BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff22857g086846
(103 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_844694 VSG (Establishment) [Trypanosoma brucei] 25 1.3
XP_818396 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.4
XP_001349207 EBA-175 (Adhesin) [Plasmodium falciparum] 22 8.4
XP_816853 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 8.9
>M.Javanica_Scaff22857g086846 on XP_844694 VSG (Establishment) [Trypanosoma brucei]
Length = 491
Score = 24.6 bits (52), Expect = 1.3, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 51 DESDVEPPANYG-GYESDSSIDSLAGINVDNLPDIPIDIDDDD 92
D+SD A + SD SI+ L NV+N+P I D+ D
Sbjct: 316 DDSDTTLAAKVKKAFGSDESINKLISTNVNNMPIAGILTDNTD 358
>M.Javanica_Scaff22857g086846 on XP_818396 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1044
Score = 23.1 bits (48), Expect = 4.4, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Query: 27 DNDDECSSYFGSDDENDTDT--ESDTDESDVEPPANYGGYESDSS 69
D D GS D+D+ +DTD + V+ + G +SDSS
Sbjct: 943 DTDSAKVKAIGSSAGEDSDSSGAADTDSAKVKATGSSAGEDSDSS 987
Score = 23.1 bits (48), Expect = 4.9, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Query: 19 FITKNVY----CDNDDECSSYFGSDDENDTDTESDTDESDVEPPANYGGYESDSS 69
F +NV C ND E ++ +D +D+ +DTD + + G +SDSS
Sbjct: 670 FTVRNVLLYGRCFNDSEVAALEKRED-SDSSGAADTDSAKGKATGGSAGEDSDSS 723
Score = 22.3 bits (46), Expect = 8.2, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 40 DENDTDTESDTDESDVEPPANYGGYESDSS 69
+++D+ +DTD + V+ + G +SDSS
Sbjct: 934 EDSDSSGAADTDSAKVKAIGSSAGEDSDSS 963
>M.Javanica_Scaff22857g086846 on XP_001349207 EBA-175 (Adhesin) [Plasmodium falciparum]
Length = 1462
Score = 22.3 bits (46), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 21 TKNVYCDNDDECSSYFGSDDE 41
T+N+ C D C SYF D E
Sbjct: 1377 TRNLCCAVSDYCMSYFTYDSE 1397
>M.Javanica_Scaff22857g086846 on XP_816853 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1044
Score = 22.3 bits (46), Expect = 8.9, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 28 NDDECSSYFGSDDENDTDTESDTDESDVEPPANYGGYESDSSI 70
N +E ++ +E+DTD + D D P A+ + SS+
Sbjct: 738 NSEESATSHDELNESDTDEQGDNSVDDPVPAASSSTVVAGSSV 780
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff176g003006
(78 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff24209g088999
(55 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_804688 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 0.48
XP_816852 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 0.56
XP_816855 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 0.58
XP_804895 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.1
XP_808081 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 1.9
XP_805359 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 2.1
XP_815842 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 2.7
EAA36893 PAT (Others) [Giardia duodenalis] 22 4.1
XP_807111 Trans-sialidase (Invasion) [Trypanosoma cruzi] 21 4.6
XP_808396 Trans-sialidase (Invasion) [Trypanosoma cruzi] 21 4.8
XP_809996 Trans-sialidase (Invasion) [Trypanosoma cruzi] 21 7.1
XP_804332 Trans-sialidase (Invasion) [Trypanosoma cruzi] 20 9.5
>M.Javanica_Scaff24209g088999 on XP_804688 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 704
Score = 24.3 bits (51), Expect = 0.48, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 1 MHVQNLHWVVVEDANHTLQLLKKNFSKRSKIPYTYFYTTQN 41
+HV+ L +E L + + NFS ++K Y + T N
Sbjct: 375 LHVEALITATIEGRKVMLYIQRGNFSGKNKANALYLWVTDN 415
>M.Javanica_Scaff24209g088999 on XP_816852 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 739
Score = 23.9 bits (50), Expect = 0.56, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 1 MHVQNLHWVVVEDANHTLQLLKKNFSKRSKIPYTYFYTTQN 41
+HV+ L +E L + + NFS ++K Y + T N
Sbjct: 374 LHVEALITATIEGRKVMLYIQRGNFSGKNKANPLYLWVTDN 414
>M.Javanica_Scaff24209g088999 on XP_816855 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 754
Score = 23.9 bits (50), Expect = 0.58, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 1 MHVQNLHWVVVEDANHTLQLLKKNFSKRSKIPYTYFYTTQN 41
+HV+ L +E L + + NFS ++K Y + T N
Sbjct: 336 LHVEALITATIEGRKVMLYIQRGNFSGKNKANPLYLWVTDN 376
>M.Javanica_Scaff24209g088999 on XP_804895 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 787
Score = 23.1 bits (48), Expect = 1.1, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 1 MHVQNLHWVVVEDANHTLQLLKKNFSKRSKIPYTYFYTT 39
+HV+ L +E+ L + + NFS ++K Y + T
Sbjct: 374 LHVEALITAAIEEKKVMLYIQRGNFSGKNKANPLYLWVT 412
>M.Javanica_Scaff24209g088999 on XP_808081 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 893
Score = 22.3 bits (46), Expect = 1.9, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 10 VVEDANHTLQLLKKNFSKRSKI 31
+++DAN Q L+K+ S SK+
Sbjct: 141 IMKDANTKTQFLEKSTSPNSKV 162
>M.Javanica_Scaff24209g088999 on XP_805359 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 788
Score = 22.3 bits (46), Expect = 2.1, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 1 MHVQNLHWVVVEDANHTLQLLKKNFSKRSKIPYTYFYTTQN 41
+HV+ L +E L + + NFS ++K + + T N
Sbjct: 374 LHVEALITATIEGRKVMLYIQRGNFSGKNKANPLFLWVTDN 414
>M.Javanica_Scaff24209g088999 on XP_815842 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 894
Score = 21.9 bits (45), Expect = 2.7, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 10 VVEDANHTLQLLKKNFSKRSKI 31
V++DA Q L+K S+R+K+
Sbjct: 136 VMKDAKKKTQFLEKEGSERNKV 157
>M.Javanica_Scaff24209g088999 on EAA36893 PAT (Others) [Giardia duodenalis]
Length = 255
Score = 21.6 bits (44), Expect = 4.1, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 5 NLHWVVVEDANHTLQLLKKNFSKRSKIPYTYFYT 38
N+H +++ + T++ K SK S YT YT
Sbjct: 194 NMHVIMIRNNMTTIEYFKWKDSKASLQHYTNHYT 227
>M.Javanica_Scaff24209g088999 on XP_807111 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 794
Score = 21.2 bits (43), Expect = 4.6, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 17/41 (41%)
Query: 1 MHVQNLHWVVVEDANHTLQLLKKNFSKRSKIPYTYFYTTQN 41
+HV+ L +E L + + NFS Y + T N
Sbjct: 378 LHVEALITATIEGRKVMLYIQRGNFSGEGNATALYLWVTDN 418
>M.Javanica_Scaff24209g088999 on XP_808396 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 786
Score = 21.2 bits (43), Expect = 4.8, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 17/41 (41%)
Query: 1 MHVQNLHWVVVEDANHTLQLLKKNFSKRSKIPYTYFYTTQN 41
+HV L +E L + NFS+ + Y + T N
Sbjct: 371 LHVDALITATIEGRKVMLYTQRGNFSREEEANALYLWVTDN 411
>M.Javanica_Scaff24209g088999 on XP_809996 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 787
Score = 20.8 bits (42), Expect = 7.1, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 17/41 (41%)
Query: 1 MHVQNLHWVVVEDANHTLQLLKKNFSKRSKIPYTYFYTTQN 41
+HV L +E L + NFS+ + Y + T N
Sbjct: 372 LHVDALITATIEGRKVMLYTQRGNFSREEEANALYVWVTDN 412
>M.Javanica_Scaff24209g088999 on XP_804332 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 613
Score = 20.4 bits (41), Expect = 9.5, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 1 MHVQNLHWVVVEDANHTLQLLKKNFSKRSKIPYTYFYTTQN 41
+HV L +E L + NFS ++K Y T N
Sbjct: 391 LHVDALITATIEGRKVMLYTQRGNFSGKNKANPLYLLVTDN 431
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff23717g088231
(56 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_966151 TLP (Invasion) [Plasmodium falciparum] 21 6.0
>M.Javanica_Scaff23717g088231 on XP_966151 TLP (Invasion) [Plasmodium falciparum]
Length = 1371
Score = 21.2 bits (43), Expect = 6.0, Method: Composition-based stats.
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 26 SKKYENEIKRDTRSLKKHEI 45
S Y NE++R RSL EI
Sbjct: 1068 SSNYNNELQRTKRSLDFPEI 1087
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2060g020352
(61 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350796 PfEMP1 (Establishment) [Plasmodium falciparum] 23 0.99
XP_001611442 variant erythrocyte surface antigen-1, alpha subun... 22 2.4
XP_001611737 variant erythrocyte surface antigen-1, beta subuni... 22 4.4
>M.Javanica_Scaff2060g020352 on XP_001350796 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2646
Score = 23.5 bits (49), Expect = 0.99, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 32 DPSKLPGCSLNCCADGVCVCKKSYCNTCTC 61
D K+ LNC +G C N CTC
Sbjct: 1933 DYKKIKHKFLNCTKNGQSKCINGCNNKCTC 1962
>M.Javanica_Scaff2060g020352 on XP_001611442 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1350
Score = 22.3 bits (46), Expect = 2.4, Method: Composition-based stats.
Identities = 9/28 (32%), Positives = 12/28 (42%), Gaps = 6/28 (21%)
Query: 39 CSLNCCADGVCVCK------KSYCNTCT 60
C +C G C C K YC +C+
Sbjct: 238 CESDCTTSGKCKCAGKGKCCKCYCTSCS 265
>M.Javanica_Scaff2060g020352 on XP_001611737 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1139
Score = 21.6 bits (44), Expect = 4.4, Method: Composition-based stats.
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 42 NCCADGVCVCKKSYCNTC 59
NCC+ GV C+TC
Sbjct: 173 NCCSTGVPSTPCHQCSTC 190
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff19085g080094
(117 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_806729 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.7
AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 4.5
>M.Javanica_Scaff19085g080094 on XP_806729 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 499
Score = 24.3 bits (51), Expect = 2.7, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Query: 25 SELIEIENDRHFKEVNAKKLELEFPEE 51
SEL+E D+ KE++ KL+ + PEE
Sbjct: 131 SELLEW-TDKESKELDTTKLKTQAPEE 156
>M.Javanica_Scaff19085g080094 on AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2965
Score = 23.5 bits (49), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 10 FIVFLPCTLLSIKEDSELIEIENDRHFKEVNAKKLELEFPEELN-----------LIIGV 58
F V+ + L +E ELI ++ D + E + L L P++ + ++ +
Sbjct: 141 FDVYKDTSFLKNREYKELITMQYDYAYLEATKEVLYL-IPKDKDYHKFYKNKLEKILFNL 199
Query: 59 KEEIQFTYRGYLHSQLELI-FDFDHNILN 86
K+ ++ GY+ S+LE+I D D +ILN
Sbjct: 200 KDSLKLLREGYIQSKLEMIRIDSDIDILN 228
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2118g020799
(88 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609449 variant erythrocyte surface antigen-1, beta subuni... 22 6.9
AAY44836 MSA-1 (Invasion) [Babesia bovis] 22 8.9
AAY44828 MSA-1 (Invasion) [Babesia bovis] 22 9.3
>M.Javanica_Scaff2118g020799 on XP_001609449 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 776
Score = 22.3 bits (46), Expect = 6.9, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 45 SKCIPDYQNLSIYDFEVETLEGEFKDLSAYKGQPLLVVNV 84
+K + +Y + SIYD E L+ + K S PLLV+++
Sbjct: 322 NKSVAEYYS-SIYDKAKEALKKDNKTESICNDYPLLVLHI 360
>M.Javanica_Scaff2118g020799 on AAY44836 MSA-1 (Invasion) [Babesia bovis]
Length = 310
Score = 21.9 bits (45), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 10/54 (18%)
Query: 5 LTFIAIITTCCAISANKQISPTKKEKYQPGPKLIDETTRWSKCIPDYQNLSIYD 58
+TF IT C +SA ++ T+ E Q +L+D + PD +YD
Sbjct: 2 VTFSLFITALCCVSA---VTSTEPESTQSFDRLVDSS-------PDAPEGFLYD 45
>M.Javanica_Scaff2118g020799 on AAY44828 MSA-1 (Invasion) [Babesia bovis]
Length = 311
Score = 21.6 bits (44), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 10/54 (18%)
Query: 5 LTFIAIITTCCAISANKQISPTKKEKYQPGPKLIDETTRWSKCIPDYQNLSIYD 58
+TF IT C +SA ++ T+ E Q +L+D + PD +YD
Sbjct: 2 VTFSLFITALCCVSA---VTSTEPESTQSFDRLVDSS-------PDAPEGFLYD 45
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff20232g082287
(158 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2293g021967
(267 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff24066g088761
(287 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAK58479 MIC12 (Others) [Toxoplasma gondii] 33 0.015
XP_802391 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.8
XP_001609566 variant erythrocyte surface antigen-1, beta subuni... 26 3.8
>M.Javanica_Scaff24066g088761 on AAK58479 MIC12 (Others) [Toxoplasma gondii]
Length = 255
Score = 32.7 bits (73), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 11/69 (15%)
Query: 199 QQIPSGNYRPPQFPQTLDEIQWVQQIPSGNYRPPQFPQT------LDEIQWV--QQIPSG 250
++IP G + P +FP+ +++P G + P +FP+ L E + V ++IP G
Sbjct: 36 EEIPEGEHVPEEFPEGE---HIPEELPEGEHIPEEFPEGEHIPEELPEGEHVPEEEIPEG 92
Query: 251 NYRPPQFPQ 259
+ P +FP+
Sbjct: 93 EHIPEEFPE 101
Score = 32.0 bits (71), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 12/70 (17%)
Query: 199 QQIPSGNYRPPQFPQT-------LDEIQWV--QQIPSGNYRPPQFPQTLDEIQWVQQIPS 249
++IP G + P +FP+ + E + V ++IP G + P +FP+ +++P
Sbjct: 4 EEIPEGEHVPEEFPEGEHVPEEEIPEGEHVPEEEIPEGEHVPEEFPEGE---HIPEELPE 60
Query: 250 GNYRPPQFPQ 259
G + P +FP+
Sbjct: 61 GEHIPEEFPE 70
Score = 25.8 bits (55), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 15/73 (20%)
Query: 189 PQTLDEIQWV--QQIPSGNYRPPQFPQTLDEIQWV--QQIPSGNYRP-PQFPQTLDEIQW 243
P+ L E + V ++IP G + P +FP+ + V ++IP G + P +FP+ +
Sbjct: 75 PEELPEGEHVPEEEIPEGEHIPEEFPEG----EHVPEEEIPEGEHIPEEEFPEG----EH 126
Query: 244 V--QQIPSGNYRP 254
V ++IP G + P
Sbjct: 127 VPEEEIPEGEHVP 139
>M.Javanica_Scaff24066g088761 on XP_802391 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 198
Score = 25.4 bits (54), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 202 PSGNYRPPQFPQTLDEIQWVQQIPSGNYRPPQFPQTLD 239
PSG P+ + D I W ++ + + PQT+D
Sbjct: 92 PSGIDAEPRSAEDTDNISWTERAEFSSGEGKEVPQTVD 129
Score = 25.4 bits (54), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 225 PSGNYRPPQFPQTLDEIQWVQQIPSGNYRPPQFPQTLD 262
PSG P+ + D I W ++ + + PQT+D
Sbjct: 92 PSGIDAEPRSAEDTDNISWTERAEFSSGEGKEVPQTVD 129
>M.Javanica_Scaff24066g088761 on XP_001609566 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1062
Score = 25.8 bits (55), Expect = 3.8, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Query: 188 YPQTLDEIQWVQQIPSGNYRPP--QFPQ 213
YP+ ++ I P G++ PP +FPQ
Sbjct: 647 YPEIIEHINTKDDNPKGHFDPPLLKFPQ 674
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff16200g074042
(126 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff23505g087909
(73 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_815706 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.010
XP_815707 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.010
Q9XZD5 TgPrx2 (Others) [Toxoplasma gondii] 23 3.1
>M.Javanica_Scaff23505g087909 on XP_815706 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 907
Score = 29.6 bits (65), Expect = 0.010, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 4 PQKSHPQRSHPQXHLYSTEYPQ---MSDPQKSHPQRSHPQRSRPQKSHPQKS 52
P + PQ + Q L ++ P +S+P S P+ P SRP++ P +S
Sbjct: 728 PATAGPQPTD-QKSLSASSVPSGGALSEPAASRPEEPEPAESRPEEPEPAES 778
Score = 27.7 bits (60), Expect = 0.046, Method: Composition-based stats.
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 24 PQMSDPQKSHPQRSHPQRSRPQKSHPQK 51
P+ +P +S P+ P SRP++ P +
Sbjct: 760 PEEPEPAESRPEEPEPAESRPEEPEPAR 787
Score = 26.2 bits (56), Expect = 0.18, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Query: 5 QKSHPQRSHPQXHLYSTEYPQMSDPQKSHPQRSHPQRSRPQKSHPQK 51
QKS S P S P S P++ P S P+ P +S P++
Sbjct: 738 QKSLSASSVPSGGALSE--PAASRPEEPEPAESRPEEPEPAESRPEE 782
Score = 25.0 bits (53), Expect = 0.39, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 5/41 (12%)
Query: 1 MSDPQKSHPQRSHPQXHLYSTEYPQMSDPQKSHPQRSHPQR 41
+S+P S P+ P + P+ +P +S P+ P R
Sbjct: 752 LSEPAASRPEEPEP-----AESRPEEPEPAESRPEEPEPAR 787
>M.Javanica_Scaff23505g087909 on XP_815707 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 907
Score = 29.6 bits (65), Expect = 0.010, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 4 PQKSHPQRSHPQXHLYSTEYPQ---MSDPQKSHPQRSHPQRSRPQKSHPQKS 52
P + PQ + Q L ++ P +S+P S P+ P SRP++ P +S
Sbjct: 728 PATAGPQPTD-QKSLSASSVPSGGALSEPAASRPEEPEPAESRPEEPEPAES 778
Score = 27.7 bits (60), Expect = 0.046, Method: Composition-based stats.
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 24 PQMSDPQKSHPQRSHPQRSRPQKSHPQK 51
P+ +P +S P+ P SRP++ P +
Sbjct: 760 PEEPEPAESRPEEPEPAESRPEEPEPAR 787
Score = 26.2 bits (56), Expect = 0.18, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Query: 5 QKSHPQRSHPQXHLYSTEYPQMSDPQKSHPQRSHPQRSRPQKSHPQK 51
QKS S P S P S P++ P S P+ P +S P++
Sbjct: 738 QKSLSASSVPSGGALSE--PAASRPEEPEPAESRPEEPEPAESRPEE 782
Score = 25.0 bits (53), Expect = 0.39, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 5/41 (12%)
Query: 1 MSDPQKSHPQRSHPQXHLYSTEYPQMSDPQKSHPQRSHPQR 41
+S+P S P+ P + P+ +P +S P+ P R
Sbjct: 752 LSEPAASRPEEPEP-----AESRPEEPEPAESRPEEPEPAR 787
>M.Javanica_Scaff23505g087909 on Q9XZD5 TgPrx2 (Others) [Toxoplasma gondii]
Length = 255
Score = 22.7 bits (47), Expect = 3.1, Method: Composition-based stats.
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 4 PQKSHPQRSHPQXHLY 19
P H Q+ HPQ HL+
Sbjct: 151 PDFIHTQKRHPQTHLH 166
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1838g018742
(292 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_810574 Trans-sialidase (Invasion) [Trypanosoma cruzi] 32 0.050
XP_001351561 PfEMP1 (Establishment) [Plasmodium falciparum] 30 0.13
XP_001348946 PfEMP1 (Establishment) [Plasmodium falciparum] 30 0.13
XP_804330 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.18
XP_815706 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.49
XP_815707 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.49
XP_817816 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.92
XP_813726 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.2
XP_810140 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.8
XP_810391 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.7
XP_807541 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 3.6
XP_816643 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 3.8
>M.Javanica_Scaff1838g018742 on XP_810574 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 954
Score = 31.6 bits (70), Expect = 0.050, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 8/61 (13%)
Query: 228 TPPPNQFPPVTTPLTTTTTPQPTPPTTT-------TTPSPTTTTP-PYKPPPCHHGKCPE 279
T PP + PV TTT+P P TT+ T PSP T P P + + P
Sbjct: 724 TIPPPERKPVPAKALTTTSPPVEPLTTSVTTEMQPTVPSPATAGPQPTEQATLNGSSVPS 783
Query: 280 G 280
G
Sbjct: 784 G 784
>M.Javanica_Scaff1838g018742 on XP_001351561 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3553
Score = 30.4 bits (67), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 18/45 (40%)
Query: 235 PPVTTPLTTTTTPQPTPPTTTTTPSPTTTTPPYKPPPCHHGKCPE 279
PP T P + T T TTP+ +T Y H G C E
Sbjct: 1148 PPATHPYKSVNTRDKRDATDDTTPTVYSTAAGYVHQEAHIGDCKE 1192
>M.Javanica_Scaff1838g018742 on XP_001348946 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3553
Score = 30.4 bits (67), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 18/45 (40%)
Query: 235 PPVTTPLTTTTTPQPTPPTTTTTPSPTTTTPPYKPPPCHHGKCPE 279
PP T P + T T TTP+ +T Y H G C E
Sbjct: 1148 PPATHPYKSVNTRDKRDATDDTTPTVYSTAAGYVHQEAHIGDCKE 1192
>M.Javanica_Scaff1838g018742 on XP_804330 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 910
Score = 30.0 bits (66), Expect = 0.18, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
Query: 228 TPPPNQFPPVTTPLTTTTTPQPTPPTTTTTPSPTTTTPPYKPPPCHHGKCP 278
T PP + PV TTT+ P TT S TT T P P P G P
Sbjct: 691 TIPPPERKPVPAKALTTTSSSVEPLTT----SVTTETQPTVPSPTPAGPQP 737
>M.Javanica_Scaff1838g018742 on XP_815706 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 907
Score = 28.5 bits (62), Expect = 0.49, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
Query: 229 PPPNQFP-PVTTPLTTTTTPQPTPP---TTTTTPSPTTTTP 265
PPP + P P +++ P TP T T PSP T P
Sbjct: 693 PPPERKPVPAAAATSSSVEPLTTPAAKNTQPTVPSPATAGP 733
>M.Javanica_Scaff1838g018742 on XP_815707 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 907
Score = 28.5 bits (62), Expect = 0.49, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
Query: 229 PPPNQFP-PVTTPLTTTTTPQPTPP---TTTTTPSPTTTTP 265
PPP + P P +++ P TP T T PSP T P
Sbjct: 693 PPPERKPVPAAAATSSSVEPLTTPAAKNTQPTVPSPATAGP 733
>M.Javanica_Scaff1838g018742 on XP_817816 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 912
Score = 27.7 bits (60), Expect = 0.92, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 23/51 (45%)
Query: 226 DYTPPPNQFPPVTTPLTTTTTPQPTPPTTTTTPSPTTTTPPYKPPPCHHGK 276
D TP + P T+ +++ + P+PP T T++ P + G+
Sbjct: 739 DSTPSLEENPLETSTVSSASIIPPSPPVTPNAQKTETSSTPAETQLTEQGQ 789
>M.Javanica_Scaff1838g018742 on XP_813726 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 924
Score = 27.3 bits (59), Expect = 1.2, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Query: 243 TTTTPQPTPPTTTTTP--SPTTTTPP 266
T T P+P P T+TTP SP + P
Sbjct: 730 TITIPKPEDPNTSTTPPRSPAVSGLP 755
>M.Javanica_Scaff1838g018742 on XP_810140 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 923
Score = 26.9 bits (58), Expect = 1.8, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Query: 228 TPPPNQFPPVTTPLTTTTTPQPTPPTTTTTPSPTTTTP-PYKPPP 271
T PP + PV T+ + P TT PT P P P P
Sbjct: 688 TIPPPERKPVPAAAATSPSVGPANERMTTNTQPTAPAPTPAGPQP 732
>M.Javanica_Scaff1838g018742 on XP_810391 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 885
Score = 26.2 bits (56), Expect = 2.7, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 18/43 (41%)
Query: 228 TPPPNQFPPVTTPLTTTTTPQPTPPTTTTTPSPTTTTPPYKPP 270
T PP + PV T+++ + TT PT +P P
Sbjct: 689 TIPPPERKPVPAAAATSSSVESANERVTTNTQPTVPSPATAGP 731
>M.Javanica_Scaff1838g018742 on XP_807541 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 920
Score = 25.8 bits (55), Expect = 3.6, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 18/43 (41%)
Query: 228 TPPPNQFPPVTTPLTTTTTPQPTPPTTTTTPSPTTTTPPYKPP 270
T PP + PV T+++ + T T PT +P P
Sbjct: 691 TIPPPERKPVPAAAATSSSVESASDTVATNTQPTVPSPVAAGP 733
>M.Javanica_Scaff1838g018742 on XP_816643 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 904
Score = 25.8 bits (55), Expect = 3.8, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 18/43 (41%)
Query: 228 TPPPNQFPPVTTPLTTTTTPQPTPPTTTTTPSPTTTTPPYKPP 270
T PP + PV T+++ + T T PT +P P
Sbjct: 689 TIPPPERKPVPAAAATSSSVESASDTVATNTQPTVPSPVAAGP 731
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff23370g087674
(64 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609751 variant erythrocyte surface antigen-1, alpha subun... 25 0.47
XP_001610714 variant erythrocyte surface antigen-1, alpha subun... 22 3.2
AAW78150 TRAP (Invasion) [Plasmodium falciparum] 21 7.7
XP_001351514 PfEMP1 (Establishment) [Plasmodium falciparum] 21 8.7
XP_001351515 PfEMP1 (Establishment) [Plasmodium falciparum] 21 9.2
AAW78175 TRAP (Invasion) [Plasmodium falciparum] 21 9.6
AAA29778 TRAP (Invasion) [Plasmodium falciparum] 21 9.7
AAA29772 TRAP (Invasion) [Plasmodium falciparum] 21 9.8
>M.Javanica_Scaff23370g087674 on XP_001609751 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1298
Score = 24.6 bits (52), Expect = 0.47, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 26 QQFLPLTQNILNENTSHSRQRSRKQQHPSTQ 56
+FL Q+++ + + + +K QHP T+
Sbjct: 1188 HEFLDSLQDVIKKKEEEASSKDQKDQHPLTK 1218
>M.Javanica_Scaff23370g087674 on XP_001610714 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1231
Score = 22.3 bits (46), Expect = 3.2, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 26 QQFLPLTQNILNENTSHSRQRSRKQQHPSTQ 56
QFL ++++N + Q+ + +HP T+
Sbjct: 1122 HQFLDSLAVVIDKNKQAASQQDQDNKHPLTE 1152
>M.Javanica_Scaff23370g087674 on AAW78150 TRAP (Invasion) [Plasmodium falciparum]
Length = 569
Score = 21.2 bits (43), Expect = 7.7, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 22 NHQQQQFLPLTQNILNENTSHSRQRSRKQQHPSTQQ 57
N + ++ P +N NEN S++R+ + +HP ++
Sbjct: 475 NSEDRETRPHGRN--NENRSYNRKHNNTPKHPEREE 508
>M.Javanica_Scaff23370g087674 on XP_001351514 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2201
Score = 21.2 bits (43), Expect = 8.7, Method: Composition-based stats.
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 10 PSTSAYADNINSNHQQQ 26
P+ + +NIN NHQ Q
Sbjct: 2144 PNLNLVENNINPNHQNQ 2160
>M.Javanica_Scaff23370g087674 on XP_001351515 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2181
Score = 20.8 bits (42), Expect = 9.2, Method: Composition-based stats.
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 10 PSTSAYADNINSNHQQQ 26
P+ + +NIN NHQ Q
Sbjct: 2124 PNLNLVENNINPNHQNQ 2140
>M.Javanica_Scaff23370g087674 on AAW78175 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 20.8 bits (42), Expect = 9.6, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 22 NHQQQQFLPLTQNILNENTSHSRQRSRKQQHPSTQQ 57
N + ++ P +N NEN S++R+ + +HP ++
Sbjct: 448 NSEDRETRPHGRN--NENRSYNRKHNNTPKHPEREE 481
>M.Javanica_Scaff23370g087674 on AAA29778 TRAP (Invasion) [Plasmodium falciparum]
Length = 562
Score = 20.8 bits (42), Expect = 9.7, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 22 NHQQQQFLPLTQNILNENTSHSRQRSRKQQHPSTQQ 57
N + ++ P +N NEN S++R+ + +HP ++
Sbjct: 448 NSEDRETRPHGRN--NENRSYNRKHNNTPKHPEREE 481
>M.Javanica_Scaff23370g087674 on AAA29772 TRAP (Invasion) [Plasmodium falciparum]
Length = 565
Score = 20.8 bits (42), Expect = 9.8, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 22 NHQQQQFLPLTQNILNENTSHSRQRSRKQQHPSTQQ 57
N + ++ P +N NEN S++R+ + +HP ++
Sbjct: 451 NSEDRETRPHGRN--NENRSYNRKHNNTPKHPEREE 484
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2071g020429
(55 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351079 PfEMP1 (Establishment) [Plasmodium falciparum] 23 0.69
XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum] 23 1.4
XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum] 23 1.4
XP_001351319 PfEMP1 (Establishment) [Plasmodium falciparum] 23 1.4
XP_001347288 PfEMP1 (Establishment) [Plasmodium falciparum] 23 1.6
XP_001349219 PfEMP1 (Establishment) [Plasmodium falciparum] 22 2.5
>M.Javanica_Scaff2071g020429 on XP_001351079 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2203
Score = 23.5 bits (49), Expect = 0.69, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 30 RNRTSSKPSTTTSNNNSEYSTNSRIA 55
+N T+S +TT S NN+ S N+ A
Sbjct: 1870 KNTTASGNNTTASGNNTTASGNNTTA 1895
>M.Javanica_Scaff2071g020429 on XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2238
Score = 22.7 bits (47), Expect = 1.4, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 31 NRTSSKPSTTTSNNNSEYSTNSRIA 55
N T+S +TT S NN+ S N+ A
Sbjct: 1861 NTTASGNNTTASGNNTTASGNNTTA 1885
Score = 22.7 bits (47), Expect = 1.4, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 31 NRTSSKPSTTTSNNNSEYSTNSRIA 55
N T+S +TT S NN+ S N+ A
Sbjct: 1868 NTTASGNNTTASGNNTTASGNNTTA 1892
>M.Javanica_Scaff2071g020429 on XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2264
Score = 22.7 bits (47), Expect = 1.4, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 31 NRTSSKPSTTTSNNNSEYSTNSRIA 55
N T+S +TT S NN+ S N+ A
Sbjct: 1898 NTTASGNNTTASGNNTTASGNNTTA 1922
>M.Javanica_Scaff2071g020429 on XP_001351319 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2646
Score = 22.7 bits (47), Expect = 1.4, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 31 NRTSSKPSTTTSNNNSEYSTNSRIA 55
N T+S +TT S NN+ S N+ A
Sbjct: 2293 NTTASGNNTTASGNNTTASGNNTTA 2317
>M.Javanica_Scaff2071g020429 on XP_001347288 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2241
Score = 22.7 bits (47), Expect = 1.6, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 31 NRTSSKPSTTTSNNNSEYSTNSRIA 55
N T+S +TT S NN+ S N+ A
Sbjct: 1904 NTTASGNNTTASGNNTTASGNNTTA 1928
Score = 22.7 bits (47), Expect = 1.6, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 31 NRTSSKPSTTTSNNNSEYSTNSRIA 55
N T+S +TT S NN+ S N+ A
Sbjct: 1911 NTTASGNNTTASGNNTTASGNNTTA 1935
>M.Javanica_Scaff2071g020429 on XP_001349219 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2595
Score = 21.9 bits (45), Expect = 2.5, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 31 NRTSSKPSTTTSNNNSEYSTNSRIA 55
N T+S +TT S NN+ S N+ A
Sbjct: 2217 NTTASGNNTTASGNNTTASGNNTTA 2241
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1892g019117
(83 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_816557 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 6.9
>M.Javanica_Scaff1892g019117 on XP_816557 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 834
Score = 21.9 bits (45), Expect = 6.9, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 33 VCSGSDPATLQLENYSRQKKVSG 55
+C GS AT Q+EN + SG
Sbjct: 56 MCCGSGAATAQVENNAVASTPSG 78
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff163g002834
(63 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001348153 MAEBL (Adhesin) [Plasmodium falciparum] 22 4.7
XP_845634 VSG (Establishment) [Trypanosoma brucei] 21 8.1
>M.Javanica_Scaff163g002834 on XP_001348153 MAEBL (Adhesin) [Plasmodium falciparum]
Length = 2054
Score = 21.6 bits (44), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 4 SCYLFIVFLTHHISKICCVVA 24
SC+L + L +H +K C ++
Sbjct: 252 SCFLNLPILFNHQTKECVIIG 272
>M.Javanica_Scaff163g002834 on XP_845634 VSG (Establishment) [Trypanosoma brucei]
Length = 461
Score = 21.2 bits (43), Expect = 8.1, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 15/33 (45%)
Query: 31 LAYITRERQSNNNHHRINYRKQCHVFRTKTALE 63
L + R + N H + + C++F K A +
Sbjct: 11 LCILLRNANAAKNQHAVEFGALCNLFTLKDAAD 43
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff17846g077534
(193 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1702g017723
(212 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351319 PfEMP1 (Establishment) [Plasmodium falciparum] 24 9.9
>M.Javanica_Scaff1702g017723 on XP_001351319 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2646
Score = 23.9 bits (50), Expect = 9.9, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Query: 166 RCPRYKTYVVCQYRPAGNVITRCVYNV---GEPCSGCPNNCNQTSK 208
R P+YKT + P+GN T N G + NN + K
Sbjct: 2275 RAPKYKTLIEVVLEPSGNNTTASGNNTTASGNNTTASGNNTTASGK 2320
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1660g017402
(214 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349034 PfEMP1 (Establishment) [Plasmodium falciparum] 27 1.1
XP_001351876 PfEMP1 (Establishment) [Plasmodium falciparum] 27 1.2
XP_001351080 PfEMP1 (Establishment) [Plasmodium falciparum] 27 1.3
ABR92029 MSA-1 (Invasion) [Babesia bovis] 25 3.6
ABR92031 MSA-1 (Invasion) [Babesia bovis] 25 3.6
ABR92027 MSA-1 (Invasion) [Babesia bovis] 25 3.6
>M.Javanica_Scaff1660g017402 on XP_001349034 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 26.9 bits (58), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 137 CAQIYFFWHLYDIDYEKLNREGRPLLYKNNTFDA 170
+ +F WH Y + +K G PLL ++ D
Sbjct: 999 AVETFFLWHRYKEEKKKPQEGGLPLLGTGDSVDG 1032
>M.Javanica_Scaff1660g017402 on XP_001351876 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3164
Score = 26.9 bits (58), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 146 LYDIDYEKLNREGRPLLYKNNTFDALKNYIINLRK 180
L+DI +K P+ KN+T+D ++N++ L+K
Sbjct: 2798 LFDIQSKKYKELYEPIDTKNSTYDHVENFVQKLKK 2832
>M.Javanica_Scaff1660g017402 on XP_001351080 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2209
Score = 26.6 bits (57), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 137 CAQIYFFWHLYDIDYEKLNRE--GRPLL 162
+ +F WH Y +D EK ++E GR ++
Sbjct: 971 AVETFFLWHKYKVDKEKEDKEKNGRNMV 998
>M.Javanica_Scaff1660g017402 on ABR92029 MSA-1 (Invasion) [Babesia bovis]
Length = 330
Score = 25.0 bits (53), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 131 TDGFRNCAQIYFFWHLYDIDYEKLNREGRPLLYKN 165
T+G R A+ YF H+Y +Y K+N EG + K
Sbjct: 153 TEGDRKKAEEYFKKHVYKEEY-KVNVEGMAAVCKG 186
>M.Javanica_Scaff1660g017402 on ABR92031 MSA-1 (Invasion) [Babesia bovis]
Length = 330
Score = 25.0 bits (53), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 131 TDGFRNCAQIYFFWHLYDIDYEKLNREGRPLLYKN 165
T+G R A+ YF H+Y +Y K+N EG + K
Sbjct: 153 TEGDRKKAEEYFKKHVYKEEY-KVNVEGMAAVCKG 186
>M.Javanica_Scaff1660g017402 on ABR92027 MSA-1 (Invasion) [Babesia bovis]
Length = 330
Score = 25.0 bits (53), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 131 TDGFRNCAQIYFFWHLYDIDYEKLNREGRPLLYKN 165
T+G R A+ YF H+Y +Y K+N EG + K
Sbjct: 153 TEGDRKKAEEYFKKHVYKEEY-KVNVEGMAAVCKG 186
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff21764g085020
(148 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_806989 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.1
XP_804569 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.3
>M.Javanica_Scaff21764g085020 on XP_806989 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 922
Score = 25.0 bits (53), Expect = 2.1, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Query: 46 DGQK---ISYTKYADNKGKEVAKRRVFVERMERM 76
DGQK +S YA+ GKE + +++ M+R+
Sbjct: 332 DGQKYILVSRPVYAEKNGKETGRLHLWLTDMQRI 365
>M.Javanica_Scaff21764g085020 on XP_804569 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 689
Score = 25.0 bits (53), Expect = 2.3, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Query: 46 DGQK---ISYTKYADNKGKEVAKRRVFVERMERM 76
DGQK +S YA+ GKE + +++ M+R+
Sbjct: 76 DGQKYILVSRPVYAEKNGKETGRLHLWLTDMQRI 109
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff16269g074206
(79 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609040 variant erythrocyte surface antigen-1, alpha subun... 22 7.4
XP_001609315 variant erythrocyte surface antigen-1, alpha subun... 22 7.4
>M.Javanica_Scaff16269g074206 on XP_001609040 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1335
Score = 21.9 bits (45), Expect = 7.4, Method: Composition-based stats.
Identities = 9/18 (50%), Positives = 10/18 (55%), Gaps = 1/18 (5%)
Query: 62 DC-CDGSCGCVTCCYYSS 78
DC CD CGC Y S+
Sbjct: 211 DCKCDRKCGCTIDTYRSA 228
>M.Javanica_Scaff16269g074206 on XP_001609315 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1338
Score = 21.9 bits (45), Expect = 7.4, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 11/23 (47%)
Query: 46 EHLMSKFKRHRYGGCCDCCDGSC 68
E L S+FK GC DC C
Sbjct: 1145 ESLASEFKEIECRGCRDCDPNKC 1167
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff16341g074373
(180 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff16945g075672
(269 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_845139 VSG (Establishment) [Trypanosoma brucei] 28 0.84
XP_001609618 variant erythrocyte surface antigen-1, alpha subun... 26 3.5
>M.Javanica_Scaff16945g075672 on XP_845139 VSG (Establishment) [Trypanosoma brucei]
Length = 533
Score = 27.7 bits (60), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Query: 80 NKLFLDSPTGQIPFAQYNGEYIDGSKNIISRAKEIIFEKQNENLENEQNLNSKKLIFKKL 139
+KLF + TGQ Q +++ +K E + + N+N + +NL K +F
Sbjct: 387 SKLFAAATTGQSSGNQPATDHLRATKEA-----ERVCKTANDNQKECENLKDKGCVFNPK 441
Query: 140 SKKGKKL 146
+GKK
Sbjct: 442 GGEGKKC 448
>M.Javanica_Scaff16945g075672 on XP_001609618 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1325
Score = 25.8 bits (55), Expect = 3.5, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 14/60 (23%)
Query: 97 NGEYIDGSKNIISRA--------KEI------IFEKQNENLENEQNLNSKKLIFKKLSKK 142
+G+ +D KN IS A KE+ + EK+ N++ NLN + F K K+
Sbjct: 777 DGKEVDPGKNKISEAINKVLEMLKEMEKQLKEVLEKEQSNMDENTNLNGHEKGFHKAIKE 836
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff17447g076703
(148 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_812607 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.2
XP_628559 gp900 (Adhesin) [Cryptosporidium parvum] 24 4.8
>M.Javanica_Scaff17447g076703 on XP_812607 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 957
Score = 25.8 bits (55), Expect = 1.2, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 102 SQQHKIPSKNIKRTGIGENGSPVILNEEQKIKADKLKK 139
++ K+ + + E G+P IL +Q+ + D LKK
Sbjct: 748 AKTMKVTAPEASKQATTEAGTPSILGGQQQTEQDPLKK 785
>M.Javanica_Scaff17447g076703 on XP_628559 gp900 (Adhesin) [Cryptosporidium parvum]
Length = 1937
Score = 23.9 bits (50), Expect = 4.8, Method: Composition-based stats.
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 114 RTGIGENGSPVILNEEQKIKADKLK 138
+ GI NG V+ +EE K +ADK K
Sbjct: 1350 KPGIPVNGGGVVPDEEAKDQADKGK 1374
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2134g020901
(171 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_813679 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.81
XP_001352170 MSP1 (Invasion) [Plasmodium falciparum] 25 2.0
>M.Javanica_Scaff2134g020901 on XP_813679 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 823
Score = 26.6 bits (57), Expect = 0.81, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 13 LKIYFTVAELFSSSNSSPISQIDWANIPTP 42
L+I V E+ ++S P +I+W I +P
Sbjct: 235 LEIKLVVGEVTKPTDSEPSKRIEWGEINSP 264
>M.Javanica_Scaff2134g020901 on XP_001352170 MSP1 (Invasion) [Plasmodium falciparum]
Length = 1720
Score = 25.4 bits (54), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 26 SNSSPISQIDWANIPTPPRFIHERNDPITYFSLQ-DYKG 63
SN+S + + + + P + E +DP+T S+ D KG
Sbjct: 937 SNASSTNTQNGVAVSSGPAVVEESHDPLTVLSISNDLKG 975
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2391g022608
(64 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_821405 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 0.86
AAS67870 Leucyl aminopeptidase (Others) [Trypanosoma brucei] 22 2.8
XP_822006 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.1
XP_804432 Trans-sialidase (Invasion) [Trypanosoma cruzi] 21 9.0
>M.Javanica_Scaff2391g022608 on XP_821405 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 851
Score = 23.9 bits (50), Expect = 0.86, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 42 GRGVVHDTSVRSTEDAGSLPAAD 64
G V H++S RS ED G++ D
Sbjct: 772 GSTVNHESSARSGEDEGTVGGTD 794
>M.Javanica_Scaff2391g022608 on AAS67870 Leucyl aminopeptidase (Others) [Trypanosoma brucei]
Length = 671
Score = 22.3 bits (46), Expect = 2.8, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 26 TKRATLTVSLIKLCSSGRGVVHDTSVRSTEDAGSLPAAD 64
T R L+V ++ + GR V+ DT +DA + AD
Sbjct: 381 TSRKGLSVEVLNTDAEGRLVLADTLTYLQKDAKLVKKAD 419
>M.Javanica_Scaff2391g022608 on XP_822006 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 845
Score = 21.9 bits (45), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 9 LTNGLRLDSHLEGCAFYTKRATLTVSLIKLCSSGRGVVHDTSVRSTEDAGSL 60
LT + +D+ + + T++VS G V H++S RS ED G++
Sbjct: 738 LTAAVVMDTPSTAVSGPVAQKTVSVS----TPGGSTVKHESSARSGEDEGTV 785
>M.Javanica_Scaff2391g022608 on XP_804432 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 799
Score = 20.8 bits (42), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 32 TVSLIKLCSSGRGVVHDTSVRSTEDA 57
T+ + SG+GVV+ + ST++
Sbjct: 292 TIVFPLMAKSGKGVVYSMIIHSTDNG 317
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff180g003081
(179 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff16451g074619
(71 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAB37326 PfSUB2 (Proteases) [Plasmodium falciparum] 26 0.17
XP_001608668 variant erythrocyte surface antigen-1, alpha subun... 22 4.4
>M.Javanica_Scaff16451g074619 on CAB37326 PfSUB2 (Proteases) [Plasmodium falciparum]
Length = 1342
Score = 26.2 bits (56), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 16 FCGSYSQKYALSNGFVKFFPKNFSEAMGFG 45
+ Y++KY ++ F F KN ++A G G
Sbjct: 770 YIPEYNEKYEMTQDFYNFMVKNPTDASGHG 799
>M.Javanica_Scaff16451g074619 on XP_001608668 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1337
Score = 21.9 bits (45), Expect = 4.4, Method: Composition-based stats.
Identities = 8/16 (50%), Positives = 9/16 (56%)
Query: 3 NHISGPEKDISKRFCG 18
+H P KD K FCG
Sbjct: 1048 DHTGEPSKDDKKYFCG 1063
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff24859g090002
(183 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_805943 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.2
XP_816729 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.5
XP_816886 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 7.0
>M.Javanica_Scaff24859g090002 on XP_805943 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 983
Score = 26.6 bits (57), Expect = 1.2, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 47/87 (54%), Gaps = 12/87 (13%)
Query: 25 QQISSQQSQQQQTCLN--IAPIISEQYQQSNCSPPQSLQHSPTIQTLNYQQNNNTGIFFS 82
Q++++Q + + + IAP+++ + QQ S P+S QH+P ++ + +G S
Sbjct: 710 QEVAAQTTNVSEPSRHPAIAPVVTPEAQQDATSSPRS-QHTPAQKS-----ESKSGPVIS 763
Query: 83 KRGGSNSLEMAETSLPLSEGGDVEEEA 109
K+ S+ + + TS + + VEEE+
Sbjct: 764 KQTSSDVI-VPPTSADMEK---VEEES 786
>M.Javanica_Scaff24859g090002 on XP_816729 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 890
Score = 24.3 bits (51), Expect = 5.5, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 17 NVLINPQQQQISSQQSQQQQTCLNIAPIISEQYQQSNCSPPQSLQHSP 64
N + P+ + + + + T ++ + E QSN PQ +QH P
Sbjct: 725 NTITIPKPEVLKTSGEDSRSTTVS-GSDVEEAVTQSNLGGPQRMQHEP 771
>M.Javanica_Scaff24859g090002 on XP_816886 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 905
Score = 23.9 bits (50), Expect = 7.0, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query: 117 GPRLANISLLMRKLEGTTEEERSTPPLLANWSVPPPAS----ADSGNPGSNLELRESPSL 172
G A +S R GT EEE T + S P P+S + SG+ G + +RE SL
Sbjct: 721 GSYAAAVSSGGRGFHGTREEETETDGNSGSASPPAPSSVSTASHSGDEG--MSVREGTSL 778
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff20875g083469
(437 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001608795 variant erythrocyte surface antigen-1, alpha subun... 30 0.24
XP_001611897 variant erythrocyte surface antigen-1, alpha subun... 27 3.4
AAM47174 Rh4 (Adhesin) [Plasmodium falciparum] 27 4.0
AAM47175 Rh4 (Adhesin) [Plasmodium falciparum] 27 4.0
AAM47192 Rh4 (Adhesin) [Plasmodium falciparum] 27 4.1
>M.Javanica_Scaff20875g083469 on XP_001608795 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1323
Score = 30.4 bits (67), Expect = 0.24, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 31/84 (36%), Gaps = 14/84 (16%)
Query: 322 HQFGYSNGTNQEHSFAYSSPRRSHAPH--NFNTKMSFNSPDGKRNRMSTKFSFSNNHDNS 379
H +NG F + H H +FNT + P+G + + + S SN H N
Sbjct: 369 HDVSDTNGNTARAPFGMNYAGFVHTAHRDSFNTDQATVFPNGTSSSSAVQISESNQHKNG 428
Query: 380 ------------FETMPPKASPKA 391
F + KA PKA
Sbjct: 429 AIFKLYILSCAYFTGLQQKAPPKA 452
>M.Javanica_Scaff20875g083469 on XP_001611897 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1369
Score = 26.6 bits (57), Expect = 3.4, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 4/52 (7%)
Query: 35 FGYAPPSEEEYYTAEDGESSEEIVMPKGNKFRKYNICKNILEEIKVVLNDSE 86
F Y P E + E+ E + + KG K R C LE +K V+ +E
Sbjct: 1206 FSYGNPFNLEGFEQENKEKGDYSIDNKGGKKR----CHEFLESLKKVIESTE 1253
>M.Javanica_Scaff20875g083469 on AAM47174 Rh4 (Adhesin) [Plasmodium falciparum]
Length = 1711
Score = 26.6 bits (57), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 130 YNLLVEGKSPIDSLNEAIAKVKEHLNTTFKMKLLLKKRFNQANWPYD 176
Y L E K+ ++++ + I + + TT ++K+ +KK F+Q N YD
Sbjct: 745 YTLYQEIKTNLENIEQKIMQNIQQ--TTNRLKINIKKIFDQINQKYD 789
>M.Javanica_Scaff20875g083469 on AAM47175 Rh4 (Adhesin) [Plasmodium falciparum]
Length = 1711
Score = 26.6 bits (57), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 130 YNLLVEGKSPIDSLNEAIAKVKEHLNTTFKMKLLLKKRFNQANWPYD 176
Y L E K+ ++++ + I + + TT ++K+ +KK F+Q N YD
Sbjct: 743 YTLYQEIKTNLENIEQKIMQNIQQ--TTNRLKINIKKIFDQINQKYD 787
>M.Javanica_Scaff20875g083469 on AAM47192 Rh4 (Adhesin) [Plasmodium falciparum]
Length = 1716
Score = 26.6 bits (57), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 130 YNLLVEGKSPIDSLNEAIAKVKEHLNTTFKMKLLLKKRFNQANWPYD 176
Y L E K+ ++++ + I + + TT ++K+ +KK F+Q N YD
Sbjct: 745 YTLYQEIKTNLENIEQKIMQNIQQ--TTNRLKINIKKIFDQINQKYD 789
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff174g002971
(186 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum] 24 5.4
>M.Javanica_Scaff174g002971 on XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3954
Score = 24.3 bits (51), Expect = 5.4, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 11/55 (20%)
Query: 23 AEQDDIQPNNGPSSLRDLRRAPQR--------TEEPKCGTADLSYQPCTSKTVAN 69
+ Q+ + P+ PS D+ P+ +EPKCG ++ TSKT N
Sbjct: 2395 STQEKMSPDFCPS---DMPEKPKTDSDILCDDKKEPKCGNFRTLFKTSTSKTKTN 2446
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff19162g080257
(175 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAO72427 SAG2 (Others) [Toxoplasma gondii] 32 0.013
XP_821078 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.3
>M.Javanica_Scaff19162g080257 on AAO72427 SAG2 (Others) [Toxoplasma gondii]
Length = 186
Score = 31.6 bits (70), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 13 VRCLITIILLIDARTEDDLNFKRGDSLEILNSMEGDWWYAR 53
+ C +DA + + F+ GD L I S EGD +Y +
Sbjct: 35 IECTAGATKTVDAPSSGSVVFQCGDKLTISPSGEGDVFYGK 75
>M.Javanica_Scaff19162g080257 on XP_821078 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 940
Score = 26.2 bits (56), Expect = 1.3, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 59 KCGYIPANYVARDKTIDAQPWYFGKLRRIESEKLLL 94
+CG+I AN RD + P Y K + EK +L
Sbjct: 353 RCGFITANVEDRDVMLVTLPVYSKKAEKDNEEKSVL 388
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff21504g084555
(61 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_827749 VSG (Establishment) [Trypanosoma brucei] 22 3.8
XP_001350936 PfEMP1 (Establishment) [Plasmodium falciparum] 21 6.6
>M.Javanica_Scaff21504g084555 on XP_827749 VSG (Establishment) [Trypanosoma brucei]
Length = 516
Score = 21.9 bits (45), Expect = 3.8, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 12 LSWQRLTGHIINAVLACTSTIKAFIRNFHSSHEQVYADNEN 52
L +R T INA A S +K I + S + Y D N
Sbjct: 311 LQKKRRTNQEINADSALESKVKGIIGSDADSFKNTYLDKVN 351
>M.Javanica_Scaff21504g084555 on XP_001350936 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2163
Score = 21.2 bits (43), Expect = 6.6, Method: Composition-based stats.
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 29 TSTIKAFIRNFHSSHEQVYADNENF 53
T+ +++ F+ ++ Y D ENF
Sbjct: 429 TTINNLYVKEFYKKLQEKYGDVENF 453
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff24287g089116
(106 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_818295 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.7
XP_001611441 variant erythrocyte surface antigen-1, beta subuni... 23 3.4
>M.Javanica_Scaff24287g089116 on XP_818295 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 922
Score = 23.9 bits (50), Expect = 2.7, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 26 DIALFKFKREQLEHQMKKRFYAWDEM 51
D+AL +F E+L+ F A+DE+
Sbjct: 631 DLALLRFSDEELDEISHFYFGAYDEL 656
>M.Javanica_Scaff24287g089116 on XP_001611441 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1205
Score = 23.5 bits (49), Expect = 3.4, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 48 WDEMSAKRSLIPSARALSHMGLTAGDASA 76
WD++ K L + L+ +GL G SA
Sbjct: 78 WDDILLKEELTIAQPVLTDLGLLGGSTSA 106
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2305g022050
(726 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum] 32 0.13
XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum] 32 0.19
XP_803417 VSG (Establishment) [Trypanosoma brucei] 26 7.2
XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum] 26 9.4
>M.Javanica_Scaff2305g022050 on XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3346
Score = 32.3 bits (72), Expect = 0.13, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 123 STLTSIQGNNDIALAGGIYGCHFANVGEIMRSYKGWKAEDFNKFKGMMVNIF 174
+ T + G ND FA++G+I+R W+ DF K + +V IF
Sbjct: 2438 TNYTRLNGQNDNGAKCRAMKYSFADIGDIVRGRDLWEHNDFKKLERDLVKIF 2489
>M.Javanica_Scaff2305g022050 on XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2994
Score = 31.6 bits (70), Expect = 0.19, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 24/52 (46%)
Query: 123 STLTSIQGNNDIALAGGIYGCHFANVGEIMRSYKGWKAEDFNKFKGMMVNIF 174
+ T + G ND FA++G+I+R W +DF + +V IF
Sbjct: 2098 TNYTRLNGQNDNGAKCRAMKYSFADIGDIIRGKDLWGIQDFKDLQTKLVTIF 2149
>M.Javanica_Scaff2305g022050 on XP_803417 VSG (Establishment) [Trypanosoma brucei]
Length = 540
Score = 26.2 bits (56), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 515 KLYFSLSFKNVSNGSLPIDLSENKFSIKLFNGASVGVGI 553
KL + N+ NG+ D++ K + KL +GAS G +
Sbjct: 206 KLQNGVDHDNLVNGAKQCDINSAKTTFKLSDGASDGTNV 244
>M.Javanica_Scaff2305g022050 on XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3119
Score = 26.2 bits (56), Expect = 9.4, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 636 GIQGSLDCVNKWIHLAVTQLGE 657
G +G L+CV KW++ T+ G+
Sbjct: 2438 GCKGKLECVEKWLNKKSTEWGD 2459
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff17813g077470
(96 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_954179 TashAT2 (Establishment) [Theileria annulata] 24 1.8
>M.Javanica_Scaff17813g077470 on XP_954179 TashAT2 (Establishment) [Theileria annulata]
Length = 1161
Score = 24.3 bits (51), Expect = 1.8, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 50 LNQPKKRRMASLQKASDTITTAINLNKTGSSMALSNDG-FLKSSLW 94
LN P + + +Q + + T I K S+ NDG FL + W
Sbjct: 24 LNDPSRSKFRVIQYTKENVITTIIYPKKNESITQVNDGQFLLFTPW 69
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2403g022702
(305 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349036 PfEMP1 (Establishment) [Plasmodium falciparum] 30 0.15
XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum] 28 0.92
XP_813677 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 3.8
XP_808550 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 3.8
XP_818382 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.9
ABR92025 MSA-1 (Invasion) [Babesia bovis] 25 5.3
ABR92032 MSA-1 (Invasion) [Babesia bovis] 25 5.3
ABR92033 MSA-1 (Invasion) [Babesia bovis] 25 5.6
ABR92034 MSA-1 (Invasion) [Babesia bovis] 25 5.6
ABR92023 MSA-1 (Invasion) [Babesia bovis] 25 5.9
XP_821395 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.0
XP_805179 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.4
XP_821438 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 7.8
>M.Javanica_Scaff2403g022702 on XP_001349036 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2192
Score = 30.4 bits (67), Expect = 0.15, Method: Composition-based stats.
Identities = 32/123 (26%), Positives = 49/123 (39%), Gaps = 28/123 (22%)
Query: 117 HFPDYQDKPDLVKQLGYSYFSHFASARGYSAAGSEPASSVDWTDVLIYFTQILNTYQEQL 176
H+P YQ+K D + AR ++ G V D+ I + Q +EQL
Sbjct: 169 HYPQYQEKYDDSPSEMCTML-----ARSFADIGD----IVRGKDLFIGYNQKDRKEKEQL 219
Query: 177 QNDYSEYLDRETRLLFINRRIEDYRQSVDQNEYNQFIGDHGLDINEFVGERD--WTVIPA 234
QN +L +I ++I + S Q YN G+ F R+ WT A
Sbjct: 220 QN----------KLKYIFKKIHEKLDSEAQTRYNDATGN-------FYQLREDWWTANRA 262
Query: 235 SLW 237
++W
Sbjct: 263 TIW 265
>M.Javanica_Scaff2403g022702 on XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum]
Length = 3130
Score = 27.7 bits (60), Expect = 0.92, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 167 QILNTYQEQLQNDYSEYLDRETRLLFINRRIEDYRQSVDQNE-YNQFIGD 215
++LN ++ +QN ++Y T IN R+EDY++ ++ E Y IG+
Sbjct: 770 KLLNHIEQNIQNSSNKYTITYTD---INNRMEDYKEEIESLEVYKHTIGN 816
>M.Javanica_Scaff2403g022702 on XP_813677 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 945
Score = 25.8 bits (55), Expect = 3.8, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 140 ASARGYSAAGSEPASSVDWTDV 161
A+ RG S S P + +DW D+
Sbjct: 66 ANNRGASGQESSPGNCIDWRDI 87
>M.Javanica_Scaff2403g022702 on XP_808550 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 948
Score = 25.8 bits (55), Expect = 3.8, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 140 ASARGYSAAGSEPASSVDWTDV 161
A+ RG S S P + +DW D+
Sbjct: 66 ANNRGASGQESSPGNCIDWRDI 87
>M.Javanica_Scaff2403g022702 on XP_818382 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 890
Score = 25.4 bits (54), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 17/29 (58%)
Query: 136 FSHFASARGYSAAGSEPASSVDWTDVLIY 164
SHF G +AGSE SV T+VL+Y
Sbjct: 641 ISHFYIGVGGGSAGSEEEVSVTVTNVLLY 669
>M.Javanica_Scaff2403g022702 on ABR92025 MSA-1 (Invasion) [Babesia bovis]
Length = 319
Score = 25.0 bits (53), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 181 SEYLDRETRLLFINRRI--EDYRQSVDQNEYNQFIGDHGLDINEFVGERDWTVIPAS 235
++++D+ + L N I ED ++V+ + + + G+H +D+N G + PAS
Sbjct: 136 AQHMDKYLKSLRWNTDIVEEDREKAVEYFKKHVYTGEHVVDVNGMAGVCKEFLSPAS 192
>M.Javanica_Scaff2403g022702 on ABR92032 MSA-1 (Invasion) [Babesia bovis]
Length = 319
Score = 25.0 bits (53), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 181 SEYLDRETRLLFINRRI--EDYRQSVDQNEYNQFIGDHGLDINEFVGERDWTVIPAS 235
++++D+ + L N I ED ++V+ + + + G+H +D+N G + PAS
Sbjct: 136 AQHMDKYLKSLRWNTDIVEEDREKAVEYFKKHVYTGEHVVDVNGMAGVCKEFLSPAS 192
>M.Javanica_Scaff2403g022702 on ABR92033 MSA-1 (Invasion) [Babesia bovis]
Length = 319
Score = 25.0 bits (53), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 181 SEYLDRETRLLFINRRI--EDYRQSVDQNEYNQFIGDHGLDINEFVGERDWTVIPAS 235
++++D+ + L N I ED ++V+ + + + G+H +D+N G + PAS
Sbjct: 136 AQHMDKYLKSLRWNTDIVEEDREKAVEYFKKHVYTGEHVVDVNGMAGVCKEFLSPAS 192
>M.Javanica_Scaff2403g022702 on ABR92034 MSA-1 (Invasion) [Babesia bovis]
Length = 319
Score = 25.0 bits (53), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 181 SEYLDRETRLLFINRRI--EDYRQSVDQNEYNQFIGDHGLDINEFVGERDWTVIPAS 235
++++D+ + L N I ED ++V+ + + + G+H +D+N G + PAS
Sbjct: 136 AQHMDKYLKSLRWNTDIVEEDREKAVEYFKKHVYTGEHVVDVNGMAGVCKEFLSPAS 192
>M.Javanica_Scaff2403g022702 on ABR92023 MSA-1 (Invasion) [Babesia bovis]
Length = 319
Score = 25.0 bits (53), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 181 SEYLDRETRLLFINRRI--EDYRQSVDQNEYNQFIGDHGLDINEFVGERDWTVIPAS 235
++++D+ + L N I ED ++V+ + + + G+H +D+N G + PAS
Sbjct: 136 AQHMDKYLKSLRWNTDIVEEDREKAVEYFKKHVYTGEHVVDVNGMAGVCKEFLSPAS 192
>M.Javanica_Scaff2403g022702 on XP_821395 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 768
Score = 25.0 bits (53), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 128 VKQLGYSYFSHFASARGYSAAGSEPASSVDWTDVLIY 164
+K G SHF S+AGS SV T+VL+Y
Sbjct: 666 LKDNGSKGISHFYIGGDGSSAGSREGVSVTVTNVLLY 702
>M.Javanica_Scaff2403g022702 on XP_805179 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 793
Score = 25.0 bits (53), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 136 FSHFASARGYSAAGSEPASSVDWTDVLIY 164
SHF+ +AGSE SV T+VL+Y
Sbjct: 681 ISHFSIGGDGGSAGSEEVVSVTVTNVLLY 709
>M.Javanica_Scaff2403g022702 on XP_821438 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 957
Score = 24.6 bits (52), Expect = 7.8, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 6/56 (10%)
Query: 115 GKHFPDYQDK------PDLVKQLGYSYFSHFASARGYSAAGSEPASSVDWTDVLIY 164
G HF Y D P ++ SHF AG + SV T+VL+Y
Sbjct: 661 GSHFSAYVDGERVGDVPCALETTDSKVISHFYIGGSTDGAGGQEDVSVTVTNVLLY 716
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff24504g089452
(66 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff16422g074549
(70 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001608785 variant erythrocyte surface antigen-1, alpha subun... 24 1.1
>M.Javanica_Scaff16422g074549 on XP_001608785 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 954
Score = 23.9 bits (50), Expect = 1.1, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 33 FFFTSLDFFPGLQARIRTRSINQNPGT 59
+ S +F GLQ + ++ N+NP T
Sbjct: 444 LYILSCAYFTGLQKKTPPKADNRNPKT 470
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff18021g077901
(491 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_820741 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 3.3
XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum] 27 3.7
>M.Javanica_Scaff18021g077901 on XP_820741 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 894
Score = 26.9 bits (58), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 349 GNFDEKLSFDEFISFMANLLNLNGEAKKE 377
GNF E DE++ A + N G AK E
Sbjct: 515 GNFSENTWMDEYLGVNATVHNKGGAAKAE 543
>M.Javanica_Scaff18021g077901 on XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2264
Score = 26.6 bits (57), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 45/114 (39%), Gaps = 16/114 (14%)
Query: 231 IKYFEEKMKILSESSTDLNNNSKEDKFPIIF--------ELFTKKPEIIKKSENIKIIKD 282
+K E+K + S+ +D + + D P++ E+ K PEI K + K D
Sbjct: 1635 LKKLEKKTESCSDEHSDQTHQTSCDSPPLVEDEDDTLHEEIEVKMPEICKNVVDTKKEND 1694
Query: 283 QNIKKEPSLTTTTTETIIDDHILN--------WIYFGGEIKTTSPPQPTPKTST 328
+ + S T T ET+ D G + T P +P+PK +
Sbjct: 1695 ETGETCTSEDTITKETVETDSTDGPKQEEERIAPSAGDDGATRGPQEPSPKADS 1748
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff20246g082314
(207 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_806340 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.54
XP_001349034 PfEMP1 (Establishment) [Plasmodium falciparum] 27 0.90
XP_811683 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.7
XP_001611205 variant erythrocyte surface antigen-1, beta subuni... 25 3.9
XP_001347691 PfEMP1 (Establishment) [Plasmodium falciparum] 25 5.9
>M.Javanica_Scaff20246g082314 on XP_806340 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 633
Score = 27.7 bits (60), Expect = 0.54, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 13/84 (15%)
Query: 58 DGRKTLVSILKEIKTSQQPKETRWYWI---NKLFL--PIPQWRRE----ETALLYCKNEL 108
+GRK ++ K T +Q + + W+ N+ F P+ E + ALLY EL
Sbjct: 296 EGRKVMLYTQKRYPTEEQKDKALYLWVTDNNRTFHLGPVAMDSAENKTFDNALLYSDGEL 355
Query: 109 ----EEENEQNSSSCLEKIFNEFN 128
+ NE++S L ++ E +
Sbjct: 356 YLSQQRANEKDSVISLSRLTEELS 379
>M.Javanica_Scaff20246g082314 on XP_001349034 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 26.9 bits (58), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 93 QWRREETALLYCKNELEEENEQNSSSCLEKIFNEFNQDPLEELLKDNI 140
Q ++ L KNE E N QN ++K +N+F + +LKD+I
Sbjct: 635 QKVKDAGGLCILKNERSETNSQNHPYDIQKTYNDFFNFWVAHVLKDSI 682
>M.Javanica_Scaff20246g082314 on XP_811683 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 725
Score = 26.2 bits (56), Expect = 1.7, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 89 LPIPQWRREETALLYCKNELEEENEQNSSSCLEKIF 124
LP P+ R E A Y +EE++++SS ++ +F
Sbjct: 649 LPTPEVRGAEIADFYFVGGEDEEDKKSSSVTVKNVF 684
>M.Javanica_Scaff20246g082314 on XP_001611205 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1146
Score = 25.0 bits (53), Expect = 3.9, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 45 HKCSRFHTNTEAGDGRKTLVSILKEIKTSQQPKETRWYW 83
H+C + + AG G K +S + T P E ++YW
Sbjct: 183 HQCVKCGISANAG-GNKCYISAYCKATTVPPPPEGQYYW 220
>M.Javanica_Scaff20246g082314 on XP_001347691 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2182
Score = 24.6 bits (52), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 92 PQWRRE-ETALLYC----KNELEEENEQNSSSCLEKIFNEFNQDPLEELLKDNIDEKRER 146
PQ+ ++ +T C N E+ N+Q +S ++K FN F + +LKD+I R
Sbjct: 609 PQYEKDVKTGGGLCILEKTNGKEKVNKQKTSHEMQKTFNPFFYYWVVHMLKDSI---HWR 665
Query: 147 SKLLELLIKDRSES 160
+K L+ I + +ES
Sbjct: 666 TKKLDKCINNSNES 679
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2003g019948
(84 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_810574 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.33
XP_001350954 RESA (Others) [Plasmodium falciparum] 24 1.7
XP_001611736 variant erythrocyte surface antigen-1, alpha subun... 22 9.1
>M.Javanica_Scaff2003g019948 on XP_810574 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 954
Score = 25.8 bits (55), Expect = 0.33, Method: Composition-based stats.
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 55 DLCAATYAPGDLCAATFAPGDLCAAT 80
+L AAT P +L AAT P +L AAT
Sbjct: 792 ELNAATSTPEELNAATSTPEELNAAT 817
Score = 22.7 bits (47), Expect = 3.6, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 58 AATYAPGDLCAATFAPGDLCAATFAP 83
A P +L AAT P +L AAT P
Sbjct: 785 GAPSTPEELNAATSTPEELNAATSTP 810
>M.Javanica_Scaff2003g019948 on XP_001350954 RESA (Others) [Plasmodium falciparum]
Length = 654
Score = 23.9 bits (50), Expect = 1.7, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 27/81 (33%), Gaps = 14/81 (17%)
Query: 14 YGICGDFCCYGGPKGITTF---APRTFAPRLLRRDLCAGRLLRRDLCA-------ATYAP 63
YGIC + C GP I AP +A D G L D A Y P
Sbjct: 246 YGICNETCTTCGPAAIDYVPADAPNGYAYGGSAHDGSHGNLRGHDNKGSEGYGYEAPYNP 305
Query: 64 GDLCAATFAPGDLCAATFAPP 84
G APG + PP
Sbjct: 306 G----FNGAPGSNGMQNYVPP 322
>M.Javanica_Scaff2003g019948 on XP_001611736 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1365
Score = 21.6 bits (44), Expect = 9.1, Method: Composition-based stats.
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 15 GICGDFCCYGGPKG 28
G+C + CC G KG
Sbjct: 180 GVCANGCCSHGGKG 193
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff21168g083994
(65 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_815845 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.038
XP_818092 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.35
XP_818480 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 0.64
XP_818690 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 0.77
XP_808062 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 2.6
XP_803400 VSG (Establishment) [Trypanosoma brucei] 22 2.7
XP_817537 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.9
XP_812339 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.8
XP_811521 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 6.1
XP_804553 Trans-sialidase (Invasion) [Trypanosoma cruzi] 21 7.9
XP_807444 Trans-sialidase (Invasion) [Trypanosoma cruzi] 21 9.2
>M.Javanica_Scaff21168g083994 on XP_815845 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 936
Score = 27.7 bits (60), Expect = 0.038, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 14/56 (25%)
Query: 18 GGLVFAQMETQLEGGSGERIK--------------RFGYWSGGGHGGGHGIHGGGG 59
GGL+ + E E G G+RIK + YWS GGG G+H G
Sbjct: 200 GGLLLVKGEVSEESGGGKRIKWSDNDGVSRISVGEQRQYWSRLIGGGGLGVHTDDG 255
>M.Javanica_Scaff21168g083994 on XP_818092 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 884
Score = 25.0 bits (53), Expect = 0.35, Method: Composition-based stats.
Identities = 12/21 (57%), Positives = 14/21 (66%)
Query: 18 GGLVFAQMETQLEGGSGERIK 38
GGL+ Q EGGSG+RIK
Sbjct: 200 GGLLLVQGSVCDEGGSGKRIK 220
>M.Javanica_Scaff21168g083994 on XP_818480 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 926
Score = 24.3 bits (51), Expect = 0.64, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 15/55 (27%)
Query: 18 GGLVFAQMETQLEGGSGERIK-------------RFGYWSG--GGHGGGHGIHGG 57
GGL+ Q E E G G+RIK + W+G G G G +H G
Sbjct: 196 GGLLLVQGEVCGESGGGKRIKWSDANAVPRASVGKLDSWTGLIGSGGSGVKMHDG 250
>M.Javanica_Scaff21168g083994 on XP_818690 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 112
Score = 23.9 bits (50), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 7 IFLLAFVLMIGGGLVFAQMETQLEGGS 33
+ LL V+M GG A++E + +
Sbjct: 48 VLLLVLVMMCCGGAATAEVENNADAST 74
>M.Javanica_Scaff21168g083994 on XP_808062 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 825
Score = 22.3 bits (46), Expect = 2.6, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Query: 6 IIFLLAFVLMIGGGLVFA-QMETQLEGGSGERIKRFGYWSGGGHGG 50
++ LL FV+M G G A Q ++ G F W G G
Sbjct: 47 VVLLLLFVMMCGSGASTAEQAGATVDSFKGTTSISFANWRGFKEAG 92
>M.Javanica_Scaff21168g083994 on XP_803400 VSG (Establishment) [Trypanosoma brucei]
Length = 483
Score = 22.3 bits (46), Expect = 2.7, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 11/37 (29%)
Query: 16 IGGGLVFAQMETQLEGGSGERIKRFGYWSGGGHGGGH 52
I GG VF+ + QL+ G + G +G GH
Sbjct: 242 IAGGPVFSAAQKQLDAG-----------TSGDYGRGH 267
>M.Javanica_Scaff21168g083994 on XP_817537 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 762
Score = 21.6 bits (44), Expect = 4.9, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 18 GGLVFAQMETQLEGGSGERIK 38
GGL+ + E E G G+RIK
Sbjct: 195 GGLLLVKGEVIDESGGGKRIK 215
>M.Javanica_Scaff21168g083994 on XP_812339 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 949
Score = 21.6 bits (44), Expect = 5.8, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 22/56 (39%), Gaps = 14/56 (25%)
Query: 18 GGLVFAQMETQLEGGSGERIK----------RFG----YWSGGGHGGGHGIHGGGG 59
GG + E E G G+RIK FG WS GGG G++ G
Sbjct: 195 GGFFLVKGEVSDESGGGKRIKWSDNEDVSRASFGEQRQSWSRLIGGGGLGVYTDDG 250
>M.Javanica_Scaff21168g083994 on XP_811521 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 830
Score = 21.6 bits (44), Expect = 6.1, Method: Composition-based stats.
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 7 IFLLAFVLMIGGGLVFAQMETQLEGGS 33
+ LL FVLM G AQ+E + +
Sbjct: 48 VLLLFFVLMCCSGAATAQVENNADAST 74
>M.Javanica_Scaff21168g083994 on XP_804553 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 827
Score = 21.2 bits (43), Expect = 7.9, Method: Composition-based stats.
Identities = 12/45 (26%), Positives = 20/45 (44%)
Query: 7 IFLLAFVLMIGGGLVFAQMETQLEGGSGERIKRFGYWSGGGHGGG 51
+ LL V+M GG A++E + + + G +G G G
Sbjct: 48 VLLLLVVMMCCGGAATAEVEKATDASTPSGSELTGAIAGEGSASG 92
>M.Javanica_Scaff21168g083994 on XP_807444 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 777
Score = 20.8 bits (42), Expect = 9.2, Method: Composition-based stats.
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 16 IGGGLVFAQMETQLEGGSGERIKRFG 41
+GG F ++ ++L SGE +K G
Sbjct: 122 VGGDYYFTEIASELLELSGENLKMLG 147
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff226g003682
(763 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001610196 variant erythrocyte surface antigen-1, alpha subun... 27 4.8
AAK31237 variable surface protein 21e (Establishment) [Giardi... 26 5.1
AAK31242 variable surface protein 42d (Establishment) [Giardi... 26 8.0
AAF14193 SBP3 (Others) [Babesia bovis] 26 8.3
>M.Javanica_Scaff226g003682 on XP_001610196 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1330
Score = 26.9 bits (58), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Query: 717 LNEKTNAFSNILSECRAVRDALGRKKCPYGMRWNGLKREACQPPVDC 763
L + AF NI ECR + KC G+ G + CQ V C
Sbjct: 1131 LESLSEAFRNI--ECRGCKGQCDPNKCKKGVHGQGSGQCGCQSIVSC 1175
>M.Javanica_Scaff226g003682 on AAK31237 variable surface protein 21e (Establishment) [Giardia
duodenalis]
Length = 132
Score = 25.8 bits (55), Expect = 5.1, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 14/33 (42%)
Query: 452 INDIKNSRDCLDICDGQTKTTCNSAQWTTTEGC 484
++D N C+ D T NSAQW C
Sbjct: 41 VDDSTNGHKCVSCGDETGVTDANSAQWKGVANC 73
>M.Javanica_Scaff226g003682 on AAK31242 variable surface protein 42d (Establishment) [Giardia
duodenalis]
Length = 169
Score = 25.8 bits (55), Expect = 8.0, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 14/33 (42%)
Query: 452 INDIKNSRDCLDICDGQTKTTCNSAQWTTTEGC 484
++D N C+ D T NSAQW C
Sbjct: 78 VDDSTNGHKCVSCGDETGVTDANSAQWKGVANC 110
>M.Javanica_Scaff226g003682 on AAF14193 SBP3 (Others) [Babesia bovis]
Length = 1089
Score = 26.2 bits (56), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 227 EILEHFNTNNEKQCNCPCKALSELTAQRNIPLNLTGSENGEKVIGDSTLETKPIPVNNA 285
++ E+ E++ CPCK A+R +L G + E+V + +E K + + N
Sbjct: 947 DVSEYLLRKEEEEETCPCKEKEAELARRKAREDLNGM-SAEEVAKKAAIEAKHVHMQNV 1004
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff20293g082403
(137 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001608668 variant erythrocyte surface antigen-1, alpha subun... 27 0.46
CAC34726 MIC4 (Adhesin) [Eimeria tenella] 25 1.7
AAK19757 MIC8 (Invasion) [Toxoplasma gondii] 24 2.5
XP_001610196 variant erythrocyte surface antigen-1, alpha subun... 24 3.1
AAW71454 Histo-aspartic protease (Proteases) [Plasmodium falc... 24 3.2
AAW71455 Histo-aspartic protease (Proteases) [Plasmodium falc... 24 3.2
AAW71456 Histo-aspartic protease (Proteases) [Plasmodium falc... 24 3.2
AAW71457 Histo-aspartic protease (Proteases) [Plasmodium falc... 24 3.2
AAW71458 Histo-aspartic protease (Proteases) [Plasmodium falc... 24 3.2
AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 6.2
AAL38218 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 6.3
AAL38222 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 6.4
AAL38220 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 6.4
AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 6.4
>M.Javanica_Scaff20293g082403 on XP_001608668 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1337
Score = 26.9 bits (58), Expect = 0.46, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 53 ECTKPSCEPTCHTVFNQTTPCNSECGPPGCQCKPGTVRSGKYC 95
E P+ H + T C G P C+C GT +GK C
Sbjct: 166 EVPGPTDHSKGHHLGRGCTRCKGSSGQPPCECS-GTCTAGKEC 207
>M.Javanica_Scaff20293g082403 on CAC34726 MIC4 (Adhesin) [Eimeria tenella]
Length = 255
Score = 25.0 bits (53), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Query: 74 NSECGPPG--CQCKPGTVRSGKYCIRTNFCPG 103
N+ C P G CQCKPG G C N C G
Sbjct: 206 NATCDPLGATCQCKPGFRGDGTQCEAFNPCEG 237
>M.Javanica_Scaff20293g082403 on AAK19757 MIC8 (Invasion) [Toxoplasma gondii]
Length = 255
Score = 24.3 bits (51), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Query: 74 NSECGPPGCQCKPGTVRSGKYCIRTNFC 101
N E G CQCK G GK C + +FC
Sbjct: 146 NREDGGAYCQCKEGYWGDGKSC-KIDFC 172
>M.Javanica_Scaff20293g082403 on XP_001610196 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1330
Score = 24.3 bits (51), Expect = 3.1, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 9/41 (21%)
Query: 41 INRFCLPNEISVE----CTKPSCEPTCHTVFNQTTPCNSEC 77
+ ++C P I ++ CTK + EP H+++ N+EC
Sbjct: 557 VTQYCPPVLIGIQGGIHCTKGTEEPAIHSLY-----ANTEC 592
>M.Javanica_Scaff20293g082403 on AAW71454 Histo-aspartic protease (Proteases) [Plasmodium
falciparum]
Length = 451
Score = 24.3 bits (51), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 11/39 (28%), Positives = 18/39 (46%)
Query: 51 SVECTKPSCEPTCHTVFNQTTPCNSECGPPGCQCKPGTV 89
S++CT SCE H +++ + P K GT+
Sbjct: 167 SIKCTSESCESKNHYDSSKSKTYEKDDTPVKLTSKAGTI 205
>M.Javanica_Scaff20293g082403 on AAW71455 Histo-aspartic protease (Proteases) [Plasmodium
falciparum]
Length = 451
Score = 24.3 bits (51), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 11/39 (28%), Positives = 18/39 (46%)
Query: 51 SVECTKPSCEPTCHTVFNQTTPCNSECGPPGCQCKPGTV 89
S++CT SCE H +++ + P K GT+
Sbjct: 167 SIKCTSESCESKNHYDSSKSKTYEKDDTPVKLTSKAGTI 205
>M.Javanica_Scaff20293g082403 on AAW71456 Histo-aspartic protease (Proteases) [Plasmodium
falciparum]
Length = 451
Score = 24.3 bits (51), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 11/39 (28%), Positives = 18/39 (46%)
Query: 51 SVECTKPSCEPTCHTVFNQTTPCNSECGPPGCQCKPGTV 89
S++CT SCE H +++ + P K GT+
Sbjct: 167 SIKCTSESCESKNHYDSSKSKTYEKDDTPVKLTSKAGTI 205
>M.Javanica_Scaff20293g082403 on AAW71457 Histo-aspartic protease (Proteases) [Plasmodium
falciparum]
Length = 451
Score = 24.3 bits (51), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 11/39 (28%), Positives = 18/39 (46%)
Query: 51 SVECTKPSCEPTCHTVFNQTTPCNSECGPPGCQCKPGTV 89
S++CT SCE H +++ + P K GT+
Sbjct: 167 SIKCTSESCESKNHYDSSKSKTYEKDDTPVKLTSKAGTI 205
>M.Javanica_Scaff20293g082403 on AAW71458 Histo-aspartic protease (Proteases) [Plasmodium
falciparum]
Length = 451
Score = 24.3 bits (51), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 11/39 (28%), Positives = 18/39 (46%)
Query: 51 SVECTKPSCEPTCHTVFNQTTPCNSECGPPGCQCKPGTV 89
S++CT SCE H +++ + P K GT+
Sbjct: 167 SIKCTSESCESKNHYDSSKSKTYEKDDTPVKLTSKAGTI 205
>M.Javanica_Scaff20293g082403 on AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2969
Score = 23.5 bits (49), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 46 LPNEISVECTKPSCEPTCH 64
L NE+S+ K +CE C+
Sbjct: 277 LTNEVSINLNKSTCEKNCY 295
>M.Javanica_Scaff20293g082403 on AAL38218 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2977
Score = 23.5 bits (49), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 46 LPNEISVECTKPSCEPTCH 64
L NE+S+ K +CE C+
Sbjct: 277 LTNEVSINLNKSTCEKNCY 295
>M.Javanica_Scaff20293g082403 on AAL38222 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2976
Score = 23.5 bits (49), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 46 LPNEISVECTKPSCEPTCH 64
L NE+S+ K +CE C+
Sbjct: 277 LTNEVSINLNKSTCEKNCY 295
>M.Javanica_Scaff20293g082403 on AAL38220 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2957
Score = 23.5 bits (49), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 46 LPNEISVECTKPSCEPTCH 64
L NE+S+ K +CE C+
Sbjct: 277 LTNEVSINLNKSTCEKNCY 295
>M.Javanica_Scaff20293g082403 on AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2965
Score = 23.5 bits (49), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 46 LPNEISVECTKPSCEPTCH 64
L NE+S+ K +CE C+
Sbjct: 277 LTNEVSINLNKSTCEKNCY 295
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2335g022233
(166 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_965997 PfEMP1 (Establishment) [Plasmodium falciparum] 25 3.1
XP_001351561 PfEMP1 (Establishment) [Plasmodium falciparum] 23 9.9
XP_001348946 PfEMP1 (Establishment) [Plasmodium falciparum] 23 9.9
>M.Javanica_Scaff2335g022233 on XP_965997 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2879
Score = 25.0 bits (53), Expect = 3.1, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 64 DDCFAKSLQAVRGPFVDVSQNQIKNDF----SSAANDFQSEVEQCFDNGGKTAEPAEINT 119
+D + Q++ G + + +N K++F + D + + Q D+ K EP+E NT
Sbjct: 615 NDVYKDQKQSL-GIYYEKLENLFKSNFFQVMKALEGDEKGKWYQFKDDLKKKFEPSEKNT 673
Query: 120 TTSDSSQLIGAIF 132
T+DS I I
Sbjct: 674 RTTDSQDAIKLIL 686
>M.Javanica_Scaff2335g022233 on XP_001351561 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3553
Score = 23.5 bits (49), Expect = 9.9, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 102 EQCFDNGGKTAEPAEINTTTSDSSQLIGA 130
E+C DN K + P ++T T+ ++ G+
Sbjct: 717 ERCIDNNSKDSCPPSVDTKTNPCAKPPGS 745
>M.Javanica_Scaff2335g022233 on XP_001348946 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3553
Score = 23.5 bits (49), Expect = 9.9, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 102 EQCFDNGGKTAEPAEINTTTSDSSQLIGA 130
E+C DN K + P ++T T+ ++ G+
Sbjct: 717 ERCIDNNSKDSCPPSVDTKTNPCAKPPGS 745
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff23458g087830
(83 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff180g003069
(240 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001608667 variant erythrocyte surface antigen-1, beta subuni... 28 0.48
XP_845137 VSG (Establishment) [Trypanosoma brucei] 25 3.5
>M.Javanica_Scaff180g003069 on XP_001608667 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1139
Score = 28.1 bits (61), Expect = 0.48, Method: Composition-based stats.
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 28 ETTAPAAEPTTTPFPSCL 45
E TAPAA P+T+ P CL
Sbjct: 39 EKTAPAAPPSTSNAPHCL 56
>M.Javanica_Scaff180g003069 on XP_845137 VSG (Establishment) [Trypanosoma brucei]
Length = 485
Score = 25.4 bits (54), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 13/21 (61%)
Query: 202 KPRTTTVKPTTPTKEPTTTPP 222
K TVK TTP KE TTTP
Sbjct: 125 KAGAATVKYTTPAKEDTTTPA 145
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff24674g089713
(144 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351080 PfEMP1 (Establishment) [Plasmodium falciparum] 26 0.97
>M.Javanica_Scaff24674g089713 on XP_001351080 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2209
Score = 26.2 bits (56), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 9/79 (11%)
Query: 70 KTATDEAKEEKVQNGQNV---------RIPEKQNEKEIPDDILLSSYIKGSKLNKTDLPN 120
K D+ KE+K +NG+N+ + EK + EIPDD L + +
Sbjct: 980 KYKVDKEKEDKEKNGRNMVVYTSPVPNDLYEKLKKGEIPDDFLRQMFYTLADYKDILFSG 1039
Query: 121 KKKNKFLEDDALNGIKNFY 139
K NK +D L+G K +
Sbjct: 1040 DKDNKNGYNDILSGDKELH 1058
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff21173g084003
(377 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_817842 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 5.2
XP_805896 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.0
XP_807448 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 8.9
>M.Javanica_Scaff21173g084003 on XP_817842 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 897
Score = 25.8 bits (55), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 78 DEGDVASAGQQSNDLNEMINQIKEV-----EINEQLELNNDLSSLSERNPESGKSEENTL 132
DEGD S G S L E + ++KEV E++E++ ++SL++++P + + +
Sbjct: 452 DEGDTPSLGMVSVILTEQLQRVKEVLKTWKEVDERVS-KLCINSLAQKDPSADTACSAAM 510
Query: 133 STNLLATTLT 142
T L L+
Sbjct: 511 PTAGLVGFLS 520
>M.Javanica_Scaff21173g084003 on XP_805896 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 692
Score = 25.4 bits (54), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 239 ENNNNEDYFNRKNTLHSVE-DEKTDLEVKNHEQFNPH 274
+ +NN+++F N E DEK + +N +QF PH
Sbjct: 613 QKDNNDEWFVYANGRRIYETDEKEMAQDRNADQFGPH 649
>M.Javanica_Scaff21173g084003 on XP_807448 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 831
Score = 25.0 bits (53), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 234 RSNERENNNNEDYFNRKNTLHSVE-DEKTDLEVKNHEQFNPH 274
R R+NN++E +F N E DEK + +N +QF PH
Sbjct: 609 RVTVRKNNDDE-WFVYANGRRIYETDEKEMAKHRNTDQFGPH 649
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1872g018972
(559 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_806381 Trans-sialidase (Invasion) [Trypanosoma cruzi] 31 0.23
XP_808156 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.37
XP_807319 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.57
XP_818394 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 1.3
XP_805548 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 1.4
XP_810068 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 1.9
XP_805204 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 3.0
XP_815749 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 3.4
XP_812620 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 3.6
XP_001350595 PfEMP1 (Establishment) [Plasmodium falciparum] 27 3.6
XP_802557 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 4.1
XP_812720 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 4.7
XP_808062 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 4.9
XP_812615 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 7.0
XP_820184 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 8.0
XP_808758 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 8.1
XP_807986 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 8.3
XP_829796 VSG (Establishment) [Trypanosoma brucei] 26 8.5
XP_818848 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 9.3
>M.Javanica_Scaff1872g018972 on XP_806381 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1045
Score = 30.8 bits (68), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 88 IKKLTQTWKDLQAEMRSDIAGSYLQNISIQKG---SRFPTD 125
IKK+ +TWKDL + +R+ +GS + +KG R PT+
Sbjct: 454 IKKVVKTWKDLDSALRTCSSGSSATVDARKKGMCNGRVPTE 494
>M.Javanica_Scaff1872g018972 on XP_808156 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1058
Score = 30.0 bits (66), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 88 IKKLTQTWKDLQAEMRSDIAGSYLQNISIQKG---SRFPTDE 126
IK++ +TWKDL + +R+ +GS +++KG PTDE
Sbjct: 464 IKEVVKTWKDLDSVLRTCSSGSSGTVDALRKGMCNGPVPTDE 505
>M.Javanica_Scaff1872g018972 on XP_807319 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1041
Score = 29.6 bits (65), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 88 IKKLTQTWKDLQAEMRSDIAGSYLQNISIQKG---SRFPTDE 126
IKK+ +TW L + ++S +GS S +KG R PTDE
Sbjct: 455 IKKVVKTWAALDSALQSCSSGSSATVDSPKKGMCNGRVPTDE 496
>M.Javanica_Scaff1872g018972 on XP_818394 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1059
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 88 IKKLTQTWKDLQAEMRSDIAGSYLQNISIQKG---SRFPTD 125
IK++ +TWKDL + + S +GS + KG R PTD
Sbjct: 458 IKEVVKTWKDLDSALHSCHSGSSVTVDLPTKGMCNGRVPTD 498
>M.Javanica_Scaff1872g018972 on XP_805548 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1044
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 64 YQQNNEEMQTNLLSVSNPINAFRLIKKLTQTWKDLQAEMRS 104
Y+ N + + NL++V IKK+ +TWKDL + ++S
Sbjct: 435 YENKNSDGKYNLVAV-RLTEKLERIKKVVKTWKDLDSALQS 474
>M.Javanica_Scaff1872g018972 on XP_810068 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1147
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 18/105 (17%)
Query: 64 YQQNNEEMQTNLLSVSNPINAFRLIKKLTQTWKDLQAEMRSDIAGSYLQNISIQKG---S 120
Y+ ++ NL++V IK++ +TWKDL + +R+ + S + +KG
Sbjct: 537 YENKKDDGSYNLVAV-RLTEKLERIKEVVKTWKDLDSALRTCSSVSSGTVDARKKGMCNG 595
Query: 121 RFPTDEDLNGAAVGLLR---LQDTYRLDTGDLANGVVKNVKIGNG 162
R PTD VG L ++T+R D GV N K+ NG
Sbjct: 596 RVPTD-----GLVGFLSGNISENTWR----DEYLGV--NAKVTNG 629
>M.Javanica_Scaff1872g018972 on XP_805204 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 978
Score = 27.3 bits (59), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 88 IKKLTQTWKDLQAEMRSDIAGSYLQNISIQKG---SRFPTD 125
IK + +TWKDL + +R+ +GS +KG PTD
Sbjct: 411 IKSMVKTWKDLDSALRTCRSGSSATVDPRKKGMCNDTVPTD 451
>M.Javanica_Scaff1872g018972 on XP_815749 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1053
Score = 26.9 bits (58), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 64 YQQNNEEMQTNLLSVSNPINAFRLIKKLTQTWKDLQAEMRSDIAGSYLQNISIQK---GS 120
Y+ + NL++VS IK++ +TWKDL + +++ +GS + +K
Sbjct: 431 YENKKSDGAYNLVAVS-LTEKLERIKEVVKTWKDLDSALKTCRSGSSGTVDARKKRMCKG 489
Query: 121 RFPTD 125
R PTD
Sbjct: 490 RVPTD 494
>M.Javanica_Scaff1872g018972 on XP_812620 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1042
Score = 26.9 bits (58), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 88 IKKLTQTWKDLQAEMRSDIAGSYLQNISIQKG---SRFPT 124
IK++ +TWKDL +++ +GS +++KG R PT
Sbjct: 458 IKEVVKTWKDLDNALKTCRSGSSGTVDALRKGMCNGRVPT 497
>M.Javanica_Scaff1872g018972 on XP_001350595 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2256
Score = 26.9 bits (58), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 78/189 (41%), Gaps = 26/189 (13%)
Query: 21 DLFTSSVDLQQLTYAEKDIPKLITNYIQLETERLEHLKSIAEKYQQNNEEMQTNLLSVSN 80
D F VDL Q T + + + ++I E L + I EK Q E+ + S ++
Sbjct: 1521 DKFDQEVDLNQYTTFKVLLIYWLEDFI--EGYYLLKKRKIIEKCTQKGEKT-CDDESKND 1577
Query: 81 PINAFRLIKKLTQTWKDLQAEMRSDIAGSYLQNISIQKGSRFPTDEDLNGAAVGLLRLQD 140
+ ++K T W+ ++ ++ R D D N + +L D
Sbjct: 1578 CACVKKWVEKKTTEWEQIKEHFKN----------------RNQKDGDGNDMKSSVRQLLD 1621
Query: 141 --TYRLDTGDLANGVVKNVKIGNGMSAFDCFEIGRIAYNEEDYFHSLLWMQEAFDRVKRE 198
YR+D LANG K ++ + +++C + +E+D LL Q+ + K+
Sbjct: 1622 PLIYRMD---LANGKGKINELKEFLKSYECKCVDNAGNSEKDVVECLL--QKLETKAKKC 1676
Query: 199 MPPSIAESE 207
PS E++
Sbjct: 1677 KDPSSGENQ 1685
>M.Javanica_Scaff1872g018972 on XP_802557 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 608
Score = 26.6 bits (57), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 88 IKKLTQTWKDLQAEMRSDIAGSYLQNISIQKG---SRFPTD 125
IK + +TWKDL + +R+ +GS +KG PTD
Sbjct: 305 IKSMVKTWKDLDSALRTCRSGSSATVDPRKKGMCNDTVPTD 345
>M.Javanica_Scaff1872g018972 on XP_812720 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1041
Score = 26.6 bits (57), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 66 QNNEEMQTNLLSVSNPINAFRLIKKLTQTWKDLQAEMRSDIAGSYLQNISIQKG---SRF 122
+N ++ NL++V IK++ +TWKDL +++ +GS +KG R
Sbjct: 434 ENKKDGAYNLVAV-RLTEKLERIKEVVKTWKDLDRALKTCRSGSSGTVDVRKKGMCNGRV 492
Query: 123 PTD 125
PTD
Sbjct: 493 PTD 495
>M.Javanica_Scaff1872g018972 on XP_808062 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 825
Score = 26.6 bits (57), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 21/32 (65%)
Query: 88 IKKLTQTWKDLQAEMRSDIAGSYLQNISIQKG 119
+K++ TWKDL + ++S +GS + + +KG
Sbjct: 453 VKEVVNTWKDLDSALQSCSSGSSVTVDTRKKG 484
>M.Javanica_Scaff1872g018972 on XP_812615 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1116
Score = 26.2 bits (56), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 66 QNNEEMQTNLLSVSNPINAFRLIKKLTQTWKDLQAEMRSDIAGSYL 111
+N ++ NL++V IK++ +TWKDL ++S +GS +
Sbjct: 506 ENKKDGAYNLVAV-RLTEKLERIKEVVKTWKDLDGALQSCSSGSSV 550
>M.Javanica_Scaff1872g018972 on XP_820184 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1050
Score = 25.8 bits (55), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 88 IKKLTQTWKDLQAEMRSDIAGSYLQNISIQKG---SRFPTDE 126
+K++ +TWKDL + ++S +GS +KG PTDE
Sbjct: 456 VKEVVKTWKDLDSALQSCSSGSSGTLDLPKKGMCNGPVPTDE 497
>M.Javanica_Scaff1872g018972 on XP_808758 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 823
Score = 25.8 bits (55), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 66 QNNEEMQTNLLSVSNPINAFRLIKKLTQTWKDLQAEMRSDIAGS 109
+N + NL++V IK++ +TWKDL + + S +GS
Sbjct: 430 ENKSDGSYNLVAV-RLTEKLERIKEVVKTWKDLDSALHSCRSGS 472
>M.Javanica_Scaff1872g018972 on XP_807986 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1054
Score = 25.8 bits (55), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 88 IKKLTQTWKDLQAEMRSDIAGSYLQNISIQKGS---RFPTDE 126
IK++ +TWKDL + ++S +GS KG+ PTDE
Sbjct: 463 IKEVVKTWKDLDSALQSCRSGSRGTVDLPTKGTCNGPVPTDE 504
>M.Javanica_Scaff1872g018972 on XP_829796 VSG (Establishment) [Trypanosoma brucei]
Length = 513
Score = 25.8 bits (55), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 8/45 (17%)
Query: 275 AGDSLGNSERDIYEALC--------RDEVPVSQKQTSKLYCYYKK 311
AGD R +EALC EVP + KLY Y +K
Sbjct: 25 AGDVASGDNRHTFEALCAIFRAAEATVEVPATSVDPQKLYQYIQK 69
>M.Javanica_Scaff1872g018972 on XP_818848 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1053
Score = 25.8 bits (55), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 58 KSIAEKYQQNNEEMQTNLLSVSNPINAFRLIKKLTQTWKDLQAEMRS 104
K + Y+ + NL++V IKK+ +TWKDL + ++S
Sbjct: 429 KELISLYENKKSDGSYNLVAV-RLTEKLERIKKVVKTWKDLDSALQS 474
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff21015g083733
(133 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349437 PfEMP1 (Establishment) [Plasmodium falciparum] 26 0.75
XP_001351515 PfEMP1 (Establishment) [Plasmodium falciparum] 23 9.5
>M.Javanica_Scaff21015g083733 on XP_001349437 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2231
Score = 26.2 bits (56), Expect = 0.75, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Query: 39 KGVGACGRWIDSSRDLHVAISPYDWIPCENPKENPICNDICLRVEYKAISIK 90
K GAC + R LHV I EN + + D+CL +Y+ S+K
Sbjct: 115 KSEGACAPF----RRLHVCDKNIQQIKTENITTHNLLLDVCLAAKYEGESLK 162
>M.Javanica_Scaff21015g083733 on XP_001351515 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2181
Score = 22.7 bits (47), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Query: 42 GACGRWIDSSRDLHVAISPYDWIPCENPKENPICNDICLRVEYKAISIK 90
GAC + R LHV + I +N + + D+CL +++A S+K
Sbjct: 118 GACAPY----RRLHVCDQNLELIKPKNITTHNLLVDVCLAAKFEAESLK 162
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff18150g078163
(377 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum] 25 7.7
XP_001349036 PfEMP1 (Establishment) [Plasmodium falciparum] 25 9.6
>M.Javanica_Scaff18150g078163 on XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3119
Score = 25.4 bits (54), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 25/168 (14%)
Query: 73 DANSQERCVLSVSDLEQKAWDRN--GPLRDCSICRTFATGAIKAILSTPADEQKCIREQI 130
D ++ C L+ D Q W + G DC+ C +F + L ++++ R+Q
Sbjct: 330 DEKKRKYCSLNGFDCTQTIWKKKVFGRGNDCTNC-SFKCFPYEIWL---GNQREAFRKQK 385
Query: 131 SKAIAVESESCLRKKVQDFGGIPEIP----DLEEGGSGLREEVIDSISDYIWIHSRLAFC 186
K A E E+ + + GIP+ ++ + L+E+ +++ ++I + + +C
Sbjct: 386 EK-YAKEIEAYVTNR-----GIPKSSINNGYYKDFYNKLKEKTYNTVDEFINLLNEGRYC 439
Query: 187 AERKPERAA----KTRECLKSPFLGFYSKHCRVLNSCDQIGAQSAECV 230
++KPE KT E K F + S +C+V C + S C+
Sbjct: 440 KKQKPEEENIDFIKTGE--KGTF--YRSDYCQVCPDC-GVDCSSGTCI 482
>M.Javanica_Scaff18150g078163 on XP_001349036 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2192
Score = 25.0 bits (53), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 297 STNDWASTIDNALNNCIKNKPNSQ-NLGIDSLLN 329
+ N+W + D+ ++N ++N+PN++ N+ D+L N
Sbjct: 1911 TDNEWNTLKDDFISNMLQNEPNTEPNILHDNLDN 1944
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff16501g074722
(50 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1976g019754
(257 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_807433 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.5
>M.Javanica_Scaff1976g019754 on XP_807433 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1042
Score = 26.9 bits (58), Expect = 1.5, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 11/81 (13%)
Query: 49 IERHLATMHSVAPIIDLAIEDAYFRFLF--NWTNNPKWLVIGQTKSILQCHAQRHAAWAV 106
I++ T S P++ + + DA LF ++T+ KW +I H
Sbjct: 581 IDKAPETGSSSIPLMGVRMNDAQGTVLFGLSYTHEKKWRIIFNGSFREPAH--------- 631
Query: 107 LEALQWNNNKGINVAFGPACD 127
E ++W NK +VA CD
Sbjct: 632 YENVEWEANKKYHVALQMDCD 652
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff21370g084343
(158 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351876 PfEMP1 (Establishment) [Plasmodium falciparum] 25 2.6
XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum] 25 3.7
>M.Javanica_Scaff21370g084343 on XP_001351876 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3164
Score = 25.0 bits (53), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 14/32 (43%)
Query: 99 KYANGVELEWNAFKIYYYHINTTLEFFNDFYG 130
KY G + EW+A YY E ND G
Sbjct: 1509 KYMEGKKKEWDAQYKYYKEQRNKKEVVNDSKG 1540
>M.Javanica_Scaff21370g084343 on XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2858
Score = 24.6 bits (52), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/74 (22%), Positives = 29/74 (39%), Gaps = 13/74 (17%)
Query: 30 ECPYNNMTCGNVAELARYVSKCISIVICYQSLFTNPNKLGNYKLYNMYKQPLGTDSRMCE 89
+C N +TC L Y+ + + + + + K KL ++CE
Sbjct: 1035 KCEQNGITCSGPTPLDDYIPQRLRWMTEWAEWYCKAQKEAYDKL------------KVCE 1082
Query: 90 TCKDFGQCAKYANG 103
C D G+C + NG
Sbjct: 1083 KCMDNGKCTQ-GNG 1095
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff17762g077372
(75 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_803378 VSG (Establishment) [Trypanosoma brucei] 24 0.96
>M.Javanica_Scaff17762g077372 on XP_803378 VSG (Establishment) [Trypanosoma brucei]
Length = 506
Score = 24.3 bits (51), Expect = 0.96, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 45 KFVAFGGDGSNNALSLRYFKAYSYLIPKAVQ 75
KF G DGSNN ++Y S +P Q
Sbjct: 306 KFDMAGCDGSNNGACIKYTDQASNSVPSFKQ 336
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2082g020503
(105 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff16211g074072
(60 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff23818g088382
(94 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351561 PfEMP1 (Establishment) [Plasmodium falciparum] 25 0.72
XP_001348946 PfEMP1 (Establishment) [Plasmodium falciparum] 25 0.72
XP_966160 PfEMP1 (Establishment) [Plasmodium falciparum] 23 5.7
>M.Javanica_Scaff23818g088382 on XP_001351561 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3553
Score = 25.0 bits (53), Expect = 0.72, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 21/36 (58%)
Query: 46 IRQVSFPIFFAICRWKEPPKMEDEKTKLESNHKIQR 81
++ + FFA ++K ++E+++ + NH +QR
Sbjct: 2388 VKSAAIETFFAWHKYKVDKEIEEKEKQAAQNHLVQR 2423
>M.Javanica_Scaff23818g088382 on XP_001348946 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3553
Score = 25.0 bits (53), Expect = 0.72, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 21/36 (58%)
Query: 46 IRQVSFPIFFAICRWKEPPKMEDEKTKLESNHKIQR 81
++ + FFA ++K ++E+++ + NH +QR
Sbjct: 2388 VKSAAIETFFAWHKYKVDKEIEEKEKQAAQNHLVQR 2423
>M.Javanica_Scaff23818g088382 on XP_966160 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2394
Score = 22.7 bits (47), Expect = 5.7, Method: Composition-based stats.
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 17 FQFKVNECLCGPSAKNN 33
F+ K+ +C CG AK N
Sbjct: 1669 FKVKLEKCNCGSDAKGN 1685
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1747g018058
(98 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_820757 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.14
>M.Javanica_Scaff1747g018058 on XP_820757 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 912
Score = 27.3 bits (59), Expect = 0.14, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 52 KCIEAHKLNGFANYGEALLKFCNKQKCNGELDT 84
+C EA K NGF LL +++ GELDT
Sbjct: 114 QCTEAGK-NGFTGIASELLVSADQESLKGELDT 145
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1631g017177
(226 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_817637 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.2
XP_001349033 PfEMP1 (Establishment) [Plasmodium falciparum] 24 7.8
>M.Javanica_Scaff1631g017177 on XP_817637 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 986
Score = 26.9 bits (58), Expect = 1.2, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 49/124 (39%), Gaps = 10/124 (8%)
Query: 61 KWNIQPAYNTFIYAELKLFETEERVDTLDVYQTRWNGSELMKVKQASLSGKNAPMEYLRF 120
++N QP + ++ + VD + VY +NG +L K + S + F
Sbjct: 597 RYNWQPNKTHQVMLQMDFNDWYVYVDRMQVYSGYYNG-DLFKEHRIS---------HFYF 646
Query: 121 SSSINGGLLFHFITDKRVNYRGFEIHFSRKSENNARNLPCPQPFHFATNIPQYLPVFPLE 180
+ GL +T V I+ ++ NA +P P P + ++P+ P E
Sbjct: 647 GAENKEGLESSHVTVSNVLLYNRIIYRIGRTMLNASKVPIPNPGEESRSVPEIPPRPTGE 706
Query: 181 FLGT 184
F T
Sbjct: 707 FEAT 710
>M.Javanica_Scaff1631g017177 on XP_001349033 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2064
Score = 24.3 bits (51), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Query: 26 NDCSCPKEKIFESNVKEGVIKSPG---YPNEYCGSLEC 60
NDC K+ FE N +G + YPN++ +C
Sbjct: 1553 NDCELSKQNKFEKNCNDGSNDNYAFRTYPNDHQTKCDC 1590
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff20612g082988
(127 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001219219 VSG (Establishment) [Trypanosoma brucei] 25 1.3
XP_829794 VSG (Establishment) [Trypanosoma brucei] 25 1.9
XP_805195 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.4
XP_805196 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.4
XP_810389 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.3
XP_809659 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.8
XP_811688 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 9.4
>M.Javanica_Scaff20612g082988 on XP_001219219 VSG (Establishment) [Trypanosoma brucei]
Length = 463
Score = 25.4 bits (54), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 8 PTYQAGTTAAATSTSFLHAGKSLSVSQAGMTGAVTDQLNTNCSTSEKISMN 58
P GT A+ TS L G +L V+ +TG + ++N N + ++++ N
Sbjct: 226 PAQNQGTAASRLGTS-LENGINLEVTPLKITGDLLKKVNANFTAAKQLLQN 275
>M.Javanica_Scaff20612g082988 on XP_829794 VSG (Establishment) [Trypanosoma brucei]
Length = 476
Score = 24.6 bits (52), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 86 HHHRHRSGRITCQDETCCQLSLECGSAST 114
+H R + +C+ ET Q +CGS +T
Sbjct: 389 YHASQRKNKPSCKTETSTQKPQQCGSQTT 417
>M.Javanica_Scaff20612g082988 on XP_805195 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 769
Score = 24.6 bits (52), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 29 SLSVSQAGMTGAVTDQLNTNCSTSEKISMNA 59
SLS+ AG+ ++D N + E + +NA
Sbjct: 506 SLSIPTAGLVAVLSDAANNDTWIDEYLCLNA 536
>M.Javanica_Scaff20612g082988 on XP_805196 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 731
Score = 24.6 bits (52), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 29 SLSVSQAGMTGAVTDQLNTNCSTSEKISMNA 59
SLS+ AG+ ++D N + E + +NA
Sbjct: 468 SLSIPTAGLVAVLSDAANNDTWIDEYLCLNA 498
>M.Javanica_Scaff20612g082988 on XP_810389 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 754
Score = 24.3 bits (51), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 10/79 (12%)
Query: 29 SLSVSQAGMTGAVTDQLNTNCSTSEKISMNARQQEGLVVECRPSPKARKRGISESALHHH 88
SLS+ AG+ A++D + + E + +NA P+ K K G + H
Sbjct: 491 SLSIPTAGLVAALSDAASNDTWIDEYLCLNA--------TVTPNAKKVKDGFQLTG--HS 540
Query: 89 RHRSGRITCQDETCCQLSL 107
S + D+ +SL
Sbjct: 541 SGVSWSVNIPDDNVRHVSL 559
>M.Javanica_Scaff20612g082988 on XP_809659 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 796
Score = 23.5 bits (49), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 30 LSVSQAGMTGAVTDQLNTNCSTSEKISMNA 59
LS+ AG+ ++D N + + E + +NA
Sbjct: 494 LSIPTAGLVAVLSDAANNDTWSDEYLCLNA 523
>M.Javanica_Scaff20612g082988 on XP_811688 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 573
Score = 22.7 bits (47), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 30 LSVSQAGMTGAVTDQLNTNCSTSEKISMNARQQEG 64
LS+S AG+ ++D + E + +NA +G
Sbjct: 494 LSISTAGLVAVLSDTASNGTWIDEYLCLNATVAKG 528
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1723g017848
(233 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_817716 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.9
XP_810496 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.1
>M.Javanica_Scaff1723g017848 on XP_817716 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 948
Score = 25.8 bits (55), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 45 KTKNKNGGNFPSGKDILEVSYSKD 68
K KN++GGN GK + + YSKD
Sbjct: 281 KKKNQDGGNEKDGKTVSLIIYSKD 304
>M.Javanica_Scaff1723g017848 on XP_810496 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 943
Score = 25.4 bits (54), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 45 KTKNKNGGNFPSGKDILEVSYSKD 68
K KN++GGN GK + + YSKD
Sbjct: 264 KKKNQDGGNEKDGKTVSLIIYSKD 287
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff16612g074963
(67 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001347833 Falcipain 3 (Cysteine protease) [Plasmodium falc... 22 3.3
>M.Javanica_Scaff16612g074963 on XP_001347833 Falcipain 3 (Cysteine protease) [Plasmodium
falciparum]
Length = 482
Score = 22.3 bits (46), Expect = 3.3, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Query: 7 KQLLSLVQHSDQVFDQPKTHQLQINIP-ITKKRSYTFVKFPHQ-----NDANPKYLPALN 60
K L++ V+H +Q + KT+ Q N P K+R F++ H+ N+ Y LN
Sbjct: 151 KFLMNNVEHINQFYTFIKTNNKQYNSPNEMKERFQVFLQNAHKVKMHNNNKKSLYKKELN 210
Query: 61 EY 62
+
Sbjct: 211 RF 212
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff19196g080319
(74 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349533 PfEMP3 (Establishment) [Plasmodium falciparum] 23 3.3
XP_809719 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.9
XP_804542 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 7.0
>M.Javanica_Scaff19196g080319 on XP_001349533 PfEMP3 (Establishment) [Plasmodium falciparum]
Length = 2441
Score = 22.7 bits (47), Expect = 3.3, Method: Composition-based stats.
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 33 KTRNSKTRYRQNTERQNKERPKGE 56
K + + +Y++ ER+ +E P GE
Sbjct: 510 KFKKNYKKYQKLLEREKRENPDGE 533
>M.Javanica_Scaff19196g080319 on XP_809719 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 844
Score = 21.9 bits (45), Expect = 5.9, Method: Composition-based stats.
Identities = 8/13 (61%), Positives = 11/13 (84%)
Query: 44 NTERQNKERPKGE 56
+TER+N+E KGE
Sbjct: 378 STERENEENGKGE 390
>M.Javanica_Scaff19196g080319 on XP_804542 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 813
Score = 21.6 bits (44), Expect = 7.0, Method: Composition-based stats.
Identities = 11/51 (21%), Positives = 25/51 (49%)
Query: 13 FFSFLLTVLLVAANCQRVRVKTRNSKTRYRQNTERQNKERPKGETTKIRSR 63
FF+ + + LL + + ++ N KT+ + + +RP T ++ S+
Sbjct: 122 FFTGIASELLELSGENQKKMGGSNLKTKTLEKCPSEGGKRPSQSTNRVGSQ 172
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff22238g085811
(305 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_804800 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 7.4
>M.Javanica_Scaff22238g085811 on XP_804800 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 940
Score = 25.0 bits (53), Expect = 7.4, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 23 QRERKLLHLGIENDPNVQFQCKGA 46
++E+KL+ L +N+ Q C GA
Sbjct: 616 EKEKKLMELSYDNEKKWQLLCGGA 639
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff19737g081371
(83 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609565 variant erythrocyte surface antigen-1, alpha subun... 22 9.0
>M.Javanica_Scaff19737g081371 on XP_001609565 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1341
Score = 21.6 bits (44), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 66 YGSEGECKYSKVVGP 80
+G +GEC+Y K V P
Sbjct: 146 HGKDGECQYLKDVTP 160
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff19565g081040
(135 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAK49521 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum] 24 4.0
XP_001610908 RAP-1 (Adhesin) [Babesia bovis] 24 4.5
XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum] 23 7.0
>M.Javanica_Scaff19565g081040 on AAK49521 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum]
Length = 1210
Score = 23.9 bits (50), Expect = 4.0, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 60/133 (45%), Gaps = 16/133 (12%)
Query: 1 MKIYFHILFFI-LLLLYSIYASHD----ENRRNRQHRQNRRNRDSNANPVSPWRVLLGQA 55
MK YF+I F I L+ LY++ ++ NRQ + +R ++ + + + +
Sbjct: 1 MKGYFNIYFLIPLIFLYNVIRINESIIGRTLYNRQDESSDISRVNSPELNNNHKTNIYDS 60
Query: 56 SREDTQNFALGSY----SPTNRRTNRHRNNQHEVVGDYPTTAEFGDTTDQNVLDNFNSLA 111
ED N + S+ S +R+ NN+ + P + + + D FNSL+
Sbjct: 61 DYEDVNNKLINSFVENKSVKKKRSLSFINNKTKSYDIIPPSYSYRN-------DKFNSLS 113
Query: 112 INDNENNSLATNN 124
N++ + + +NN
Sbjct: 114 ENEDNSGNTNSNN 126
>M.Javanica_Scaff19565g081040 on XP_001610908 RAP-1 (Adhesin) [Babesia bovis]
Length = 565
Score = 23.9 bits (50), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 13/59 (22%)
Query: 84 EVVGDYPTTAEFGDTT-------------DQNVLDNFNSLAINDNENNSLATNNPREIL 129
EVVGD +T E DT ++VL N +ND +N+ +N RE++
Sbjct: 35 EVVGDLTSTLETADTLMTLRDHMHNITKDMKHVLSNGREQIVNDVCSNAPEDSNCREVV 93
>M.Javanica_Scaff19565g081040 on XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2178
Score = 23.5 bits (49), Expect = 7.0, Method: Composition-based stats.
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 97 DTTDQNVLDNFNSLAINDNENNSLATNN 124
DTT N+++ + + + ++NNS NN
Sbjct: 534 DTTKSNIVEKYRNFCNSSDDNNSDQINN 561
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2311g022087
(117 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_806989 Trans-sialidase (Invasion) [Trypanosoma cruzi] 31 0.014
XP_828093 VSG (Establishment) [Trypanosoma brucei] 28 0.15
XP_805548 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.41
XP_829775 VSG (Establishment) [Trypanosoma brucei] 26 0.54
XP_806299 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.90
BAC44837 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 24 2.2
>M.Javanica_Scaff2311g022087 on XP_806989 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 922
Score = 30.8 bits (68), Expect = 0.014, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 1 MILNKLINIILLNILFFILLIKQGYSQEEGGQQMAQIKETDEPLKEESNT-ISKPEESQK 59
++ N+ +N LN L + ++ + AQ EP + +N ++ PE Q
Sbjct: 677 LLYNRALNEAKLNALMKRNTVAAAAAKVPDQEVAAQTTNVSEPSRHPANVPVATPEAQQD 736
Query: 60 EHNKCRSEHSPS 71
+ RS+HSP+
Sbjct: 737 ATSAPRSQHSPA 748
>M.Javanica_Scaff2311g022087 on XP_828093 VSG (Establishment) [Trypanosoma brucei]
Length = 512
Score = 27.7 bits (60), Expect = 0.15, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Query: 35 AQIKETDEP-LKEESNTISKPEESQKEHNKCRSEHSPSNQGLGHGCEL 81
A I ET P LKE T + +N CR H S GLG+ L
Sbjct: 183 ANIDETGYPNLKEGGTTSGTAVQPTDSNNVCRLLHHSSAHGLGNSANL 230
>M.Javanica_Scaff2311g022087 on XP_805548 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1044
Score = 26.6 bits (57), Expect = 0.41, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 27 QEEGGQQMAQIKETDEPLKEESNTISKPEESQKEHNKCRSEHSP 70
Q + Q +++TD + ESN +PEE ++ ++ SP
Sbjct: 824 QPQDPQSAELMEDTDFEMFSESNDTQQPEEDEEADDRSGETTSP 867
>M.Javanica_Scaff2311g022087 on XP_829775 VSG (Establishment) [Trypanosoma brucei]
Length = 503
Score = 26.2 bits (56), Expect = 0.54, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 36 QIKETDEPLKEESNTISKPEESQKEHNKCRSEHSPSNQGLGHGCEL 81
QIK+T E K++ +T+ K ++ +C+ EH+ GC+
Sbjct: 406 QIKQTIEGNKDQCSTVEKEKKQSPSKEECK-EHTEQEACQNAGCKF 450
>M.Javanica_Scaff2311g022087 on XP_806299 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1047
Score = 25.4 bits (54), Expect = 0.90, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 33 QMAQIKE-TDEPLKEESNTISKPEESQKEHNKCRSEHSPSNQGL 75
Q A++ E TD + ESN +PEE + +++ SP L
Sbjct: 835 QPAELTEVTDVEMSPESNDTEQPEEEGEANDRSDGTTSPVASSL 878
>M.Javanica_Scaff2311g022087 on BAC44837 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 1566
Score = 24.3 bits (51), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 38 KETDEPLKEESNTISKPEESQKEHNKCRSEHSPSNQG-LGHGCELIITILCDLHCTSETQ 96
KE D+ KE +T+S+ E ++++ E +P+ +G +G E++ + H T ++
Sbjct: 1011 KEVDDAKKELQSTVSRIESNEQDVQSTPPEDTPTVEGKVGDKAEMLTSP----HATDNSE 1066
Query: 97 KSKG 100
G
Sbjct: 1067 SESG 1070
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff20314g082436
(74 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff23153g087349
(263 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_812771 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.67
XP_001351876 PfEMP1 (Establishment) [Plasmodium falciparum] 27 1.5
>M.Javanica_Scaff23153g087349 on XP_812771 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 924
Score = 28.1 bits (61), Expect = 0.67, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 106 KKRKAKEEEDEVYEVKNDKVKEEKNKEDKDTVNV 139
K+ KE+E+ + EVK +V EE ED+ V+V
Sbjct: 130 KQTADKEKEEVLNEVKETQVLEEVTSEDRKKVDV 163
>M.Javanica_Scaff23153g087349 on XP_001351876 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3164
Score = 26.9 bits (58), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
Query: 165 GDELDIYL---RILVGWLSYKQNKLGICIGSVIGYFCVRRYNRKKAELAIRK 213
GDE D R L G + + +LGIC + GY+ RY K + +RK
Sbjct: 1634 GDEKDYAFLKKRNLSGEVFFPSRRLGICFRGLDGYY---RYPEVKDKDTLRK 1682
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff21181g084016
(161 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BAC44837 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 25 3.3
>M.Javanica_Scaff21181g084016 on BAC44837 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 1566
Score = 24.6 bits (52), Expect = 3.3, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 52 KNCKNFYKPEIYDRFDELGKQFINC 76
KNC N +I+D+ D+L K+ +C
Sbjct: 702 KNCSNIDFTKIFDQLDKLFKERCSC 726
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2019g020067
(156 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350409 PfEMP1 (Establishment) [Plasmodium falciparum] 26 1.6
XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum] 25 2.9
XP_001351319 PfEMP1 (Establishment) [Plasmodium falciparum] 23 7.0
XP_001347691 PfEMP1 (Establishment) [Plasmodium falciparum] 23 8.8
>M.Javanica_Scaff2019g020067 on XP_001350409 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2223
Score = 25.8 bits (55), Expect = 1.6, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 126 FRVDLSSDGCRNPSGWNIANKTS 148
F+V + DGCR + N NKT+
Sbjct: 1407 FKVKCNGDGCRGGANGNTCNKTT 1429
>M.Javanica_Scaff2019g020067 on XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2178
Score = 24.6 bits (52), Expect = 2.9, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 61 SGNVDTSAEVNIINAKAAGIENVDIY 86
SG D + +++IN +G NVDIY
Sbjct: 1913 SGKNDVYSGIDLINDTLSGNHNVDIY 1938
>M.Javanica_Scaff2019g020067 on XP_001351319 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2646
Score = 23.5 bits (49), Expect = 7.0, Method: Composition-based stats.
Identities = 9/26 (34%), Positives = 18/26 (69%)
Query: 61 SGNVDTSAEVNIINAKAAGIENVDIY 86
SG D+ + +++IN +G +++DIY
Sbjct: 2450 SGKHDSYSGIDLINDTLSGNQHIDIY 2475
>M.Javanica_Scaff2019g020067 on XP_001347691 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2182
Score = 23.5 bits (49), Expect = 8.8, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 45 EKFSKKFVIVNA--NYYDSGNVDTSAEVNIINAKAAGIENVDIY 86
E++S +VN+ + SG D + +++IN +G E +DIY
Sbjct: 1953 EEYSYNVNMVNSMNDIPMSGKNDVYSGIDLINDSLSGGEPIDIY 1996
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff19354g080621
(60 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff17294g076410
(105 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_807986 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.28
XP_817842 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.6
XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum] 24 1.7
XP_815156 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.2
XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum] 24 2.5
XP_815822 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.2
XP_001610196 variant erythrocyte surface antigen-1, alpha subun... 23 4.9
XP_001609566 variant erythrocyte surface antigen-1, beta subuni... 23 6.1
XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum] 23 6.8
>M.Javanica_Scaff17294g076410 on XP_807986 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1054
Score = 26.6 bits (57), Expect = 0.28, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 27/72 (37%), Gaps = 7/72 (9%)
Query: 32 SKKKSATKSQIQKQALVDSRKSKENIPLKEGPAPGEKPAAAAKGRQQKQLKTPPPQPAKG 91
+ + + +S + L + K+ P P P+ A G + P+PA
Sbjct: 742 ASESRSEESATSHEKLTEDDTDKQEEESVHNPVPAAPPSTVAAG-------SSVPKPATA 794
Query: 92 AEIGGGGAARNN 103
AEI G +N
Sbjct: 795 AEIAGNSLPEDN 806
>M.Javanica_Scaff17294g076410 on XP_817842 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 897
Score = 24.6 bits (52), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 8/61 (13%)
Query: 26 LLCCCKSKKKSATKSQIQKQALVDSRKSKENIPLKEGPAPGEKPAAAAKGRQQKQLKTPP 85
LL K K+Q++ Q LV+ KEN +E AA A + +K+++
Sbjct: 128 LLALTDKASKELVKAQMRTQVLVECSSDKENCASRE--------AALAVSQSEKKVRVRQ 179
Query: 86 P 86
P
Sbjct: 180 P 180
>M.Javanica_Scaff17294g076410 on XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2238
Score = 24.3 bits (51), Expect = 1.7, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
Query: 58 PLKEGPAPGEKPAAAAKGRQQKQLKTPPPQPAK 90
P + P +KPAA ++ RQ + K PPP AK
Sbjct: 1677 PAQTAP---KKPAADSE-RQTPEEKLPPPPAAK 1705
>M.Javanica_Scaff17294g076410 on XP_815156 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 966
Score = 24.3 bits (51), Expect = 2.2, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 63 PAPGEKPAAAAKGRQQKQLKTP-PPQPAKGAEIGGGGAARNN 103
P +P AA + + P P+P KG E G G A N+
Sbjct: 765 PDVDTQPTLAAVSETTRHGQQPLKPEPLKGEEGTGSGGASNS 806
>M.Javanica_Scaff17294g076410 on XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3119
Score = 23.9 bits (50), Expect = 2.5, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 32 SKKKSATKSQIQKQALVDSRKSKENIPLKE 61
S +K+ T K+ S+ SK NIPL E
Sbjct: 2103 SMQKNLTDKYKYKEVKFTSKSSKHNIPLSE 2132
>M.Javanica_Scaff17294g076410 on XP_815822 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 884
Score = 23.1 bits (48), Expect = 4.2, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 7/69 (10%)
Query: 26 LLCCCKSKKKSATKSQIQKQALVDSRKSKENIPLKEGPAPGEKPAAAAKGRQQKQLKTPP 85
LL + K SQ++ Q LV+ K+N A+A ++K L + P
Sbjct: 184 LLTLTGQESKELVTSQVKTQVLVECPSDKKN-------CVSHSEASAGSQSEKKVLVSRP 236
Query: 86 PQPAKGAEI 94
+G++I
Sbjct: 237 TTVVQGSDI 245
>M.Javanica_Scaff17294g076410 on XP_001610196 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1330
Score = 23.1 bits (48), Expect = 4.9, Method: Composition-based stats.
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 65 PGEKPAAAAKGRQQKQLK 82
PG+ ++A G +QK+LK
Sbjct: 516 PGDTASSATSGNEQKELK 533
>M.Javanica_Scaff17294g076410 on XP_001609566 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1062
Score = 22.7 bits (47), Expect = 6.1, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 29 CCKSKKKSATKSQIQKQALVDSRKSKENIP-LKEG 62
C K K+K + +++K A D+ K++ + LKEG
Sbjct: 465 CPKHKEKPHERCKLEKSANTDTTKAQSSTSELKEG 499
>M.Javanica_Scaff17294g076410 on XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2980
Score = 22.7 bits (47), Expect = 6.8, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 6/48 (12%)
Query: 16 VAVSLSGSVSLLCCCKSKKKSATKSQIQKQALVDSRKSKENIPLKEGP 63
VA++L GS++ L K TKS I +++ KS NIP K P
Sbjct: 2532 VALAL-GSIAFLFL-----KKKTKSTIDLLRVINIPKSDYNIPTKLSP 2573
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff23671g088154
(53 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_816886 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 3.5
XP_805204 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 3.5
XP_804512 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 3.6
XP_821102 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 3.7
XP_805733 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 3.9
XP_817637 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.0
XP_820141 Trans-sialidase (Invasion) [Trypanosoma cruzi] 21 5.0
>M.Javanica_Scaff23671g088154 on XP_816886 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 905
Score = 21.6 bits (44), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Query: 12 TSVEP-TGTSWNSVRWARPSGV 32
T V+P TG W S +W P+ V
Sbjct: 29 TDVDPFTGIGWTSSQWEAPTKV 50
>M.Javanica_Scaff23671g088154 on XP_805204 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 978
Score = 21.6 bits (44), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Query: 12 TSVEP-TGTSWNSVRWARPSGV 32
T V+P TG W S +W P+ V
Sbjct: 31 TDVDPFTGIGWTSSQWEAPTKV 52
>M.Javanica_Scaff23671g088154 on XP_804512 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 310
Score = 21.6 bits (44), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Query: 12 TSVEP-TGTSWNSVRWARPSGV 32
T V+P TG W S +W P+ V
Sbjct: 61 TDVDPFTGIGWTSSQWEAPTKV 82
>M.Javanica_Scaff23671g088154 on XP_821102 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 929
Score = 21.6 bits (44), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Query: 12 TSVEP-TGTSWNSVRWARPSGV 32
T+V+P TG W S +W P+ V
Sbjct: 30 TAVDPFTGIGWTSSQWEAPTKV 51
>M.Javanica_Scaff23671g088154 on XP_805733 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 823
Score = 21.6 bits (44), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Query: 12 TSVEP-TGTSWNSVRWARPSGV 32
T+V+P TG W S +W P+ V
Sbjct: 30 TAVDPFTGIGWTSSQWEAPTKV 51
>M.Javanica_Scaff23671g088154 on XP_817637 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 986
Score = 21.6 bits (44), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Query: 12 TSVEP-TGTSWNSVRWARPSGV 32
T V+P TG W S +W P+ V
Sbjct: 31 TDVDPFTGIGWTSSQWEAPTKV 52
>M.Javanica_Scaff23671g088154 on XP_820141 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 925
Score = 21.2 bits (43), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Query: 18 GTSWNSVR-WARPSGVGGYRTSRLASAFETVSPQ 50
G S++S R W G G T++L+S +ET +PQ
Sbjct: 608 GLSYDSERKWHVLCG-DGKTTTKLSSTWETETPQ 640
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2136g020910
(450 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Q4U925 Casein kinase II alpha (Establishment) [Theileria annu... 27 1.8
AAC80459 Oligopeptidase B (Others) [Trypanosoma brucei] 26 4.5
XP_821714 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 7.8
>M.Javanica_Scaff2136g020910 on Q4U925 Casein kinase II alpha (Establishment) [Theileria
annulata]
Length = 348
Score = 27.3 bits (59), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/168 (19%), Positives = 64/168 (38%), Gaps = 32/168 (19%)
Query: 213 NRKMKKALETHTPQEMRIIAYNLIIKISMCAAKALQHFHKYGIHLDIKSSNFVTLPKHNK 272
N K T T Q+++ Y L+ ++ C ++ + +H DIK N +
Sbjct: 134 NTDFKTLYPTLTIQDIKYYIYQLLKAMNYCHSQGI-------MHRDIKPHNVM------- 179
Query: 273 NEEKLKEKENDSIEEIEDDQLECKIIDFNTSVLFPAENAVAIKWYANGTRLYKAPEIRQT 332
I+ ++ ++ID+ + + E +++ TR YK PE+
Sbjct: 180 ---------------IDHEKKILRLIDWGLAEFYHPEQEYSVR---VATRYYKGPELLVD 221
Query: 333 NLNENYNKQFYEDDYVLLDVQLEKIRFEKYETQLDQIIKACIQLKPEN 380
+Y+ + +L + +K F DQ++K L E+
Sbjct: 222 MRYYDYSLDIWSIGCMLAGIIFKKEPFFYGHDNYDQLVKIAKVLGTED 269
>M.Javanica_Scaff2136g020910 on AAC80459 Oligopeptidase B (Others) [Trypanosoma brucei]
Length = 715
Score = 26.2 bits (56), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Query: 43 YGKDVERKTNKASTSIERGLSPEIQEQSESEESVIVNTSFDEGKCYCKKYTIEELNEEIV 102
Y +DV+ + K + G +P + E EE V+ EGK +C + E
Sbjct: 104 YTRDVKGLSYKLHCRVPAGKTPG---EGEDEEIVLDENKLAEGKSFCVVGCVAPAPPEHA 160
Query: 103 IKNISLIYKKDE 114
+ S+ Y DE
Sbjct: 161 LVAYSVDYCGDE 172
>M.Javanica_Scaff2136g020910 on XP_821714 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 827
Score = 25.4 bits (54), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 29/61 (47%)
Query: 296 KIIDFNTSVLFPAENAVAIKWYANGTRLYKAPEIRQTNLNENYNKQFYEDDYVLLDVQLE 355
K +D S L P ENA+ N +K E L+ N++ ++D+Y+ ++ +
Sbjct: 465 KEVDKRVSKLCPTENALEDTSTGNACGAFKITEGLVGFLSGNFSDGTWKDEYLGVNATVN 524
Query: 356 K 356
K
Sbjct: 525 K 525
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2301g022021
(326 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_812042 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.3
AAM47192 Rh4 (Adhesin) [Plasmodium falciparum] 27 2.9
AAM47175 Rh4 (Adhesin) [Plasmodium falciparum] 26 2.9
AAM47174 Rh4 (Adhesin) [Plasmodium falciparum] 26 3.0
XP_001348249 Plasmepsin I (Proteases) [Plasmodium falciparum] 25 4.5
XP_001350409 PfEMP1 (Establishment) [Plasmodium falciparum] 25 5.4
XP_820670 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 7.2
XP_966160 PfEMP1 (Establishment) [Plasmodium falciparum] 25 9.7
>M.Javanica_Scaff2301g022021 on XP_812042 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 227
Score = 26.2 bits (56), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 7 LFYLKILLFVLSIIYSATQSIAAETSPSSMADPQSSSDKNSPDKTNETKLPLLDKNTSKF 66
LFY ++LLF+L ++ S ++ D +S +SP K + + D+ S
Sbjct: 43 LFYSEVLLFLLFVMM-------CRGSGATATDKPNSCQGSSPGKYFDWRDTKGDETVSLL 95
Query: 67 RKSNFIK 73
R +F++
Sbjct: 96 RVPSFVE 102
>M.Javanica_Scaff2301g022021 on AAM47192 Rh4 (Adhesin) [Plasmodium falciparum]
Length = 1716
Score = 26.6 bits (57), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 78/169 (46%), Gaps = 27/169 (15%)
Query: 156 KNFNQLYS--SLEFVNVKENFDNLVEIIKKIKKGVGKPILDLNKVECVLKLLEKFEERSV 213
KN +Q Y+ SL FV+ N +++ I + K G K L+ +E ++K E E S
Sbjct: 1120 KNISQNYNNHSLSFVHSINN--HMLSIFQDTKYGKHKNQQILSDIENIIKQNEHTE--SY 1175
Query: 214 KYTESLNEEDIEKEVRAFQQILDLKVAIKSGYLRYIYMEELCRNLDTYYDKDNEYKVYLD 273
K ++ N + I+++++ F QI + L N+ T+ +N+YK +
Sbjct: 1176 KNLDTSNIQLIKEQIKYFLQIFHI----------------LQENITTF---ENQYKDLII 1216
Query: 274 GLCERARPTLRKIRGIILAKNKDEGKKKQKIIFGDYDKGHKNVKRISEA 322
+ + L+ I I++ N + ++Q I+ + K +K +S+
Sbjct: 1217 KMNHKINNNLKDITHIVI--NDNNTLQEQNRIYNELQNKIKQIKNVSDV 1263
>M.Javanica_Scaff2301g022021 on AAM47175 Rh4 (Adhesin) [Plasmodium falciparum]
Length = 1711
Score = 26.2 bits (56), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 78/169 (46%), Gaps = 27/169 (15%)
Query: 156 KNFNQLYS--SLEFVNVKENFDNLVEIIKKIKKGVGKPILDLNKVECVLKLLEKFEERSV 213
KN +Q Y+ SL FV+ N +++ I + K G K L+ +E ++K E E S
Sbjct: 1121 KNISQNYNNHSLSFVHSINN--HMLSIFQDTKYGKHKNQQILSDIENIIKQNEHTE--SY 1176
Query: 214 KYTESLNEEDIEKEVRAFQQILDLKVAIKSGYLRYIYMEELCRNLDTYYDKDNEYKVYLD 273
K ++ N + I+++++ F QI + L N+ T+ +N+YK +
Sbjct: 1177 KNLDTSNIQLIKEQIKYFLQIFHI----------------LQENITTF---ENQYKDLII 1217
Query: 274 GLCERARPTLRKIRGIILAKNKDEGKKKQKIIFGDYDKGHKNVKRISEA 322
+ + L+ I I++ N + ++Q I+ + K +K +S+
Sbjct: 1218 KMNHKINNNLKDITHIVI--NDNNTLQEQNRIYNELQNKIKQIKNVSDV 1264
>M.Javanica_Scaff2301g022021 on AAM47174 Rh4 (Adhesin) [Plasmodium falciparum]
Length = 1711
Score = 26.2 bits (56), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 78/169 (46%), Gaps = 27/169 (15%)
Query: 156 KNFNQLYS--SLEFVNVKENFDNLVEIIKKIKKGVGKPILDLNKVECVLKLLEKFEERSV 213
KN +Q Y+ SL FV+ N +++ I + K G K L+ +E ++K E E S
Sbjct: 1119 KNISQNYNNHSLSFVHSINN--HMLSIFQDTKYGKHKNQQILSDIENIIKQNEHTE--SY 1174
Query: 214 KYTESLNEEDIEKEVRAFQQILDLKVAIKSGYLRYIYMEELCRNLDTYYDKDNEYKVYLD 273
K ++ N + I+++++ F QI + L N+ T+ +N+YK +
Sbjct: 1175 KNLDTSNIQLIKEQIKYFLQIFHI----------------LQENITTF---ENQYKDLII 1215
Query: 274 GLCERARPTLRKIRGIILAKNKDEGKKKQKIIFGDYDKGHKNVKRISEA 322
+ + L+ I I++ N + ++Q I+ + K +K +S+
Sbjct: 1216 KMNHKINNNLKDITHIVI--NDNNTLQEQNRIYNELQNKIKQIKNVSDV 1262
>M.Javanica_Scaff2301g022021 on XP_001348249 Plasmepsin I (Proteases) [Plasmodium falciparum]
Length = 452
Score = 25.4 bits (54), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
Query: 123 DNLTENDIPHI-YYPDPQIKDNNKDKFHLVME 153
D++T ND+ ++ YY + QI D NK KF + +
Sbjct: 127 DSVTLNDVANVMYYGEAQIGD-NKQKFAFIFD 157
>M.Javanica_Scaff2301g022021 on XP_001350409 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2223
Score = 25.4 bits (54), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 95 KLADTEMKALELEEKSKKLNKLARKFIKDNLTENDIPHIYYPDPQIKDNNKDKFHLVMEY 154
K+ D E L+ + S+ + K + ++ + DIP P+ DNN++K ++ +
Sbjct: 1913 KITDNEWNTLKDDFISQYIQSEQPKDVPNDYSSGDIPFNTQPNTLYIDNNQEKPFIMSIH 1972
Query: 155 SKNFNQLYSSLEF---VNVKENFDNLVEIIKKIKKGV 188
+N LY+ E+ VN+ + D+ + + G+
Sbjct: 1973 DRN---LYTGEEYSYNVNMVNSMDDTKYVSNNVYSGI 2006
>M.Javanica_Scaff2301g022021 on XP_820670 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 883
Score = 25.0 bits (53), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 43/104 (41%), Gaps = 23/104 (22%)
Query: 142 DNNKDKFHLVMEYSKNFNQLYSSLEFVNVKENFDNLVEIIKKIKKGVGKPILDLNKVECV 201
DNN++ L+ Y K + SSL V+V+ L E ++++K V
Sbjct: 431 DNNEE---LIALYKKKKDDAESSLGMVSVR-----LTEQLQRVKD--------------V 468
Query: 202 LKLLEKFEERSVKYTESLNEEDIEKE-VRAFQQILDLKVAIKSG 244
L +K +ER K S EED E +I D V SG
Sbjct: 469 LATWKKVDERVSKLCTSSAEEDTSTENACTTGKITDGLVGFLSG 512
>M.Javanica_Scaff2301g022021 on XP_966160 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2394
Score = 24.6 bits (52), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Query: 78 SNFYRYLVKESS---KKGKEKLADTEMKALELEEKSKKLNKLARKFIKDNLTEND 129
S Y LVK+ + KKGKEK + ++K K+ K R + KD T+ D
Sbjct: 1032 SKLYGELVKDCASCKKKGKEKCTQGDNDCTPCDKKCKEYGKKIRTW-KDQWTKMD 1085
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff18970g079845
(724 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_814492 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 2.4
Q4U925 Casein kinase II alpha (Establishment) [Theileria annu... 26 7.7
XP_814755 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 9.3
>M.Javanica_Scaff18970g079845 on XP_814492 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 923
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 33/86 (38%)
Query: 262 GDGTTLNTQAIQKAIDSCSSSTSAFGCKVLIPKGIFLSGPLFLRSQMTFELANGAILRAT 321
G+G+ Q S ++ +A KVL KG GP R A+G T
Sbjct: 807 GEGSADTIQGDGPHTPSVGNTAAAADTKVLTAKGEGHDGPALTRDVSVSSGADGETAGGT 866
Query: 322 SNPSKFPNQYGNTPSAFLNALNGSLT 347
Q G SA L++ G+L+
Sbjct: 867 DGQEGIHPQNGEVKSAALSSSLGNLS 892
>M.Javanica_Scaff18970g079845 on Q4U925 Casein kinase II alpha (Establishment) [Theileria
annulata]
Length = 348
Score = 26.2 bits (56), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 9/46 (19%)
Query: 140 PLAYDQKSVWLTWNKPDNYENIADFNVYMGGKKIGSAKANSAVNTL 185
P +D +++ L WN PD+YE + +KIG K + L
Sbjct: 37 PEYWDYENITLKWNVPDSYEIV---------RKIGRGKFSEVFEGL 73
>M.Javanica_Scaff18970g079845 on XP_814755 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 934
Score = 26.2 bits (56), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 32/89 (35%)
Query: 260 ATGDGTTLNTQAIQKAIDSCSSSTSAFGCKVLIPKGIFLSGPLFLRSQMTFELANGAILR 319
A G+G+ TQ S + +A VL KG GP A+G
Sbjct: 817 AVGEGSADTTQGDGPHTPSVGDTPAAADTNVLTAKGEGHDGPALTADVSVSSGADGETAG 876
Query: 320 ATSNPSKFPNQYGNTPSAFLNALNGSLTN 348
T Q G SA L++ G+L+
Sbjct: 877 GTDGQEGIHPQNGEVKSAALSSSLGNLSQ 905
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1662g017417
(99 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_819737 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.7
XP_806744 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.1
AAK31224 variable surface protein 7a (Establishment) [Giardia... 22 5.6
XP_001349207 EBA-175 (Adhesin) [Plasmodium falciparum] 23 5.7
>M.Javanica_Scaff1662g017417 on XP_819737 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1112
Score = 23.5 bits (49), Expect = 2.7, Method: Composition-based stats.
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 62 RDPCCIAYTFDEENHRCFMKSAISNSF 88
RDP + + DE++ R FM + + +
Sbjct: 365 RDPTLVKWREDEDDERLFMMAHCAGGY 391
>M.Javanica_Scaff1662g017417 on XP_806744 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 789
Score = 23.5 bits (49), Expect = 3.1, Method: Composition-based stats.
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 62 RDPCCIAYTFDEENHRCFMKSAISNSF 88
RDP + + DE++ R FM + + +
Sbjct: 40 RDPTLVRWEEDEDDERLFMMAHCAGGY 66
>M.Javanica_Scaff1662g017417 on AAK31224 variable surface protein 7a (Establishment) [Giardia
duodenalis]
Length = 127
Score = 22.3 bits (46), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 11/24 (45%)
Query: 40 LNGGTYDEFNAPEIKQCCIACARD 63
NG TY N P + C CA D
Sbjct: 12 ANGQTYASGNCPACAEGCAKCATD 35
>M.Javanica_Scaff1662g017417 on XP_001349207 EBA-175 (Adhesin) [Plasmodium falciparum]
Length = 1462
Score = 22.7 bits (47), Expect = 5.7, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 66 CIAYTFDEENHRCFMKSAISN 86
C FD+ ++ CF K A S+
Sbjct: 1402 CTKREFDDPSYTCFRKEAFSS 1422
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2193g021274
(525 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350415 PfEMP1 (Establishment) [Plasmodium falciparum] 28 1.9
XP_001349517 PfEMP1 (Establishment) [Plasmodium falciparum] 27 3.1
XP_820663 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 3.3
>M.Javanica_Scaff2193g021274 on XP_001350415 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3056
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 368 MEKEEIKEEKETSTLQTINIDSENEKNNLESYKIIANSSSFHYPPQNNPIKVPPSSASAE 427
ME++E + + STL I+ K N E+Y II+ ++ + +P Q P+++ S+
Sbjct: 2957 MERKEYLLDIQPSTLDDIH------KINDETYNIISTNNIYDHPSQETPLQLLGSTNI-- 3008
Query: 428 LAEFLLSEQRPNIKS 442
+ ++ +EQ +++
Sbjct: 3009 IPSYITTEQNNGLRT 3023
>M.Javanica_Scaff2193g021274 on XP_001349517 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 440
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 368 MEKEEIKEEKETSTLQTINIDSENEKNNLESYKIIANSSSFHYPPQNNPIKVPPSSASAE 427
ME++E + + STL I+ K N E+Y II+ ++ + +P Q P+++ S+
Sbjct: 341 MERKEYLLDIQPSTLDDIH------KINDETYNIISTNNIYDHPSQETPLQLLGSTNI-- 392
Query: 428 LAEFLLSEQRPNIKS 442
+ ++ +EQ +++
Sbjct: 393 IPSYITTEQNNGLRT 407
>M.Javanica_Scaff2193g021274 on XP_820663 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 928
Score = 26.9 bits (58), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 256 LFEANIWKPKNLFSKKIYIDASGEEFSCKRQRLETFCENGNKR 298
L +AN WK N S D S E+ K+ + T C++G +R
Sbjct: 281 LKDANSWKLSNGMSADGCSDPSVVEWKDKKLIMMTACDDGRRR 323
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff19370g080645
(94 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351435 PfEMP1 (Establishment) [Plasmodium falciparum] 23 2.6
AAY40294 Pyroglutamyl peptidase I (Others) [Trypanosoma brucei] 23 3.2
XP_806989 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 6.5
XP_001610714 variant erythrocyte surface antigen-1, alpha subun... 22 7.7
XP_001609167 variant erythrocyte surface antigen-1, alpha subun... 22 7.8
>M.Javanica_Scaff19370g080645 on XP_001351435 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2209
Score = 23.5 bits (49), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 34 NIESLWSTYKRKFRPQAGNNCNTYHTYFPEFLWRKRFGDIS 74
N+ + S+ RK R G+N N Y F E L G++
Sbjct: 417 NVINGTSSSSRKTRAARGSNVNGYEKIFYEKLKEGNVGNLD 457
>M.Javanica_Scaff19370g080645 on AAY40294 Pyroglutamyl peptidase I (Others) [Trypanosoma brucei]
Length = 222
Score = 23.1 bits (48), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 12 SHFTVNHSENYVNPENPDVHTQNIESLWSTYKRKFRPQAGN 52
+H H EN V N +H++ E + R F GN
Sbjct: 68 AHLEATHPENRVLLVNVGLHSREKEKVLRLEVRAFNELEGN 108
>M.Javanica_Scaff19370g080645 on XP_806989 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 922
Score = 22.3 bits (46), Expect = 6.5, Method: Composition-based stats.
Identities = 9/18 (50%), Positives = 12/18 (66%), Gaps = 1/18 (5%)
Query: 64 FLWRKRFGDISNVFYNFW 81
F W K+F D S + Y+FW
Sbjct: 182 FEW-KQFADTSKLPYDFW 198
>M.Javanica_Scaff19370g080645 on XP_001610714 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1231
Score = 22.3 bits (46), Expect = 7.7, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 8 PENYSHFTVNHSENYVNPENPDVHTQNIESLWSTY 42
P N S T+ S +YV+P +++T + TY
Sbjct: 984 PTNTSLSTLTDSNHYVSPLTGELYTAVSATFGGTY 1018
>M.Javanica_Scaff19370g080645 on XP_001609167 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1317
Score = 22.3 bits (46), Expect = 7.8, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 8 PENYSHFTVNHSENYVNPENPDVHTQNIESLWSTY 42
P N S T+ S +YV+P +++T + TY
Sbjct: 1068 PTNTSLSTLTDSNHYVSPLTGELYTAVSATFGGTY 1102
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff18052g077957
(363 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ABA06445 MSA-2a/b (Invasion) [Babesia bovis] 32 0.045
XP_804800 Trans-sialidase (Invasion) [Trypanosoma cruzi] 31 0.13
XP_820135 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.26
XP_001349219 PfEMP1 (Establishment) [Plasmodium falciparum] 30 0.33
XP_001351564 PfEMP1 (Establishment) [Plasmodium falciparum] 29 0.40
XP_001611441 variant erythrocyte surface antigen-1, beta subuni... 28 1.1
XP_811897 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 1.2
XP_813237 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 1.2
XP_810286 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.7
ABR92024 MSA-1 (Invasion) [Babesia bovis] 27 1.9
XP_001348165 RESA (Others) [plasmodium falciparum] 27 2.5
XP_810391 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.9
XP_816389 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 4.5
XP_808957 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 4.8
ABA06449 MSA-2a/b T-2 (Invasion) [Babesia bovis] 25 5.1
XP_808062 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 5.3
XP_813586 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 5.9
XP_817333 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.0
XP_817877 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.7
XP_807593 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.7
ABA06443 MSA-2a/b (Invasion) [Babesia bovis] 25 8.3
XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum] 25 8.3
XP_821388 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 8.5
XP_001351079 PfEMP1 (Establishment) [Plasmodium falciparum] 25 9.1
XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum] 25 9.1
ABA06447 MSA-2a/b (Invasion) [Babesia bovis] 25 9.2
>M.Javanica_Scaff18052g077957 on ABA06445 MSA-2a/b (Invasion) [Babesia bovis]
Length = 274
Score = 32.0 bits (71), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 19/141 (13%)
Query: 12 IFLEIVESTPTHYETLNVPFNA----STEKIKANYRELMMKYHPDK-NKNNPKAKEIAQR 66
+F ++E P L + FNA + ++I AN M KY+ + +K + K K+
Sbjct: 111 VFKSLLERVPLIKSKL-IAFNAFLHDNPQRIMANQDGEMTKYYKEHISKEDVKVKDYTFL 169
Query: 67 LNGAYKILTDEQERTKYDKGLHT-----------SSGSSHTTSGGSSTT--SAGSSATNR 113
+ L DE K K L S +H++ G++TT S S+A N
Sbjct: 170 VKFCNDFLDDESPFMKMYKALKEYDELVNSAPAHSPSPTHSSPQGTTTTQPSQDSAAPNT 229
Query: 114 GATTTSARPSATHARPAATPE 134
A ++S + ++PA TP+
Sbjct: 230 SAESSSGNLNGQPSKPAETPK 250
>M.Javanica_Scaff18052g077957 on XP_804800 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 940
Score = 30.8 bits (68), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 8/111 (7%)
Query: 88 HTSSGSSHTTSGGSSTTSAGSSATNRGATTTSARPSATHARPAATPEKSSTTS----KRS 143
TS G + T GGSS+ + G T RP A AT + ++ T+ K
Sbjct: 802 ETSPGGTKTVDGGSSSNGDQTVEAEAGDTVPGDRPPQAPAGTPATADANTPTATGKRKVD 861
Query: 144 SATSSGSSTASGRSSKTTAGGTSSVGTQGTSSQSSPSPLNFDLVSGYFQNV 194
A ++G S +SG + +T GG + Q QS LN ++ NV
Sbjct: 862 PAVTTGVSASSGGNEETAGGGDA----QKEEVQSQDGELNATALNSSLGNV 908
>M.Javanica_Scaff18052g077957 on XP_820135 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1519
Score = 30.0 bits (66), Expect = 0.26, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 10/88 (11%)
Query: 109 SATNRGATTTSARPSATHARPAATPEKSSTTSKRSSATSSG-----SSTASGRSSKTTAG 163
SA + A SA P A + + T + +SATSS +S S + T G
Sbjct: 1395 SAEPKPAEPKSAEPKPAEPNAATSSAREGTAGQPASATSSDGHEAVTSVTSSSVAITDVG 1454
Query: 164 GTSS-----VGTQGTSSQSSPSPLNFDL 186
+SS VGT+G + + P F +
Sbjct: 1455 ASSSDDAQTVGTEGGAVMQADQPTQFSV 1482
Score = 25.8 bits (55), Expect = 4.9, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Query: 110 ATNRGATTTSARPSATHARPAATPEKSSTTSKRSSATSSGSSTASGRSSKTTAGGTSSVG 169
A + A A P + +PA ++ ++ATSS +G+ A TSS G
Sbjct: 1381 AEPKPAEPKPAEPKSAEPKPAEPKSAEPKPAEPNAATSSAREGTAGQP----ASATSSDG 1436
Query: 170 TQGTSSQSSPS 180
+ +S +S S
Sbjct: 1437 HEAVTSVTSSS 1447
Score = 25.4 bits (54), Expect = 6.9, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 26/72 (36%)
Query: 109 SATNRGATTTSARPSATHARPAATPEKSSTTSKRSSATSSGSSTASGRSSKTTAGGTSSV 168
SA + A A P +PA S +++ SA S + S S
Sbjct: 1040 SAEPKSAEPKPAEPKPAEPKPAEQKSAESKPAEQKSAESKPAEQKSAESKPAEPKSAEPK 1099
Query: 169 GTQGTSSQSSPS 180
+ S++S P+
Sbjct: 1100 PAEQKSAESKPA 1111
>M.Javanica_Scaff18052g077957 on XP_001349219 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2595
Score = 29.6 bits (65), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 46/111 (41%), Gaps = 21/111 (18%)
Query: 97 TSGGSST-TSAGSSATNRGATTTSARPSATHARPAATPEKSSTTSKRSSATSSGSSTASG 155
TSGG T TS GSS + R S S + AT S GS
Sbjct: 936 TSGGDKTATSEGSSESGRRIAKRSVETSGSSGGSGAT------------GKSDGSICIPP 983
Query: 156 RSSKTTAGGT------SSVGTQGTSSQSSPSPLNFDLVSGYFQN--VVNFF 198
R K GG +SV ++ T++ SSPSP L++ + ++ V FF
Sbjct: 984 RRRKLYLGGFKRLTDGTSVSSEPTTATSSPSPKGDSLLTAFVESAAVETFF 1034
>M.Javanica_Scaff18052g077957 on XP_001351564 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2207
Score = 29.3 bits (64), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 6/89 (6%)
Query: 97 TSGGSSTT-----SAGSSATNRGATTTSARPSATHARPAATPEKSSTTSKRSSATSSGSS 151
TSGG T S GS AT G+ R + P T TT + A S G++
Sbjct: 886 TSGGEKATGGSGESTGSDATTGGSICVPPRRRRLYVTPLTTWASGGTTQVETQA-SGGNT 944
Query: 152 TASGRSSKTTAGGTSSVGTQGTSSQSSPS 180
S S +TT G + ++ ++ PS
Sbjct: 945 ETSQVSGETTPQGQTPSESEAQTASQDPS 973
>M.Javanica_Scaff18052g077957 on XP_001611441 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1205
Score = 27.7 bits (60), Expect = 1.1, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 17/40 (42%)
Query: 87 LHTSSGSSHTTSGGSSTTSAGSSATNRGATTTSARPSATH 126
LH + G +TT G SS + + RG T P H
Sbjct: 1065 LHDAGGKFYTTFGKSSIRAPWAQQCTRGNTVVGGEPKKCH 1104
>M.Javanica_Scaff18052g077957 on XP_811897 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 879
Score = 27.7 bits (60), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 100 GSSTTSAGSSATNRGATTTSARPSATHARPAATPEKSSTTSKRSSATSSGSSTASGRSS- 158
G+S+ GS T RG + S+ + A P+A P T S S+ S ASG+SS
Sbjct: 739 GTSSALDGSHLTERGQSMGSSGVNGGGASPSAVP----TVSTPSAGKDSLQQVASGKSSD 794
Query: 159 --KTTAGGTSSVG 169
+T GG+ S G
Sbjct: 795 GTQTVDGGSFSDG 807
>M.Javanica_Scaff18052g077957 on XP_813237 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1496
Score = 27.7 bits (60), Expect = 1.2, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 10/88 (11%)
Query: 109 SATNRGATTTSARPSATHARPAATPEKSSTTSKRSSATSSG-----SSTASGRSSKTTAG 163
S + A A P A + + T + +SATSS +S S + T G
Sbjct: 1372 SGEPKPAEPKPAEPKPAEPNAATSSAREGTADQPASATSSDEHEALASVTSSSVAITDVG 1431
Query: 164 GTSS-----VGTQGTSSQSSPSPLNFDL 186
+SS VGT+G + + P F +
Sbjct: 1432 ASSSDDAQTVGTEGGAVMQADQPTQFSV 1459
>M.Javanica_Scaff18052g077957 on XP_810286 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 846
Score = 27.3 bits (59), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 62/157 (39%), Gaps = 30/157 (19%)
Query: 27 LNVPFNASTEKIKANYRELMMKYHPDKNKNNPKAKEIAQRLNGAYKILTDEQERTKYDKG 86
L++P TE +K E + + P+ E L G Q+RT+ D
Sbjct: 628 LSIPKAEGTETVKGTPPEAIKQATPEA--------ETPSSLVG--------QQRTEQD-- 669
Query: 87 LHTSSGSSHTTSGGSSTTSAGSSATNRGATTTSARPSATHARPAATPEKSSTTSKRSSAT 146
S S G +TSA SS TN A S PSA+ +PE S SS
Sbjct: 670 ---SLKKSDDAGSGGLSTSAVSSVTNSPAAKESEDPSAS----GTSPEGHSNVDVDSS-- 720
Query: 147 SSGSSTASGRSSKTTAG-GTS--SVGTQGTSSQSSPS 180
S G T + T G GT SVGT + ++P+
Sbjct: 721 SEGVQTVDAEAGDTVQGDGTQQPSVGTSAAADTNAPT 757
>M.Javanica_Scaff18052g077957 on ABR92024 MSA-1 (Invasion) [Babesia bovis]
Length = 330
Score = 26.9 bits (58), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Query: 31 FNASTEKIKANYREL--MMKYHPDKNKNNPKAKEIAQRLNGAYK--ILTDEQE 79
FNA E IKA YR + M KY NN A+E ++ +K + DE E
Sbjct: 121 FNAIFESIKAMYRRIDHMDKYLKTLRWNNDIAEEDREKAEDYFKKHVYKDEHE 173
>M.Javanica_Scaff18052g077957 on XP_001348165 RESA (Others) [plasmodium falciparum]
Length = 1085
Score = 26.6 bits (57), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 8/75 (10%)
Query: 18 ESTPT-------HYETLNVPFNASTEKIKANYRELMMKYHPDKNKNNPKAKEIAQRLNGA 70
E+ PT +Y+ L V NA +I Y +L Y+P ++ +++N A
Sbjct: 512 EAAPTIEIPDTLYYDILGVGVNADMNEITERYFKLAENYYP-YQRSGSTVFHNFRKVNEA 570
Query: 71 YKILTDEQERTKYDK 85
Y++L D ++ Y+K
Sbjct: 571 YQVLGDIDKKRWYNK 585
>M.Javanica_Scaff18052g077957 on XP_810391 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 885
Score = 26.6 bits (57), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 102 STTSAGSSATNRGATTTSARPSA-THARPAATPEKSSTTSKRSSATSSGSSTASGRSSKT 160
S +AG T++ S+ PS + PAA+ + ++ +A S T+SG +S T
Sbjct: 725 SPATAGPQQTDQTTLNASSVPSGGALSEPAASRSEEPEPAREGTADQPASVTSSGAAS-T 783
Query: 161 TAGGTSS-----VGTQGTSSQSSPSPLNFDL 186
G +SS VGT+G + + P F +
Sbjct: 784 DVGASSSDDAQTVGTEGGAMMQADQPTQFSV 814
>M.Javanica_Scaff18052g077957 on XP_816389 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 920
Score = 25.8 bits (55), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 4/81 (4%)
Query: 87 LHTSSGSSHTTSGGSSTTSAGSSATNRGATTTSARPSATHARPAATPEKSSTTSKRSS-- 144
L TSSG S SS + G T RP T A AT ++ T++
Sbjct: 783 LRTSSGGSENVDVVSSPDGDPTVGAEAGDTVPGDRPPQTSAGTPATAGANAPTAETEGQF 842
Query: 145 --ATSSGSSTASGRSSKTTAG 163
A ++G S +SG S +T G
Sbjct: 843 DPAVTTGVSVSSGESGETVGG 863
>M.Javanica_Scaff18052g077957 on XP_808957 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1446
Score = 25.8 bits (55), Expect = 4.8, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 11/80 (13%)
Query: 109 SATNRGATTTSARPSAT--HARPAATPEKSSTTSKRSSATSSGSSTASGRSSKTTAGGTS 166
SA + A SA +AT AR A + +S TS +S+T G+S++
Sbjct: 1339 SAEPKPAEPKSAELNATTPSAREGAADQSASVTSSGASSTDVGASSSD---------DAQ 1389
Query: 167 SVGTQGTSSQSSPSPLNFDL 186
+VG +G + P+ F +
Sbjct: 1390 TVGMEGGDMMQADQPVQFSV 1409
>M.Javanica_Scaff18052g077957 on ABA06449 MSA-2a/b T-2 (Invasion) [Babesia bovis]
Length = 274
Score = 25.4 bits (54), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 57/136 (41%), Gaps = 21/136 (15%)
Query: 12 IFLEIVESTPTHYETLNVPFNA----STEKIKANYRELMMKYHPDK-NKNNPKAKEIAQR 66
+F ++E P L + FNA + ++I AN M KY+ + +K + K K+
Sbjct: 111 VFKSLLERVPLIKSKL-IAFNAFLHDNPQRIMANQDGEMTKYYKEHISKEDVKVKDYTFL 169
Query: 67 LNGAYKILTDEQERTKYDKGLH-----TSSGSSHTTSGGSSTTSAGSSATNRGATTTSAR 121
+ L DE K K L +S +H+ S S+ +G TTT +
Sbjct: 170 VKFCNDFLDDESPFMKMYKALKEYDELVNSAPAHSPSPTHSSP--------QGTTTT--Q 219
Query: 122 PSATHARPAATPEKSS 137
PS A P + E SS
Sbjct: 220 PSQDSAAPNTSAESSS 235
>M.Javanica_Scaff18052g077957 on XP_808062 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 825
Score = 25.8 bits (55), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 13/79 (16%)
Query: 27 LNVPFNASTEKIKANYRELMMKYHPDKNKNNPKAKEIAQRLNG-AYKILTDEQE--RTKY 83
L +P N +T K + ++K+ P+K ++ R++ + ++ D++E +Y
Sbjct: 605 LAIPGNRATSKRVDD----IVKWEPNKTY------QVVLRMDSDEWTVIVDKKEIHNAEY 654
Query: 84 DKGLHTSSGSSHTTSGGSS 102
DK L S SH GG S
Sbjct: 655 DKNLFDSHRISHFYIGGDS 673
>M.Javanica_Scaff18052g077957 on XP_813586 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1748
Score = 25.4 bits (54), Expect = 5.9, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 32/79 (40%), Gaps = 9/79 (11%)
Query: 109 SATNRGATTTSARPSATHARPA---------ATPEKSSTTSKRSSATSSGSSTASGRSSK 159
SA + A A P +PA A P ++++++ +A S+T+S
Sbjct: 1609 SAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPNAATSSAREGTADQPASATSSDEHEA 1668
Query: 160 TTAGGTSSVGTQGTSSQSS 178
+ +SSV + SS
Sbjct: 1669 LASVTSSSVAITDVGASSS 1687
>M.Javanica_Scaff18052g077957 on XP_817333 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1037
Score = 25.4 bits (54), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 76 DEQERTKYDKGLHTSSGSSHTTSGGSS 102
DE ++TKYD+ L S SH GG S
Sbjct: 644 DEIQKTKYDEKLFNSRRISHFYIGGDS 670
>M.Javanica_Scaff18052g077957 on XP_817877 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 900
Score = 25.4 bits (54), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 11/80 (13%)
Query: 103 TTSAGSSATNRGATTTSARPSATHARPAATPEKSSTTSKRSSATSSGSSTASGRSS---- 158
T S+ S T +A+ + T + PA T RSS SG ++AS S+
Sbjct: 742 TVSSASVVTPTPPVVATAQITETPSTPAGTHLTEQGQPMRSSGADSGGASASAVSTVSIP 801
Query: 159 -------KTTAGGTSSVGTQ 171
K A GTSS GTQ
Sbjct: 802 SAENDSVKKVASGTSSDGTQ 821
>M.Javanica_Scaff18052g077957 on XP_807593 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 715
Score = 25.4 bits (54), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 46 MMKYHPDKNKNNPKAKEIAQRLNGAYKILT------DEQERTKYDKGLHTSSGSSHTTSG 99
++ Y+ N + ++Q L G IL ++++ ++YD G H++S SS G
Sbjct: 630 VLLYNRQLNAEEIRTLFLSQDLIGTEGILDSSDDDGEDKDSSEYDDGAHSNSSSSF--GG 687
Query: 100 GSSTTSAG 107
+S+ SAG
Sbjct: 688 DASSVSAG 695
>M.Javanica_Scaff18052g077957 on ABA06443 MSA-2a/b (Invasion) [Babesia bovis]
Length = 270
Score = 24.6 bits (52), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 6/46 (13%)
Query: 91 SGSSHTTSGGSSTT--SAGSSATNRGATTTSARPSATHARPAATPE 134
S +H++S G++TT S S+A N A + +PS +PA TP+
Sbjct: 205 SSPTHSSSQGTTTTRPSQDSAAPNTSAGNLNGQPS----KPAETPK 246
>M.Javanica_Scaff18052g077957 on XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3119
Score = 25.0 bits (53), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 6/53 (11%)
Query: 82 KYDKGLHTSSGSSHTTSGGSS-TTSAGSSAT-----NRGATTTSARPSATHAR 128
KY TS TTSGGS TT+AGSS T N GA R + +
Sbjct: 1890 KYGPKAPTSWKCVPTTSGGSGVTTTAGSSVTTTPPSNSGAICVPPRRRRLYVK 1942
>M.Javanica_Scaff18052g077957 on XP_821388 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 907
Score = 25.0 bits (53), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 14/77 (18%)
Query: 90 SSGSSHTTSGGSSTTSAGSSATNRGATTTSARPSATHARPAATPEKSSTTSKRSSATSSG 149
S GSS+ SGG+STT+ + T PSA + + +S TS + T G
Sbjct: 785 SMGSSNAGSGGASTTAVSAITT----------PSAGEE---SVLQVTSGTSPEGTQTVGG 831
Query: 150 SSTASGRSS-KTTAGGT 165
STA G + +T GGT
Sbjct: 832 GSTADGEPTMETREGGT 848
>M.Javanica_Scaff18052g077957 on XP_001351079 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2203
Score = 25.0 bits (53), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 26/35 (74%)
Query: 86 GLHTSSGSSHTTSGGSSTTSAGSSATNRGATTTSA 120
G +T++ ++TT+ G++TT++G++ T G TT++
Sbjct: 1869 GKNTTASGNNTTASGNNTTASGNNTTASGKNTTAS 1903
>M.Javanica_Scaff18052g077957 on XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2238
Score = 25.0 bits (53), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 10/64 (15%)
Query: 86 GLHTSSGSSHTTSGGSSTTSAGSSATNRGATTTSAR----------PSATHARPAATPEK 135
G +T++ ++TT+ G++TT++G++ T G TT++ PS T P+ P+
Sbjct: 1859 GNNTTASGNNTTASGNNTTASGNNTTASGNNTTASDTQNDIQNDGIPSDTPNTPSDIPKT 1918
Query: 136 SSTT 139
S T
Sbjct: 1919 PSDT 1922
>M.Javanica_Scaff18052g077957 on ABA06447 MSA-2a/b (Invasion) [Babesia bovis]
Length = 270
Score = 24.6 bits (52), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 6/46 (13%)
Query: 91 SGSSHTTSGGSSTT--SAGSSATNRGATTTSARPSATHARPAATPE 134
S +H++S G++TT S S+A N A + +PS +PA TP+
Sbjct: 205 SSPTHSSSQGTTTTRPSQDSAAPNTSAGNLNGQPS----KPAETPK 246
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1826g018653
(260 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_844691 VSG (Establishment) [Trypanosoma brucei] 26 2.0
XP_816459 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.1
XP_827750 VSG (Establishment) [Trypanosoma brucei] 25 3.8
XP_827747 VSG (Establishment) [Trypanosoma brucei] 25 4.8
>M.Javanica_Scaff1826g018653 on XP_844691 VSG (Establishment) [Trypanosoma brucei]
Length = 504
Score = 26.2 bits (56), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 94 FIRIFETIKESKQLLFKYNENEED--FTKLATDKE 126
F IF+T +S+Q+ K N+ ED T LAT E
Sbjct: 371 FKEIFDTPLDSRQITVKLNDKSEDKALTALATASE 405
>M.Javanica_Scaff1826g018653 on XP_816459 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 904
Score = 26.2 bits (56), Expect = 2.1, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 27/49 (55%)
Query: 81 KNKDEKQLMLRQLFIRIFETIKESKQLLFKYNENEEDFTKLATDKESRE 129
K DEK+ + + + E +K K++L +NE ++ +KL + ++E
Sbjct: 449 KKGDEKETSPGMVSVILTEQLKRVKEVLKTWNEVDKRVSKLCASENAKE 497
>M.Javanica_Scaff1826g018653 on XP_827750 VSG (Establishment) [Trypanosoma brucei]
Length = 526
Score = 25.4 bits (54), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 16/83 (19%)
Query: 63 LLKIKKREQEAALRTILTKNKDEKQLMLRQLFIRIFETIKESKQLLFKYNENEEDFTKLA 122
LL + EAAL+ ++TK+KD+ + I + K + Q Y E+ + + KLA
Sbjct: 64 LLAVNLSMSEAALQQLVTKHKDKS-------WDDIPASDKPAAQ---PYKEHWQHWQKLA 113
Query: 123 TDKESR------EHFARIIENTI 139
D + E F ++ +NT+
Sbjct: 114 ADPKPETVKFKLEQFRKVSQNTM 136
>M.Javanica_Scaff1826g018653 on XP_827747 VSG (Establishment) [Trypanosoma brucei]
Length = 509
Score = 25.0 bits (53), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 168 WSNNFCANLTFLDLETKELLNLAAQEIEIIPKSENF 203
W N A++T L LLN AA ++ +P N
Sbjct: 172 WETNHKAHVTGLKAAVTTLLNKAAYNVDPVPAQSNH 207
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff22027g085447
(278 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_827749 VSG (Establishment) [Trypanosoma brucei] 27 0.95
>M.Javanica_Scaff22027g085447 on XP_827749 VSG (Establishment) [Trypanosoma brucei]
Length = 516
Score = 27.3 bits (59), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 46 KSPGYPNEYCGSLDCKW 62
K G E C S+DCKW
Sbjct: 460 KCAGKQQEDCKSMDCKW 476
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff22864g086859
(399 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609315 variant erythrocyte surface antigen-1, alpha subun... 29 0.42
AAO83837 SUB2 (Protease) [Toxoplasma gondii] 28 0.75
XP_001609754 variant erythrocyte surface antigen-1, alpha subun... 27 2.0
XP_001609666 variant erythrocyte surface antigen-1, alpha subun... 27 2.6
XP_001611366 variant erythrocyte surface antigen-1, beta subuni... 26 4.4
XP_001609040 variant erythrocyte surface antigen-1, alpha subun... 25 7.5
>M.Javanica_Scaff22864g086859 on XP_001609315 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1338
Score = 29.3 bits (64), Expect = 0.42, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 239 IQKQKKFKNTSKRISQKIHKILKNMIERMEKKIGKENGTRNQTSSQKEEPPTEEHD--DF 296
I+K++ + N +IS IHK+L+ + ++ K+ K+ + + EP + + F
Sbjct: 778 IEKERDYSNAKDKISAAIHKVLE--VLKILTKLAKQYEEELKDKMKGNEPTNNKIELISF 835
Query: 297 DKEMSELKKLKDGKLTI 313
KE+ E + D I
Sbjct: 836 IKELKEFLNIIDDMFDI 852
>M.Javanica_Scaff22864g086859 on AAO83837 SUB2 (Protease) [Toxoplasma gondii]
Length = 255
Score = 28.1 bits (61), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 287 EPPTEEHDDFDKEMSEL-KKLKDGKLTIDKKLKLEIHEKKEAIEKKMIGILNGYKTVEEK 345
+PP +EH D D E + L K+ + ++++ K++AI K N +K ++E
Sbjct: 167 QPPRDEHQDTDVEQAPLIKEDESDSPSVEEPRAQPPENKEDAITKPRDADWNPWKFLDEN 226
Query: 346 KAQIGKWKVILDDWE 360
I + DDW+
Sbjct: 227 PLPIYR-----DDWD 236
>M.Javanica_Scaff22864g086859 on XP_001609754 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1295
Score = 27.3 bits (59), Expect = 2.0, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 18/95 (18%)
Query: 215 GSNAFTKDSILNFEKIPEKEYKYEIQKQKK-FKNTSKRISQKIHKILKNMIERMEKKIGK 273
GS A D+++N ++ E+QK KK + + RIS+ I+K+ ++++ +EK + +
Sbjct: 744 GSGAL--DTLVNGGTGSLQQVGSELQKWKKDYSSAKDRISEVINKV-RDVLTVLEKGLPQ 800
Query: 274 ENGTRNQTSSQKEEPPTEEHDDFDKEMSELKKLKD 308
NG N D+F K +KKL+D
Sbjct: 801 VNGQLNG-----------HKDEFTK---AIKKLED 821
>M.Javanica_Scaff22864g086859 on XP_001609666 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1269
Score = 26.9 bits (58), Expect = 2.6, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 39/81 (48%)
Query: 250 KRISQKIHKILKNMIERMEKKIGKENGTRNQTSSQKEEPPTEEHDDFDKEMSELKKLKDG 309
K+I K+ + E+++ + K Q + +E T++ D +K L+K K+G
Sbjct: 593 KKILWKVPSGKDTLAEKLKDVLEKIGEVVVQLGNAQEALETKDKDVIEKVKEALRKAKEG 652
Query: 310 KLTIDKKLKLEIHEKKEAIEK 330
T LK ++ E K+ +++
Sbjct: 653 LETAKNGLKDKLEEAKKKLDE 673
>M.Javanica_Scaff22864g086859 on XP_001611366 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1173
Score = 26.2 bits (56), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 203 LSTHVLLEAIYKGSNAFTKDSILNFEKIPEKEYKYEIQKQKKFKNTSKRISQ-KIHKILK 261
L H+L ++ +A K+ IL + P+KE +K + + +S + K
Sbjct: 362 LVLHILASGYFRAGSAGAKNVILAPKAAPKKEETPSPRKPRTIREILYWLSALPYSQGYK 421
Query: 262 NMIERMEKK 270
+++RM+ K
Sbjct: 422 ELVDRMQDK 430
>M.Javanica_Scaff22864g086859 on XP_001609040 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1335
Score = 25.4 bits (54), Expect = 7.5, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 242 QKKFKNTSKRISQKI---HKILKNMIERMEKKIGKENGTRNQT 281
+K + + RIS+ I HK+L+ + E +EK+I +E +T
Sbjct: 762 RKDYSSAKDRISEAIDGLHKVLEILKEGVEKQIKEEAKEAKKT 804
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff24297g089126
(264 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_821294 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 5.8
>M.Javanica_Scaff24297g089126 on XP_821294 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 776
Score = 25.0 bits (53), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 23/53 (43%)
Query: 89 SSNFGDTESVDEKVGEDAGSKRKRKGMKEKNDFGGKNQNRRNEDSEGLNEQNK 141
S NF DT DE +G DA K+ G+ G K Q E G QN+
Sbjct: 515 SGNFSDTTWRDEYLGVDATVKKGTNGVATGYADGVKFQGAWAEWPVGRQGQNQ 567
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff16910g075589
(529 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1776g018270
(54 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609533 variant erythrocyte surface antigen-1, alpha subun... 24 0.46
XP_001611900 variant erythrocyte surface antigen-1, alpha subun... 24 0.46
XP_001610714 variant erythrocyte surface antigen-1, alpha subun... 24 0.46
XP_001611206 variant erythrocyte surface antigen-1, alpha subun... 24 0.46
XP_001610713 variant erythrocyte surface antigen-1, alpha subun... 24 0.46
XP_001609751 variant erythrocyte surface antigen-1, alpha subun... 24 0.46
XP_001610567 variant erythrocyte surface antigen-1, alpha subun... 24 0.46
XP_001609935 variant erythrocyte surface antigen-1, alpha subun... 24 0.46
XP_001610196 variant erythrocyte surface antigen-1, alpha subun... 24 0.46
XP_001609040 variant erythrocyte surface antigen-1, alpha subun... 24 0.46
XP_001609540 variant erythrocyte surface antigen-1, alpha subun... 24 0.46
XP_001609101 variant erythrocyte surface antigen-1, alpha subun... 24 0.46
XP_001609163 variant erythrocyte surface antigen-1, alpha subun... 24 0.46
XP_001609754 variant erythrocyte surface antigen-1, alpha subun... 24 0.53
XP_001608795 variant erythrocyte surface antigen-1, alpha subun... 24 0.53
XP_001608665 variant erythrocyte surface antigen-1, alpha subun... 24 0.53
XP_001611736 variant erythrocyte surface antigen-1, alpha subun... 24 0.53
XP_001609666 variant erythrocyte surface antigen-1, alpha subun... 23 0.65
XP_001610497 variant erythrocyte surface antigen-1, alpha subun... 23 0.65
XP_001609618 variant erythrocyte surface antigen-1, alpha subun... 23 0.65
XP_001610721 variant erythrocyte surface antigen-1, alpha subun... 23 0.65
XP_001608785 variant erythrocyte surface antigen-1, alpha subun... 23 1.2
XP_001611901 variant erythrocyte surface antigen-1, alpha subun... 23 1.2
XP_001609033 variant erythrocyte surface antigen-1, alpha subun... 23 1.2
XP_001609667 variant erythrocyte surface antigen-1, alpha subun... 23 1.2
XP_001611147 variant erythrocyte surface antigen-1, alpha subun... 23 1.2
XP_001612314 variant erythrocyte surface antigen-1, alpha subun... 23 1.2
XP_001609034 variant erythrocyte surface antigen-1, alpha subun... 23 1.2
XP_001609041 variant erythrocyte surface antigen-1, alpha subun... 23 1.2
XP_001609315 variant erythrocyte surface antigen-1, alpha subun... 23 1.2
XP_001609565 variant erythrocyte surface antigen-1, alpha subun... 23 1.2
XP_001611442 variant erythrocyte surface antigen-1, alpha subun... 23 1.2
XP_001611897 variant erythrocyte surface antigen-1, alpha subun... 23 1.2
XP_001609450 variant erythrocyte surface antigen-1, alpha subun... 23 1.2
XP_001608670 variant erythrocyte surface antigen-1, alpha subun... 23 1.5
XP_001609167 variant erythrocyte surface antigen-1, alpha subun... 22 1.8
XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum] 22 2.5
XP_001349036 PfEMP1 (Establishment) [Plasmodium falciparum] 22 4.4
>M.Javanica_Scaff1776g018270 on XP_001609533 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1162
Score = 24.3 bits (51), Expect = 0.46, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 5/31 (16%)
Query: 9 LIYLIIFLKIQCAAKLIHVEVKIKDDWKEKR 39
L Y + FL+ QCA V+V + W+E R
Sbjct: 560 LFYQLYFLRKQCA-----VKVALGGKWRECR 585
>M.Javanica_Scaff1776g018270 on XP_001611900 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1226
Score = 24.3 bits (51), Expect = 0.46, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 5/31 (16%)
Query: 9 LIYLIIFLKIQCAAKLIHVEVKIKDDWKEKR 39
L Y + FL+ QCA V+V + W+E R
Sbjct: 608 LFYQLYFLRKQCA-----VKVALGGKWRECR 633
>M.Javanica_Scaff1776g018270 on XP_001610714 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1231
Score = 24.3 bits (51), Expect = 0.46, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 5/31 (16%)
Query: 9 LIYLIIFLKIQCAAKLIHVEVKIKDDWKEKR 39
L Y + FL+ QCA V+V + W+E R
Sbjct: 524 LFYQLYFLRKQCA-----VKVALGGKWRECR 549
>M.Javanica_Scaff1776g018270 on XP_001611206 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1285
Score = 24.3 bits (51), Expect = 0.46, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 5/31 (16%)
Query: 9 LIYLIIFLKIQCAAKLIHVEVKIKDDWKEKR 39
L Y + FL+ QCA V+V + W+E R
Sbjct: 570 LFYQLYFLRKQCA-----VKVALGGKWRECR 595
>M.Javanica_Scaff1776g018270 on XP_001610713 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1294
Score = 24.3 bits (51), Expect = 0.46, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 5/31 (16%)
Query: 9 LIYLIIFLKIQCAAKLIHVEVKIKDDWKEKR 39
L Y + FL+ QCA V+V + W+E R
Sbjct: 567 LFYQLYFLRKQCA-----VKVALGGKWRECR 592
>M.Javanica_Scaff1776g018270 on XP_001609751 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1298
Score = 24.3 bits (51), Expect = 0.46, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 5/31 (16%)
Query: 9 LIYLIIFLKIQCAAKLIHVEVKIKDDWKEKR 39
L Y + FL+ QCA V+V + W+E R
Sbjct: 558 LFYQLYFLRKQCA-----VKVALGGKWRECR 583
>M.Javanica_Scaff1776g018270 on XP_001610567 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1315
Score = 24.3 bits (51), Expect = 0.46, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 5/31 (16%)
Query: 9 LIYLIIFLKIQCAAKLIHVEVKIKDDWKEKR 39
L Y + FL+ QCA V+V + W+E R
Sbjct: 602 LFYQLYFLRKQCA-----VKVALGGKWRECR 627
>M.Javanica_Scaff1776g018270 on XP_001609935 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1317
Score = 24.3 bits (51), Expect = 0.46, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 5/31 (16%)
Query: 9 LIYLIIFLKIQCAAKLIHVEVKIKDDWKEKR 39
L Y + FL+ QCA V+V + W+E R
Sbjct: 606 LFYQLYFLRKQCA-----VKVALGGKWRECR 631
>M.Javanica_Scaff1776g018270 on XP_001610196 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1330
Score = 24.3 bits (51), Expect = 0.46, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 5/31 (16%)
Query: 9 LIYLIIFLKIQCAAKLIHVEVKIKDDWKEKR 39
L Y + FL+ QCA V+V + W+E R
Sbjct: 614 LFYQLYFLRKQCA-----VKVALGGKWRECR 639
>M.Javanica_Scaff1776g018270 on XP_001609040 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1335
Score = 24.3 bits (51), Expect = 0.46, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 5/31 (16%)
Query: 9 LIYLIIFLKIQCAAKLIHVEVKIKDDWKEKR 39
L Y + FL+ QCA V+V + W+E R
Sbjct: 582 LFYQLYFLRKQCA-----VKVALGGKWRECR 607
>M.Javanica_Scaff1776g018270 on XP_001609540 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1349
Score = 24.3 bits (51), Expect = 0.46, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 5/31 (16%)
Query: 9 LIYLIIFLKIQCAAKLIHVEVKIKDDWKEKR 39
L Y + FL+ QCA V+V + W+E R
Sbjct: 600 LFYQLYFLRKQCA-----VKVALGGKWRECR 625
>M.Javanica_Scaff1776g018270 on XP_001609101 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1359
Score = 24.3 bits (51), Expect = 0.46, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 5/31 (16%)
Query: 9 LIYLIIFLKIQCAAKLIHVEVKIKDDWKEKR 39
L Y + FL+ QCA V+V + W+E R
Sbjct: 591 LFYQLYFLRKQCA-----VKVALGGKWRECR 616
>M.Javanica_Scaff1776g018270 on XP_001609163 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1360
Score = 24.3 bits (51), Expect = 0.46, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 5/31 (16%)
Query: 9 LIYLIIFLKIQCAAKLIHVEVKIKDDWKEKR 39
L Y + FL+ QCA V+V + W+E R
Sbjct: 591 LFYQLYFLRKQCA-----VKVALGGKWRECR 616
>M.Javanica_Scaff1776g018270 on XP_001609754 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1295
Score = 23.9 bits (50), Expect = 0.53, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 5/31 (16%)
Query: 9 LIYLIIFLKIQCAAKLIHVEVKIKDDWKEKR 39
L Y + FL+ QCA V+V + W+E R
Sbjct: 587 LFYQLYFLRKQCA-----VKVAMGGKWRECR 612
>M.Javanica_Scaff1776g018270 on XP_001608795 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1323
Score = 23.9 bits (50), Expect = 0.53, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 5/31 (16%)
Query: 9 LIYLIIFLKIQCAAKLIHVEVKIKDDWKEKR 39
L Y + FL+ QCA V+V + W+E R
Sbjct: 582 LFYQLYFLRKQCA-----VKVAMGGKWRECR 607
>M.Javanica_Scaff1776g018270 on XP_001608665 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1326
Score = 23.9 bits (50), Expect = 0.53, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 5/31 (16%)
Query: 9 LIYLIIFLKIQCAAKLIHVEVKIKDDWKEKR 39
L Y + FL+ QCA V+V + W+E R
Sbjct: 623 LFYQLYFLRKQCA-----VKVAMGGKWRECR 648
>M.Javanica_Scaff1776g018270 on XP_001611736 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1365
Score = 23.9 bits (50), Expect = 0.53, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 5/31 (16%)
Query: 9 LIYLIIFLKIQCAAKLIHVEVKIKDDWKEKR 39
L Y + FL+ QCA V+V + W+E R
Sbjct: 634 LFYQLYFLRKQCA-----VKVAMGGKWRECR 659
>M.Javanica_Scaff1776g018270 on XP_001609666 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1269
Score = 23.5 bits (49), Expect = 0.65, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 5/31 (16%)
Query: 9 LIYLIIFLKIQCAAKLIHVEVKIKDDWKEKR 39
L Y + FL+ QCA K V + W+E R
Sbjct: 535 LFYQLYFLRKQCAMK-----VALGGKWRECR 560
>M.Javanica_Scaff1776g018270 on XP_001610497 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1315
Score = 23.5 bits (49), Expect = 0.65, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 5/31 (16%)
Query: 9 LIYLIIFLKIQCAAKLIHVEVKIKDDWKEKR 39
L Y + FL+ QCA K V + W+E R
Sbjct: 590 LFYQLYFLRKQCAMK-----VALGGKWRECR 615
>M.Javanica_Scaff1776g018270 on XP_001609618 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1325
Score = 23.5 bits (49), Expect = 0.65, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 5/31 (16%)
Query: 9 LIYLIIFLKIQCAAKLIHVEVKIKDDWKEKR 39
L Y + FL+ QCA K V + W+E R
Sbjct: 600 LFYQLYFLRKQCAMK-----VALGGKWRECR 625
>M.Javanica_Scaff1776g018270 on XP_001610721 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1331
Score = 23.5 bits (49), Expect = 0.65, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 5/31 (16%)
Query: 9 LIYLIIFLKIQCAAKLIHVEVKIKDDWKEKR 39
L Y + FL+ QCA K V + W+E R
Sbjct: 605 LFYQLYFLRKQCAMK-----VALGGKWRECR 630
>M.Javanica_Scaff1776g018270 on XP_001608785 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 954
Score = 23.1 bits (48), Expect = 1.2, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 5/31 (16%)
Query: 9 LIYLIIFLKIQCAAKLIHVEVKIKDDWKEKR 39
L Y + FL+ QCA V+V W+E R
Sbjct: 589 LFYQLYFLRKQCA-----VKVTCGGKWRECR 614
>M.Javanica_Scaff1776g018270 on XP_001611901 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1211
Score = 23.1 bits (48), Expect = 1.2, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 5/31 (16%)
Query: 9 LIYLIIFLKIQCAAKLIHVEVKIKDDWKEKR 39
L Y + FL+ QCA V+V W+E R
Sbjct: 606 LFYQLYFLRKQCA-----VKVTCGGKWRECR 631
>M.Javanica_Scaff1776g018270 on XP_001609033 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1270
Score = 23.1 bits (48), Expect = 1.2, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 5/31 (16%)
Query: 9 LIYLIIFLKIQCAAKLIHVEVKIKDDWKEKR 39
L Y + FL+ QCA V+V W+E R
Sbjct: 555 LFYQLYFLRKQCA-----VKVTCGGKWRECR 580
>M.Javanica_Scaff1776g018270 on XP_001609667 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1303
Score = 23.1 bits (48), Expect = 1.2, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 5/31 (16%)
Query: 9 LIYLIIFLKIQCAAKLIHVEVKIKDDWKEKR 39
L Y + FL+ QCA V+V W+E R
Sbjct: 588 LFYQLYFLRKQCA-----VKVTCGGKWRECR 613
>M.Javanica_Scaff1776g018270 on XP_001611147 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1304
Score = 23.1 bits (48), Expect = 1.2, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 5/31 (16%)
Query: 9 LIYLIIFLKIQCAAKLIHVEVKIKDDWKEKR 39
L Y + FL+ QCA V+V W+E R
Sbjct: 582 LFYQLYFLRKQCA-----VKVTCGGKWRECR 607
>M.Javanica_Scaff1776g018270 on XP_001612314 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1308
Score = 23.1 bits (48), Expect = 1.2, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 5/31 (16%)
Query: 9 LIYLIIFLKIQCAAKLIHVEVKIKDDWKEKR 39
L Y + FL+ QCA V+V W+E R
Sbjct: 600 LFYQLYFLRKQCA-----VKVTCGGKWRECR 625
>M.Javanica_Scaff1776g018270 on XP_001609034 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1313
Score = 23.1 bits (48), Expect = 1.2, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 5/31 (16%)
Query: 9 LIYLIIFLKIQCAAKLIHVEVKIKDDWKEKR 39
L Y + FL+ QCA V+V W+E R
Sbjct: 591 LFYQLYFLRKQCA-----VKVTCGGKWRECR 616
>M.Javanica_Scaff1776g018270 on XP_001609041 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1318
Score = 23.1 bits (48), Expect = 1.2, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 5/31 (16%)
Query: 9 LIYLIIFLKIQCAAKLIHVEVKIKDDWKEKR 39
L Y + FL+ QCA V+V W+E R
Sbjct: 600 LFYQLYFLRKQCA-----VKVTCGGKWRECR 625
>M.Javanica_Scaff1776g018270 on XP_001609315 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1338
Score = 23.1 bits (48), Expect = 1.2, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 5/31 (16%)
Query: 9 LIYLIIFLKIQCAAKLIHVEVKIKDDWKEKR 39
L Y + FL+ QCA V+V W+E R
Sbjct: 609 LFYQLYFLRKQCA-----VKVTCGGKWRECR 634
>M.Javanica_Scaff1776g018270 on XP_001609565 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1341
Score = 23.1 bits (48), Expect = 1.2, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 5/31 (16%)
Query: 9 LIYLIIFLKIQCAAKLIHVEVKIKDDWKEKR 39
L Y + FL+ QCA V+V W+E R
Sbjct: 618 LFYQLYFLRKQCA-----VKVTCGGKWRECR 643
>M.Javanica_Scaff1776g018270 on XP_001611442 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1350
Score = 23.1 bits (48), Expect = 1.2, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 5/31 (16%)
Query: 9 LIYLIIFLKIQCAAKLIHVEVKIKDDWKEKR 39
L Y + FL+ QCA V+V W+E R
Sbjct: 630 LFYQLYFLRKQCA-----VKVTCGGKWRECR 655
>M.Javanica_Scaff1776g018270 on XP_001611897 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1369
Score = 23.1 bits (48), Expect = 1.2, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 8/42 (19%)
Query: 9 LIYLIIFLKIQCAAKLIHVEVKIKDDWKEKREFIYLKKFEIK 50
L Y + FL+ QCA V+V W+E R Y K E K
Sbjct: 606 LFYQLYFLRKQCA-----VKVACGGKWRECR---YGKDVESK 639
>M.Javanica_Scaff1776g018270 on XP_001609450 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1309
Score = 23.1 bits (48), Expect = 1.2, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 5/31 (16%)
Query: 9 LIYLIIFLKIQCAAKLIHVEVKIKDDWKEKR 39
L Y + FL+ QCA V+V W+E R
Sbjct: 566 LFYQLYFLRKQCA-----VKVTYGGKWRECR 591
>M.Javanica_Scaff1776g018270 on XP_001608670 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1320
Score = 22.7 bits (47), Expect = 1.5, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 5/31 (16%)
Query: 9 LIYLIIFLKIQCAAKLIHVEVKIKDDWKEKR 39
L Y + FL+ QCA V+V W+E R
Sbjct: 600 LFYQLYFLRKQCA-----VKVSSGGKWRECR 625
>M.Javanica_Scaff1776g018270 on XP_001609167 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1317
Score = 22.3 bits (46), Expect = 1.8, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 5/31 (16%)
Query: 9 LIYLIIFLKIQCAAKLIHVEVKIKDDWKEKR 39
L Y + FL+ QCA V++ W+E R
Sbjct: 593 LFYQLYFLRKQCA-----VKITCGGKWRECR 618
>M.Javanica_Scaff1776g018270 on XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1711
Score = 21.9 bits (45), Expect = 2.5, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 30 KIKDDWKEKREFIYLKKFEIKD 51
K KD+W + +EF +K +KD
Sbjct: 642 KKKDEWDKIKEFFRKQKDLLKD 663
>M.Javanica_Scaff1776g018270 on XP_001349036 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2192
Score = 21.6 bits (44), Expect = 4.4, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Query: 17 KIQCAAKLIHVEVKIKDDWKEKREFIY 43
K C K I E K KD+WK ++ Y
Sbjct: 703 KCDCFQKWI--EQKKKDEWKPIKDHFY 727
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff18090g078038
(98 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_804542 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.3
XP_827755 VSG (Establishment) [Trypanosoma brucei] 23 3.9
XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum] 23 4.3
XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum] 23 4.5
XP_001351080 PfEMP1 (Establishment) [Plasmodium falciparum] 23 5.3
>M.Javanica_Scaff18090g078038 on XP_804542 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 813
Score = 24.6 bits (52), Expect = 1.3, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 19 DSQDDERFTLDSEMAQQFIQANPDLAQFASLLANNHTYL 57
D ++DE T+DS A F++ N + FA L + Y
Sbjct: 86 DKKEDE--TVDSLYAPSFVEVNGGVFAFAEALLKDGNYF 122
>M.Javanica_Scaff18090g078038 on XP_827755 VSG (Establishment) [Trypanosoma brucei]
Length = 510
Score = 23.1 bits (48), Expect = 3.9, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 38 QANPDLAQFASLLANNHTYLELLDQLISQVDQEIESNRRMQ 78
+AN A+ A+ + H YL L Q I +I++ R+Q
Sbjct: 44 KANDPAAEAATDVCKEHAYLTRLSQHIQGKLNDIKATIRLQ 84
>M.Javanica_Scaff18090g078038 on XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3954
Score = 23.1 bits (48), Expect = 4.3, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 3 PDSYSDILPSFSVSNVDSQDDERFTLDSEMAQQFIQA 39
P + +PS N D+E TL E Q+IQ+
Sbjct: 3569 PSDTQNDIPSGDTPNNKLTDNEWNTLKDEFISQYIQS 3605
>M.Javanica_Scaff18090g078038 on XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3119
Score = 23.1 bits (48), Expect = 4.5, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 4 DSYSDILPSFSVSNVDSQDDERFTLDSEMAQQFIQANP-DLAQF 46
D SD +PS D+E L + Q+IQ+ P D+ Q+
Sbjct: 2822 DIPSDDIPSSDTPMNKFTDEEWNELKQDFVSQYIQSEPLDVPQY 2865
>M.Javanica_Scaff18090g078038 on XP_001351080 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2209
Score = 22.7 bits (47), Expect = 5.3, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 3 PDSYSDILPSFSVSNVDSQDDERFTLDSEMAQQFIQA 39
P++ SDI + S + DDE TL E Q++Q+
Sbjct: 1901 PNTPSDIPKTPSDTPPPITDDEWNTLKDEFISQYLQS 1937
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff20395g082596
(85 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_807743 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.98
XP_809726 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.0
XP_809961 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.0
XP_808550 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.3
XP_813677 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.6
XP_814555 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.5
XP_809850 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.5
XP_656181 Hgl2 (Adhesin) [Entamoeba histolytica] 22 6.4
XP_655415 Hgl (Adhesin) [Entamoeba histolytica] 22 8.9
>M.Javanica_Scaff20395g082596 on XP_807743 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 931
Score = 24.6 bits (52), Expect = 0.98, Method: Composition-based stats.
Identities = 10/17 (58%), Positives = 11/17 (64%)
Query: 3 LTYQEIHKFNPNVTLIP 19
LT +EI NPN LIP
Sbjct: 714 LTLEEIGALNPNKVLIP 730
>M.Javanica_Scaff20395g082596 on XP_809726 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 565
Score = 24.3 bits (51), Expect = 1.0, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 29 QELADTLTFIKTSIPAEEESCENNEKLPFKFPLYLF 64
+++ LTF S AE C+ K+PF F Y F
Sbjct: 514 KKVPSGLTFEGRSAGAEWPVCKQWPKMPFHFANYGF 549
>M.Javanica_Scaff20395g082596 on XP_809961 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 916
Score = 24.3 bits (51), Expect = 1.0, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 29 QELADTLTFIKTSIPAEEESCENNEKLPFKFPLYLF 64
+++ LTF S AE C+ K+PF F Y F
Sbjct: 513 KKVPSGLTFEGRSAGAEWPVCKQWPKMPFHFANYGF 548
>M.Javanica_Scaff20395g082596 on XP_808550 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 948
Score = 24.3 bits (51), Expect = 1.3, Method: Composition-based stats.
Identities = 10/17 (58%), Positives = 11/17 (64%)
Query: 3 LTYQEIHKFNPNVTLIP 19
L+ EI FNPN LIP
Sbjct: 733 LSTAEIGAFNPNKVLIP 749
>M.Javanica_Scaff20395g082596 on XP_813677 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 945
Score = 23.9 bits (50), Expect = 1.6, Method: Composition-based stats.
Identities = 10/17 (58%), Positives = 11/17 (64%)
Query: 3 LTYQEIHKFNPNVTLIP 19
L+ EI FNPN LIP
Sbjct: 730 LSTAEIGAFNPNNVLIP 746
>M.Javanica_Scaff20395g082596 on XP_814555 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 907
Score = 23.5 bits (49), Expect = 2.5, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 20/54 (37%)
Query: 3 LTYQEIHKFNPNVTLIPYQCQHGTTPQELADTLTFIKTSIPAEEESCENNEKLP 56
LT +EI NPN LI + +TP + T + A N P
Sbjct: 721 LTSEEIGVLNPNKALISPLKEEPSTPSPVPSASVVPPTPLVAATAQQTGNSSTP 774
>M.Javanica_Scaff20395g082596 on XP_809850 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 915
Score = 23.5 bits (49), Expect = 2.5, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 20/54 (37%)
Query: 3 LTYQEIHKFNPNVTLIPYQCQHGTTPQELADTLTFIKTSIPAEEESCENNEKLP 56
LT +EI NPN LI + +TP + T + A N P
Sbjct: 729 LTSEEIGVLNPNKALISPLKEEPSTPSPVPSASVVPPTPLVAATAQQTGNSSTP 782
>M.Javanica_Scaff20395g082596 on XP_656181 Hgl2 (Adhesin) [Entamoeba histolytica]
Length = 1286
Score = 22.3 bits (46), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 23/62 (37%), Gaps = 12/62 (19%)
Query: 22 CQHGTTPQELADTLTFIKTSIPAEEESCENNEKLPFKFPLYLFEKRSCCFMQSRYQDGSG 81
C+ T Q +T+ KT +EE FP + C + Q Y DGS
Sbjct: 1125 CETATCDQTTGETIYTKKTCTVSEE------------FPTITPNQGRCFYCQCSYLDGSS 1172
Query: 82 YL 83
L
Sbjct: 1173 VL 1174
>M.Javanica_Scaff20395g082596 on XP_655415 Hgl (Adhesin) [Entamoeba histolytica]
Length = 1291
Score = 21.9 bits (45), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 23/62 (37%), Gaps = 12/62 (19%)
Query: 22 CQHGTTPQELADTLTFIKTSIPAEEESCENNEKLPFKFPLYLFEKRSCCFMQSRYQDGSG 81
C+ T Q +T+ KT +EE FP + C + Q Y DGS
Sbjct: 1130 CETATCNQTTGETIYTKKTCTVSEE------------FPTITPNQGRCFYCQCSYLDGSS 1177
Query: 82 YL 83
L
Sbjct: 1178 VL 1179
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff21859g085175
(79 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff19960g081790
(70 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350413 PfEMP1 (Establishment) [Plasmodium falciparum] 25 0.55
XP_001609034 variant erythrocyte surface antigen-1, alpha subun... 22 5.7
XP_001610197 variant erythrocyte surface antigen-1, beta subuni... 22 7.5
XP_846273 VSG (Establishment) [Trypanosoma brucei] 21 9.3
>M.Javanica_Scaff19960g081790 on XP_001350413 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2860
Score = 24.6 bits (52), Expect = 0.55, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 27 LKLDCEKYCYENCSKSSLKDSVVCELVKSICK 58
LK C+K C EN K+ +KD+ C K C+
Sbjct: 1053 LKEGCKK-CMENKGKNCIKDTPECNDCKQACE 1083
>M.Javanica_Scaff19960g081790 on XP_001609034 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1313
Score = 21.9 bits (45), Expect = 5.7, Method: Composition-based stats.
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 19 NSHHCSKIL 27
N HHC+KIL
Sbjct: 273 NRHHCAKIL 281
>M.Javanica_Scaff19960g081790 on XP_001610197 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1123
Score = 21.6 bits (44), Expect = 7.5, Method: Composition-based stats.
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 19 NSHHCSKILKLDCEKYCY 36
NSH C + K+ K CY
Sbjct: 185 NSHECYQCGKVTAPKKCY 202
>M.Javanica_Scaff19960g081790 on XP_846273 VSG (Establishment) [Trypanosoma brucei]
Length = 490
Score = 21.2 bits (43), Expect = 9.3, Method: Composition-based stats.
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 57 CKIIGCCHDPPPKK 70
CK +GC HD KK
Sbjct: 410 CKNLGCDHDAENKK 423
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff22458g086183
(110 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_806774 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.2
XP_818889 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.5
XP_821904 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.9
XP_001351561 PfEMP1 (Establishment) [Plasmodium falciparum] 24 2.1
XP_001348946 PfEMP1 (Establishment) [Plasmodium falciparum] 24 2.1
XP_818862 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.1
XP_815192 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.8
XP_802791 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.1
AAX62619 TV44 (Invasion) [Trichomonas vaginalis] 22 9.6
>M.Javanica_Scaff22458g086183 on XP_806774 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 837
Score = 25.0 bits (53), Expect = 1.2, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Query: 58 SIKNAT--NKQIIYTKVNYYSPNKASRRFL 85
++KN N+ + T+++ Y+PNKAS FL
Sbjct: 711 TVKNVLLYNRPLDSTEIDAYNPNKASIPFL 740
>M.Javanica_Scaff22458g086183 on XP_818889 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 750
Score = 24.6 bits (52), Expect = 1.5, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 64 NKQIIYTKVNYYSPNKASRRFL 85
N+ + T+++ Y+PNKAS FL
Sbjct: 632 NRPLDSTEIDAYNPNKASIPFL 653
>M.Javanica_Scaff22458g086183 on XP_821904 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 851
Score = 24.3 bits (51), Expect = 1.9, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 64 NKQIIYTKVNYYSPNKASRRFL 85
N+ + T+++ Y+PNKAS FL
Sbjct: 733 NRPLDSTEIDAYNPNKASIPFL 754
>M.Javanica_Scaff22458g086183 on XP_001351561 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3553
Score = 24.3 bits (51), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 76 SPNKASRRFLAREFPIPE 93
SP+++ + L REFP PE
Sbjct: 3103 SPSESQPKRLLREFPSPE 3120
>M.Javanica_Scaff22458g086183 on XP_001348946 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3553
Score = 24.3 bits (51), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 76 SPNKASRRFLAREFPIPE 93
SP+++ + L REFP PE
Sbjct: 3103 SPSESQPKRLLREFPSPE 3120
>M.Javanica_Scaff22458g086183 on XP_818862 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 790
Score = 24.3 bits (51), Expect = 2.1, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 19 VLSKNKYKINSHVKINMEAYSQMTLAQKNIYLQSLFGYNSIKNATNKQIIYTKVN----Y 74
V +K K + + ++ +++EA T+A++ + L + GY S++ ++ N Y
Sbjct: 362 VWAKPKPEDSKNLSLHVEALITATIAERKVMLYTQRGYASVEKKERALYLWVTDNNRSFY 421
Query: 75 YSP 77
+ P
Sbjct: 422 FGP 424
>M.Javanica_Scaff22458g086183 on XP_815192 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 722
Score = 23.5 bits (49), Expect = 3.8, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 19 VLSKNKYKINSHVKINMEAYSQMTLAQKNIYLQSLFGYNSIKNATNKQIIYTKVN----Y 74
V +K+K +++ V + +EA T+ + + L GY S N + ++ N Y
Sbjct: 363 VWTKSKPEVSQDVSLRVEALITATIEGRKVMLYIQRGYASGNNKATELYLWVTDNNRSFY 422
Query: 75 YSP 77
+ P
Sbjct: 423 FGP 425
>M.Javanica_Scaff22458g086183 on XP_802791 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 140
Score = 22.7 bits (47), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 8/18 (44%), Positives = 14/18 (77%)
Query: 64 NKQIIYTKVNYYSPNKAS 81
N+ + T+++ Y+PNKAS
Sbjct: 22 NRPLDSTEIDAYNPNKAS 39
>M.Javanica_Scaff22458g086183 on AAX62619 TV44 (Invasion) [Trichomonas vaginalis]
Length = 255
Score = 22.3 bits (46), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 23 NKYKINSHVKINMEAYSQMTLAQKNIYLQSLFGYNS 58
N +I K N + + +A +++ +Q LFGY+S
Sbjct: 44 NALQITHKCKRNRLTVNDINIALESLRIQPLFGYSS 79
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff18722g079331
(137 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_965997 PfEMP1 (Establishment) [Plasmodium falciparum] 27 0.44
XP_843645 VSG (Establishment) [Trypanosoma brucei] 25 2.6
XP_001610714 variant erythrocyte surface antigen-1, alpha subun... 24 4.6
XP_828103 VSG (Establishment) [Trypanosoma brucei] 23 7.3
>M.Javanica_Scaff18722g079331 on XP_965997 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2879
Score = 26.9 bits (58), Expect = 0.44, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 14/86 (16%)
Query: 11 RLVNCSNNNNNINSAQ--HNNLRITPILVGTEKELSTFFNSFHQHPKN-------TLIKR 61
RL C N + S + N+ + + + + E + + +H N T++ R
Sbjct: 116 RLHLCDYNLEKMGSTKIKDKNVLLAEVCMAAKYEGQSLLKQYEEHKNNYPHTNICTVLAR 175
Query: 62 AL----DMLEGDD-FIGMQKRKRALD 82
+ D++ G D F+G Q+RKR L+
Sbjct: 176 SFADIGDIVRGKDLFLGHQQRKRKLE 201
>M.Javanica_Scaff18722g079331 on XP_843645 VSG (Establishment) [Trypanosoma brucei]
Length = 569
Score = 24.6 bits (52), Expect = 2.6, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 11/69 (15%)
Query: 34 PILVGTEKELSTFFNSFHQHPKNTLIKRALDMLE-------GDDFIGMQKRKRALDLMEG 86
P++ GT+ ST S Q N +IK L +++ DD +K +A ++E
Sbjct: 43 PVIHGTDGTKSTPVTSVFQTALNEVIKLNLTVIDPKMSAVLADD----KKYDKAAKILES 98
Query: 87 DGFGGGFDR 95
G FD+
Sbjct: 99 QDVKGYFDK 107
>M.Javanica_Scaff18722g079331 on XP_001610714 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1231
Score = 23.9 bits (50), Expect = 4.6, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 4/33 (12%)
Query: 60 KRALDMLEGDDFIGMQKRKRALDLMEGDGFGGG 92
K ALD +G ++K K+AL+ + +G GGG
Sbjct: 640 KGALDTAKGK----LEKAKKALEKLTTNGGGGG 668
>M.Javanica_Scaff18722g079331 on XP_828103 VSG (Establishment) [Trypanosoma brucei]
Length = 472
Score = 23.1 bits (48), Expect = 7.3, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 31/82 (37%), Gaps = 5/82 (6%)
Query: 10 CRLVNCSNNNNNINSAQHNNLRITPILVGTEKELSTFFNSFHQHPKNTLIKRALDMLEGD 69
C L +++ IN+ NL + G +L T FN+ H T + M G
Sbjct: 211 CTLTETKASSHLINTNTGGNLGGDVVFAGGLFKLGTTFNNNHADAITTASAQHATMKAGH 270
Query: 70 DFIGMQKRKRALDLMEGDGFGG 91
D K D+ EG F G
Sbjct: 271 DAYLATK-----DVSEGYAFKG 287
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff21516g084574
(124 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_803344 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.48
XP_802688 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.51
XP_655415 Hgl (Adhesin) [Entamoeba histolytica] 24 4.0
XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum] 24 4.2
>M.Javanica_Scaff21516g084574 on XP_803344 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 249
Score = 26.2 bits (56), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 5/35 (14%)
Query: 62 SESGLCLNNDD-----SENKLLLHRFFFDSVTRQC 91
SESG + +D ++ KL+LH + DS R C
Sbjct: 196 SESGSGASQEDRLALLNDAKLMLHDWNVDSTARVC 230
>M.Javanica_Scaff21516g084574 on XP_802688 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 141
Score = 25.8 bits (55), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 5/35 (14%)
Query: 62 SESGLCLNNDD-----SENKLLLHRFFFDSVTRQC 91
SESG + +D ++ KL+LH + DS R C
Sbjct: 88 SESGSGASQEDRLALLNDAKLMLHDWNVDSTARVC 122
>M.Javanica_Scaff21516g084574 on XP_655415 Hgl (Adhesin) [Entamoeba histolytica]
Length = 1291
Score = 23.9 bits (50), Expect = 4.0, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 85 DSVTRQCYEFSAQECGGNENRFKT 108
D V QC + +C GN++ FK+
Sbjct: 842 DCVNEQCIPRTYVDCLGNDDNFKS 865
>M.Javanica_Scaff21516g084574 on XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2858
Score = 23.9 bits (50), Expect = 4.2, Method: Composition-based stats.
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 99 CGGNENRFKTAKECMEIC 116
C NEN+ K+C+E C
Sbjct: 588 CINNENQLPCIKDCLENC 605
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff23938g088565
(137 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_817389 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.0
XP_813429 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.1
XP_807802 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.2
XP_001350595 PfEMP1 (Establishment) [Plasmodium falciparum] 23 8.8
>M.Javanica_Scaff23938g088565 on XP_817389 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 792
Score = 24.3 bits (51), Expect = 3.0, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 9 QQPGEQHQQQQHSFDDPSASQHQISPNQIEPS 40
QQP E+ + Q+++ SAS Q+ N+ + S
Sbjct: 717 QQPPEERETQENTTVGESASTQQVPANRSQGS 748
>M.Javanica_Scaff23938g088565 on XP_813429 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 818
Score = 23.9 bits (50), Expect = 5.1, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 68 NSLHQNSSAESTPGGIRQFGQQ 89
N+L Q + + STPGG + GQ+
Sbjct: 723 NTLVQGTVSPSTPGGQKPTGQE 744
>M.Javanica_Scaff23938g088565 on XP_807802 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 805
Score = 23.9 bits (50), Expect = 5.2, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 68 NSLHQNSSAESTPGGIRQFGQQ 89
N+L Q + + STPGG + GQ+
Sbjct: 710 NTLVQGTVSPSTPGGQKPTGQE 731
>M.Javanica_Scaff23938g088565 on XP_001350595 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2256
Score = 23.1 bits (48), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 11/21 (52%)
Query: 5 EWKEQQPGEQHQQQQHSFDDP 25
EWK Q GE + Q DDP
Sbjct: 576 EWKCYQIGELTKDGQEGMDDP 596
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1725g017862
(1180 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAC72001 Hsp70 (Heat shock protein) [Toxoplasma gondii] 365 e-119
AAC72002 Hsp70 (Heat shock protein) [Toxoplasma gondii] 365 e-119
AAF75871 Hsp70 (Heat shock protein) [Cryptosporidium parvum] 347 e-112
CAA87086 Hsp70 (Heat shock protein) [Eimeria tenella] 229 3e-69
AAO72428 SAG3 (Adhesin) [Toxoplasma gondii] 31 0.36
XP_827084 VSG (Establishment) [Trypanosoma brucei] 28 4.0
XP_001610714 variant erythrocyte surface antigen-1, alpha subun... 27 7.7
XP_001349035 PfEMP1 (Establishment) [Plasmodium falciparum] 27 8.5
XP_807986 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 9.5
>M.Javanica_Scaff1725g017862 on AAC72001 Hsp70 (Heat shock protein) [Toxoplasma gondii]
Length = 255
Score = 365 bits (938), Expect = e-119, Method: Compositional matrix adjust.
Identities = 182/250 (72%), Positives = 211/250 (84%), Gaps = 4/250 (1%)
Query: 47 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTENGERLIGDAAKNQLTLNPEN 106
+GIDLGTTYSCVGV+KN VEIIANDQGNR TPSYVAFT+ ERL+GDAAKNQ+ NPEN
Sbjct: 7 VGIDLGTTYSCVGVWKNDAVEIIANDQGNRTTPSYVAFTDT-ERLVGDAAKNQVARNPEN 65
Query: 107 TIFDAKRLIGREYTDKTVQDDMKLWPFGV-ADKSNKPHIKANVNGEIKQFAPEEISAMVL 165
TIFDAKRLIGR++ D +VQ DMK WPF V A +KP I+ GE K F PEE+SAMVL
Sbjct: 66 TIFDAKRLIGRKFDDPSVQSDMKHWPFKVIAGPGDKPLIEVTYQGEKKTFHPEEVSAMVL 125
Query: 166 GKMKEIAEAYLGHEVTHAVVTVPAYFNDAQRQATKDAGTISGLNVVRIINEPTAAAIAYG 225
GKMKEIAEAYLG EV AV+TVPAYFND+QRQATKDAGTI+GL+V+RIINEPTAAAIAYG
Sbjct: 126 GKMKEIAEAYLGKEVKEAVITVPAYFNDSQRQATKDAGTIAGLSVLRIINEPTAAAIAYG 185
Query: 226 LDKK-EGERNILVFDLGGGTFDVSLLTIDNGVFEVLATNGDTHLGGEDFDQRTMEYFIKL 284
LDKK GE N+L+FD+GGGTFDVSLLTI++G+FEV AT GDTHLGGEDFD R +++ ++
Sbjct: 186 LDKKGCGEMNVLIFDMGGGTFDVSLLTIEDGIFEVKATAGDTHLGGEDFDNRLVDFCVQD 245
Query: 285 IKKKT-GKDL 293
K+K GKD+
Sbjct: 246 FKRKNRGKDI 255
Score = 90.1 bits (222), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 90/172 (52%), Gaps = 38/172 (22%)
Query: 701 DDSVEEDKKA------ADKENKPDIKANVKEEIKQFAPEEISAAA------IAYGLDKKK 748
D SV+ D K A +KP I+ + E K F PEE+SA IA K+
Sbjct: 80 DPSVQSDMKHWPFKVIAGPGDKPLIEVTYQGEKKTFHPEEVSAMVLGKMKEIAEAYLGKE 139
Query: 749 VKEEI-----------KQFAPE--------------EISAAAIAYGLDKKK-GKRNILVF 782
VKE + +Q + E +AAAIAYGLDKK G+ N+L+F
Sbjct: 140 VKEAVITVPAYFNDSQRQATKDAGTIAGLSVLRIINEPTAAAIAYGLDKKGCGEMNVLIF 199
Query: 783 NLGGGTLDVSLLTFDNGVSKVLARNGDTRLGDEDFDQRTMEYFIKLIKNKTR 834
++GGGT DVSLLT ++G+ +V A GDT LG EDFD R +++ ++ K K R
Sbjct: 200 DMGGGTFDVSLLTIEDGIFEVKATAGDTHLGGEDFDNRLVDFCVQDFKRKNR 251
>M.Javanica_Scaff1725g017862 on AAC72002 Hsp70 (Heat shock protein) [Toxoplasma gondii]
Length = 255
Score = 365 bits (938), Expect = e-119, Method: Compositional matrix adjust.
Identities = 182/250 (72%), Positives = 211/250 (84%), Gaps = 4/250 (1%)
Query: 47 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTENGERLIGDAAKNQLTLNPEN 106
+GIDLGTTYSCVGV+KN VEIIANDQGNR TPSYVAFT+ ERL+GDAAKNQ+ NPEN
Sbjct: 7 VGIDLGTTYSCVGVWKNDAVEIIANDQGNRTTPSYVAFTDT-ERLVGDAAKNQVARNPEN 65
Query: 107 TIFDAKRLIGREYTDKTVQDDMKLWPFGV-ADKSNKPHIKANVNGEIKQFAPEEISAMVL 165
TIFDAKRLIGR++ D +VQ DMK WPF V A +KP I+ GE K F PEE+SAMVL
Sbjct: 66 TIFDAKRLIGRKFDDPSVQSDMKHWPFKVIAGPGDKPLIEVTYQGEKKTFHPEEVSAMVL 125
Query: 166 GKMKEIAEAYLGHEVTHAVVTVPAYFNDAQRQATKDAGTISGLNVVRIINEPTAAAIAYG 225
GKMKEIAEAYLG EV AV+TVPAYFND+QRQATKDAGTI+GL+V+RIINEPTAAAIAYG
Sbjct: 126 GKMKEIAEAYLGKEVKEAVITVPAYFNDSQRQATKDAGTIAGLSVLRIINEPTAAAIAYG 185
Query: 226 LDKK-EGERNILVFDLGGGTFDVSLLTIDNGVFEVLATNGDTHLGGEDFDQRTMEYFIKL 284
LDKK GE N+L+FD+GGGTFDVSLLTI++G+FEV AT GDTHLGGEDFD R +++ ++
Sbjct: 186 LDKKGCGEMNVLIFDMGGGTFDVSLLTIEDGIFEVKATAGDTHLGGEDFDNRLVDFCVQD 245
Query: 285 IKKKT-GKDL 293
K+K GKD+
Sbjct: 246 FKRKNRGKDI 255
Score = 90.1 bits (222), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 90/172 (52%), Gaps = 38/172 (22%)
Query: 701 DDSVEEDKKA------ADKENKPDIKANVKEEIKQFAPEEISAAA------IAYGLDKKK 748
D SV+ D K A +KP I+ + E K F PEE+SA IA K+
Sbjct: 80 DPSVQSDMKHWPFKVIAGPGDKPLIEVTYQGEKKTFHPEEVSAMVLGKMKEIAEAYLGKE 139
Query: 749 VKEEI-----------KQFAPE--------------EISAAAIAYGLDKKK-GKRNILVF 782
VKE + +Q + E +AAAIAYGLDKK G+ N+L+F
Sbjct: 140 VKEAVITVPAYFNDSQRQATKDAGTIAGLSVLRIINEPTAAAIAYGLDKKGCGEMNVLIF 199
Query: 783 NLGGGTLDVSLLTFDNGVSKVLARNGDTRLGDEDFDQRTMEYFIKLIKNKTR 834
++GGGT DVSLLT ++G+ +V A GDT LG EDFD R +++ ++ K K R
Sbjct: 200 DMGGGTFDVSLLTIEDGIFEVKATAGDTHLGGEDFDNRLVDFCVQDFKRKNR 251
>M.Javanica_Scaff1725g017862 on AAF75871 Hsp70 (Heat shock protein) [Cryptosporidium parvum]
Length = 255
Score = 347 bits (889), Expect = e-112, Method: Compositional matrix adjust.
Identities = 175/256 (68%), Positives = 207/256 (80%), Gaps = 4/256 (1%)
Query: 63 NGRVEIIANDQGNRITPSYVAFTENGERLIGDAAKNQLTLNPENTIFDAKRLIGREYTDK 122
N V+I+ NDQGNR TPSYVAFTE ERLIGDAAKNQ+ NPENT+FDAKRLIGR++ D+
Sbjct: 1 NDTVDIVPNDQGNRTTPSYVAFTET-ERLIGDAAKNQVARNPENTVFDAKRLIGRKFDDQ 59
Query: 123 TVQDDMKLWPFGVA-DKSNKPHIKANVNGEIKQFAPEEISAMVLGKMKEIAEAYLGHEVT 181
VQ DM WPF V +KP I N GE K+F EEISAMVL KMKEI+EAYLG ++
Sbjct: 60 AVQSDMTHWPFKVVRGPKDKPIISVNYLGEKKEFHAEEISAMVLQKMKEISEAYLGRQIK 119
Query: 182 HAVVTVPAYFNDAQRQATKDAGTISGLNVVRIINEPTAAAIAYGLDKK-EGERNILVFDL 240
+AVVTVPAYFND+QRQATKDAG I+GLNV+RIINEPTAAAIAYGLDKK GERN+L+FDL
Sbjct: 120 NAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKGTGERNVLIFDL 179
Query: 241 GGGTFDVSLLTIDNGVFEVLATNGDTHLGGEDFDQRTMEYFIKLIKKKT-GKDLRKDNRA 299
GGGTFDVSLLTI++G+FEV AT GDTHLGGEDFD R +E+ ++ K+K G DL + RA
Sbjct: 180 GGGTFDVSLLTIEDGIFEVKATAGDTHLGGEDFDNRLVEFCVQDFKRKNRGMDLTSNARA 239
Query: 300 VQKLRREVEKAKRALS 315
+++LR + E+AKR LS
Sbjct: 240 LRRLRTQCERAKRTLS 255
Score = 108 bits (269), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 760 EISAAAIAYGLDKK-KGKRNILVFNLGGGTLDVSLLTFDNGVSKVLARNGDTRLGDEDFD 818
E +AAAIAYGLDKK G+RN+L+F+LGGGT DVSLLT ++G+ +V A GDT LG EDFD
Sbjct: 154 EPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSLLTIEDGIFEVKATAGDTHLGGEDFD 213
Query: 819 QRTMEYFIKLIKNKTR-KDLSKDNRAVQKLRREVEKATRALS 859
R +E+ ++ K K R DL+ + RA+++LR + E+A R LS
Sbjct: 214 NRLVEFCVQDFKRKNRGMDLTSNARALRRLRTQCERAKRTLS 255
>M.Javanica_Scaff1725g017862 on CAA87086 Hsp70 (Heat shock protein) [Eimeria tenella]
Length = 255
Score = 229 bits (584), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 113/203 (55%), Positives = 149/203 (73%), Gaps = 4/203 (1%)
Query: 44 GTIIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTENGERLIGDAAKNQLTLN 103
G ++GIDLGTT SCV V + + +++ N +G R TPS VAFT++G+RL+G AK Q N
Sbjct: 57 GDVVGIDLGTTNSCVAVMEGSQPKVLENSEGMRTTPSVVAFTKDGQRLVGVVAKRQAITN 116
Query: 104 PENTIFDAKRLIGREYTDKTVQDDMKLWPFGVADKSNKPHIKANVNGEIKQFAPEEISAM 163
PENT F KRLIGR + ++ + + K+ P+ V N A V G K+++P +I A
Sbjct: 117 PENTFFSTKRLIGRSFDEEAIAKERKILPYKVIRADNG---DAWVEGWGKKYSPSQIGAF 173
Query: 164 VLGKMKEIAEAYLGHEVTHAVVTVPAYFNDAQRQATKDAGTISGLNVVRIINEPTAAAIA 223
VL KMKE AE+YLG +V AV+TVPAYFND+QRQATKDAG I+GL+V+RIINEPTAAA+A
Sbjct: 174 VLMKMKETAESYLGRDVNQAVITVPAYFNDSQRQATKDAGKIAGLDVLRIINEPTAAALA 233
Query: 224 YGLDKKEGERNILVFDLGGGTFD 246
YG++K++G R I V+DLGGGTFD
Sbjct: 234 YGMEKEDG-RTIAVYDLGGGTFD 255
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 760 EISAAAIAYGLDKKKGKRNILVFNLGGGTLD 790
E +AAA+AYG++K+ G R I V++LGGGT D
Sbjct: 226 EPTAAALAYGMEKEDG-RTIAVYDLGGGTFD 255
>M.Javanica_Scaff1725g017862 on AAO72428 SAG3 (Adhesin) [Toxoplasma gondii]
Length = 255
Score = 30.8 bits (68), Expect = 0.36, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 1064 ILHVTAEDKGTGNKNKITITN---DHNRLFEDIKRMITDAEKSLLRKF 1108
+ H+ A+DKG +NK +T+ NR + I+++ + E+S+L KF
Sbjct: 119 VCHIDAKDKGDCERNKGFLTDYIPGANRYWYKIEKVENNGEQSVLYKF 166
>M.Javanica_Scaff1725g017862 on XP_827084 VSG (Establishment) [Trypanosoma brucei]
Length = 487
Score = 27.7 bits (60), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 1090 FEDIKRMITDAEK-SLLRKFAKEDNKSR------LIAKIVATILDKIKILYDNNRLSPED 1142
F D++R D E+ + RK + E N+ +K+ DK + + + LS ED
Sbjct: 76 FSDLERATKDWEEIADDRKHSHETNEGHRKFWTGARSKLGGPEKDKYAV-WTGSALSKED 134
Query: 1143 IERMVNNAEKLADCGEDNE 1161
++ N AE+ DC +DN+
Sbjct: 135 KRKVANAAERAEDCMKDND 153
>M.Javanica_Scaff1725g017862 on XP_001610714 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1231
Score = 26.9 bits (58), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 261 ATNGDTHLGGEDFDQRTMEYFIKLIKKKTGKDLRKDNRAVQKLRREVEKAKRAL 314
T+GD ++ QR E ++L + + K+ +A+Q ++RE+EKAK AL
Sbjct: 591 GTSGDLPGALKELLQRIGEVVVQLGNAQEALE-GKEKKAIQGVKRELEKAKGAL 643
>M.Javanica_Scaff1725g017862 on XP_001349035 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2239
Score = 26.9 bits (58), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 20/98 (20%)
Query: 718 DIKANVKEEIKQFAPEEISAAAIAYGLDKKKVKEEIKQFAPEEISAAAIAYGLDKKKGKR 777
DI E I F+ + A G++++KV + IA G D+ +
Sbjct: 452 DISFKNPEGIDIFSSTKYCQACPWCGIEEQKV------------NGRWIAKG-DEDCNNK 498
Query: 778 NILVFNLGGGTLDVSLLTFDNGVSKVL------ARNGD 809
I+ FN T D+S+L+ D G +K+L RNG+
Sbjct: 499 EIIKFN-NEDTTDISILSTDRGKTKILEKLGSFCRNGE 535
>M.Javanica_Scaff1725g017862 on XP_807986 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1054
Score = 26.9 bits (58), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 527 AEDKGTGNKNKITITNDHNRLS-PEDIERMVNDAEKFAEEDKRVKETVTLRNELE 580
A D+ +G + + +++D + ++ P D E V + + + E+K V+ T T +E
Sbjct: 867 ANDRSSGTTSSVAVSSDMDTVAAPADGEHQVQQSVELSAENKNVQSTGTRTTGME 921
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff18629g079164
(58 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350936 PfEMP1 (Establishment) [Plasmodium falciparum] 26 0.12
XP_829785 VSG (Establishment) [Trypanosoma brucei] 23 1.3
XP_804817 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.3
XP_816459 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.7
XP_828096 VSG (Establishment) [Trypanosoma brucei] 22 2.3
>M.Javanica_Scaff18629g079164 on XP_001350936 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2163
Score = 25.8 bits (55), Expect = 0.12, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 28 QFSEKLEPKFPKNLGAQFSRAQFSGTPLI 56
+ EK+EP+F LG Q + + G I
Sbjct: 91 ELGEKVEPRFSDTLGGQCTNKKIEGNKYI 119
>M.Javanica_Scaff18629g079164 on XP_829785 VSG (Establishment) [Trypanosoma brucei]
Length = 484
Score = 23.1 bits (48), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 3 QNPARSAGFCTSASPTPIAQISAGAQFSEKLEPK-FP 38
+ P +SA C + + G F EK +PK FP
Sbjct: 420 EEPKKSADECKKHTTEQACKGEKGCDFDEKKDPKCFP 456
>M.Javanica_Scaff18629g079164 on XP_804817 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 769
Score = 23.1 bits (48), Expect = 1.3, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 13 TSASPTPIAQISAGAQFSEKLEP 35
TS P+P I AG SE+ +P
Sbjct: 75 TSPMPSPKVLIDAGGSVSEREQP 97
>M.Javanica_Scaff18629g079164 on XP_816459 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 904
Score = 22.7 bits (47), Expect = 1.7, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 19/31 (61%)
Query: 1 MSQNPARSAGFCTSASPTPIAQISAGAQFSE 31
+ +NP+ + +++ TPI+ +S AQ +E
Sbjct: 735 LEKNPSEHSTVSSTSIITPISPVSPNAQKTE 765
>M.Javanica_Scaff18629g079164 on XP_828096 VSG (Establishment) [Trypanosoma brucei]
Length = 237
Score = 22.3 bits (46), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 18 TPIAQISAGAQFSEKLEPKFPKNLGAQFSRA 48
TP+ A + +EK EPK N+ + RA
Sbjct: 111 TPLTTAKAAIRLNEKTEPKEIANMVSVEDRA 141
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff16466g074647
(450 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAY44838 MSA-1 (Invasion) [Babesia bovis] 29 0.41
AAY44835 MSA-1 (Invasion) [Babesia bovis] 29 0.49
AAM45255 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum] 28 1.3
AAM45258 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum] 28 1.3
AAM45253 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum] 28 1.3
AAM45250 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum] 28 1.4
AAL23761 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum] 28 1.4
AAK49521 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum] 27 2.3
>M.Javanica_Scaff16466g074647 on AAY44838 MSA-1 (Invasion) [Babesia bovis]
Length = 266
Score = 29.3 bits (64), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Query: 272 SSSYYGSGLVQGQKGLNIDDSDTKNDGGGLQKYSGSQIFKSSHRDIQLPIREPSGQFQKP 331
++ YY + G N+ SD + GG SGS + R+ + R PSG QKP
Sbjct: 198 AAEYYKKKMGAGSGNSNMAPSDNSSTGGSGPAPSGSN---PTERESE--ARSPSGNLQKP 252
Query: 332 MT 333
T
Sbjct: 253 ET 254
>M.Javanica_Scaff16466g074647 on AAY44835 MSA-1 (Invasion) [Babesia bovis]
Length = 270
Score = 28.9 bits (63), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Query: 272 SSSYYGSGLVQGQKGLNIDDSDTKNDGGGLQKYSGSQIFKSSHRDIQLPIREPSGQFQKP 331
++ YY + G N+ SD + GG SGS + R+ + R PSG QKP
Sbjct: 198 AAEYYKKKMGAGSGNSNMAPSDNSSTGGSGPAPSGSN---PTERESE--ARSPSGNLQKP 252
Query: 332 MT 333
T
Sbjct: 253 ET 254
>M.Javanica_Scaff16466g074647 on AAM45255 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum]
Length = 616
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 87 DEKEIEKESLMNEEIGIKNKEMYDNT-------ARNYYTKHSKES-EIKSDDDIEGAGPS 138
D K+ E E +++ KNK+MYDN A Y + SKE ++ DD I P+
Sbjct: 530 DLKKSEYEKQVDKYTKDKNKKMYDNIDEVKNKEANVYLKEKSKECKDVNFDDKIFNESPN 589
Query: 139 KREKLPKKVD 148
+ E + KK D
Sbjct: 590 EYEDMCKKCD 599
>M.Javanica_Scaff16466g074647 on AAM45258 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum]
Length = 616
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 87 DEKEIEKESLMNEEIGIKNKEMYDNT-------ARNYYTKHSKES-EIKSDDDIEGAGPS 138
D K+ E E +++ KNK+MYDN A Y + SKE ++ DD I P+
Sbjct: 530 DLKKSEYEKQVDKYTKDKNKKMYDNIDEVKNKEANVYLKEKSKECKDVNFDDKIFNESPN 589
Query: 139 KREKLPKKVD 148
+ E + KK D
Sbjct: 590 EYEDMCKKCD 599
>M.Javanica_Scaff16466g074647 on AAM45253 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum]
Length = 616
Score = 27.7 bits (60), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 87 DEKEIEKESLMNEEIGIKNKEMYDNT-------ARNYYTKHSKES-EIKSDDDIEGAGPS 138
D K+ E E +++ KNK+MYDN A Y + SKE ++ DD I P+
Sbjct: 530 DLKKSEYEKQVDKYTKDKNKKMYDNIDEVKNKEANVYLKEKSKECKDVNFDDKIFNESPN 589
Query: 139 KREKLPKKVD 148
+ E + KK D
Sbjct: 590 EYEDMCKKCD 599
>M.Javanica_Scaff16466g074647 on AAM45250 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum]
Length = 616
Score = 27.7 bits (60), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 87 DEKEIEKESLMNEEIGIKNKEMYDNT-------ARNYYTKHSKES-EIKSDDDIEGAGPS 138
D K+ E E +++ KNK+MYDN A Y + SKE ++ DD I P+
Sbjct: 530 DLKKSEYEKQVDKYTKDKNKKMYDNIDEVKNKEANVYLKEKSKECKDVNFDDKIFNESPN 589
Query: 139 KREKLPKKVD 148
+ E + KK D
Sbjct: 590 EYEDMCKKCD 599
>M.Javanica_Scaff16466g074647 on AAL23761 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum]
Length = 616
Score = 27.7 bits (60), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 87 DEKEIEKESLMNEEIGIKNKEMYDNT-------ARNYYTKHSKES-EIKSDDDIEGAGPS 138
D K+ E E +++ KNK+MYDN A Y + SKE ++ DD I P+
Sbjct: 530 DLKKSEYEKQVDKYTKDKNKKMYDNIDEVKNKEANVYLKEKSKECKDVNFDDKIFNESPN 589
Query: 139 KREKLPKKVD 148
+ E + KK D
Sbjct: 590 EYEDMCKKCD 599
>M.Javanica_Scaff16466g074647 on AAK49521 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum]
Length = 1210
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 87 DEKEIEKESLMNEEIGIKNKEMYDNT-------ARNYYTKHSKES-EIKSDDDIEGAGPS 138
D K+ E E +++ KNK+MYDN A Y + SKE ++ DD I P+
Sbjct: 670 DLKKSEYEKQVDKYTKDKNKKMYDNIDEVKNKEANVYLKEKSKECKDVNFDDKIFNESPN 729
Query: 139 KREKLPKKVD 148
+ E + KK D
Sbjct: 730 EYEDMCKKCD 739
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff21067g083822
(75 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351435 PfEMP1 (Establishment) [Plasmodium falciparum] 22 6.7
>M.Javanica_Scaff21067g083822 on XP_001351435 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2209
Score = 21.9 bits (45), Expect = 6.7, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 20 KGERFLLYSRFILPKRDESEIICMVSRLLRREHLRRDLCAATF 62
KGE +S+ + K DE +I C S + R LC F
Sbjct: 93 KGEDVSRFSKERVSKYDEKKIGCSNSEGACAPYRRLSLCNKNF 135
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2388g022578
(166 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609166 variant erythrocyte surface antigen-1, beta subuni... 27 0.77
XP_001609449 variant erythrocyte surface antigen-1, beta subuni... 25 2.4
XP_843741 VSG (Establishment) [Trypanosoma brucei] 25 3.0
XP_843746 VSG (Establishment) [Trypanosoma brucei] 25 3.0
XP_001611441 variant erythrocyte surface antigen-1, beta subuni... 25 3.4
XP_806427 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.6
XP_001349207 EBA-175 (Adhesin) [Plasmodium falciparum] 25 3.6
XP_807448 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 8.4
>M.Javanica_Scaff2388g022578 on XP_001609166 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1161
Score = 26.6 bits (57), Expect = 0.77, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 9/71 (12%)
Query: 59 NDCQTNGTCVGGKVCECTCGENAPCTVPSISFLVETLNGSPQSKCGGLKNACNETTNKCE 118
+DC GT GK C+C G A S T +G+P +C + +E NKC
Sbjct: 146 DDCCLKGTDGIGKKCDCPSGVGA-------SGCCSTSSGTPCHQCS--QCGTSEAGNKCY 196
Query: 119 CEKAYKLAGFA 129
K G A
Sbjct: 197 LSAYCKKNGVA 207
>M.Javanica_Scaff2388g022578 on XP_001609449 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 776
Score = 25.0 bits (53), Expect = 2.4, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 61 CQTNGTCVGGKVCECTCGENAPCTVPSISFLVETLNGSPQSKCGGLKNACNET 113
C+T G+ G +C C +NA P ++FL + L K G K++ +ET
Sbjct: 661 CKTEGSGAGK---DCNCKKNASNESPLMAFLCDALGSMACKKTIG-KSSDSET 709
>M.Javanica_Scaff2388g022578 on XP_843741 VSG (Establishment) [Trypanosoma brucei]
Length = 365
Score = 24.6 bits (52), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 9/57 (15%)
Query: 89 SFLVETLNGSPQSKCGGLKNA--CNETTNKCECEKAYKLAGFANLTDAIERICAPAK 143
SF+V L G+ +S G K + NE K C GF NLT I+++ + K
Sbjct: 6 SFIVVLLTGTVESSKAGKKGSQILNENEFKTLC-------GFVNLTFEIQKLASEGK 55
>M.Javanica_Scaff2388g022578 on XP_843746 VSG (Establishment) [Trypanosoma brucei]
Length = 365
Score = 24.6 bits (52), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 9/57 (15%)
Query: 89 SFLVETLNGSPQSKCGGLKNA--CNETTNKCECEKAYKLAGFANLTDAIERICAPAK 143
SF+V L G+ +S G K + NE K C GF NLT I+++ + K
Sbjct: 6 SFIVVLLTGTVESSKAGKKGSQILNENEFKTLC-------GFVNLTFEIQKLASEGK 55
>M.Javanica_Scaff2388g022578 on XP_001611441 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1205
Score = 24.6 bits (52), Expect = 3.4, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 58 DNDCQTNGTCVGGKVCEC--TCGENAPCTVPSIS 89
+++C G GKVCEC T G A C P S
Sbjct: 139 EDECCLKGDKGIGKVCECPGTGGGGAQCCSPGTS 172
>M.Javanica_Scaff2388g022578 on XP_806427 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 886
Score = 24.6 bits (52), Expect = 3.6, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 6/81 (7%)
Query: 18 IYFNNGMVHNSLGDFNHEFWRADENNTQNQKCQDAAPCLSDNDCQTNGTCVGGKVCECTC 77
+Y NG +S G F+ Q Q+ +D + D + + C E T
Sbjct: 436 LYEKNGNEESSYGMFSVRL------TAQLQRVKDVLKTWKEVDERVSKLCTSLSALEGTS 489
Query: 78 GENAPCTVPSISFLVETLNGS 98
ENA TV LV L+G+
Sbjct: 490 TENACSTVDITDGLVGFLSGN 510
>M.Javanica_Scaff2388g022578 on XP_001349207 EBA-175 (Adhesin) [Plasmodium falciparum]
Length = 1462
Score = 24.6 bits (52), Expect = 3.6, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 11/53 (20%)
Query: 101 SKCGGLKNACNETTNKCECEKAYKLAGFANLTDAIERICAPAKSCAKNDDCFG 153
SK G KN+ + T EC+K YKL + + +C P + + + C G
Sbjct: 458 SKFGCDKNSVDTNTKVWECKKPYKL--------STKDVCVPPR---RQELCLG 499
>M.Javanica_Scaff2388g022578 on XP_807448 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 831
Score = 23.5 bits (49), Expect = 8.4, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 120 EKAYKLAGFANLTDAIERICAPAKSCAKNDDCFGM 154
++AY L LT+ +ERI K+ + DD G+
Sbjct: 437 DRAYSLVAM-RLTEQLERIKCAVKTWKELDDALGV 470
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff20628g083016
(80 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349030 PfEMP1 (Establishment) [Plasmodium falciparum] 25 0.38
XP_001349034 PfEMP1 (Establishment) [Plasmodium falciparum] 25 0.49
XP_001352170 MSP1 (Invasion) [Plasmodium falciparum] 22 8.7
>M.Javanica_Scaff20628g083016 on XP_001349030 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 25.4 bits (54), Expect = 0.38, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 2 PPSQPQPPQQPSQPPHFITKTF 23
PPSQP PQ + P +T T
Sbjct: 1713 PPSQPTTPQIVDKTPALVTSTL 1734
>M.Javanica_Scaff20628g083016 on XP_001349034 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 25.0 bits (53), Expect = 0.49, Method: Composition-based stats.
Identities = 7/12 (58%), Positives = 10/12 (83%)
Query: 6 PQPPQQPSQPPH 17
P+PP QP+ PP+
Sbjct: 1721 PKPPSQPTNPPN 1732
Score = 23.5 bits (49), Expect = 2.0, Method: Composition-based stats.
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 2 PPSQPQPPQQPSQPPHFI 19
PPSQP P P + P I
Sbjct: 1723 PPSQPTNPPNPFEHPAVI 1740
>M.Javanica_Scaff20628g083016 on XP_001352170 MSP1 (Invasion) [Plasmodium falciparum]
Length = 1720
Score = 21.6 bits (44), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 6/11 (54%), Positives = 10/11 (90%)
Query: 1 MPPSQPQPPQQ 11
+PP+QP PP++
Sbjct: 765 LPPTQPSPPKE 775
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1886g019079
(111 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_821390 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.51
XP_810383 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.8
XP_814623 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.0
XP_820670 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.1
>M.Javanica_Scaff1886g019079 on XP_821390 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 940
Score = 26.2 bits (56), Expect = 0.51, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 30 EWKRRILYCSPSKDGKHSGQCYLTVGKEEKPKLAKCHEESFKLETG 75
E ++R+ P+ + G+ Y+ VGK +A+C S K+++G
Sbjct: 156 EEEKRVDVSRPTAVAE-GGKIYMLVGKHSHEDVAECKATSEKIKSG 200
>M.Javanica_Scaff1886g019079 on XP_810383 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 928
Score = 24.6 bits (52), Expect = 1.8, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 30 EWKRRILYCSPSKDGKHSGQCYLTVGKEEKPKLAKCHEESFKLETG 75
E +RR+ P+ + G+ Y+ VGK +A+C S K ++G
Sbjct: 156 EEERRVDVSRPTAVVE-GGKIYMLVGKHSHGDVAECKATSEKTKSG 200
>M.Javanica_Scaff1886g019079 on XP_814623 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 895
Score = 24.3 bits (51), Expect = 2.0, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 51 YLTVGKEEKPKLAKCHEESFKLETG 75
Y+ VGK LA+C S K ++G
Sbjct: 194 YMLVGKHSHENLAECKATSEKFKSG 218
>M.Javanica_Scaff1886g019079 on XP_820670 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 883
Score = 23.9 bits (50), Expect = 3.1, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 51 YLTVGKEEKPKLAKCHEESFKLETG 75
Y+ VGK A C E+ K+++G
Sbjct: 181 YMLVGKHSHEAAANCQAETEKIKSG 205
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff21547g084632
(91 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001610497 variant erythrocyte surface antigen-1, alpha subun... 23 3.7
>M.Javanica_Scaff21547g084632 on XP_001610497 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1315
Score = 23.1 bits (48), Expect = 3.7, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 71 FGVLRGSLQNWIKQEKELS 89
FG RG + N +K+E +LS
Sbjct: 978 FGFFRGGVGNPVKKEGDLS 996
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2226g021515
(1935 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff24609g089608
(50 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum] 25 0.12
XP_001349219 PfEMP1 (Establishment) [Plasmodium falciparum] 23 0.78
XP_001351221 CTRP (Adhesin) [Plasmodium falciparum] 22 1.5
>M.Javanica_Scaff24609g089608 on XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3119
Score = 25.4 bits (54), Expect = 0.12, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 13 INNECQVSASQEEQQFSRQVRP 34
+NNEC +S + SR RP
Sbjct: 1302 LNNECDISLEHSNRNTSRSQRP 1323
>M.Javanica_Scaff24609g089608 on XP_001349219 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2595
Score = 23.1 bits (48), Expect = 0.78, Method: Composition-based stats.
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 13 INNECQVSASQEEQQFSRQVRPYAE 37
I NEC + ++ E QF R + + +
Sbjct: 1891 IENECTLPTTESEDQFLRWFQEWGK 1915
>M.Javanica_Scaff24609g089608 on XP_001351221 CTRP (Adhesin) [Plasmodium falciparum]
Length = 2112
Score = 22.3 bits (46), Expect = 1.5, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Query: 10 LLLINNECQVSASQEEQQFSRQVRPYAERAANQVNFD 46
L LI +E S S ++ + V P+AE+ N +N D
Sbjct: 306 LTLILDE---SRSITLDKWKKDVVPFAEKVLNNLNID 339
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff17529g076877
(108 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff18399g078704
(416 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_846883 VSG (Establishment) [Trypanosoma brucei] 29 0.60
AAW78169 TRAP (Invasion) [Plasmodium falciparum] 28 0.90
AAW78171 TRAP (Invasion) [Plasmodium falciparum] 27 2.6
AAW78134 TRAP (Invasion) [Plasmodium falciparum] 27 2.7
AAW78156 TRAP (Invasion) [Plasmodium falciparum] 26 4.4
AAW78167 TRAP (Invasion) [Plasmodium falciparum] 26 4.7
AAW78160 TRAP (Invasion) [Plasmodium falciparum] 26 5.0
AAW78131 TRAP (Invasion) [Plasmodium falciparum] 26 5.2
>M.Javanica_Scaff18399g078704 on XP_846883 VSG (Establishment) [Trypanosoma brucei]
Length = 525
Score = 28.9 bits (63), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 305 NTIFKTIRERVNLSLSKLPQFLSVSDI-LVTLFENF-NGTEECVKNGCNLTATPTTTTFS 362
N +F+T++ + ++ + Q + + L E F N ++EC +NGC T TT
Sbjct: 375 NRLFQTLKVQEPAAIPPISQLPRIDPLELKKKCEQFHNKSKECTENGCKWKGTDETTGTC 434
Query: 363 DYNLNKI 369
D + K+
Sbjct: 435 DVDETKV 441
>M.Javanica_Scaff18399g078704 on AAW78169 TRAP (Invasion) [Plasmodium falciparum]
Length = 551
Score = 28.1 bits (61), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 31 VEENNNFTSFSTPQLPSLPQTPSISSIFSSPEISWQLPTL 70
VE N F P+ PS P+ PS S+P+I Q P +
Sbjct: 337 VENRNGFDLDENPENPSNPENPSNPENPSNPDIPEQEPNI 376
>M.Javanica_Scaff18399g078704 on AAW78171 TRAP (Invasion) [Plasmodium falciparum]
Length = 551
Score = 26.9 bits (58), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 32 EENNNFTSFSTPQLPSLPQTPSISSIFSSPEISWQLPTL 70
E N F P+ PS P+ PS S+P+I Q P +
Sbjct: 338 ENRNGFDLDENPENPSNPENPSNPENPSNPDIPEQEPNI 376
>M.Javanica_Scaff18399g078704 on AAW78134 TRAP (Invasion) [Plasmodium falciparum]
Length = 551
Score = 26.6 bits (57), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 32 EENNNFTSFSTPQLPSLPQTPSISSIFSSPEISWQLPTL 70
E N F P+ PS P+ PS S+P+I Q P +
Sbjct: 338 ENRNGFDLDENPENPSNPENPSNPENPSNPDIPEQEPNI 376
>M.Javanica_Scaff18399g078704 on AAW78156 TRAP (Invasion) [Plasmodium falciparum]
Length = 581
Score = 26.2 bits (56), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 36 NFTSFSTPQLPSLPQTPSISSIFSSPEISWQLPTL 70
N + S P+ PS P+ PS S+P+I Q P +
Sbjct: 372 NPENPSNPENPSNPENPSNPENPSNPDIPEQKPNI 406
>M.Javanica_Scaff18399g078704 on AAW78167 TRAP (Invasion) [Plasmodium falciparum]
Length = 575
Score = 26.2 bits (56), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 36 NFTSFSTPQLPSLPQTPSISSIFSSPEISWQLPTL 70
N + S P+ PS P+ PS S+P+I Q P +
Sbjct: 366 NPENPSNPENPSNPENPSNPENPSNPDIPEQKPNI 400
>M.Javanica_Scaff18399g078704 on AAW78160 TRAP (Invasion) [Plasmodium falciparum]
Length = 557
Score = 25.8 bits (55), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 41 STPQLPSLPQTPSISSIFSSPEISWQLPTL 70
S P+ PS P+ PS S+P+I Q P +
Sbjct: 353 SNPENPSNPENPSNPENPSNPDIPEQEPNI 382
>M.Javanica_Scaff18399g078704 on AAW78131 TRAP (Invasion) [Plasmodium falciparum]
Length = 557
Score = 25.8 bits (55), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 41 STPQLPSLPQTPSISSIFSSPEISWQLPTL 70
S P+ PS P+ PS S+P+I Q P +
Sbjct: 353 SNPENPSNPENPSNPENPSNPDIPEQEPNI 382
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff16890g075546
(272 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_819341 Trans-sialidase (Invasion) [Trypanosoma cruzi] 33 0.013
XP_815845 Trans-sialidase (Invasion) [Trypanosoma cruzi] 33 0.020
XP_818480 Trans-sialidase (Invasion) [Trypanosoma cruzi] 32 0.030
XP_812339 Trans-sialidase (Invasion) [Trypanosoma cruzi] 32 0.034
XP_821390 Trans-sialidase (Invasion) [Trypanosoma cruzi] 32 0.048
XP_809283 Trans-sialidase (Invasion) [Trypanosoma cruzi] 31 0.064
XP_820663 Trans-sialidase (Invasion) [Trypanosoma cruzi] 31 0.083
XP_808179 Trans-sialidase (Invasion) [Trypanosoma cruzi] 31 0.086
XP_809850 Trans-sialidase (Invasion) [Trypanosoma cruzi] 31 0.088
XP_814620 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.12
XP_818344 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.13
XP_810288 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.14
XP_814625 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.18
XP_821910 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.24
XP_812771 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.36
XP_817382 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.37
XP_815166 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.39
XP_805613 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.40
XP_810237 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.41
XP_816764 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.45
XP_807358 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.46
XP_812152 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.47
XP_814186 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.49
XP_806556 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.52
XP_804273 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.57
XP_813429 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.57
XP_821137 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.58
XP_821902 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.62
XP_820662 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.62
XP_820757 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.64
XP_807743 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.66
XP_816303 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.82
XP_820303 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.82
XP_816233 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.87
XP_822026 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.88
XP_810496 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.89
XP_812607 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.90
XP_812313 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.91
XP_804819 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.0
XP_803204 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.0
XP_821088 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.0
XP_818399 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.1
XP_811703 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.1
XP_820458 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.1
XP_808182 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.2
XP_808550 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.3
XP_821909 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.3
XP_813677 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.3
XP_822014 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.3
XP_812697 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.3
XP_818096 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.4
XP_807738 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.4
XP_818403 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.4
XP_818308 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.4
XP_806401 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.5
XP_816389 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.5
XP_809902 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.7
XP_821548 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.7
XP_810753 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.7
XP_811406 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.7
XP_821712 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.7
XP_821669 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.8
XP_804820 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.8
XP_815498 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.8
XP_815662 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.8
XP_817003 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.8
XP_819343 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.9
XP_813578 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.9
XP_817993 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.9
XP_811934 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.0
XP_809198 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.0
XP_807798 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.0
XP_808639 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.1
XP_812751 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.1
XP_812988 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.1
XP_821677 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.1
XP_808081 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.1
XP_817877 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.1
XP_812311 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.1
XP_812314 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.2
XP_806427 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.2
XP_813726 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.2
XP_806431 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.2
XP_813642 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.2
XP_818193 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.3
XP_816459 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.3
XP_820307 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.3
XP_820300 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.3
XP_810383 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.3
XP_805336 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.5
XP_815148 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.6
XP_818708 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.6
XP_815842 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.7
XP_821703 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.7
XP_821438 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.7
XP_818477 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.8
XP_822017 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.8
XP_817615 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.9
XP_811309 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.9
XP_820393 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.9
>M.Javanica_Scaff16890g075546 on XP_819341 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 888
Score = 33.5 bits (75), Expect = 0.013, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Query: 90 NEEGSEGEVHEGEGQHYNIEEEWEEMPSASQGQTSRYHFVD 130
NE G++ +HEG W E P SQGQ YHF +
Sbjct: 552 NEGGNKAALHEGS---VKFTGAWAEWPVGSQGQNQLYHFAN 589
>M.Javanica_Scaff16890g075546 on XP_815845 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 936
Score = 32.7 bits (73), Expect = 0.020, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 51/130 (39%), Gaps = 15/130 (11%)
Query: 29 MSCWNSLGNLCPDICRGFNFQEWINTCWNNFCTTCNNVF--------GNQNANQCDYQSV 80
++ W ++ +L ++C N ++ T N C+ + + GN + N + +
Sbjct: 474 LATWKTVDDLVSELCPSENAKKDAPT--ENACSPTDKITAGLVGFLSGNFSENTWRDEYL 531
Query: 81 GEGGYQTEYNEEGSEGEVHEGEGQHYNIEEEWEEMPSASQGQTSRYHFVDEEECEAEYEE 140
G ++ G + +HEG + W E P QG+ YHF +
Sbjct: 532 GVNATVKNNDDGGKKATLHEGS---VKFQGAWAEWPVGKQGENQLYHFANYNFTLV--AT 586
Query: 141 DEYEGEPQEE 150
+GEP EE
Sbjct: 587 VSIDGEPTEE 596
>M.Javanica_Scaff16890g075546 on XP_818480 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 926
Score = 32.3 bits (72), Expect = 0.030, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Query: 68 GNQNANQCDYQSVGEGGYQTEYNEEGSEGEVHEGEGQHYNIEEEWEEMPSASQGQTSRYH 127
GN + N + +G N+ G + +HEG + W E P SQG+ YH
Sbjct: 511 GNFSDNTWKDEYLGVNATVKGNNDGGKKATLHEGR---VTFKGAWAEWPVGSQGENQLYH 567
Query: 128 FVD 130
F +
Sbjct: 568 FAN 570
>M.Javanica_Scaff16890g075546 on XP_812339 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 949
Score = 32.0 bits (71), Expect = 0.034, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Query: 90 NEEGSEGEVHEGEGQHYNIEEEWEEMPSASQGQTSRYHFVDEEECEAEYEEDEYEGEPQE 149
++EG + +HEG + W E P QG+ YHF + EGEP E
Sbjct: 537 DDEGKKATLHEGS---VKFQGAWAEWPVGEQGENQLYHFANYNFTLV--ATVSIEGEPTE 591
Query: 150 E 150
E
Sbjct: 592 E 592
>M.Javanica_Scaff16890g075546 on XP_821390 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 940
Score = 31.6 bits (70), Expect = 0.048, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 14/85 (16%)
Query: 53 NTCWNNFCTT-------CNNVFGNQNANQCDYQSVGEGGYQTEYNEEGSEGEVHEGEGQH 105
N C + F T +N+FGN ++ +G ++ G + +HEG
Sbjct: 493 NACSSTFKITDGLVGFLSDNIFGNTWRDE----YLGVNATVKNNDDGGKKATLHEGS--- 545
Query: 106 YNIEEEWEEMPSASQGQTSRYHFVD 130
+ W E P SQG+ YHF +
Sbjct: 546 VTFQGAWAEWPVGSQGENQLYHFAN 570
>M.Javanica_Scaff16890g075546 on XP_809283 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 844
Score = 31.2 bits (69), Expect = 0.064, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Query: 90 NEEGSEGEVHEGEGQHYNIEEEWEEMPSASQGQTSRYHFVD 130
+E G + +HEG + W E P SQG+ YHF +
Sbjct: 555 DEGGKKATLHEGS---VKFQGAWAEWPVGSQGENQLYHFAN 592
>M.Javanica_Scaff16890g075546 on XP_820663 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 928
Score = 30.8 bits (68), Expect = 0.083, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Query: 90 NEEGSEGEVHEGEGQHYNIEEEWEEMPSASQGQTSRYHFVD 130
N+ G++ +HEG W E P SQG+ YHF +
Sbjct: 539 NDGGNKATLHEGS---VKFTGAWAEWPVGSQGENQLYHFAN 576
>M.Javanica_Scaff16890g075546 on XP_808179 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 942
Score = 30.8 bits (68), Expect = 0.086, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 5/60 (8%)
Query: 90 NEEGSEGEVHEGEGQHYNIEEEWEEMPSASQGQTSRYHFVDEEECEAEYEEDEYEGEPQE 149
N+ G + +HEG W E P SQG+ YHF + +GEPQE
Sbjct: 537 NDGGKKATLHEGS---VKFTGAWAEWPVGSQGENQLYHFANYNFTLV--ATVSIDGEPQE 591
>M.Javanica_Scaff16890g075546 on XP_809850 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 915
Score = 30.8 bits (68), Expect = 0.088, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 91 EEGSEGEVHEGEGQHYNIEEEWEEMPSASQGQTSRYHFVD 130
++G+ G + G G + W E P QG+ YHF +
Sbjct: 546 KDGAAGAILHGGGVKFTGRGAWAEWPVGEQGENQLYHFAN 585
>M.Javanica_Scaff16890g075546 on XP_814620 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 931
Score = 30.4 bits (67), Expect = 0.12, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Query: 90 NEEGSEGEVHEGEGQHYNIEEEWEEMPSASQGQTSRYHFVD 130
N+ G + ++HEG W E P QG+ YHF +
Sbjct: 540 NDGGKKAKLHEGS---VKFRGAWAEWPVGKQGENQLYHFAN 577
>M.Javanica_Scaff16890g075546 on XP_818344 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 928
Score = 30.4 bits (67), Expect = 0.13, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Query: 90 NEEGSEGEVHEGEGQHYNIEEEWEEMPSASQGQTSRYHFVD 130
NE ++ ++HEG + + W E P QG+ YHF +
Sbjct: 534 NEGAAKAKLHEGSVKFHG---AWAEWPVGEQGENQLYHFAN 571
>M.Javanica_Scaff16890g075546 on XP_810288 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 874
Score = 30.0 bits (66), Expect = 0.14, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 5/60 (8%)
Query: 90 NEEGSEGEVHEGEGQHYNIEEEWEEMPSASQGQTSRYHFVDEEECEAEYEEDEYEGEPQE 149
N+EG++ +H G + W E P QG+ YHF + +GEPQE
Sbjct: 536 NDEGNKATLHAG---GVTFKGAWAEWPVGRQGENQPYHFANYNFTLV--ATVSIDGEPQE 590
>M.Javanica_Scaff16890g075546 on XP_814625 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 941
Score = 29.6 bits (65), Expect = 0.18, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Query: 90 NEEGSEGEVHEGEGQHYNIEEEWEEMPSASQGQTSRYHFVD 130
N+ G++ +HEG W E P QG+ YHF +
Sbjct: 536 NDGGNKATLHEGS---VKFRGAWAEWPVGKQGENQLYHFAN 573
>M.Javanica_Scaff16890g075546 on XP_821910 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 853
Score = 29.3 bits (64), Expect = 0.24, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 92 EGSEGEVHEGEGQHYNIEEEWEEMPSASQGQTSRYHFVD 130
+G++G +G + + W E P SQGQ YHF +
Sbjct: 553 KGNDGATKTSDGVTF--QGAWAEWPVGSQGQNQLYHFAN 589
>M.Javanica_Scaff16890g075546 on XP_812771 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 924
Score = 28.9 bits (63), Expect = 0.36, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Query: 90 NEEGSEGEVHEGEGQHYNIEEEWEEMPSASQGQTSRYHFVD 130
N+ G++ +HEG W E P SQG+ +HF +
Sbjct: 534 NDGGNKATLHEG---GVKFTGAWAEWPVGSQGENQLFHFAN 571
>M.Javanica_Scaff16890g075546 on XP_817382 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 836
Score = 28.9 bits (63), Expect = 0.37, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Query: 90 NEEGSEGEVHEGEGQHYNIEEEWEEMPSASQGQTSRYHFVDEE 132
N+EG+E +V G W E P SQGQ YHF + +
Sbjct: 538 NKEGAE-QVDSG----VKFRGAWAEWPVGSQGQNQLYHFANHK 575
>M.Javanica_Scaff16890g075546 on XP_815166 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 894
Score = 28.9 bits (63), Expect = 0.39, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Query: 92 EGSEGEVHEGEGQHYNIEEEWEEMPSASQGQTSRYHFVD 130
EG +GEV E + W E P QG+ YHF +
Sbjct: 555 EGKKGEVTSTE-KGVKFRGAWAEWPVGEQGENQLYHFAN 592
>M.Javanica_Scaff16890g075546 on XP_805613 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 874
Score = 28.9 bits (63), Expect = 0.40, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 90 NEEGSEGEVHEGEGQHYNIEEEWEEMPSASQGQTSRYHFVD 130
N +G G +G + + W E P SQG+ YHF +
Sbjct: 540 NGDGETGATKTSDGVKF--QGAWAEWPVGSQGENQLYHFAN 578
>M.Javanica_Scaff16890g075546 on XP_810237 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 922
Score = 28.5 bits (62), Expect = 0.41, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 11/57 (19%)
Query: 82 EGGYQTEY--------NEEGSEGEVHEGEGQHYNIEEEWEEMPSASQGQTSRYHFVD 130
+G ++ EY N+EG+E G + W E P SQG+ YHF +
Sbjct: 517 DGTWRDEYLGVNATVSNKEGAE---QVDSGVKFTSRGVWAEWPVGSQGENQLYHFAN 570
>M.Javanica_Scaff16890g075546 on XP_816764 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 868
Score = 28.5 bits (62), Expect = 0.45, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 90 NEEGSEGEVHEGEGQHYNIEEEWEEMPSASQGQTSRYHFVD 130
N++G +G +G ++ W E P QG+ YHF +
Sbjct: 530 NDDGEKGATKTSDGVQFH--GAWAEWPVGEQGENQLYHFAN 568
>M.Javanica_Scaff16890g075546 on XP_807358 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 872
Score = 28.5 bits (62), Expect = 0.46, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 91 EEGSEGEVHEGEGQHYNIEEEWEEMPSASQGQTSRYHFVD 130
+EG+E +V E + W E P SQGQT Y+F +
Sbjct: 617 KEGTEKKVTSTE-KGVTFRGAWVEWPVGSQGQTVPYYFAN 655
>M.Javanica_Scaff16890g075546 on XP_812152 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 923
Score = 28.5 bits (62), Expect = 0.47, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
Query: 92 EGSEGEVHEGEGQHYNIEE------EWEEMPSASQGQTSRYHFVD 130
+G++GE + E + E+ W E P SQG+ YHF +
Sbjct: 557 KGNDGEKKKAEAATVDSEKGVRFQGAWAEWPVGSQGENQLYHFAN 601
>M.Javanica_Scaff16890g075546 on XP_814186 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 883
Score = 28.5 bits (62), Expect = 0.49, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 112 WEEMPSASQGQTSRYHFVD 130
W E P SQG+ YHFV+
Sbjct: 548 WAEWPVGSQGENQLYHFVN 566
>M.Javanica_Scaff16890g075546 on XP_806556 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 844
Score = 28.5 bits (62), Expect = 0.52, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 92 EGSEGEVHEGEGQHYNIEEEWEEMPSASQGQTSRYHFVD 130
+G++G +G + + W E P SQG+ YHF +
Sbjct: 545 KGNDGATEASDGVKF--QGAWAEWPVGSQGENQLYHFAN 581
>M.Javanica_Scaff16890g075546 on XP_804273 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 369
Score = 28.1 bits (61), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 91 EEGSEGEVHEGEGQHYNIEEEWEEMPSASQGQTSRYHFVD 130
+EG+E +V E + W E P SQGQT Y+F +
Sbjct: 114 KEGTEKKVTSTE-KGVTFRGAWVEWPVGSQGQTVPYYFAN 152
>M.Javanica_Scaff16890g075546 on XP_813429 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 818
Score = 28.1 bits (61), Expect = 0.57, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 112 WEEMPSASQGQTSRYHFVD 130
W E P SQGQ YHF +
Sbjct: 547 WAEWPVGSQGQNQLYHFAN 565
>M.Javanica_Scaff16890g075546 on XP_821137 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 956
Score = 28.1 bits (61), Expect = 0.58, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 112 WEEMPSASQGQTSRYHFVD 130
W E P SQGQ YHF +
Sbjct: 574 WAEWPVGSQGQNQLYHFAN 592
>M.Javanica_Scaff16890g075546 on XP_821902 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 854
Score = 28.1 bits (61), Expect = 0.62, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 92 EGSEGEVHEGEGQHYNIEEEWEEMPSASQGQTSRYHFVD 130
+G++G +G + + W E P SQG+ YHF +
Sbjct: 553 KGNDGATKTSDGVTF--QGAWAEWPVGSQGENQLYHFAN 589
>M.Javanica_Scaff16890g075546 on XP_820662 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 956
Score = 28.1 bits (61), Expect = 0.62, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Query: 90 NEEGSEGEVHEGEGQHYNIEEEWEEMPSASQGQTSRYHFVD 130
NE G + +H + W E P SQG+ YHF +
Sbjct: 551 NEGGKKATLH---ASGVTFQGTWAEWPVGSQGENQLYHFAN 588
>M.Javanica_Scaff16890g075546 on XP_820757 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 912
Score = 28.1 bits (61), Expect = 0.64, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 4/44 (9%)
Query: 87 TEYNEEGSEGEVHEGEGQHYNIEEEWEEMPSASQGQTSRYHFVD 130
TE E + +G H W E P SQGQ YHF +
Sbjct: 548 TELTEATGAAKAEDGVTFH----GAWAEWPVGSQGQNQLYHFAN 587
>M.Javanica_Scaff16890g075546 on XP_807743 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 931
Score = 28.1 bits (61), Expect = 0.66, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Query: 90 NEEGSEGEVHEGEGQHYNIEEEWEEMPSASQGQTSRYHFVD 130
++ G + +HEG + W E P QG+ YHF +
Sbjct: 536 DDGGKKATLHEGS---VKFQGAWAEWPIGRQGENQLYHFAN 573
>M.Javanica_Scaff16890g075546 on XP_816303 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 955
Score = 27.7 bits (60), Expect = 0.82, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 112 WEEMPSASQGQTSRYHFVD 130
W E P SQGQ YHF +
Sbjct: 566 WAEWPVGSQGQNQLYHFAN 584
>M.Javanica_Scaff16890g075546 on XP_820303 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 873
Score = 27.7 bits (60), Expect = 0.82, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 18/47 (38%)
Query: 84 GYQTEYNEEGSEGEVHEGEGQHYNIEEEWEEMPSASQGQTSRYHFVD 130
G G+E + E + W E P SQG+ YHF +
Sbjct: 531 GVNATVENNGAEDDGAEPAENGVKFQGAWAEWPVGSQGENQPYHFAN 577
>M.Javanica_Scaff16890g075546 on XP_816233 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 851
Score = 27.7 bits (60), Expect = 0.87, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 112 WEEMPSASQGQTSRYHFVD 130
W E P SQGQ YHF +
Sbjct: 569 WAEWPVGSQGQNQLYHFAN 587
>M.Javanica_Scaff16890g075546 on XP_822026 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 888
Score = 27.7 bits (60), Expect = 0.88, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 46/129 (35%), Gaps = 19/129 (14%)
Query: 29 MSCWNSLGNLCPDICRGFNFQEWINTCWNNFCTTCNNVF--------GNQNANQCDYQSV 80
++ W + +C N E +T + C+T + GN + + + +
Sbjct: 463 LTTWKEVDERVSKLCPSENALE--DTSTDTACSTTGTITDGLVGFLSGNFSNDTWKDEYL 520
Query: 81 GEGGYQTEYNEEGSEGEVHEGEGQHYNIEEEWEEMPSASQGQTSRYHFVDEEECEAEYEE 140
G T E+ G +G G W E P QG+ YHF + +
Sbjct: 521 GVNATVTNGAEKTDNGVTFKGRGA-------WAEWPVGKQGENQLYHFANHKFTLV--AT 571
Query: 141 DEYEGEPQE 149
+ GEP+E
Sbjct: 572 VSFHGEPKE 580
>M.Javanica_Scaff16890g075546 on XP_810496 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 943
Score = 27.7 bits (60), Expect = 0.89, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 91 EEGSEGEVHEGEGQHYNIE--EEWEEMPSASQGQTSRYHFVD 130
EEG+ V E G ++ W E P QG+ YHF +
Sbjct: 542 EEGASAGVAETAGSSDGVKFRGAWAEWPVGRQGENQLYHFAN 583
>M.Javanica_Scaff16890g075546 on XP_812607 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 957
Score = 27.7 bits (60), Expect = 0.90, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 4/59 (6%)
Query: 91 EEGSEGEVHEGEGQHYNIEEEWEEMPSASQGQTSRYHFVDEEECEAEYEEDEYEGEPQE 149
++G G +G + + W E P +QG+ YHF + +GEPQE
Sbjct: 550 DDGEAGATKTSDGVKF--QGAWAEWPVGAQGENQLYHFANYNFTLV--ATVSIDGEPQE 604
>M.Javanica_Scaff16890g075546 on XP_812313 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 920
Score = 27.7 bits (60), Expect = 0.91, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 16/36 (44%)
Query: 95 EGEVHEGEGQHYNIEEEWEEMPSASQGQTSRYHFVD 130
EG V +G + W E P QG+ YHF +
Sbjct: 533 EGAVQVEKGVTFTGRGVWAEWPVGKQGENQLYHFAN 568
>M.Javanica_Scaff16890g075546 on XP_804819 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 266
Score = 26.9 bits (58), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 91 EEGSEGEVHEGEGQHYNIEEEWEEMPSASQGQTSRYHFVD 130
++G+E +V E + W E P SQGQT Y+F +
Sbjct: 26 KKGTEKKVTSTE-KGVTFRGAWVEWPVGSQGQTVPYYFAN 64
>M.Javanica_Scaff16890g075546 on XP_803204 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 700
Score = 27.3 bits (59), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 4/44 (9%)
Query: 91 EEGSEGEVHE----GEGQHYNIEEEWEEMPSASQGQTSRYHFVD 130
EEG+ V E +G + W E P SQG+ YHF +
Sbjct: 540 EEGASAAVAEKAESSDGVKFTGRGAWAEWPVGSQGENQLYHFAN 583
>M.Javanica_Scaff16890g075546 on XP_821088 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 910
Score = 27.3 bits (59), Expect = 1.0, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 112 WEEMPSASQGQTSRYHFVD 130
W E P SQG+ +YHF +
Sbjct: 566 WAEWPVGSQGENQQYHFAN 584
>M.Javanica_Scaff16890g075546 on XP_818399 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 953
Score = 27.3 bits (59), Expect = 1.1, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 4/47 (8%)
Query: 84 GYQTEYNEEGSEGEVHEGEGQHYNIEEEWEEMPSASQGQTSRYHFVD 130
G +TE E + +G H W E P SQG+ YHF +
Sbjct: 547 GGETENTRETGATKTSDGVKFH----GAWAEWPVGSQGENQLYHFAN 589
>M.Javanica_Scaff16890g075546 on XP_811703 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1043
Score = 27.3 bits (59), Expect = 1.1, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 93 GSEGEVHEG-EGQHYNIEEEWEEMPSASQGQTSRYHFVDEE 132
GS G+ EG G + + W E P GQT Y+F + +
Sbjct: 520 GSAGKRIEGPNGLTFKVSGAWAEWPVGDMGQTVPYYFANNK 560
>M.Javanica_Scaff16890g075546 on XP_820458 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 923
Score = 27.3 bits (59), Expect = 1.1, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 5/57 (8%)
Query: 93 GSEGEVHEGEGQHYNIEEEWEEMPSASQGQTSRYHFVDEEECEAEYEEDEYEGEPQE 149
G + ++HEG + W E P QG YHF + +GEPQE
Sbjct: 549 GKKAKLHEGS---VKFQGAWAEWPVGKQGVNQLYHFANYNFTLV--ATVSIDGEPQE 600
>M.Javanica_Scaff16890g075546 on XP_808182 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 918
Score = 27.3 bits (59), Expect = 1.2, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Query: 87 TEYNEEGSEGEVHEGE-GQHYNIEEEWEEMPSASQGQTSRYHFVD 130
T N++G GE + + + W E P QG+ YHF +
Sbjct: 530 TVTNKDGDAGETKATKTSEGVKFKGAWAEWPVGEQGENQPYHFAN 574
>M.Javanica_Scaff16890g075546 on XP_808550 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 948
Score = 26.9 bits (58), Expect = 1.3, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 107 NIEEEWEEMPSASQGQTSRYHFVD 130
N W E P SQG+ YHF +
Sbjct: 569 NFTGAWAEWPVGSQGENQLYHFAN 592
>M.Javanica_Scaff16890g075546 on XP_821909 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 954
Score = 26.9 bits (58), Expect = 1.3, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 17/43 (39%), Gaps = 5/43 (11%)
Query: 93 GSEGEVHEGEG-----QHYNIEEEWEEMPSASQGQTSRYHFVD 130
G VH EG + W E P SQG+ YHF +
Sbjct: 543 GVNATVHNKEGATKTSDGVKFQGAWAEWPVGSQGENQLYHFAN 585
>M.Javanica_Scaff16890g075546 on XP_813677 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 945
Score = 26.9 bits (58), Expect = 1.3, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 107 NIEEEWEEMPSASQGQTSRYHFVD 130
N W E P SQG+ YHF +
Sbjct: 569 NFTGAWAEWPVGSQGENQLYHFAN 592
>M.Javanica_Scaff16890g075546 on XP_822014 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 950
Score = 26.9 bits (58), Expect = 1.3, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 91 EEGSEGEVHEGEGQHYNIEEEWEEMPSASQGQTSRYHFVD 130
E +E +H +G ++ W E P QG+ YHF +
Sbjct: 598 ELATEATLH-ADGVNFTGRGAWAEWPVGEQGENQLYHFAN 636
>M.Javanica_Scaff16890g075546 on XP_812697 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 911
Score = 26.9 bits (58), Expect = 1.3, Method: Composition-based stats.
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 112 WEEMPSASQGQTSRYHF 128
W E P SQG+ +YHF
Sbjct: 567 WAEWPVGSQGENQQYHF 583
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff24564g089548
(170 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_843647 VSG (Establishment) [Trypanosoma brucei] 25 2.9
AAW78135 TRAP (Invasion) [Plasmodium falciparum] 25 3.3
AAW78147 TRAP (Invasion) [Plasmodium falciparum] 25 3.5
XP_001349737 PfEMP1 (Establishment) [Plasmodium falciparum] 25 4.1
XP_804892 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.8
AAA30134 SPAG-1 (Adhesion) [Theileria annulata] 24 6.3
>M.Javanica_Scaff24564g089548 on XP_843647 VSG (Establishment) [Trypanosoma brucei]
Length = 543
Score = 25.0 bits (53), Expect = 2.9, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 29/73 (39%), Gaps = 1/73 (1%)
Query: 1 MGHARLAAGRLAAADLSRPTCRRPTCREADLSPADLPPSFLINTPLPQGLRGKK-FLPLR 59
MGH R A+ A LS PT A LS + P + P + KK F+ +
Sbjct: 147 MGHNRGASNYGYLAQLSSPTSPATDAATAQLSSCKIKPHDITEGPEETEVLTKKGFVGMD 206
Query: 60 RKPGMSSGTTAAA 72
G+ G ++
Sbjct: 207 HGTGLVDGVLTSS 219
>M.Javanica_Scaff24564g089548 on AAW78135 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 24.6 bits (52), Expect = 3.3, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 94 RIASYNVCYTKLXRACRAERRPPLRYGRRERSEHDRSEARP 134
R S+ C +++ C ER PP R E + E RP
Sbjct: 266 REISHEGCTSEIQEQCEEERCPPKREPLDVPHEPEDDEPRP 306
>M.Javanica_Scaff24564g089548 on AAW78147 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 24.6 bits (52), Expect = 3.5, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 94 RIASYNVCYTKLXRACRAERRPPLRYGRRERSEHDRSEARP 134
R S+ C +++ C ER PP R E + E RP
Sbjct: 266 REISHEGCTSEIQEQCEEERCPPKREPLDVPHEPEDDEPRP 306
>M.Javanica_Scaff24564g089548 on XP_001349737 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2199
Score = 24.6 bits (52), Expect = 4.1, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 53 KKFLPLRRKPGMSSGTTAAASLRSP 77
KK +RKPG +SG T +L P
Sbjct: 1650 KKIDECKRKPGENSGQTCNETLTHP 1674
>M.Javanica_Scaff24564g089548 on XP_804892 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1046
Score = 24.3 bits (51), Expect = 4.8, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Query: 25 TCREADLSPADLPPSFLINTPLP-QGLRG 52
TCR DLP + N P+P GL G
Sbjct: 476 TCRSGSSGTVDLPTKGMCNGPVPTDGLVG 504
>M.Javanica_Scaff24564g089548 on AAA30134 SPAG-1 (Adhesion) [Theileria annulata]
Length = 907
Score = 23.9 bits (50), Expect = 6.3, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 14 ADLSRPTCRRPTCREADLSPA 34
DLS P+ R P + A+L P+
Sbjct: 797 GDLSDPSSRTPNAKPAELGPS 817
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1746g018034
(69 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_846884 VSG (Establishment) [Trypanosoma brucei] 23 1.3
XP_001611365 variant erythrocyte surface antigen-1, alpha subun... 22 3.2
XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum] 22 3.4
AAA83031 Hemolysin (Invasion) [Cryptosporidium parvum] 22 3.7
XP_001351079 PfEMP1 (Establishment) [Plasmodium falciparum] 21 7.8
>M.Javanica_Scaff1746g018034 on XP_846884 VSG (Establishment) [Trypanosoma brucei]
Length = 493
Score = 23.5 bits (49), Expect = 1.3, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 16 SAIESDPNINLNNPKDYFENY 36
SA+ SDPN L N K +N+
Sbjct: 290 SALSSDPNWALFNAKALLDNF 310
>M.Javanica_Scaff1746g018034 on XP_001611365 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1335
Score = 22.3 bits (46), Expect = 3.2, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 7/39 (17%)
Query: 26 LNNPKDYFENYINCLPDQGSRIIR-------TEEAIPIC 57
L N KD E Y + + D RII+ +E I IC
Sbjct: 808 LKNIKDEIEQYESDMDDNTGRIIQEKTFYKAVKELISIC 846
>M.Javanica_Scaff1746g018034 on XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3346
Score = 22.3 bits (46), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 24 INLNNPKDYFENYINCLP 41
I+ N PKD F + NC P
Sbjct: 1963 IDFNKPKDTFGHAKNCGP 1980
>M.Javanica_Scaff1746g018034 on AAA83031 Hemolysin (Invasion) [Cryptosporidium parvum]
Length = 229
Score = 22.3 bits (46), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Query: 12 NGLESAIESD--PNINLNNPKD--YFENYINCLPDQ 43
NG+E+ IE+ P+++L YFE YIN DQ
Sbjct: 192 NGIENGIENGDIPHVDLEQYTQLSYFEKYINFNIDQ 227
>M.Javanica_Scaff1746g018034 on XP_001351079 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2203
Score = 21.2 bits (43), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 21 DPNINLNNPKDYFENYINCLP 41
D ++ NPK+ F NC P
Sbjct: 1351 DDKLDFTNPKETFRPAKNCKP 1371
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff20948g083594
(90 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_810068 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.5
>M.Javanica_Scaff20948g083594 on XP_810068 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1147
Score = 23.5 bits (49), Expect = 2.5, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 4 SDLYQQQQPTNNVIVNNGIGEQTSNSTDS 32
S+ Y +QP N G GE TS T S
Sbjct: 946 SESYDTEQPVEEEEANGGSGESTSPVTAS 974
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff234g003786
(80 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351564 PfEMP1 (Establishment) [Plasmodium falciparum] 24 1.4
>M.Javanica_Scaff234g003786 on XP_001351564 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2207
Score = 23.9 bits (50), Expect = 1.4, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 4 ILNQTLSRVGVALDHSQCFSHDKLNVAL 31
IL + +SR+ A D ++ S DKL +L
Sbjct: 1568 ILEELISRIAAATDKAERGSLDKLKTSL 1595
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2196g021293
(212 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_807319 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.15
XP_812042 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.0
XP_001348015 AMA-1 (Invasion) [Plasmodium falciparum] 26 2.5
XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum] 25 3.4
XP_806299 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.1
XP_817165 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 8.1
>M.Javanica_Scaff2196g021293 on XP_807319 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1041
Score = 29.6 bits (65), Expect = 0.15, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Query: 142 VISSLIDSDTSSHFERTEDEEDEENEEEKRIERNDNTLNKSSNEEGESGKSLHNPIISS 200
V S I+ T+SH E TED+ D+ EE I + +S+ +G S+ P I++
Sbjct: 731 VPESTIEGSTTSHEELTEDDTDKREEESVHI-----LVPAASSSTDFAGSSVSEPAIAA 784
>M.Javanica_Scaff2196g021293 on XP_812042 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 227
Score = 25.8 bits (55), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/146 (17%), Positives = 57/146 (39%), Gaps = 26/146 (17%)
Query: 7 ILFLFFLFNLSTSEVVHLKGKLTCAGKGLTKASIELLEADLFEPDDLLGITNTDFKGFYE 66
+LFL F+ + C G G T +P+ G + + + +
Sbjct: 49 LLFLLFV--------------MMCRGSGATATD---------KPNSCQGSSPGKYFDWRD 85
Query: 67 IKGEQNEWFGKIDPYLRIKHNCSLKDNKTKEKKKCIYTHILPILIEAKDDLIEDDKNDID 126
KG++ ++ ++ + + + K C +T I +L+E K ++++ ++
Sbjct: 86 TKGDETVSLLRVPSFVEMNGDVFVVAEAQCTTKGCGFTGISSVLLELKGGTLKEELDESK 145
Query: 127 FYTL---EVAPSSEECTEVISSLIDS 149
T E + + +C+ I L DS
Sbjct: 146 LKTQVLDECSFEAGQCSSQIGVLADS 171
>M.Javanica_Scaff2196g021293 on XP_001348015 AMA-1 (Invasion) [Plasmodium falciparum]
Length = 622
Score = 25.8 bits (55), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 23/46 (50%)
Query: 160 DEEDEENEEEKRIERNDNTLNKSSNEEGESGKSLHNPIISSTQPYY 205
D+ DE + K RND L+ ++ GE ++ H + +PYY
Sbjct: 577 DKMDEPQDYGKSNSRNDEMLDPEASFWGEEKRASHTTPVLMEKPYY 622
>M.Javanica_Scaff2196g021293 on XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3954
Score = 25.4 bits (54), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 64 FYEIKGEQNEWFGKIDPYLRIKHNCS 89
F E+KG NE K+ Y +K NCS
Sbjct: 3028 FNEVKGTMNENVKKLTAYEYLKQNCS 3053
>M.Javanica_Scaff2196g021293 on XP_806299 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1047
Score = 25.0 bits (53), Expect = 4.1, Method: Composition-based stats.
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 148 DSDTSSHFERTEDEEDEENE 167
+ T+SH E TED+ DE+ E
Sbjct: 744 EESTASHEELTEDDTDEQEE 763
>M.Javanica_Scaff2196g021293 on XP_817165 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 750
Score = 23.9 bits (50), Expect = 8.1, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 26/58 (44%)
Query: 123 NDIDFYTLEVAPSSEECTEVISSLIDSDTSSHFERTEDEEDEENEEEKRIERNDNTLN 180
N+ FY + SS E SSL+ SD H + D ++ R+ + +T+N
Sbjct: 414 NNRSFYFGPLGMSSAVEEEFASSLMYSDGKLHLLQRRDNGEDSALSLSRLTKEVSTIN 471
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff22403g086091
(56 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff24338g089190
(66 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_845142 VSG (Establishment) [Trypanosoma brucei] 22 4.5
ABV49611 Thymidine kinase (Invasion) [Leishmania donovani] 22 5.2
CAA70921 MIC5 (Others) [Toxoplasma gondii] 21 7.6
>M.Javanica_Scaff24338g089190 on XP_845142 VSG (Establishment) [Trypanosoma brucei]
Length = 481
Score = 21.9 bits (45), Expect = 4.5, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 12 QNISEDDEETKKEQIAEVERAYMTTEDRRNL 42
+N+ E K+ AEV R +TT +R L
Sbjct: 102 KNVLEVSHGQDKKSYAEVRRRQLTTAAKRKL 132
>M.Javanica_Scaff24338g089190 on ABV49611 Thymidine kinase (Invasion) [Leishmania donovani]
Length = 255
Score = 21.6 bits (44), Expect = 5.2, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Query: 19 EETKKEQIA--EVERAYMTTEDRR 40
EE + +Q+A EVE+ Y+ D+R
Sbjct: 186 EEMRTQQMAIKEVEKRYLGMSDKR 209
>M.Javanica_Scaff24338g089190 on CAA70921 MIC5 (Others) [Toxoplasma gondii]
Length = 231
Score = 21.2 bits (43), Expect = 7.6, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 9 ENNQNISEDDEETKKEQIAEVERAYMTTEDRRNLERFRRAERKFCSAEIE 58
E + I E EETK E E+ R M TE + + + A+ + S IE
Sbjct: 136 EFQEEIKEGVEETKHEDDPEMTR-LMVTEKQESKNFSKMAKSQSFSTRIE 184
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff22134g085634
(64 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff19430g080760
(277 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_818896 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.56
XP_818893 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.2
>M.Javanica_Scaff19430g080760 on XP_818896 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 725
Score = 28.1 bits (61), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 34/86 (39%), Gaps = 15/86 (17%)
Query: 3 LFNYFSLLILFIFNCWGDQQLPESVTPPIQTPPQQ----------EEIIMAIFVPA---- 48
LF LL+ F+ C G P+Q PP + EE + ++ VP+
Sbjct: 43 LFYSAVLLLFFVMICCGTGSASSKEKSPVQIPPPKTYFDWRDVKVEETVSSLRVPSLLKV 102
Query: 49 -GKVECIYQPIVNLKYNSFEVDYQVI 73
G V + + + K ++ E + I
Sbjct: 103 NGDVFAVAEALCTGKKDTGEGSFTGI 128
>M.Javanica_Scaff19430g080760 on XP_818893 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 956
Score = 26.6 bits (57), Expect = 2.2, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 10/56 (17%)
Query: 3 LFNYFSLLILFIFNCWGDQQLPESVTPPIQTPPQQ----------EEIIMAIFVPA 48
LF LL+ F+ C G P+Q PP + EE + ++ VP+
Sbjct: 43 LFYSAVLLLFFVMICCGTGSASSKEKSPVQIPPPKTYFDWRDVKVEETVSSLRVPS 98
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff19g000486
(239 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAD21780 ESAG-6 (Establishment) [Trypanosoma brucei] 27 1.4
CAD21872 ESAG-6 (Establishment) [Trypanosoma brucei] 27 1.5
AAA30187 ESAG-6 (Establishment) [Trypanosoma brucei] 26 2.2
XP_001349438 PfEMP1 (Establishment) [Plasmodium falciparum] 25 4.2
XP_001347691 PfEMP1 (Establishment) [Plasmodium falciparum] 25 6.0
XP_827747 VSG (Establishment) [Trypanosoma brucei] 24 7.0
XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum] 24 7.9
XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum] 24 8.1
XP_821910 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 8.4
XP_001351319 PfEMP1 (Establishment) [Plasmodium falciparum] 24 9.7
>M.Javanica_Scaff19g000486 on CAD21780 ESAG-6 (Establishment) [Trypanosoma brucei]
Length = 401
Score = 26.6 bits (57), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Query: 29 FLWETMYRVSSFKCLKEKYS---KEFVIINSNY 58
F+WET++R+ K + E+ S +E I+ SNY
Sbjct: 331 FIWETIHRLELSKRVSEQLSLGEEEETILKSNY 363
>M.Javanica_Scaff19g000486 on CAD21872 ESAG-6 (Establishment) [Trypanosoma brucei]
Length = 400
Score = 26.6 bits (57), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Query: 29 FLWETMYRVSSFKCLKEKYS---KEFVIINSNY 58
F+WET++R+ K + E+ S +E I+ SNY
Sbjct: 330 FIWETIHRLELSKRVSEQLSLGEEEETILKSNY 362
>M.Javanica_Scaff19g000486 on AAA30187 ESAG-6 (Establishment) [Trypanosoma brucei]
Length = 400
Score = 25.8 bits (55), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Query: 29 FLWETMYRVSSFKCLKEKYS---KEFVIINSNY 58
F+WET++R+ K + E+ S +E I+ SNY
Sbjct: 330 FIWETIHRLELSKRVSEQPSLGEEEETILKSNY 362
>M.Javanica_Scaff19g000486 on XP_001349438 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2265
Score = 25.4 bits (54), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 155 EMVNTLKE--RNQTFGFFTNKYNWHDITGNTRKYN 187
EM+ +KE R+ T G + HD T N RKYN
Sbjct: 1268 EMLEKIKEECRSGTGGHEYCSGDGHDCTDNDRKYN 1302
>M.Javanica_Scaff19g000486 on XP_001347691 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2182
Score = 24.6 bits (52), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 45 EKYSKEFVIINS--NYYNTGKIDTNAEINIINARAAGIENVDIY 86
E+YS ++NS + +GK D + I++IN +G E +DIY
Sbjct: 1953 EEYSYNVNMVNSMNDIPMSGKNDVYSGIDLINDSLSGGEPIDIY 1996
>M.Javanica_Scaff19g000486 on XP_827747 VSG (Establishment) [Trypanosoma brucei]
Length = 509
Score = 24.3 bits (51), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 9/82 (10%)
Query: 31 WETMYR--VSSFKCL------KEKYSKEFVIINSNYYNTGKIDTNAEINIINARAAGIEN 82
WET ++ V+ K K Y+ + V SN+ K+DT+ + AG
Sbjct: 172 WETNHKAHVTGLKAAVTTLLNKAAYNVDPVPAQSNHKCNVKVDTSRQ-KTCELPKAGEAI 230
Query: 83 VDIYFSPCVKPSSASELICGDA 104
C K S+ S+ ICGD+
Sbjct: 231 CGALVCICAKGSTQSKDICGDS 252
>M.Javanica_Scaff19g000486 on XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2178
Score = 24.3 bits (51), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 61 TGKIDTNAEINIINARAAGIENVDIY 86
+GK D + I++IN +G NVDIY
Sbjct: 1913 SGKNDVYSGIDLINDTLSGNHNVDIY 1938
>M.Javanica_Scaff19g000486 on XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2264
Score = 24.3 bits (51), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 12/60 (20%)
Query: 61 TGKIDTNAEINIINARAAGIENVDIYFSPCVKPSSASELICGDARESIIFVLDHLNKNNA 120
+GK D+ + I++IN +G + +DIY EL+ +E+ +F +H KN +
Sbjct: 2062 SGKHDSYSGIDLINDALSGNQPIDIY----------DELL--KRKENELFGTNHTKKNTS 2109
>M.Javanica_Scaff19g000486 on XP_821910 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 853
Score = 24.3 bits (51), Expect = 8.4, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 62 GKIDTNAEINIINARAAGIENVDIYFSPCVKPSSASELICGD 103
G+ + I ++ A+ AG+EN + +L+CGD
Sbjct: 602 GEPKGDTPIPLLGAKMAGVENNPVLLGLSYNGGGKWQLLCGD 643
>M.Javanica_Scaff19g000486 on XP_001351319 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2646
Score = 24.3 bits (51), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 19/26 (73%)
Query: 61 TGKIDTNAEINIINARAAGIENVDIY 86
+GK D+ + I++IN +G +++DIY
Sbjct: 2450 SGKHDSYSGIDLINDTLSGNQHIDIY 2475
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff17338g076489
(227 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001611205 variant erythrocyte surface antigen-1, beta subuni... 27 1.4
XP_803096 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.5
XP_804689 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.7
XP_808589 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.0
XP_806338 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.9
XP_812043 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.6
AAA29462 ABRA (Others) [Plasmodium falciparum] 25 3.8
>M.Javanica_Scaff17338g076489 on XP_001611205 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1146
Score = 26.6 bits (57), Expect = 1.4, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 43/116 (37%), Gaps = 29/116 (25%)
Query: 111 PGRRLRKNVANVRKHIDYVANVLNHVEGRLWQHSRFNRTVTQPDILYQNYVLPPASMPDI 170
P L + N+++ ID+V V + + N P LPP S P +
Sbjct: 7 PYTSLTQAPTNLKEAIDWVLRVTG-------KDGKKNMATKSP--------LPPGSSPQL 51
Query: 171 PVDCVLTKFVRSAMNKVKCPVYSLCWTPEGKRLITGASSGEFTLWNGTAFNFETIL 226
C L K ++ + + P +P G SSG + W+G E+ +
Sbjct: 52 GCLCFLAKAIKDLLYDARSPE-----SP-------GPSSGRY--WDGMLLTEESAI 93
>M.Javanica_Scaff17338g076489 on XP_803096 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 753
Score = 26.6 bits (57), Expect = 1.5, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 24/53 (45%)
Query: 48 FQQRASTSMEAPPAESSPVIKSIDPQDESPLKFDFSSTQPTQSKQAFRFKAAT 100
F AS ++E P+E +P++ + + SPL T + F+ K T
Sbjct: 557 FTLVASVTIEEAPSEDAPLLGAALGETNSPLTMGILYTADKEWATIFKSKKTT 609
>M.Javanica_Scaff17338g076489 on XP_804689 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 213
Score = 25.8 bits (55), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 24/53 (45%)
Query: 48 FQQRASTSMEAPPAESSPVIKSIDPQDESPLKFDFSSTQPTQSKQAFRFKAAT 100
F AS ++E P+E +P++ + + SPL T + F+ K T
Sbjct: 26 FTLVASVTIEEAPSEDAPLLGAALGETNSPLTMGILYTADKEWATIFKSKKTT 78
>M.Javanica_Scaff17338g076489 on XP_808589 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 853
Score = 26.2 bits (56), Expect = 2.0, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 4/83 (4%)
Query: 3 ATFSNPHMHQQAFQQRASTSMEVQILSYCFDMLATFSNPHMHQQAFQQRASTSMEAPPAE 62
AT +N + FQ S + +++ D L S H F AS ++E P+E
Sbjct: 537 ATVTNATKVKDGFQLTEPDSGVMWPVNFPDDNLRHVSLSH----NFTLVASVTIEEAPSE 592
Query: 63 SSPVIKSIDPQDESPLKFDFSST 85
+P++ ++ ESP S T
Sbjct: 593 KTPLLAAVLGDAESPYIMRLSYT 615
>M.Javanica_Scaff17338g076489 on XP_806338 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 652
Score = 25.4 bits (54), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/53 (24%), Positives = 25/53 (47%)
Query: 48 FQQRASTSMEAPPAESSPVIKSIDPQDESPLKFDFSSTQPTQSKQAFRFKAAT 100
F AS ++E P+E +P++ ++ + SP T + F++K T
Sbjct: 575 FTLVASVTIEKAPSEDAPLLGAMWGDNNSPHTMGILYTADKEWVTMFKYKKTT 627
>M.Javanica_Scaff17338g076489 on XP_812043 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 807
Score = 25.4 bits (54), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 13/53 (24%), Positives = 25/53 (47%)
Query: 48 FQQRASTSMEAPPAESSPVIKSIDPQDESPLKFDFSSTQPTQSKQAFRFKAAT 100
F AS ++E P+E +P++ ++ + SP T + F++K T
Sbjct: 574 FTLVASVTIEKAPSEDAPLLGAMWGDNNSPHTMGILYTADKEWVTMFKYKKTT 626
>M.Javanica_Scaff17338g076489 on AAA29462 ABRA (Others) [Plasmodium falciparum]
Length = 743
Score = 25.4 bits (54), Expect = 3.8, Method: Composition-based stats.
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 49 QQRASTSMEAPPAESSPVIKSIDPQDES 76
Q + SME P ++ P ++ ++P ++S
Sbjct: 461 QAVDTKSMEEPKVKAQPALRGVEPTEDS 488
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1900g019184
(201 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_810068 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.1
XP_813587 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.3
XP_805038 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.4
XP_827715 VSG (Establishment) [Trypanosoma brucei] 26 1.5
XP_805084 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.9
XP_820135 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.1
XP_001349032 PfEMP1 (Establishment) [Plasmodium falciparum] 25 3.3
XP_001351563 PfEMP1 (Establishment) [Plasmodium falciparum] 24 8.6
>M.Javanica_Scaff1900g019184 on XP_810068 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1147
Score = 26.6 bits (57), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 40 SGPSSSSSAGSGVGESGAGASTAGN 64
+ PSS+ +AGS V E A +AGN
Sbjct: 869 AAPSSTDAAGSSVPEPATAAESAGN 893
>M.Javanica_Scaff1900g019184 on XP_813587 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 751
Score = 26.6 bits (57), Expect = 1.3, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 43 SSSSSAGSGVGESGAGASTA-GNLQRSPGTSNSSRVRNIGASSS 85
+++SSA G + A A+++ G+ + TS+S+ + ++GASSS
Sbjct: 613 AATSSAREGTADQPASATSSDGHEAVTSVTSSSAAITDVGASSS 656
>M.Javanica_Scaff1900g019184 on XP_805038 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 927
Score = 26.6 bits (57), Expect = 1.4, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 43 SSSSSAGSGVGESGAGASTA-GNLQRSPGTSNSSRVRNIGASSS 85
+++SSA G + A A+++ G+ + TS+S+ + ++GASSS
Sbjct: 789 AATSSAREGTADQPASATSSDGHEAVTSVTSSSAAITDVGASSS 832
>M.Javanica_Scaff1900g019184 on XP_827715 VSG (Establishment) [Trypanosoma brucei]
Length = 473
Score = 26.2 bits (56), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 12/56 (21%)
Query: 70 GTSNSSRVRNIGASSSTGDGTSII------------ELIERKNVLEKLIRDYSSKS 113
G SS V N GA + G G ++ L+E +N +E L++D +KS
Sbjct: 294 GKKQSSEVNNCGAGTGRGQGICVLYKGHGEELPWMKALVEVENEMEVLLQDKHNKS 349
>M.Javanica_Scaff1900g019184 on XP_805084 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 828
Score = 25.4 bits (54), Expect = 2.9, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 6/67 (8%)
Query: 28 GRGGRRAHRGGRSGPS------SSSSAGSGVGESGAGASTAGNLQRSPGTSNSSRVRNIG 81
G G + +G +G S S +AG+ + + A S+AG S G + + +
Sbjct: 700 GAAGTDSAKGKATGSSAEEDSESWGAAGTDLAKGKATGSSAGEDSESSGAAGTDLAKGKA 759
Query: 82 ASSSTGD 88
SS G+
Sbjct: 760 TGSSAGE 766
>M.Javanica_Scaff1900g019184 on XP_820135 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1519
Score = 25.4 bits (54), Expect = 3.1, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 43 SSSSSAGSGV-GESGAGASTAGNLQRSPGTSNSSRVRNIGASSS 85
+++SSA G G+ + S+ G+ + TS+S + ++GASSS
Sbjct: 1415 AATSSAREGTAGQPASATSSDGHEAVTSVTSSSVAITDVGASSS 1458
>M.Javanica_Scaff1900g019184 on XP_001349032 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2267
Score = 25.4 bits (54), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 8/63 (12%)
Query: 141 KYEKILEEALLNEVDSKRTLKKEKNKMINDGSAVNKIMEYCNNY--------VLAVLNEI 192
KY K +E+ + ++ K E K+ ND + N EYC LA L
Sbjct: 1305 KYRKWIEKKVEEFHKQEKKYKGEHGKLRNDNCSGNDNKEYCEQIKQKTSAADFLAALKHC 1364
Query: 193 KNN 195
KN+
Sbjct: 1365 KND 1367
>M.Javanica_Scaff1900g019184 on XP_001351563 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2149
Score = 23.9 bits (50), Expect = 8.6, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 20/38 (52%)
Query: 42 PSSSSSAGSGVGESGAGASTAGNLQRSPGTSNSSRVRN 79
PS +++ SG + +G + +GN + G + S +N
Sbjct: 1789 PSGNNTTASGKNTTASGKTQSGNNTTASGKNTPSDTQN 1826
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff17580g076995
(57 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001610720 variant erythrocyte surface antigen-1, beta subuni... 24 0.50
XP_001611366 variant erythrocyte surface antigen-1, beta subuni... 23 1.7
XP_803151 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.8
XP_001608784 variant erythrocyte surface antigen-1, beta subuni... 22 4.6
>M.Javanica_Scaff17580g076995 on XP_001610720 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1102
Score = 24.3 bits (51), Expect = 0.50, Method: Composition-based stats.
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 33 CCGSNPTCCSPGAE 46
C GS CCSPG +
Sbjct: 165 CNGSGVNCCSPGGK 178
>M.Javanica_Scaff17580g076995 on XP_001611366 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1173
Score = 22.7 bits (47), Expect = 1.7, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 10/21 (47%)
Query: 28 AIGGICCGSNPTCCSPGAESG 48
IG C TCCSPG +
Sbjct: 154 GIGKECKCVGGTCCSPGGSAA 174
>M.Javanica_Scaff17580g076995 on XP_803151 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 755
Score = 22.7 bits (47), Expect = 1.8, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 17 IVFAKSFDEQLAIGGICCGSNPTCCSPGAESG 48
++ S++ + +CC NP S G E+G
Sbjct: 492 VLLGLSYNSEKKWHVLCCDGNPEELSSGWETG 523
>M.Javanica_Scaff17580g076995 on XP_001608784 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 329
Score = 21.6 bits (44), Expect = 4.6, Method: Composition-based stats.
Identities = 7/13 (53%), Positives = 7/13 (53%)
Query: 33 CCGSNPTCCSPGA 45
C G TCCS G
Sbjct: 164 CSGGGGTCCSAGG 176
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2250g021669
(297 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAX07967 alpha-10 giardin (Others) [Giardia duodenalis] 27 1.3
>M.Javanica_Scaff2250g021669 on AAX07967 alpha-10 giardin (Others) [Giardia duodenalis]
Length = 255
Score = 26.9 bits (58), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Query: 16 SWTWEDYPSPRGQNYSEC--GVTNPTWVCD 43
S WE YP + QN + G NP +CD
Sbjct: 100 SMAWEPYPEMKAQNLTTLMKGGKNPKAICD 129
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff21251g084135
(141 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAK31247 variable surface protein IVe (Establishment) [Giardi... 28 0.15
AAK31248 variable surface protein IVf (Establishment) [Giardi... 27 0.22
AAK31227 variable surface protein 14a (Establishment) [Giardi... 25 1.6
AAK31245 variable surface protein IVc (Establishment) [Giardi... 25 1.6
AAK31229 variable surface protein 14c (Establishment) [Giardi... 25 1.6
AAK31231 variable surface protein 14e (Establishment) [Giardi... 25 1.6
XP_001611442 variant erythrocyte surface antigen-1, alpha subun... 25 3.0
>M.Javanica_Scaff21251g084135 on AAK31247 variable surface protein IVe (Establishment) [Giardia
duodenalis]
Length = 130
Score = 27.7 bits (60), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 102 CGNCQGKDSKDCYACKENYCNEEKHVYKHCWENNGKI 138
C +C G D+K C C Y + V + C E +G I
Sbjct: 27 CASCTGTDTKTCTKCLSGYYLDSGSVCRKCSEISGDI 63
>M.Javanica_Scaff21251g084135 on AAK31248 variable surface protein IVf (Establishment) [Giardia
duodenalis]
Length = 166
Score = 27.3 bits (59), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 102 CGNCQGKDSKDCYACKENYCNEEKHVYKHCWENNGKI 138
C +C G D+K C C Y + V + C E +G I
Sbjct: 63 CASCTGTDTKTCTKCLSGYYLDSGSVCRKCSEISGDI 99
>M.Javanica_Scaff21251g084135 on AAK31227 variable surface protein 14a (Establishment) [Giardia
duodenalis]
Length = 157
Score = 25.0 bits (53), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 102 CGNCQGKDSKDCYACKENYCNEEKHVYKHCWENNGKI 138
C +C G SK C C Y + + K C E +G I
Sbjct: 56 CASCTGTSSKTCTKCFSGYYLDSANACKKCSETSGTI 92
>M.Javanica_Scaff21251g084135 on AAK31245 variable surface protein IVc (Establishment) [Giardia
duodenalis]
Length = 157
Score = 25.0 bits (53), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 102 CGNCQGKDSKDCYACKENYCNEEKHVYKHCWENNGKI 138
C +C G SK C C Y + + K C E +G I
Sbjct: 56 CASCTGTSSKTCTKCFSGYYLDSANACKKCSETSGTI 92
>M.Javanica_Scaff21251g084135 on AAK31229 variable surface protein 14c (Establishment) [Giardia
duodenalis]
Length = 158
Score = 25.0 bits (53), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 102 CGNCQGKDSKDCYACKENYCNEEKHVYKHCWENNGKI 138
C +C G SK C C Y + + K C E +G I
Sbjct: 57 CASCTGTSSKTCTKCFSGYYLDSANACKKCSETSGTI 93
>M.Javanica_Scaff21251g084135 on AAK31231 variable surface protein 14e (Establishment) [Giardia
duodenalis]
Length = 157
Score = 24.6 bits (52), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 102 CGNCQGKDSKDCYACKENYCNEEKHVYKHCWENNGKI 138
C +C G SK C C Y + + K C E +G I
Sbjct: 56 CASCTGTSSKTCTKCFSGYYLDSANACKKCSETSGTI 92
>M.Javanica_Scaff21251g084135 on XP_001611442 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1350
Score = 24.6 bits (52), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 87 ECFVFRDSDGKVEQGCGNCQGKDSKDC 113
EC +F D+ + +GC C+G DC
Sbjct: 210 ECKIFDDNGHHLGRGCTRCKGSGGSDC 236
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1928g019398
(311 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349032 PfEMP1 (Establishment) [Plasmodium falciparum] 28 1.1
XP_001351221 CTRP (Adhesin) [Plasmodium falciparum] 27 1.6
>M.Javanica_Scaff1928g019398 on XP_001349032 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2267
Score = 27.7 bits (60), Expect = 1.1, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 242 QQSPRFLEKPSTTTTPPPTFAPEQQQRPQFQP 273
++ P E P P P P+ ++RP+ QP
Sbjct: 1723 EELPSAPEPPQDKALPKPAAQPKDKKRPKRQP 1754
>M.Javanica_Scaff1928g019398 on XP_001351221 CTRP (Adhesin) [Plasmodium falciparum]
Length = 2112
Score = 26.9 bits (58), Expect = 1.6, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
Query: 236 PGPGFRQQSPRFLEKPSTTTTPPPTFAPEQQQRP 269
P P +++P +EKP+ P P PE ++ P
Sbjct: 524 PTP---EENPNPVEKPTPEENPNPVEKPEPEKNP 554
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff19340g080587
(216 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff21750g084998
(56 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_845638 VSG (Establishment) [Trypanosoma brucei] 24 0.39
XP_816751 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 0.74
XP_815234 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 0.99
XP_812850 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 0.99
XP_810676 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.6
XP_805135 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 3.1
XP_804106 Trans-sialidase (Invasion) [Trypanosoma cruzi] 21 6.6
XP_001351437 PfEMP1 (Establishment) [Plasmodium falciparum] 21 7.1
>M.Javanica_Scaff21750g084998 on XP_845638 VSG (Establishment) [Trypanosoma brucei]
Length = 510
Score = 24.3 bits (51), Expect = 0.39, Method: Composition-based stats.
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 7 WLFWLSISSSLANSEK 22
WL W I+ SLAN +K
Sbjct: 108 WLAWQHIAHSLANKDK 123
>M.Javanica_Scaff21750g084998 on XP_816751 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1042
Score = 23.5 bits (49), Expect = 0.74, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 5 LLWLFWLSISSSLANSEKQGYDKDSIVVGYGDHFVQLENKTVI 47
LL L + SS A +K G ++ I+ G+ F EN+ ++
Sbjct: 49 LLLLVVMMSCSSEATYDKDGNSRNGIIFEGGNSFSDAENELLV 91
>M.Javanica_Scaff21750g084998 on XP_815234 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1032
Score = 23.1 bits (48), Expect = 0.99, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 5 LLWLFWLSISSSLANSEKQGYDKDSIVVGYGDHFVQLENKTVI 47
+L L L+ SS A K+G ++ + G+ F ENK ++
Sbjct: 48 VLLLVVLTSCSSEATYGKEGNSRNGTIFEGGNSFSDAENKLLV 90
>M.Javanica_Scaff21750g084998 on XP_812850 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1032
Score = 23.1 bits (48), Expect = 0.99, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 5 LLWLFWLSISSSLANSEKQGYDKDSIVVGYGDHFVQLENKTVI 47
+L L L+ SS A K+G ++ + G+ F ENK ++
Sbjct: 48 VLLLVVLTSCSSEATYGKEGNSRNGTIFEGGNSFSDAENKLLV 90
>M.Javanica_Scaff21750g084998 on XP_810676 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1040
Score = 22.7 bits (47), Expect = 1.6, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 5 LLWLFWLSISSSLANSEKQGYDKDSIVVGYGDHFVQLENKTVI 47
LL + + SS A K+G ++ I+ G+ F ENK ++
Sbjct: 49 LLLVVVMMSCSSEATYGKEGNSRNGIIFEGGNSFSDEENKLLV 91
>M.Javanica_Scaff21750g084998 on XP_805135 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 553
Score = 21.9 bits (45), Expect = 3.1, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 5 LLWLFWLSISSSLANSEKQGYDKDSIVVGYGDHFVQLENKTVI 47
LL + ++ SS A K+G ++ I+ GD F E + ++
Sbjct: 49 LLLVVVMTSCSSEATYGKEGNSRNGIIFEGGDSFSDPETENLL 91
>M.Javanica_Scaff21750g084998 on XP_804106 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1006
Score = 20.8 bits (42), Expect = 6.6, Method: Composition-based stats.
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 13 ISSSLANSEKQGYDKDSIVVGYG 35
+S + E+ GY+ +++V GYG
Sbjct: 121 LSPTTIVDEEDGYEINALVGGYG 143
>M.Javanica_Scaff21750g084998 on XP_001351437 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2277
Score = 20.8 bits (42), Expect = 7.1, Method: Composition-based stats.
Identities = 7/28 (25%), Positives = 16/28 (57%)
Query: 1 MFFCLLWLFWLSISSSLANSEKQGYDKD 28
++ C ++ W++ + +KQ YDK+
Sbjct: 390 LYACNPYVDWINNQKEQFDKQKQKYDKE 417
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2200g021329
(348 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609315 variant erythrocyte surface antigen-1, alpha subun... 27 1.7
>M.Javanica_Scaff2200g021329 on XP_001609315 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1338
Score = 27.3 bits (59), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 35/91 (38%), Gaps = 4/91 (4%)
Query: 241 FFQILGSTMHYNNMAFSKNKKPTIETLDKNYQHTIGYRLKLSFLDTKALNHRYCDHICDD 300
Q+L + + ++ + + K + YQH G + + +L N D C
Sbjct: 119 LAQVLSALVGWSRIEKCWDSKGKCKVGTHGYQH--GIKKECEYLKDVTPNDPCKD--CGC 174
Query: 301 LTWITPDCRNNGYPNPNKCSECLCPEATFKK 331
+ W + N G P KC+ C E KK
Sbjct: 175 MKWKVDNADNEGTPLGRKCTRCSGSEEEVKK 205
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff18216g078305
(196 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAW78166 TRAP (Invasion) [Plasmodium falciparum] 26 1.3
AAW78177 TRAP (Invasion) [Plasmodium falciparum] 26 1.5
AAW78159 TRAP (Invasion) [Plasmodium falciparum] 26 1.5
AAW78176 TRAP (Invasion) [Plasmodium falciparum] 26 1.5
AAW78164 TRAP (Invasion) [Plasmodium falciparum] 26 1.6
AAW78138 TRAP (Invasion) [Plasmodium falciparum] 26 1.8
AAW78152 TRAP (Invasion) [Plasmodium falciparum] 26 1.8
AAW78163 TRAP (Invasion) [Plasmodium falciparum] 26 1.8
AAW78136 TRAP (Invasion) [Plasmodium falciparum] 25 2.3
AAW78162 TRAP (Invasion) [Plasmodium falciparum] 25 2.4
AAW78150 TRAP (Invasion) [Plasmodium falciparum] 25 2.4
AAW78135 TRAP (Invasion) [Plasmodium falciparum] 25 2.5
AAW78141 TRAP (Invasion) [Plasmodium falciparum] 25 2.5
AAW78161 TRAP (Invasion) [Plasmodium falciparum] 25 2.6
AAW78158 TRAP (Invasion) [Plasmodium falciparum] 25 2.6
AAW78132 TRAP (Invasion) [Plasmodium falciparum] 25 2.6
AAW78148 TRAP (Invasion) [Plasmodium falciparum] 25 2.9
AAW78165 TRAP (Invasion) [Plasmodium falciparum] 25 3.0
AAA29778 TRAP (Invasion) [Plasmodium falciparum] 25 3.0
AAW78160 TRAP (Invasion) [Plasmodium falciparum] 25 3.1
AAW78151 TRAP (Invasion) [Plasmodium falciparum] 25 3.3
AAW78175 TRAP (Invasion) [Plasmodium falciparum] 25 3.5
AAW78144 TRAP (Invasion) [Plasmodium falciparum] 25 3.6
AAW78133 TRAP (Invasion) [Plasmodium falciparum] 25 3.7
AAW78173 TRAP (Invasion) [Plasmodium falciparum] 25 3.9
AAW78139 TRAP (Invasion) [Plasmodium falciparum] 25 3.9
AAA29775 TRAP (Invasion) [Plasmodium falciparum] 25 3.9
AAA29772 TRAP (Invasion) [Plasmodium falciparum] 25 4.1
AAW78174 TRAP (Invasion) [Plasmodium falciparum] 25 4.2
CAB92983 SBP1 (Others) [Plasmodium falciparum] 24 5.1
AAW78167 TRAP (Invasion) [Plasmodium falciparum] 24 5.4
AAW78153 TRAP (Invasion) [Plasmodium falciparum] 24 5.6
AAW78149 TRAP (Invasion) [Plasmodium falciparum] 24 5.7
AAW78137 TRAP (Invasion) [Plasmodium falciparum] 24 5.9
AAW78156 TRAP (Invasion) [Plasmodium falciparum] 24 6.0
AAW78154 TRAP (Invasion) [Plasmodium falciparum] 24 6.1
AAW78172 TRAP (Invasion) [Plasmodium falciparum] 24 6.5
AAW78171 TRAP (Invasion) [Plasmodium falciparum] 24 6.9
AAW78134 TRAP (Invasion) [Plasmodium falciparum] 24 7.0
AAW78130 TRAP (Invasion) [Plasmodium falciparum] 24 7.0
AAA29774 TRAP (Invasion) [Plasmodium falciparum] 24 7.3
AAA29770 TRAP (Invasion) [Plasmodium falciparum] 24 7.3
AAA29771 TRAP (Invasion) [Plasmodium falciparum] 24 7.3
AAW78146 TRAP (Invasion) [Plasmodium falciparum] 24 7.4
AAW78169 TRAP (Invasion) [Plasmodium falciparum] 24 7.4
AAQ11894 TRAP (Invasion) [Plasmodium falciparum] 24 7.4
AAQ11891 TRAP (Invasion) [Plasmodium falciparum] 24 7.5
AAQ11892 TRAP (Invasion) [Plasmodium falciparum] 24 7.7
AAQ11895 TRAP (Invasion) [Plasmodium falciparum] 24 7.7
AAA29777 TRAP (Invasion) [Plasmodium falciparum] 24 7.7
AAA29776 TRAP (Invasion) [Plasmodium falciparum] 24 7.9
AAW78131 TRAP (Invasion) [Plasmodium falciparum] 24 8.4
>M.Javanica_Scaff18216g078305 on AAW78166 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 26.2 bits (56), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 43/95 (45%), Gaps = 18/95 (18%)
Query: 46 NTLEDD-KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDY 104
N+++D KE + D+ V A+FG+ ++ FN+ + P D +
Sbjct: 166 NSIQDSLKESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGK-------------- 211
Query: 105 CKIFLDGAY--LRCMCHP-VKECCMYIENTLMAAV 136
C ++ D A+ ++ + P +K C+ +E T V
Sbjct: 212 CNLYADSAWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on AAW78177 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 26.2 bits (56), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 43/95 (45%), Gaps = 18/95 (18%)
Query: 46 NTLEDD-KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDY 104
N+++D KE + D+ V A+FG+ ++ FN+ + P D +
Sbjct: 166 NSIQDSLKESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGK-------------- 211
Query: 105 CKIFLDGAY--LRCMCHP-VKECCMYIENTLMAAV 136
C ++ D A+ ++ + P +K C+ +E T V
Sbjct: 212 CNLYADSAWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on AAW78159 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 26.2 bits (56), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 43/95 (45%), Gaps = 18/95 (18%)
Query: 46 NTLEDD-KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDY 104
N+++D KE + D+ V A+FG+ ++ FN+ + P D +
Sbjct: 166 NSIQDSLKESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGK-------------- 211
Query: 105 CKIFLDGAY--LRCMCHP-VKECCMYIENTLMAAV 136
C ++ D A+ ++ + P +K C+ +E T V
Sbjct: 212 CNLYADSAWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on AAW78176 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 26.2 bits (56), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 43/95 (45%), Gaps = 18/95 (18%)
Query: 46 NTLEDD-KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDY 104
N+++D KE + D+ V A+FG+ ++ FN+ + P D +
Sbjct: 166 NSIQDSLKESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGK-------------- 211
Query: 105 CKIFLDGAY--LRCMCHP-VKECCMYIENTLMAAV 136
C ++ D A+ ++ + P +K C+ +E T V
Sbjct: 212 CNLYADSAWENVKNVIGPFMKAVCVEVEKTANCGV 246
>M.Javanica_Scaff18216g078305 on AAW78164 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 26.2 bits (56), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 43/95 (45%), Gaps = 18/95 (18%)
Query: 46 NTLEDD-KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDY 104
N+++D KE + D+ V A+FG+ ++ FN+ + P D +
Sbjct: 166 NSIQDSLKESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGK-------------- 211
Query: 105 CKIFLDGAY--LRCMCHP-VKECCMYIENTLMAAV 136
C ++ D A+ ++ + P +K C+ +E T V
Sbjct: 212 CNLYADSAWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on AAW78138 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 25.8 bits (55), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 18/95 (18%)
Query: 46 NTLEDD-KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDY 104
N+++D KE + D V A+FG+ ++ FN+ + P D +
Sbjct: 166 NSIQDSLKESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGK-------------- 211
Query: 105 CKIFLDGAY--LRCMCHP-VKECCMYIENTLMAAV 136
C ++ D A+ ++ + P +K C+ +E T V
Sbjct: 212 CNLYADSAWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on AAW78152 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 25.8 bits (55), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 18/95 (18%)
Query: 46 NTLEDD-KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDY 104
N+++D KE + D V A+FG+ ++ FN+ + P D +
Sbjct: 166 NSIQDSLKESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGK-------------- 211
Query: 105 CKIFLDGAY--LRCMCHP-VKECCMYIENTLMAAV 136
C ++ D A+ ++ + P +K C+ +E T V
Sbjct: 212 CNLYADSAWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on AAW78163 TRAP (Invasion) [Plasmodium falciparum]
Length = 565
Score = 25.8 bits (55), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 18/95 (18%)
Query: 46 NTLEDD-KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDY 104
N+++D KE + D V A+FG+ ++ FN+ + P D +
Sbjct: 166 NSIQDSLKESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGK-------------- 211
Query: 105 CKIFLDGAY--LRCMCHP-VKECCMYIENTLMAAV 136
C ++ D A+ ++ + P +K C+ +E T V
Sbjct: 212 CNLYADSAWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on AAW78136 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 25.4 bits (54), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 17/88 (19%)
Query: 52 KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDYCKIFLDG 111
KE + D+ V A+FG+ ++ FN+ + P D + C ++ D
Sbjct: 173 KESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGK--------------CNLYADS 218
Query: 112 AY--LRCMCHP-VKECCMYIENTLMAAV 136
A+ ++ + P +K C+ +E T V
Sbjct: 219 AWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on AAW78162 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 25.4 bits (54), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 17/88 (19%)
Query: 52 KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDYCKIFLDG 111
KE + D+ V A+FG+ ++ FN+ + P D + C ++ D
Sbjct: 173 KESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGK--------------CNLYADS 218
Query: 112 AY--LRCMCHP-VKECCMYIENTLMAAV 136
A+ ++ + P +K C+ +E T V
Sbjct: 219 AWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on AAW78150 TRAP (Invasion) [Plasmodium falciparum]
Length = 569
Score = 25.4 bits (54), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 17/88 (19%)
Query: 52 KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDYCKIFLDG 111
KE + D+ V A+FG+ ++ FN+ + P D + C ++ D
Sbjct: 173 KESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGK--------------CNLYADS 218
Query: 112 AY--LRCMCHP-VKECCMYIENTLMAAV 136
A+ ++ + P +K C+ +E T V
Sbjct: 219 AWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on AAW78135 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 25.4 bits (54), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 17/88 (19%)
Query: 52 KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDYCKIFLDG 111
KE + D+ V A+FG+ ++ FN+ + P D + C ++ D
Sbjct: 173 KESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGK--------------CNLYADS 218
Query: 112 AY--LRCMCHP-VKECCMYIENTLMAAV 136
A+ ++ + P +K C+ +E T V
Sbjct: 219 AWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on AAW78141 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 25.4 bits (54), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 17/88 (19%)
Query: 52 KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDYCKIFLDG 111
KE + D+ V A+FG+ ++ FN+ + P D + C ++ D
Sbjct: 173 KESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGK--------------CNLYADS 218
Query: 112 AY--LRCMCHP-VKECCMYIENTLMAAV 136
A+ ++ + P +K C+ +E T V
Sbjct: 219 AWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on AAW78161 TRAP (Invasion) [Plasmodium falciparum]
Length = 554
Score = 25.4 bits (54), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 17/88 (19%)
Query: 52 KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDYCKIFLDG 111
KE + D+ V A+FG+ ++ FN+ + P D + C ++ D
Sbjct: 173 KESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGK--------------CNLYADS 218
Query: 112 AY--LRCMCHP-VKECCMYIENTLMAAV 136
A+ ++ + P +K C+ +E T V
Sbjct: 219 AWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on AAW78158 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 25.4 bits (54), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 17/88 (19%)
Query: 52 KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDYCKIFLDG 111
KE + D+ V A+FG+ ++ FN+ + P D + C ++ D
Sbjct: 173 KESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGK--------------CNLYADS 218
Query: 112 AY--LRCMCHP-VKECCMYIENTLMAAV 136
A+ ++ + P +K C+ +E T V
Sbjct: 219 AWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on AAW78132 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 25.4 bits (54), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 17/88 (19%)
Query: 52 KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDYCKIFLDG 111
KE + D+ V A+FG+ ++ FN+ + P D + C ++ D
Sbjct: 173 KESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGK--------------CNLYADS 218
Query: 112 AY--LRCMCHP-VKECCMYIENTLMAAV 136
A+ ++ + P +K C+ +E T V
Sbjct: 219 AWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on AAW78148 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 25.4 bits (54), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 17/88 (19%)
Query: 52 KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDYCKIFLDG 111
KE + D+ V A+FG+ ++ FN+ + P D + C ++ D
Sbjct: 173 KESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGK--------------CNLYADS 218
Query: 112 AY--LRCMCHP-VKECCMYIENTLMAAV 136
A+ ++ + P +K C+ +E T V
Sbjct: 219 AWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on AAW78165 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 25.0 bits (53), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 17/88 (19%)
Query: 52 KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDYCKIFLDG 111
KE + D+ V A+FG+ ++ FN+ + P D + C ++ D
Sbjct: 173 KESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGK--------------CNLYADS 218
Query: 112 AY--LRCMCHP-VKECCMYIENTLMAAV 136
A+ ++ + P +K C+ +E T V
Sbjct: 219 AWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on AAA29778 TRAP (Invasion) [Plasmodium falciparum]
Length = 562
Score = 25.0 bits (53), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 17/88 (19%)
Query: 52 KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDYCKIFLDG 111
KE + D+ V A+FG+ ++ FN+ + P D + C ++ D
Sbjct: 173 KESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGK--------------CNLYADS 218
Query: 112 AY--LRCMCHP-VKECCMYIENTLMAAV 136
A+ ++ + P +K C+ +E T V
Sbjct: 219 AWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on AAW78160 TRAP (Invasion) [Plasmodium falciparum]
Length = 557
Score = 25.0 bits (53), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 17/88 (19%)
Query: 52 KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDYCKIFLDG 111
KE + D+ V A+FG+ ++ FN+ + P D + C ++ D
Sbjct: 173 KESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGK--------------CNLYADS 218
Query: 112 AY--LRCMCHP-VKECCMYIENTLMAAV 136
A+ ++ + P +K C+ +E T V
Sbjct: 219 AWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on AAW78151 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 25.0 bits (53), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 17/88 (19%)
Query: 52 KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDYCKIFLDG 111
KE + D V A+FG+ ++ FN+ + P D + C ++ D
Sbjct: 173 KESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGK--------------CNLYADS 218
Query: 112 AY--LRCMCHP-VKECCMYIENTLMAAV 136
A+ ++ + P +K C+ +E T V
Sbjct: 219 AWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on AAW78175 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 25.0 bits (53), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 17/88 (19%)
Query: 52 KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDYCKIFLDG 111
KE + D V A+FG+ ++ FN+ + P D + C ++ D
Sbjct: 173 KESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGK--------------CNLYADS 218
Query: 112 AY--LRCMCHP-VKECCMYIENTLMAAV 136
A+ ++ + P +K C+ +E T V
Sbjct: 219 AWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on AAW78144 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 25.0 bits (53), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 17/88 (19%)
Query: 52 KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDYCKIFLDG 111
KE + D V A+FG+ ++ FN+ + P D + C ++ D
Sbjct: 173 KESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGK--------------CNLYADS 218
Query: 112 AY--LRCMCHP-VKECCMYIENTLMAAV 136
A+ ++ + P +K C+ +E T V
Sbjct: 219 AWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on AAW78133 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 25.0 bits (53), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 17/88 (19%)
Query: 52 KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDYCKIFLDG 111
KE + D V A+FG+ ++ FN+ + P D + C ++ D
Sbjct: 173 KESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGK--------------CNLYADS 218
Query: 112 AY--LRCMCHP-VKECCMYIENTLMAAV 136
A+ ++ + P +K C+ +E T V
Sbjct: 219 AWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on AAW78173 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 25.0 bits (53), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 17/88 (19%)
Query: 52 KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDYCKIFLDG 111
KE + D V A+FG+ ++ FN+ + P D + C ++ D
Sbjct: 173 KESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGK--------------CNLYADS 218
Query: 112 AY--LRCMCHP-VKECCMYIENTLMAAV 136
A+ ++ + P +K C+ +E T V
Sbjct: 219 AWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on AAW78139 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 24.6 bits (52), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 17/88 (19%)
Query: 52 KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDYCKIFLDG 111
KE + D V A+FG+ ++ FN+ + P D + C ++ D
Sbjct: 173 KESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGK--------------CNLYADS 218
Query: 112 AY--LRCMCHP-VKECCMYIENTLMAAV 136
A+ ++ + P +K C+ +E T V
Sbjct: 219 AWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on AAA29775 TRAP (Invasion) [Plasmodium falciparum]
Length = 574
Score = 24.6 bits (52), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 17/88 (19%)
Query: 52 KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDYCKIFLDG 111
KE + D V A+FG+ ++ FN+ + P D + C ++ D
Sbjct: 173 KESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGK--------------CNLYADS 218
Query: 112 AY--LRCMCHP-VKECCMYIENTLMAAV 136
A+ ++ + P +K C+ +E T V
Sbjct: 219 AWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on AAA29772 TRAP (Invasion) [Plasmodium falciparum]
Length = 565
Score = 24.6 bits (52), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 17/88 (19%)
Query: 52 KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDYCKIFLDG 111
KE + D V A+FG+ ++ FN+ + P D + C ++ D
Sbjct: 173 KESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGK--------------CNLYADS 218
Query: 112 AY--LRCMCHP-VKECCMYIENTLMAAV 136
A+ ++ + P +K C+ +E T V
Sbjct: 219 AWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on AAW78174 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 24.6 bits (52), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 17/88 (19%)
Query: 52 KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDYCKIFLDG 111
KE + D V A+FG+ ++ FN+ + P D + C ++ D
Sbjct: 173 KESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGK--------------CNLYADS 218
Query: 112 AY--LRCMCHP-VKECCMYIENTLMAAV 136
A+ ++ + P +K C+ +E T V
Sbjct: 219 AWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on CAB92983 SBP1 (Others) [Plasmodium falciparum]
Length = 391
Score = 24.3 bits (51), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 13/22 (59%)
Query: 138 PYCKIFSSNIINNAKEICSDYK 159
P IFS NI NN I S+YK
Sbjct: 128 PVSNIFSENIDNNKNYIESNYK 149
>M.Javanica_Scaff18216g078305 on AAW78167 TRAP (Invasion) [Plasmodium falciparum]
Length = 575
Score = 24.3 bits (51), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 17/88 (19%)
Query: 52 KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDYCKIFLDG 111
KE + D V A+FG+ ++ FN+ + P D + C ++ D
Sbjct: 173 KESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGK--------------CNLYADS 218
Query: 112 AY--LRCMCHP-VKECCMYIENTLMAAV 136
A+ ++ + P +K C+ +E T V
Sbjct: 219 AWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on AAW78153 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 24.3 bits (51), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 17/88 (19%)
Query: 52 KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDYCKIFLDG 111
KE + D V A+FG+ ++ FN+ + P D + C ++ D
Sbjct: 173 KESRKLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGK--------------CNLYADS 218
Query: 112 AY--LRCMCHP-VKECCMYIENTLMAAV 136
A+ ++ + P +K C+ +E T V
Sbjct: 219 AWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on AAW78149 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 24.3 bits (51), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 17/88 (19%)
Query: 52 KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDYCKIFLDG 111
KE + D V A+FG+ ++ FN+ + P D + C ++ D
Sbjct: 173 KESRKLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGK--------------CNLYADS 218
Query: 112 AY--LRCMCHP-VKECCMYIENTLMAAV 136
A+ ++ + P +K C+ +E T V
Sbjct: 219 AWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on AAW78137 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 24.3 bits (51), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 17/88 (19%)
Query: 52 KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDYCKIFLDG 111
KE + D V A+FG+ ++ FN+ + P D + C ++ D
Sbjct: 173 KESRKLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGK--------------CNLYADS 218
Query: 112 AY--LRCMCHP-VKECCMYIENTLMAAV 136
A+ ++ + P +K C+ +E T V
Sbjct: 219 AWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on AAW78156 TRAP (Invasion) [Plasmodium falciparum]
Length = 581
Score = 24.3 bits (51), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 17/88 (19%)
Query: 52 KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDYCKIFLDG 111
KE + D V A+FG+ ++ FN+ + P D + C ++ D
Sbjct: 173 KESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGK--------------CNLYADS 218
Query: 112 AY--LRCMCHP-VKECCMYIENTLMAAV 136
A+ ++ + P +K C+ +E T V
Sbjct: 219 AWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on AAW78154 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 24.3 bits (51), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 17/88 (19%)
Query: 52 KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDYCKIFLDG 111
KE + D+ V A+FG+ ++ FN+ + P D + C ++ D
Sbjct: 173 KESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGK--------------CNLYADS 218
Query: 112 AY--LRCMCHP-VKECCMYIENTLMAAV 136
A+ ++ + P +K C+ +E T V
Sbjct: 219 AWENVKNVIVPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on AAW78172 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 24.3 bits (51), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 17/88 (19%)
Query: 52 KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDYCKIFLDG 111
KE + D V A+FG+ ++ FN+ + P D + C ++ D
Sbjct: 173 KESRKLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGK--------------CNLYADS 218
Query: 112 AY--LRCMCHP-VKECCMYIENTLMAAV 136
A+ ++ + P +K C+ +E T V
Sbjct: 219 AWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on AAW78171 TRAP (Invasion) [Plasmodium falciparum]
Length = 551
Score = 23.9 bits (50), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 17/88 (19%)
Query: 52 KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDYCKIFLDG 111
KE + D V A+FG+ ++ FN+ + P D + C ++ D
Sbjct: 173 KESRKLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGK--------------CNLYADS 218
Query: 112 AY--LRCMCHP-VKECCMYIENTLMAAV 136
A+ ++ + P +K C+ +E T V
Sbjct: 219 AWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on AAW78134 TRAP (Invasion) [Plasmodium falciparum]
Length = 551
Score = 23.9 bits (50), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 17/88 (19%)
Query: 52 KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDYCKIFLDG 111
KE + D V A+FG+ ++ FN+ + P D + C ++ D
Sbjct: 173 KESRKLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGK--------------CNLYADS 218
Query: 112 AY--LRCMCHP-VKECCMYIENTLMAAV 136
A+ ++ + P +K C+ +E T V
Sbjct: 219 AWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on AAW78130 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 23.9 bits (50), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 17/88 (19%)
Query: 52 KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDYCKIFLDG 111
KE + D+ V A+FG+ ++ FN+ + P D + C ++ D
Sbjct: 173 KESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGK--------------CNLYADS 218
Query: 112 AY--LRCMCHP-VKECCMYIENTLMAAV 136
A+ ++ + P +K C+ +E T V
Sbjct: 219 AWENVKNVIVPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on AAA29774 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 23.9 bits (50), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 17/88 (19%)
Query: 52 KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDYCKIFLDG 111
KE + D V A+FG+ ++ FN+ + P D + C ++ D
Sbjct: 173 KESRKLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGK--------------CNLYADS 218
Query: 112 AY--LRCMCHP-VKECCMYIENTLMAAV 136
A+ ++ + P +K C+ +E T V
Sbjct: 219 AWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on AAA29770 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 23.9 bits (50), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 17/88 (19%)
Query: 52 KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDYCKIFLDG 111
KE + D V A+FG+ ++ FN+ + P D + C ++ D
Sbjct: 173 KESRKLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGK--------------CNLYADS 218
Query: 112 AY--LRCMCHP-VKECCMYIENTLMAAV 136
A+ ++ + P +K C+ +E T V
Sbjct: 219 AWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on AAA29771 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 23.9 bits (50), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 17/88 (19%)
Query: 52 KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDYCKIFLDG 111
KE + D V A+FG+ ++ FN+ + P D + C ++ D
Sbjct: 173 KESRKLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGK--------------CNLYADS 218
Query: 112 AY--LRCMCHP-VKECCMYIENTLMAAV 136
A+ ++ + P +K C+ +E T V
Sbjct: 219 AWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on AAW78146 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 23.9 bits (50), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 17/88 (19%)
Query: 52 KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDYCKIFLDG 111
KE + D+ V A+FG+ ++ FN+ + P D + C ++ D
Sbjct: 173 KESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGK--------------CNLYADS 218
Query: 112 AY--LRCMCHP-VKECCMYIENTLMAAV 136
A+ ++ + P +K C+ +E T V
Sbjct: 219 AWENVKNVIVPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on AAW78169 TRAP (Invasion) [Plasmodium falciparum]
Length = 551
Score = 23.9 bits (50), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 17/88 (19%)
Query: 52 KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDYCKIFLDG 111
KE + D V A+FG+ ++ FN+ + P D + C ++ D
Sbjct: 173 KESRKLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGK--------------CNLYADS 218
Query: 112 AY--LRCMCHP-VKECCMYIENTLMAAV 136
A+ ++ + P +K C+ +E T V
Sbjct: 219 AWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on AAQ11894 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 23.9 bits (50), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 17/88 (19%)
Query: 52 KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDYCKIFLDG 111
KE + D V A+FG+ ++ FN+ + P D + C ++ D
Sbjct: 173 KESRKLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGK--------------CNLYADS 218
Query: 112 AY--LRCMCHP-VKECCMYIENTLMAAV 136
A+ ++ + P +K C+ +E T V
Sbjct: 219 AWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on AAQ11891 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 23.9 bits (50), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 17/88 (19%)
Query: 52 KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDYCKIFLDG 111
KE + D V A+FG+ ++ FN+ + P D + C ++ D
Sbjct: 173 KESRKLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGK--------------CNLYADS 218
Query: 112 AY--LRCMCHP-VKECCMYIENTLMAAV 136
A+ ++ + P +K C+ +E T V
Sbjct: 219 AWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on AAQ11892 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 23.9 bits (50), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 17/88 (19%)
Query: 52 KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDYCKIFLDG 111
KE + D V A+FG+ ++ FN+ + P D + C ++ D
Sbjct: 173 KESRKLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGK--------------CNLYADS 218
Query: 112 AY--LRCMCHP-VKECCMYIENTLMAAV 136
A+ ++ + P +K C+ +E T V
Sbjct: 219 AWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on AAQ11895 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 23.9 bits (50), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 17/88 (19%)
Query: 52 KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDYCKIFLDG 111
KE + D V A+FG+ ++ FN+ + P D + C ++ D
Sbjct: 173 KESRKLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGK--------------CNLYADS 218
Query: 112 AY--LRCMCHP-VKECCMYIENTLMAAV 136
A+ ++ + P +K C+ +E T V
Sbjct: 219 AWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff18216g078305 on AAA29777 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 23.9 bits (50), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 17/88 (19%)
Query: 52 KEYARYCDVTVSSAIFGVTSNCDLYFNQTRIKTLPIDKERCEGFFNSTDHSDYCKIFLDG 111
KE + D V A+FG+ ++ FN+ + P D + C ++ D
Sbjct: 173 KESRKLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGK--------------CNLYADS 218
Query: 112 AY--LRCMCHP-VKECCMYIENTLMAAV 136
A+ ++ + P +K C+ +E T V
Sbjct: 219 AWENVKNVIGPFMKAVCVEVEKTASCGV 246
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2128g020869
(129 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_805038 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.15
XP_810140 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.73
XP_001609667 variant erythrocyte surface antigen-1, alpha subun... 25 2.4
XP_807804 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.8
XP_819719 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.1
XP_843645 VSG (Establishment) [Trypanosoma brucei] 24 4.4
XP_811703 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.0
XP_804902 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 6.0
XP_810068 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 8.6
>M.Javanica_Scaff2128g020869 on XP_805038 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 927
Score = 28.1 bits (61), Expect = 0.15, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 2/84 (2%)
Query: 31 PTTNSEKELEQTSTTLTSLTENKENDTKVPREATNELPNPGEIADPSLDPVHLEKPEYRP 90
P T ++ +QT+ +S+ T P E +E P P E P E E +P
Sbjct: 727 PATAGPQQTDQTTLNTSSVPSGGAPPT--PAEPKSEEPKPAESRPEEPKPAESESEEPKP 784
Query: 91 IAANNPMPVVTENPKEESTSISTT 114
N E ++ S +++
Sbjct: 785 AEPNAATSSAREGTADQPASATSS 808
>M.Javanica_Scaff2128g020869 on XP_810140 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 923
Score = 26.2 bits (56), Expect = 0.73, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 54 ENDTKVPREATNELPNPGEIADPSLDPVHLEKPEYRPIAAN 94
E++ P E+ +E P P E PV E E +P N
Sbjct: 756 ESEEPKPAESESEEPKPAESESEEPKPVESESEEPKPAEPN 796
>M.Javanica_Scaff2128g020869 on XP_001609667 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1303
Score = 24.6 bits (52), Expect = 2.4, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 35 SEKELEQTSTTLTSLTENKENDTKVPREATNELPNPG 71
++K LE+ L + + E+D K +EA EL N G
Sbjct: 700 AKKGLEEARKELETGEDLDEDDLKEAKEALGELTNGG 736
>M.Javanica_Scaff2128g020869 on XP_807804 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1054
Score = 23.9 bits (50), Expect = 3.8, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 92 AANNPMPVVTENPKEESTSISTTIINLGEGEKEKE 126
A +P+++E +E +S+ST+ N +EKE
Sbjct: 897 AQQTTLPLLSEGVDDEPSSLSTSTSNQRSDREEKE 931
Score = 23.5 bits (49), Expect = 5.3, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 34 NSEKELEQTSTTLTSLTENKENDTKVPREATNELPNPGEIADPSLDPVHLEKPEYRPIAA 93
+SE+E ++T+ + T + DTK E + N + P L P ++ A
Sbjct: 793 SSEEENKKTAASATYSDSHAVADTKRREEQMEKAANDVDDLPPPLSPAPEAASGHKSPDA 852
Query: 94 NNPMPVVTENPKEESTSI 111
+ + V E+P++E S+
Sbjct: 853 EDALGV--EHPEQEEESL 868
>M.Javanica_Scaff2128g020869 on XP_819719 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1053
Score = 23.9 bits (50), Expect = 4.1, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 92 AANNPMPVVTENPKEESTSISTTIINLGEGEKEKE 126
A +P+++E +E +S+ST+ N +EKE
Sbjct: 896 AQQTTLPLLSEGVDDEPSSLSTSTSNQRSDREEKE 930
Score = 23.5 bits (49), Expect = 5.6, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 34 NSEKELEQTSTTLTSLTENKENDTKVPREATNELPNPGEIADPSLDPVHLEKPEYRPIAA 93
+SE+E ++T+ + T + DTK E + N + P L P ++ A
Sbjct: 792 SSEEENKKTAASATYSDSHAVADTKRREEQMEKAANDVDDLPPPLSPAPEAASGHKSPDA 851
Query: 94 NNPMPVVTENPKEESTSI 111
+ + V E+P++E S+
Sbjct: 852 EDALGV--EHPEQEEESL 867
>M.Javanica_Scaff2128g020869 on XP_843645 VSG (Establishment) [Trypanosoma brucei]
Length = 569
Score = 23.9 bits (50), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 4/94 (4%)
Query: 30 QPTTNSE---KELEQTSTTLTSLTENKENDTKVPREATNELPNPGEIADPSLDPVHLEKP 86
+P +NS K + L S +N +D+ AT++ N G + L + K
Sbjct: 231 RPESNSAGPGKAIAADVVCLCSEHKNAASDS-CTDTATSDTDNFGVGSGMKLKAFNRWKQ 289
Query: 87 EYRPIAANNPMPVVTENPKEESTSISTTIINLGE 120
NP VT NP + ++S NLG+
Sbjct: 290 LQTKCKEQNPAKAVTLNPTAITAALSAVFGNLGK 323
>M.Javanica_Scaff2128g020869 on XP_811703 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1043
Score = 23.5 bits (49), Expect = 5.0, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 37 KELEQTSTTLTSLTENKENDTKVPREATNELPNPGEI 73
KE+ QT T T +TK+P E+ P+ +I
Sbjct: 964 KEVPQTVDTAPGNTSTTPGETKIPSESNATTPSDTDI 1000
>M.Javanica_Scaff2128g020869 on XP_804902 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1042
Score = 23.5 bits (49), Expect = 6.0, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 37 KELEQTSTTLTSLTENKENDTKVPREATNELPNPGEI 73
KE+ QT T T +TK+P E+ P+ +I
Sbjct: 963 KEVPQTVDTAPGNTSTTPGETKIPSESNATTPSDTDI 999
>M.Javanica_Scaff2128g020869 on XP_810068 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1147
Score = 22.7 bits (47), Expect = 8.6, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 37 KELEQTSTTLTSLTENKENDTKVPREATNELPNPGEI 73
KE Q T T +TK+P E+ +P+ EI
Sbjct: 1068 KEAPQPVDTAPGNTSTTPGETKIPSESNATIPSDTEI 1104
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff23067g087209
(86 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ABA06450 MSA-2a1 (Invasion) [Babesia bovis] 25 0.42
AAL15422 MSA-2a2 (Invasion) [Babesia bovis] 25 0.43
AAL15421 MSA-2a1 (Invasion) [Babesia bovis] 25 0.43
ABA06441 MSA-2a/b (Invasion) [Babesia bovis] 24 0.97
ABA06437 MSA-2a/b (Invasion) [Babesia bovis] 22 5.6
>M.Javanica_Scaff23067g087209 on ABA06450 MSA-2a1 (Invasion) [Babesia bovis]
Length = 316
Score = 25.4 bits (54), Expect = 0.42, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 17/22 (77%)
Query: 42 FSSILLRIPMIRKVAAKKNESL 63
F S+LLR+P+I+K+ ++ N L
Sbjct: 112 FKSLLLRVPLIKKMLSEFNAFL 133
>M.Javanica_Scaff23067g087209 on AAL15422 MSA-2a2 (Invasion) [Babesia bovis]
Length = 292
Score = 25.4 bits (54), Expect = 0.43, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 17/22 (77%)
Query: 42 FSSILLRIPMIRKVAAKKNESL 63
F S+LLR+P+I+K+ ++ N L
Sbjct: 112 FKSLLLRVPLIKKMLSEFNAFL 133
>M.Javanica_Scaff23067g087209 on AAL15421 MSA-2a1 (Invasion) [Babesia bovis]
Length = 316
Score = 25.4 bits (54), Expect = 0.43, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 17/22 (77%)
Query: 42 FSSILLRIPMIRKVAAKKNESL 63
F S+LLR+P+I+K+ ++ N L
Sbjct: 112 FKSLLLRVPLIKKMLSEFNAFL 133
>M.Javanica_Scaff23067g087209 on ABA06441 MSA-2a/b (Invasion) [Babesia bovis]
Length = 278
Score = 24.3 bits (51), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 42 FSSILLRIPMIRKVAAKKN 60
F S+LLR+P+I+K+ + N
Sbjct: 112 FKSLLLRVPLIKKMLTEFN 130
>M.Javanica_Scaff23067g087209 on ABA06437 MSA-2a/b (Invasion) [Babesia bovis]
Length = 263
Score = 22.3 bits (46), Expect = 5.6, Method: Composition-based stats.
Identities = 7/17 (41%), Positives = 15/17 (88%)
Query: 42 FSSILLRIPMIRKVAAK 58
F+SIL+R+P+I+ + ++
Sbjct: 112 FNSILVRVPLIKAMLSE 128
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff20518g082823
(129 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1909g019260
(69 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001219207 VSG (Establishment) [Trypanosoma brucei] 25 0.44
XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum] 22 5.6
>M.Javanica_Scaff1909g019260 on XP_001219207 VSG (Establishment) [Trypanosoma brucei]
Length = 453
Score = 24.6 bits (52), Expect = 0.44, Method: Composition-based stats.
Identities = 9/17 (52%), Positives = 10/17 (58%), Gaps = 1/17 (5%)
Query: 9 HMCCHGSLWRS-VDYWS 24
H+CC G WRS WS
Sbjct: 214 HLCCEGCSWRSNTTVWS 230
>M.Javanica_Scaff1909g019260 on XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2238
Score = 21.9 bits (45), Expect = 5.6, Method: Composition-based stats.
Identities = 6/17 (35%), Positives = 9/17 (52%)
Query: 28 CRRSFNYRTCHWSRRCL 44
C + + Y HW RC+
Sbjct: 861 CNQKYGYPQRHWGWRCV 877
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1875g018997
(391 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAC48311 TRAP C-1 (Adhesin) [Cryptosporidium parvum] 29 0.30
XP_810932 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 1.0
XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum] 26 5.9
XP_966151 TLP (Invasion) [Plasmodium falciparum] 25 6.6
>M.Javanica_Scaff1875g018997 on AAC48311 TRAP C-1 (Adhesin) [Cryptosporidium parvum]
Length = 255
Score = 29.3 bits (64), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
Query: 328 KCPIQNCPNTQIPIKRDW--QKNPIFPFNKEIFLKEEE 363
KCP +NCP + I W Q FPFNK +F+ EE
Sbjct: 204 KCP-ENCPQYGVSI-LGWGCQFESTFPFNKNLFVSYEE 239
>M.Javanica_Scaff1875g018997 on XP_810932 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 753
Score = 28.1 bits (61), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 13/128 (10%)
Query: 183 EKKMVFTAIVH-DKNKNELSRKDLNENEWMGNEQIEMILDEIK-IKNYLKKHREHSMIFS 240
EK+ + +A+++ D N + L ++D +E ++ + + DE+ I + L + + FS
Sbjct: 430 EKEELESALLYSDGNLHLLQQRDNDEGSFI---SLSRLTDELSTINSVLSTWAQKDIFFS 486
Query: 241 VFVVPTVVCSICGQNKRSLGKLRLLPGCNHFIHKDCATTNINNMDRLNTSLNTRNNNSGG 300
F +PT + S G+ + ++ C + N ++ L +NSG
Sbjct: 487 SFSIPTAGLVAVLSDAASDGRWN-----DEYL---CLHATVKNAVKVKEGLQLTESNSGV 538
Query: 301 LLSRMRRD 308
L S RD
Sbjct: 539 LWSVNTRD 546
>M.Javanica_Scaff1875g018997 on XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3954
Score = 25.8 bits (55), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 8/57 (14%)
Query: 284 MDRLNTSLNTRNNNSGGLLSRMRRDSSNSGTPRSTTSLPLIDIFKCPIQNCPNTQIP 340
+D+LN N NNNSG + + SG T+ +P + P N ++ IP
Sbjct: 3790 LDKLNEQWNKDNNNSGNI--------NPSGNTPPTSDIPSGKLSDIPSDNNIHSDIP 3838
>M.Javanica_Scaff1875g018997 on XP_966151 TLP (Invasion) [Plasmodium falciparum]
Length = 1371
Score = 25.4 bits (54), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 253 GQNKRSLGKLRLLPGCNHFIHKDCATTNINNMDRLNTSLNTRNNNSGG----LLSRMRRD 308
+NK L K ++ + +++D NINN D +TS + RNNNSG MR+
Sbjct: 736 NRNKGFLKKNSIILKSLYNLNEDYVNNNINN-DAGSTSSHCRNNNSGHNDIPHFKNMRKY 794
Query: 309 SSNSGTPRSTTS 320
+S + P S+ S
Sbjct: 795 NSETNIPCSSKS 806
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff22829g086796
(73 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff18496g078905
(77 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_804106 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.6
XP_001351877 PfEMP1 (Establishment) [Plasmodium falciparum] 22 4.0
>M.Javanica_Scaff18496g078905 on XP_804106 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1006
Score = 23.1 bits (48), Expect = 2.6, Method: Composition-based stats.
Identities = 8/17 (47%), Positives = 13/17 (76%), Gaps = 3/17 (17%)
Query: 62 YEWPS---NLVPFQIWG 75
++W S +LVP++IWG
Sbjct: 180 FKWQSQSTSLVPYEIWG 196
>M.Javanica_Scaff18496g078905 on XP_001351877 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2270
Score = 22.3 bits (46), Expect = 4.0, Method: Composition-based stats.
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 52 RKRQVIAGQVYEWPSNLVPFQIWGG 76
R+R++ G++ EW + Q+ GG
Sbjct: 956 RRRKLYIGKIKEWAGIQLKSQVEGG 980
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff17840g077524
(338 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1677g017550
(134 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609315 variant erythrocyte surface antigen-1, alpha subun... 24 3.9
>M.Javanica_Scaff1677g017550 on XP_001609315 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1338
Score = 23.9 bits (50), Expect = 3.9, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 91 FQGIVKQDSNNNFYLNVKDIVKKFGRNTGHLL 122
+G+V +++NN +K++ G G+LL
Sbjct: 734 LEGVVDENANNELKEKIKELTNGSGGGKGNLL 765
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff22536g086322
(53 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff24720g089796
(53 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_843644 VSG (Establishment) [Trypanosoma brucei] 25 0.22
AAA30134 SPAG-1 (Adhesion) [Theileria annulata] 23 1.2
XP_805183 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.4
XP_821390 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 2.3
>M.Javanica_Scaff24720g089796 on XP_843644 VSG (Establishment) [Trypanosoma brucei]
Length = 490
Score = 25.0 bits (53), Expect = 0.22, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 20 AEMSRPKCRGPKCREAEMSPAEL 42
A +SRP C+E E++P EL
Sbjct: 266 ATISRPPASATGCKEPEVAPEEL 288
>M.Javanica_Scaff24720g089796 on AAA30134 SPAG-1 (Adhesion) [Theileria annulata]
Length = 907
Score = 22.7 bits (47), Expect = 1.2, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 6/40 (15%)
Query: 11 RNVAGQNVA-AEMSRPKCRGPKCREAEMSPAELSPSFLIK 49
++V+ ++V ++S P R P + PAEL PS +I+
Sbjct: 787 KDVSEEHVGIGDLSDPSSRTPNAK-----PAELGPSLVIQ 821
>M.Javanica_Scaff24720g089796 on XP_805183 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 231
Score = 22.7 bits (47), Expect = 1.4, Method: Composition-based stats.
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 11 RNVAGQNVAAEMSRPKC 27
+NVA + + +SRPKC
Sbjct: 167 KNVAARTSSPVVSRPKC 183
>M.Javanica_Scaff24720g089796 on XP_821390 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 940
Score = 21.9 bits (45), Expect = 2.3, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 3 VSLNLGTARNVAGQNVAAEMSRPKCRGPKCRE 34
VSL L T+ N A ++ MS CR P E
Sbjct: 271 VSLILYTSDNAASWTLSKGMSADGCRVPSVVE 302
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff23241g087474
(495 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_802791 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.3
>M.Javanica_Scaff23241g087474 on XP_802791 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 140
Score = 25.4 bits (54), Expect = 4.3, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 177 PRVSTMGDSLSQHQQSFRGASRTTFSSSQSSNSLAGGN---GYEPMIELIISGNTTAGVK 233
P ST D+ + ++ S TT + SS S AG G EP++E I+ TAG
Sbjct: 24 PLDSTEIDAYNPNKASIPSLVNTTIEGTVSS-STAGRQQQAGKEPLLESSIANGETAGGM 82
Query: 234 QQQQHSV 240
Q+ V
Sbjct: 83 DGQEEEV 89
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2410g022743
(326 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff208g003421
(164 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609539 variant erythrocyte surface antigen-1, beta subuni... 24 7.2
>M.Javanica_Scaff208g003421 on XP_001609539 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 884
Score = 23.9 bits (50), Expect = 7.2, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 7/58 (12%)
Query: 48 TGNREIAQKSELGNQPKFSEIGRKKRRKSEFRSTTALEHNYNETLLHKIAIRIKAKKA 105
TGN E QK G QP G++ + +EF+ +A +++ E + I KAK+A
Sbjct: 303 TGNGEFVQKLLSGKQPN----GKEGIQWNEFQGDSAEKNSVAE---YYSTIYDKAKEA 353
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff22931g086974
(51 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff20894g083497
(171 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff18370g078641
(277 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_815807 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.0
XP_816813 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.7
>M.Javanica_Scaff18370g078641 on XP_815807 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 899
Score = 25.0 bits (53), Expect = 6.0, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 23/59 (38%)
Query: 118 AASFRATAEFNSRHTHKEGDSTQYTYIVDGGGALDGFQKIFDQSGPGKTIVKNFCAANS 176
A A++ RH ++G S + + D GGA S GK VK + S
Sbjct: 756 AQKTEASSTPAGRHPMEQGQSMESSKDADSGGASTAAVPTITTSSAGKDTVKRVASGTS 814
>M.Javanica_Scaff18370g078641 on XP_816813 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 420
Score = 24.6 bits (52), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 7/39 (17%)
Query: 145 VDGGGALDGFQKI-------FDQSGPGKTIVKNFCAANS 176
VDGG DG+Q + + P KT+ N A++
Sbjct: 292 VDGGSTADGYQTVSTGYGDKTQEDAPHKTLTGNLATADA 330
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2159g021068
(125 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAD03350 MIC1 (Adhesin) [Eimeria tenella] 24 2.6
>M.Javanica_Scaff2159g021068 on AAD03350 MIC1 (Adhesin) [Eimeria tenella]
Length = 255
Score = 24.3 bits (51), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 81 CKSRRSPRSLQSHWSSRSYRANNTWFFKCAIRGQNLNC 118
C + PR LQS+WS+ + + N C ++ C
Sbjct: 205 CSTSNCPRYLQSNWSNVTQQVNGIIKAACKDLAKDAVC 242
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff21906g085244
(301 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_806961 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.1
XP_804884 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.3
XP_819216 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 3.1
XP_817875 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 4.1
XP_811309 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.0
>M.Javanica_Scaff21906g085244 on XP_806961 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 702
Score = 27.3 bits (59), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Query: 82 YIIDSRVIPASRCIFKSSLK-----ISNLIFSAACIEYFRGGYGRPFDASFGSVNSRSTA 136
Y++ R ++ IF S LK I ++ S A ++ F G P D S++ +T
Sbjct: 443 YLLHERRDQSTDGIFLSPLKEELDTIMSVANSWALMDIFFSGLSIPTDGLVASLSDLATP 502
Query: 137 DSWL 140
D+W+
Sbjct: 503 DTWI 506
>M.Javanica_Scaff21906g085244 on XP_804884 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 732
Score = 27.3 bits (59), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Query: 82 YIIDSRVIPASRCIFKSSLK-----ISNLIFSAACIEYFRGGYGRPFDASFGSVNSRSTA 136
Y++ R ++ IF S LK I ++ S A ++ F G P D S++ +T
Sbjct: 443 YLLHERRDQSTDGIFLSPLKEELDTIMSVANSWALMDIFFSGLSIPTDGLVASLSDLATP 502
Query: 137 DSWL 140
D+W+
Sbjct: 503 DTWI 506
>M.Javanica_Scaff21906g085244 on XP_819216 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 482
Score = 25.8 bits (55), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Query: 82 YIIDSRVIPASRCIFKSSLK-----ISNLIFSAACIEYFRGGYGRPFDASFGSVNSRSTA 136
Y++ + ++ IF S LK I ++ S A ++ F G P D ++ +T+
Sbjct: 405 YLLHEKRAQSTDAIFLSPLKEELDTIMSVANSWALMDIFFSGLSIPTDGLVAFLSDSATS 464
Query: 137 DSWL 140
D+W+
Sbjct: 465 DTWI 468
>M.Javanica_Scaff21906g085244 on XP_817875 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 935
Score = 25.8 bits (55), Expect = 4.1, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 214 EQPSTSQIYSNNQQQDEGFASSSAALSIS 242
+ PS ++ + NQ D G AS+SA ++S
Sbjct: 804 QSPSEPKLLNENQGADSGGASASAVSTVS 832
>M.Javanica_Scaff21906g085244 on XP_811309 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1033
Score = 25.0 bits (53), Expect = 6.0, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 44/105 (41%), Gaps = 9/105 (8%)
Query: 178 LTNDEMQQQQQHHKRHHC---HSNCGGSLLHSRTSMYISEQPSTSQIYSNNQQQDEGFAS 234
L+ D+ QQ H+ + S+ HS +++ +S+ Y Q +++G A
Sbjct: 788 LSEDKTSQQTTPHEDYKSMQRDSDVQPQDPHSEVLTEVADVEGSSESYDTQQPEEDGEAD 847
Query: 235 SSAALSISSRPTIGFDTAEYSGENGLRMLNGDKQLLTESDPGGGN 279
+ S+S P TA S + + G+ Q+ ++P N
Sbjct: 848 GRSGGSVS--PV----TASLSMDTATAPVYGEHQVQQSTEPSTEN 886
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff16344g074381
(209 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1786g018354
(336 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ABW16954 ROM1 (Invasion) [Plasmodium falciparum] 27 1.6
XP_813188 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 8.0
>M.Javanica_Scaff1786g018354 on ABW16954 ROM1 (Invasion) [Plasmodium falciparum]
Length = 278
Score = 26.9 bits (58), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 186 KLAELKKPRELLLVTFGQPRVGNIEYAKLHRRLVP 220
K A+ P + LLVT G I+ ++HR ++P
Sbjct: 74 KPADFLTPSDSLLVTLGANVASRIKQGEIHRLILP 108
>M.Javanica_Scaff1786g018354 on XP_813188 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1002
Score = 25.0 bits (53), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 32/77 (41%), Gaps = 4/77 (5%)
Query: 248 CIPLHTHGPFHHPTEIWYPTEEMNLNNSLFKICDGLPIGEDQNCRQNLIFKNF---FKNF 304
+P H ++ +M+ NN LF DG I + + I+K+F +
Sbjct: 591 TLPAHDENAGWEANTKYHVVLQMDYNNGLFVYVDGKRICDTDDYEVEDIYKSFSHKLQKL 650
Query: 305 FSSNAYFVHFQVGDHLK 321
SS++ HF +G K
Sbjct: 651 LSSHS-ISHFYIGGDGK 666
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff21703g084915
(82 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001608668 variant erythrocyte surface antigen-1, alpha subun... 26 0.36
XP_845136 VSG (Establishment) [Trypanosoma brucei] 25 0.59
BAC44837 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 24 1.0
AAS46313 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 24 1.3
AAS46314 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 24 1.3
AAS46325 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 24 1.3
AAS46315 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 24 1.3
AAS46316 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 24 1.3
AAS46317 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 24 1.3
AAS46318 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 24 1.3
AAS46326 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 24 1.3
AAS46319 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 24 1.3
AAS46321 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 24 1.3
AAS46323 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 24 1.3
AAS46324 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 24 1.3
AAS46309 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 24 1.4
AAS46311 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 24 1.4
AAS46308 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 24 1.5
XP_001350796 PfEMP1 (Establishment) [Plasmodium falciparum] 24 1.5
AAT99615 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 24 1.6
AAT99618 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 24 1.6
AAT99620 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 24 1.6
AAT99621 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 24 1.6
AAT99622 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 24 1.6
XP_001351563 PfEMP1 (Establishment) [Plasmodium falciparum] 23 1.8
XP_001351517 PfEMP1 (Establishment) [Plasmodium falciparum] 23 2.4
>M.Javanica_Scaff21703g084915 on XP_001608668 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1337
Score = 25.8 bits (55), Expect = 0.36, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 25 GYTNAESCQACFNRVCSPPC--TASCSACKNCQ 55
G+ C C PPC + +C+A K CQ
Sbjct: 176 GHHLGRGCTRCKGSSGQPPCECSGTCTAGKECQ 208
>M.Javanica_Scaff21703g084915 on XP_845136 VSG (Establishment) [Trypanosoma brucei]
Length = 481
Score = 25.0 bits (53), Expect = 0.59, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 45 TASCSACKNCQDINFKPQCRTPCR 68
TA +A C I+ +C+TPC+
Sbjct: 401 TAKEAAEAKCNKIDKDTECKTPCK 424
>M.Javanica_Scaff21703g084915 on BAC44837 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 1566
Score = 24.3 bits (51), Expect = 1.0, Method: Composition-based stats.
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 51 CKNCQDINFKP 61
C C+DI+FKP
Sbjct: 375 CSECKDIDFKP 385
>M.Javanica_Scaff21703g084915 on AAS46313 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 662
Score = 23.9 bits (50), Expect = 1.3, Method: Composition-based stats.
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 51 CKNCQDINFKP 61
C C+DI+FKP
Sbjct: 276 CSECKDIDFKP 286
>M.Javanica_Scaff21703g084915 on AAS46314 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 662
Score = 23.9 bits (50), Expect = 1.3, Method: Composition-based stats.
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 51 CKNCQDINFKP 61
C C+DI+FKP
Sbjct: 276 CSECKDIDFKP 286
>M.Javanica_Scaff21703g084915 on AAS46325 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 668
Score = 23.9 bits (50), Expect = 1.3, Method: Composition-based stats.
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 51 CKNCQDINFKP 61
C C+DI+FKP
Sbjct: 282 CSECKDIDFKP 292
>M.Javanica_Scaff21703g084915 on AAS46315 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 671
Score = 23.9 bits (50), Expect = 1.3, Method: Composition-based stats.
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 51 CKNCQDINFKP 61
C C+DI+FKP
Sbjct: 282 CSECKDIDFKP 292
>M.Javanica_Scaff21703g084915 on AAS46316 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 671
Score = 23.9 bits (50), Expect = 1.3, Method: Composition-based stats.
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 51 CKNCQDINFKP 61
C C+DI+FKP
Sbjct: 282 CSECKDIDFKP 292
>M.Javanica_Scaff21703g084915 on AAS46317 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 672
Score = 23.9 bits (50), Expect = 1.3, Method: Composition-based stats.
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 51 CKNCQDINFKP 61
C C+DI+FKP
Sbjct: 282 CSECKDIDFKP 292
>M.Javanica_Scaff21703g084915 on AAS46318 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 672
Score = 23.9 bits (50), Expect = 1.3, Method: Composition-based stats.
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 51 CKNCQDINFKP 61
C C+DI+FKP
Sbjct: 282 CSECKDIDFKP 292
>M.Javanica_Scaff21703g084915 on AAS46326 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 672
Score = 23.9 bits (50), Expect = 1.3, Method: Composition-based stats.
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 51 CKNCQDINFKP 61
C C+DI+FKP
Sbjct: 282 CSECKDIDFKP 292
>M.Javanica_Scaff21703g084915 on AAS46319 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 673
Score = 23.9 bits (50), Expect = 1.3, Method: Composition-based stats.
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 51 CKNCQDINFKP 61
C C+DI+FKP
Sbjct: 282 CSECKDIDFKP 292
>M.Javanica_Scaff21703g084915 on AAS46321 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 673
Score = 23.9 bits (50), Expect = 1.3, Method: Composition-based stats.
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 51 CKNCQDINFKP 61
C C+DI+FKP
Sbjct: 282 CSECKDIDFKP 292
>M.Javanica_Scaff21703g084915 on AAS46323 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 673
Score = 23.9 bits (50), Expect = 1.3, Method: Composition-based stats.
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 51 CKNCQDINFKP 61
C C+DI+FKP
Sbjct: 282 CSECKDIDFKP 292
>M.Javanica_Scaff21703g084915 on AAS46324 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 673
Score = 23.9 bits (50), Expect = 1.3, Method: Composition-based stats.
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 51 CKNCQDINFKP 61
C C+DI+FKP
Sbjct: 282 CSECKDIDFKP 292
>M.Javanica_Scaff21703g084915 on AAS46309 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 663
Score = 23.9 bits (50), Expect = 1.4, Method: Composition-based stats.
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 51 CKNCQDINFKP 61
C C+DI+FKP
Sbjct: 277 CSECKDIDFKP 287
>M.Javanica_Scaff21703g084915 on AAS46311 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 668
Score = 23.9 bits (50), Expect = 1.4, Method: Composition-based stats.
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 51 CKNCQDINFKP 61
C C+DI+FKP
Sbjct: 282 CSECKDIDFKP 292
>M.Javanica_Scaff21703g084915 on AAS46308 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 657
Score = 23.9 bits (50), Expect = 1.5, Method: Composition-based stats.
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 51 CKNCQDINFKP 61
C C+DI+FKP
Sbjct: 282 CSECKDIDFKP 292
>M.Javanica_Scaff21703g084915 on XP_001350796 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2646
Score = 23.9 bits (50), Expect = 1.5, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 28 NAESCQACFNRVCSPPCTASCSACKNCQ 55
+AE+C+ C R PC+ S N Q
Sbjct: 735 DAETCKNCEPRKFKNPCSGDTSGDSNKQ 762
Score = 21.9 bits (45), Expect = 7.3, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 10/19 (52%), Gaps = 4/19 (21%)
Query: 51 CKNCQDINFKPQCRTPCRG 69
CKNC+ FK PC G
Sbjct: 739 CKNCEPRKFK----NPCSG 753
>M.Javanica_Scaff21703g084915 on AAT99615 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 620
Score = 23.9 bits (50), Expect = 1.6, Method: Composition-based stats.
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 51 CKNCQDINFKP 61
C C+DI+FKP
Sbjct: 251 CSECKDIDFKP 261
>M.Javanica_Scaff21703g084915 on AAT99618 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 620
Score = 23.9 bits (50), Expect = 1.6, Method: Composition-based stats.
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 51 CKNCQDINFKP 61
C C+DI+FKP
Sbjct: 251 CSECKDIDFKP 261
>M.Javanica_Scaff21703g084915 on AAT99620 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 620
Score = 23.9 bits (50), Expect = 1.6, Method: Composition-based stats.
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 51 CKNCQDINFKP 61
C C+DI+FKP
Sbjct: 251 CSECKDIDFKP 261
>M.Javanica_Scaff21703g084915 on AAT99621 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 620
Score = 23.9 bits (50), Expect = 1.6, Method: Composition-based stats.
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 51 CKNCQDINFKP 61
C C+DI+FKP
Sbjct: 251 CSECKDIDFKP 261
>M.Javanica_Scaff21703g084915 on AAT99622 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 620
Score = 23.9 bits (50), Expect = 1.6, Method: Composition-based stats.
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 51 CKNCQDINFKP 61
C C+DI+FKP
Sbjct: 251 CSECKDIDFKP 261
>M.Javanica_Scaff21703g084915 on XP_001351563 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2149
Score = 23.5 bits (49), Expect = 1.8, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 52 KNCQDINFKPQCRTPCRGF 70
KN I K C+TPC+ F
Sbjct: 616 KNGTKIKCKNGCKTPCKCF 634
>M.Javanica_Scaff21703g084915 on XP_001351517 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2193
Score = 23.1 bits (48), Expect = 2.4, Method: Composition-based stats.
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 43 PCTASCSACKNCQDINFKPQCR 64
PC+ CKNC + K +C+
Sbjct: 1383 PCSQFTVDCKNCNGGHTKGKCK 1404
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff21326g084269
(696 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_810529 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.40
XP_820741 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.55
XP_810777 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 2.6
XP_810005 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 3.2
XP_804487 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 3.5
XP_805195 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 4.1
XP_805196 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 4.7
XP_805710 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 6.6
XP_817882 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 6.9
XP_817165 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 7.1
>M.Javanica_Scaff21326g084269 on XP_810529 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 791
Score = 30.4 bits (67), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/113 (22%), Positives = 49/113 (43%), Gaps = 22/113 (19%)
Query: 81 GYEELLKIPLNSNES--ITDLQILAAQRILL-----FCFFSFC-RICQIPVNSTSSSPSG 132
G E + + L N++ D ++L + + L F+FC C+I + SSP
Sbjct: 636 GKEHQVALMLQGNKASVYVDGELLGEEEVPLTGEKPLEIFAFCFGACKIDGDEEESSP-- 693
Query: 133 NCTTRNFQHPIASQERLLAIASNENIYVFNNTLNSTDTKGYEELLKIPLNSNE 185
I + R+ N++++N LNST+ + ++ + +P + E
Sbjct: 694 --------KEIGKKPRVTVT----NVFLYNRPLNSTEMRAIKDRIPVPTRAPE 734
Score = 26.2 bits (56), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 8/29 (27%), Positives = 19/29 (65%)
Query: 66 NIYVFNNTLNSTDTKGYEELLKIPLNSNE 94
N++++N LNST+ + ++ + +P + E
Sbjct: 706 NVFLYNRPLNSTEMRAIKDRIPVPTRAPE 734
>M.Javanica_Scaff21326g084269 on XP_820741 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 894
Score = 30.0 bits (66), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 25/48 (52%)
Query: 512 FQNGTIQRVANIATIVEGQQQYHVTTLWNITLENNQFGHLGMVLDENN 559
F+ GT +A T+V+G Y + ++N+ +N + G++L N
Sbjct: 165 FERGTKVYLARPTTVVQGSDIYMLAGIYNLDAADNTSAYWGLLLSRGN 212
>M.Javanica_Scaff21326g084269 on XP_810777 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 846
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/51 (23%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Query: 44 PDDQQVLAIASQERLLAIASNENIYVFNNTLNSTDTKGYEELLKIPLNSNE 94
PD+ I + R+ N++++N LNST+ ++ + +P + E
Sbjct: 707 PDESSPKEIGKKPRVTVT----NVFLYNRPLNSTEMSAIKDRIPVPTRAPE 753
>M.Javanica_Scaff21326g084269 on XP_810005 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 776
Score = 27.3 bits (59), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 21/34 (61%)
Query: 65 ENIYVFNNTLNSTDTKGYEELLKIPLNSNESITD 98
+N++++N LNST+ ++ + +P + ES D
Sbjct: 679 KNVFLYNRPLNSTEMTAIKDRIPVPKRAPESQAD 712
Score = 27.3 bits (59), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 21/34 (61%)
Query: 156 ENIYVFNNTLNSTDTKGYEELLKIPLNSNESITD 189
+N++++N LNST+ ++ + +P + ES D
Sbjct: 679 KNVFLYNRPLNSTEMTAIKDRIPVPKRAPESQAD 712
>M.Javanica_Scaff21326g084269 on XP_804487 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 752
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 9/31 (29%), Positives = 20/31 (64%)
Query: 65 ENIYVFNNTLNSTDTKGYEELLKIPLNSNES 95
+N++++N LNST+ + ++ + +P ES
Sbjct: 680 KNVFLYNRPLNSTEMRAIKDRVPVPTRGPES 710
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 9/31 (29%), Positives = 20/31 (64%)
Query: 156 ENIYVFNNTLNSTDTKGYEELLKIPLNSNES 186
+N++++N LNST+ + ++ + +P ES
Sbjct: 680 KNVFLYNRPLNSTEMRAIKDRVPVPTRGPES 710
>M.Javanica_Scaff21326g084269 on XP_805195 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 769
Score = 26.9 bits (58), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 9/30 (30%), Positives = 19/30 (63%)
Query: 66 NIYVFNNTLNSTDTKGYEELLKIPLNSNES 95
N++++N LNST+ + ++ + +P ES
Sbjct: 698 NVFLYNRPLNSTEMRAIKDRVPVPTRGPES 727
Score = 26.9 bits (58), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 9/30 (30%), Positives = 19/30 (63%)
Query: 157 NIYVFNNTLNSTDTKGYEELLKIPLNSNES 186
N++++N LNST+ + ++ + +P ES
Sbjct: 698 NVFLYNRPLNSTEMRAIKDRVPVPTRGPES 727
>M.Javanica_Scaff21326g084269 on XP_805196 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 731
Score = 26.9 bits (58), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 8/55 (14%)
Query: 132 GNCTTRNFQHPIASQERLLAIASNENIYVFNNTLNSTDTKGYEELLKIPLNSNES 186
G C N SQE + + N++++N LNST+ + ++ + +P ES
Sbjct: 643 GACGEEN-----PSQESHVTVT---NVFLYNRPLNSTEMRAIKDRVPVPTRGPES 689
Score = 26.9 bits (58), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 9/30 (30%), Positives = 19/30 (63%)
Query: 66 NIYVFNNTLNSTDTKGYEELLKIPLNSNES 95
N++++N LNST+ + ++ + +P ES
Sbjct: 660 NVFLYNRPLNSTEMRAIKDRVPVPTRGPES 689
>M.Javanica_Scaff21326g084269 on XP_805710 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 753
Score = 26.6 bits (57), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 8/24 (33%), Positives = 18/24 (75%)
Query: 66 NIYVFNNTLNSTDTKGYEELLKIP 89
N++++N +LNST+ + ++ + IP
Sbjct: 682 NVFLYNRSLNSTEMRAIKDRIPIP 705
Score = 26.6 bits (57), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 8/24 (33%), Positives = 18/24 (75%)
Query: 157 NIYVFNNTLNSTDTKGYEELLKIP 180
N++++N +LNST+ + ++ + IP
Sbjct: 682 NVFLYNRSLNSTEMRAIKDRIPIP 705
>M.Javanica_Scaff21326g084269 on XP_817882 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 753
Score = 26.2 bits (56), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 19/28 (67%)
Query: 62 ASNENIYVFNNTLNSTDTKGYEELLKIP 89
A +N++++N LNST+ + ++ + IP
Sbjct: 678 AKVKNVFLYNRPLNSTEMRAIKDRIPIP 705
Score = 26.2 bits (56), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 19/28 (67%)
Query: 153 ASNENIYVFNNTLNSTDTKGYEELLKIP 180
A +N++++N LNST+ + ++ + IP
Sbjct: 678 AKVKNVFLYNRPLNSTEMRAIKDRIPIP 705
>M.Javanica_Scaff21326g084269 on XP_817165 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 750
Score = 26.2 bits (56), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 8/31 (25%), Positives = 20/31 (64%)
Query: 65 ENIYVFNNTLNSTDTKGYEELLKIPLNSNES 95
+N++++N LNST+ + ++ + +P E+
Sbjct: 678 KNVFLYNRPLNSTEMRAIKDRIPVPTRGPET 708
Score = 26.2 bits (56), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 8/31 (25%), Positives = 20/31 (64%)
Query: 156 ENIYVFNNTLNSTDTKGYEELLKIPLNSNES 186
+N++++N LNST+ + ++ + +P E+
Sbjct: 678 KNVFLYNRPLNSTEMRAIKDRIPVPTRGPET 708
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff197g003282
(492 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum] 30 0.31
AAZ38162 RON1 (Invasion) [Toxoplasma gondii] 26 4.3
AAX77225 Falcipain 2' (Cysteine protease) [Plasmodium falcipa... 26 5.5
XP_806961 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 8.0
XP_821395 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 8.7
XP_804884 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 9.2
>M.Javanica_Scaff197g003282 on XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2264
Score = 30.4 bits (67), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 140 GKKKKRKIYR-SKCSMNNCDVIKYGYKKILRARYYSCKLCENTTQVEFF 187
GK + I+R + S+ CD+IKY K+L AR CK N V+ F
Sbjct: 48 GKLSQASIWRETVSSLKTCDIIKYEGHKLLAARGDPCKKDTNGNDVDRF 96
>M.Javanica_Scaff197g003282 on AAZ38162 RON1 (Invasion) [Toxoplasma gondii]
Length = 255
Score = 26.2 bits (56), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 9/52 (17%)
Query: 425 LAVSGEAQGSGGNGTLIIDGSFGVEEEEEENLVKQQRN-KRAHERTASEKSN 475
L+VS A +G G GV + E+E +QRN AH+ AS +S+
Sbjct: 60 LSVSSRAAANGSEG--------GVAQSEQERASDEQRNDSEAHDSVASSESS 103
>M.Javanica_Scaff197g003282 on AAX77225 Falcipain 2' (Cysteine protease) [Plasmodium
falciparum]
Length = 484
Score = 26.2 bits (56), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 185 EFFVSFINDKAQWTTIDQINEFVYEFIQKNN 215
++F++F ++K + IN+F Y FI+ NN
Sbjct: 144 DYFINFFDNKFLMNNAEHINQF-YMFIKTNN 173
>M.Javanica_Scaff197g003282 on XP_806961 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 702
Score = 25.4 bits (54), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 261 GEGEEGLVGGEPRPAAEDDEDGEIDVGGPMDMIG 294
G G+ LV GE P+ ED+ + G P ++G
Sbjct: 217 GGGDIHLVKGEVTPSTEDEPSKRVRWGRPQSLLG 250
>M.Javanica_Scaff197g003282 on XP_821395 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 768
Score = 25.4 bits (54), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 426 AVSGEAQGSGGN--GTLIIDGSFGVEEEEEENLVKQQRNKR 464
A +G A GSG G L++ G+ VEE E ++ N+R
Sbjct: 185 AATGGAPGSGAGDCGLLLVKGNVSVEESGGEKRIQWNENQR 225
>M.Javanica_Scaff197g003282 on XP_804884 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 732
Score = 25.4 bits (54), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 261 GEGEEGLVGGEPRPAAEDDEDGEIDVGGPMDMIG 294
G G+ LV GE P+ ED+ + G P ++G
Sbjct: 217 GGGDIHLVKGEVTPSTEDEPSKRVRWGRPQSLLG 250
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff16203g074050
(103 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_965997 PfEMP1 (Establishment) [Plasmodium falciparum] 25 1.4
>M.Javanica_Scaff16203g074050 on XP_965997 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2879
Score = 24.6 bits (52), Expect = 1.4, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 18/50 (36%), Gaps = 15/50 (30%)
Query: 45 WHSIECH---------------IWTYETRVAFRLSYVPFRLPYVPFRLPW 79
W +I CH ++ R LS VP L YVP L W
Sbjct: 239 WEAITCHAAHSDEYFRKSTDGVTLYFDGRCGRELSSVPTYLDYVPQFLRW 288
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff220g003595
(352 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff22314g085943
(56 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2503g023380
(413 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_812620 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.53
XP_807842 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.62
XP_809739 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.62
XP_804836 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.87
XP_827755 VSG (Establishment) [Trypanosoma brucei] 28 0.97
XP_810068 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 1.2
XP_802902 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 1.3
XP_807986 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 1.5
XP_803951 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 1.6
XP_804625 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.8
XP_805883 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.0
XP_811309 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.2
XP_804902 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.4
XP_818848 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 4.4
XP_843646 VSG (Establishment) [Trypanosoma brucei] 26 5.3
XP_001351221 CTRP (Adhesin) [Plasmodium falciparum] 26 5.4
>M.Javanica_Scaff2503g023380 on XP_812620 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1042
Score = 29.3 bits (64), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
Query: 355 GQKVPHIFVGSVPNNRFTLIKFRKIEENNKNAQIFLLQSNSNSTIKII 402
GQ VP+ F NN+FTL+ I E K I L+ N T +
Sbjct: 552 GQTVPYYFA----NNKFTLVATVSIHEVPKEGSIPLMGVRMNDTDSTV 595
>M.Javanica_Scaff2503g023380 on XP_807842 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1043
Score = 28.9 bits (63), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
Query: 355 GQKVPHIFVGSVPNNRFTLIKFRKIEENNKNAQIFLLQSNSNSTIKII 402
GQ VP+ F NN+FTL+ I E K I L+ N T +
Sbjct: 552 GQTVPYYFA----NNKFTLVATVSIHEVPKEGSIPLMGVRMNDTKGTV 595
>M.Javanica_Scaff2503g023380 on XP_809739 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1043
Score = 28.9 bits (63), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
Query: 355 GQKVPHIFVGSVPNNRFTLIKFRKIEENNKNAQIFLLQSNSNSTIKII 402
GQ VP+ F NN+FTL+ I E K I L+ N T +
Sbjct: 552 GQTVPYYFA----NNKFTLVATVSIHEVPKEGSIPLMGVRMNDTKGTV 595
>M.Javanica_Scaff2503g023380 on XP_804836 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 919
Score = 28.5 bits (62), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Query: 355 GQKVPHIFVGSVPNNRFTLIKFRKIEENNKNAQIFLLQSNSNSTIKII 402
GQ VP+ F NN+FTL+ I E ++ I L+ N T +
Sbjct: 509 GQTVPYYFA----NNKFTLVATVSIHEVPQSGSIPLMGVRMNDTSSTV 552
>M.Javanica_Scaff2503g023380 on XP_827755 VSG (Establishment) [Trypanosoma brucei]
Length = 510
Score = 28.1 bits (61), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 179 NVDDCIGNNCADRMLRWFSEEYVPTMTNFFGEFD--LEKKSELWRSEYE 225
N+DD N+ A +++W + Y T NF +F LE +S R + E
Sbjct: 351 NIDDPTDNSKAKELIKWIEKGYGETADNFNDKFKSLLEGESTPIRDKGE 399
>M.Javanica_Scaff2503g023380 on XP_810068 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1147
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Query: 355 GQKVPHIFVGSVPNNRFTLIKFRKIEENNKNAQIFLLQSNSNSTIKII 402
GQ VP+ F NN+FTL+ I E ++ I L+ N T +
Sbjct: 654 GQTVPYYFA----NNKFTLVATVSIHEVPQSGSIPLIGVRMNDTSSTV 697
>M.Javanica_Scaff2503g023380 on XP_802902 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 719
Score = 27.7 bits (60), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
Query: 355 GQKVPHIFVGSVPNNRFTLIKFRKIEENNKNAQIFLLQSNSNSTIKII 402
GQ VP+ F NN FTL+ I E ++ I L+ N T +
Sbjct: 258 GQTVPYYFA----NNEFTLVATVSIHEVPQSGSIPLMGVRMNDTSSTV 301
>M.Javanica_Scaff2503g023380 on XP_807986 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1054
Score = 27.7 bits (60), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Query: 355 GQKVPHIFVGSVPNNRFTLIKFRKIEENNKNAQIFLLQSNSNSTIKII 402
GQ VP+ F NN+FTL+ I E +++ I L+ N T +
Sbjct: 557 GQTVPYYFA----NNKFTLVATVSIHEVPQSSSIPLMGVRMNDTDGTV 600
>M.Javanica_Scaff2503g023380 on XP_803951 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 818
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Query: 355 GQKVPHIFVGSVPNNRFTLIKFRKIEENNKNAQIFLLQSNSNSTIKII 402
GQ VP+ F NN+FTL+ I E ++ I L+ N T +
Sbjct: 547 GQTVPYYFA----NNKFTLVATVSIHEVPQSGSIPLIGVRMNDTDSTV 590
>M.Javanica_Scaff2503g023380 on XP_804625 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1042
Score = 27.3 bits (59), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
Query: 355 GQKVPHIFVGSVPNNRFTLIKFRKIEENNKNAQIFLLQSNSNSTIKII 402
GQ VP+ F NN+FTL+ I E + I L+ N T +
Sbjct: 555 GQTVPYYFA----NNKFTLVATVSIHEVPQRGSIPLIGVRMNDTSSTV 598
>M.Javanica_Scaff2503g023380 on XP_805883 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1038
Score = 27.3 bits (59), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Query: 355 GQKVPHIFVGSVPNNRFTLIKFRKIEENNKNAQIFLLQSNSNSTIKII 402
GQ VP+ F NN+FTL+ I E ++ I L+ N T +
Sbjct: 547 GQTVPYYFA----NNKFTLVATVSIHEVPESGSIPLIGVRMNDTDSTV 590
>M.Javanica_Scaff2503g023380 on XP_811309 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1033
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
Query: 355 GQKVPHIFVGSVPNNRFTLIKFRKIEENNKNAQIFLLQSNSNSTIKII 402
GQ VP+ F NN FTL+ I E K I L+ N T +
Sbjct: 540 GQTVPYYFA----NNEFTLVATVSIHEVPKEDSIPLMGVRMNDTDSTV 583
>M.Javanica_Scaff2503g023380 on XP_804902 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1042
Score = 26.9 bits (58), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
Query: 355 GQKVPHIFVGSVPNNRFTLIKFRKIEENNKNAQIFLLQSNSNSTIKII 402
GQ VP+ F NN FTL+ I E K I L+ N T +
Sbjct: 550 GQTVPYYFA----NNEFTLVATVSIHEVPKEDSIPLMGVRMNDTDSTV 593
>M.Javanica_Scaff2503g023380 on XP_818848 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1053
Score = 26.2 bits (56), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Query: 355 GQKVPHIFVGSVPNNRFTLIKFRKIEENNKNAQIFLLQSNSNSTIKII 402
GQ VP+ V NN+FTL+ I E ++ I L+ N T +
Sbjct: 552 GQTVPYY----VANNKFTLVATVSIHEVPQSGSIPLMGVRMNDTKGTV 595
>M.Javanica_Scaff2503g023380 on XP_843646 VSG (Establishment) [Trypanosoma brucei]
Length = 526
Score = 25.8 bits (55), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 41 SSKEITLLFTGDTQYHFPCVSINQ--QCKERSKNCSAQTKN 79
S K+ T G+ Q C +I + +CKE+ NC Q KN
Sbjct: 396 SPKQHTSTGNGNKQQADQCEAIKKATECKEKQPNCEWQGKN 436
>M.Javanica_Scaff2503g023380 on XP_001351221 CTRP (Adhesin) [Plasmodium falciparum]
Length = 2112
Score = 25.8 bits (55), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 310 KVAERLKRTLENWNKFKKYKEIRLLFTILFAHLHQNHLVNYQ 351
K+ LK +LEN+ K K + TILF ++N N Q
Sbjct: 169 KILGALKYSLENYTKHKNIRYDAPKVTILFTDGNENSASNKQ 210
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff19138g080209
(72 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_628559 gp900 (Adhesin) [Cryptosporidium parvum] 26 0.15
XP_819568 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.5
XP_817382 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.9
XP_806556 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.9
>M.Javanica_Scaff19138g080209 on XP_628559 gp900 (Adhesin) [Cryptosporidium parvum]
Length = 1937
Score = 26.2 bits (56), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 10/74 (13%)
Query: 8 LIIFFVSLTICEAGKKKKGSTK------KEKGTSSQN----PSDLKNNLPKDPIAYDILT 57
I F L + G++ KGS KEK ++ P D K P DPI+Y
Sbjct: 1681 FIPGFNVLVDPQTGEQIKGSVPYVSLYVKEKNIVTEAAYGLPVDPKTGFPIDPISYLPFA 1740
Query: 58 RKMKTLDIWTGIYF 71
+ + +D +G YF
Sbjct: 1741 KNGELIDPISGKYF 1754
Score = 21.2 bits (43), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 39 PSDLKNNLPKDPIA 52
P DL+ LP+DP++
Sbjct: 1487 PIDLETGLPRDPVS 1500
>M.Javanica_Scaff19138g080209 on XP_819568 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 758
Score = 23.5 bits (49), Expect = 1.5, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Query: 2 KILSIILIIFFVSLTICEAGKKKKGSTKKEKGTSSQNPSDLKNNLPKD 49
++ + ++ V + C +G G+ ++ S NP+ N++PKD
Sbjct: 42 RVFTSAALLLLVVMMCCGSG----GAASADEKQSEANPNFEWNDIPKD 85
>M.Javanica_Scaff19138g080209 on XP_817382 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 836
Score = 21.9 bits (45), Expect = 5.9, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 17 ICEAGKKKKGSTKKEKGTSSQNPSDLKN 44
+C GK K+ S+ ++GT Q L+N
Sbjct: 623 LCGGGKNKEISSTWKRGTKHQVAIVLRN 650
>M.Javanica_Scaff19138g080209 on XP_806556 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 844
Score = 21.9 bits (45), Expect = 5.9, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 17 ICEAGKKKKGSTKKEKGTSSQNPSDLKN 44
+C GK K+ S+ ++GT Q L+N
Sbjct: 631 LCGGGKNKEISSTWKRGTKHQVAIVLRN 658
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff18347g078593
(216 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609450 variant erythrocyte surface antigen-1, alpha subun... 25 3.2
>M.Javanica_Scaff18347g078593 on XP_001609450 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1309
Score = 25.4 bits (54), Expect = 3.2, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 117 GESERAKREKAFHGNDESITVDDLW-DAWFQSDVREWDEKQVIDWLVNGVK 166
G++++ K H D S +D + W S +R DE Q I+W+ NG +
Sbjct: 976 GKNKKDKEVPCGHQGDPSKKGEDQYFCGWCASGLR--DEVQKIEWVFNGTE 1024
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff23206g087424
(103 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_807549 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.7
ABA06451 MSA-2a2 (Invasion) [Babesia bovis] 23 5.6
AAL15423 MSA-2b (Invasion) [Babesia bovis] 23 5.6
>M.Javanica_Scaff23206g087424 on XP_807549 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 894
Score = 23.9 bits (50), Expect = 2.7, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 60 ESGTVRLSSPSESNGXFFILAQNQ 83
++G +R+ S E NG FF +A+ Q
Sbjct: 91 KAGLLRVPSLFEMNGDFFAVAEAQ 114
>M.Javanica_Scaff23206g087424 on ABA06451 MSA-2a2 (Invasion) [Babesia bovis]
Length = 287
Score = 22.7 bits (47), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 52 GPQASPRLESGTVRLSSPSESNGXFF 77
PQ+ P+ E T L+ PS+S F
Sbjct: 246 SPQSPPQTEQSTSNLNGPSKSASFTF 271
>M.Javanica_Scaff23206g087424 on AAL15423 MSA-2b (Invasion) [Babesia bovis]
Length = 287
Score = 22.7 bits (47), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 52 GPQASPRLESGTVRLSSPSESNGXFF 77
PQ+ P+ E T L+ PS+S F
Sbjct: 246 SPQSPPQTEQSTSNLNGPSKSASFTF 271
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff22294g085900
(245 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAY44838 MSA-1 (Invasion) [Babesia bovis] 28 0.41
AAY44835 MSA-1 (Invasion) [Babesia bovis] 28 0.50
O00933 GRA7 (Establishment) [Toxoplasma gondii] 25 3.5
XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum] 25 3.6
>M.Javanica_Scaff22294g085900 on AAY44838 MSA-1 (Invasion) [Babesia bovis]
Length = 266
Score = 28.1 bits (61), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 180 QHRRKISGGGESC--SVINVYHRLKQLHQHRRKISGGGESCSVSLQQLR 226
+ +K+ G ++ SVI +YH+ K L + +++ GGE ++++++
Sbjct: 112 EEAKKVDGDFDTLMGSVIQIYHKCKALDEVAKRLFSGGEERKENIEEMK 160
Score = 25.4 bits (54), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 168 VINVYHRLKQLHQHRRKISGGGE 190
VI +YH+ K L + +++ GGE
Sbjct: 128 VIQIYHKCKALDEVAKRLFSGGE 150
>M.Javanica_Scaff22294g085900 on AAY44835 MSA-1 (Invasion) [Babesia bovis]
Length = 270
Score = 27.7 bits (60), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 22/34 (64%)
Query: 193 SVINVYHRLKQLHQHRRKISGGGESCSVSLQQLR 226
SVI +YH+ K L + +++ GGE ++++++
Sbjct: 127 SVIQIYHKCKALDEVAKRLFSGGEERKENIEEMK 160
Score = 25.4 bits (54), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 168 VINVYHRLKQLHQHRRKISGGGE 190
VI +YH+ K L + +++ GGE
Sbjct: 128 VIQIYHKCKALDEVAKRLFSGGE 150
>M.Javanica_Scaff22294g085900 on O00933 GRA7 (Establishment) [Toxoplasma gondii]
Length = 236
Score = 25.0 bits (53), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 13 NDSQV-DNTSNDKHADIKIVDMELQQDGKAALKDLLSKIKPSSFGQRRNYSRID 65
+D++V D+ ++H D K+V + +GK + KDLL K+ + G +Y D
Sbjct: 107 SDAEVTDDNIYEEHTDRKVVPR--KSEGKRSFKDLLKKLALPAVGMGASYFAAD 158
>M.Javanica_Scaff22294g085900 on XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2858
Score = 25.4 bits (54), Expect = 3.6, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 25/51 (49%)
Query: 8 DVSTSNDSQVDNTSNDKHADIKIVDMELQQDGKAALKDLLSKIKPSSFGQR 58
D++ +ND N DK+ + ++D+ L + K L + L+ K +R
Sbjct: 479 DITCTNDKGGPNKVTDKNNNTFVIDILLNDNKKKVLSNDLNDYKECDLFKR 529
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff16201g074046
(186 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_803953 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.6
XP_804892 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.6
XP_807549 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.1
XP_807986 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 6.6
XP_804331 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 7.0
XP_806267 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 7.9
>M.Javanica_Scaff16201g074046 on XP_803953 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1027
Score = 25.4 bits (54), Expect = 2.6, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 30 LRCQAGGYPDPNNCNVCKCPDALGGVECERL 60
L C +GG NV K DAL G+ E+L
Sbjct: 54 LMCCSGGTASAGESNVKKAVDALRGIGWEKL 84
>M.Javanica_Scaff16201g074046 on XP_804892 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1046
Score = 25.4 bits (54), Expect = 2.6, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 30 LRCQAGGYPDPNNCNVCKCPDALGGVECERL 60
L C +GG NV K DAL G+ E+L
Sbjct: 54 LMCCSGGTASAGESNVKKAVDALRGIGWEKL 84
>M.Javanica_Scaff16201g074046 on XP_807549 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 894
Score = 24.3 bits (51), Expect = 5.1, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 33/87 (37%)
Query: 52 LGGVECERLQPSVCGGELIATDQWQTLRSPELHDSRSQQTNLNPSFNKNVQCYWRISAPE 111
L GV+ + Q + G ++WQ L +S + P +V R
Sbjct: 599 LMGVKMKGEQEKLFGLSYEKENKWQLLCGDATTNSGELSSIGEPETTHHVVILLRNGNQS 658
Query: 112 GSHVRFRLSDGEFPCSYGCQSYVEIKH 138
++V + G+ PC+ G EI H
Sbjct: 659 SAYVDGQRVGGDAPCTLGSTDLREISH 685
>M.Javanica_Scaff16201g074046 on XP_807986 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1054
Score = 24.3 bits (51), Expect = 6.6, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 10/56 (17%)
Query: 32 CQAGGYPDPNNCNVCKCPDALGGVECERLQP----SVCGGELIATDQWQTLRSPEL 83
C GG NV K DAL G+ E+L S GG ++ ++R P L
Sbjct: 58 CGIGGTASAGEGNVKKAVDALRGIRWEKLDNWEDVSDAGG------KYGSIRGPSL 107
>M.Javanica_Scaff16201g074046 on XP_804331 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 213
Score = 23.5 bits (49), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 6/44 (13%)
Query: 44 NVCKCPDALGGVECERLQ--PSVCGGELIATDQWQTLRSPELHD 85
NV K DAL G+ E+L V G A ++ +LR P L D
Sbjct: 70 NVKKAVDALRGIGWEKLDNWEDVSG----AGGKYGSLRGPSLVD 109
>M.Javanica_Scaff16201g074046 on XP_806267 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 182
Score = 23.5 bits (49), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 6/44 (13%)
Query: 44 NVCKCPDALGGVECERLQ--PSVCGGELIATDQWQTLRSPELHD 85
NV K DAL G+ E+L V G A ++ +LR P L D
Sbjct: 70 NVKKAVDALRGIGWEKLDNWEDVSG----AGGKYGSLRGPSLVD 109
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff21154g083966
(160 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff18869g079635
(83 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_813421 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.82
XP_821388 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.5
XP_820303 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.0
XP_805613 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.1
XP_804800 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.1
XP_821293 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.6
XP_805038 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.1
XP_821381 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.7
XP_805783 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 7.8
>M.Javanica_Scaff18869g079635 on XP_813421 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 746
Score = 24.6 bits (52), Expect = 0.82, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 46 NVCYTKLLRKSSASMHLKKEKYIKSYEKANPALQISTH 83
+V + LL KS S KKE+ I YEK + ++H
Sbjct: 431 DVTASSLLYKSGKSGENKKEELIALYEKKKGGDEDTSH 468
>M.Javanica_Scaff18869g079635 on XP_821388 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 907
Score = 23.9 bits (50), Expect = 1.5, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 42 ITSYNVCYTKLLRKSSASMHLKKEKYIKSYEK 73
++ +V + LL KS+ S KKE+ I YEK
Sbjct: 416 VSDDDVAASSLLYKSAGSGDNKKEELIVLYEK 447
>M.Javanica_Scaff18869g079635 on XP_820303 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 873
Score = 23.5 bits (49), Expect = 2.0, Method: Composition-based stats.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 50 TKLLRKSSASMHLKKEKYIKSYEK 73
+ LL KS+ S KKE+ I YEK
Sbjct: 425 SSLLYKSAGSGDKKKEELIALYEK 448
>M.Javanica_Scaff18869g079635 on XP_805613 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 874
Score = 23.5 bits (49), Expect = 2.1, Method: Composition-based stats.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 50 TKLLRKSSASMHLKKEKYIKSYEK 73
+ LL KS+ S KKE+ I YEK
Sbjct: 424 SSLLYKSAGSGDKKKEELIALYEK 447
>M.Javanica_Scaff18869g079635 on XP_804800 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 940
Score = 23.5 bits (49), Expect = 2.1, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 46 NVCYTKLLRKSSASMHLKKEKYIKSYEKANPALQIST 82
+V + LL KS S KKE+ I YEK + S+
Sbjct: 429 DVTASSLLYKSGKSGENKKEELIALYEKKKGVEETSS 465
>M.Javanica_Scaff18869g079635 on XP_821293 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 786
Score = 22.3 bits (46), Expect = 4.6, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 46 NVCYTKLLRKSSASMHLKKEKYIKSYEK 73
+V + LL KS+ S + KE+ I YEK
Sbjct: 425 DVAASSLLYKSAGSGNNGKEELIALYEK 452
>M.Javanica_Scaff18869g079635 on XP_805038 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 927
Score = 22.3 bits (46), Expect = 5.1, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 5 PPPPPPPVPANFANQVPKMTESR 27
P PP PA ++ PK ESR
Sbjct: 746 PSGGAPPTPAEPKSEEPKPAESR 768
>M.Javanica_Scaff18869g079635 on XP_821381 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 934
Score = 22.3 bits (46), Expect = 5.7, Method: Composition-based stats.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 50 TKLLRKSSASMHLKKEKYIKSYEK 73
+ LL KS+ S KKE+ I YEK
Sbjct: 417 SSLLYKSAGSGDNKKEELIVLYEK 440
>M.Javanica_Scaff18869g079635 on XP_805783 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 408
Score = 21.9 bits (45), Expect = 7.8, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 46 NVCYTKLLRKSSASMHLKKEKYIKSYEKAN 75
+V + LL KS S +EK I YEK +
Sbjct: 34 DVAASSLLYKSGGSDDNNEEKLIALYEKKD 63
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2251g021675
(246 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349514 PfEMP1 (Establishment) [Plasmodium falciparum] 26 3.2
>M.Javanica_Scaff2251g021675 on XP_001349514 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2120
Score = 25.8 bits (55), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 124 VENILEKIGELICDTKELEHIGKQIENNKTIKRETKN 160
+E++ E I + D KE++HI K +E T+ + +N
Sbjct: 669 IEDLFENIKDTYGDVKEIDHIKKLLEEETTVDADNQN 705
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff18528g078962
(174 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum] 25 3.9
XP_001608668 variant erythrocyte surface antigen-1, alpha subun... 24 5.7
XP_001350595 PfEMP1 (Establishment) [Plasmodium falciparum] 24 7.5
>M.Javanica_Scaff18528g078962 on XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2238
Score = 24.6 bits (52), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 35 SGKCKTCREDDVEIDYVITMRGIYIISNRLKKKKF 69
SGK K C D + + +GIY I + K F
Sbjct: 334 SGKDKYCSGDGFDCTKTVRAKGIYAIGDDCHKCSF 368
>M.Javanica_Scaff18528g078962 on XP_001608668 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1337
Score = 24.3 bits (51), Expect = 5.7, Method: Composition-based stats.
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 106 ESINEKFFHLKGDKGNA 122
ES+ E +KGDKG+A
Sbjct: 1091 ESVGEALIKIKGDKGSA 1107
>M.Javanica_Scaff18528g078962 on XP_001350595 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2256
Score = 23.9 bits (50), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 13/61 (21%), Positives = 28/61 (45%)
Query: 8 VCISATINGVTITSPKLNTPRYVPFNSSGKCKTCREDDVEIDYVITMRGIYIISNRLKKK 67
VC +A G T+T+ + P +S C +I ++ + +++ ++ KKK
Sbjct: 146 VCYAAKFEGETLTTQHGQHQQTNPGTASQLCTVLARSFADIGDIVRGKDLFLGNDEEKKK 205
Query: 68 K 68
+
Sbjct: 206 R 206
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff17614g077065
(91 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
O00834 MIC1 (Adhesin) [Toxoplasma gondii] 23 2.0
>M.Javanica_Scaff17614g077065 on O00834 MIC1 (Adhesin) [Toxoplasma gondii]
Length = 255
Score = 23.5 bits (49), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 32 CSHCHLPITGRCISALNDQK 51
SH H P +GR I + DQ+
Sbjct: 25 ASHSHSPASGRYIQQMLDQR 44
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff19657g081228
(266 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_813123 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.13
XP_810068 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.4
XP_815479 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 5.8
>M.Javanica_Scaff19657g081228 on XP_813123 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1048
Score = 30.0 bits (66), Expect = 0.13, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Query: 144 EEDFLPSVPGSKAST-SRNQRVPESNTSGKMNGLPTENDPELLFCAETAYEA-IKESNKE 201
EE+ L VP +ST + VPE T+ ++ G +D L ET+ +A + E N+
Sbjct: 761 EENVLNLVPAVSSSTVAGGSSVPEPATATEIAGNSRSDDNAQLSEGETSQQATLNEDNES 820
Query: 202 SQR--LLQPFTPINVSKSLFTSFEVSS 226
QR +QP P + E+SS
Sbjct: 821 MQRDSEMQPQDPQPAELTEVADVEMSS 847
>M.Javanica_Scaff19657g081228 on XP_810068 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1147
Score = 26.9 bits (58), Expect = 1.4, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Query: 143 SEEDFLPSVPGSKASTSRNQRVPESNTSGKMNGLPTENDPELLFCAETAYEAIKESNKES 202
S +D +P+ P S + + P + N LP EN+ +L F ET+ +A + ES
Sbjct: 862 SVDDPVPAAPSSTDAAGSSVPEPATAAESAGNSLP-ENNVQL-FEGETSQQATPHEDNES 919
Query: 203 QRL---LQPFTPINVSKSLFTSFEVSS 226
+ +Q + + FT FE SS
Sbjct: 920 MQRDSKVQTQELPSEEPAEFTDFEGSS 946
>M.Javanica_Scaff19657g081228 on XP_815479 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1047
Score = 25.0 bits (53), Expect = 5.8, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Query: 151 VPGSKAST-SRNQRVPESNTSGKMNGLPTENDPELLFCAETAYEA-IKESNKESQR--LL 206
VP + ST + VPE T+ + G D L ET+ +A + E N+ QR L
Sbjct: 767 VPAASPSTDAAGSSVPEPATATESAGNSRSEDNAQLSEGETSQQATLNEDNESMQRDSEL 826
Query: 207 QPFTPINVSKSLFTSFEVSSIATGKKSTQKRGSS 240
Q + + T FE S+ + G + ++ G +
Sbjct: 827 QTQELQSEESTEATDFEGSAESYGTEQPEEEGGT 860
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1776g018273
(313 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350935 PfEMP1 (Establishment) [Plasmodium falciparum] 26 4.4
XP_001349738 PfEMP1 (Establishment) [Plasmodium falciparum] 25 4.9
>M.Javanica_Scaff1776g018273 on XP_001350935 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2268
Score = 25.8 bits (55), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 9/64 (14%)
Query: 242 CQPCHDFKIYNGKMRPERITQDRKCFTCEATKTSTWYRHSIPEQYLCNSCYKIQKRLKKK 301
C+PC FKIY + T+++ C K S IP L NS +K+ R+ K
Sbjct: 1420 CKPCSSFKIYCKNCKSSGGTENK----CPKGKISA---DDIPS--LGNSTHKLDMRVSDK 1470
Query: 302 TNKN 305
K+
Sbjct: 1471 NAKD 1474
>M.Javanica_Scaff1776g018273 on XP_001349738 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2162
Score = 25.4 bits (54), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Query: 49 IKDRFVLKVIEKQNNQRDSFNKNIEGYLRSIDLNPDKNTFTVEISDESKYITS 101
+KD F+ ++ QN D N G I LN NT ++ DE +ITS
Sbjct: 1861 LKDDFIYNML--QNEPNDIPNDYTSG---DIPLNTQPNTLYIDKPDEKPFITS 1908
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff20206g082249
(190 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_822021 Trans-sialidase (Invasion) [Trypanosoma cruzi] 32 0.020
XP_815842 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.6
>M.Javanica_Scaff20206g082249 on XP_822021 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 872
Score = 32.0 bits (71), Expect = 0.020, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 18 NLLIFNKLFAAENVGGEINKEEINEEKEEGDNTSSTTQISTTITTPI 64
N+L++N+ + +E + G + K ++ K EG TS TQ S T +P+
Sbjct: 694 NVLLYNRPWKSEEIAG-LAKNKVTISKSEGPKTSMDTQSSATSGSPV 739
>M.Javanica_Scaff20206g082249 on XP_815842 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 894
Score = 25.4 bits (54), Expect = 2.6, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Query: 18 NLLIFNKLFAAENVGG-EINKEEINEEKEEGDNTSSTTQISTTITTPIP 65
N+L++N+ ++E VG NK+ I +E S+ + S ++ PIP
Sbjct: 701 NVLLYNRPLSSEEVGALSPNKDSIQLLEENPSEPSTVS--SDSVVPPIP 747
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1899g019176
(133 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_804826 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.5
XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum] 23 9.0
>M.Javanica_Scaff1899g019176 on XP_804826 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 720
Score = 23.9 bits (50), Expect = 4.5, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 28/58 (48%)
Query: 74 LIKNNSDQLNKRTAQERSTEIFTRMRSICARMPRLKRKRTPKPGSPESLVAFLCSSAN 131
L+K +++ ++ + R TE +RS+ + +L + LV FL ++A+
Sbjct: 444 LLKERANEKDEAISLARLTEELNTIRSVLSTWAKLDASFSKSSTPTAGLVGFLSNAAS 501
>M.Javanica_Scaff1899g019176 on XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3346
Score = 23.1 bits (48), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 59 IYLP--EEEIDNSGDEILIKNNSDQLNK 84
+YLP E I S E L+K NSDQ+ K
Sbjct: 2384 VYLPPRREHICTSNLEYLLKGNSDQIMK 2411
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff17720g077292
(70 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2381g022539
(305 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_965997 PfEMP1 (Establishment) [Plasmodium falciparum] 31 0.095
CAD98301 Subtilase (Others) [Cryptosporidium parvum] 29 0.25
XP_001349219 PfEMP1 (Establishment) [Plasmodium falciparum] 29 0.34
XP_809580 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.3
XP_804506 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 4.1
XP_001610713 variant erythrocyte surface antigen-1, alpha subun... 25 7.4
XP_821078 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 8.7
>M.Javanica_Scaff2381g022539 on XP_965997 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2879
Score = 31.2 bits (69), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 15/106 (14%)
Query: 149 ENKRRRNLKKKYEKEIQQNDSQKLKGSLSDNG-EGTSAIKDKNYGNK-GIEAIVSKENVQ 206
E R+RN+ K KE QNDS+KL SL NG T I +KNY ++ I S + +
Sbjct: 295 EFCRKRNITLKSAKEECQNDSKKLYCSL--NGYNCTRLIPNKNYCSRDPICTPCSNKCIP 352
Query: 207 LDQGNIQQNDMIVNKNDENQLRKS----EDLTFEVNKENSKENIHT 248
D + N+ DE ++K E T+E + + S NI+T
Sbjct: 353 YDL-------WLRNRRDEFNMQKGKYENEIKTYESDNDISNSNINT 391
>M.Javanica_Scaff2381g022539 on CAD98301 Subtilase (Others) [Cryptosporidium parvum]
Length = 255
Score = 29.3 bits (64), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Query: 1 MKLIKVLIFLISDSILWSLINSVKVDKNQNELAIVEEASEDLNKILNNGAGSSVAPQIPK 60
KL+ L+ ++ ++ N+ + N +VE S DL ++ N A S P++
Sbjct: 7 FKLLPYLLVFFQKRVICNIFNTSSISIN-----VVEGRSSDLELVIKNPADQSATPEVQV 61
Query: 61 YEETLKP 67
E+ P
Sbjct: 62 VEKVFSP 68
>M.Javanica_Scaff2381g022539 on XP_001349219 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2595
Score = 29.3 bits (64), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 20/116 (17%)
Query: 136 CRKY--YHKNKERILENKRRRNLKKKYEKEIQQNDS----------------QKLKGSLS 177
CRKY + K K + E +++ K+K + E N + QKL+
Sbjct: 1306 CRKYKNWIKGKRKEFEEQKQEYSKQKTDAEGNNNGNEFYTKLEECPEVKDFLQKLEPCKK 1365
Query: 178 DNGEGTSAIKD--KNYGNKGIEAIVSKENVQLDQGNIQQNDMIVNKNDENQLRKSE 231
DNGEG + +D + +G+K S+ + G + D VN N +N + +E
Sbjct: 1366 DNGEGKTIFQDEAEAFGHKKYCDPCSQFKIDCKNGKCKSGDTKVNCNRKNTIDATE 1421
>M.Javanica_Scaff2381g022539 on XP_809580 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 776
Score = 26.6 bits (57), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 9/36 (25%)
Query: 161 EKEIQQNDSQKLKGSLSDN---------GEGTSAIK 187
EK IQ N++Q+L G+ SD+ G G S IK
Sbjct: 230 EKRIQWNENQRLTGTFSDDEHKCLTQLIGGGGSGIK 265
>M.Javanica_Scaff2381g022539 on XP_804506 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1012
Score = 25.8 bits (55), Expect = 4.1, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 239 KENSKENIHTSVNEEGNSNTNKESVT-RPH 267
++ SK+ + +VN EG+ TN + T RPH
Sbjct: 227 RKESKQALLATVNFEGSERTNNSTHTHRPH 256
>M.Javanica_Scaff2381g022539 on XP_001610713 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1294
Score = 25.0 bits (53), Expect = 7.4, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 24/165 (14%)
Query: 35 VEEASEDLNKILNNGAGSSVAPQIPKYEETLKPKQKITKKNSIANNKEEKKEKRKEYDRN 94
V E LNK L G+G SVA ++ E K + + + + E KK++ E +
Sbjct: 621 VAEMGNKLNK-LPLGSGESVAMKVKTLLE--KIGEVVVQLGNAQEALEGKKKEAIEGVKG 677
Query: 95 WYN--KNKVKKTKYNQIYYQEKIKENLKEKRKSAKYK------------------EISKK 134
K +++ K E+ K+ LK+K + A K + K
Sbjct: 678 ALGEAKRELEGAKNGLNGKLEEAKDGLKDKLQDAMTKLGELTNGGGILVDLLGSNGLEKA 737
Query: 135 ACRKYYHKNKERILENKRR-RNLKKKYEKEIQQNDSQKLKGSLSD 178
A + Y K +I E + R++ ++ +KE+ ++S L GSLS+
Sbjct: 738 AEKGEYDPGKNKISEAIHKVRSVMEEIQKELGVSNSSYLNGSLSE 782
>M.Javanica_Scaff2381g022539 on XP_821078 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 940
Score = 24.6 bits (52), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 10/18 (55%), Positives = 16/18 (88%)
Query: 162 KEIQQNDSQKLKGSLSDN 179
K+IQ N++Q+L G+LSD+
Sbjct: 211 KKIQWNENQRLAGTLSDD 228
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1754g018115
(129 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349219 PfEMP1 (Establishment) [Plasmodium falciparum] 29 0.081
XP_001349514 PfEMP1 (Establishment) [Plasmodium falciparum] 28 0.10
XP_001351318 PfEMP1 (Establishment) [Plasmodium falciparum] 28 0.21
XP_001350409 PfEMP1 (Establishment) [Plasmodium falciparum] 28 0.22
XP_001351079 PfEMP1 (Establishment) [Plasmodium falciparum] 27 0.28
XP_001351564 PfEMP1 (Establishment) [Plasmodium falciparum] 27 0.38
XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum] 27 0.46
XP_001351080 PfEMP1 (Establishment) [Plasmodium falciparum] 26 0.95
XP_001347690 PfEMP1 (Establishment) [Plasmodium falciparum] 26 1.0
XP_001349036 PfEMP1 (Establishment) [Plasmodium falciparum] 25 1.4
XP_001349438 PfEMP1 (Establishment) [Plasmodium falciparum] 25 1.7
XP_001347288 PfEMP1 (Establishment) [Plasmodium falciparum] 25 1.8
XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum] 25 1.9
XP_001349033 PfEMP1 (Establishment) [Plasmodium falciparum] 25 1.9
XP_001349737 PfEMP1 (Establishment) [Plasmodium falciparum] 25 1.9
XP_001349738 PfEMP1 (Establishment) [Plasmodium falciparum] 25 1.9
XP_001351515 PfEMP1 (Establishment) [Plasmodium falciparum] 25 1.9
XP_001351517 PfEMP1 (Establishment) [Plasmodium falciparum] 25 1.9
XP_001351514 PfEMP1 (Establishment) [Plasmodium falciparum] 25 2.1
XP_001351319 PfEMP1 (Establishment) [Plasmodium falciparum] 25 2.1
XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum] 25 2.1
XP_001349035 PfEMP1 (Establishment) [Plasmodium falciparum] 25 2.2
XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum] 25 2.2
XP_001347691 PfEMP1 (Establishment) [Plasmodium falciparum] 25 2.3
XP_001350935 PfEMP1 (Establishment) [Plasmodium falciparum] 25 2.3
XP_001351877 PfEMP1 (Establishment) [Plasmodium falciparum] 25 2.4
XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum] 24 3.3
XP_811916 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.5
XP_001351435 PfEMP1 (Establishment) [Plasmodium falciparum] 23 5.1
>M.Javanica_Scaff1754g018115 on XP_001349219 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2595
Score = 28.9 bits (63), Expect = 0.081, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 3 DDFAPSGDGLPADDNWGATDVPGGQGDMQMTTIDFPEIKLFGKWSLSDIEVNDPSLVDY- 61
D+ P P D T +P G + + +I F +K K ++ + V + DY
Sbjct: 2078 DELLPIQADQPFDPTILQTTIPFGIA-LALGSIAFLFLKKKTKSTIDLLRVINIPKSDYD 2136
Query: 62 IAVKDKSAKYLPHSAGRYQIKRF 84
I K +Y+P+++G+Y+ KR+
Sbjct: 2137 IPTKLSPNRYIPYTSGKYRGKRY 2159
>M.Javanica_Scaff1754g018115 on XP_001349514 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2120
Score = 28.5 bits (62), Expect = 0.10, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 13 PADDNWGATDVPGGQGDMQMTTIDFPEIKLFGKWSLSDIEVNDPSLVDY-IAVKDKSAKY 71
P D T +P G + +T+I F +K K ++ + V + DY I K +Y
Sbjct: 1641 PLDPTILQTTIPFGIA-IALTSIVFLFLKKKTKSTIDLLRVINIPKSDYDIPTKLSPNRY 1699
Query: 72 LPHSAGRYQIKRF 84
+P+++G+Y+ KR+
Sbjct: 1700 IPYTSGKYRGKRY 1712
>M.Javanica_Scaff1754g018115 on XP_001351318 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2169
Score = 27.7 bits (60), Expect = 0.21, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 7 PSGDGLPA----DDNWGATDVPGGQGDMQMTTIDFPEIKLFGKWSLSDIEVNDPSLVDY- 61
P D LPA D T +P G + + +I F +K K + V + DY
Sbjct: 1705 PPADPLPAREPFDPTILQTTIPFGVA-LALGSIAFLFLKKKTKSPVDLFSVINIPKSDYD 1763
Query: 62 IAVKDKSAKYLPHSAGRYQIKRF 84
I K +Y+P+++G+Y+ KR+
Sbjct: 1764 IPTKLSPNRYIPYTSGKYRGKRY 1786
>M.Javanica_Scaff1754g018115 on XP_001350409 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2223
Score = 27.7 bits (60), Expect = 0.22, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 2 ADDFAPSGDGLPADDNWG----ATDVPGGQGDMQMTTIDFPEIKLFGKWSLSDIEVNDPS 57
A D AP PAD + T +P G + + +I F +K K ++ + V +
Sbjct: 1740 APDVAPPARA-PADQPFDPTILQTTIPFGIA-LALGSIAFLFLKKKTKSTIDLLRVINIP 1797
Query: 58 LVDY-IAVKDKSAKYLPHSAGRYQIKRF 84
DY I K +Y+P+++G+Y+ KR+
Sbjct: 1798 KSDYDIPTKLSPNRYIPYTSGKYRGKRY 1825
>M.Javanica_Scaff1754g018115 on XP_001351079 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2203
Score = 27.3 bits (59), Expect = 0.28, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 21 TDVPGGQGDMQMTTIDFPEIKLFGKWSLSDIEVNDPSLVDY-IAVKDKSAKYLPHSAGRY 79
T +P G + +T+I F +K L V D DY I K +Y+P+++G+Y
Sbjct: 1750 TTIPFGIA-LALTSIAFLFLKKKTHAPLDLFSVIDIPKSDYDIPTKLSPNRYIPYTSGKY 1808
Query: 80 QIKRF 84
+ KR+
Sbjct: 1809 RGKRY 1813
>M.Javanica_Scaff1754g018115 on XP_001351564 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2207
Score = 26.9 bits (58), Expect = 0.38, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 20 ATDVPGGQGDMQMTTIDFPEIKLFGKWSLSDIEVNDPSLVDY-IAVKDKSAKYLPHSAGR 78
AT +P G + +I F +K K ++ + V + DY I K +Y+P+++G+
Sbjct: 1774 ATTIPFGIA-FALGSIAFLFLKKKTKSTIDLLRVINIPKSDYDIPTKLSPNRYIPYTSGK 1832
Query: 79 YQIKRF 84
Y+ KR+
Sbjct: 1833 YRGKRY 1838
>M.Javanica_Scaff1754g018115 on XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2980
Score = 26.6 bits (57), Expect = 0.46, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 14 ADDNWGATDVPGGQGDMQMTTIDFPEIKLFGKWSLSDIEVNDPSLVDY-IAVKDKSAKYL 72
+D++ T +P G + + +I F +K K ++ + V + DY I K +Y+
Sbjct: 2519 SDESILHTTIPFGVA-LALGSIAFLFLKKKTKSTIDLLRVINIPKSDYNIPTKLSPNRYI 2577
Query: 73 PHSAGRYQIKRF 84
P+++G+Y+ KR+
Sbjct: 2578 PYTSGKYRGKRY 2589
>M.Javanica_Scaff1754g018115 on XP_001351080 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2209
Score = 25.8 bits (55), Expect = 0.95, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 12 LPADDNWG--ATDVPGGQGDMQMTTIDFPEIKLFGKWSLSDIEVNDPSLVDY-IAVKDKS 68
LP+D+ T +P G + +T+I +K K ++ + V + DY + K
Sbjct: 1743 LPSDNTSDILKTTIPFGIA-LALTSIALLFLKKKTKSTIDLLRVINIPKSDYGMPTKLSP 1801
Query: 69 AKYLPHSAGRYQIKRF 84
+Y+P+++G+Y+ KR+
Sbjct: 1802 NRYIPYTSGKYRGKRY 1817
>M.Javanica_Scaff1754g018115 on XP_001347690 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 25.8 bits (55), Expect = 1.0, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 60 DY-IAVKDKSAKYLPHSAGRYQIKRF 84
DY I K +Y+P+++G+Y+ KR+
Sbjct: 1823 DYDIPTKRSPNRYIPYTSGKYRGKRY 1848
>M.Javanica_Scaff1754g018115 on XP_001349036 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2192
Score = 25.4 bits (54), Expect = 1.4, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 12 LPADDNWG--ATDVPGGQGDMQMTTIDFPEIKLFGKWSLSDIEVNDPSLVDY-IAVKDKS 68
LP+D+ T +P G + +T+I +K K + V + DY I K
Sbjct: 1752 LPSDNTSDILKTTIPFGIA-LALTSIALLFLKKKTKHPVDLFSVINIPKSDYDIPTKLSP 1810
Query: 69 AKYLPHSAGRYQIKRF 84
+Y+P+++G+Y+ KR+
Sbjct: 1811 NRYIPYTSGKYRGKRY 1826
>M.Javanica_Scaff1754g018115 on XP_001349438 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2265
Score = 25.0 bits (53), Expect = 1.7, Method: Composition-based stats.
Identities = 8/23 (34%), Positives = 16/23 (69%)
Query: 62 IAVKDKSAKYLPHSAGRYQIKRF 84
I K +Y+P+++G+Y+ KR+
Sbjct: 1817 IPTKRSPNRYIPYTSGKYRGKRY 1839
>M.Javanica_Scaff1754g018115 on XP_001347288 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2241
Score = 25.0 bits (53), Expect = 1.8, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 13 PADDNWGAT----DVPGGQGDMQMTTIDFPEIKLFGKWSLSDI-EVNDPSLVDY-IAVKD 66
PAD+ + T +P G + + +I F +K K S+ ++ ++ DY I K
Sbjct: 1770 PADETFDPTILQTTIPLGIA-LALGSIAFLFLKKKTKASVGNLFQILQIPKSDYDIPTKL 1828
Query: 67 KSAKYLPHSAGRYQIKRF 84
+Y+P+++G+Y+ KR+
Sbjct: 1829 SPNRYIPYTSGKYRGKRY 1846
>M.Javanica_Scaff1754g018115 on XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1711
Score = 25.0 bits (53), Expect = 1.9, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 60 DY-IAVKDKSAKYLPHSAGRYQIKRF 84
DY I K +Y+P+++G+Y+ KR+
Sbjct: 1287 DYDIPTKLSPNRYIPYTSGKYRGKRY 1312
>M.Javanica_Scaff1754g018115 on XP_001349033 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2064
Score = 25.0 bits (53), Expect = 1.9, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 60 DY-IAVKDKSAKYLPHSAGRYQIKRF 84
DY I K +Y+P+++G+Y+ KR+
Sbjct: 1669 DYDIPTKLSPNRYIPYTSGKYRGKRY 1694
>M.Javanica_Scaff1754g018115 on XP_001349737 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2199
Score = 25.0 bits (53), Expect = 1.9, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 60 DY-IAVKDKSAKYLPHSAGRYQIKRF 84
DY I K +Y+P+++G+Y+ KR+
Sbjct: 1809 DYDIPTKLSPNRYIPYTSGKYRGKRY 1834
>M.Javanica_Scaff1754g018115 on XP_001349738 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2162
Score = 25.0 bits (53), Expect = 1.9, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 60 DY-IAVKDKSAKYLPHSAGRYQIKRF 84
DY I K +Y+P+++G+Y+ KR+
Sbjct: 1744 DYDIPTKLSPNRYIPYTSGKYRGKRY 1769
>M.Javanica_Scaff1754g018115 on XP_001351515 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2181
Score = 25.0 bits (53), Expect = 1.9, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 60 DY-IAVKDKSAKYLPHSAGRYQIKRF 84
DY I K +Y+P+++G+Y+ KR+
Sbjct: 1781 DYDIPTKLSPNRYIPYTSGKYRGKRY 1806
>M.Javanica_Scaff1754g018115 on XP_001351517 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2193
Score = 25.0 bits (53), Expect = 1.9, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 60 DY-IAVKDKSAKYLPHSAGRYQIKRF 84
DY I K +Y+P+++G+Y+ KR+
Sbjct: 1787 DYDIPTKLSPNRYIPYTSGKYRGKRY 1812
>M.Javanica_Scaff1754g018115 on XP_001351514 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2201
Score = 24.6 bits (52), Expect = 2.1, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 60 DY-IAVKDKSAKYLPHSAGRYQIKRF 84
DY I K +Y+P+++G+Y+ KR+
Sbjct: 1801 DYDIPTKLSPNRYIPYTSGKYRGKRY 1826
>M.Javanica_Scaff1754g018115 on XP_001351319 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2646
Score = 24.6 bits (52), Expect = 2.1, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 60 DY-IAVKDKSAKYLPHSAGRYQIKRF 84
DY I K +Y+P+++G+Y+ KR+
Sbjct: 2210 DYDIPTKLSPNRYIPYTSGKYRGKRY 2235
>M.Javanica_Scaff1754g018115 on XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2238
Score = 24.6 bits (52), Expect = 2.1, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 60 DY-IAVKDKSAKYLPHSAGRYQIKRF 84
DY I K +Y+P+++G+Y+ KR+
Sbjct: 1778 DYDIPTKLSPNRYIPYTSGKYRGKRY 1803
>M.Javanica_Scaff1754g018115 on XP_001349035 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2239
Score = 24.6 bits (52), Expect = 2.2, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 60 DY-IAVKDKSAKYLPHSAGRYQIKRF 84
DY I K +Y+P+++G+Y+ KR+
Sbjct: 1781 DYDIPTKLSPNRYIPYTSGKYRGKRY 1806
>M.Javanica_Scaff1754g018115 on XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2264
Score = 24.6 bits (52), Expect = 2.2, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 60 DY-IAVKDKSAKYLPHSAGRYQIKRF 84
DY I K +Y+P+++G+Y+ KR+
Sbjct: 1815 DYDIPTKLSPNRYIPYTSGKYRGKRY 1840
>M.Javanica_Scaff1754g018115 on XP_001347691 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2182
Score = 24.6 bits (52), Expect = 2.3, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 60 DY-IAVKDKSAKYLPHSAGRYQIKRF 84
DY I K +Y+P+++G+Y+ KR+
Sbjct: 1791 DYDIPTKLSPNRYIPYTSGKYRGKRY 1816
>M.Javanica_Scaff1754g018115 on XP_001350935 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2268
Score = 24.6 bits (52), Expect = 2.3, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 60 DY-IAVKDKSAKYLPHSAGRYQIKRF 84
DY I K +Y+P+++G+Y+ KR+
Sbjct: 1844 DYDIPTKLSPNRYIPYTSGKYRGKRY 1869
>M.Javanica_Scaff1754g018115 on XP_001351877 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2270
Score = 24.6 bits (52), Expect = 2.4, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 60 DY-IAVKDKSAKYLPHSAGRYQIKRF 84
DY I K +Y+P+++G+Y+ KR+
Sbjct: 1837 DYDIPTKLSPNRYIPYTSGKYRGKRY 1862
>M.Javanica_Scaff1754g018115 on XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2178
Score = 24.3 bits (51), Expect = 3.3, Method: Composition-based stats.
Identities = 8/23 (34%), Positives = 16/23 (69%)
Query: 62 IAVKDKSAKYLPHSAGRYQIKRF 84
I K +Y+P+++G+Y+ KR+
Sbjct: 1715 IPTKLSPNRYIPYTSGKYRGKRY 1737
>M.Javanica_Scaff1754g018115 on XP_811916 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 685
Score = 23.9 bits (50), Expect = 4.5, Method: Composition-based stats.
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 96 VCSMMMHGRNNGKKLM 111
VCSM+++ +NG+K M
Sbjct: 257 VCSMIIYSTDNGEKWM 272
>M.Javanica_Scaff1754g018115 on XP_001351435 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2209
Score = 23.5 bits (49), Expect = 5.1, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 7/47 (14%)
Query: 38 PEIKLFGKWSLSDIEVNDPSLVDYIAVKDKSAKYLPHSAGRYQIKRF 84
P + LF S+ +I ND + +K K+ +Y+P+S+G+Y+ K +
Sbjct: 1769 PRVDLF---SVMEIPQNDYGMP---TLKSKN-RYVPYSSGKYRGKTY 1808
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2226g021511
(96 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum] 23 4.2
XP_818092 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.6
XP_818477 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.6
XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum] 23 5.7
XP_001609667 variant erythrocyte surface antigen-1, alpha subun... 22 7.6
>M.Javanica_Scaff2226g021511 on XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1711
Score = 23.1 bits (48), Expect = 4.2, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 16 ILYLNSAFSYTYISYHKPLNKEQQESERIQSIVSKCYQNSCRQ 58
+ Y S +S+ Y S LN+ + ER++S ++ CR+
Sbjct: 585 VYYPISYYSFFYGSIIDMLNESIEWRERLKSCINDAKLGKCRK 627
>M.Javanica_Scaff2226g021511 on XP_818092 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 884
Score = 22.7 bits (47), Expect = 4.6, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 29 SYHKPLNKEQQESERIQSIVSKCYQNSCRQWVLEC 63
S H PL + S ++ Y N+ ++W+L C
Sbjct: 597 STHIPLMGAKTNSAENTVLLGLSYSNNEKKWMLLC 631
>M.Javanica_Scaff2226g021511 on XP_818477 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 869
Score = 22.7 bits (47), Expect = 5.6, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 31 HKPLNKEQQESERIQSIVSKCYQNSCRQWVLEC 63
H PL + +V Y+N ++W+L C
Sbjct: 579 HIPLIGAKMNDSEKTVLVGLSYKNKEKKWILLC 611
>M.Javanica_Scaff2226g021511 on XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2264
Score = 22.7 bits (47), Expect = 5.7, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Query: 4 ISFSIFTLLIVMILYLNSAFSYTYISYHKPL-----NKEQQESE 42
I + +T V+I+Y F Y+Y K + NKEQ SE
Sbjct: 1498 IDLNEYTTFKVLIVYWLEDFLYSYYILKKKIELCTQNKEQTCSE 1541
>M.Javanica_Scaff2226g021511 on XP_001609667 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1303
Score = 22.3 bits (46), Expect = 7.6, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 29 SYHKPLNKEQQESERIQSIVSKCYQNSCRQWVLECHWFCDAIRGLKDYER 78
SY P N E E+ N ++ +CH F D++ G+ D R
Sbjct: 1155 SYGNPFNLEGYRQEKKGEGDYSIMDNR-QKGTKKCHQFLDSLNGVIDKNR 1203
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2323g022153
(59 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001610721 variant erythrocyte surface antigen-1, alpha subun... 25 0.17
XP_001609315 variant erythrocyte surface antigen-1, alpha subun... 24 0.71
AAK94670 SUB1 (Protease) [Toxoplasma gondii] 23 1.6
XP_829778 VSG (Establishment) [Trypanosoma brucei] 22 3.2
XP_001608670 variant erythrocyte surface antigen-1, alpha subun... 22 4.2
XP_001609751 variant erythrocyte surface antigen-1, alpha subun... 22 4.5
XP_828095 VSG (Establishment) [Trypanosoma brucei] 22 4.8
XP_001609167 variant erythrocyte surface antigen-1, alpha subun... 22 5.0
XP_001611365 variant erythrocyte surface antigen-1, alpha subun... 21 6.5
>M.Javanica_Scaff2323g022153 on XP_001610721 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1331
Score = 25.4 bits (54), Expect = 0.17, Method: Composition-based stats.
Identities = 8/12 (66%), Positives = 10/12 (83%)
Query: 25 KNIQSNDPCKGC 36
K++Q NDPCK C
Sbjct: 152 KDVQKNDPCKDC 163
>M.Javanica_Scaff2323g022153 on XP_001609315 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1338
Score = 23.9 bits (50), Expect = 0.71, Method: Composition-based stats.
Identities = 11/20 (55%), Positives = 13/20 (65%), Gaps = 3/20 (15%)
Query: 25 KNIQSNDPCKGC-C--WGVD 41
K++ NDPCK C C W VD
Sbjct: 161 KDVTPNDPCKDCGCMKWKVD 180
>M.Javanica_Scaff2323g022153 on AAK94670 SUB1 (Protease) [Toxoplasma gondii]
Length = 255
Score = 22.7 bits (47), Expect = 1.6, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 19 VNEINGKNIQSNDPCKGCCWGVDTI 43
V +N + SNDP WG+D +
Sbjct: 208 VQSVNTSSKGSNDPLLDRLWGMDAL 232
>M.Javanica_Scaff2323g022153 on XP_829778 VSG (Establishment) [Trypanosoma brucei]
Length = 493
Score = 21.9 bits (45), Expect = 3.2, Method: Composition-based stats.
Identities = 8/16 (50%), Positives = 9/16 (56%)
Query: 44 TCDLKKTRCDCNTCCK 59
TC+ K T DC CK
Sbjct: 415 TCETKGTGADCKDGCK 430
>M.Javanica_Scaff2323g022153 on XP_001608670 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1320
Score = 21.6 bits (44), Expect = 4.2, Method: Composition-based stats.
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 25 KNIQSNDPCKGC 36
K+++ NDPC C
Sbjct: 148 KDVRRNDPCTDC 159
>M.Javanica_Scaff2323g022153 on XP_001609751 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1298
Score = 21.6 bits (44), Expect = 4.5, Method: Composition-based stats.
Identities = 6/11 (54%), Positives = 9/11 (81%)
Query: 26 NIQSNDPCKGC 36
++ +NDPCK C
Sbjct: 116 DVTANDPCKEC 126
>M.Javanica_Scaff2323g022153 on XP_828095 VSG (Establishment) [Trypanosoma brucei]
Length = 517
Score = 21.6 bits (44), Expect = 4.8, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 10/21 (47%)
Query: 39 GVDTITCDLKKTRCDCNTCCK 59
G D C KK + DC CK
Sbjct: 467 GADAKKCSDKKKQEDCKDGCK 487
>M.Javanica_Scaff2323g022153 on XP_001609167 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1317
Score = 21.6 bits (44), Expect = 5.0, Method: Composition-based stats.
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 25 KNIQSNDPCKGC 36
K+++ NDPC C
Sbjct: 150 KDVRRNDPCTDC 161
>M.Javanica_Scaff2323g022153 on XP_001611365 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1335
Score = 21.2 bits (43), Expect = 6.5, Method: Composition-based stats.
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 25 KNIQSNDPCKGC 36
K+++ N PCK C
Sbjct: 148 KDVKENTPCKDC 159
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff244g003910
(103 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAK07771 MSA-1 (Invasion) [Babesia bovis] 24 1.9
AAK07772 MSA-1 (Invasion) [Babesia bovis] 24 1.9
XP_954179 TashAT2 (Establishment) [Theileria annulata] 23 6.3
>M.Javanica_Scaff244g003910 on AAK07771 MSA-1 (Invasion) [Babesia bovis]
Length = 334
Score = 24.3 bits (51), Expect = 1.9, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 23 KPIRVEVKIKDDWKGKREFIYLKNVELKERFVLIMIVNQNNKIGNFFFKKNGSFFKIEVN 82
K ++ E ++ ++ + K E + ++V+ E V VN FFF + F+K+ ++
Sbjct: 152 KSLKWEAQLTEEDRKKAEDYFKQHVQKTETNV---DVNSMVAFLKFFFHQESYFYKLAIS 208
Query: 83 QDN 85
D+
Sbjct: 209 YDD 211
>M.Javanica_Scaff244g003910 on AAK07772 MSA-1 (Invasion) [Babesia bovis]
Length = 339
Score = 24.3 bits (51), Expect = 1.9, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 23 KPIRVEVKIKDDWKGKREFIYLKNVELKERFVLIMIVNQNNKIGNFFFKKNGSFFKIEVN 82
K ++ E ++ ++ + K E + ++V+ E V VN FFF + F+K+ ++
Sbjct: 152 KSLKWEAQLTEEDRKKAEDYFKQHVQKTETNV---DVNSMVAFLKFFFHQESYFYKLAIS 208
Query: 83 QDN 85
D+
Sbjct: 209 YDD 211
>M.Javanica_Scaff244g003910 on XP_954179 TashAT2 (Establishment) [Theileria annulata]
Length = 1161
Score = 22.7 bits (47), Expect = 6.3, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 22/48 (45%)
Query: 50 KERFVLIMIVNQNNKIGNFFFKKNGSFFKIEVNQDNVFIIELNNASKY 97
+E VL+ + N +F K G F I++ + + L+N KY
Sbjct: 86 EEALVLVNLENAVTSPEKYFSKGQGPFVPIDIENFELKLECLSNKPKY 133
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2117g020785
(599 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAW78154 TRAP (Invasion) [Plasmodium falciparum] 30 0.27
AAA29776 TRAP (Invasion) [Plasmodium falciparum] 30 0.28
AAA29773 TRAP (Invasion) [Plasmodium falciparum] 30 0.31
AAW78135 TRAP (Invasion) [Plasmodium falciparum] 30 0.34
AAW78157 TRAP (Invasion) [Plasmodium falciparum] 30 0.46
AAW78164 TRAP (Invasion) [Plasmodium falciparum] 30 0.47
AAW78158 TRAP (Invasion) [Plasmodium falciparum] 30 0.48
XP_808611 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.49
AAW78175 TRAP (Invasion) [Plasmodium falciparum] 30 0.50
AAW78174 TRAP (Invasion) [Plasmodium falciparum] 30 0.53
AAW78173 TRAP (Invasion) [Plasmodium falciparum] 29 0.74
AAQ11892 TRAP (Invasion) [Plasmodium falciparum] 29 0.75
AAW78146 TRAP (Invasion) [Plasmodium falciparum] 29 0.76
AAQ11891 TRAP (Invasion) [Plasmodium falciparum] 29 0.78
AAW78130 TRAP (Invasion) [Plasmodium falciparum] 29 0.78
AAQ11895 TRAP (Invasion) [Plasmodium falciparum] 29 0.79
AAQ11894 TRAP (Invasion) [Plasmodium falciparum] 29 0.81
AAW78137 TRAP (Invasion) [Plasmodium falciparum] 29 0.83
AAW78139 TRAP (Invasion) [Plasmodium falciparum] 29 0.85
AAA29770 TRAP (Invasion) [Plasmodium falciparum] 29 0.87
AAW78172 TRAP (Invasion) [Plasmodium falciparum] 29 0.90
AAA29777 TRAP (Invasion) [Plasmodium falciparum] 29 0.91
AAW78138 TRAP (Invasion) [Plasmodium falciparum] 29 0.93
AAW78136 TRAP (Invasion) [Plasmodium falciparum] 29 0.95
AAW78132 TRAP (Invasion) [Plasmodium falciparum] 29 0.96
AAW78176 TRAP (Invasion) [Plasmodium falciparum] 29 0.97
AAA29772 TRAP (Invasion) [Plasmodium falciparum] 29 0.98
AAW78162 TRAP (Invasion) [Plasmodium falciparum] 29 0.98
AAL38220 PfNBP1 (Adhesin) [Plasmodium falciparum] 29 1.00
AAL38222 PfNBP1 (Adhesin) [Plasmodium falciparum] 29 1.00
AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum] 29 1.0
AAA29778 TRAP (Invasion) [Plasmodium falciparum] 29 1.0
AAL38218 PfNBP1 (Adhesin) [Plasmodium falciparum] 29 1.0
AAW78177 TRAP (Invasion) [Plasmodium falciparum] 29 1.0
AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum] 29 1.0
AAW78161 TRAP (Invasion) [Plasmodium falciparum] 29 1.1
AAW78150 TRAP (Invasion) [Plasmodium falciparum] 28 1.1
AAW78147 TRAP (Invasion) [Plasmodium falciparum] 28 1.1
AAW78141 TRAP (Invasion) [Plasmodium falciparum] 28 1.1
AAW78152 TRAP (Invasion) [Plasmodium falciparum] 28 1.2
AAW78160 TRAP (Invasion) [Plasmodium falciparum] 28 1.2
AAW78134 TRAP (Invasion) [Plasmodium falciparum] 28 1.3
AAW78171 TRAP (Invasion) [Plasmodium falciparum] 28 1.3
AAW78148 TRAP (Invasion) [Plasmodium falciparum] 28 1.3
AAW78131 TRAP (Invasion) [Plasmodium falciparum] 28 1.5
AAW78165 TRAP (Invasion) [Plasmodium falciparum] 28 1.7
AAW78151 TRAP (Invasion) [Plasmodium falciparum] 28 1.7
AAW78167 TRAP (Invasion) [Plasmodium falciparum] 28 1.8
AAW78144 TRAP (Invasion) [Plasmodium falciparum] 28 1.9
AAW78149 TRAP (Invasion) [Plasmodium falciparum] 28 1.9
AAW78156 TRAP (Invasion) [Plasmodium falciparum] 28 1.9
AAW78169 TRAP (Invasion) [Plasmodium falciparum] 28 1.9
AAW78166 TRAP (Invasion) [Plasmodium falciparum] 28 2.0
XP_818396 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 2.0
AAA29775 TRAP (Invasion) [Plasmodium falciparum] 28 2.1
XP_804821 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 2.1
AAW78168 TRAP (Invasion) [Plasmodium falciparum] 28 2.2
AAW78153 TRAP (Invasion) [Plasmodium falciparum] 27 2.5
AAW78163 TRAP (Invasion) [Plasmodium falciparum] 27 2.7
AAW78159 TRAP (Invasion) [Plasmodium falciparum] 27 2.7
AAW78133 TRAP (Invasion) [Plasmodium falciparum] 27 2.8
AAA29774 TRAP (Invasion) [Plasmodium falciparum] 27 3.1
AAA29771 TRAP (Invasion) [Plasmodium falciparum] 27 3.2
XP_807549 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 3.7
AAM47174 Rh4 (Adhesin) [Plasmodium falciparum] 27 4.3
AAM47175 Rh4 (Adhesin) [Plasmodium falciparum] 27 4.3
AAM47192 Rh4 (Adhesin) [Plasmodium falciparum] 27 4.3
XP_806966 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 7.0
XP_815706 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 7.6
XP_815707 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 7.6
XP_813677 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 8.1
XP_816720 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 8.2
>M.Javanica_Scaff2117g020785 on AAW78154 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 30.4 bits (67), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 38 PRGRGGEYRYKYSEEHVYEEEEPEKPKPKPEEPKPESKKDWTL 80
PR RG + + EE++ + P++P P PEE K E++ + L
Sbjct: 304 PRPRGDNFAVEKPEENIIDNN-PQEPSPNPEEGKGENRNGFDL 345
>M.Javanica_Scaff2117g020785 on AAA29776 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 30.4 bits (67), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 37 RPRGRGGEYRYKYSEEHVYEEEEPEKPKPKPEEPKPESKKDWTL 80
+PR RG + + EE++ + P++P P PEE K E+ K + L
Sbjct: 303 QPRPRGDNFAVEKPEENIIDNN-PQEPSPNPEEGKGENPKGFDL 345
>M.Javanica_Scaff2117g020785 on AAA29773 TRAP (Invasion) [Plasmodium falciparum]
Length = 568
Score = 30.4 bits (67), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 37 RPRGRGGEYRYKYSEEHVYEEEEPEKPKPKPEEPKPESKKDWTL 80
+PR RG + + EH+ + P++P P PEE K E+ + L
Sbjct: 303 QPRPRGDNFAVEKPNEHIIDNN-PQEPSPNPEEGKGENPNGFDL 345
>M.Javanica_Scaff2117g020785 on AAW78135 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 30.4 bits (67), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 38 PRGRGGEYRYKYSEEHVYEEEEPEKPKPKPEEPKPESKKDWTL 80
PR RG + ++ +E++ + P++P P PEE K E++ + L
Sbjct: 304 PRPRGDNFAFEKPKENIIDNN-PQEPSPNPEEGKGENRNGFDL 345
>M.Javanica_Scaff2117g020785 on AAW78157 TRAP (Invasion) [Plasmodium falciparum]
Length = 557
Score = 30.0 bits (66), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 37 RPRGRGGEYRYKYSEEHVYEEEEPEKPKPKPEEPKPESKKDWTL 80
+PR RG + EE++ + P++P P PEE K E++ + L
Sbjct: 303 QPRPRGDNSSVQKPEENIIDNN-PQEPSPNPEEGKGENRNGFDL 345
>M.Javanica_Scaff2117g020785 on AAW78164 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 29.6 bits (65), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 37 RPRGRGGEYRYKYSEEHVYEEEEPEKPKPKPEEPKPESKKDWTL 80
+PR RG + + EE++ + P++P P PEE K E+ + L
Sbjct: 303 QPRPRGDNFAVQKPEENIIDNN-PQEPSPNPEEGKGENPNGFDL 345
>M.Javanica_Scaff2117g020785 on AAW78158 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 29.6 bits (65), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 37 RPRGRGGEYRYKYSEEHVYEEEEPEKPKPKPEEPKPESKKDWTL 80
+PR RG + + EE++ + P++P P PEE K E+ + L
Sbjct: 303 QPRPRGDNFAVEKPEENIIDNN-PQEPSPNPEEGKGENPNGFDL 345
>M.Javanica_Scaff2117g020785 on XP_808611 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 848
Score = 30.0 bits (66), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 412 TLFEFFESIFAEARKQISSKNNSVINQICDEKLS-EKESEKCVDWLNNQSKILEKCN 467
+L E +FA A Q + NN V I E L+ E K +D N ++++L C+
Sbjct: 104 SLVEVNGGLFAVAEAQCTRNNNCVFTGIASELLTLTDEKPKELDTSNLKTQVLGNCS 160
>M.Javanica_Scaff2117g020785 on AAW78175 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 29.6 bits (65), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 37 RPRGRGGEYRYKYSEEHVYEEEEPEKPKPKPEEPKPESKKDWTL 80
+PR RG + EE++ + P++P P PEE K E++ + L
Sbjct: 303 QPRPRGDNSSVQKPEENIIDNN-PQEPSPNPEEGKGENRNGFDL 345
>M.Javanica_Scaff2117g020785 on AAW78174 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 29.6 bits (65), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 37 RPRGRGGEYRYKYSEEHVYEEEEPEKPKPKPEEPKPESKKDWTL 80
+PR RG + + EE++ + P++P P PEE K E+ + L
Sbjct: 303 QPRPRGDNFAVQKPEENIIDNN-PQEPSPNPEEGKDENPNGFDL 345
>M.Javanica_Scaff2117g020785 on AAW78173 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 29.3 bits (64), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 37 RPRGRGGEYRYKYSEEHVYEEEEPEKPKPKPEEPKPESKKDWTLGDLKVKFTVKKKTFVP 96
+PR RG + + E++ + P++P P PEE K E++ + L + + + P
Sbjct: 303 QPRPRGDNFAVEKPNENIIDNN-PQEPSPNPEEGKGENRNGFDLDENPENPSNPENPSNP 361
Query: 97 DV 98
D+
Sbjct: 362 DI 363
>M.Javanica_Scaff2117g020785 on AAQ11892 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 29.3 bits (64), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 37 RPRGRGGEYRYKYSEEHVYEEEEPEKPKPKPEEPKPESKKDWTL 80
+PR RG + + EE++ + P++P P PEE K E+ + L
Sbjct: 303 QPRPRGDNFAVEKPEENIIDNN-PQEPSPNPEEGKGENPNGFDL 345
>M.Javanica_Scaff2117g020785 on AAW78146 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 29.3 bits (64), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 38 PRGRGGEYRYKYSEEHVYEEEEPEKPKPKPEEPKPESKKDWTL 80
PR RG + + EE++ + P++P P PEE K E+ + L
Sbjct: 304 PRPRGDNFAVEKPEENIIDNN-PQEPSPNPEEGKDENPNGFDL 345
>M.Javanica_Scaff2117g020785 on AAQ11891 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 29.3 bits (64), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 37 RPRGRGGEYRYKYSEEHVYEEEEPEKPKPKPEEPKPESKKDWTL 80
+PR RG + + EE++ + P++P P PEE K E+ + L
Sbjct: 303 QPRPRGDNFAVEKPEENIIDNN-PQEPSPNPEEGKGENPNGFDL 345
>M.Javanica_Scaff2117g020785 on AAW78130 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 29.3 bits (64), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 38 PRGRGGEYRYKYSEEHVYEEEEPEKPKPKPEEPKPESKKDWTL 80
PR RG + + EE++ + P++P P PEE K E+ + L
Sbjct: 304 PRPRGDNFAVEKPEENIIDNN-PQEPSPNPEEGKDENPNGFDL 345
>M.Javanica_Scaff2117g020785 on AAQ11895 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 29.3 bits (64), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 37 RPRGRGGEYRYKYSEEHVYEEEEPEKPKPKPEEPKPESKKDWTL 80
+PR RG + + EE++ + P++P P PEE K E+ + L
Sbjct: 303 QPRPRGDNFAVEKPEENIIDNN-PQEPSPNPEEGKGENPNGFDL 345
>M.Javanica_Scaff2117g020785 on AAQ11894 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 28.9 bits (63), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 37 RPRGRGGEYRYKYSEEHVYEEEEPEKPKPKPEEPKPESKKDWTL 80
+PR RG + + EE++ + P++P P PEE K E+ + L
Sbjct: 303 QPRPRGDNFAVEKPEENIIDNN-PQEPSPNPEEGKGENPNGFDL 345
>M.Javanica_Scaff2117g020785 on AAW78137 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 28.9 bits (63), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 37 RPRGRGGEYRYKYSEEHVYEEEEPEKPKPKPEEPKPESKKDWTL 80
+PR RG + + +E++ + P++P P PEE K E++ + L
Sbjct: 303 QPRPRGDNFAVEEPKENIIDNN-PQEPSPNPEEGKGENRNGFDL 345
>M.Javanica_Scaff2117g020785 on AAW78139 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 28.9 bits (63), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 37 RPRGRGGEYRYKYSEEHVYEEEEPEKPKPKPEEPKPESKKDWTLGDLKVKFTVKKKTFVP 96
+PR RG + + E++ + P++P P PEE K E++ + L + + + P
Sbjct: 303 QPRPRGDNFAVEKPNENIIDNN-PQEPSPNPEEGKGENRNGFDLDENPENPSNPENPSNP 361
Query: 97 DV 98
D+
Sbjct: 362 DI 363
>M.Javanica_Scaff2117g020785 on AAA29770 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 28.9 bits (63), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 37 RPRGRGGEYRYKYSEEHVYEEEEPEKPKPKPEEPKPESKKDWTL 80
+PR RG + + EE++ + P++P P PEE K E+ + L
Sbjct: 303 QPRPRGDNFAVEKPEENIIDNN-PQEPSPNPEEGKGENPNGFDL 345
>M.Javanica_Scaff2117g020785 on AAW78172 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 28.9 bits (63), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 37 RPRGRGGEYRYKYSEEHVYEEEEPEKPKPKPEEPKPESKKDWTLGDLKVKFTVKKKTFVP 96
+PR RG + + +E++ + P++P P PEE K E++ + L + + + P
Sbjct: 303 QPRPRGDNFAVEEPKENIIDNN-PQEPSPNPEEGKGENRNGFDLDENPENPSNPENPSNP 361
Query: 97 DV 98
D+
Sbjct: 362 DI 363
>M.Javanica_Scaff2117g020785 on AAA29777 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 28.9 bits (63), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 37 RPRGRGGEYRYKYSEEHVYEEEEPEKPKPKPEEPKPESKKDWTL 80
+PR RG + + EE++ + P++P P PEE K E+ + L
Sbjct: 303 QPRPRGDNFAVEKPEENIIDNN-PQEPSPNPEEGKGENPNGFDL 345
>M.Javanica_Scaff2117g020785 on AAW78138 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 28.9 bits (63), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 37 RPRGRGGEYRYKYSEEHVYEEEEPEKPKPKPEEPKPESKKDWTL 80
+PR RG + EE++ + P++P P PEE K E+ + L
Sbjct: 303 QPRPRGDNSSVQKPEENIIDNN-PQEPSPNPEEGKGENPNGFDL 345
>M.Javanica_Scaff2117g020785 on AAW78136 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 28.9 bits (63), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 37 RPRGRGGEYRYKYSEEHVYEEEEPEKPKPKPEEPKPESKKDWTL 80
+PR RG + EE++ + P++P P PEE K E+ + L
Sbjct: 303 QPRPRGDNSSVQKPEENIIDNN-PQEPSPNPEEGKGENPNGFDL 345
>M.Javanica_Scaff2117g020785 on AAW78132 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 28.9 bits (63), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 38 PRGRGGEYRYKYSEEHVYEEEEPEKPKPKPEEPKPESKKDWTL 80
PR RG + ++ +E++ + P++P P PEE K E+ + L
Sbjct: 304 PRPRGDNFAFEKPKENIIDNN-PQEPSPNPEEGKGENPNGFDL 345
>M.Javanica_Scaff2117g020785 on AAW78176 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 28.9 bits (63), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 37 RPRGRGGEYRYKYSEEHVYEEEEPEKPKPKPEEPKPESKKDWTL 80
+PR RG + EE++ + P++P P PEE K E+ + L
Sbjct: 303 QPRPRGDNSSVQKPEENIIDNN-PQEPSPNPEEGKGENPNGFDL 345
>M.Javanica_Scaff2117g020785 on AAA29772 TRAP (Invasion) [Plasmodium falciparum]
Length = 565
Score = 28.9 bits (63), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 37 RPRGRGGEYRYKYSEEHVYEEEEPEKPKPKPEEPKPESKKDWTL 80
+PR RG + + E++ + P++P P PEE K E++ + L
Sbjct: 303 QPRPRGDNFAVEKPNENIIDNN-PQEPSPNPEEGKGENRNGFDL 345
>M.Javanica_Scaff2117g020785 on AAW78162 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 28.9 bits (63), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 37 RPRGRGGEYRYKYSEEHVYEEEEPEKPKPKPEEPKPESKKDWTL 80
+PR RG + EE++ + P++P P PEE K E+ + L
Sbjct: 303 QPRPRGDNSSVQKPEENIIDNN-PQEPSPNPEEGKGENPNGFDL 345
>M.Javanica_Scaff2117g020785 on AAL38220 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2957
Score = 28.9 bits (63), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 52 EHVYEEEEPEKPKPKPEEPKPESKK-DWTLGDLKVKFTVKKKTFVPDVVDFIKK 104
+HVY +E K EE K E K D T+ D+K++ T+K+ T + + + IKK
Sbjct: 745 QHVYTDE---KINDYLEEIKNEQNKIDKTIDDIKIQETLKQITHIVNNIKTIKK 795
>M.Javanica_Scaff2117g020785 on AAL38222 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2976
Score = 28.9 bits (63), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 52 EHVYEEEEPEKPKPKPEEPKPESKK-DWTLGDLKVKFTVKKKTFVPDVVDFIKK 104
+HVY +E K EE K E K D T+ D+K++ T+K+ T + + + IKK
Sbjct: 753 QHVYTDE---KINDYLEEIKNEQNKIDKTIDDIKIQETLKQITHIVNNIKTIKK 803
>M.Javanica_Scaff2117g020785 on AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2969
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 52 EHVYEEEEPEKPKPKPEEPKPESKK-DWTLGDLKVKFTVKKKTFVPDVVDFIKK 104
+HVY +E K EE K E K D T+ D+K++ T+K+ T + + + IKK
Sbjct: 753 QHVYTDE---KINDYLEEIKNEQNKIDKTIDDIKIQETLKQITHIVNNIKTIKK 803
>M.Javanica_Scaff2117g020785 on AAA29778 TRAP (Invasion) [Plasmodium falciparum]
Length = 562
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 37 RPRGRGGEYRYKYSEEHVYEEEEPEKPKPKPEEPKPESKKDWTL 80
+PR RG + + E++ + P++P P PEE K E++ + L
Sbjct: 303 QPRPRGDNFAVEKPNENIIDNN-PQEPSPNPEEGKGENRNGFDL 345
>M.Javanica_Scaff2117g020785 on AAL38218 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2977
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 52 EHVYEEEEPEKPKPKPEEPKPESKK-DWTLGDLKVKFTVKKKTFVPDVVDFIKK 104
+HVY +E K EE K E K D T+ D+K++ T+K+ T + + + IKK
Sbjct: 749 QHVYTDE---KINDYLEEIKNEQNKIDKTIDDIKIQETLKQITHIVNNIKTIKK 799
>M.Javanica_Scaff2117g020785 on AAW78177 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 37 RPRGRGGEYRYKYSEEHVYEEEEPEKPKPKPEEPKPESKKDWTL 80
+PR RG + EE++ + P++P P PEE K E+ + L
Sbjct: 303 QPRPRGDNSSVQKPEENIIDNN-PQEPSPNPEEGKGENPNGFDL 345
>M.Javanica_Scaff2117g020785 on AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2965
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 52 EHVYEEEEPEKPKPKPEEPKPESKK-DWTLGDLKVKFTVKKKTFVPDVVDFIKK 104
+HVY +E K EE K E K D T+ D+K++ T+K+ T + + + IKK
Sbjct: 751 QHVYTDE---KINDYLEEIKNEQNKIDKTIDDIKIQETLKQITHIVNNIKTIKK 801
>M.Javanica_Scaff2117g020785 on AAW78161 TRAP (Invasion) [Plasmodium falciparum]
Length = 554
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 37 RPRGRGGEYRYKYSEEHVYEEEEPEKPKPKPEEPKPESKKDWTL 80
+PR RG + EE++ + P++P P PEE K E+ + L
Sbjct: 303 QPRPRGDNSSVQKPEENIIDNN-PQEPSPNPEEGKGENPNGFDL 345
>M.Javanica_Scaff2117g020785 on AAW78150 TRAP (Invasion) [Plasmodium falciparum]
Length = 569
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 37 RPRGRGGEYRYKYSEEHVYEEEEPEKPKPKPEEPKPESKKDWTL 80
+PR RG + + +E++ + P++P P PEE K E++ + L
Sbjct: 303 QPRPRGDNFVVEKPKENIIDNN-PQEPSPNPEEGKGENRNGFDL 345
>M.Javanica_Scaff2117g020785 on AAW78147 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 38 PRGRGGEYRYKYSEEHVYEEEEPEKPKPKPEEPKPESKKDWTL 80
PR RG + ++ +E++ + P++P P PEE K E+ + L
Sbjct: 304 PRPRGDNFAFEKPKENIIDNN-PQEPSPNPEEGKDENPNGFDL 345
>M.Javanica_Scaff2117g020785 on AAW78141 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 37 RPRGRGGEYRYKYSEEHVYEEEEPEKPKPKPEEPKPESKKDWTL 80
+PR RG + + +E++ + P++P P PEE K E++ + L
Sbjct: 303 QPRPRGDNFVVEKPKENIIDNN-PQEPSPNPEEGKGENRNGFDL 345
>M.Javanica_Scaff2117g020785 on AAW78152 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 37 RPRGRGGEYRYKYSEEHVYEEEEPEKPKPKPEEPKPESKKDWTL 80
+PR RG + EE++ + P++P P PEE K E+ + L
Sbjct: 303 QPRPRGDNSSVQKPEENIIDNN-PQEPSPNPEEGKGENPNGFDL 345
>M.Javanica_Scaff2117g020785 on AAW78160 TRAP (Invasion) [Plasmodium falciparum]
Length = 557
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 37 RPRGRGGEYRYKYSEEHVYEEEEPEKPKPKPEEPKPESKKDWTL 80
+PR RG + + +E++ + P++P P PEE K E++ + L
Sbjct: 303 QPRPRGDNFAVEEPKENIIDNN-PQEPSPNPEEGKGENRNGFDL 345
>M.Javanica_Scaff2117g020785 on AAW78134 TRAP (Invasion) [Plasmodium falciparum]
Length = 551
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 37 RPRGRGGEYRYKYSEEHVYEEEEPEKPKPKPEEPKPESKKDWTL 80
+PR RG + + +E++ + P++P P PEE K E++ + L
Sbjct: 303 QPRPRGDNFAVEEPKENIIDNN-PQEPSPNPEEGKGENRNGFDL 345
>M.Javanica_Scaff2117g020785 on AAW78171 TRAP (Invasion) [Plasmodium falciparum]
Length = 551
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 37 RPRGRGGEYRYKYSEEHVYEEEEPEKPKPKPEEPKPESKKDWTL 80
+PR RG + + +E++ + P++P P PEE K E++ + L
Sbjct: 303 QPRPRGDNFAVEEPKENIIDNN-PQEPSPNPEEGKGENRNGFDL 345
>M.Javanica_Scaff2117g020785 on AAW78148 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 37 RPRGRGGEYRYKYSEEHVYEEEEPEKPKPKPEEPKPESKKDWTL 80
+PR RG + EE++ + P++P P PEE K E+ + L
Sbjct: 303 QPRPRGDNSAVQEPEENIIDNN-PQEPSPNPEEGKGENPNGFDL 345
>M.Javanica_Scaff2117g020785 on AAW78131 TRAP (Invasion) [Plasmodium falciparum]
Length = 557
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 37 RPRGRGGEYRYKYSEEHVYEEEEPEKPKPKPEEPKPESKKDWTL 80
+PR RG + + +E++ + P++P P PEE K E++ + L
Sbjct: 303 QPRPRGDNFDVEKPKENIIDNN-PQEPSPNPEEGKGENRNGFDL 345
>M.Javanica_Scaff2117g020785 on AAW78165 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 37 RPRGRGGEYRYKYSEEHVYEEEEPEKPKPKPEEPKPESKKDWTL 80
+PR RG + + +E++ + P++P P PEE K E+ + L
Sbjct: 303 QPRPRGDNFAVQKPKENIIDNN-PQEPSPNPEEGKDENPNGFDL 345
>M.Javanica_Scaff2117g020785 on AAW78151 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 37 RPRGRGGEYRYKYSEEHVYEEEEPEKPKPKPEEPKPESKKDWTL 80
+PR RG + + E++ + P++P P PEE K E+ + L
Sbjct: 303 QPRPRGDNFAVEEPNENIIDNN-PQEPSPNPEEGKGENPNGFDL 345
>M.Javanica_Scaff2117g020785 on AAW78167 TRAP (Invasion) [Plasmodium falciparum]
Length = 575
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 37 RPRGRGGEYRYKYSEEHVYEEEEPEKPKPKPEEPKPESKKDWTL 80
+PR RG + + E++ + P++P P PEE K E++ + L
Sbjct: 303 QPRPRGDNFAVEKPNENIIDNN-PQEPSPNPEEGKGENRNGFDL 345
>M.Javanica_Scaff2117g020785 on AAW78144 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 37 RPRGRGGEYRYKYSEEHVYEEEEPEKPKPKPEEPKPESKKDWTL 80
+PR RG + + E++ + P++P P PEE K E+ + L
Sbjct: 303 QPRPRGDNFAVEKPNENIIDNN-PQEPSPNPEEGKGENPNGFDL 345
>M.Javanica_Scaff2117g020785 on AAW78149 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 37 RPRGRGGEYRYKYSEEHVYEEEEPEKPKPKPEEPKPESKKDWTL 80
+PR RG + + E++ + P++P P PEE K E+ + L
Sbjct: 303 QPRPRGDNFAVEKPNENIIDNN-PQEPSPNPEEGKGENPNGFDL 345
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff24835g089962
(60 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff17206g076220
(97 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_821088 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.9
XP_802286 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.9
XP_815315 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.5
XP_001349738 PfEMP1 (Establishment) [Plasmodium falciparum] 22 7.8
>M.Javanica_Scaff17206g076220 on XP_821088 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 910
Score = 23.5 bits (49), Expect = 2.9, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 59 NDDESPILRLIRSFKQKQQKKKKQKEEKERQCWIRIN 95
ND++ +L + + +K +K K E+ E + W+ N
Sbjct: 381 NDNKKVMLITLPVYAKKAEKDNKNNEKGELRLWLTDN 417
>M.Javanica_Scaff17206g076220 on XP_802286 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 461
Score = 23.1 bits (48), Expect = 3.9, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 58 ENDDESPILRLIRSFKQKQQKKKKQKEEKERQCWIRIN 95
END + +L + F +K + KE+ E W+ N
Sbjct: 136 ENDKRNVMLVTLPVFSKKADTGGRGKEKGELHLWLTDN 173
>M.Javanica_Scaff17206g076220 on XP_815315 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 799
Score = 23.1 bits (48), Expect = 4.5, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 25/53 (47%)
Query: 1 MSSLLFKLFIIFLILLIINNCNSSRIKIQRNLNKYTSTTTTPKPVNTLKEENE 53
MS +F ++FL+++++ C S + L ++ +P KEE E
Sbjct: 39 MSRRVFTSAVLFLLVVVMMYCGSGVVAEADGLAPGQESSPSPSFAWRDKEEGE 91
>M.Javanica_Scaff17206g076220 on XP_001349738 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2162
Score = 22.3 bits (46), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 13/55 (23%), Positives = 24/55 (43%)
Query: 10 IIFLILLIINNCNSSRIKIQRNLNKYTSTTTTPKPVNTLKEENELLLDENDDESP 64
+ L +N + + ++ ++ TT KP N E +++ LDEN P
Sbjct: 1109 AMVCALTYKDNGDKGKPQVDDTVHSQLWDTTKNKPKNRQYEYDQVKLDENSGTGP 1163
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2232g021558
(285 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff16322g074330
(143 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAY44839 MSA-1 (Invasion) [Babesia bovis] 25 1.5
XP_001352170 MSP1 (Invasion) [Plasmodium falciparum] 24 4.4
XP_809181 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 7.4
XP_808402 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 8.1
>M.Javanica_Scaff16322g074330 on AAY44839 MSA-1 (Invasion) [Babesia bovis]
Length = 274
Score = 25.4 bits (54), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 8/27 (29%)
Query: 68 NGNFEMQGGVGQITKMDVHFKIYHDCN 94
NGNFE T MD +IYH CN
Sbjct: 118 NGNFE--------TLMDSVIQIYHKCN 136
>M.Javanica_Scaff16322g074330 on XP_001352170 MSP1 (Invasion) [Plasmodium falciparum]
Length = 1720
Score = 24.3 bits (51), Expect = 4.4, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 10/67 (14%)
Query: 85 VHFKIYHDCNDGIKPCQRKIDLGVPDEYITRSDRVQKWFEAGTMNMEFKF-------PDE 137
V I H ND + + + L DE++T+S K+ +M+ K P+E
Sbjct: 779 VENSIEHKSNDNSQALTKTVYLKKLDEFLTKSYICHKYILVSNSSMDQKLLEVYNLTPEE 838
Query: 138 E---RSC 141
E +SC
Sbjct: 839 ENELKSC 845
>M.Javanica_Scaff16322g074330 on XP_809181 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 665
Score = 23.5 bits (49), Expect = 7.4, Method: Composition-based stats.
Identities = 10/49 (20%), Positives = 25/49 (51%)
Query: 40 QPLKDTQVKLWNKHIGSDNQLAAVKTDKNGNFEMQGGVGQITKMDVHFK 88
+P +DT + L H+ ++L + D +++ G+I K+ + ++
Sbjct: 414 EPKEDTPIPLMGVHLEGKDKLMELSYDSEKKWQVLCSDGKIKKLKITWE 462
>M.Javanica_Scaff16322g074330 on XP_808402 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 846
Score = 23.1 bits (48), Expect = 8.1, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 39 NQPLKDTQVKLWNKHIGSDNQLAAVKTDKNGNFEMQG 75
N+PL DT++ N + S +L +KT+ F + G
Sbjct: 718 NRPLDDTELTALNTNKFSIPKLEDLKTEVRDAFPLAG 754
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff17042g075862
(67 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAY44829 MSA-1 (Invasion) [Babesia bovis] 23 1.4
AAY44834 MSA-1 (Invasion) [Babesia bovis] 23 1.4
AAY44830 MSA-1 (Invasion) [Babesia bovis] 23 1.4
XP_001610908 RAP-1 (Adhesin) [Babesia bovis] 23 2.1
XP_001350935 PfEMP1 (Establishment) [Plasmodium falciparum] 22 3.4
ABR92027 MSA-1 (Invasion) [Babesia bovis] 22 3.5
ABR92029 MSA-1 (Invasion) [Babesia bovis] 22 3.5
ABR92031 MSA-1 (Invasion) [Babesia bovis] 22 3.5
>M.Javanica_Scaff17042g075862 on AAY44829 MSA-1 (Invasion) [Babesia bovis]
Length = 318
Score = 23.1 bits (48), Expect = 1.4, Method: Composition-based stats.
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 22 MYKSICRNYRNWGLSNSK 39
MY I N+RN GL++ K
Sbjct: 62 MYGVIAANFRNGGLADEK 79
>M.Javanica_Scaff17042g075862 on AAY44834 MSA-1 (Invasion) [Babesia bovis]
Length = 320
Score = 23.1 bits (48), Expect = 1.4, Method: Composition-based stats.
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 22 MYKSICRNYRNWGLSNSK 39
MY I N+RN GL++ K
Sbjct: 62 MYGVIAANFRNGGLADEK 79
>M.Javanica_Scaff17042g075862 on AAY44830 MSA-1 (Invasion) [Babesia bovis]
Length = 322
Score = 23.1 bits (48), Expect = 1.4, Method: Composition-based stats.
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 22 MYKSICRNYRNWGLSNSK 39
MY I N+RN GL++ K
Sbjct: 62 MYGVIAANFRNGGLADEK 79
>M.Javanica_Scaff17042g075862 on XP_001610908 RAP-1 (Adhesin) [Babesia bovis]
Length = 565
Score = 22.7 bits (47), Expect = 2.1, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 23 YKSICRNYRNWGLSNSKRPSRKFISSQIKIFKFWNVLK 60
YK + +R++ N +P++KFI ++ K N LK
Sbjct: 299 YKRWIKKFRDFFSKNVTQPTKKFIEDTNEVTK--NYLK 334
>M.Javanica_Scaff17042g075862 on XP_001350935 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2268
Score = 22.3 bits (46), Expect = 3.4, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 11 FRHFQSHQIWSMYKSICRNYRNWGLSNSKRPSRKFISSQI 50
F+H + + S +K C+N ++ G + +K P K + I
Sbjct: 1414 FKHADNCKPCSSFKIYCKNCKSSGGTENKCPKGKISADDI 1453
>M.Javanica_Scaff17042g075862 on ABR92027 MSA-1 (Invasion) [Babesia bovis]
Length = 330
Score = 22.3 bits (46), Expect = 3.5, Method: Composition-based stats.
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 22 MYKSICRNYRNWGLSNSK 39
+Y I N+RN GL++ K
Sbjct: 62 LYAVIAANFRNGGLADEK 79
>M.Javanica_Scaff17042g075862 on ABR92029 MSA-1 (Invasion) [Babesia bovis]
Length = 330
Score = 22.3 bits (46), Expect = 3.5, Method: Composition-based stats.
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 22 MYKSICRNYRNWGLSNSK 39
+Y I N+RN GL++ K
Sbjct: 62 LYAVIAANFRNGGLADEK 79
>M.Javanica_Scaff17042g075862 on ABR92031 MSA-1 (Invasion) [Babesia bovis]
Length = 330
Score = 22.3 bits (46), Expect = 3.5, Method: Composition-based stats.
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 22 MYKSICRNYRNWGLSNSK 39
+Y I N+RN GL++ K
Sbjct: 62 LYAVIAANFRNGGLADEK 79
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1933g019428
(73 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff24493g089434
(84 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum] 24 1.6
>M.Javanica_Scaff24493g089434 on XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2980
Score = 23.9 bits (50), Expect = 1.6, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 44 ILTQVETIVQVLYNQSLHKVF-DNVSYNREISSLIFPNNF 82
I TQ T + + + HK DNV+ RE++S I P+ F
Sbjct: 1273 IRTQFITCAAIETHFAWHKYKKDNVNAERELNSGIIPHEF 1312
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff18015g077884
(123 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351438 PfEMP1 (Establishment) [Plasmodium falciparum] 29 0.085
XP_001351439 PfEMP1 (Establishment) [Plasmodium falciparum] 29 0.085
XP_001611441 variant erythrocyte surface antigen-1, beta subuni... 23 7.7
>M.Javanica_Scaff18015g077884 on XP_001351438 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2312
Score = 28.9 bits (63), Expect = 0.085, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 7/45 (15%)
Query: 82 GVGLGTEDFLPPTS----AILPNPLPFFDVFVALVVFPGVGLSGD 122
GVG G DFLP TS A+ P +P +L + GVG+ G+
Sbjct: 998 GVGAGGADFLPATSSVATALAPGAVPSRP---SLQLLSGVGVPGE 1039
>M.Javanica_Scaff18015g077884 on XP_001351439 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2326
Score = 28.9 bits (63), Expect = 0.085, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 7/45 (15%)
Query: 82 GVGLGTEDFLPPTS----AILPNPLPFFDVFVALVVFPGVGLSGD 122
GVG G DFLP TS A+ P +P +L + GVG+ G+
Sbjct: 1012 GVGAGGADFLPATSSVATALAPGAVPSRP---SLQLLSGVGVPGE 1053
>M.Javanica_Scaff18015g077884 on XP_001611441 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1205
Score = 23.1 bits (48), Expect = 7.7, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 57 EVGVDGDIGINDITSEPATGGG 78
E + GD GI + P TGGG
Sbjct: 141 ECCLKGDKGIGKVCECPGTGGG 162
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff22752g086683
(78 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff21249g084131
(81 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_803397 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.0
XP_654336 Lgl3 (Adhesin) [Entamoeba histolytica] 23 3.2
XP_845141 VSG (Establishment) [Trypanosoma brucei] 22 4.3
AAL15421 MSA-2a1 (Invasion) [Babesia bovis] 22 5.3
ABA06450 MSA-2a1 (Invasion) [Babesia bovis] 22 5.4
AAL15422 MSA-2a2 (Invasion) [Babesia bovis] 22 6.0
ABA06473 MSA-2b (Invasion) [Babesia bovis] 22 6.3
XP_001349207 EBA-175 (Adhesin) [Plasmodium falciparum] 22 7.4
>M.Javanica_Scaff21249g084131 on XP_803397 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 376
Score = 23.1 bits (48), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 9/13 (69%), Positives = 10/13 (76%)
Query: 58 EDNIQLIEGLTKP 70
EDN+QL EG T P
Sbjct: 125 EDNVQLSEGETSP 137
>M.Javanica_Scaff21249g084131 on XP_654336 Lgl3 (Adhesin) [Entamoeba histolytica]
Length = 294
Score = 22.7 bits (47), Expect = 3.2, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 31 LIDEGDNNSNSNKQMTDDDVSNKT 54
+I D N + KQ TD+D N+T
Sbjct: 81 VIFASDYNYKTEKQFTDEDDKNET 104
>M.Javanica_Scaff21249g084131 on XP_845141 VSG (Establishment) [Trypanosoma brucei]
Length = 486
Score = 22.3 bits (46), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 4 EVPVVSTTSSANLMDSKIEAENSDA 28
+VPV++ T +NL D+ AE + A
Sbjct: 44 KVPVMAYTHESNLQDAITAAERTAA 68
>M.Javanica_Scaff21249g084131 on AAL15421 MSA-2a1 (Invasion) [Babesia bovis]
Length = 316
Score = 22.3 bits (46), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 48 DDVSNKTEASEDNIQLIEGLTKPSSA 73
D + T+ E N+Q +G TKP+ +
Sbjct: 271 DHPTKPTQTPEGNLQGQQGTTKPAGS 296
>M.Javanica_Scaff21249g084131 on ABA06450 MSA-2a1 (Invasion) [Babesia bovis]
Length = 316
Score = 22.3 bits (46), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 48 DDVSNKTEASEDNIQLIEGLTKPSSA 73
D + T+ E N+Q +G TKP+ +
Sbjct: 271 DHPTKPTQTPEGNLQGQQGTTKPAGS 296
>M.Javanica_Scaff21249g084131 on AAL15422 MSA-2a2 (Invasion) [Babesia bovis]
Length = 292
Score = 21.9 bits (45), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 48 DDVSNKTEASEDNIQLIEGLTKPSSA 73
D + T+ E N+Q +G TKP+ +
Sbjct: 247 DHPTKPTQTPEGNLQGQQGTTKPAGS 272
>M.Javanica_Scaff21249g084131 on ABA06473 MSA-2b (Invasion) [Babesia bovis]
Length = 316
Score = 21.9 bits (45), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 48 DDVSNKTEASEDNIQLIEGLTKPSSA 73
D + T+ E N+Q +G TKP+ +
Sbjct: 271 DHPTKPTQTPEGNLQGQQGTTKPAGS 296
>M.Javanica_Scaff21249g084131 on XP_001349207 EBA-175 (Adhesin) [Plasmodium falciparum]
Length = 1462
Score = 21.9 bits (45), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 5 VPVVSTTSSANLMDSKIEAENSDANNLIDEGDNNSNS 41
+ ++ T + + D IEA ++ L+ + DN NS
Sbjct: 193 LSIIKTYTKETMKDHFIEASKKESQLLLKKNDNKYNS 229
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1780g018313
(283 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_804902 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.9
XP_001610496 variant erythrocyte surface antigen-1, beta subuni... 26 3.0
XP_810068 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 8.0
XP_001609618 variant erythrocyte surface antigen-1, alpha subun... 24 9.5
>M.Javanica_Scaff1780g018313 on XP_804902 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1042
Score = 26.2 bits (56), Expect = 2.9, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 34/89 (38%)
Query: 21 NSGDSGNENSNSKPNDEFADSVDVRADDNEQQPSNSIDKQNLQDPQFIKEDDTNGLQMEY 80
++G+S E++ D+ + D Q + + Q+ Q + D G Y
Sbjct: 785 SAGNSHQEDNAQLSEDKTSQQTTPHEDYKSMQRDSDVQPQDPQSEVLTEVADVEGSSESY 844
Query: 81 TTEKIKDEEDQLNNEGSGVDNVFPEEDND 109
T+ ++EE+ + G V D D
Sbjct: 845 DTQLPEEEEEADDRSGESTSPVGASSDMD 873
>M.Javanica_Scaff1780g018313 on XP_001610496 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1159
Score = 26.2 bits (56), Expect = 3.0, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 162 VDKIFKIFPEEDNDNGVIDDNGEERTPTSEEQQQIEEYL 200
VD++ FPE++ G + +GE T+ ++ I YL
Sbjct: 425 VDRMGGKFPEDEQKKGELKLHGESNASTTLKRDCITHYL 463
>M.Javanica_Scaff1780g018313 on XP_810068 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1147
Score = 24.6 bits (52), Expect = 8.0, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Query: 21 NSGDSGNENSNSKPNDEFADSVDVRADDNEQQPSNSIDKQNLQDPQFIKEDDTNGLQMEY 80
++G+S EN+ E + D+ Q + + Q L + + D G Y
Sbjct: 890 SAGNSLPENNVQLFEGETSQQATPHEDNESMQRDSKVQTQELPSEEPAEFTDFEGSSESY 949
Query: 81 TTEKIKDEEDQLNNEGSG 98
TE+ +EE+ N GSG
Sbjct: 950 DTEQPVEEEEA--NGGSG 965
>M.Javanica_Scaff1780g018313 on XP_001609618 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1325
Score = 24.3 bits (51), Expect = 9.5, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Query: 69 KEDDTNGLQMEYTTEKIKDEEDQLNNEGSGVDNVFPEEDNDVNELDINTTAKYANDIDDN 128
+E + +GL + EK+K D+L + G + E D + + T K ++D
Sbjct: 729 QELEKDGLDVLDGEEKLKGALDKLTTKNGGSSGILKEVDGALEK----ATNKDGKEVDPG 784
Query: 129 DNNESDGQSCVYE 141
N S+ + V E
Sbjct: 785 KNKISEAINKVLE 797
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff18516g078945
(323 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001610497 variant erythrocyte surface antigen-1, alpha subun... 25 8.5
>M.Javanica_Scaff18516g078945 on XP_001610497 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1315
Score = 24.6 bits (52), Expect = 8.5, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Query: 209 KKEIENGAKSIVDRIGVGLTFIRKNKDLMGFNEKDSKLVADIEKAKLKLRSELYNAENFK 268
KKE G K+++ + L + ++L N KD + I KAK L +
Sbjct: 691 KKEAIEGVKTVLGKAKGELD--KAKQELEQVNGKDGQTSQAISKAKKALEALTNGGSGAL 748
Query: 269 NENLAEEIIQNDDAEGFKKKYTERFKKITRVAK 301
+ +++ + + + E +KK Y+ KI+ K
Sbjct: 749 HTLVSDGLEKAANGEEWKKDYSSAKDKISAAIK 781
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff22718g086613
(364 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349437 PfEMP1 (Establishment) [Plasmodium falciparum] 32 0.057
XP_814925 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.52
XP_820145 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.60
XP_811004 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.76
XP_818312 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 1.1
XP_809580 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.7
XP_807772 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.1
XP_817537 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 3.7
XP_809997 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.6
XP_001349438 PfEMP1 (Establishment) [Plasmodium falciparum] 25 8.6
>M.Javanica_Scaff22718g086613 on XP_001349437 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2231
Score = 32.0 bits (71), Expect = 0.057, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 27/112 (24%)
Query: 177 GDKGKRHPHVLFRVFGNGTECGGGGESSNDIEGQQQEKFIKRRRKRTKKSRGKRKSEG-- 234
GD+G+RHP GNG+ G GE N ++ +++ ++ K + S G KSEG
Sbjct: 72 GDRGERHP------CGNGS---GKGEDVNRFSKERVDEYDNKKMKCSYGSNG--KSEGAC 120
Query: 235 ---------EENLRRLRQQ-----RLFLDIALLVNKEMQYLFNIGQQKLLEY 272
++N+++++ + L LD+ L E + L +Q ++Y
Sbjct: 121 APFRRLHVCDKNIQQIKTENITTHNLLLDVCLAAKYEGESLKGYHEQYEVQY 172
>M.Javanica_Scaff22718g086613 on XP_814925 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 110
Score = 27.3 bits (59), Expect = 0.52, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 22/47 (46%)
Query: 220 RKRTKKSRGKRKSEGEENLRRLRQQRLFLDIALLVNKEMQYLFNIGQ 266
R+R S G+R+ GE +RL R A+L+ + F G+
Sbjct: 16 RRRVTGSSGRRREGGESEPQRLNMSRRVFTSAVLLLLVVMMCFGTGE 62
>M.Javanica_Scaff22718g086613 on XP_820145 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 871
Score = 28.9 bits (63), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 62/157 (39%), Gaps = 20/157 (12%)
Query: 220 RKRTKKSRGKRKSEGEENLRRLRQQRLFLDIALLVNKEMQYLFNIGQQKLLE-------Y 272
R+R S G+R+ GE +R R A+L+ M + Q ++E +
Sbjct: 16 RRRVTGSSGRRREGGESEPQRPNMSRHLFYSAVLLLVVMVCCGSGAAQVVVEEPSSGPQF 75
Query: 273 SLNALN-----IADLIFKKGLNIRISLNYFALIENLNKNN-------SNQLLDNLLDFTI 320
+N D + L +++ + FA+ E KN ++QLL T
Sbjct: 76 EWRGINENEGETVDSLGAPSL-LKVGSDVFAVAEAQCKNGGVGFTGVASQLLTKETADTP 134
Query: 321 NKLYKEEKDVTIYLTNLNKQKQQNNIALNVDNSVCSG 357
++ KE KD T L + Q+ + ++ +V G
Sbjct: 135 EEVLKESKDGTQVLEKGASEDQKKKVDVSRPTTVLKG 171
>M.Javanica_Scaff22718g086613 on XP_811004 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 933
Score = 28.5 bits (62), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 64/148 (43%), Gaps = 22/148 (14%)
Query: 219 RRKRTKKSRGKRKSEGEENLRRLRQQRLFLDIALLVNKEMQYLFNIGQQKLLEYSLN--- 275
RR+ T S +R+ + E R +R+F LL+ M + G + +E S +
Sbjct: 16 RRRVTGSSERRREGKKSEPRRPNMSRRVFTSAVLLL--VMIFCGTCGATQAVEPSSDPKL 73
Query: 276 ---ALNIADLIFK----KGLNIRISLNYFALIENLNKNN---------SNQLLDNLLDFT 319
+++ D+ K GL +++ + FA+ E K N ++QLL D
Sbjct: 74 QWKGISVGDVTVKSLSAPGL-LKVGNDVFAVAEAQCKKNDGEDTFTGVASQLLTETADNE 132
Query: 320 INKLYKEEKDVTIYLTNLNKQKQQNNIA 347
++ + KD + ++ +K + +++
Sbjct: 133 PEEVLNDVKDTLVLEEGISSEKTRVDVS 160
>M.Javanica_Scaff22718g086613 on XP_818312 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 928
Score = 27.7 bits (60), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 220 RKRTKKSRGKRKSEGEENLRRLR-QQRLFLDIALLV 254
R+R S G+R+ GE RR +RLF LLV
Sbjct: 16 RRRVTGSSGRRREGGESEPRRPNMSRRLFTSAVLLV 51
>M.Javanica_Scaff22718g086613 on XP_809580 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 776
Score = 27.3 bits (59), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 12/66 (18%)
Query: 175 EGGDKGKRHPHVLFRVFGNGT--------ECGGGGESSNDI----EGQQQEKFIKRRRKR 222
EGG+ + P++ RVF + CGGG SS D+ +G EK+ K+
Sbjct: 28 EGGESEPQRPNMSRRVFTSAVLLLLVVMMCCGGGAASSQDMPSSSQGASSEKYYVWTEKK 87
Query: 223 TKKSRG 228
++ G
Sbjct: 88 GGETVG 93
>M.Javanica_Scaff22718g086613 on XP_807772 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 852
Score = 26.9 bits (58), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 18/82 (21%)
Query: 118 IQSEKDMEVIRLS---DVENCFYQGTVIGEPGSMVTLSTCDGLWGLLAFANGSALGIWPL 174
I + KD +LS + C Y V E G ++ ++ CDG G
Sbjct: 278 IYTSKDTLTWKLSKGMSADGCSYPSVVEWEEGKLMMMTACDG--GRRRV----------Y 325
Query: 175 EGGDKGKRHPHV---LFRVFGN 193
E GDKG L RV+GN
Sbjct: 326 ESGDKGASWTEALGTLSRVWGN 347
>M.Javanica_Scaff22718g086613 on XP_817537 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 762
Score = 26.2 bits (56), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 220 RKRTKKSRGKRKSEGEENLRRLRQQRLFLDIALLV 254
R+R SRG+R GE +R R + A+L+
Sbjct: 16 RRRVTGSRGRRNEGGESEPQRPNMSRCVFNFAVLL 50
>M.Javanica_Scaff22718g086613 on XP_809997 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 437
Score = 25.4 bits (54), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 173 PLEGGDKGKRHPHVLFRVFGN 193
P G +G+RH L RV+GN
Sbjct: 3 PATRGIRGRRHSWTLSRVWGN 23
>M.Javanica_Scaff22718g086613 on XP_001349438 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2265
Score = 25.0 bits (53), Expect = 8.6, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 303 LNKNNSNQLLDNLLDFTINKLYKEEKDVTIYLTNL----NKQKQQ 343
L++ + + DN TI+KL K EKD + NKQKQQ
Sbjct: 771 LDEEEAAGVTDNENKTTIDKLLKHEKDEADKCKQIQEECNKQKQQ 815
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff21757g085010
(111 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351080 PfEMP1 (Establishment) [Plasmodium falciparum] 23 3.7
XP_827749 VSG (Establishment) [Trypanosoma brucei] 23 5.2
XP_001351079 PfEMP1 (Establishment) [Plasmodium falciparum] 23 8.4
XP_829762 VSG (Establishment) [Trypanosoma brucei] 22 9.6
>M.Javanica_Scaff21757g085010 on XP_001351080 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2209
Score = 23.5 bits (49), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 86 FKVYKSHKTNDWPKVQTNWPKQDFMK 111
F+ + KT +W +V+ ++ K+DF K
Sbjct: 628 FQKWGVRKTKEWQQVKAHYEKEDFGK 653
>M.Javanica_Scaff21757g085010 on XP_827749 VSG (Establishment) [Trypanosoma brucei]
Length = 516
Score = 23.1 bits (48), Expect = 5.2, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Query: 38 DSNVKEGVFKSPGFPLKYCGSLDCKW 63
D +KE K G + C S+DCKW
Sbjct: 453 DDGIKEE--KCAGKQQEDCKSMDCKW 476
>M.Javanica_Scaff21757g085010 on XP_001351079 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2203
Score = 22.7 bits (47), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 24 DSNNDCSCPKEQIFD 38
D N DC+ KE+IFD
Sbjct: 511 DKNKDCAKKKERIFD 525
>M.Javanica_Scaff21757g085010 on XP_829762 VSG (Establishment) [Trypanosoma brucei]
Length = 503
Score = 22.3 bits (46), Expect = 9.6, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 10/19 (52%)
Query: 47 KSPGFPLKYCGSLDCKWNI 65
K G K C S DCKW I
Sbjct: 459 KCKGKGEKDCKSPDCKWEI 477
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2129g020870
(85 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001348153 MAEBL (Adhesin) [Plasmodium falciparum] 25 0.75
>M.Javanica_Scaff2129g020870 on XP_001348153 MAEBL (Adhesin) [Plasmodium falciparum]
Length = 2054
Score = 24.6 bits (52), Expect = 0.75, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 49 YARTRTSYQIRVRILVRAS--KHCMGPFLTKKFQN 81
Y + Y +++ L S HC+GP L K F N
Sbjct: 217 YVTKKMRYPEKIKNLFDCSIYSHCIGPCLYKDFNN 251
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff218g003565
(206 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_814930 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.0
XP_804173 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 6.0
XP_814623 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 7.9
XP_821293 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 8.2
>M.Javanica_Scaff218g003565 on XP_814930 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 938
Score = 25.8 bits (55), Expect = 2.0, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 58 DDNYEGEGECEAEDDGGEGEIQEENPDTEGQWEEEYEGEIQEEGEWEGDYECEAQVEHQY 117
D +G G+ E + + G+ E ++E+ D+E + + +E G+ E D + E +
Sbjct: 763 DKKEKGSGDSEDKKESGDSEDKKESGDSEDKKGSGDSEDKKESGDSE-DKKESGDSEDKK 821
Query: 118 TEREGDIVPSSSHGETSYHYGAWDEDIHQN 147
+G P+ S+ T + A +E ++Q+
Sbjct: 822 GSGDGAFTPAVSNATT---HTAEEETVNQS 848
>M.Javanica_Scaff218g003565 on XP_804173 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 746
Score = 24.3 bits (51), Expect = 6.0, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 86 EGQWEEEYEGEIQEEGEWE 104
+ +WE ++G+I + G WE
Sbjct: 594 DNKWETMFKGKITKSGTWE 612
>M.Javanica_Scaff218g003565 on XP_814623 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 895
Score = 23.9 bits (50), Expect = 7.9, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 13/44 (29%)
Query: 50 GNQNANQTDDNYEGEGECEAED-------------DGGEGEIQE 80
GNQ++ D G ECE E+ DGG E QE
Sbjct: 673 GNQSSAYVDGKLVGSAECECENTKDKEISHFYIGGDGGSAEGQE 716
>M.Javanica_Scaff218g003565 on XP_821293 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 786
Score = 23.9 bits (50), Expect = 8.2, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 65 GECEAEDDGGEGEIQEENPDTEGQWEEEYEGE 96
G EA G QE +P W ++ EGE
Sbjct: 59 GSGEAAQAAGPSSGQESSPSPSFAWRDKKEGE 90
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff19518g080949
(126 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ABR92030 MSA-1 (Invasion) [Babesia bovis] 23 9.1
>M.Javanica_Scaff19518g080949 on ABR92030 MSA-1 (Invasion) [Babesia bovis]
Length = 328
Score = 22.7 bits (47), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 76 EPGASTTGGTQRDRPATSCLGQNEAEKP 103
+P AS G + +RPA + GQ ++ KP
Sbjct: 280 DPAAS--GSSPVERPAGNLTGQQDSSKP 305
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff22329g085974
(357 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_828093 VSG (Establishment) [Trypanosoma brucei] 25 7.6
XP_815706 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 9.0
XP_815707 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 9.0
>M.Javanica_Scaff22329g085974 on XP_828093 VSG (Establishment) [Trypanosoma brucei]
Length = 512
Score = 25.0 bits (53), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 9/31 (29%), Positives = 19/31 (61%)
Query: 111 KPLNPSTKQQYWNSNNSSCIHLYDETSCNKR 141
K L+ +TK++ + +C + DET+C+ +
Sbjct: 388 KKLDEATKKKDTKAAEDTCNKIKDETACSNK 418
>M.Javanica_Scaff22329g085974 on XP_815706 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 907
Score = 25.0 bits (53), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 12 GNLYGGGEGCQ-----PISAPPVPNSPFRN 36
G+ YGG Q P++ PPVP FRN
Sbjct: 73 GDYYGGHSSEQSQREYPVANPPVPGHIFRN 102
>M.Javanica_Scaff22329g085974 on XP_815707 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 907
Score = 25.0 bits (53), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 12 GNLYGGGEGCQ-----PISAPPVPNSPFRN 36
G+ YGG Q P++ PPVP FRN
Sbjct: 73 GDYYGGHSSEQSQREYPVANPPVPGHIFRN 102
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff22606g086443
(69 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_806427 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.3
XP_845136 VSG (Establishment) [Trypanosoma brucei] 23 2.4
XP_001350798 PfEMP1 (Establishment) [Plasmodium falciparum] 22 3.7
>M.Javanica_Scaff22606g086443 on XP_806427 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 886
Score = 23.5 bits (49), Expect = 1.3, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 31 NNNLKQLESIYDKNAETFTIVKWK 54
NNN K L+ I D ++V+W+
Sbjct: 282 NNNWKLLKEISDDGCSDPSVVEWR 305
>M.Javanica_Scaff22606g086443 on XP_845136 VSG (Establishment) [Trypanosoma brucei]
Length = 481
Score = 22.7 bits (47), Expect = 2.4, Method: Composition-based stats.
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 36 QLESIYDKNAETFTIVKWKYAESILKP 62
Q+++++ K+ FT WK E P
Sbjct: 317 QIDTVFGKDPANFTNNNWKLVEEYTLP 343
>M.Javanica_Scaff22606g086443 on XP_001350798 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2359
Score = 22.3 bits (46), Expect = 3.7, Method: Composition-based stats.
Identities = 7/21 (33%), Positives = 15/21 (71%)
Query: 38 ESIYDKNAETFTIVKWKYAES 58
++++D+N T +K+KY E+
Sbjct: 1342 DALWDENGATNEPIKYKYTEA 1362
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff19054g080035
(76 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ABA06443 MSA-2a/b (Invasion) [Babesia bovis] 23 2.8
ABA06447 MSA-2a/b (Invasion) [Babesia bovis] 23 2.9
AAF14193 SBP3 (Others) [Babesia bovis] 23 3.6
>M.Javanica_Scaff19054g080035 on ABA06443 MSA-2a/b (Invasion) [Babesia bovis]
Length = 270
Score = 22.7 bits (47), Expect = 2.8, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 18 SSRFTKTKKPKHETTTPAINATEEIENDPAPAHCPK 53
SS+ T T +P ++ P +A PA PK
Sbjct: 211 SSQGTTTTRPSQDSAAPNTSAGNLNGQPSKPAETPK 246
>M.Javanica_Scaff19054g080035 on ABA06447 MSA-2a/b (Invasion) [Babesia bovis]
Length = 270
Score = 22.7 bits (47), Expect = 2.9, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 18 SSRFTKTKKPKHETTTPAINATEEIENDPAPAHCPK 53
SS+ T T +P ++ P +A PA PK
Sbjct: 211 SSQGTTTTRPSQDSAAPNTSAGNLNGQPSKPAETPK 246
>M.Javanica_Scaff19054g080035 on AAF14193 SBP3 (Others) [Babesia bovis]
Length = 1089
Score = 22.7 bits (47), Expect = 3.6, Method: Composition-based stats.
Identities = 11/47 (23%), Positives = 22/47 (46%), Gaps = 6/47 (12%)
Query: 26 KPKHETTTPAINATEEIENDPAPAHCPKCHNYCECGYYQCRGCWCNE 72
K ++++ T N + + +D + +CH C+C C CN+
Sbjct: 622 KHEYDSHTGGYNVGKNLPHDRECSGSTECHCPCKC------KCTCNQ 662
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff21949g085322
(403 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_654447 Igl1 (Adhesin) [Entamoeba histolytica] 30 0.21
XP_652394 Igl2 (Adhesin) [Entamoeba histolytica] 28 0.77
XP_001351318 PfEMP1 (Establishment) [Plasmodium falciparum] 25 8.5
>M.Javanica_Scaff21949g085322 on XP_654447 Igl1 (Adhesin) [Entamoeba histolytica]
Length = 1101
Score = 30.4 bits (67), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 34/97 (35%), Gaps = 5/97 (5%)
Query: 288 SRIGDISA-----GLQTEQPQARCAQCKMNWYKQKEGDQQQSGTAEHPCAKCDPKRIKEE 342
SR G I A G P + C C + Y KEG++ + CA C K
Sbjct: 797 SRTGFIYATECSDGFSGRSPYSNCTTCTKSNYYPKEGEKNGCAKCDDKCATCSDKDTCLT 856
Query: 343 TLDRQTVMRAMLKCGSEQQMIEGKQQESPNSCQLDSS 379
D V C + M G+ + N C SS
Sbjct: 857 CADPLKVGSKCDGCKTGYYMSNGECKPCTNHCSECSS 893
>M.Javanica_Scaff21949g085322 on XP_652394 Igl2 (Adhesin) [Entamoeba histolytica]
Length = 1105
Score = 28.5 bits (62), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 35/97 (36%), Gaps = 5/97 (5%)
Query: 288 SRIGDISA-----GLQTEQPQARCAQCKMNWYKQKEGDQQQSGTAEHPCAKCDPKRIKEE 342
SR G I A G P + C C + Y KEG++ + CA C K
Sbjct: 801 SRTGYIYATECSDGFSGRSPYSNCTTCIESNYYPKEGEKNGCAKCDDKCATCSDKDTCLT 860
Query: 343 TLDRQTVMRAMLKCGSEQQMIEGKQQESPNSCQLDSS 379
D + +C + M G+ + N C SS
Sbjct: 861 CTDPLKIGSKCDECKTGYYMSNGECKPCTNHCSECSS 897
>M.Javanica_Scaff21949g085322 on XP_001351318 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2169
Score = 25.4 bits (54), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 10/75 (13%)
Query: 51 RAPNFQEGTVYHYSYDAQVESGLSTVDESGTTTQ----------TSDNGQQAVTRIQSQV 100
AP G +Y +YD SG +++ + DNGQQ T + ++
Sbjct: 1101 HAPYIWNGMIYALTYDTNTASGEKKIEKDDAVYKKLWDEANNKPKKDNGQQDYTYEKVEI 1160
Query: 101 KVYFASQRRALLCMT 115
K + Q+ + T
Sbjct: 1161 KEEDSGQKASTASQT 1175
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1939g019478
(247 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum] 26 2.0
XP_815905 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.3
>M.Javanica_Scaff1939g019478 on XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum]
Length = 3130
Score = 26.2 bits (56), Expect = 2.0, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 13/23 (56%)
Query: 159 FVDANVLFHFSLRFNETQFILNT 181
F+D LFH NE Q ILNT
Sbjct: 703 FLDTKYLFHEKKSVNELQTILNT 725
>M.Javanica_Scaff1939g019478 on XP_815905 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 888
Score = 25.4 bits (54), Expect = 4.3, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 9/73 (12%)
Query: 180 NTWIVGKGWEVESRYRPKGFDFKVGESFFLEILPSSNNWIHAFVNGSPFG------ISRY 233
N WI+ G +Y D++ S + +L + N A+V+G P G +
Sbjct: 615 NKWILLCGGRENKKYSS---DWETNTSEHMVVLLRNGNQSSAYVDGQPVGGDEKCNLENT 671
Query: 234 DLSKVSQMSIEGD 246
D +S I GD
Sbjct: 672 DSKGISHFLIGGD 684
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff21464g084488
(186 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAK31241 variable surface protein 42c (Establishment) [Giardi... 26 0.86
XP_811916 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.8
XP_809218 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.9
XP_811683 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.1
ABA06448 MSA-2a/b T-1 (Invasion) [Babesia bovis] 24 4.3
XP_819341 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.5
XP_820183 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 7.7
XP_806519 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 9.1
BAA96736 Cruzipain (Cysteine protease) [Trypanosoma cruzi] 22 9.7
>M.Javanica_Scaff21464g084488 on AAK31241 variable surface protein 42c (Establishment) [Giardia
duodenalis]
Length = 128
Score = 25.8 bits (55), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 10/63 (15%)
Query: 109 NDPICMSKCVKI---TYKCVGCSAAKTLTVPINNKCPECAINHVDLSI----DAFKWLEP 161
N P C C K T C C A L+ N+KC +C+ N D +I + EP
Sbjct: 19 NCPTCAEGCAKCQSSTSTCTECLAGYYLS---NSKCVKCSENSADGNIKGVPNCVSCKEP 75
Query: 162 QGG 164
GG
Sbjct: 76 SGG 78
>M.Javanica_Scaff21464g084488 on XP_811916 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 685
Score = 25.4 bits (54), Expect = 2.8, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 24/88 (27%)
Query: 105 RYLFNDPICMSKCVKITYKCVGCSAAKTLTVPINNKCPECAINHVDL-SIDAFKWLE--- 160
R+LFN + + + +T C G A N DL S+ +W++
Sbjct: 3 RHLFNSAVLL---LLVTTMCCGTGGATPAKENDGNS---------DLRSVQELQWVDLFV 50
Query: 161 PQ--------GGTVGIAKDANKSPTLIA 180
PQ GGT G +DA SP+L++
Sbjct: 51 PQTTPVLPEGGGTPGTKRDAFVSPSLVS 78
>M.Javanica_Scaff21464g084488 on XP_809218 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 792
Score = 25.0 bits (53), Expect = 2.9, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 11/40 (27%)
Query: 152 SIDAFKWLE---PQ--------GGTVGIAKDANKSPTLIA 180
S++ +W++ PQ GGT G +DA SP+L++
Sbjct: 77 SVEGLQWVDLFVPQTTPVLPEGGGTPGTKRDAFASPSLVS 116
>M.Javanica_Scaff21464g084488 on XP_811683 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 725
Score = 25.0 bits (53), Expect = 3.1, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 11/40 (27%)
Query: 152 SIDAFKWLE---PQ--------GGTVGIAKDANKSPTLIA 180
S++ +W++ PQ GGT G +DA SP+L++
Sbjct: 77 SVEGLQWVDLFVPQTTPVLPEGGGTPGTKRDAFVSPSLVS 116
>M.Javanica_Scaff21464g084488 on ABA06448 MSA-2a/b T-1 (Invasion) [Babesia bovis]
Length = 284
Score = 24.3 bits (51), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 5/38 (13%)
Query: 40 NPSKASGPI-----TSNLNKPISGSIFTLYGIGGRGAC 72
NPS A P TSNLN P + FT G+ C
Sbjct: 240 NPSHADHPTKPEQSTSNLNGPSKSASFTFGGLTVATLC 277
>M.Javanica_Scaff21464g084488 on XP_819341 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 888
Score = 24.6 bits (52), Expect = 4.5, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 30 PKYTTKDTCLNPSKASGPITSNLNKPISGSIFTLYGIGGRGACG 73
P T+ LNP+KAS P +N+P G++ GG+G G
Sbjct: 725 PLDDTEIAALNPNKASTP--PAVNEPSQGTVIKT-SPGGQGKEG 765
>M.Javanica_Scaff21464g084488 on XP_820183 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 721
Score = 23.9 bits (50), Expect = 7.7, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Query: 105 RYLFNDPICMSKCVKITYKCVGCSAAKTLTVPINNKCPEC-AINHVDLSIDAFKWLEPQG 163
R+LFN I + + T C C A N+ + VDL + + P+G
Sbjct: 41 RHLFNFAILL---LVTTMCCATCGATPAKENDGNSDLRSVHELQWVDLFLPNQTQVVPKG 97
Query: 164 G-TVGIAKDANKSPTLIA 180
G T G +DA SP+L++
Sbjct: 98 GGTPGTKRDAFVSPSLVS 115
>M.Javanica_Scaff21464g084488 on XP_806519 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 912
Score = 23.5 bits (49), Expect = 9.1, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 40 NPSKASGPITSNLNKPISGSIFTLYGIGGRGACGLDIDAPKMSAAVSGSLFNNAAQW 96
N +A P ++ P + + T + G+G GL + AA S N++QW
Sbjct: 830 NKMQAGQPTQFSVGTPDAANAAT-HNAEGKGQDGLHPQVKEAEAATPSSSLLNSSQW 885
>M.Javanica_Scaff21464g084488 on BAA96736 Cruzipain (Cysteine protease) [Trypanosoma cruzi]
Length = 70
Score = 22.3 bits (46), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 76 IDAPKMSAAVSGSLFNNAAQWV 97
+ K + SG L NNA +W+
Sbjct: 35 VSCDKTDSGCSGGLMNNAFEWI 56
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff17133g076054
(62 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609167 variant erythrocyte surface antigen-1, alpha subun... 27 0.090
XP_001609041 variant erythrocyte surface antigen-1, alpha subun... 25 0.27
XP_001611365 variant erythrocyte surface antigen-1, alpha subun... 25 0.44
XP_001609450 variant erythrocyte surface antigen-1, alpha subun... 23 1.1
XP_001610568 variant erythrocyte surface antigen-1, alpha subun... 23 1.4
XP_001609163 variant erythrocyte surface antigen-1, alpha subun... 23 1.5
XP_001609751 variant erythrocyte surface antigen-1, alpha subun... 23 1.8
XP_001609040 variant erythrocyte surface antigen-1, alpha subun... 23 1.8
XP_001609540 variant erythrocyte surface antigen-1, alpha subun... 22 3.5
XP_001351564 PfEMP1 (Establishment) [Plasmodium falciparum] 22 3.6
XP_001610196 variant erythrocyte surface antigen-1, alpha subun... 22 3.8
AAS46325 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 22 4.2
AAS46316 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 22 4.2
AAS46317 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 22 4.2
AAS46318 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 22 4.2
AAS46326 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 22 4.2
AAS46323 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 22 4.2
BAC44837 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 22 4.2
AAS46319 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 22 4.2
AAS46309 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 22 4.3
AAS46311 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 22 4.3
AAS46315 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 22 4.3
AAS46324 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 22 4.3
XP_001609754 variant erythrocyte surface antigen-1, alpha subun... 22 5.3
XP_001610721 variant erythrocyte surface antigen-1, alpha subun... 22 5.5
AAK19757 MIC8 (Invasion) [Toxoplasma gondii] 21 8.2
XP_001347690 PfEMP1 (Establishment) [Plasmodium falciparum] 21 9.2
>M.Javanica_Scaff17133g076054 on XP_001609167 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1317
Score = 26.6 bits (57), Expect = 0.090, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 8/55 (14%)
Query: 1 MSPLKNKFLTKIF-----IYLN---YLFIQLINGQQQQSQPFQSEECKKAATNCE 47
+SPL + T + YL+ YL L +G + SQ FQ EC+ NC+
Sbjct: 1083 VSPLTGELYTAVSATFGGTYLSWVLYLSDALHSGLESLSQEFQQIECRGCKGNCD 1137
>M.Javanica_Scaff17133g076054 on XP_001609041 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1318
Score = 25.0 bits (53), Expect = 0.27, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 8/55 (14%)
Query: 1 MSPLKNKFLTKIF-----IYLN---YLFIQLINGQQQQSQPFQSEECKKAATNCE 47
+SPL + T + YL+ YL L G + S+ FQ EC+ NC+
Sbjct: 1083 LSPLTGELYTAVSATFGGTYLSWVLYLSDALQGGLESLSEAFQQIECRGCKGNCD 1137
>M.Javanica_Scaff17133g076054 on XP_001611365 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1335
Score = 24.6 bits (52), Expect = 0.44, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 8/55 (14%)
Query: 1 MSPLKNKFLTKIF-----IYLN---YLFIQLINGQQQQSQPFQSEECKKAATNCE 47
+SPL + T + YL+ YL L +G + S+ F++ EC+ NC+
Sbjct: 1100 LSPLTGELYTAVSATFGGTYLSWVLYLSDALHSGLESLSEAFRNIECRGCKGNCD 1154
>M.Javanica_Scaff17133g076054 on XP_001609450 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1309
Score = 23.5 bits (49), Expect = 1.1, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 8/55 (14%)
Query: 1 MSPLKNKFLTKIF-----IYLN---YLFIQLINGQQQQSQPFQSEECKKAATNCE 47
+SPL + T + YL+ YL L +G + S+ FQ EC+ C+
Sbjct: 1072 LSPLTGELYTAVSATFGNTYLSWVLYLSDALHSGLESLSEAFQQIECRGCKGQCD 1126
>M.Javanica_Scaff17133g076054 on XP_001610568 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1329
Score = 23.1 bits (48), Expect = 1.4, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 8/55 (14%)
Query: 1 MSPLKNKFLTKIF-----IYLN---YLFIQLINGQQQQSQPFQSEECKKAATNCE 47
+SPL + T + YL+ YL L +G + S+ FQ EC+ C+
Sbjct: 1102 LSPLTGELYTVVSATFGGTYLSWVLYLSDALHSGLESLSEAFQQIECRGCKGQCD 1156
>M.Javanica_Scaff17133g076054 on XP_001609163 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1360
Score = 23.1 bits (48), Expect = 1.5, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 8/55 (14%)
Query: 1 MSPLKNKFLTKIF-----IYLN---YLFIQLINGQQQQSQPFQSEECKKAATNCE 47
+SPL + T + YL+ YL L G Q S+ FQ EC+ C+
Sbjct: 1129 LSPLTGELYTAVSATFGNTYLSWVLYLSDALHWGLQSLSEAFQQIECRGCKGQCD 1183
>M.Javanica_Scaff17133g076054 on XP_001609751 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1298
Score = 22.7 bits (47), Expect = 1.8, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 8/55 (14%)
Query: 1 MSPLKNKFLTKIF-----IYLN---YLFIQLINGQQQQSQPFQSEECKKAATNCE 47
+SPL + T + +YL+ YL L G Q S F++ EC+ C+
Sbjct: 1063 VSPLTGELYTAVSATFGNVYLSWVLYLSDALEGGLQSLSDAFRNIECRGCKGQCD 1117
>M.Javanica_Scaff17133g076054 on XP_001609040 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1335
Score = 22.7 bits (47), Expect = 1.8, Method: Composition-based stats.
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 38 ECKKAATNCENSTDC 52
+CK A+ C +++DC
Sbjct: 198 QCKGGASGCTSASDC 212
>M.Javanica_Scaff17133g076054 on XP_001609540 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1349
Score = 21.9 bits (45), Expect = 3.5, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 8/55 (14%)
Query: 1 MSPLKNKFLTKIF-----IYLN---YLFIQLINGQQQQSQPFQSEECKKAATNCE 47
+SPL + T + YL+ YL L +G + S+ F++ EC+ C+
Sbjct: 1115 LSPLTGELYTAVSATFGNTYLSWVLYLSDALHSGLESLSEAFRNIECRGCKGQCD 1169
>M.Javanica_Scaff17133g076054 on XP_001351564 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2207
Score = 21.9 bits (45), Expect = 3.6, Method: Composition-based stats.
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 27 QQQQSQPFQSEECKKAATNCENSTD 51
+QQ++ Q + C+K + EN +D
Sbjct: 1302 KQQKAYEQQKKNCEKESEGVENKSD 1326
>M.Javanica_Scaff17133g076054 on XP_001610196 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1330
Score = 21.9 bits (45), Expect = 3.8, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 8/55 (14%)
Query: 1 MSPLKNKFLTKIF-----IYLN---YLFIQLINGQQQQSQPFQSEECKKAATNCE 47
+SPL + T + YL+ YL L +G + S+ F++ EC+ C+
Sbjct: 1097 LSPLTGELYTAVSATFGGTYLSWVLYLSDALHSGLESLSEAFRNIECRGCKGQCD 1151
>M.Javanica_Scaff17133g076054 on AAS46325 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 668
Score = 21.9 bits (45), Expect = 4.2, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 9 LTKIFIYLNYLFIQLINGQQQQSQPFQSEECKKAATNCENSTD 51
TKIF L+ LF + + Q +++E +N E++TD
Sbjct: 616 FTKIFDQLDKLFKERCSCMDTQVLEVKNKEMLSIDSNSEDATD 658
>M.Javanica_Scaff17133g076054 on AAS46316 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 671
Score = 21.9 bits (45), Expect = 4.2, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 9 LTKIFIYLNYLFIQLINGQQQQSQPFQSEECKKAATNCENSTD 51
TKIF L+ LF + + Q +++E +N E++TD
Sbjct: 616 FTKIFDQLDKLFKERCSCMDTQVLEVKNKEMLSIDSNSEDATD 658
>M.Javanica_Scaff17133g076054 on AAS46317 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 672
Score = 21.9 bits (45), Expect = 4.2, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 9 LTKIFIYLNYLFIQLINGQQQQSQPFQSEECKKAATNCENSTD 51
TKIF L+ LF + + Q +++E +N E++TD
Sbjct: 616 FTKIFDQLDKLFKERCSCMDTQVLEVKNKEMLSIDSNSEDATD 658
>M.Javanica_Scaff17133g076054 on AAS46318 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 672
Score = 21.9 bits (45), Expect = 4.2, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 9 LTKIFIYLNYLFIQLINGQQQQSQPFQSEECKKAATNCENSTD 51
TKIF L+ LF + + Q +++E +N E++TD
Sbjct: 616 FTKIFDQLDKLFKERCSCMDTQVLEVKNKEMLSIDSNSEDATD 658
>M.Javanica_Scaff17133g076054 on AAS46326 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 672
Score = 21.9 bits (45), Expect = 4.2, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 9 LTKIFIYLNYLFIQLINGQQQQSQPFQSEECKKAATNCENSTD 51
TKIF L+ LF + + Q +++E +N E++TD
Sbjct: 616 FTKIFDQLDKLFKERCSCMDTQVLEVKNKEMLSIDSNSEDATD 658
>M.Javanica_Scaff17133g076054 on AAS46323 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 673
Score = 21.9 bits (45), Expect = 4.2, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 9 LTKIFIYLNYLFIQLINGQQQQSQPFQSEECKKAATNCENSTD 51
TKIF L+ LF + + Q +++E +N E++TD
Sbjct: 616 FTKIFDQLDKLFKERCSCMDTQVLEVKNKEMLSIDSNSEDATD 658
>M.Javanica_Scaff17133g076054 on BAC44837 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 1566
Score = 21.9 bits (45), Expect = 4.2, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 9 LTKIFIYLNYLFIQLINGQQQQSQPFQSEECKKAATNCENSTD 51
TKIF L+ LF + + Q +++E +N E++TD
Sbjct: 709 FTKIFDQLDKLFKERCSCMDTQVLEVKNKEMLSIDSNSEDATD 751
>M.Javanica_Scaff17133g076054 on AAS46319 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 673
Score = 21.9 bits (45), Expect = 4.2, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 9 LTKIFIYLNYLFIQLINGQQQQSQPFQSEECKKAATNCENSTD 51
TKIF L+ LF + + Q +++E +N E++TD
Sbjct: 616 FTKIFDQLDKLFKERCSCMDTQVLEVKNKEMLSIDSNSEDATD 658
>M.Javanica_Scaff17133g076054 on AAS46309 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 663
Score = 21.9 bits (45), Expect = 4.3, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 9 LTKIFIYLNYLFIQLINGQQQQSQPFQSEECKKAATNCENSTD 51
TKIF L+ LF + + Q +++E +N E++TD
Sbjct: 611 FTKIFDQLDKLFKERCSCMDTQVLEVKNKEMLSIDSNSEDATD 653
>M.Javanica_Scaff17133g076054 on AAS46311 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 668
Score = 21.9 bits (45), Expect = 4.3, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 9 LTKIFIYLNYLFIQLINGQQQQSQPFQSEECKKAATNCENSTD 51
TKIF L+ LF + + Q +++E +N E++TD
Sbjct: 616 FTKIFDQLDKLFKERCSCMDTQVLEVKNKEMLSIDSNSEDATD 658
>M.Javanica_Scaff17133g076054 on AAS46315 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 671
Score = 21.9 bits (45), Expect = 4.3, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 9 LTKIFIYLNYLFIQLINGQQQQSQPFQSEECKKAATNCENSTD 51
TKIF L+ LF + + Q +++E +N E++TD
Sbjct: 616 FTKIFDQLDKLFKERCSCMDTQVLEVKNKEMLSIDSNSEDATD 658
>M.Javanica_Scaff17133g076054 on AAS46324 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 673
Score = 21.9 bits (45), Expect = 4.3, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 9 LTKIFIYLNYLFIQLINGQQQQSQPFQSEECKKAATNCENSTD 51
TKIF L+ LF + + Q +++E +N E++TD
Sbjct: 616 FTKIFDQLDKLFKERCSCMDTQVLEVKNKEMLSIDSNSEDATD 658
>M.Javanica_Scaff17133g076054 on XP_001609754 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1295
Score = 21.6 bits (44), Expect = 5.3, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 8/55 (14%)
Query: 1 MSPLKNKFLTKIF-----IYLN---YLFIQLINGQQQQSQPFQSEECKKAATNCE 47
+SPL + T + YL+ YL L G + S+ FQ EC C+
Sbjct: 1073 VSPLTGELYTAVSATFGGTYLSWVLYLSDALEGGLKSLSEAFQQIECNACKGQCD 1127
>M.Javanica_Scaff17133g076054 on XP_001610721 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1331
Score = 21.6 bits (44), Expect = 5.5, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 8/55 (14%)
Query: 1 MSPLKNKFLTKIF-----IYLN---YLFIQLINGQQQQSQPFQSEECKKAATNCE 47
+SPL + T + YL+ YL L +G + S+ F++ EC+ C+
Sbjct: 1092 VSPLTGELYTAVSATFGGTYLSWVLYLSDALHSGLESLSEAFRNIECRGCKGQCD 1146
>M.Javanica_Scaff17133g076054 on AAK19757 MIC8 (Invasion) [Toxoplasma gondii]
Length = 255
Score = 20.8 bits (42), Expect = 8.2, Method: Composition-based stats.
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 39 CKKAATNCENSTDCVH 54
CK+ NC+ + CVH
Sbjct: 129 CKRFQENCDVNAICVH 144
>M.Javanica_Scaff17133g076054 on XP_001347690 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 20.8 bits (42), Expect = 9.2, Method: Composition-based stats.
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 34 FQSEECKKAATNCEN 48
F+ +CKK C+N
Sbjct: 358 FEGADCKKCTVTCDN 372
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff20873g083463
(100 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum] 25 0.74
XP_812082 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.4
XP_815267 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.4
XP_807308 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.4
XP_804548 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.1
XP_806454 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.1
XP_807593 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.4
AAK19757 MIC8 (Invasion) [Toxoplasma gondii] 23 2.5
XP_816523 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.6
XP_807431 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.0
XP_809902 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 6.2
XP_806228 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 6.6
XP_817001 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 7.2
>M.Javanica_Scaff20873g083463 on XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2178
Score = 25.4 bits (54), Expect = 0.74, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 8/38 (21%)
Query: 34 CGPTFADRLLRTDI--CGLRTDFCGSDICGPPEPATVD 69
CG + +R D+ CG ++CG DIC EP T D
Sbjct: 1386 CGSANIFKGIRKDVWKCG---EYCGVDIC---EPNTFD 1417
>M.Javanica_Scaff20873g083463 on XP_812082 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 554
Score = 24.6 bits (52), Expect = 1.4, Method: Composition-based stats.
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 57 SDICGPPEPATVDSPR 72
S IC P +PAT+ S R
Sbjct: 418 SSICTPADPATLSSER 433
>M.Javanica_Scaff20873g083463 on XP_815267 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 718
Score = 24.6 bits (52), Expect = 1.4, Method: Composition-based stats.
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 57 SDICGPPEPATVDSPR 72
S IC P +PAT+ S R
Sbjct: 418 SSICTPADPATLSSER 433
>M.Javanica_Scaff20873g083463 on XP_807308 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 717
Score = 24.6 bits (52), Expect = 1.4, Method: Composition-based stats.
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 57 SDICGPPEPATVDSPRG 73
S IC P +P T+ S RG
Sbjct: 418 SSICTPADPDTLSSERG 434
>M.Javanica_Scaff20873g083463 on XP_804548 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 691
Score = 23.9 bits (50), Expect = 2.1, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 14/33 (42%), Gaps = 2/33 (6%)
Query: 57 SDICGPPEPATVDSPRGACRKTPREARGFASFI 89
S IC P +PA S RG P G F+
Sbjct: 414 SSICTPADPAASSSKRGC--GPPFPTAGLVGFL 444
>M.Javanica_Scaff20873g083463 on XP_806454 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 694
Score = 23.9 bits (50), Expect = 2.1, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 14/33 (42%), Gaps = 2/33 (6%)
Query: 57 SDICGPPEPATVDSPRGACRKTPREARGFASFI 89
S IC P +PA S RG P G F+
Sbjct: 414 SSICTPADPAASSSKRGC--GPPFPTAGLVGFL 444
>M.Javanica_Scaff20873g083463 on XP_807593 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 715
Score = 23.9 bits (50), Expect = 2.4, Method: Composition-based stats.
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 57 SDICGPPEPATVDSPRG 73
S IC P +PA S RG
Sbjct: 418 SSICTPADPAASSSERG 434
>M.Javanica_Scaff20873g083463 on AAK19757 MIC8 (Invasion) [Toxoplasma gondii]
Length = 255
Score = 23.5 bits (49), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 46 DICGLRTDFCGSDICGPP 63
+ C + DFC + CGPP
Sbjct: 206 ETCKAKPDFCAEEPCGPP 223
>M.Javanica_Scaff20873g083463 on XP_816523 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 892
Score = 23.5 bits (49), Expect = 3.6, Method: Composition-based stats.
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 57 SDICGPPEPATVDSPRG 73
S IC P +PA S RG
Sbjct: 425 SSICTPADPAASSSERG 441
>M.Javanica_Scaff20873g083463 on XP_807431 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 940
Score = 23.1 bits (48), Expect = 4.0, Method: Composition-based stats.
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 57 SDICGPPEPATVDSPRG 73
S IC P +PA S RG
Sbjct: 425 SSICTPADPAASSSERG 441
>M.Javanica_Scaff20873g083463 on XP_809902 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 955
Score = 22.7 bits (47), Expect = 6.2, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 57 SDICGPPEPATVDSPRGACRKTPREARGFASFILAPYLLHPW 98
S +C P A SP AC T + G F+ + + W
Sbjct: 503 SKLC-PSSAAESASPEDACSPTVKITDGLVGFLSGNFSDNTW 543
>M.Javanica_Scaff20873g083463 on XP_806228 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1204
Score = 22.7 bits (47), Expect = 6.6, Method: Composition-based stats.
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 57 SDICGPPEPATVDSPRG 73
S IC P +PA S RG
Sbjct: 425 SSICTPADPAASSSERG 441
>M.Javanica_Scaff20873g083463 on XP_817001 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 928
Score = 22.3 bits (46), Expect = 7.2, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 57 SDICGPPEPATVDSPRGACRKTPREARGFASFILAPYLLHPW 98
S++C V SP AC+ T + G F+ + W
Sbjct: 478 SELCPSESAVQVTSPESACKNT-KITDGLVGFLSGNFSDDTW 518
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff19798g081499
(143 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_813585 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.4
XP_803984 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.5
XP_812044 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.2
XP_821137 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.3
XP_806844 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.5
XP_811687 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.7
XP_820183 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.9
XP_815971 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.6
XP_802664 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.9
XP_808669 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 6.2
XP_811704 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 6.3
XP_816855 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 7.7
XP_816852 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 7.8
XP_806901 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 8.1
XP_809283 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 9.3
>M.Javanica_Scaff19798g081499 on XP_813585 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 800
Score = 25.4 bits (54), Expect = 1.4, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 68 DGKATLSEGTVEVNETNLELYSNHSGACEV 97
DGK+ E T ET LEL+ GAC++
Sbjct: 637 DGKSLGEEETPLTGETPLELFGFCFGACDI 666
>M.Javanica_Scaff19798g081499 on XP_803984 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 794
Score = 25.4 bits (54), Expect = 1.5, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 45 LGQVKGDDDGDGIPVGFFNHTLKDGKATLS 74
L QVKGD + + + LK K+TLS
Sbjct: 444 LSQVKGDHESTAVSLAHLTEELKTIKSTLS 473
>M.Javanica_Scaff19798g081499 on XP_812044 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 855
Score = 24.3 bits (51), Expect = 3.2, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 68 DGKATLSEGTVEVNETNLELYSNHSGACEV 97
DGK+ E T ET LEL+ GAC++
Sbjct: 656 DGKSLGEEETPLKGETPLELFGFCFGACDI 685
>M.Javanica_Scaff19798g081499 on XP_821137 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 956
Score = 24.3 bits (51), Expect = 3.3, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 10/90 (11%)
Query: 54 GDGIPVGFFNHTLKDGKATLSEGTVEVNETNLELYSNHSGACEVTFEGNFIVLHYKRESK 113
GDG+ G T +G V V TN+ LY+ + ++T + + RE+K
Sbjct: 710 GDGVKAG----------NTEGQGGVSVTVTNVLLYNRPLSSEKITALNTKLSISKAREAK 759
Query: 114 AARGGCTSGLAHQSSKHDLLYDRSGEQRRD 143
+ G + Q++ GEQ+++
Sbjct: 760 TVKEGIPPVASKQATPEAETPSILGEQQQN 789
>M.Javanica_Scaff19798g081499 on XP_806844 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 740
Score = 23.9 bits (50), Expect = 4.5, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 15/29 (51%)
Query: 68 DGKATLSEGTVEVNETNLELYSNHSGACE 96
DGK E T+ ET LEL GACE
Sbjct: 638 DGKLLGEEETMLTGETPLELVRFCFGACE 666
>M.Javanica_Scaff19798g081499 on XP_811687 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 722
Score = 23.9 bits (50), Expect = 4.7, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 16/30 (53%)
Query: 68 DGKATLSEGTVEVNETNLELYSNHSGACEV 97
DGK E T+ ET LEL GACE+
Sbjct: 638 DGKLLGEEVTLLTGETPLELAGFCFGACEM 667
>M.Javanica_Scaff19798g081499 on XP_820183 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 721
Score = 23.9 bits (50), Expect = 4.9, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 68 DGKATLSEGTVEVNETNLELYSNHSGACEV 97
DG++ E T+ E LEL S GACE+
Sbjct: 637 DGQSLGEEETLLTGEKPLELVSFCFGACEM 666
>M.Javanica_Scaff19798g081499 on XP_815971 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 550
Score = 23.5 bits (49), Expect = 5.6, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 45 LGQVKGDDDGDGIPVGFFNHTLKDGKATLS 74
L Q KGD + + + LK K+TLS
Sbjct: 444 LSQAKGDHESTAVSLAHLTEELKTIKSTLS 473
>M.Javanica_Scaff19798g081499 on XP_802664 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 367
Score = 23.5 bits (49), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 6/34 (17%)
Query: 29 TNILPTLFASLVFLFLL------GQVKGDDDGDG 56
+N+ +FAS V LFL+ G VK D+ G
Sbjct: 37 SNVSRRVFASAVLLFLVICCATGGAVKADEPTSG 70
>M.Javanica_Scaff19798g081499 on XP_808669 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 533
Score = 23.5 bits (49), Expect = 6.2, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 45 LGQVKGDDDGDGIPVGFFNHTLKDGKATLS 74
L Q KGD + + + LK K+TLS
Sbjct: 443 LSQAKGDHESTAVSLAHLTEELKTIKSTLS 472
>M.Javanica_Scaff19798g081499 on XP_811704 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 745
Score = 23.5 bits (49), Expect = 6.3, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 45 LGQVKGDDDGDGIPVGFFNHTLKDGKATLS 74
L Q KGD + + + LK K+TLS
Sbjct: 444 LSQAKGDHESTAVSLAHLTEELKTIKSTLS 473
>M.Javanica_Scaff19798g081499 on XP_816855 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 754
Score = 23.1 bits (48), Expect = 7.7, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 68 DGKATLSEGTVEVNETNLELYSNHSGAC 95
DGK+ E T+ ET LEL GAC
Sbjct: 600 DGKSLGEEETMVTGETPLELAGFCFGAC 627
>M.Javanica_Scaff19798g081499 on XP_816852 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 739
Score = 23.1 bits (48), Expect = 7.8, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 68 DGKATLSEGTVEVNETNLELYSNHSGAC 95
DGK+ E T+ ET LEL GAC
Sbjct: 638 DGKSLGEEETMVTGETPLELAGFCFGAC 665
>M.Javanica_Scaff19798g081499 on XP_806901 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 369
Score = 23.1 bits (48), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 72 TLSEGTVEVNETNLELYSNHSGACEVTFEGNFIVLHYKRESKAAR 116
T S+G V V TN+ LY+ + E+T + + R+ KA +
Sbjct: 143 TESQGGVSVTVTNVLLYNRPLSSEEITALNTKLSIPKARDEKAVK 187
>M.Javanica_Scaff19798g081499 on XP_809283 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 844
Score = 23.1 bits (48), Expect = 9.3, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Query: 15 SGTRKSSSFLRSSTTNILPTLFASLVFLFLLGQV---KGDDDGDGIPV 59
SG R+ N+ +FAS V LFL+ + G GDG P+
Sbjct: 24 SGRRREGRESEPQRPNMSRRVFASAVLLFLVVMMCCGNGVAQGDGPPL 71
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff162g002813
(181 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_806228 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.36
XP_816523 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.37
XP_827742 VSG (Establishment) [Trypanosoma brucei] 27 0.90
XP_001350082 Rh2b (Adhesin) [Plasmodium falciparum] 27 1.1
XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum] 25 3.3
>M.Javanica_Scaff162g002813 on XP_806228 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1204
Score = 28.1 bits (61), Expect = 0.36, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 9/92 (9%)
Query: 17 PDSGSLYASPSSVQSSSFASTQPSPAMMAL--KPETKIISPQYAIPNIPTFVS-HSYQTQ 73
P S +++PS+ SS ST +PA + P T + S + P+ P S HS +
Sbjct: 800 PVDSSAHSTPSTPVDSSAHSTPSTPADSSAHGTPSTPVDSSAHGTPSTPVDSSAHSTPST 859
Query: 74 NLQKFVQSAFSAAAEGGIGRIRSANKRPSKPV 105
+ S S A+ SA+ PS PV
Sbjct: 860 PVDSSAHSTPSTPADS------SAHGTPSTPV 885
>M.Javanica_Scaff162g002813 on XP_816523 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 892
Score = 27.7 bits (60), Expect = 0.37, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 9/91 (9%)
Query: 17 PDSGSLYASPSSVQSSSFASTQPSPAMMAL--KPETKIISPQYAIPNIPTFVS-HSYQTQ 73
P S +++PS+ SS ST +PA + P T + S ++ P+ P S HS +
Sbjct: 764 PVDSSAHSTPSTTADSSAHSTPSTPADSSAHSTPSTPVDSSAHSTPSTPADSSAHSTPST 823
Query: 74 NLQKFVQSAFSAAAEGGIGRIRSANKRPSKP 104
+ S S + SA+ PS P
Sbjct: 824 PVDSSAHSTPSTPVDS------SAHGTPSTP 848
>M.Javanica_Scaff162g002813 on XP_827742 VSG (Establishment) [Trypanosoma brucei]
Length = 505
Score = 26.6 bits (57), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 12/47 (25%), Positives = 24/47 (51%)
Query: 103 KPVPDEKKDEAYKERRRKNNDSARRSRELRRRKEDEIQQRNNELERE 149
KP D KK+ A K+ +K+ D+ + + +ED+ + + +E
Sbjct: 430 KPEGDAKKNAADKKEEKKDGDNKTTAADFTGTEEDKCDKTKCDWNKE 476
>M.Javanica_Scaff162g002813 on XP_001350082 Rh2b (Adhesin) [Plasmodium falciparum]
Length = 1115
Score = 26.6 bits (57), Expect = 1.1, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 107 DEKKDEAYKERRRKNNDSARRSRELRRRKEDEIQQRN-NELERE 149
+E K + + R+ + ++ ELR++++++ QQRN ELE +
Sbjct: 611 EELKRQEQERLEREKQEQLQKEEELRKKEQEKQQQRNIQELEEQ 654
>M.Javanica_Scaff162g002813 on XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum]
Length = 3130
Score = 25.0 bits (53), Expect = 3.3, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 108 EKKDEAYKERRRKNNDSARRSRELRRRKEDEIQQRNNE-LERE-NARLRQEINVLRFEIF 165
E++ + ++ R + ++ +R + R +KE+E++++ E LERE +L++E + R E
Sbjct: 2772 EEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQERLEREKQEQLQKEEELKRQEQE 2831
Query: 166 QLRQ 169
+L++
Sbjct: 2832 RLQK 2835
Score = 23.5 bits (49), Expect = 9.0, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 107 DEKKDEAYKERRRKNNDSARRSRELRRRKEDEIQQRNNELER-ENARLRQEINVLRFE 163
+E K + + R+ + ++ EL+R +E E Q+ L+R E RL++E + R E
Sbjct: 2801 EELKRQEQERLEREKQEQLQKEEELKR-QEQERLQKEEALKRQEQERLQKEEELKRQE 2857
Score = 23.5 bits (49), Expect = 9.4, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 108 EKKDEAYKERRRKNNDSARRSRELRRRKEDEIQQRNNE-LERENARLRQ 155
E++ + ++ R + ++ +R + R +KE+E++++ E LER+ L +
Sbjct: 2822 EEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQERLERKKIELAE 2870
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2138g020924
(66 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAQ63567 MAHRP1 (Others) [Plasmodium falciparum] 26 0.12
XP_815156 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.6
>M.Javanica_Scaff2138g020924 on AAQ63567 MAHRP1 (Others) [Plasmodium falciparum]
Length = 338
Score = 26.2 bits (56), Expect = 0.12, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Query: 8 VLFLFFIITVVYNINAIEIGMSAEAEL----NNEKMIFKRQIQNKEVN 51
V+FLFF+I ++ IN +G L E+M+ + QN E N
Sbjct: 220 VIFLFFVINILLFINFYNLGKRKGYYLAKKQKKEQMLEQNPEQNPEQN 267
>M.Javanica_Scaff2138g020924 on XP_815156 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 966
Score = 23.1 bits (48), Expect = 1.6, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 22 NAIEIGMSAEAELNNEKMIFKRQIQNKEVNN 52
N + +G+S E E +++F QNKE+++
Sbjct: 623 NPVLLGLSYEKEKKKWRIVFCGDGQNKELSS 653
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff24356g089220
(92 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_811309 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.3
XP_806381 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.4
>M.Javanica_Scaff24356g089220 on XP_811309 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1033
Score = 24.3 bits (51), Expect = 1.3, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 33 DDWEEKREYIYLKNVEIKDRFVLKVIEKKNNQHDSYKNNI 72
DDWE R Y + ++ D + + ++ K H Y N+
Sbjct: 609 DDWEPNRTYQVVLRMDDDDEWTV-FVDGKQIDHKRYDKNL 647
>M.Javanica_Scaff24356g089220 on XP_806381 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1045
Score = 23.1 bits (48), Expect = 3.4, Method: Composition-based stats.
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 29 VKIRDDWEEKREY 41
VK+ DDWE R Y
Sbjct: 618 VKLVDDWEPNRTY 630
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff22890g086900
(238 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_806226 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.1
>M.Javanica_Scaff22890g086900 on XP_806226 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 728
Score = 24.6 bits (52), Expect = 6.1, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 77 FGQKPYKFSLGQGQAMRAMDSAMTDMCVGEQR-RVIIPEGAFGDDER 122
FG KPY+ G +A + S + ++ G R R +I G+ DD+R
Sbjct: 134 FGIKPYEIVAGYIKAAESWPSIVAEVNAGTWRARTVI--GSKNDDDR 178
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff249g003978
(154 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAY44835 MSA-1 (Invasion) [Babesia bovis] 23 6.1
AAY44833 MSA-1 (Invasion) [Babesia bovis] 23 6.1
AAY44838 MSA-1 (Invasion) [Babesia bovis] 23 6.7
>M.Javanica_Scaff249g003978 on AAY44835 MSA-1 (Invasion) [Babesia bovis]
Length = 270
Score = 23.5 bits (49), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 70 EVDAEDKYIKIANED---EIVQTFMNLNKELENGFNEDF 105
++D Y+ +A+ E ++TF NL +LE+ NE+
Sbjct: 27 DIDLPPAYVPVASPGILYEDIKTFYNLMIKLESSLNEEL 65
>M.Javanica_Scaff249g003978 on AAY44833 MSA-1 (Invasion) [Babesia bovis]
Length = 273
Score = 23.5 bits (49), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 7/49 (14%)
Query: 63 SFENVKKE----VDAEDKYIKIANED---EIVQTFMNLNKELENGFNED 104
SF + +E ++ Y+ +A+ + ++TF NL +L +G +ED
Sbjct: 16 SFASCAQENPQSIETPPAYVPVASSSLLYDDIRTFYNLMGKLYDGVDED 64
>M.Javanica_Scaff249g003978 on AAY44838 MSA-1 (Invasion) [Babesia bovis]
Length = 266
Score = 23.5 bits (49), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 70 EVDAEDKYIKIANED---EIVQTFMNLNKELENGFNEDF 105
++D Y+ +A+ E ++TF NL +LE+ NE+
Sbjct: 27 DIDLPPAYVPVASPGILYEDIKTFYNLMIKLESSLNEEL 65
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff21057g083805
(161 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350082 Rh2b (Adhesin) [Plasmodium falciparum] 28 0.25
XP_817875 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.9
XP_808217 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.9
>M.Javanica_Scaff21057g083805 on XP_001350082 Rh2b (Adhesin) [Plasmodium falciparum]
Length = 1115
Score = 28.1 bits (61), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 114 NQKKSKKFLYNAGSAICFLLTF 135
N K F+YNAG +C +L F
Sbjct: 1042 NHNKMDDFVYNAGGVVCCVLFF 1063
>M.Javanica_Scaff21057g083805 on XP_817875 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 935
Score = 25.4 bits (54), Expect = 1.9, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 9/60 (15%)
Query: 1 MGNVSRNTFDAVIKSIIERANGQKSKLSKEQDPDHEAILEAVMDYEEEEDESDDPDPNAV 60
+G VS DA S++ R++G + E E + YE+++D + P P V
Sbjct: 462 IGPVSGKGDDAAASSLLYRSDGSSEANNNE---------ELIALYEKKKDNDEKPSPGVV 512
>M.Javanica_Scaff21057g083805 on XP_808217 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 880
Score = 25.4 bits (54), Expect = 1.9, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 9/60 (15%)
Query: 1 MGNVSRNTFDAVIKSIIERANGQKSKLSKEQDPDHEAILEAVMDYEEEEDESDDPDPNAV 60
+G VS DA S++ R++G + E E + YE+++D + P P V
Sbjct: 409 IGPVSGKGDDAAASSLLYRSDGSSEANNNE---------ELIALYEKKKDNDEKPSPGVV 459
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff17263g076341
(213 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Q4U925 Casein kinase II alpha (Establishment) [Theileria annu... 48 1e-07
XP_001612314 variant erythrocyte surface antigen-1, alpha subun... 28 0.45
>M.Javanica_Scaff17263g076341 on Q4U925 Casein kinase II alpha (Establishment) [Theileria
annulata]
Length = 348
Score = 47.8 bits (112), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 56/103 (54%), Gaps = 7/103 (6%)
Query: 2 HDNGVVHRDLKPENLLYFNQDDDSKIM-ISDFGLSK-TEESGIMATACGTPGYVAPEVL- 58
H G++HRD+KP N++ D + KI+ + D+GL++ + T Y PE+L
Sbjct: 164 HSQGIMHRDIKPHNVMI---DHEKKILRLIDWGLAEFYHPEQEYSVRVATRYYKGPELLV 220
Query: 59 QQKPYGKAVDVWSIG-VIAYILLCGYPPFYDENDANLFAQIIK 100
+ Y ++D+WSIG ++A I+ P FY ++ + +I K
Sbjct: 221 DMRYYDYSLDIWSIGCMLAGIIFKKEPFFYGHDNYDQLVKIAK 263
>M.Javanica_Scaff17263g076341 on XP_001612314 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1308
Score = 28.1 bits (61), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 63 YGKAVDVWSIGVIAYILLCGYPPFYDENDANLFAQIIKGEYEFDSPYWDEISDSAKDFI 121
YGK DV S GVI+++ L G P ++D N Q +KGE + D +++ KD +
Sbjct: 626 YGK--DVVSKGVISWMCL-GCDPM--DHDRNYRVQKVKGELDGVKDKSDGVAEKLKDVL 679
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2073g020445
(278 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001610497 variant erythrocyte surface antigen-1, alpha subun... 26 3.3
>M.Javanica_Scaff2073g020445 on XP_001610497 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1315
Score = 25.8 bits (55), Expect = 3.3, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 168 CDEMEEYEAFRVSELNIKVEANKNVDMATV 197
CD ME RV E+ ++ KNVD V
Sbjct: 633 CDPMEHDRKCRVKEMGKGLDGVKNVDAGAV 662
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff24261g089082
(160 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_817001 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.5
AAW78164 TRAP (Invasion) [Plasmodium falciparum] 24 5.7
AAW78165 TRAP (Invasion) [Plasmodium falciparum] 24 5.7
AAW78141 TRAP (Invasion) [Plasmodium falciparum] 24 5.7
AAW78161 TRAP (Invasion) [Plasmodium falciparum] 24 5.7
AAW78132 TRAP (Invasion) [Plasmodium falciparum] 24 5.7
AAW78136 TRAP (Invasion) [Plasmodium falciparum] 24 5.7
AAW78176 TRAP (Invasion) [Plasmodium falciparum] 24 5.8
AAQ11892 TRAP (Invasion) [Plasmodium falciparum] 24 5.9
AAA29771 TRAP (Invasion) [Plasmodium falciparum] 24 5.9
AAA29775 TRAP (Invasion) [Plasmodium falciparum] 24 5.9
AAW78159 TRAP (Invasion) [Plasmodium falciparum] 24 5.9
AAW78162 TRAP (Invasion) [Plasmodium falciparum] 24 5.9
AAW78166 TRAP (Invasion) [Plasmodium falciparum] 24 6.2
AAW78135 TRAP (Invasion) [Plasmodium falciparum] 24 6.2
AAW78160 TRAP (Invasion) [Plasmodium falciparum] 24 6.3
AAW78177 TRAP (Invasion) [Plasmodium falciparum] 24 6.5
>M.Javanica_Scaff24261g089082 on XP_817001 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 928
Score = 25.0 bits (53), Expect = 2.5, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 134 LANGHDLYKRKEFCGLQEDENSEEKEN 160
+ +G D KR+E L E + +EKEN
Sbjct: 420 VTSGTDDNKREELIALYEKKKGDEKEN 446
>M.Javanica_Scaff24261g089082 on AAW78164 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 23.9 bits (50), Expect = 5.7, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 117 SSCQLYSQIVGNGAREVLANGHDLYKRKE 145
++ LY+ + N ARE++ D K KE
Sbjct: 84 NAIHLYANVFSNNAREIIRLHSDASKNKE 112
>M.Javanica_Scaff24261g089082 on AAW78165 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 23.9 bits (50), Expect = 5.7, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 117 SSCQLYSQIVGNGAREVLANGHDLYKRKE 145
++ LY+ + N ARE++ D K KE
Sbjct: 84 NAIHLYANVFSNNAREIIRLHSDASKNKE 112
>M.Javanica_Scaff24261g089082 on AAW78141 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 23.9 bits (50), Expect = 5.7, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 117 SSCQLYSQIVGNGAREVLANGHDLYKRKE 145
++ LY+ + N ARE++ D K KE
Sbjct: 84 NAIHLYANVFSNNAREIIRLHSDASKNKE 112
>M.Javanica_Scaff24261g089082 on AAW78161 TRAP (Invasion) [Plasmodium falciparum]
Length = 554
Score = 23.9 bits (50), Expect = 5.7, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 117 SSCQLYSQIVGNGAREVLANGHDLYKRKE 145
++ LY+ + N ARE++ D K KE
Sbjct: 84 NAIHLYANVFSNNAREIIRLHSDASKNKE 112
>M.Javanica_Scaff24261g089082 on AAW78132 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 23.9 bits (50), Expect = 5.7, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 117 SSCQLYSQIVGNGAREVLANGHDLYKRKE 145
++ LY+ + N ARE++ D K KE
Sbjct: 84 NAIHLYANVFSNNAREIIRLHSDASKNKE 112
>M.Javanica_Scaff24261g089082 on AAW78136 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 23.9 bits (50), Expect = 5.7, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 117 SSCQLYSQIVGNGAREVLANGHDLYKRKE 145
++ LY+ + N ARE++ D K KE
Sbjct: 84 NAIHLYANVFSNNAREIIRLHSDASKNKE 112
>M.Javanica_Scaff24261g089082 on AAW78176 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 23.9 bits (50), Expect = 5.8, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 117 SSCQLYSQIVGNGAREVLANGHDLYKRKE 145
++ LY+ + N ARE++ D K KE
Sbjct: 84 NAIHLYANVFSNNAREIIRLHSDASKNKE 112
>M.Javanica_Scaff24261g089082 on AAQ11892 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 23.9 bits (50), Expect = 5.9, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 117 SSCQLYSQIVGNGAREVLANGHDLYKRKE 145
++ LY+ + N ARE++ D K KE
Sbjct: 84 NAIHLYANVFSNNAREIIRLHSDASKNKE 112
>M.Javanica_Scaff24261g089082 on AAA29771 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 23.9 bits (50), Expect = 5.9, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 117 SSCQLYSQIVGNGAREVLANGHDLYKRKE 145
++ LY+ + N ARE++ D K KE
Sbjct: 84 NAIHLYASVFSNNAREIIRLHSDASKNKE 112
>M.Javanica_Scaff24261g089082 on AAA29775 TRAP (Invasion) [Plasmodium falciparum]
Length = 574
Score = 23.9 bits (50), Expect = 5.9, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 117 SSCQLYSQIVGNGAREVLANGHDLYKRKE 145
++ LY+ + N ARE++ D K KE
Sbjct: 84 NAIHLYASVFSNNAREIIRLHSDASKNKE 112
>M.Javanica_Scaff24261g089082 on AAW78159 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 23.9 bits (50), Expect = 5.9, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 117 SSCQLYSQIVGNGAREVLANGHDLYKRKE 145
++ LY+ + N ARE++ D K KE
Sbjct: 84 NAIHLYANVFSNNAREIIRLHSDASKNKE 112
>M.Javanica_Scaff24261g089082 on AAW78162 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 23.9 bits (50), Expect = 5.9, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 117 SSCQLYSQIVGNGAREVLANGHDLYKRKE 145
++ LY+ + N ARE++ D K KE
Sbjct: 84 NAIHLYASVFSNNAREIIRLHSDASKNKE 112
>M.Javanica_Scaff24261g089082 on AAW78166 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 23.9 bits (50), Expect = 6.2, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 117 SSCQLYSQIVGNGAREVLANGHDLYKRKE 145
++ LY+ + N ARE++ D K KE
Sbjct: 84 NAIHLYANVFSNNAREIIRLHSDASKNKE 112
>M.Javanica_Scaff24261g089082 on AAW78135 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 23.9 bits (50), Expect = 6.2, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 117 SSCQLYSQIVGNGAREVLANGHDLYKRKE 145
++ LY+ + N ARE++ D K KE
Sbjct: 84 NAIHLYANVFSNNAREIIRLHSDASKNKE 112
>M.Javanica_Scaff24261g089082 on AAW78160 TRAP (Invasion) [Plasmodium falciparum]
Length = 557
Score = 23.9 bits (50), Expect = 6.3, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 117 SSCQLYSQIVGNGAREVLANGHDLYKRKE 145
++ LY+ + N ARE++ D K KE
Sbjct: 84 NAIHLYANVFSNNAREIIRLHSDASKNKE 112
>M.Javanica_Scaff24261g089082 on AAW78177 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 23.9 bits (50), Expect = 6.5, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 117 SSCQLYSQIVGNGAREVLANGHDLYKRKE 145
++ LY+ + N ARE++ D K KE
Sbjct: 84 NAIHLYASVFSNNAREIIRLHSDASKNKE 112
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff20975g083654
(232 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAR88085 TbcatB (Cysteine proteases) [Trypanosoma brucei] 54 1e-09
P92132 CP2 (Cysteine protease) [Giardia duodenalis] 49 4e-08
AAS38514 CP65 (Cysteine protease) [Trichomonas vaginalis] 36 8e-04
CAA54436 CP2 (Cysteine protease) [Trichomonas vaginalis] 33 0.007
CAA54438 CP1 (Cysteine protease) [Trichomonas vaginalis] 32 0.019
ABC02174 Falstatin (Others) [Plasmodium falciparum] 32 0.019
XP_001347836 Falcipain 2 (Cysteine protease) [Plasmodium falc... 32 0.019
AAV98582 CP4 (Cysteine protease) [Trichomonas vaginalis] 32 0.019
CAJ20707 Toxopain-2 (Protease) [Toxoplasma gondii] 32 0.024
PF14_0553 Falcipain1 (Cysteine protease) [Plasmodium falciparum] 32 0.034
CAC67416 Brucipain (Cysteine proteases) [Trypanosoma brucei] 30 0.074
AAX77225 Falcipain 2' (Cysteine protease) [Plasmodium falcipa... 30 0.10
XP_001347833 Falcipain 3 (Cysteine protease) [Plasmodium falc... 30 0.11
CAA54437 CP3 (Cysteine protease) [Trichomonas vaginalis] 29 0.14
BAA96736 Cruzipain (Cysteine protease) [Trypanosoma cruzi] 24 1.9
BAA96737 Cruzipain (Cysteine protease) [Trypanosoma cruzi] 24 1.9
XP_650156 CP1 (Cysteine protease) [Entamoeba histolytica] 26 2.4
>M.Javanica_Scaff20975g083654 on AAR88085 TbcatB (Cysteine proteases) [Trypanosoma brucei]
Length = 340
Score = 53.9 bits (128), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 56/115 (48%), Gaps = 11/115 (9%)
Query: 84 LTAQNVAIINGRTNGIWEAKL-GFFSLLPDEDQKKLCGVFDIEIENIAGRDTSVVDTGER 142
L+ V +N GIW+AK G + + K+L GV I+ N A S++ +
Sbjct: 32 LSKAFVDRVNRLNRGIWKAKYDGVMQNITLREAKRLNGV--IKKNNNA----SIL---PK 82
Query: 143 SRRQASQANCNYETEFDVRDKWPKCSPFINQVQHQGLCGSCWAISTASVYTDRHC 197
R +A + FD + WP C P I Q+ Q CGSCWA++ AS +DR C
Sbjct: 83 RRFTEEEARAPLPSSFDSAEAWPNC-PTIPQIADQSACGSCWAVAAASAMSDRFC 136
>M.Javanica_Scaff20975g083654 on P92132 CP2 (Cysteine protease) [Giardia duodenalis]
Length = 255
Score = 48.9 bits (115), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
Query: 158 FDVRDKWPKCSPFINQVQHQGLCGSCWAISTASVYTDRHCIER-DKK 203
FD R+++P C P +V QG CGSCWA S+ + + DR C+ DKK
Sbjct: 79 FDFREEYPHCIP---EVVDQGGCGSCWAFSSVATFGDRRCVAGLDKK 122
>M.Javanica_Scaff20975g083654 on AAS38514 CP65 (Cysteine protease) [Trichomonas vaginalis]
Length = 206
Score = 35.8 bits (81), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 30/56 (53%)
Query: 171 INQVQHQGLCGSCWAISTASVYTDRHCIERDKKXKTRKKHIIYRITSYNVCYTKLL 226
+N +Q QG CGSCWA S ++ I + K +++++ +T+ + C L+
Sbjct: 33 VNPIQDQGQCGSCWAFSAIQAQESQYAITSGELQKLSEQNLVDCVTTCDGCEGGLM 88
>M.Javanica_Scaff20975g083654 on CAA54436 CP2 (Cysteine protease) [Trichomonas vaginalis]
Length = 255
Score = 33.5 bits (75), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Query: 159 DVRDKWPKCSPFINQVQHQGLCGSCWAISTASVYTDRHCIERDKKXKTRKKHIIYRITSY 218
D RDK +N+++ QG CGSCWA S R+ + +++I+ +TS
Sbjct: 104 DWRDK-----GIVNKIKDQGQCGSCWAFSAIQASESRYAQANKQLLDLAEQNIVDCVTS- 157
Query: 219 NVCY 222
CY
Sbjct: 158 --CY 159
>M.Javanica_Scaff20975g083654 on CAA54438 CP1 (Cysteine protease) [Trichomonas vaginalis]
Length = 255
Score = 32.0 bits (71), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Query: 142 RSRRQASQANCNYETEFDVRDKWPKCSPFINQVQHQGLCGSCWAIST 188
++ R+A ++N + D R K +N ++ QG CGSCWA S
Sbjct: 63 KAERKAVKSNAIANADCDWRKK-----GAVNPIKDQGQCGSCWAFSA 104
>M.Javanica_Scaff20975g083654 on ABC02174 Falstatin (Others) [Plasmodium falciparum]
Length = 492
Score = 32.3 bits (72), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 171 INQVQHQGLCGSCWAISTASVYTDRHCIER 200
+ V+ Q LCGSCWA S+ ++ I +
Sbjct: 281 VTPVKDQALCGSCWAFSSVGSVESQYAIRK 310
>M.Javanica_Scaff20975g083654 on XP_001347836 Falcipain 2 (Cysteine protease) [Plasmodium
falciparum]
Length = 492
Score = 32.3 bits (72), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 171 INQVQHQGLCGSCWAISTASVYTDRHCIER 200
+ V+ Q LCGSCWA S+ ++ I +
Sbjct: 281 VTPVKDQALCGSCWAFSSVGSVESQYAIRK 310
>M.Javanica_Scaff20975g083654 on AAV98582 CP4 (Cysteine protease) [Trichomonas vaginalis]
Length = 255
Score = 32.0 bits (71), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Query: 142 RSRRQASQANCNYETEFDVRDKWPKCSPFINQVQHQGLCGSCWAIST 188
++ R+A ++N + D R K +N ++ QG CGSCWA S
Sbjct: 76 KAERKAVKSNAIANADCDWRKKGA-----VNPIKDQGQCGSCWAFSA 117
>M.Javanica_Scaff20975g083654 on CAJ20707 Toxopain-2 (Protease) [Toxoplasma gondii]
Length = 255
Score = 32.0 bits (71), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 171 INQVQHQGLCGSCWAISTASVYTDRHCIERDK 202
+ V+ Q CGSCWA ST HC + K
Sbjct: 217 VTPVKDQRDCGSCWAFSTTGALEGAHCAKTGK 248
>M.Javanica_Scaff20975g083654 on PF14_0553 Falcipain1 (Cysteine protease) [Plasmodium falciparum]
Length = 569
Score = 31.6 bits (70), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
Query: 156 TEFDVRDKWPKCSPF-----INQVQHQGLCGSCWAISTA 189
E D+ K P+ + +++ + QGLCGSCWA ++
Sbjct: 325 NEKDIFSKVPEILDYREKGIVHEPKDQGLCGSCWAFASV 363
>M.Javanica_Scaff20975g083654 on CAC67416 Brucipain (Cysteine proteases) [Trypanosoma brucei]
Length = 450
Score = 30.4 bits (67), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 171 INQVQHQGLCGSCWAIST 188
+ V+ QG CGSCWA ST
Sbjct: 138 VTPVKDQGQCGSCWAFST 155
>M.Javanica_Scaff20975g083654 on AAX77225 Falcipain 2' (Cysteine protease) [Plasmodium
falciparum]
Length = 484
Score = 30.0 bits (66), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 171 INQVQHQGLCGSCWAISTASVYTDRHCIERDK 202
+ V+ Q CGSCWA S+ ++ I ++K
Sbjct: 273 VTPVKDQKNCGSCWAFSSIGSVESQYAIRKNK 304
>M.Javanica_Scaff20975g083654 on XP_001347833 Falcipain 3 (Cysteine protease) [Plasmodium
falciparum]
Length = 482
Score = 30.0 bits (66), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 171 INQVQHQGLCGSCWAISTASVYTDRHCIERDK 202
+ V+ Q CGSCWA S+ ++ I ++K
Sbjct: 271 VTPVKDQKNCGSCWAFSSIGSVESQYAIRKNK 302
>M.Javanica_Scaff20975g083654 on CAA54437 CP3 (Cysteine protease) [Trichomonas vaginalis]
Length = 255
Score = 29.3 bits (64), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 171 INQVQHQGLCGSCWAISTASV 191
+N ++ Q CGSCWA S V
Sbjct: 112 VNPIKDQAQCGSCWAFSVVQV 132
>M.Javanica_Scaff20975g083654 on BAA96736 Cruzipain (Cysteine protease) [Trypanosoma cruzi]
Length = 70
Score = 24.3 bits (51), Expect = 1.9, Method: Composition-based stats.
Identities = 8/10 (80%), Positives = 8/10 (80%)
Query: 178 GLCGSCWAIS 187
G CGSCWA S
Sbjct: 1 GQCGSCWAFS 10
>M.Javanica_Scaff20975g083654 on BAA96737 Cruzipain (Cysteine protease) [Trypanosoma cruzi]
Length = 70
Score = 24.3 bits (51), Expect = 1.9, Method: Composition-based stats.
Identities = 8/10 (80%), Positives = 8/10 (80%)
Query: 178 GLCGSCWAIS 187
G CGSCWA S
Sbjct: 1 GQCGSCWAFS 10
>M.Javanica_Scaff20975g083654 on XP_650156 CP1 (Cysteine protease) [Entamoeba histolytica]
Length = 315
Score = 25.8 bits (55), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 11/45 (24%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Query: 171 INQVQHQGLCGSCWAISTASVYTDRHCIERDKKXKT---RKKHII 212
+ ++ QG CGSC+ + + R IE+ +T ++H++
Sbjct: 106 VTPIRDQGNCGSCYTFGSIAALEGRLLIEKGGDSETLDLSEEHMV 150
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff21348g084308
(73 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAA83031 Hemolysin (Invasion) [Cryptosporidium parvum] 22 3.2
XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum] 22 6.1
>M.Javanica_Scaff21348g084308 on AAA83031 Hemolysin (Invasion) [Cryptosporidium parvum]
Length = 229
Score = 22.3 bits (46), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 29 DIQNFAEIISGIGQMIQNPAETVDVPSALIMGKWLDLFYF 68
+I EI +GI I+N E D+P + + ++ L YF
Sbjct: 179 NINTLPEIENGIENGIENGIENGDIP-HVDLEQYTQLSYF 217
>M.Javanica_Scaff21348g084308 on XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1711
Score = 21.9 bits (45), Expect = 6.1, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 6 LFYFILSLLILNINVKAIGENPWDIQNFAEIISGIGQMIQNPAET 50
L F L + L ++K +P I+ F EI+ + +Q+P +T
Sbjct: 672 LLEFYLENIFLE-DMKNANGDPKVIEKFKEILGKENEEVQDPLKT 715
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff16582g074900
(368 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349434 PfEMP1 (Establishment) [Plasmodium falciparum] 27 2.5
XP_652394 Igl2 (Adhesin) [Entamoeba histolytica] 25 7.8
>M.Javanica_Scaff16582g074900 on XP_001349434 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2109
Score = 26.9 bits (58), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Query: 280 FQLFYNQFFTGGNRFDEVKNHINDYLNNSFQ----YSSINYTRLDRLIKACLQDHPDQRP 335
F YN+ T G D+ K ND + FQ + ++N ++ I Q + RP
Sbjct: 218 FGNIYNELTTSGKNVDKAKARYNDPKGDFFQLREDWWALNREKVWSAITCNAQGNKYFRP 277
Query: 336 SMNAIVSFLKNEC 348
+ + S N+C
Sbjct: 278 TCSGGESIAHNKC 290
>M.Javanica_Scaff16582g074900 on XP_652394 Igl2 (Adhesin) [Entamoeba histolytica]
Length = 1105
Score = 25.0 bits (53), Expect = 7.8, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 26 GCVGSSTTLEGKCQC-EKYDLDQFNRKRKISSINLKVKENEQIGEES 71
GCVG ++ C+C +KY ++ SI K+ E+ E+
Sbjct: 476 GCVGKDRDVKNDCECNDKYIPKSVDKASDCVSIKTKLPSCERAANEN 522
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff19895g081676
(264 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001610721 variant erythrocyte surface antigen-1, alpha subun... 27 1.3
XP_810023 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.9
XP_001351321 PfEMP1 (Establishment) [Plasmodium falciparum] 25 5.8
XP_817382 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.4
XP_806556 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 7.5
XP_805438 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 9.2
>M.Javanica_Scaff19895g081676 on XP_001610721 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1331
Score = 26.9 bits (58), Expect = 1.3, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 53 GNKKFGKNNKNRNDQKEENKELDIQSKDGSVSG 85
GNK+ GKN K++N + E +K+ + D + G
Sbjct: 992 GNKEEGKNKKDQNKKCEHDKDPSKKEDDDYICG 1024
>M.Javanica_Scaff19895g081676 on XP_810023 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 804
Score = 25.0 bits (53), Expect = 4.9, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Query: 34 QPDSNENLSNLGINSGKSGGNKKFGKNNKNRNDQK-----EENKELDIQSKDGS 82
+P N + LG+ +G +GG K FG + + + E NKE+ K G+
Sbjct: 549 EPKGNTPIPLLGVRAGSNGGKKLFGLSYNGGDKWQLLCGDETNKEISSTWKRGT 602
>M.Javanica_Scaff19895g081676 on XP_001351321 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3467
Score = 25.0 bits (53), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 195 QLEAETDRSKSSIRKYKQNWADRQGKIISDLYKK 228
+ +A D+ K I K+++ W +GK + LYKK
Sbjct: 1060 KCKAACDKYKDEINKWREQWTKIKGKYKT-LYKK 1092
>M.Javanica_Scaff19895g081676 on XP_817382 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 836
Score = 24.6 bits (52), Expect = 6.4, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 34 QPDSNENLSNLGINSGKSGGNKKFG 58
+P N + LG+ +G +GG K FG
Sbjct: 587 EPKGNTPIPLLGVRAGSNGGKKLFG 611
>M.Javanica_Scaff19895g081676 on XP_806556 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 844
Score = 24.6 bits (52), Expect = 7.5, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 34 QPDSNENLSNLGINSGKSGGNKKFG 58
+P N + LG+ +G +GG K FG
Sbjct: 595 EPKGNTPIPLLGVRAGSNGGKKLFG 619
>M.Javanica_Scaff19895g081676 on XP_805438 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 360
Score = 24.3 bits (51), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 17/76 (22%)
Query: 13 YLLIVNAKINGKRSDENFNNIQPDSNENLSNLGINSGKSGGNKKFGKNNKNRNDQK---- 68
+ L+ I+G +P + + LG+ +G +GG K FG + N D+
Sbjct: 100 FTLVATVSIDG----------EPKEDTPIPLLGVRAGSNGGKKLFGL-SYNGGDKWQLLC 148
Query: 69 --EENKELDIQSKDGS 82
E NKE+ K G+
Sbjct: 149 GDETNKEISSTWKRGT 164
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff23472g087854
(209 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_812613 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.6
XP_813188 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.7
XP_843644 VSG (Establishment) [Trypanosoma brucei] 25 5.0
XP_001349438 PfEMP1 (Establishment) [Plasmodium falciparum] 24 9.6
>M.Javanica_Scaff23472g087854 on XP_812613 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1038
Score = 25.4 bits (54), Expect = 2.6, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 87 NADQADVDATDSRLSTASQKSDTVEA-----DAVKTRNDKFRPTRAKAHQQQQLLNELTS 141
+A+ DV +T + ++T +++S ++EA + + P+R+ A + S
Sbjct: 888 SAENDDVRSTGT-VTTGAEESLSLEAGEGNSERTMGSDSSLTPSRSDAEPTSAENTDNIS 946
Query: 142 EISKKDSSPETGKDEPESADSS 163
+ S E GK+ P++ D++
Sbjct: 947 RTEGTEVSSEDGKEAPQTVDTA 968
>M.Javanica_Scaff23472g087854 on XP_813188 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1002
Score = 25.0 bits (53), Expect = 3.7, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 13/96 (13%)
Query: 69 EGNRNNFHVAVQNA--YSRTNADQADVDATDSRLSTASQKSDTVEADAVKTRNDKFRPTR 126
+ N N HV V N Y+R D +++ R A+ +++ V A +N
Sbjct: 666 KSNSGNVHVTVCNVLLYNRLLKDN-ELNPLKKRNVAAAPEAE-VSAPKGAPQN------- 716
Query: 127 AKAHQQQQLLNELTSEISKKDSSPETGKDEPESADS 162
+H Q + T K+D SPE K+E SA S
Sbjct: 717 --SHLSQPSEKDATPSPQKQDLSPEKSKNEKHSAGS 750
>M.Javanica_Scaff23472g087854 on XP_843644 VSG (Establishment) [Trypanosoma brucei]
Length = 490
Score = 24.6 bits (52), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 12/113 (10%)
Query: 71 NRNNFHVAVQNAYSRTNADQADVDATDSRLSTASQKSDTVEADAVKTRNDKFRPTRAKAH 130
N NN AV NA Q ++ T+SR+ST + D + +A K R H
Sbjct: 30 NANN---AVTNACQEAELLQHLIEETESRISTVTTAEDGITEEAQKFFLGAARSAGTDRH 86
Query: 131 QQQQLLNELTSEISKKDSSPETGKDEPESADSSDLINKRFPIAAKERQARMEF 183
Q LN ++I+ + + K++ +A D++ RQA++E
Sbjct: 87 WQYLALNLAATQIATNNKA----KNKATAATLKDVLQTLL-----RRQAQVEL 130
>M.Javanica_Scaff23472g087854 on XP_001349438 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2265
Score = 23.9 bits (50), Expect = 9.6, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 133 QQLLNELTSEISKKDSSPET-GKDEPESADS 162
Q++ N++ S I K DS+P T G P S +
Sbjct: 1120 QKIQNKIKSVIEKSDSTPRTPGTHSPSSGTT 1150
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2499g023354
(50 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_845141 VSG (Establishment) [Trypanosoma brucei] 25 0.12
>M.Javanica_Scaff2499g023354 on XP_845141 VSG (Establishment) [Trypanosoma brucei]
Length = 486
Score = 25.4 bits (54), Expect = 0.12, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
Query: 3 FSFFQI-KIKHKKVMADQIRK 22
+F++I ++KHK+ MADQ+ K
Sbjct: 374 LAFYKILEVKHKQQMADQVAK 394
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff20378g082566
(449 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_808824 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 6.9
XP_001351517 PfEMP1 (Establishment) [Plasmodium falciparum] 26 7.3
XP_817149 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 8.2
>M.Javanica_Scaff20378g082566 on XP_808824 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 777
Score = 25.8 bits (55), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 260 YKKRFEKVCKFSITNEHIKLHYEGEGCTVELITDGRSAINFTTG 303
+K+ E+V K + H K G C+ + ITDG + F +G
Sbjct: 476 WKEVDERVSKLCPSKSHAKNPSTGNACSTDKITDG--LVGFLSG 517
>M.Javanica_Scaff20378g082566 on XP_001351517 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2193
Score = 25.8 bits (55), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 8/52 (15%)
Query: 67 YAVYKKRFGKVCKFSITSDNIKLHYEGEGCTVELITDGRSMINFTTGMEDSK 118
Y +K+ +G V KF L + T + I D + I+FT +ED K
Sbjct: 430 YEEFKRNYGDVNKF--------LQLLNKEATCKTIGDEKEKIDFTKNVEDHK 473
>M.Javanica_Scaff20378g082566 on XP_817149 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 779
Score = 25.4 bits (54), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Query: 68 AVYKKRFGKVCKFSITSDNIKLHYEGEGCTVELITDGRSMINFTTG 113
A +KK +V K TS K G GC+ TDG ++ F +G
Sbjct: 461 ATWKKVDKRVSKLCPTSSAAKNPSAGNGCSAGKTTDG--LVGFLSG 504
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1884g019059
(909 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff212g003488
(108 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff23155g087351
(53 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351319 PfEMP1 (Establishment) [Plasmodium falciparum] 25 0.29
>M.Javanica_Scaff23155g087351 on XP_001351319 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2646
Score = 24.6 bits (52), Expect = 0.29, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 7/31 (22%)
Query: 21 YENFNITTNGQESGQ-------TTVKYDENS 44
YE F TT G SG+ TVK DENS
Sbjct: 1593 YEKFFGTTPGTTSGKYKEKYEYNTVKLDENS 1623
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff20038g081927
(105 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAC72001 Hsp70 (Heat shock protein) [Toxoplasma gondii] 54 5e-11
AAC72002 Hsp70 (Heat shock protein) [Toxoplasma gondii] 54 5e-11
CAA87086 Hsp70 (Heat shock protein) [Eimeria tenella] 37 7e-05
XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum] 25 1.4
XP_812613 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 6.8
>M.Javanica_Scaff20038g081927 on AAC72001 Hsp70 (Heat shock protein) [Toxoplasma gondii]
Length = 255
Score = 53.9 bits (128), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 26/28 (92%)
Query: 47 IGIDLGTTYSCVGVYKNGRVEIIANDQG 74
+GIDLGTTYSCVGV+KN VEIIANDQG
Sbjct: 7 VGIDLGTTYSCVGVWKNDAVEIIANDQG 34
>M.Javanica_Scaff20038g081927 on AAC72002 Hsp70 (Heat shock protein) [Toxoplasma gondii]
Length = 255
Score = 53.9 bits (128), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 26/28 (92%)
Query: 47 IGIDLGTTYSCVGVYKNGRVEIIANDQG 74
+GIDLGTTYSCVGV+KN VEIIANDQG
Sbjct: 7 VGIDLGTTYSCVGVWKNDAVEIIANDQG 34
>M.Javanica_Scaff20038g081927 on CAA87086 Hsp70 (Heat shock protein) [Eimeria tenella]
Length = 255
Score = 37.0 bits (84), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 25/38 (65%)
Query: 44 GTIIGIDLGTTYSCVGVYKNGRVEIIANDQGLNKSWEI 81
G ++GIDLGTT SCV V + + +++ N +G+ + +
Sbjct: 57 GDVVGIDLGTTNSCVAVMEGSQPKVLENSEGMRTTPSV 94
>M.Javanica_Scaff20038g081927 on XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3954
Score = 24.6 bits (52), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Query: 39 KDKKYGTIIGIDLGTTYSCVG-VYKNG 64
KD +G IGID+GT + +G V+ NG
Sbjct: 1863 KDILFGKYIGIDMGTVKTNIGRVFNNG 1889
>M.Javanica_Scaff20038g081927 on XP_812613 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1038
Score = 22.7 bits (47), Expect = 6.8, Method: Composition-based stats.
Identities = 9/37 (24%), Positives = 20/37 (54%)
Query: 24 GRDEGAKNDSAKPKDKDKKYGTIIGIDLGTTYSCVGV 60
GR EG +++ +PK + + +++ + L C G+
Sbjct: 24 GRREGRESERQRPKMSRRVFNSVVLLFLVVMMMCCGI 60
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff18108g078082
(93 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_807743 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.67
XP_001349030 PfEMP1 (Establishment) [Plasmodium falciparum] 25 0.68
XP_001351877 PfEMP1 (Establishment) [Plasmodium falciparum] 25 0.75
XP_804800 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.86
XP_821088 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.92
XP_812697 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.92
XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum] 25 0.95
XP_001609041 variant erythrocyte surface antigen-1, alpha subun... 25 0.96
XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum] 24 1.3
XP_001609533 variant erythrocyte surface antigen-1, alpha subun... 24 1.3
XP_818295 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.4
XP_810391 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.0
XP_818399 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.4
XP_821148 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.3
P13399 TA4 (Others) [Eimeria tenella] 23 4.2
CAE52292 SAG1 (Others) [Eimeria tenella] 23 4.2
XP_817612 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.4
XP_954175 TashAT3 (Establishment) [Theileria annulata] 23 4.9
XP_819530 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 6.2
XP_802978 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 8.8
>M.Javanica_Scaff18108g078082 on XP_807743 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 931
Score = 25.4 bits (54), Expect = 0.67, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 37/94 (39%), Gaps = 25/94 (26%)
Query: 18 STQTCQPPTTPPICTCTWETSPGVTSTVQMTTA---------------GTTS-------T 55
S+ QPP+ P + G TST +TA GT+S
Sbjct: 744 SSPAGQPPSGPKLLNGNEGAGGGSTSTSAPSTATTSLGKEQSVIRLPLGTSSGGNKNVDV 803
Query: 56 VSPANGYPSVPPETEAPASTAGPIEPEKQPIDDP 89
SP++G P+V EA + G P+ P+D P
Sbjct: 804 ASPSDGDPTV--GAEAGGAVQGDTPPQ-TPVDTP 834
>M.Javanica_Scaff18108g078082 on XP_001349030 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 25.4 bits (54), Expect = 0.68, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Query: 55 TVSPANGYPSVPPETEAPASTAGPIEPEKQPI 86
TV P P P ET PA+ G PE+ P+
Sbjct: 1661 TVVPTE--PEEPGETCTPAAAGGGHNPEQTPV 1690
>M.Javanica_Scaff18108g078082 on XP_001351877 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2270
Score = 25.0 bits (53), Expect = 0.75, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 32/86 (37%), Gaps = 18/86 (20%)
Query: 16 GVSTQTCQPPTTPP---ICTCTWETSPG---------VTSTVQMTTAGTTSTVSP----- 58
G QTC+ P TPP E +P T Q T GT V+P
Sbjct: 1677 GKPGQTCENPITPPDDEDLVLEEEQNPENMRPGFCPPQTPAQQEETDGTCDAVAPGAAKK 1736
Query: 59 ANGYPSVPPETEAPASTAGPIEPEKQ 84
A +PP E P + GP + + +
Sbjct: 1737 AEEESGIPPAAE-PEADKGPEQADTE 1761
>M.Javanica_Scaff18108g078082 on XP_804800 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 940
Score = 25.0 bits (53), Expect = 0.86, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 21/60 (35%), Gaps = 8/60 (13%)
Query: 36 ETSPGVTSTV--------QMTTAGTTSTVSPANGYPSVPPETEAPASTAGPIEPEKQPID 87
ETSPG T TV T P + P P T A A P K+ +D
Sbjct: 802 ETSPGGTKTVDGGSSSNGDQTVEAEAGDTVPGDRPPQAPAGTPATADANTPTATGKRKVD 861
>M.Javanica_Scaff18108g078082 on XP_821088 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 910
Score = 24.6 bits (52), Expect = 0.92, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 17 VSTQTCQPPTTPPICTCTWETSPGVTSTVQMTTAG 51
VS+ + PP+ P I T +P + Q+T G
Sbjct: 752 VSSDSIVPPSPPVIATAQQTGTPSTPAGTQLTEQG 786
>M.Javanica_Scaff18108g078082 on XP_812697 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 911
Score = 24.6 bits (52), Expect = 0.92, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 17 VSTQTCQPPTTPPICTCTWETSPGVTSTVQMTTAG 51
VS+ + PP+ P I T +P + Q+T G
Sbjct: 753 VSSDSIVPPSPPVIATAQQTGTPSTPAGTQLTEQG 787
>M.Javanica_Scaff18108g078082 on XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2264
Score = 24.6 bits (52), Expect = 0.95, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 20/53 (37%), Gaps = 6/53 (11%)
Query: 32 TCTWETSPGVTSTVQMTTAGTTSTVSPANGYPSVPPETEAPASTAGPIEPEKQ 84
TCT E T+ T T ST P + P +T GP EP +
Sbjct: 1699 TCTSE------DTITKETVETDSTDGPKQEEERIAPSAGDDGATRGPQEPSPK 1745
>M.Javanica_Scaff18108g078082 on XP_001609041 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1318
Score = 24.6 bits (52), Expect = 0.96, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 18 STQTCQPPTTPPIC-TCTWETSPGVTSTVQ 46
ST+ +PP TP C TC T+ GV S +Q
Sbjct: 846 STKCGKPP-TPSFCQTCLQPTTTGVPSPLQ 874
>M.Javanica_Scaff18108g078082 on XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2858
Score = 24.3 bits (51), Expect = 1.3, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 63 PSVPPETEAPASTAGPIEP 81
PSVP ETE P++P
Sbjct: 2393 PSVPAETEKEKKKDSPLKP 2411
>M.Javanica_Scaff18108g078082 on XP_001609533 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1162
Score = 24.3 bits (51), Expect = 1.3, Method: Composition-based stats.
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 18 STQTCQPPTTPPIC-TCTWETSPGVTSTVQ 46
ST+ Q PT P IC TC T+ GV S +Q
Sbjct: 818 STKCGQKPT-PSICKTCLQPTTTGVPSPLQ 846
>M.Javanica_Scaff18108g078082 on XP_818295 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 922
Score = 24.3 bits (51), Expect = 1.4, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 30/76 (39%), Gaps = 19/76 (25%)
Query: 21 TCQPPTTPPI--CTCTWETSPGVTSTVQMTT-----------------AGTTSTVSPANG 61
T PP P+ T T+++ VT++V T A + + P++G
Sbjct: 690 TIPPPEREPVPALTTTFQSVDTVTTSVATETQATVAAPTPAAPQLTEQANSNGSSDPSDG 749
Query: 62 YPSVPPETEAPASTAG 77
PS P + TAG
Sbjct: 750 APSTPAVSNTTTPTAG 765
>M.Javanica_Scaff18108g078082 on XP_810391 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 885
Score = 23.9 bits (50), Expect = 2.0, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Query: 15 IGVSTQTCQPPTTPPICTCTWETSPGVTSTVQMTTAGTTSTV-SPANGYPSVPPETEAPA 73
+ S T PP P+ TS V S + T T TV SPA P +T A
Sbjct: 683 LNASKVTIPPPERKPVPAAA-ATSSSVESANERVTTNTQPTVPSPATAGPQQTDQTTLNA 741
Query: 74 ST 75
S+
Sbjct: 742 SS 743
>M.Javanica_Scaff18108g078082 on XP_818399 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 953
Score = 23.5 bits (49), Expect = 2.4, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 20/51 (39%), Gaps = 4/51 (7%)
Query: 40 GVTSTVQMTTAGTTSTVS----PANGYPSVPPETEAPASTAGPIEPEKQPI 86
G+T+ + T TV P PE E P+ G + EK P+
Sbjct: 736 GLTTKPSIPKTRGTKTVDGDTPPPEAIKQATPEAETPSGPGGQQQTEKDPL 786
>M.Javanica_Scaff18108g078082 on XP_821148 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 924
Score = 23.1 bits (48), Expect = 3.3, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Query: 16 GVSTQTCQPPTTPPICTCTWE-TSPGVTSTVQMTTAGTTSTV--SPANG 61
G + Q PP TP T T + +P T+ Q+ A TT S ANG
Sbjct: 814 GDAVQGDTPPKTPVDTTATADANAPTATNVAQVGPADTTEVAASSGANG 862
>M.Javanica_Scaff18108g078082 on P13399 TA4 (Others) [Eimeria tenella]
Length = 253
Score = 22.7 bits (47), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 25/76 (32%), Gaps = 22/76 (28%)
Query: 17 VSTQTCQPPTTPPICTCTWETSPGVTSTVQMTTAGTTSTV----SPANGYPSVPPETEAP 72
VS P T P+ +C P + AGTT V +PA
Sbjct: 153 VSFVALYNPKTSPVVSCVLLQCPNAGVGGRRLAAGTTDAVICLTNPA------------- 199
Query: 73 ASTAGPIEPEKQPIDD 88
P+E QP DD
Sbjct: 200 -----PLEARSQPFDD 210
>M.Javanica_Scaff18108g078082 on CAE52292 SAG1 (Others) [Eimeria tenella]
Length = 253
Score = 22.7 bits (47), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 25/76 (32%), Gaps = 22/76 (28%)
Query: 17 VSTQTCQPPTTPPICTCTWETSPGVTSTVQMTTAGTTSTV----SPANGYPSVPPETEAP 72
VS P T P+ +C P + AGTT V +PA
Sbjct: 153 VSFVALYNPKTSPVVSCVLLQCPNAGVGGRRLAAGTTDAVICLTNPA------------- 199
Query: 73 ASTAGPIEPEKQPIDD 88
P+E QP DD
Sbjct: 200 -----PLEARSQPFDD 210
>M.Javanica_Scaff18108g078082 on XP_817612 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 922
Score = 22.7 bits (47), Expect = 4.4, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Query: 44 TVQMTTAGTTSTVSPANGYPSVPPETEAPASTAG 77
T Q+T+ G++ P++G PS P + TAG
Sbjct: 736 TEQVTSNGSSD---PSDGAPSTPAVSNTTTPTAG 766
>M.Javanica_Scaff18108g078082 on XP_954175 TashAT3 (Establishment) [Theileria annulata]
Length = 994
Score = 22.7 bits (47), Expect = 4.9, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 52 TTSTVSPANGYPSVPPETEAPASTAGPIEPEKQPIDDPLI 91
T + VS G P P + P+ G P +Q DD ++
Sbjct: 532 TDAGVSSGAGAPPPPGDGSEPSDGPGDCPPPEQDQDDTVL 571
Score = 22.7 bits (47), Expect = 5.3, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 64 SVPPETEAPASTAGPIEPEKQPID 87
S+ +++AP S A P EPE +D
Sbjct: 871 SIKHKSKAPESVAEPTEPETITLD 894
>M.Javanica_Scaff18108g078082 on XP_819530 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 904
Score = 22.3 bits (46), Expect = 6.2, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 13/32 (40%)
Query: 50 AGTTSTVSPANGYPSVPPETEAPASTAGPIEP 81
A STVS A+ P PP T P P
Sbjct: 740 AAKPSTVSSASIIPPAPPVTPNGQKAGNPSTP 771
>M.Javanica_Scaff18108g078082 on XP_802978 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 340
Score = 21.9 bits (45), Expect = 8.8, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 17/39 (43%)
Query: 50 AGTTSTVSPANGYPSVPPETEAPASTAGPIEPEKQPIDD 88
A T+ V PAN + + APA T +P Q D
Sbjct: 196 AATSPPVEPANDTVTTNAQATAPAPTPAGPQPTDQATLD 234
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2051g020294
(99 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351437 PfEMP1 (Establishment) [Plasmodium falciparum] 23 3.6
XP_001351438 PfEMP1 (Establishment) [Plasmodium falciparum] 23 4.3
XP_844687 VSG (Establishment) [Trypanosoma brucei] 23 5.2
XP_844688 VSG (Establishment) [Trypanosoma brucei] 23 5.2
>M.Javanica_Scaff2051g020294 on XP_001351437 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2277
Score = 23.5 bits (49), Expect = 3.6, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 11 LFSLLSQFFPFVYSVIDNGILG--EPYVD-CGGNYIEVRFDTRNTFRGIVF 58
L S L + F +Y+ + NG G + Y D GGNY ++R D R V+
Sbjct: 217 LESKLKKIFGDIYNELTNGRNGVKDHYQDDNGGNYFQLREDWWTANRATVW 267
>M.Javanica_Scaff2051g020294 on XP_001351438 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2312
Score = 23.1 bits (48), Expect = 4.3, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 11 LFSLLSQFFPFVYSVIDNGILG--EPYVD-CGGNYIEVRFDTRNTFRGIVF 58
L S L + F +Y+ + NG G + Y D GGNY ++R D R V+
Sbjct: 211 LESKLKKIFGDIYNELTNGRNGVKDHYQDDNGGNYFQLREDWWTANRATVW 261
>M.Javanica_Scaff2051g020294 on XP_844687 VSG (Establishment) [Trypanosoma brucei]
Length = 508
Score = 22.7 bits (47), Expect = 5.2, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 50 RNTFRGIVFVEDHLNDPQCRSSPTVDDETNG 80
+N R ++++ED + + + T + E NG
Sbjct: 392 KNAQRALIYLEDQRPAEESKQTQTDESEING 422
>M.Javanica_Scaff2051g020294 on XP_844688 VSG (Establishment) [Trypanosoma brucei]
Length = 508
Score = 22.7 bits (47), Expect = 5.2, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 50 RNTFRGIVFVEDHLNDPQCRSSPTVDDETNG 80
+N R ++++ED + + + T + E NG
Sbjct: 392 KNAQRALIYLEDQRPAEESKQTQTDESEING 422
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff24345g089201
(115 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAM47175 Rh4 (Adhesin) [Plasmodium falciparum] 25 0.88
AAM47192 Rh4 (Adhesin) [Plasmodium falciparum] 25 0.88
AAM47174 Rh4 (Adhesin) [Plasmodium falciparum] 25 0.89
XP_819146 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.9
XP_001610720 variant erythrocyte surface antigen-1, beta subuni... 24 2.7
XP_001608664 variant erythrocyte surface antigen-1, beta subuni... 24 2.7
XP_001349035 PfEMP1 (Establishment) [Plasmodium falciparum] 24 3.2
XP_001350409 PfEMP1 (Establishment) [Plasmodium falciparum] 23 3.9
AAR36877 CP2 (Invasion) [Cryptosporidium parvum] 22 8.8
AAX07966 alpha-19 giardin (Others) [Giardia duodenalis] 22 9.2
AAK49521 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum] 22 9.8
>M.Javanica_Scaff24345g089201 on AAM47175 Rh4 (Adhesin) [Plasmodium falciparum]
Length = 1711
Score = 25.4 bits (54), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 7/56 (12%)
Query: 18 ILFTNACYCGKMSEEEKYCNSDWVAYVKSLRRGEVRDKEGKASEYEYTVKLLKTFK 73
I F N K+ E K + ++ ++ S + A EYEY +K TFK
Sbjct: 355 IYFINKHIVNKIQENFKLNQNKYIHFINS-------NNAVNAKEYEYIIKYYTTFK 403
>M.Javanica_Scaff24345g089201 on AAM47192 Rh4 (Adhesin) [Plasmodium falciparum]
Length = 1716
Score = 25.4 bits (54), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 6/56 (10%)
Query: 18 ILFTNACYCGKMSEEEKYCNSDWVAYVKSLRRGEVRDKEGKASEYEYTVKLLKTFK 73
I F N K+ E K + ++ ++ S + A EYEY +K TFK
Sbjct: 356 IYFINKHIVNKIQENFKLNQNKYIHFINS------NNAVNAAKEYEYIIKYYTTFK 405
>M.Javanica_Scaff24345g089201 on AAM47174 Rh4 (Adhesin) [Plasmodium falciparum]
Length = 1711
Score = 25.4 bits (54), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 6/56 (10%)
Query: 18 ILFTNACYCGKMSEEEKYCNSDWVAYVKSLRRGEVRDKEGKASEYEYTVKLLKTFK 73
I F N K+ E K + ++ ++ S + A EYEY +K TFK
Sbjct: 356 IYFINKHIVNKIQENFKLNQNKYIHFINS------NNAVNAAKEYEYIIKYYTTFK 405
>M.Javanica_Scaff24345g089201 on XP_819146 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 825
Score = 24.6 bits (52), Expect = 1.9, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 13 TNLWGILFTNACYCGKMSEEEKYCNSD 39
T+ WG+L G + EE++ C +D
Sbjct: 181 TDHWGLLLVKGQVSGAVEEEKRICWND 207
>M.Javanica_Scaff24345g089201 on XP_001610720 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1102
Score = 24.3 bits (51), Expect = 2.7, Method: Composition-based stats.
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 79 NQNNKIDCIYSATNSAACG 97
N+N+ + C+Y+ NSA G
Sbjct: 858 NKNDTLKCLYTCPNSAPTG 876
>M.Javanica_Scaff24345g089201 on XP_001608664 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1116
Score = 24.3 bits (51), Expect = 2.7, Method: Composition-based stats.
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 79 NQNNKIDCIYSATNSAACG 97
N+N+ + C+Y+ NSA G
Sbjct: 872 NKNDTLKCLYTCPNSAPTG 890
>M.Javanica_Scaff24345g089201 on XP_001349035 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2239
Score = 23.9 bits (50), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 10/16 (62%), Positives = 13/16 (81%)
Query: 71 TFKDNKTCNQNNKIDC 86
T K+ KTCN+N+K DC
Sbjct: 1500 TQKEGKTCNENSKNDC 1515
>M.Javanica_Scaff24345g089201 on XP_001350409 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2223
Score = 23.5 bits (49), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 6/58 (10%)
Query: 59 ASEYEYTVKLLKTFKDNKTCNQN--NKIDCIYSATNSAACGVELKDS----QEYLLFG 110
EY Y V ++ + D K + N + ID I + NS +++ D +E LFG
Sbjct: 1979 GEEYSYNVNMVNSMDDTKYVSNNVYSGIDLINDSLNSGNQPIDIYDEVLKRKENELFG 2036
>M.Javanica_Scaff24345g089201 on AAR36877 CP2 (Invasion) [Cryptosporidium parvum]
Length = 255
Score = 22.3 bits (46), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 10/43 (23%)
Query: 68 LLKTFKDNKTCNQNNKIDCIYSAT----------NSAACGVEL 100
LLK + N++ + N+K+D I A NS C EL
Sbjct: 165 LLKKYSQNRSGSPNSKVDAILLAELEQSSSCFSGNSVQCTSEL 207
>M.Javanica_Scaff24345g089201 on AAX07966 alpha-19 giardin (Others) [Giardia duodenalis]
Length = 255
Score = 22.3 bits (46), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 11/47 (23%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 46 SLRRGEVRDK-EGKASEYEYTVKLLKTFKDNKTCNQNNKIDCIYSAT 91
+LR +R+ +GKA++ E ++ T +++ C D +Y +
Sbjct: 109 TLRTELIRESLQGKATDIEQLTDVVLTLSESRACEIVQNYDLLYGGS 155
>M.Javanica_Scaff24345g089201 on AAK49521 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum]
Length = 1210
Score = 22.3 bits (46), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Query: 4 FILYFFVLLTNLWGILFTNACYCGKMSEEEKYCNSDWVAYVKSLRRGEVRDKEGKASEYE 63
F +YF + L L+ ++ N G+ + +SD ++ V S S+YE
Sbjct: 5 FNIYFLIPLIFLYNVIRINESIIGRTLYNRQDESSD-ISRVNSPELNNNHKTNIYDSDYE 63
Query: 64 -YTVKLLKTFKDNKTCNQNNKIDCIYSATNS 93
KL+ +F +NK+ + + I + T S
Sbjct: 64 DVNNKLINSFVENKSVKKKRSLSFINNKTKS 94
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff22099g085572
(95 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001612314 variant erythrocyte surface antigen-1, alpha subun... 25 0.80
XP_821084 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.9
XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum] 23 5.6
AAF14193 SBP3 (Others) [Babesia bovis] 22 9.3
>M.Javanica_Scaff22099g085572 on XP_001612314 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1308
Score = 25.0 bits (53), Expect = 0.80, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 7/50 (14%)
Query: 35 PFVYEWVYSKGGSISAEHGIGHVKRTFHHNLVNPKIREISSSIKKLFDPK 84
PF E Y K GS ++ I + K T H E S+ K+ D K
Sbjct: 1176 PFNLEGYYQKDGSKEGDYSIENTKTTKH-------CHEFLESLSKVLDDK 1218
>M.Javanica_Scaff22099g085572 on XP_821084 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 965
Score = 23.5 bits (49), Expect = 2.9, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 24 EYDQKIYDLLYPFVYEWVYSKGGSISAEHGIGHVKRTFHHNLV 66
E ++K+ +L Y +W+ GG + EHG K H ++
Sbjct: 619 EGEKKLMELSYDSEKKWILLCGGGQNREHGSTWEKEKTQHVVI 661
>M.Javanica_Scaff22099g085572 on XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3119
Score = 22.7 bits (47), Expect = 5.6, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 15/34 (44%)
Query: 1 MLYEVITFGHIGDGNVHINVSIPEYDQKIYDLLY 34
MLY I G + N + E D+ + D LY
Sbjct: 1071 MLYAKARITAINGGPGYYNTEVQEEDKPVVDFLY 1104
>M.Javanica_Scaff22099g085572 on AAF14193 SBP3 (Others) [Babesia bovis]
Length = 1089
Score = 21.9 bits (45), Expect = 9.3, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 37 VYEWVYSKGGSISAEHGIGHVKRTFHHNLVNPKIREISSSIKKLFDPKGILSPYKMIDF 95
++E Y+ +S + G + T H + + I+ + +F+P+ LS ++D+
Sbjct: 57 IHEETYNAKSFMSKD---GKIMSTVFHAPSDALFKAINHGVTTIFNPETFLSYKVIVDY 112
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1893g019121
(93 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609449 variant erythrocyte surface antigen-1, beta subuni... 22 8.9
>M.Javanica_Scaff1893g019121 on XP_001609449 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 776
Score = 21.9 bits (45), Expect = 8.9, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 34 DGNGGDLDDLLTEFRAKG-SRMRFGKRSSSSSSPRFSSSSAD 74
D GG + +LLT+ ++KG S + F K + + S + SS D
Sbjct: 294 DKKGGFVQELLTD-KSKGVSWLEFTKGADNKSVAEYYSSIYD 334
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff17727g077301
(51 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349030 PfEMP1 (Establishment) [Plasmodium falciparum] 24 0.31
XP_829776 VSG (Establishment) [Trypanosoma brucei] 22 2.6
XP_001218755 VSG (Establishment) [Trypanosoma brucei] 22 3.5
>M.Javanica_Scaff17727g077301 on XP_001349030 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 24.3 bits (51), Expect = 0.31, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Query: 3 KANTDLLINMTFA-----DPTFADDFCRSTFADADTCRYDTCRSDICRSDFCRY 51
++N DL N+T + + T DD C S + R D C+ D +D R+
Sbjct: 37 RSNGDLKGNLTISTIFDTETTGTDDPCSSDYTTRFDARGDPCKKDGTGNDVERF 90
>M.Javanica_Scaff17727g077301 on XP_829776 VSG (Establishment) [Trypanosoma brucei]
Length = 471
Score = 21.9 bits (45), Expect = 2.6, Method: Composition-based stats.
Identities = 9/13 (69%), Positives = 10/13 (76%)
Query: 9 LINMTFADPTFAD 21
LI +T ADPTF D
Sbjct: 231 LIQLTAADPTFLD 243
>M.Javanica_Scaff17727g077301 on XP_001218755 VSG (Establishment) [Trypanosoma brucei]
Length = 526
Score = 21.6 bits (44), Expect = 3.5, Method: Composition-based stats.
Identities = 9/12 (75%), Positives = 9/12 (75%)
Query: 10 INMTFADPTFAD 21
INMT AD TF D
Sbjct: 63 INMTVADSTFMD 74
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff22015g085429
(113 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Q4U925 Casein kinase II alpha (Establishment) [Theileria annu... 29 0.054
CAA05261 PfSUB1 (Proteases) [Plasmodium falciparum] 24 2.1
>M.Javanica_Scaff22015g085429 on Q4U925 Casein kinase II alpha (Establishment) [Theileria
annulata]
Length = 348
Score = 28.9 bits (63), Expect = 0.054, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 29 NVEKGRWM-FCEEFRENGISDDAKDFISRLLIVEKEKRILPDECLRH 74
N K W F ++ +S + D + R+L+ + KRI P E + H
Sbjct: 291 NHSKKPWTKFVHHENQHLVSPEVMDLLDRMLVYDHTKRITPLEAMEH 337
>M.Javanica_Scaff22015g085429 on CAA05261 PfSUB1 (Proteases) [Plasmodium falciparum]
Length = 689
Score = 24.3 bits (51), Expect = 2.1, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Query: 43 ENG-ISDDAKDFISRLLIVEKEKRIL 67
ENG I DDAK +S L +EK + ++
Sbjct: 31 ENGKIQDDAKKIVSELRFLEKVEDVI 56
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff24068g088765
(267 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum] 29 0.34
AAL38222 PfNBP1 (Adhesin) [Plasmodium falciparum] 25 4.4
AAL38218 PfNBP1 (Adhesin) [Plasmodium falciparum] 25 4.5
AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum] 24 9.7
AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum] 24 9.7
AAL38220 PfNBP1 (Adhesin) [Plasmodium falciparum] 24 10.0
>M.Javanica_Scaff24068g088765 on XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum]
Length = 3130
Score = 28.9 bits (63), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 182 LKCNFTKFNVWFKNADVFVKVIDLKDLFSSETFRQMKNIILGEIMDEKTFEECAFYYNSL 241
++ NF K+ F N + + + D K+ + + +KN+ + KT E+ Y+N L
Sbjct: 2072 IQYNFEKYKEIFDNVEEYKTLDDTKNAYIVKKAEILKNVDIN-----KTKEDLDIYFNDL 2126
Query: 242 EETKKDLNLA 251
+E +K L L+
Sbjct: 2127 DELEKSLTLS 2136
>M.Javanica_Scaff24068g088765 on AAL38222 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2976
Score = 25.4 bits (54), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 12/94 (12%)
Query: 152 AEKMSENIEKYKENCNSLRT--------FAFDSHTPCYLKCNFTKFNVWFKNAD----VF 199
AE ENIEK K+ N+L ++ + + K + N D VF
Sbjct: 1939 AENQKENIEKIKQEINTLSDVFKKPFFFIQLNTDSSQHEKDINNNVETYKNNIDEIYNVF 1998
Query: 200 VKVIDLKDLFSSETFRQMKNIILGEIMDEKTFEE 233
++ +L +SSE F N I + + EK+ +E
Sbjct: 1999 IQSYNLIQKYSSEIFSSTLNYIQTKEIKEKSIKE 2032
>M.Javanica_Scaff24068g088765 on AAL38218 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2977
Score = 25.4 bits (54), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 12/94 (12%)
Query: 152 AEKMSENIEKYKENCNSLRT--------FAFDSHTPCYLKCNFTKFNVWFKNAD----VF 199
AE ENIEK K+ N+L ++ + + K + N D VF
Sbjct: 1936 AENQKENIEKIKQEINTLSDVFKKPFFFIQLNTDSSQHEKDINNNVETYKNNIDEIYNVF 1995
Query: 200 VKVIDLKDLFSSETFRQMKNIILGEIMDEKTFEE 233
++ +L +SSE F N I + + EK+ +E
Sbjct: 1996 IQSYNLIQKYSSEIFSSTLNYIQTKEIKEKSIKE 2029
>M.Javanica_Scaff24068g088765 on AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2965
Score = 24.3 bits (51), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 12/94 (12%)
Query: 152 AEKMSENIEKYKENCNSLRT--------FAFDSHTPCYLKCNFTKFNVWFKNAD----VF 199
AE ENIEK K+ N+L ++ + + K + N D VF
Sbjct: 1932 AEIQKENIEKIKQEINTLSDVFKKPFFFIQLNTDSSQHEKDINNNVETYKNNIDEIYNVF 1991
Query: 200 VKVIDLKDLFSSETFRQMKNIILGEIMDEKTFEE 233
++ +L +SSE F N I + + EK+ +E
Sbjct: 1992 IQSYNLIQKYSSEIFSSTLNYIQTKEIKEKSIKE 2025
>M.Javanica_Scaff24068g088765 on AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2969
Score = 24.3 bits (51), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 12/94 (12%)
Query: 152 AEKMSENIEKYKENCNSLRT--------FAFDSHTPCYLKCNFTKFNVWFKNAD----VF 199
AE ENIEK K+ N+L ++ + + K + N D VF
Sbjct: 1928 AEIQKENIEKIKQEINTLSDVFKKPFFFIQLNTDSSQHEKDINNNVETYKNNIDEIYNVF 1987
Query: 200 VKVIDLKDLFSSETFRQMKNIILGEIMDEKTFEE 233
++ +L +SSE F N I + + EK+ +E
Sbjct: 1988 IQSYNLIQKYSSEIFSSTLNYIQTKEIKEKSIKE 2021
>M.Javanica_Scaff24068g088765 on AAL38220 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2957
Score = 24.3 bits (51), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 12/94 (12%)
Query: 152 AEKMSENIEKYKENCNSLRT--------FAFDSHTPCYLKCNFTKFNVWFKNAD----VF 199
AE ENIEK K+ N+L ++ + + K + N D VF
Sbjct: 1926 AEIQKENIEKIKQEINTLSDVFKKPFFFIQLNTDSSQHEKDINNNVETYKNNIDEIYNVF 1985
Query: 200 VKVIDLKDLFSSETFRQMKNIILGEIMDEKTFEE 233
++ +L +SSE F N I + + EK+ +E
Sbjct: 1986 IQSYNLIQKYSSEIFSSTLNYIQTKEIKEKSIKE 2019
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff22489g086243
(69 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_807798 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.29
XP_817994 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.52
XP_818193 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.1
XP_808824 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.5
XP_815156 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 3.6
XP_821293 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 3.6
XP_817865 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 3.6
XP_820027 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 3.6
XP_820017 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 3.7
>M.Javanica_Scaff22489g086243 on XP_807798 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 875
Score = 25.4 bits (54), Expect = 0.29, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 32/56 (57%), Gaps = 6/56 (10%)
Query: 12 EKILNLHIPVIVANFQNIYSHSKA------RSKLPKRRLKVLQMSEIKAKERQTTK 61
EK+ +L +PV+V N+++ ++A +S ++L+ ++ ++KE TTK
Sbjct: 88 EKVSSLRVPVLVEMNSNVFAVAEAQCTEAGKSGFTGIASELLEWTDKESKELDTTK 143
>M.Javanica_Scaff22489g086243 on XP_817994 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 954
Score = 24.6 bits (52), Expect = 0.52, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 2 YFPISSRTKIEKILNLHIPVIVANFQNIYSHSKARSKLPKRRL------KVLQMSEIKAK 55
YF + EK+++L +P +V ++++ ++A K ++ ++L +S+ ++K
Sbjct: 80 YFVWRDKKSEEKVISLRVPSLVEMDGDVFAVAEAPCKDGSEKVFTGIASELLALSDEESK 139
Query: 56 ERQTTK 61
E T K
Sbjct: 140 ELDTNK 145
>M.Javanica_Scaff22489g086243 on XP_818193 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 838
Score = 23.9 bits (50), Expect = 1.1, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 12 EKILNLHIPVIVANFQNIYSHSKARSKLPKRRL-----KVLQMSEIKAKERQTTK 61
E + +LH+PV+V +++ ++A+ K ++L+ ++ ++KE TTK
Sbjct: 148 ETVSSLHVPVLVEMDGGVFAVAEAQLKEGGSNFTGIASELLEWTDKESKELDTTK 202
>M.Javanica_Scaff22489g086243 on XP_808824 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 777
Score = 23.5 bits (49), Expect = 1.5, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 12 EKILNLHIPVIVANFQNIYSHSKARSKLPKRRL------KVLQMSEIKAKERQTTK 61
E + +LH+PV+V +++ ++A+ K ++L+ ++ ++KE TTK
Sbjct: 93 ETVSSLHVPVLVEMDGGVFAVAEAQLKEGGSNFFTGIASELLEWTDKESKELDTTK 148
>M.Javanica_Scaff22489g086243 on XP_815156 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 966
Score = 22.3 bits (46), Expect = 3.6, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 21/35 (60%)
Query: 2 YFPISSRTKIEKILNLHIPVIVANFQNIYSHSKAR 36
YF K+E +++L +P +V ++++ ++A+
Sbjct: 78 YFDWRDVEKVETVISLRVPSLVGMNGDVFAVAEAQ 112
>M.Javanica_Scaff22489g086243 on XP_821293 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 786
Score = 22.3 bits (46), Expect = 3.6, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 3 FPISSRTKIEKILNLHIPVIVANFQNIYSHSKARSKLPKRRL-----KVLQMSEIKAKER 57
F + + E + +LH+PV+V +++ ++A+ K ++L+ ++ +++E
Sbjct: 81 FAWRDKKEGETVDSLHVPVLVEMDGGVFAVAEAQLKEGGSNFTGIASELLEWTDKESREL 140
Query: 58 QTTK 61
TTK
Sbjct: 141 DTTK 144
>M.Javanica_Scaff22489g086243 on XP_817865 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 786
Score = 22.3 bits (46), Expect = 3.6, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 3 FPISSRTKIEKILNLHIPVIVANFQNIYSHSKARSKLPKRRL-----KVLQMSEIKAKER 57
F + + E + +LH+PV+V +++ ++A+ K ++L+ ++ +++E
Sbjct: 81 FAWRDKKEGETVDSLHVPVLVEMDGGVFAVAEAQLKEGGSNFTGIASELLEWTDKESREL 140
Query: 58 QTTK 61
TTK
Sbjct: 141 DTTK 144
>M.Javanica_Scaff22489g086243 on XP_820027 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 377
Score = 22.3 bits (46), Expect = 3.6, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 12 EKILNLHIPVIVANFQNIYSHSKARSKLPKRRL-----KVLQMSEIKAKERQTTK 61
E + +LH+PV+V +++ ++A+ K ++L+ ++ +++E TTK
Sbjct: 52 ETVDSLHVPVLVEMDGGVFAVAEAQLKEGGSNFTGIASELLEWTDKESRELDTTK 106
>M.Javanica_Scaff22489g086243 on XP_820017 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 779
Score = 22.3 bits (46), Expect = 3.7, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 12 EKILNLHIPVIVANFQNIYSHSKARSKLPKRRL-----KVLQMSEIKAKERQTTK 61
E + +LH+PV+V +++ ++A+ K ++L+ ++ +++E TTK
Sbjct: 90 ETVDSLHVPVLVEMDGGVFAVAEAQLKEGGSNFTGIASELLEWTDKESRELDTTK 144
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2241g021619
(251 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609041 variant erythrocyte surface antigen-1, alpha subun... 27 1.1
XP_819719 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.2
XP_807804 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.2
XP_001610196 variant erythrocyte surface antigen-1, alpha subun... 27 1.8
XP_001609101 variant erythrocyte surface antigen-1, alpha subun... 26 2.1
XP_001609667 variant erythrocyte surface antigen-1, alpha subun... 26 2.5
CAB37326 PfSUB2 (Proteases) [Plasmodium falciparum] 25 3.5
XP_813578 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.4
XP_803417 VSG (Establishment) [Trypanosoma brucei] 25 4.9
AAA83031 Hemolysin (Invasion) [Cryptosporidium parvum] 25 5.6
XP_001608665 variant erythrocyte surface antigen-1, alpha subun... 25 5.7
XP_001349207 EBA-175 (Adhesin) [Plasmodium falciparum] 25 7.5
>M.Javanica_Scaff2241g021619 on XP_001609041 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1318
Score = 27.3 bits (59), Expect = 1.1, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Query: 100 SNKREELIELSKQFVMVNVEDDDEPEEEEYAPDGRYIPRLFILNKEGHPLAVDNAKNYPK 159
S +E++E SK + V ++ +E P +F +K HP+ VD +
Sbjct: 485 SQAYKEMLEYSKGRLTVVLKTPNEATSTNEQPQ-----LMFYQDKRPHPITVDEYNLFAH 539
Query: 160 NKQYFPQVPDVIIAMKLGLKKLE 182
+ P V+I ++ GLK +
Sbjct: 540 FQAVTQYCPLVLIGIQGGLKSTD 562
>M.Javanica_Scaff2241g021619 on XP_819719 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1053
Score = 26.9 bits (58), Expect = 1.2, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 195 KEVKKD--EKVKEKELKEKTKKEENKKPASGGC---PHAAGKAAKKAEEEAK 241
KEVK+D + K+ ++++ +EENKK A+ HA ++ E+ K
Sbjct: 773 KEVKQDATSSQQRKDAQDRSSEEENKKTAASATYSDSHAVADTKRREEQMEK 824
>M.Javanica_Scaff2241g021619 on XP_807804 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1054
Score = 26.9 bits (58), Expect = 1.2, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 195 KEVKKD--EKVKEKELKEKTKKEENKKPASGGC---PHAAGKAAKKAEEEAK 241
KEVK+D + K+ ++++ +EENKK A+ HA ++ E+ K
Sbjct: 774 KEVKQDATSSQQRKDAQDRSSEEENKKTAASATYSDSHAVADTKRREEQMEK 825
>M.Javanica_Scaff2241g021619 on XP_001610196 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1330
Score = 26.6 bits (57), Expect = 1.8, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 8/94 (8%)
Query: 153 NAKNYPKNKQYFPQVPDVIIAMKLGLKKLEGQEEEE----DVVEEEKEVKKDEKVKE--- 205
N + K K + V++ + + LEG+E+E V + + D+ VK
Sbjct: 683 NGSDAKKIKDVLEAIGQVVVQLGNAQEALEGKEKEAIEGVKVALGTAKTELDKAVKNGLN 742
Query: 206 -KELKEKTKKEENKKPASGGCPHAAGKAAKKAEE 238
KEL+E KK E GG G+ K E
Sbjct: 743 GKELEEAKKKLEELTTKGGGNNGILGEVVDKLGE 776
>M.Javanica_Scaff2241g021619 on XP_001609101 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1359
Score = 26.2 bits (56), Expect = 2.1, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 161 KQYFPQVPDVIIAMKLGLKKLEGQEEEEDVVEEEKEVKKDEKVKEKELKEKTKKEENKKP 220
K +V DV++ + L +EG +E+ +E E+KK + +++L+E K +E +
Sbjct: 712 KGVLEKVLDVVLGVVEKL--VEGVKEKVKALE---EIKKTLEAAKEKLEEAKKTQEALEA 766
Query: 221 ASGGCPHAAG--KAAKKA 236
A G A G AKKA
Sbjct: 767 AKGELEGAKGALTTAKKA 784
>M.Javanica_Scaff2241g021619 on XP_001609667 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1303
Score = 26.2 bits (56), Expect = 2.5, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 179 KKLEGQEEEEDVVEEEKEVKKDEKVKEKELKEKTKKEENKKPASGGCPHAAGKAAKKA 236
KKL QE ++ + E KE++ E + E +LKE + GG H + A
Sbjct: 695 KKL--QEAKKGLEEARKELETGEDLDEDDLKEAKEALGELTNGGGGALHTLANGSNTA 750
>M.Javanica_Scaff2241g021619 on CAB37326 PfSUB2 (Proteases) [Plasmodium falciparum]
Length = 1342
Score = 25.4 bits (54), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 207 ELKEKTKKEENKKPASGGCPHAAGKAAKKAEEEAKKK 243
EL +K KEEN G GK +KK +E ++K
Sbjct: 391 ELNQKVNKEENTNLYDGTGTLYYGKKSKKEKENTQQK 427
>M.Javanica_Scaff2241g021619 on XP_813578 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 893
Score = 25.4 bits (54), Expect = 4.4, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 171 IIAMKLGLKKLEGQEEEEDVVEEEKEVKKDEKVKEKELKEKTKKEENKKPAS 222
I + L L+ +E EE + K+ KKD +V EK++ + KK + +P +
Sbjct: 121 IASQLLNLEDKTNKEPEEIL----KDAKKDTQVLEKDVSQGKKKVDVSRPTT 168
>M.Javanica_Scaff2241g021619 on XP_803417 VSG (Establishment) [Trypanosoma brucei]
Length = 540
Score = 25.0 bits (53), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 48/115 (41%), Gaps = 24/115 (20%)
Query: 120 DDDEPEEEEYA-PDGRYIPRLFILNKEGHPLAVDNAKNYPKNKQYFPQVPDVIIAMKLGL 178
DDD + YA PDG+ IP+ + L Q+ DV M+L
Sbjct: 344 DDDGMRKVLYAHPDGQPIPKAALGTDADTTLG---------------QITDVGELMRLYF 388
Query: 179 --------KKLEGQEEEEDVVEEEKEVKKDEKVKEKELKEKTKKEENKKPASGGC 225
K LE +++ ++V + ++K KE K K KKEE +K A GC
Sbjct: 389 YYSDLNKQKLLEAEKKLQEVETKTATKSAEDKEKECNTKGKDKKEECEKLAKEGC 443
>M.Javanica_Scaff2241g021619 on AAA83031 Hemolysin (Invasion) [Cryptosporidium parvum]
Length = 229
Score = 24.6 bits (52), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 139 LFILNKEGHPLAVDNAKNYPK 159
LF + P+AVD KNYP
Sbjct: 122 LFQFERRDSPVAVDTLKNYPS 142
>M.Javanica_Scaff2241g021619 on XP_001608665 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1326
Score = 25.0 bits (53), Expect = 5.7, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 14/95 (14%)
Query: 144 KEGHPLAVDNAKNYP-KNKQYFPQVPDVIIAMKLGLKKLEGQEEEEDVVEEEKEVKKDEK 202
KEG V K+ K K ++ +V++ + + LEG++ E EK
Sbjct: 681 KEGLGKVVSKGKSEEEKAKALLEKIGEVVVQLGNAQEALEGKKTE-----------AIEK 729
Query: 203 VKEKELKEKTKKEENKKPASGGCPHAAGKAAKKAE 237
VKE+ + KTK E+ K G +A KK E
Sbjct: 730 VKEELTEAKTKLEDAVK--KDGLTGKLAEATKKLE 762
>M.Javanica_Scaff2241g021619 on XP_001349207 EBA-175 (Adhesin) [Plasmodium falciparum]
Length = 1462
Score = 24.6 bits (52), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 6/30 (20%)
Query: 3 FFFSSFILLYFLFYFVIAKVEEKRSIKEKQ 32
+FF+SF +LYF AK + IKE +
Sbjct: 8 YFFASFFVLYF------AKARNEYDIKENE 31
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1933g019422
(283 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_814930 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.28
XP_806519 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.49
XP_001349219 PfEMP1 (Establishment) [Plasmodium falciparum] 25 8.9
>M.Javanica_Scaff1933g019422 on XP_814930 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 938
Score = 29.3 bits (64), Expect = 0.28, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 34/94 (36%), Gaps = 7/94 (7%)
Query: 29 GQNNFNPSQYRDDTGTSGTETTAHVVTGTGSIPSNTEGYTQEVNPSGLETFQTLSGLNQA 88
G F P+ T T+ ET +GT SI +TEG + S E +T G +
Sbjct: 824 GDGAFTPAVSNATTHTAEEETVNQSASGTFSITDSTEG-----DVSSDENGETTGGADGQ 878
Query: 89 LGSHPFSPQHQQMNVGQEENQGSDSYSAKCEWDG 122
PQ + N S +WDG
Sbjct: 879 --EEDIQPQDGEANAAALGFALKSSLGTSSQWDG 910
>M.Javanica_Scaff1933g019422 on XP_806519 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 912
Score = 28.5 bits (62), Expect = 0.49, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 7/83 (8%)
Query: 35 PSQYRDDTGTSGTETTAHVVTGTGSIPSNTEGYTQEVNPSGLETFQTLSGLNQALGSHPF 94
P + +DT T+ T+ T +T G+ P+ PSG S + S P
Sbjct: 708 PVEPANDTVTTSTQATVPSLTPAGTQPTEQATVNASSVPSG-------STPSTTAESRPA 760
Query: 95 SPQHQQMNVGQEENQGSDSYSAK 117
P+ +N + G+ S A+
Sbjct: 761 EPEQATLNASSVPSGGAPSTPAE 783
>M.Javanica_Scaff1933g019422 on XP_001349219 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2595
Score = 24.6 bits (52), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 43/116 (37%), Gaps = 4/116 (3%)
Query: 44 TSGTETTAHVVTGTGS-IPSNTEGYTQEVNPSGLETF---QTLSGLNQALGSHPFSPQHQ 99
T GT ++ T T S P T V + +ETF N S Q
Sbjct: 997 TDGTSVSSEPTTATSSPSPKGDSLLTAFVESAAVETFFLWHKYKAENTKTQSESLLLPPQ 1056
Query: 100 QMNVGQEENQGSDSYSAKCEWDGCGRVFYNQNEFVEHVKDHTEDQKGENRNCLWSG 155
+ V +N + S K D ++FY ++ + + ++D+K N + G
Sbjct: 1057 PVPVVDNDNPQNQLLSGKIPPDFLRQMFYTLGDYRDILFSGSKDEKSSTYNDILKG 1112
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff197g003294
(87 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_810023 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.28
XP_817382 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.3
XP_806556 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.5
XP_810562 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.7
XP_805438 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.9
>M.Javanica_Scaff197g003294 on XP_810023 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 804
Score = 26.2 bits (56), Expect = 0.28, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
Query: 28 VGQTTYPLPQHFG---HATTQHGGELQLFPTN 56
VGQTT PQH G +AT + Q P N
Sbjct: 725 VGQTTLQQPQHEGKGQNATAEESATTQEVPAN 756
>M.Javanica_Scaff197g003294 on XP_817382 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 836
Score = 24.3 bits (51), Expect = 1.3, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 3/30 (10%)
Query: 28 VGQTTYPLPQHFG---HATTQHGGELQLFP 54
VGQTT PQH G +AT + Q P
Sbjct: 757 VGQTTLQQPQHEGKGQNATAEESATTQEVP 786
>M.Javanica_Scaff197g003294 on XP_806556 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 844
Score = 23.9 bits (50), Expect = 1.5, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 3/30 (10%)
Query: 28 VGQTTYPLPQHFG---HATTQHGGELQLFP 54
VGQTT PQH G +AT + Q P
Sbjct: 765 VGQTTLQQPQHEGKGQNATAEESATTQEVP 794
>M.Javanica_Scaff197g003294 on XP_810562 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 874
Score = 23.5 bits (49), Expect = 2.7, Method: Composition-based stats.
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 29 GQTTYPLPQHFGHATTQH 46
G+TT L FG TTQH
Sbjct: 626 GKTTTELSSTFGTDTTQH 643
>M.Javanica_Scaff197g003294 on XP_805438 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 360
Score = 23.1 bits (48), Expect = 2.9, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 3/30 (10%)
Query: 28 VGQTTYPLPQHFG---HATTQHGGELQLFP 54
VGQTT PQH G +AT + Q P
Sbjct: 281 VGQTTLQQPQHEGKGQNATAEESATTQEVP 310
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff20378g082567
(88 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_845636 VSG (Establishment) [Trypanosoma brucei] 24 1.4
>M.Javanica_Scaff20378g082567 on XP_845636 VSG (Establishment) [Trypanosoma brucei]
Length = 490
Score = 23.9 bits (50), Expect = 1.4, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 52 SACPGTANTRSAAMDTSSRAQSVVDFLAKGPVL 84
SA P T N + A +DT R+ + +AKG +L
Sbjct: 219 SATPATHNKKIACVDTGDRSNKLGS-VAKGIIL 250
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff20481g082751
(252 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_812314 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.60
XP_001611147 variant erythrocyte surface antigen-1, alpha subun... 27 1.1
XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum] 27 1.6
XP_814441 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.9
XP_844694 VSG (Establishment) [Trypanosoma brucei] 26 3.1
XP_811678 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.5
XP_811897 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.7
XP_812313 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.0
XP_814625 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.9
XP_806299 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 5.2
XP_803409 VSG (Establishment) [Trypanosoma brucei] 25 5.3
XP_819530 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.1
XP_805336 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.7
XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum] 25 6.8
XP_812615 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 8.2
XP_813500 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 8.6
ABQ59247 RCC1 (Establishment) [Toxoplasma gondii] 24 9.2
>M.Javanica_Scaff20481g082751 on XP_812314 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 923
Score = 28.1 bits (61), Expect = 0.60, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 113 EQQESECLSVGESIKDGGSSLGSSSSPFNSSMNDASSL---ETLSSSKSMGASSSP 165
+ +E + S+G S DG S+ SS+ +S A+ L E+ SK++G +SSP
Sbjct: 743 QGKEEQRQSLGSSRADGVSASTVSSARTSSGEGSATQLVSEESSDGSKNVGGASSP 798
Score = 25.8 bits (55), Expect = 2.6, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 10/90 (11%)
Query: 106 ISKLKPSEQQESECLSVGESIKDGGSSLGSSSSPFN---------SSMNDASSLETLSSS 156
+S + S + S V E DG ++G +SSP + S++ S ETL +
Sbjct: 765 VSSARTSSGEGSATQLVSEESSDGSKNVGGASSPGSEAAVETGDRSTVQGDGSSETLVGT 824
Query: 157 KSMGASSSPLPGSFPSPSPALNSPSSSISS 186
+ + +P + A+N P +S SS
Sbjct: 825 PATADAYAPNAEAMGHDGTAVN-PGASASS 853
>M.Javanica_Scaff20481g082751 on XP_001611147 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1304
Score = 27.3 bits (59), Expect = 1.1, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 16/86 (18%)
Query: 97 EYF-----GGIKEIISKL-------KPSEQQESECLSVGESIKDGGSSLGSSSSPFNSSM 144
EYF G++E + K+ KP Q + VG++++D GS+S+P++S+
Sbjct: 993 EYFCGWCASGLREEVKKIEWIPFDTKPGGQYMDK---VGKALRDIKGEKGSTSTPYSSAA 1049
Query: 145 NDASSLETLSSSKSMGASSSPLPGSF 170
+S+ +LS SPL G
Sbjct: 1050 PQSSN-TSLSRLTKNCQYLSPLTGEL 1074
>M.Javanica_Scaff20481g082751 on XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2264
Score = 26.6 bits (57), Expect = 1.6, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 23/38 (60%)
Query: 197 LQNSPVAHHAKRLVRNKTFSNFLSKATCLLQLDEESVK 234
+ +PV+ KR RN+ + + SK +L++D ++V+
Sbjct: 414 INGAPVSRRQKRDARNENYDGYESKFYKILKIDYQNVE 451
>M.Javanica_Scaff20481g082751 on XP_814441 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 931
Score = 26.6 bits (57), Expect = 1.9, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 5/65 (7%)
Query: 112 SEQQESECLSVGESIKDGGSSLGSSSSPFNSSMNDASSLETLSSSKSMGASSSPLPGSFP 171
S ++ES V E DG ++G SSP + +ET G SS P P
Sbjct: 781 SGEEESATQLVSEESSDGSKNVGGGSSP-----GSDAPVETGEGGTVQGDGSSQTPVGTP 835
Query: 172 SPSPA 176
+ + A
Sbjct: 836 ATADA 840
>M.Javanica_Scaff20481g082751 on XP_844694 VSG (Establishment) [Trypanosoma brucei]
Length = 491
Score = 25.8 bits (55), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 104 EIISKLKPSEQQESECLSVGESIKDGGSSLGSSSSPFN 141
E + K +E++E EC + G+ +DG L FN
Sbjct: 397 EAKTATKSAEEKEKECNTKGKDKQDGCEKLKDQGCVFN 434
>M.Javanica_Scaff20481g082751 on XP_811678 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 926
Score = 25.4 bits (54), Expect = 3.5, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Query: 122 VGESIKDGGSSLGSSSSPFNSSMNDASSLETLSSSKSMGASSSPLPGSFPSPSPALNSPS 181
V E DG ++G SSP +++ET S G SS P P+ + A + +
Sbjct: 784 VSEESSDGTQTVGGGSSP-----GSDAAVETGDRSTVQGDGSSQTPVGTPATADAYDPNA 838
Query: 182 SSI 184
++
Sbjct: 839 EAM 841
>M.Javanica_Scaff20481g082751 on XP_811897 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 879
Score = 25.4 bits (54), Expect = 3.7, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Query: 137 SSPFNSSMNDASSLETLSSS------KSMGASSSPLPGSFPSPSPALNSPSSSISSF 187
+SP + A + L S +SMG+S G+ PS P +++PS+ S
Sbjct: 728 TSPVTPNAQKAGTSSALDGSHLTERGQSMGSSGVNGGGASPSAVPTVSTPSAGKDSL 784
Score = 24.6 bits (52), Expect = 7.1, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 28/59 (47%)
Query: 121 SVGESIKDGGSSLGSSSSPFNSSMNDASSLETLSSSKSMGASSSPLPGSFPSPSPALNS 179
S+G S +GG + S+ ++ SL+ ++S KS + + GSF P + +
Sbjct: 755 SMGSSGVNGGGASPSAVPTVSTPSAGKDSLQQVASGKSSDGTQTVDGGSFSDGEPTVET 813
>M.Javanica_Scaff20481g082751 on XP_812313 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 920
Score = 25.4 bits (54), Expect = 4.0, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Query: 122 VGESIKDGGSSLGSSSSPFNSSMNDASSLETLSSSKSMGASSSPLPGSFPSPSPA 176
V E DG ++G +SSP +++ET S G SSP P+ + A
Sbjct: 778 VSEESSDGSKNVGGASSP-----GSDAAVETGDRSTVQGDGSSPTLVGTPATADA 827
>M.Javanica_Scaff20481g082751 on XP_814625 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 941
Score = 25.0 bits (53), Expect = 4.9, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query: 101 GIKEIISKLKPSEQQESECLSVGESIKDGGSSLGSSSSPFNSSMNDASSLETLSSSKSMG 160
G + ++SK E + L + + G SL +S + +S ++ ++ +S +
Sbjct: 739 GTQPVVSKQVTLETETPSSLGGQQRTEQG--SLRTSENARSSVLSTSAVSSVTNSPAAKE 796
Query: 161 ASSSPLPGSFPSPSPALNSPSSS 183
+ + + G FP +P ++ SSS
Sbjct: 797 SENQSVSGKFPEGNPNVDVDSSS 819
>M.Javanica_Scaff20481g082751 on XP_806299 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1047
Score = 25.0 bits (53), Expect = 5.2, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 37/88 (42%), Gaps = 7/88 (7%)
Query: 114 QQESECLSVGESIKDGGSSLGSSSSPFNSSMNDASSLETLSSSKSMGASSSPLPGSFPSP 173
QQ +E + + ++ G+ + + D SS ++MG+ SSP P +
Sbjct: 894 QQSTELSAENDDVRSTGTGTTGAEQSLSLEAGDGSS------ERTMGSGSSPTPSKSGAE 947
Query: 174 SPALNSPSSSISSFFSSPFSPRSLQNSP 201
+ + + + +IS FS ++ P
Sbjct: 948 TKSAEN-TDNISWSEGGEFSSEDVEEVP 974
>M.Javanica_Scaff20481g082751 on XP_803409 VSG (Establishment) [Trypanosoma brucei]
Length = 501
Score = 25.0 bits (53), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 39/95 (41%), Gaps = 13/95 (13%)
Query: 93 QYNGEYFGGIKEIISKLKPSEQQESECLSVGESIKDGGSSLG------------SSSSPF 140
QY+GE GGI + LK + CL+ DG ++ S+ + F
Sbjct: 132 QYSGELAGGIVSAVHFLKHASDGAHYCLNSNGKKGDGRPAVDTTGCATLTATEVSTETGF 191
Query: 141 N-SSMNDASSLETLSSSKSMGASSSPLPGSFPSPS 174
N +ND ++ + + + GA + G F + S
Sbjct: 192 NKGDINDDGFVKLTALTTTDGAGQTGTCGVFETAS 226
>M.Javanica_Scaff20481g082751 on XP_819530 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 904
Score = 24.6 bits (52), Expect = 6.1, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 32/77 (41%), Gaps = 8/77 (10%)
Query: 110 KPSEQQESECLSVGESIKDGGSSLGSSSSPFNSSMNDASSLETLSSSKSMGASSSPLPGS 169
KPS + + + G G+ S+P + + + +SMG+S + G+
Sbjct: 742 KPSTVSSASIIPPAPPVTPNGQKAGNPSTPAGTKLTE--------QGQSMGSSGAGSDGA 793
Query: 170 FPSPSPALNSPSSSISS 186
S +++PS+ S
Sbjct: 794 SASAVSTVSTPSAEEES 810
>M.Javanica_Scaff20481g082751 on XP_805336 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 931
Score = 24.6 bits (52), Expect = 6.7, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 5/73 (6%)
Query: 112 SEQQESECLSVGESIKDGGSSLGSSSSPFNSSMNDASSLETLSSSKSMGASSSPLPGSFP 171
S ++ S V E DG ++G SSP + +ET S G SS P P
Sbjct: 780 SGEEGSATQLVSEESSDGSKNVGGGSSP-----GSDAPVETGDRSTVQGDGSSQTPVGTP 834
Query: 172 SPSPALNSPSSSI 184
+ + A + + ++
Sbjct: 835 AIADAYDPNAEAM 847
>M.Javanica_Scaff20481g082751 on XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2994
Score = 24.6 bits (52), Expect = 6.8, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 19 EGVLQKLKENAPLLVPNAKDDVVYLFMFPRTTRIANHCVPC 59
+ L+KLKE P N KD + T R A +C PC
Sbjct: 1590 DSFLKKLKE-GPCCNKNTKDSKIDFKDTEETFRNAEYCDPC 1629
>M.Javanica_Scaff20481g082751 on XP_812615 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1116
Score = 24.3 bits (51), Expect = 8.2, Method: Composition-based stats.
Identities = 45/192 (23%), Positives = 79/192 (41%), Gaps = 28/192 (14%)
Query: 73 FHRISNQFMLGSKENEVPFIQYNGEYFGGIKEIISKLKPSEQQESECLSVGESIKDGGSS 132
FHRIS+ ++ G +++ GG + + + +E+ L + K S
Sbjct: 734 FHRISHFYIGGDSKDQ--------SATGGHVTVTNVMLYNERLLGSDLRKLNAGKVTIPS 785
Query: 133 LGSSSSPFNSSMNDASSLETLSSSKSMGASSSPLPGS---------FPSPSPALNSPSSS 183
LG P + + S+ + S S+ A+S LPG P PA +PSS+
Sbjct: 786 LGVEKQPTGQAASTDISVASESKSEETTAASHELPGDDNDEQVEGIVNDPVPA--APSST 843
Query: 184 I---SSFFSSPFSPRSLQNSPVAHHAKRLVRNKTFSN-FLSKATCLLQLDE----ESVKQ 235
+ +S S + +NS ++A+ L KT L++A +Q D + ++
Sbjct: 844 LFAGASISESAIAAEIAENSLPENNAQ-LSEGKTVQQAALNEAKESMQRDSDVQPQDLQS 902
Query: 236 RKLETVKGIEDS 247
KL +E S
Sbjct: 903 EKLTVFSDVEKS 914
>M.Javanica_Scaff20481g082751 on XP_813500 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 898
Score = 24.3 bits (51), Expect = 8.6, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 38/84 (45%), Gaps = 12/84 (14%)
Query: 109 LKPSEQQESECLSVGESIKDGGSSLGSSSSPFNSSMNDASSLET------LSSSKSMGAS 162
L+ E + SE L+V S+ ++SP +++ +L T +SMG+S
Sbjct: 728 LQQLEDKSSEPLTVSSD------SVNPNTSPVTAAVQQTGTLSTPDGKHLTEQGQSMGSS 781
Query: 163 SSPLPGSFPSPSPALNSPSSSISS 186
++ G+ + + +PS+ S
Sbjct: 782 NAGSGGASTTAVSTITTPSAGEES 805
>M.Javanica_Scaff20481g082751 on ABQ59247 RCC1 (Establishment) [Toxoplasma gondii]
Length = 255
Score = 23.9 bits (50), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 165 PLPGSFPSPSPALNSPSSSISSF 187
P PG+ P+ SPA + PS+S S F
Sbjct: 122 PKPGTLPTSSPASSRPSNSASPF 144
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff24535g089507
(310 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_814930 Trans-sialidase (Invasion) [Trypanosoma cruzi] 41 5e-05
XP_814486 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.21
XP_812069 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.26
XP_803096 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.54
XP_001609667 variant erythrocyte surface antigen-1, alpha subun... 27 1.6
XP_814927 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.9
XP_821438 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 3.2
XP_954179 TashAT2 (Establishment) [Theileria annulata] 25 5.9
XP_818396 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.6
XP_814919 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 8.1
XP_806844 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 8.2
>M.Javanica_Scaff24535g089507 on XP_814930 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 938
Score = 41.2 bits (95), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 250 KKAKKTKEKAKKDKKKPKKEKEDGEDEEGKEDG-KEDKEEGGGEENKEEEGGGDEKEEDG 308
K K+ ++K +K + +KE G+ E+ KE G EDK+ G E+K+E G ++K+E G
Sbjct: 756 KMIKEVEDKKEKGSGDSEDKKESGDSEDKKESGDSEDKKGSGDSEDKKESGDSEDKKESG 815
Score = 40.0 bits (92), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 12/94 (12%)
Query: 28 GEDEGDG------------DNPEGEGDGKDDKGEDDKEDKGEDEGKTDDADGEDDEKKKP 75
G DEGD + P G+ K K +DK++KG + + G+ ++KK+
Sbjct: 728 GGDEGDSGSDATLTDVFLYNRPLSVGELKMIKEVEDKKEKGSGDSEDKKESGDSEDKKES 787
Query: 76 KKGGKKAGKKESKKKKGRDDDEDEDEEGKNKKKQ 109
K G +S+ KK D ED+ E G ++ K+
Sbjct: 788 GDSEDKKGSGDSEDKKESGDSEDKKESGDSEDKK 821
Score = 39.3 bits (90), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 250 KKAKKTKEKAKKDKKKPKKEKEDGEDEEGKEDGKEDKEEGGGEENKEEEGGGDEKEEDG 308
K + +++K + + KKE D ED++G D EDK+E G E+K+E G ++K+ G
Sbjct: 767 KGSGDSEDKKESGDSEDKKESGDSEDKKGSGD-SEDKKESGDSEDKKESGDSEDKKGSG 824
Score = 38.1 bits (87), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 40 EGDGKDDKGEDDKEDK---GEDEGKTDDADGEDDEKKKPKKGGKKAGKKESKKKKGRDDD 96
E + K +KG D EDK G+ E K + D ED + + K++G E KK+ G +D
Sbjct: 760 EVEDKKEKGSGDSEDKKESGDSEDKKESGDSEDKKGSGDSEDKKESGDSEDKKESGDSED 819
Query: 97 EDEDEEG 103
+ +G
Sbjct: 820 KKGSGDG 826
Score = 36.6 bits (83), Expect = 0.002, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 33/71 (46%)
Query: 222 LSFCNQCPKNKKKGDNDEDEGDEMKDGGKKAKKTKEKAKKDKKKPKKEKEDGEDEEGKED 281
L + K+KG D ++ E D K + + KK + +KE G+ E+ KE
Sbjct: 755 LKMIKEVEDKKEKGSGDSEDKKESGDSEDKKESGDSEDKKGSGDSEDKKESGDSEDKKES 814
Query: 282 GKEDKEEGGGE 292
G + ++G G+
Sbjct: 815 GDSEDKKGSGD 825
Score = 36.2 bits (82), Expect = 0.002, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 26 GQGEDE---GDGDNPEGEGDGKDDKGEDDKEDKGEDEGKTDDADGEDDEKKKPKKGG 79
G ED+ GD ++ + GD +D KG D EDK E D + D E KK G
Sbjct: 770 GDSEDKKESGDSEDKKESGDSEDKKGSGDSEDKKESGDSEDKKESGDSEDKKGSGDG 826
Score = 33.9 bits (76), Expect = 0.011, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 12/64 (18%)
Query: 32 GDGDNPEGEGDGKDDKGEDDKEDK---GEDEGKTDDADGEDDEKKKPKKGGKKAGKKESK 88
GD ++ + GD +D K D EDK G+ E K + D ED K++G E K
Sbjct: 770 GDSEDKKESGDSEDKKESGDSEDKKGSGDSEDKKESGDSEDK---------KESGDSEDK 820
Query: 89 KKKG 92
K G
Sbjct: 821 KGSG 824
Score = 32.0 bits (71), Expect = 0.041, Method: Composition-based stats.
Identities = 34/145 (23%), Positives = 57/145 (39%), Gaps = 31/145 (21%)
Query: 194 DARPNDCQLWGKEICVNKLYRLMVITNCLSFCNQCPKNKKKGDNDEDEGDEMKDGGKKAK 253
DA D L+ + + V +L + + + + ++KK+ + ED+ + KK
Sbjct: 737 DATLTDVFLYNRPLSVGELKMIKEVEDKKEKGSGDSEDKKESGDSEDKKESGDSEDKKGS 796
Query: 254 -KTKEKAKKDKKKPKKEKEDGEDEEGKEDGK----------------------------E 284
+++K + + KKE D ED++G DG
Sbjct: 797 GDSEDKKESGDSEDKKESGDSEDKKGSGDGAFTPAVSNATTHTAEEETVNQSASGTFSIT 856
Query: 285 DKEEG--GGEENKEEEGGGDEKEED 307
D EG +EN E GG D +EED
Sbjct: 857 DSTEGDVSSDENGETTGGADGQEED 881
Score = 26.2 bits (56), Expect = 3.1, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 86 ESKKKKGRDDDEDEDEEGKNKKKQK 110
E KK+KG D ED+ E G ++ K++
Sbjct: 762 EDKKEKGSGDSEDKKESGDSEDKKE 786
>M.Javanica_Scaff24535g089507 on XP_814486 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 948
Score = 30.0 bits (66), Expect = 0.21, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 7/75 (9%)
Query: 236 DNDEDEGDEMKDGGKKAKKTKEKAK-KDKKKPKKEKEDGEDEEGKEDGKEDKEEGG--GE 292
D+ + G E+ D + + T+ D PK + +E K EGG +
Sbjct: 821 DDAQTVGKEVADNKQGDQPTQASVGVSDAANPKSHTAESRGQEEPAV----KTEGGVSSD 876
Query: 293 ENKEEEGGGDEKEED 307
EN E GG D +EED
Sbjct: 877 ENGETTGGADGQEED 891
>M.Javanica_Scaff24535g089507 on XP_812069 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 948
Score = 29.6 bits (65), Expect = 0.26, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
Query: 236 DNDEDEGDEMKDGGKKAKKTKEKAK-KDKKKPKKEKEDGEDEEGKEDGKEDKEEG-GGEE 293
D+ + G E+ D + + T+ D PK + G+E+ + E G +E
Sbjct: 821 DDAQTVGKEVADNKQGDQPTQVSVGVSDAANPKSHTAE---SRGQEEPAVETEGGVSSDE 877
Query: 294 NKEEEGGGDEKEED 307
N E GG D +EED
Sbjct: 878 NGETTGGADGQEED 891
>M.Javanica_Scaff24535g089507 on XP_803096 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 753
Score = 28.5 bits (62), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 31 EGDGDNPEGEGDGKDDKGEDDKEDK 55
GDG++ +G GDG+D KG D EDK
Sbjct: 701 SGDGEDKKGSGDGEDKKGSGDGEDK 725
Score = 27.7 bits (60), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 264 KKPKKEKE--DGEDEEGKEDGKEDKEEGGGEENKEEEGGGDEKE 305
+KPK+EK DGED++G DG EDK+ G E+K+ G G +E
Sbjct: 693 RKPKEEKGSGDGEDKKGSGDG-EDKKGSGDGEDKKRSGDGSMRE 735
>M.Javanica_Scaff24535g089507 on XP_001609667 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1303
Score = 26.9 bits (58), Expect = 1.6, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 9/61 (14%)
Query: 241 EGDEMKDGGKKAKKTKEKAKKDKKKPKKEKEDGEDEEGKEDGKEDKEEGGGEENKEEEGG 300
+G+E+K KK ++AKK ++ +KE E GED + ++D KE KE G N GG
Sbjct: 686 KGEEIKGVQKKL----QEAKKGLEEARKELETGEDLD-EDDLKEAKEALGELTN----GG 736
Query: 301 G 301
G
Sbjct: 737 G 737
Score = 24.6 bits (52), Expect = 8.5, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 269 EKEDGEDEEGKEDGKEDKEEGGGEENKEEEGGGDEKEED 307
E+ GE+ +G + ++ ++G E KE E G D E+D
Sbjct: 683 ERRKGEEIKGVQKKLQEAKKGLEEARKELETGEDLDEDD 721
>M.Javanica_Scaff24535g089507 on XP_814927 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 759
Score = 26.9 bits (58), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 267 KKEKEDGEDEEGKEDG-KEDKEEGGGEENKEEEGGGDEKE 305
KKEK G+ E+ KE G EDK+E G E+K+ G G +E
Sbjct: 700 KKEKGSGDSEDKKESGDSEDKKESGDSEDKKGSGDGSMRE 739
>M.Javanica_Scaff24535g089507 on XP_821438 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 957
Score = 26.2 bits (56), Expect = 3.2, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 30 DEGDGDNPEGEGDGKDDK--GEDDKEDKGEDEGKTDDADGEDDE 71
D D + P EG+G+D + GE+ T++A+G+++E
Sbjct: 862 DTADANTPTTEGEGQDGPTVNPEAGASSGENGEPTEEANGQEEE 905
>M.Javanica_Scaff24535g089507 on XP_954179 TashAT2 (Establishment) [Theileria annulata]
Length = 1161
Score = 25.4 bits (54), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 29/55 (52%)
Query: 250 KKAKKTKEKAKKDKKKPKKEKEDGEDEEGKEDGKEDKEEGGGEENKEEEGGGDEK 304
+K K E+ K+ + +P+K+K + E + +E + +E E++ + G EK
Sbjct: 457 RKHKPEPEQPKRKRGRPRKQKPEPESDHSEESTQPHPQEQETEDSIKALGPSPEK 511
>M.Javanica_Scaff24535g089507 on XP_818396 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1044
Score = 25.0 bits (53), Expect = 6.6, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 32/84 (38%), Gaps = 8/84 (9%)
Query: 28 GEDEGDGDNPEGEGDGKDDKGEDDKEDKGEDEGKTDDADGEDDEKK----KPKKGGKKAG 83
G G+ + G D KG+ GED + AD + + K + G+ +G
Sbjct: 833 GSSAGEDSDSSGAADTDSAKGKATGGSAGEDSDSSGAADTDSAKGKATGSSAGEDGESSG 892
Query: 84 KKESKKKKGR----DDDEDEDEEG 103
++ KG+ ED D G
Sbjct: 893 AADTDSAKGKATGGSAGEDSDSSG 916
>M.Javanica_Scaff24535g089507 on XP_814919 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 854
Score = 24.6 bits (52), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 14/75 (18%)
Query: 32 GDGDNPEGEGDGKDDKGEDDKEDK---GEDEGKTDDADGEDDEKKKPKKGGKKAGKKESK 88
G GD+ +G G +D KG EDK G+ EGK DG+D K G +S+
Sbjct: 767 GSGDDKKGSGGSEDKKGIGGAEDKKGSGDGEGKKGIRDGDD-----------KKGSGDSE 815
Query: 89 KKKGRDDDEDEDEEG 103
KKG ED+ G
Sbjct: 816 DKKGIGGAEDKKGSG 830
>M.Javanica_Scaff24535g089507 on XP_806844 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 740
Score = 24.6 bits (52), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Query: 250 KKAKKTKEKAKKDKKKPKKEK--EDGEDEEGKEDGK 283
+ T+ A KD+K PK EK DGED++G DG
Sbjct: 682 RPLNSTEMTAIKDRK-PKDEKGSSDGEDKKGSSDGS 716
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff20855g083434
(361 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAA29462 ABRA (Others) [Plasmodium falciparum] 28 1.1
XP_001609167 variant erythrocyte surface antigen-1, alpha subun... 27 2.1
ACB87908 Rh5 (Adhesin) [Plasmodium falciparum] 27 2.4
AAM45253 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum] 26 4.3
AAM45250 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum] 26 4.4
AAL23761 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum] 26 4.4
CAD98301 Subtilase (Others) [Cryptosporidium parvum] 25 5.0
AAM45255 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum] 25 7.9
AAK49521 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum] 25 8.1
XP_001610721 variant erythrocyte surface antigen-1, alpha subun... 25 9.6
>M.Javanica_Scaff20855g083434 on AAA29462 ABRA (Others) [Plasmodium falciparum]
Length = 743
Score = 27.7 bits (60), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
Query: 1 MKKMKLISVLFFLIFNSILWSLINSVKNNKNQ 32
M MK+ VLF L+ I W++I+ KN+KNQ
Sbjct: 1 MMNMKI--VLFSLLLFVIRWNIISCNKNDKNQ 30
>M.Javanica_Scaff20855g083434 on XP_001609167 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1317
Score = 26.9 bits (58), Expect = 2.1, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Query: 92 NEYNKDYYQQHKKERQDYNRNYVQNNKEKLQQHK 125
N +N + YQQ KK+ DY+ + N K+ Q H+
Sbjct: 1183 NPFNLEGYQQEKKDEGDYS---IDNTKKTRQCHQ 1213
>M.Javanica_Scaff20855g083434 on ACB87908 Rh5 (Adhesin) [Plasmodium falciparum]
Length = 526
Score = 26.6 bits (57), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 13/86 (15%)
Query: 45 LNKNLNDGAESSVAPQ----IEKYRETLKTN--TKITKKHKIENNEEEKRLKKNEY-NKD 97
LN N+NDG + P I+KY + N + +K+ ++NNE+ K + +Y N +
Sbjct: 87 LNTNVNDGLKYLFIPSHNSFIKKYSVFNQINDGMLLNEKNDVKNNEDYKNV---DYKNVN 143
Query: 98 YYQQHKKERQDYNRNYVQNNKEKLQQ 123
+ Q H KE +YN + N+ + LQ+
Sbjct: 144 FLQYHFKELSNYN---IANSIDILQE 166
>M.Javanica_Scaff20855g083434 on AAM45253 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum]
Length = 616
Score = 25.8 bits (55), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 197 FIREET-MGNNEDK-KKLAEKEYNKNYKQKNKEKIKEYKRNYYQKNK 241
FI ++ G N D+ K K+++ YK+KN EK+ K+ +++KNK
Sbjct: 101 FIGDDMDFGGNTDRVKGYINKKFSDYYKEKNVEKLNNIKKEWWEKNK 147
>M.Javanica_Scaff20855g083434 on AAM45250 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum]
Length = 616
Score = 25.8 bits (55), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 197 FIREET-MGNNEDK-KKLAEKEYNKNYKQKNKEKIKEYKRNYYQKNK 241
FI ++ G N D+ K K+++ YK+KN EK+ K+ +++KNK
Sbjct: 101 FIGDDMDFGGNTDRVKGYINKKFSDYYKEKNVEKLNNIKKEWWEKNK 147
>M.Javanica_Scaff20855g083434 on AAL23761 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum]
Length = 616
Score = 25.8 bits (55), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 197 FIREET-MGNNEDK-KKLAEKEYNKNYKQKNKEKIKEYKRNYYQKNK 241
FI ++ G N D+ K K+++ YK+KN EK+ K+ +++KNK
Sbjct: 101 FIGDDMDFGGNTDRVKGYINKKFSDYYKEKNVEKLNNIKKEWWEKNK 147
>M.Javanica_Scaff20855g083434 on CAD98301 Subtilase (Others) [Cryptosporidium parvum]
Length = 255
Score = 25.4 bits (54), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 18/121 (14%)
Query: 1 MKKMKLISVL-FFLIFNS--ILWSLINSVKNNKNQKELTRVEETSKDLNKNLNDGAESSV 57
MKK+ + +L + L+F ++ ++ N+ + + VE S DL + + A+ S
Sbjct: 1 MKKVNIFKLLPYLLVFFQKRVICNIFNT-----SSISINVVEGRSSDLELVIKNPADQSA 55
Query: 58 APQIEKYRETLKTNTKITKKHKIENNEEEKRLKKNEYNK--------DYYQQHKKERQDY 109
P+++ + +K E+ E+E L E+++ DYY Q K Q++
Sbjct: 56 TPEVQVVEKVFSPYIMKQQKPPEEDYEQEHIL--GEFSEMGNMDDEDDYYYQEKDSNQEF 113
Query: 110 N 110
N
Sbjct: 114 N 114
>M.Javanica_Scaff20855g083434 on AAM45255 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum]
Length = 616
Score = 25.0 bits (53), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 197 FIREET-MGNNEDK-KKLAEKEYNKNYKQKNKEKIKEYKRNYYQKNK 241
FI ++ G N D+ K ++++ YK+KN EK+ K+ +++KNK
Sbjct: 101 FIGDDMDFGGNTDRVKGYINRKFSDYYKEKNVEKLNNIKKEWWEKNK 147
>M.Javanica_Scaff20855g083434 on AAK49521 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum]
Length = 1210
Score = 25.0 bits (53), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 197 FIREET-MGNNEDK-KKLAEKEYNKNYKQKNKEKIKEYKRNYYQKNK 241
FI ++ G N D+ K +++ YK+KN EK+ K+ +++KNK
Sbjct: 241 FIGDDMDFGGNTDRVKGYINTKFSDYYKEKNVEKLNNIKKEWWEKNK 287
>M.Javanica_Scaff20855g083434 on XP_001610721 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1331
Score = 25.0 bits (53), Expect = 9.6, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 40/91 (43%), Gaps = 23/91 (25%)
Query: 92 NEYNKDYYQQHKKERQDYNRNYVQNNKEKLQQHKKDYYQKNRDRLVQNMRKYRKDNKEKK 151
N +N + YQQ K++ DY+ + +K +H ++ ++++ K +D +E
Sbjct: 1191 NPFNLEGYQQRDKDKGDYS---ITERSDKTTKHCHEF--------LESLEKVLEDKQE-- 1237
Query: 152 RESNRKYYLKEKKEREILQNDRSKVGSIQSD 182
+ + L N S+VG +Q D
Sbjct: 1238 ----------DTSQDHPLTNLLSQVGQLQYD 1258
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff16279g074232
(151 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350415 PfEMP1 (Establishment) [Plasmodium falciparum] 23 6.7
>M.Javanica_Scaff16279g074232 on XP_001350415 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3056
Score = 23.5 bits (49), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 13/64 (20%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 11 VINNIPESNASQPINRAKEDEAVVEEILNAC----GLDTGLPVGIFRMGKKMVNKNRLIK 66
++ N P++N+S N + A + +I+ G ++ L + +M K+ +++++
Sbjct: 138 IVQNHPDTNSSNVCNALERSFADIADIIRGTDLWKGTNSNLEQNLKQMFAKIRENDKVLQ 197
Query: 67 VKFP 70
K+P
Sbjct: 198 DKYP 201
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff18216g078304
(194 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_966151 TLP (Invasion) [Plasmodium falciparum] 26 1.5
XP_818708 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.8
XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum] 24 9.8
>M.Javanica_Scaff18216g078304 on XP_966151 TLP (Invasion) [Plasmodium falciparum]
Length = 1371
Score = 26.2 bits (56), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Query: 110 AAYTRCINDPNIKCCKYIADTATTTVEPYCEIFSSSIVN 148
Y+ CIN+ N+K C+ + +T ++E Y F+ S+ N
Sbjct: 477 QVYSICINNQNVKNCRKL---STHSMEKYGSNFAFSLPN 512
>M.Javanica_Scaff18216g078304 on XP_818708 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 929
Score = 24.6 bits (52), Expect = 4.8, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 25 TATNKIASVLETRA--TLRKLCNTTLEDDKYFAERCDSAVSAAISIPTSSC 73
T++N + SV T ++++ T E DK+ ++ C S + + P S+C
Sbjct: 457 TSSNSLWSVRLTAQLERVKEVLKTWKEADKHVSQLCPSESAVQATSPDSAC 507
>M.Javanica_Scaff18216g078304 on XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2994
Score = 23.9 bits (50), Expect = 9.8, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 37/98 (37%), Gaps = 11/98 (11%)
Query: 103 CKGPLFGAAYTRCINDPNIKCCK-------YIADTATTTVEPYCEIFSSSIVNNMKEICS 155
C+G G Y C D C K + D E C + I N E+
Sbjct: 342 CRGETSGKRY--CSGD-GYDCTKTDISRNIFYMDLDCPRCEEECRKYDEWIENKENELDK 398
Query: 156 DKNTLCESIMNIEKAKQACYD-TFGISVTGEAAPIEIF 192
KN + I ++ ++ YD F +++T + I +F
Sbjct: 399 QKNKYTKEIEKLKDNSKSNYDKNFYLTLTKKYGSINLF 436
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff202g003347
(1918 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001610908 RAP-1 (Adhesin) [Babesia bovis] 28 6.9
XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum] 28 8.4
>M.Javanica_Scaff202g003347 on XP_001610908 RAP-1 (Adhesin) [Babesia bovis]
Length = 565
Score = 27.7 bits (60), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 17/30 (56%)
Query: 1753 DNNETTKNYLEETTQPPTETTKQTTKQKEK 1782
D NE TKNYL+ PT+ Q T +K K
Sbjct: 324 DTNEVTKNYLKANVAEPTKKFMQDTHEKTK 353
>M.Javanica_Scaff202g003347 on XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2858
Score = 27.7 bits (60), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 1363 QQQEQQQEQQQENKHEEREENVEQKHES-QQQQKQIKEYRSQQFAALIATTSRPMRMGVD 1421
Q Q +Q EQ+ E+ ++E +EN H+S +Q K + E+ SQ + + + G D
Sbjct: 1115 QPQWKQMEQKYESLYKEAQENGNSSHKSTTEQDKYMVEFLSQ-----LQKANNGDKTGDD 1169
Query: 1422 YEVADDEGNVEREITNYHTTITQFPKTR 1449
+ G V +E T TQF K +
Sbjct: 1170 KVYSTAAGYVHQEATMNCEKQTQFCKNK 1197
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2382g022543
(239 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_804223 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.60
ABA06437 MSA-2a/b (Invasion) [Babesia bovis] 27 0.76
XP_806744 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.82
XP_811309 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.00
XP_804892 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.2
XP_815479 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.3
XP_812956 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.3
XP_811703 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.6
XP_808758 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.7
XP_818848 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.9
XP_818963 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.2
XP_807802 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.5
XP_813429 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.5
XP_816853 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 9.6
>M.Javanica_Scaff2382g022543 on XP_804223 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 746
Score = 27.7 bits (60), Expect = 0.60, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Query: 184 LLLKEK-KEKLSEIEKKYLEGSRNPLAIRMAALGIYCKFESYENVVK 229
LL+K+ KE +S EKK +GS N +A+R+ K E + VVK
Sbjct: 120 LLMKDNNKELISVYEKKKSDGSYNLVAVRLTG-----KLERIKEVVK 161
>M.Javanica_Scaff2382g022543 on ABA06437 MSA-2a/b (Invasion) [Babesia bovis]
Length = 263
Score = 27.3 bits (59), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 16/90 (17%)
Query: 52 PREDFTSISV---LITHGIHCIDILQEDNPN------FEEHLQFHKEHCLELIKLIYKFF 102
P + F SI V LI + DNP ++ +++KEH I K
Sbjct: 108 PDDIFNSILVRVPLIKAMLSEFSAFLNDNPQRMLGSGTDKITEYYKEH-------ISKKD 160
Query: 103 EENKNYTVQKELCKDFRQAAFPGGRVRRGL 132
+ K+YT + C DF + P R+ RGL
Sbjct: 161 AKVKDYTFLVKFCNDFLDSESPFMRIYRGL 190
>M.Javanica_Scaff2382g022543 on XP_806744 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 789
Score = 27.3 bits (59), Expect = 0.82, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Query: 184 LLLKEK-KEKLSEIEKKYLEGSRNPLAIRMAALGIYCKFESYENVVK 229
LL+K+ KE +S EKK +GS N +A+R+ K E + VVK
Sbjct: 163 LLMKDNNKELISVYEKKKSDGSYNLVALRLTG-----KLERIKEVVK 204
>M.Javanica_Scaff2382g022543 on XP_811309 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1033
Score = 27.3 bits (59), Expect = 1.00, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Query: 184 LLLKEKKEKLSEIEKKYLEGSRNPLAIRMAALGIYCKFESYENVVK 229
LL+KEK ++L + + +GS N +A+R+ K E + VVK
Sbjct: 408 LLMKEKNKELISLYENKKDGSYNLVAVRLTE-----KLERVKEVVK 448
>M.Javanica_Scaff2382g022543 on XP_804892 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1046
Score = 26.9 bits (58), Expect = 1.2, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Query: 184 LLLK-EKKEKLSEIEKKYLEGSRNPLAIRMAALGIYCKFESYENVVK 229
LL+K E KE +S E K +GS N +A+R+ K E + VVK
Sbjct: 424 LLIKDENKELISLYENKKSDGSYNLVAVRLTG-----KLERIKEVVK 465
>M.Javanica_Scaff2382g022543 on XP_815479 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1047
Score = 26.2 bits (56), Expect = 2.3, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 7/48 (14%)
Query: 184 LLLKEK--KEKLSEIEKKYLEGSRNPLAIRMAALGIYCKFESYENVVK 229
LLLK K KE +S E K +GS N +A+R+ K E + VVK
Sbjct: 426 LLLKGKDNKELISLYENKKSDGSYNLVAVRLTE-----KLERIKEVVK 468
>M.Javanica_Scaff2382g022543 on XP_812956 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1005
Score = 26.2 bits (56), Expect = 2.3, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 12/61 (19%)
Query: 170 DDDFKEMSTRNFEKLLLKEK-KEKLSEIEKKYLEGSRNPLAIRMAALGIYCKFESYENVV 228
DDD S LL+K+ KE +S EKK +G+ N +A+R+ K E + VV
Sbjct: 374 DDDAAASS------LLMKDNNKELISVYEKKKNDGAYNLVAVRLTE-----KLERIKEVV 422
Query: 229 K 229
K
Sbjct: 423 K 423
>M.Javanica_Scaff2382g022543 on XP_811703 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1043
Score = 25.8 bits (55), Expect = 2.6, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 11/61 (18%)
Query: 169 DDDDFKEMSTRNFEKLLLKEKKEKLSEIEKKYLEGSRNPLAIRMAALGIYCKFESYENVV 228
+DDD S LL+KEK ++L + + +GS + +A+R+ K E + VV
Sbjct: 408 EDDDAAASS------LLMKEKNKELISLYENKKDGSYSLVAVRLTE-----KLERVKEVV 456
Query: 229 K 229
K
Sbjct: 457 K 457
>M.Javanica_Scaff2382g022543 on XP_808758 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 823
Score = 25.8 bits (55), Expect = 2.7, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Query: 184 LLLKEKKEKLSEIEKKYLEGSRNPLAIRMAALGIYCKFESYENVVK 229
LL+K+K ++L + + +GS N +A+R+ K E + VVK
Sbjct: 416 LLIKDKNKELVSLYENKSDGSYNLVAVRLTE-----KLERIKEVVK 456
>M.Javanica_Scaff2382g022543 on XP_818848 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1053
Score = 25.4 bits (54), Expect = 3.9, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Query: 184 LLLKEK-KEKLSEIEKKYLEGSRNPLAIRMAALGIYCKFESYENVVK 229
LL+K+ KE +S E K +GS N +A+R+ K E + VVK
Sbjct: 422 LLMKDNNKELISLYENKKSDGSYNLVAVRLTE-----KLERIKKVVK 463
>M.Javanica_Scaff2382g022543 on XP_818963 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1055
Score = 25.4 bits (54), Expect = 4.2, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Query: 187 KEKKEKLSEIEKKYLEGSRNPLAIRMAALGIYCKFESYENVVK 229
++ KE +S EKK +GS N +A+R+ K E + VVK
Sbjct: 438 RDNKELVSLHEKKKGDGSYNLVAVRLTE-----KLERIKKVVK 475
>M.Javanica_Scaff2382g022543 on XP_807802 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 805
Score = 24.6 bits (52), Expect = 6.5, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Query: 124 PGGRVRRG---LWGCGWENGKEVGGRRKRGCSGRRKRDLEEVNG 164
PGG+ G L G +NGK GG+ +G G +D EVN
Sbjct: 722 PGGQKPTGQESLRGVTGKNGKTAGGKDVQGEEGIHPQD-REVNA 764
>M.Javanica_Scaff2382g022543 on XP_813429 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 818
Score = 24.6 bits (52), Expect = 6.5, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Query: 124 PGGRVRRG---LWGCGWENGKEVGGRRKRGCSGRRKRDLEEVNG 164
PGG+ G L G +NGK GG+ +G G +D EVN
Sbjct: 735 PGGQKPTGQESLRGVTGKNGKTAGGKDVQGEEGIHPQD-REVNA 777
>M.Javanica_Scaff2382g022543 on XP_816853 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1044
Score = 24.3 bits (51), Expect = 9.6, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 12/62 (19%)
Query: 169 DDDDFKEMSTRNFEKLLLKEKKEKL-SEIEKKYLEGSRNPLAIRMAALGIYCKFESYENV 227
+DDD S LL+K+ +L S E K +GS N +A+R+ K E + V
Sbjct: 412 EDDDAAASS------LLIKDNNNELISLYENKKSDGSYNLVAVRLTE-----KLERIKEV 460
Query: 228 VK 229
VK
Sbjct: 461 VK 462
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff22165g085691
(112 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_829768 VSG (Establishment) [Trypanosoma brucei] 26 0.46
XP_001609315 variant erythrocyte surface antigen-1, alpha subun... 26 0.68
XP_001609040 variant erythrocyte surface antigen-1, alpha subun... 25 1.2
XP_001611900 variant erythrocyte surface antigen-1, alpha subun... 25 1.9
XP_001610497 variant erythrocyte surface antigen-1, alpha subun... 24 2.1
XP_652394 Igl2 (Adhesin) [Entamoeba histolytica] 23 4.9
XP_654447 Igl1 (Adhesin) [Entamoeba histolytica] 23 5.0
XP_001351437 PfEMP1 (Establishment) [Plasmodium falciparum] 23 5.5
>M.Javanica_Scaff22165g085691 on XP_829768 VSG (Establishment) [Trypanosoma brucei]
Length = 485
Score = 26.2 bits (56), Expect = 0.46, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Query: 27 KYDNPCPLGYKCEDDKCNN---VAGEEIALETVSGVFI 61
K C G K ED+KC + + +++AL VS F+
Sbjct: 444 KKQEDCKDGCKWEDNKCKDSSILVNKQLALSVVSAAFV 481
>M.Javanica_Scaff22165g085691 on XP_001609315 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1338
Score = 25.8 bits (55), Expect = 0.68, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 19/45 (42%)
Query: 62 HPHVTSVNIAIPFQHDHQRQHPSLNLVITIMTVHLDISATIKFVF 106
H + S++ I Q QHP NL+ + + DI FV
Sbjct: 1235 HQFLDSLSAVIDMNKQDQEQHPLTNLLTQVGKLQYDIRLPWIFVL 1279
>M.Javanica_Scaff22165g085691 on XP_001609040 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1335
Score = 25.0 bits (53), Expect = 1.2, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 5/28 (17%)
Query: 20 PEPPPCDKYDNPC---PLGYKCEDDKCN 44
P+ PPC+ + N C P+ C DKC+
Sbjct: 847 PKCPPCNDHINKCGQKPVSRYC--DKCH 872
>M.Javanica_Scaff22165g085691 on XP_001611900 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1226
Score = 24.6 bits (52), Expect = 1.9, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 5/28 (17%)
Query: 20 PEPPPCDKYDNPC---PLGYKCEDDKCN 44
P+ PPC+ + + C P+ C DKC+
Sbjct: 846 PKCPPCESHSSKCGQKPVSSYC--DKCH 871
>M.Javanica_Scaff22165g085691 on XP_001610497 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1315
Score = 24.3 bits (51), Expect = 2.1, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 8/83 (9%)
Query: 28 YDNPCPL-GYKCEDDKCNNVAGEEIALETVSGVFIHPHVTSVNIAIPFQHDHQR---QHP 83
Y NP L GY+ +D+K + + E T + H ++S+ I + Q+ QHP
Sbjct: 1178 YGNPFNLEGYEQKDEKSGDYSIEN----TKNPRQCHEFLSSLGAVIKKKEATQKDQEQHP 1233
Query: 84 SLNLVITIMTVHLDISATIKFVF 106
NL+ + + DI FV
Sbjct: 1234 LTNLLSEVGKLQYDIRLPWIFVL 1256
>M.Javanica_Scaff22165g085691 on XP_652394 Igl2 (Adhesin) [Entamoeba histolytica]
Length = 1105
Score = 23.1 bits (48), Expect = 4.9, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 32 CPLGYKCEDDKCNNVAGEEIALETVSGVFI 61
C G+K +D KCN G I + V F+
Sbjct: 1075 CEDGWKLKDGKCNGAKGIFIMMMIVMLAFM 1104
>M.Javanica_Scaff22165g085691 on XP_654447 Igl1 (Adhesin) [Entamoeba histolytica]
Length = 1101
Score = 23.1 bits (48), Expect = 5.0, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 32 CPLGYKCEDDKCNNVAGEEIALETVSGVFI 61
C G+K +D KCN G I + V F+
Sbjct: 1071 CEDGWKLKDGKCNGAKGIFIMMMIVMLAFM 1100
>M.Javanica_Scaff22165g085691 on XP_001351437 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2277
Score = 23.1 bits (48), Expect = 5.5, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 24 PCDKYDNPCPLGYKCEDDKCNNVAGEEIALETV 56
PC K+ C C++ NN +I E +
Sbjct: 1441 PCSKFTVNCNRNDHCDNSNGNNCKDNKITAEKI 1473
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff19382g080671
(249 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_820140 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.32
XP_820147 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.5
XP_805336 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.9
XP_813641 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.9
XP_804902 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.9
XP_820184 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 7.3
>M.Javanica_Scaff19382g080671 on XP_820140 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 875
Score = 28.9 bits (63), Expect = 0.32, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 8/70 (11%)
Query: 139 KVSNEH-QLNNGKENENSSSSSSSTGEDYYS----SIVQLDNFEEN---NETQKFHLNPP 190
+V NE L NG+ NE S GE+ + S+ + N +E + LNP
Sbjct: 665 RVGNEECALGNGESNEISHFYIGGDGENAANKEGVSVTVTNVLLYNRPWDEAEITALNPN 724
Query: 191 KSPPPPPPPN 200
K P PP PN
Sbjct: 725 KDPTPPVTPN 734
>M.Javanica_Scaff19382g080671 on XP_820147 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 878
Score = 26.6 bits (57), Expect = 1.5, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 7/69 (10%)
Query: 139 KVSNEH-QLNNGKENENSSSSSSSTGEDYYS---SIVQLDNFEEN---NETQKFHLNPPK 191
+V NE L NG+ E S GE+ + S+ + N +E + LNP K
Sbjct: 665 RVGNEECALGNGESKEISHFYIGGDGENAANKEVSVTVTNVLLYNRPWDEAEITALNPNK 724
Query: 192 SPPPPPPPN 200
P PP PN
Sbjct: 725 DPTPPVTPN 733
>M.Javanica_Scaff19382g080671 on XP_805336 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 931
Score = 26.6 bits (57), Expect = 1.9, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 8/70 (11%)
Query: 139 KVSNEH-QLNNGKENENSSSSSSSTGEDYYS----SIVQLDNFEEN---NETQKFHLNPP 190
+V NE L NG+ E S GE+ + S+ + N +E + LNP
Sbjct: 669 RVGNEECALGNGESKEISHFYIGGDGENAANNKDVSVTVTNVLLYNRPWDEAEITALNPN 728
Query: 191 KSPPPPPPPN 200
K P PP PN
Sbjct: 729 KDPTPPVTPN 738
>M.Javanica_Scaff19382g080671 on XP_813641 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 873
Score = 26.2 bits (56), Expect = 1.9, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 7/69 (10%)
Query: 139 KVSNEH-QLNNGKENENSSSSSSSTGEDYYS---SIVQLDNFEEN---NETQKFHLNPPK 191
+V NE L N + NE S GE+ + S+ + N +E + LNP K
Sbjct: 663 RVGNEECALRNDESNEISHFYIGGDGENAANKEVSVTVTNVLLYNRPWDEAEITALNPNK 722
Query: 192 SPPPPPPPN 200
P PP PN
Sbjct: 723 DPTPPVTPN 731
>M.Javanica_Scaff19382g080671 on XP_804902 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1042
Score = 25.8 bits (55), Expect = 2.9, Method: Composition-based stats.
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 142 NEHQLNNGKENENSSSSSSSTGEDYYS 168
N HQ +N + +E+ +S ++ EDY S
Sbjct: 788 NSHQEDNAQLSEDKTSQQTTPHEDYKS 814
>M.Javanica_Scaff19382g080671 on XP_820184 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1050
Score = 24.6 bits (52), Expect = 7.3, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 5/62 (8%)
Query: 140 VSNEHQLNNGKE-----NENSSSSSSSTGEDYYSSIVQLDNFEENNETQKFHLNPPKSPP 194
V +EHQ+ E ++ S+ + +TG + S+ D E + L P KS
Sbjct: 887 VDSEHQVQQSTEPSAENDDVRSTGTGTTGAEESLSLEARDGSSERTMSSDSSLTPSKSDA 946
Query: 195 PP 196
P
Sbjct: 947 EP 948
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff16392g074484
(115 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff17838g077521
(170 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_827754 VSG (Establishment) [Trypanosoma brucei] 27 0.48
XP_965999 PfEMP1 (Establishment) [Plasmodium falciparum] 26 1.4
XP_818859 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.8
XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum] 25 3.7
XP_844158 VSG (Establishment) [Trypanosoma brucei] 24 4.3
XP_001352240 PfEMP1 (Establishment) [Plasmodium falciparum] 24 6.2
XP_807802 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 6.9
XP_816853 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 9.2
>M.Javanica_Scaff17838g077521 on XP_827754 VSG (Establishment) [Trypanosoma brucei]
Length = 480
Score = 27.3 bits (59), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 21/48 (43%)
Query: 25 KDVEWGYEEQNGPHTWEEKCKEGKNQSPINIQTKSLKINCLDKLELVN 72
K V + GP T EKCK+ K+++ K C D LVN
Sbjct: 417 KSVSVTQAQTGGPETTTEKCKDNKSEAVCKDGCKWEGTECKDSSILVN 464
>M.Javanica_Scaff17838g077521 on XP_965999 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1325
Score = 26.2 bits (56), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)
Query: 42 EKCKEGKNQSPINIQTKSLKINCLDKL----ELVNYNNSGIVEVNNNGHGVIV 90
EKC +N+ N+ T+ K++ L +L+ +NNSG+ N+ +GV+V
Sbjct: 485 EKCPNEENK---NVCTRFDKVSSCTSLFFKNDLIEWNNSGVKNKENDNNGVLV 534
>M.Javanica_Scaff17838g077521 on XP_818859 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 867
Score = 25.4 bits (54), Expect = 1.8, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 17/88 (19%)
Query: 82 NNNGHGVIV-----KGFEHWDQKKRPYITRGGLKGKYVLLQYHFHWAVDHLEG----SEH 132
+N+G V++ K W+ Y+T G + ++ W D +G H
Sbjct: 269 DNDGKSVLLSMRLFKSGNKWELSS--YVTGKGCRDPTLV-----KWEEDKYDGILFMMAH 321
Query: 133 CIDGKYYPVELHLVHVKEGYTLAEDLEK 160
C DG YY V + H YTL E + +
Sbjct: 322 C-DGGYYDVYMSTPHGVSWYTLGEPINR 348
>M.Javanica_Scaff17838g077521 on XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2994
Score = 24.6 bits (52), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 102 PYITRGGLKGKYVLLQYHFHWAVDHLEGSEHCIDGKYYP 140
P T G+K +++ HF D+ +HC K YP
Sbjct: 851 PAATTPGVKPPCDIVEKHFKDKHDNTGAIDHCNPKKDYP 889
>M.Javanica_Scaff17838g077521 on XP_844158 VSG (Establishment) [Trypanosoma brucei]
Length = 490
Score = 24.3 bits (51), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 81 VNNNGHGVIVKGFEHWDQKKRPYITRGGLK 110
NN G+ +K + W++ +R I GG K
Sbjct: 92 TNNGGNNRGIKKWSVWEEARRKLIDEGGTK 121
>M.Javanica_Scaff17838g077521 on XP_001352240 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1315
Score = 23.9 bits (50), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 7/53 (13%)
Query: 42 EKCKEGKNQSPINIQTKSLKI-NCLD---KLELVNYNNSGIVEVNNNGHGVIV 90
EKC +N+ N+ T+ K+ +C K +L +NNSG+ N+ +GV+V
Sbjct: 475 EKCPNEENK---NVCTRFDKVYSCTSLSFKNDLSEWNNSGVKNKENDNNGVLV 524
>M.Javanica_Scaff17838g077521 on XP_807802 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 805
Score = 23.9 bits (50), Expect = 6.9, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 2 NFLKIFLIFPFLLLLIKLILGADKDVEWGYEEQNGPHTWEEKCKEG 47
N + F LLLL+ ++ + + G EEQ+ T++ K G
Sbjct: 38 NMSRHVFTFAVLLLLVVMMCDTGRAAQAGVEEQSSGPTFQWKAITG 83
>M.Javanica_Scaff17838g077521 on XP_816853 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1044
Score = 23.5 bits (49), Expect = 9.2, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 132 HCIDGKYYPVELHLVHVKEGYTLAEDLEK 160
HC G YY V + +H YTL E + +
Sbjct: 322 HCAGG-YYDVYMSTLHGVSWYTLGESINR 349
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]