BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff29003g095807
(151 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAC37226 SBP1 (Others) [Babesia bovis] 28 0.20
XP_845633 VSG (Establishment) [Trypanosoma brucei] 25 3.0
XP_001611441 variant erythrocyte surface antigen-1, beta subuni... 23 7.7
>M.Javanica_Scaff29003g095807 on AAC37226 SBP1 (Others) [Babesia bovis]
Length = 596
Score = 28.1 bits (61), Expect = 0.20, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 51 PTRPPTTTPKPTPCENDYDCPSGYKCDYKISQCCWWGNRG 90
P P TP TP E + P+ + S+ C+ G +G
Sbjct: 400 PAETPAETPAETPAETPAETPAEKPAEKPASRPCYGGRKG 439
>M.Javanica_Scaff29003g095807 on XP_845633 VSG (Establishment) [Trypanosoma brucei]
Length = 488
Score = 24.6 bits (52), Expect = 3.0, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 44 GRYCRIPPTRPPTTTPKPT 62
G +C IP +R P+TT T
Sbjct: 153 GEHCTIPTSRGPSTTDSCT 171
>M.Javanica_Scaff29003g095807 on XP_001611441 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1205
Score = 23.5 bits (49), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 5 LLFFIQMWLVLSDAHKQCCWRGNR 28
L +Q W+ +D +CC +G++
Sbjct: 125 LALGLQKWVGWNDKEDECCLKGDK 148
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7235g047277
(221 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff496g006922
(515 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum] 30 0.51
XP_001350082 Rh2b (Adhesin) [Plasmodium falciparum] 26 5.3
XP_812607 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 6.0
>M.Javanica_Scaff496g006922 on XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum]
Length = 3130
Score = 29.6 bits (65), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 350 TDDLNNVTEVTSNVATDPGIPCLDDSDATRYMNLKEVRQ--ALNIPSHLGNWSICNEDVS 407
TD LNNV + NV I L DS R ++ E+ +NI + +I E VS
Sbjct: 623 TDYLNNVKYIEENVTHINEIILLKDSITQRIADIDELNSLNLININDFINEKNISQEKVS 682
Query: 408 NNYNQIY 414
N N++Y
Sbjct: 683 YNLNKLY 689
Score = 27.3 bits (59), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 19/32 (59%)
Query: 391 NIPSHLGNWSICNEDVSNNYNQIYSDMSPFVK 422
NI + +IC E + NNYN I SD+S F K
Sbjct: 2206 NIREQENDTNICFEYIQNNYNFIKSDISIFNK 2237
>M.Javanica_Scaff496g006922 on XP_001350082 Rh2b (Adhesin) [Plasmodium falciparum]
Length = 1115
Score = 26.2 bits (56), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 19/32 (59%)
Query: 391 NIPSHLGNWSICNEDVSNNYNQIYSDMSPFVK 422
NI + +IC E + NNYN I SD+S F K
Sbjct: 67 NIREQENDTNICFEYIQNNYNFIKSDISIFNK 98
>M.Javanica_Scaff496g006922 on XP_812607 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 957
Score = 26.2 bits (56), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 44/125 (35%), Gaps = 20/125 (16%)
Query: 247 HGLVDEKLWQLMREECCNGCFDGC-----DLSMMSNYFCQNKVEEIFEFVWLGGLNPYDL 301
H L D K W+L + GC D D +M C + ++E G
Sbjct: 293 HSLKDAKSWKLSKGMSDGGCSDPSVVEWKDKKLMMMTACDDGRRRVYES----GDKGESW 348
Query: 302 YRDCDTFSPL---NSPKMHALRRGLLPTKLNERIVAKSILNRNTRSARFINTDDLNNVTE 358
T S + K+ A+R G + K++ + N R+ + + VTE
Sbjct: 349 TEALGTLSRVWVNKHEKVKAVRSGFITAKIDS--------DENNRNVMLVTLPVYSEVTE 400
Query: 359 VTSNV 363
NV
Sbjct: 401 KGGNV 405
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4072g032726
(311 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAR88085 TbcatB (Cysteine proteases) [Trypanosoma brucei] 59 9e-11
PF14_0553 Falcipain1 (Cysteine protease) [Plasmodium falciparum] 36 0.003
EAN82385 Cruzipain (Cysteine protease) [Trypanosoma cruzi] 30 0.034
BAA96736 Cruzipain (Cysteine protease) [Trypanosoma cruzi] 27 0.22
BAA96737 Cruzipain (Cysteine protease) [Trypanosoma cruzi] 27 0.35
AAX77225 Falcipain 2' (Cysteine protease) [Plasmodium falcipa... 29 0.36
P92132 CP2 (Cysteine protease) [Giardia duodenalis] 28 0.46
CAC67416 Brucipain (Cysteine proteases) [Trypanosoma brucei] 28 0.58
XP_001347833 Falcipain 3 (Cysteine protease) [Plasmodium falc... 28 0.75
CAA54437 CP3 (Cysteine protease) [Trichomonas vaginalis] 25 3.9
CAA70921 MIC5 (Others) [Toxoplasma gondii] 25 6.3
>M.Javanica_Scaff4072g032726 on AAR88085 TbcatB (Cysteine proteases) [Trypanosoma brucei]
Length = 340
Score = 58.5 bits (140), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 95/218 (43%), Gaps = 37/218 (16%)
Query: 1 MLKIINIFLIILIIKIASSLKLSIEETLNKAKILVEKINLEAKG-WDAK---LHKRFALM 56
+++ F I +A + L E+ +K V+++N +G W AK + + L
Sbjct: 3 LMRACITFCIASTAVVAVNAALVAEDAPVLSKAFVDRVNRLNRGIWKAKYDGVMQNITLR 62
Query: 57 EDKHLKMLGVKLSKTLAPPPPRNESKEENKGEGKHIRRKRQTSCTDNVGFDARNTFQCCA 116
E K L + +K + + P R ++EE R +S FD+ + C
Sbjct: 63 EAKRLNGV-IKKNNNASILPKRRFTEEE-------ARAPLPSS------FDSAEAWPNCP 108
Query: 117 GI--IGAIQAKTRCLRIAVSSAFTDRYCISRMKAGNPPAFNDPTARFSAADMLSCATY-T 173
I I A C +A +SA +DR+C SA D+L+C +
Sbjct: 109 TIPQIADQSACGSCWAVAAASAMSDRFCTMGGVQ---------DVHISAGDLLACCSDCG 159
Query: 174 SGCNGGDPYNAWLWTYTSGIVTGTDYTWATGCKPYPFP 211
GCNGGDP AW + ++G+V +DY C+PYPFP
Sbjct: 160 DGCNGGDPDRAWAYFSSTGLV--SDY-----CQPYPFP 190
>M.Javanica_Scaff4072g032726 on PF14_0553 Falcipain1 (Cysteine protease) [Plasmodium falciparum]
Length = 569
Score = 35.8 bits (81), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 12/47 (25%), Positives = 25/47 (53%)
Query: 155 NDPTARFSAADMLSCATYTSGCNGGDPYNAWLWTYTSGIVTGTDYTW 201
N FS +++ C+ GC+GG P+ ++L+ + + G +Y +
Sbjct: 374 NKNILSFSEQEVVDCSKDNFGCDGGHPFYSFLYVLQNELCLGDEYKY 420
>M.Javanica_Scaff4072g032726 on EAN82385 Cruzipain (Cysteine protease) [Trypanosoma cruzi]
Length = 70
Score = 29.6 bits (65), Expect = 0.034, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Query: 157 PTARFSAADMLSCATYTSGCNGGDPYNAWLWTY---TSGIVTGTDYTWATG 204
P S ++SC SGC GG NA+ W + T Y +A+G
Sbjct: 16 PLTNLSEQMLVSCDKTDSGCGGGLMNNAFEWIVQENNGAVYTEDSYPYASG 66
>M.Javanica_Scaff4072g032726 on BAA96736 Cruzipain (Cysteine protease) [Trypanosoma cruzi]
Length = 70
Score = 27.3 bits (59), Expect = 0.22, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 157 PTARFSAADMLSCATYTSGCNGGDPYNAWLW 187
P S ++SC SGC+GG NA+ W
Sbjct: 25 PLTNLSEQMLVSCDKTDSGCSGGLMNNAFEW 55
>M.Javanica_Scaff4072g032726 on BAA96737 Cruzipain (Cysteine protease) [Trypanosoma cruzi]
Length = 70
Score = 26.9 bits (58), Expect = 0.35, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 157 PTARFSAADMLSCATYTSGCNGGDPYNAWLW 187
P S ++SC SGC GG NA+ W
Sbjct: 25 PLTNLSEQMLVSCDKTDSGCGGGLMNNAFEW 55
>M.Javanica_Scaff4072g032726 on AAX77225 Falcipain 2' (Cysteine protease) [Plasmodium
falciparum]
Length = 484
Score = 28.9 bits (63), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 38/113 (33%), Gaps = 19/113 (16%)
Query: 161 FSAADMLSCATYTSGCNGGDPYNAWL-WTYTSGIVTGTDYTWATGCKPYPFPPHGTNMYT 219
S +++ C+ GCNGG NA+ GI T D YP+ N+
Sbjct: 308 LSEQELVDCSFKNYGCNGGLINNAFEDMIELGGICTDDD---------YPYVSDAPNLCN 358
Query: 220 TPACTSAVQLVSLL---------ASRFFSPFWAMSKIWNYFTLSGRIAFCKEC 263
CT + + L A RF P + + F F EC
Sbjct: 359 IDRCTEKYGIKNYLSVPDNKLKEALRFLGPISISVAVSDDFAFYKEGIFDGEC 411
>M.Javanica_Scaff4072g032726 on P92132 CP2 (Cysteine protease) [Giardia duodenalis]
Length = 255
Score = 28.5 bits (62), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 33/90 (36%), Gaps = 8/90 (8%)
Query: 106 FDARNTFQCCAGIIGAIQAKTRCLRIAVSSAFTDRYCISRMKAGNPPAFNDPTARFSAAD 165
FD R + C + C + + F DR C++ + ++S
Sbjct: 79 FDFREEYPHCIPEVVDQGGCGSCWAFSSVATFGDRRCVA--------GLDKKPVKYSPQY 130
Query: 166 MLSCATYTSGCNGGDPYNAWLWTYTSGIVT 195
++SC CNGG N W + +G T
Sbjct: 131 VVSCDHGDMACNGGWLPNVWKFLTKTGTTT 160
>M.Javanica_Scaff4072g032726 on CAC67416 Brucipain (Cysteine proteases) [Trypanosoma brucei]
Length = 450
Score = 28.5 bits (62), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Query: 156 DPTARFSAADMLSCATYTSGCNGGDPYNAWLWTYTS---GIVTGTDYTWATGCKPYP 209
+P S ++SC T GC GG NA+ W S + T Y + +G P
Sbjct: 168 NPLVSLSEQMLVSCDTIDFGCGGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQP 224
>M.Javanica_Scaff4072g032726 on XP_001347833 Falcipain 3 (Cysteine protease) [Plasmodium
falciparum]
Length = 482
Score = 28.1 bits (61), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 38/113 (33%), Gaps = 19/113 (16%)
Query: 161 FSAADMLSCATYTSGCNGGDPYNAWL-WTYTSGIVTGTDYTWATGCKPYPFPPHGTNMYT 219
S +++ C+ GCNGG NA+ GI T D YP+ N+
Sbjct: 306 LSEQELVDCSFKNYGCNGGLINNAFEDMIELGGICTDDD---------YPYVSDAPNLCN 356
Query: 220 TPACTSAVQLVSLL---------ASRFFSPFWAMSKIWNYFTLSGRIAFCKEC 263
CT + + L A RF P + + F F EC
Sbjct: 357 IDRCTEKYGIKNYLSVPDNKLKEALRFLGPISISIAVSDDFPFYKEGIFDGEC 409
>M.Javanica_Scaff4072g032726 on CAA54437 CP3 (Cysteine protease) [Trichomonas vaginalis]
Length = 255
Score = 25.4 bits (54), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 161 FSAADMLSCATYTSGCNGGDPYNAW 185
+ +M+ C GC+GGD Y A+
Sbjct: 147 LAEQNMVDCVDTCYGCDGGDEYLAY 171
>M.Javanica_Scaff4072g032726 on CAA70921 MIC5 (Others) [Toxoplasma gondii]
Length = 231
Score = 24.6 bits (52), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 18/25 (72%)
Query: 278 LATHLKSKHPEKHKQFLDQSTEVKA 302
LA+HL+S+H E ++ +D +V++
Sbjct: 84 LASHLRSRHMEAGRRTMDTQNDVES 108
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5311g038868
(174 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_829791 VSG (Establishment) [Trypanosoma brucei] 27 1.00
XP_965997 PfEMP1 (Establishment) [Plasmodium falciparum] 26 1.6
XP_845633 VSG (Establishment) [Trypanosoma brucei] 25 4.2
>M.Javanica_Scaff5311g038868 on XP_829791 VSG (Establishment) [Trypanosoma brucei]
Length = 506
Score = 26.6 bits (57), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 70 DYESYRNPEKRPMT---EEMQQVEQFQRKSSPRKGKKAK 105
DYESY N + P T + MQQ+E R + RK KK K
Sbjct: 323 DYESYYNMDLTPKTTRIKWMQQLEIAARLLNERKEKKEK 361
>M.Javanica_Scaff5311g038868 on XP_965997 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2879
Score = 25.8 bits (55), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Query: 49 LHRRFKRGNCICGGGEGATDDDYESYRNPEKRPMTEEMQQVEQFQRKSS 97
L ++ K+ IC G DY+ N ++P T Q +Q Q KSS
Sbjct: 1574 LSKKLKK---ICQNGTTTDKCDYKCMENASRQPQTSACSQEQQQQNKSS 1619
>M.Javanica_Scaff5311g038868 on XP_845633 VSG (Establishment) [Trypanosoma brucei]
Length = 488
Score = 24.6 bits (52), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 50 HRRFKRGNCICGGGEGAT 67
HR +K+G C G GA+
Sbjct: 222 HRSYKKGACATSGDSGAS 239
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff482g006769
(74 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_817637 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.060
XP_821078 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.15
XP_821102 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.24
XP_822026 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.61
XP_816886 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 0.80
XP_804105 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.8
XP_001609101 variant erythrocyte surface antigen-1, alpha subun... 23 1.9
XP_805204 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.0
XP_001609163 variant erythrocyte surface antigen-1, alpha subun... 23 2.1
XP_812697 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.4
XP_818382 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 3.8
XP_807798 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.8
XP_810383 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 6.2
XP_813500 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 7.2
XP_810237 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 8.3
XP_820181 Trans-sialidase (Invasion) [Trypanosoma cruzi] 21 9.5
>M.Javanica_Scaff482g006769 on XP_817637 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 986
Score = 27.3 bits (59), Expect = 0.060, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
Query: 25 EGATYQFEKPPPKNSSDLAKNSL-----KEEGGKGGGKSKRSPQE 64
EG + Q E PPP + D+ K + +EE G ++R QE
Sbjct: 855 EGTSLQEEVPPPLGTEDIPKADVERPIYEEEATSPEGATERQTQE 899
>M.Javanica_Scaff482g006769 on XP_821078 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 940
Score = 26.2 bits (56), Expect = 0.15, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 8/50 (16%)
Query: 17 LFIVKINGEGATYQFEKPPPKNSSDLAKNSLKEEGGKGGGKSKRSPQEWD 66
L VK++GEG EK P + S D N K + GGG++K ++WD
Sbjct: 589 LLGVKLDGEG-----EKKPMELSYD---NEKKWQFLCGGGQNKEHSRDWD 630
>M.Javanica_Scaff482g006769 on XP_821102 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 929
Score = 25.8 bits (55), Expect = 0.24, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
Query: 25 EGATYQFEKPPPKNSSDLAKNSL-----KEEGGKGGGKSKRSPQE 64
EG T Q E PPP + D+ K + +EE ++R QE
Sbjct: 798 EGTTLQEEVPPPLGTEDIPKADVERPIYEEEATSPEWATERQTQE 842
>M.Javanica_Scaff482g006769 on XP_822026 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 888
Score = 24.6 bits (52), Expect = 0.61, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 48 KEEGGKGGGKSKRSPQEWDLNAFAFSG 74
K EGG G K + P ++NA A +G
Sbjct: 825 KREGGTDGQKEEVQPHNGEVNATALNG 851
>M.Javanica_Scaff482g006769 on XP_816886 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 905
Score = 24.3 bits (51), Expect = 0.80, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
Query: 25 EGATYQFEKPPPKNSSDLAKNSL-----KEEGGKGGGKSKRSPQE 64
EG + Q E PPP + D+ K + +EE ++R QE
Sbjct: 774 EGTSLQEEVPPPFGTEDIPKADVERPIYEEEATSPEWATERQTQE 818
>M.Javanica_Scaff482g006769 on XP_804105 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1017
Score = 23.5 bits (49), Expect = 1.8, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 17/41 (41%)
Query: 25 EGATYQFEKPPPKNSSDLAKNSLKEEGGKGGGKSKRSPQEW 65
E + Q E PPP + D+ K ++ + S EW
Sbjct: 886 ESTSLQEEVPPPLGTEDIPKADVERPIHEEEATSPEGATEW 926
>M.Javanica_Scaff482g006769 on XP_001609101 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1359
Score = 23.1 bits (48), Expect = 1.9, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 34 PPPKNSSDLAKNSLKEEGGKGGGKSKRSPQEWDLNA 69
P K+ D AK LK+E GGK + S + NA
Sbjct: 480 PAYKDMLDYAKERLKKEAPDVGGKRQLSFYQQGRNA 515
>M.Javanica_Scaff482g006769 on XP_805204 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 978
Score = 23.1 bits (48), Expect = 2.0, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 5/45 (11%)
Query: 25 EGATYQFEKPPPKNSSDLAKNSL-----KEEGGKGGGKSKRSPQE 64
EG T Q E PPP + + K + +EE ++R QE
Sbjct: 847 EGTTLQEEVPPPLGTEGIPKADVERLIHEEEATSPEEATERQTQE 891
>M.Javanica_Scaff482g006769 on XP_001609163 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1360
Score = 23.1 bits (48), Expect = 2.1, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 34 PPPKNSSDLAKNSLKEEGGKGGGKSKRSPQEWDLNA 69
P K+ D AK LK+E GGK + S + NA
Sbjct: 480 PAYKDMLDYAKERLKKEAPDVGGKRQLSFYQQGRNA 515
>M.Javanica_Scaff482g006769 on XP_812697 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 911
Score = 22.7 bits (47), Expect = 3.4, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 20/35 (57%)
Query: 39 SSDLAKNSLKEEGGKGGGKSKRSPQEWDLNAFAFS 73
S+ + + +++ G G + + PQ+ D+NA A S
Sbjct: 838 STAVGEPTMETREGTNGQEEQIHPQDKDVNATALS 872
>M.Javanica_Scaff482g006769 on XP_818382 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 890
Score = 22.3 bits (46), Expect = 3.8, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 35 PPKNSSDLAKNSLKEEGGKGGGKSK 59
P + D A +SL E GK GG K
Sbjct: 376 PVPGADDAAASSLLYESGKDGGNEK 400
>M.Javanica_Scaff482g006769 on XP_807798 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 875
Score = 21.9 bits (45), Expect = 5.8, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 50 EGGKGGGKSKRSPQEWDLNAFAFS 73
EGG G + + + Q+ D+NA A S
Sbjct: 840 EGGTNGQEEEFNTQDRDVNAAALS 863
>M.Javanica_Scaff482g006769 on XP_810383 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 928
Score = 21.9 bits (45), Expect = 6.2, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 51 GGKGGGKSKRSPQEWDLNAFAFS 73
GG K + PQ+ D+NA A S
Sbjct: 868 GGTDAQKEEVHPQDGDVNATALS 890
>M.Javanica_Scaff482g006769 on XP_813500 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 898
Score = 21.6 bits (44), Expect = 7.2, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 38 NSSDLAKNSLKEEGGKGGGKSKRSPQEWDLNAFAFS 73
+SSD EGG GG + + Q ++NA A S
Sbjct: 825 SSSDGEPTVETREGGTSGGVEEVNTQIREVNATALS 860
>M.Javanica_Scaff482g006769 on XP_810237 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 922
Score = 21.6 bits (44), Expect = 8.3, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 12/26 (46%)
Query: 34 PPPKNSSDLAKNSLKEEGGKGGGKSK 59
P D A +SL E GK GG K
Sbjct: 409 PVSGEGDDAAASSLLYESGKDGGNEK 434
>M.Javanica_Scaff482g006769 on XP_820181 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 648
Score = 21.2 bits (43), Expect = 9.5, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 9 LLTFFISFLFIVKINGEGATYQFEKPP 35
+LTF + L +V G G + E P
Sbjct: 5 VLTFAVLLLLVVMCCGSGGAHAVESKP 31
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3455g029252
(69 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_818708 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.54
XP_813726 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.7
XP_817007 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.3
XP_817537 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.6
XP_828094 VSG (Establishment) [Trypanosoma brucei] 22 5.9
XP_811703 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 6.5
XP_811309 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 6.5
XP_814899 Trans-sialidase (Invasion) [Trypanosoma cruzi] 21 9.6
>M.Javanica_Scaff3455g029252 on XP_818708 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 929
Score = 24.6 bits (52), Expect = 0.54, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 13/26 (50%)
Query: 41 TQPARESTVQGLNRPGTLLTENSTGQ 66
T P R V GL GT+ NS GQ
Sbjct: 748 TTPPRSPAVSGLPVEGTVTQSNSAGQ 773
>M.Javanica_Scaff3455g029252 on XP_813726 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 924
Score = 23.1 bits (48), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 13/26 (50%)
Query: 41 TQPARESTVQGLNRPGTLLTENSTGQ 66
T P R V GL GT+ NS GQ
Sbjct: 743 TTPPRSPAVSGLPVEGTVTQSNSAGQ 768
>M.Javanica_Scaff3455g029252 on XP_817007 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 910
Score = 21.9 bits (45), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 12/24 (50%)
Query: 43 PARESTVQGLNRPGTLLTENSTGQ 66
P R V GL GT+ NS GQ
Sbjct: 732 PPRSPAVSGLPVEGTVSRSNSAGQ 755
>M.Javanica_Scaff3455g029252 on XP_817537 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 762
Score = 21.6 bits (44), Expect = 5.6, Method: Composition-based stats.
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 37 NWQWTQPARESTVQGLNRPGTL 58
N++W ++ TV+ L PG L
Sbjct: 75 NFEWKGIPKDVTVESLGAPGLL 96
>M.Javanica_Scaff3455g029252 on XP_828094 VSG (Establishment) [Trypanosoma brucei]
Length = 483
Score = 21.6 bits (44), Expect = 5.9, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 39 QWTQPARESTVQGLNRPGTLLTENSTGQGLY 69
+W Q + + V N+P T L +N QG Y
Sbjct: 120 KWQQDYQTAEVA--NKPKTWLADNPQPQGTY 148
>M.Javanica_Scaff3455g029252 on XP_811703 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1043
Score = 21.6 bits (44), Expect = 6.5, Method: Composition-based stats.
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 45 RESTVQGLNRPGTLLTENSTGQ 66
++ +QG N PG LL + + +
Sbjct: 192 KKQQIQGTNEPGLLLVKGTVAE 213
>M.Javanica_Scaff3455g029252 on XP_811309 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1033
Score = 21.6 bits (44), Expect = 6.5, Method: Composition-based stats.
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 45 RESTVQGLNRPGTLLTENS 63
++S V+G N PG LL + +
Sbjct: 184 KKSQVEGTNEPGLLLVKGT 202
>M.Javanica_Scaff3455g029252 on XP_814899 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 827
Score = 21.2 bits (43), Expect = 9.6, Method: Composition-based stats.
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 37 NWQWTQPARESTVQGLNRPGTLLTEN 62
N++W ++TV+ L PG L N
Sbjct: 73 NFEWKDIPEDATVELLGVPGLLKVGN 98
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7675g049024
(282 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAY44830 MSA-1 (Invasion) [Babesia bovis] 27 0.99
XP_802664 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.3
XP_805943 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 3.0
ABR92027 MSA-1 (Invasion) [Babesia bovis] 25 4.9
ABR92031 MSA-1 (Invasion) [Babesia bovis] 25 4.9
ABR92029 MSA-1 (Invasion) [Babesia bovis] 25 5.0
AAY44834 MSA-1 (Invasion) [Babesia bovis] 25 7.2
AAY44829 MSA-1 (Invasion) [Babesia bovis] 25 7.3
XP_804688 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 7.6
XP_804548 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 9.1
XP_001219207 VSG (Establishment) [Trypanosoma brucei] 24 9.7
>M.Javanica_Scaff7675g049024 on AAY44830 MSA-1 (Invasion) [Babesia bovis]
Length = 322
Score = 27.3 bits (59), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 78 FPRGLTWANKLTKDKNEFWAPDISFHRNIFWLYYSVPYKKGKHTSFIGLATSTSGLPGTW 137
F +GL W++ LT D + D F ++I+ Y+V + G+A G G
Sbjct: 142 FLKGLNWSSGLT-DGDRKKVEDY-FKKHIYKEEYNV--------NVDGMAAVCKGFLGEG 191
Query: 138 TDHQTIIMSSNEYSR 152
+D +++S +E++R
Sbjct: 192 SDFNKLVVSFDEFAR 206
>M.Javanica_Scaff7675g049024 on XP_802664 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 367
Score = 26.9 bits (58), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 14/59 (23%)
Query: 233 CDGLQSTYSIHVGRSKS---PNGPY-----FDDRNIPMLNGG------GMLLLSSNGNE 277
C G +S YS+HV R + NG Y ++ N+ + GG G+LL+ N +E
Sbjct: 165 CTGSKSFYSVHVSRPTTVVKGNGIYMLAGKYNRENVAVCRGGADAASWGLLLVKGNVSE 223
>M.Javanica_Scaff7675g049024 on XP_805943 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 983
Score = 26.2 bits (56), Expect = 3.0, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 17/40 (42%)
Query: 127 ATSTSGLPGTWTDHQTIIMSSNEYSRFNAIDPNLLVDKNG 166
A S GTWTD I+ + + P +VD NG
Sbjct: 96 AKSMKSNGGTWTDGTAIVFDHYDVKIDRLLSPTTIVDGNG 135
>M.Javanica_Scaff7675g049024 on ABR92027 MSA-1 (Invasion) [Babesia bovis]
Length = 330
Score = 25.0 bits (53), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/78 (20%), Positives = 38/78 (48%), Gaps = 16/78 (20%)
Query: 78 FPRGLTWANKLT---KDKNEFWAPDISFHRNIFWLYYSVPYKKGKHTSFIGLATSTSGLP 134
F +GL W++++T + K E + F ++++ Y V + G+A G
Sbjct: 142 FLKGLDWSSEITEGDRKKAEEY-----FKKHVYKEEYKVNVE--------GMAAVCKGFL 188
Query: 135 GTWTDHQTIIMSSNEYSR 152
G +D ++++ ++++R
Sbjct: 189 GDGSDFNKLVVTFDDFAR 206
>M.Javanica_Scaff7675g049024 on ABR92031 MSA-1 (Invasion) [Babesia bovis]
Length = 330
Score = 25.0 bits (53), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/78 (20%), Positives = 38/78 (48%), Gaps = 16/78 (20%)
Query: 78 FPRGLTWANKLT---KDKNEFWAPDISFHRNIFWLYYSVPYKKGKHTSFIGLATSTSGLP 134
F +GL W++++T + K E + F ++++ Y V + G+A G
Sbjct: 142 FLKGLDWSSEITEGDRKKAEEY-----FKKHVYKEEYKVNVE--------GMAAVCKGFL 188
Query: 135 GTWTDHQTIIMSSNEYSR 152
G +D ++++ ++++R
Sbjct: 189 GDGSDFNKLVVTFDDFAR 206
>M.Javanica_Scaff7675g049024 on ABR92029 MSA-1 (Invasion) [Babesia bovis]
Length = 330
Score = 25.0 bits (53), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/78 (20%), Positives = 38/78 (48%), Gaps = 16/78 (20%)
Query: 78 FPRGLTWANKLT---KDKNEFWAPDISFHRNIFWLYYSVPYKKGKHTSFIGLATSTSGLP 134
F +GL W++++T + K E + F ++++ Y V + G+A G
Sbjct: 142 FLKGLDWSSEITEGDRKKAEEY-----FKKHVYKEEYKVNVE--------GMAAVCKGFL 188
Query: 135 GTWTDHQTIIMSSNEYSR 152
G +D ++++ ++++R
Sbjct: 189 GDGSDFNKLVVTFDDFAR 206
>M.Javanica_Scaff7675g049024 on AAY44834 MSA-1 (Invasion) [Babesia bovis]
Length = 320
Score = 24.6 bits (52), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 10/75 (13%)
Query: 78 FPRGLTWANKLTKDKNEFWAPDISFHRNIFWLYYSVPYKKGKHTSFIGLATSTSGLPGTW 137
F +GL W++ LT D + D F ++I+ Y+V + G+A G
Sbjct: 142 FLKGLNWSSGLT-DGDRKKVEDY-FKKHIYKEEYNV--------NVDGMAAVCKGFLSEG 191
Query: 138 TDHQTIIMSSNEYSR 152
+D +++S +E++R
Sbjct: 192 SDFNKLVVSFDEFAR 206
>M.Javanica_Scaff7675g049024 on AAY44829 MSA-1 (Invasion) [Babesia bovis]
Length = 318
Score = 24.6 bits (52), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 10/75 (13%)
Query: 78 FPRGLTWANKLTKDKNEFWAPDISFHRNIFWLYYSVPYKKGKHTSFIGLATSTSGLPGTW 137
F +GL W++ LT D + D F ++I+ Y+V + G+A G
Sbjct: 142 FLKGLNWSSGLT-DGDRKKVEDY-FKKHIYKEEYNV--------NVDGMAAVCKGFLSEG 191
Query: 138 TDHQTIIMSSNEYSR 152
+D +++S +E++R
Sbjct: 192 SDFNKLVVSFDEFAR 206
>M.Javanica_Scaff7675g049024 on XP_804688 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 704
Score = 24.6 bits (52), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 5/41 (12%)
Query: 48 SFIIYSTHNGIEARISNDLITWKRAFPNSAFPRGLTWANKL 88
S IIYST NG +S D+ + N +PR W L
Sbjct: 295 SMIIYSTDNGSTWSLSEDI-----SPANCRYPRITEWEGSL 330
>M.Javanica_Scaff7675g049024 on XP_804548 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 691
Score = 24.3 bits (51), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 263 LNGGGMLLLSSNGNEIGPAQ 282
L G G+ +L+SNGN + P Q
Sbjct: 197 LGGSGVAILASNGNLVYPVQ 216
>M.Javanica_Scaff7675g049024 on XP_001219207 VSG (Establishment) [Trypanosoma brucei]
Length = 453
Score = 24.3 bits (51), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 11/77 (14%)
Query: 73 FPNSAFPRGLTWANKLTKDKNEFWAPDISFHRNIFWLYYSVPYKKGKHTSFIGL------ 126
F + A R T ++LT+ + ++PD+ H + Y +GK TS + L
Sbjct: 100 FKHEAEERLKT--SRLTEPELTDYSPDVLDHLEKAFKLYQASELEGKQTSIVTLQEGINS 157
Query: 127 ---ATSTSGLPGTWTDH 140
+ SG W DH
Sbjct: 158 IMYGENDSGGNSLWGDH 174
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff26700g092728
(395 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_846273 VSG (Establishment) [Trypanosoma brucei] 28 0.84
XP_001349030 PfEMP1 (Establishment) [Plasmodium falciparum] 28 1.00
XP_001609565 variant erythrocyte surface antigen-1, alpha subun... 26 4.0
XP_001349437 PfEMP1 (Establishment) [Plasmodium falciparum] 26 4.9
XP_805883 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 9.7
>M.Javanica_Scaff26700g092728 on XP_846273 VSG (Establishment) [Trypanosoma brucei]
Length = 490
Score = 28.1 bits (61), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 26/57 (45%)
Query: 212 PGSSFLSRTIAHLKLNHNNSSKKGPGGLDWMLKDEGVREQLIPVIPEAFLDPEIQIN 268
P S F SRT+ + N SS G G+ L+ E + +I A+L+ + N
Sbjct: 145 PASKFTSRTLGGINANACCSSNNGEEGVKTDLEHEPKEPEPTKLITHAYLEAKCDSN 201
>M.Javanica_Scaff26700g092728 on XP_001349030 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 28.1 bits (61), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
Query: 100 KYLDGAEKIIEEVRKKGNKKLSDEHDDNIRKFATRTLLKTLIADRTFRRDLP-----HAT 154
K D KI E ++K+ N KL DD IR++ +T+ T DL HAT
Sbjct: 217 KLEDNLRKIFENIKKENNSKLKSLTDDQIREYWWTENRETVWKAMTCSEDLKNSSYFHAT 276
Query: 155 I--PKNNSEAQ 163
KN S+A+
Sbjct: 277 CIDGKNQSQAR 287
>M.Javanica_Scaff26700g092728 on XP_001609565 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1341
Score = 26.2 bits (56), Expect = 4.0, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 282 SPVKDKNEKKSKKEEEDESDETKISKIKY 310
+PV+DK +K + K E E +T S KY
Sbjct: 1014 NPVEDKEKKTNNKCEHTEDPKTSTSNDKY 1042
>M.Javanica_Scaff26700g092728 on XP_001349437 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2231
Score = 26.2 bits (56), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 103 DGAEKIIEEVRKKGNKKLSDEHDDNIRKF---ATR-TLLKTLIAD 143
D +KI E ++K+ N+KL DD IR++ A R T+ K + D
Sbjct: 215 DKLKKIFENIKKENNEKLKSLTDDQIREYWWTANRETVWKAITCD 259
>M.Javanica_Scaff26700g092728 on XP_805883 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1038
Score = 25.0 bits (53), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 24/90 (26%)
Query: 196 HAKNEEMIMAKSEGHSPGSSFLSRTIAHLKLNHNNSSKKGPGGLDWMLKDEGVREQLIPV 255
A N + ++A SE S GS+ +H KLN N+ K+G +D L+P
Sbjct: 717 QAANTDALVA-SESRSEGSA-----TSHEKLNENDPEKRGENSVD----------DLVPA 760
Query: 256 IPEAFL-------DPEIQINISKEESMSDE 278
P + + +P + I+ E S SD+
Sbjct: 761 APHSTVVAGSSVPEPATAMEIA-ENSRSDD 789
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7939g050058
(176 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_812243 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.1
XP_814156 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.7
XP_810023 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.0
XP_821703 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.1
XP_820757 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.3
XP_819733 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.7
XP_817994 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.9
XP_804821 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.0
XP_806966 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.0
XP_821991 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.3
XP_809607 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.3
XP_809902 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.7
XP_808719 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.8
XP_821388 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.8
XP_811704 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.8
XP_810610 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.8
XP_809850 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.9
XP_816177 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.3
XP_806668 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.3
XP_810389 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.3
XP_816558 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.7
XP_807358 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.8
XP_822026 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.0
XP_808182 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 6.3
XP_804820 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 7.3
XP_807444 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 7.5
XP_820393 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 7.6
XP_812044 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 9.3
XP_802330 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 9.4
AAK31237 variable surface protein 21e (Establishment) [Giardi... 23 10.0
>M.Javanica_Scaff7939g050058 on XP_812243 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 802
Score = 26.2 bits (56), Expect = 1.1, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 63 KKPKPTTPKKSKIIFLNLTNFLLISEPCCYSG 94
++ +P P S+ +F + FLL+ CC +G
Sbjct: 30 RESEPQRPNMSRRVFTSAVLFLLVVMMCCDTG 61
>M.Javanica_Scaff7939g050058 on XP_814156 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 759
Score = 25.8 bits (55), Expect = 1.7, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 63 KKPKPTTPKKSKIIFLNLTNFLLISEPCCYSGNRRSS 99
++ +P P S+ +F + LL+ CC SG S+
Sbjct: 30 RESEPQRPNMSRRVFTSAVLLLLVVMMCCGSGGAASA 66
>M.Javanica_Scaff7939g050058 on XP_810023 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 804
Score = 25.4 bits (54), Expect = 2.0, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 34/95 (35%), Gaps = 18/95 (18%)
Query: 71 KKSKIIFLNLTNFLLISEPCCYSGNRRSSCYYCRPPFQCYKGLYCQYLPPPTTTKKPTTT 130
+ +++ + +TN LL + P +SG + P+ ++P+
Sbjct: 657 RSREVVSVTVTNVLLYNRPLTFSGGNAE---------------VEEVTDSPSADQEPSAE 701
Query: 131 PKPPQPCNKYNHCPPGYKCQYKICVPIPTTTTKKP 165
P P N PP P+ TT ++P
Sbjct: 702 PASPFVARNQNAAPPA---TIPPEAPVGQTTLQQP 733
>M.Javanica_Scaff7939g050058 on XP_821703 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 912
Score = 25.4 bits (54), Expect = 2.1, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 63 KKPKPTTPKKSKIIFLNLTNFLLISEPCCYSG 94
++ +P PK S+ +F + LL+ CC G
Sbjct: 91 RESEPQRPKMSRRVFTSAVLLLLVVTMCCGRG 122
>M.Javanica_Scaff7939g050058 on XP_820757 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 912
Score = 25.4 bits (54), Expect = 2.3, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 63 KKPKPTTPKKSKIIFLNLTNFLLISEPCCYSGNRRSS 99
++ +P P S+ +F + LL+ CC +G SS
Sbjct: 30 RESEPQRPNMSRHLFYSAVLLLLVVMMCCGTGGAASS 66
>M.Javanica_Scaff7939g050058 on XP_819733 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 799
Score = 25.0 bits (53), Expect = 2.7, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 29 CGKYNPCLPGYKCEYGICVRDIPATTTKKPTTTTKKPKPT-TPK 71
CG+ NP + + + + P +T++ +KP PT TP+
Sbjct: 684 CGEENPSQESHVTVTNVFLYNRPLNSTERTAIQERKPIPTITPE 727
>M.Javanica_Scaff7939g050058 on XP_817994 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 954
Score = 25.0 bits (53), Expect = 2.9, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 63 KKPKPTTPKKSKIIFLNLTNFLLISEPCCYSGNRRSS 99
++ +P P S+ +F + LLI CC +G + +
Sbjct: 30 RESEPQRPNMSRRVFTSAVLLLLIMMMCCNAGGAQQT 66
>M.Javanica_Scaff7939g050058 on XP_804821 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 731
Score = 25.0 bits (53), Expect = 3.0, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 63 KKPKPTTPKKSKIIFLNLTNFLLISEPCCYSG 94
++ +P P S+ +F + LL+ CC SG
Sbjct: 31 RESEPQRPNMSRRVFTSAVLLLLVVMMCCGSG 62
>M.Javanica_Scaff7939g050058 on XP_806966 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 777
Score = 25.0 bits (53), Expect = 3.0, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 63 KKPKPTTPKKSKIIFLNLTNFLLISEPCCYSG 94
++ +P P S+ +F + LL+ CC SG
Sbjct: 31 RESEPQRPNMSRRVFTSAVLLLLVVMMCCGSG 62
>M.Javanica_Scaff7939g050058 on XP_821991 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 882
Score = 25.0 bits (53), Expect = 3.3, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 63 KKPKPTTPKKSKIIFLNLTNFLLISEPCCYSG 94
++ +P P S+ +F + LL+ CC SG
Sbjct: 30 RESEPQRPNMSRRVFASAVLLLLVVMMCCGSG 61
>M.Javanica_Scaff7939g050058 on XP_809607 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 920
Score = 25.0 bits (53), Expect = 3.3, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 63 KKPKPTTPKKSKIIFLNLTNFLLISEPCCYSG 94
++ +P P S+ +F + LL+ CC SG
Sbjct: 30 RESEPQRPNMSRRVFASAVLLLLVVMMCCGSG 61
>M.Javanica_Scaff7939g050058 on XP_809902 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 955
Score = 24.6 bits (52), Expect = 3.7, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 5 LLVFIQMCLIVEVLSDAKRPGP 26
LL+ + MC +V +DA PGP
Sbjct: 50 LLIVVMMCDTGDVEADAPAPGP 71
>M.Javanica_Scaff7939g050058 on XP_808719 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 779
Score = 24.6 bits (52), Expect = 3.8, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 70 PKKSKIIFLNLTNFLLISEPCCYSGNRRSS 99
P S+ +F + FLL+ CC +G SS
Sbjct: 37 PNMSRRVFTSAVLFLLVVMMCCGTGGAASS 66
>M.Javanica_Scaff7939g050058 on XP_821388 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 907
Score = 24.6 bits (52), Expect = 3.8, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 66 KPTTPKKSKIIFLNLTNFLLISEPCCYSG 94
+P P S+ +F + LL+ CC SG
Sbjct: 33 EPQRPNMSRRVFTSAVPLLLVVMMCCGSG 61
>M.Javanica_Scaff7939g050058 on XP_811704 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 745
Score = 24.6 bits (52), Expect = 3.8, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 63 KKPKPTTPKKSKIIFLNLTNFLLISEPCCYSG 94
++ +P P S+ +F + LL+ CC SG
Sbjct: 30 RESEPQRPNMSRPVFASAVLLLLVVMMCCGSG 61
>M.Javanica_Scaff7939g050058 on XP_810610 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 199
Score = 24.3 bits (51), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 63 KKPKPTTPKKSKIIFLNLTNFLLISEPCCYSGN 95
++ +P P S+ +F + LL+ CC SG
Sbjct: 30 RESEPQRPNMSRRVFTSAVLLLLVVMMCCGSGG 62
>M.Javanica_Scaff7939g050058 on XP_809850 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 915
Score = 24.6 bits (52), Expect = 3.9, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 67 PTTPKKSKIIFLNLTNFLLISEPCCYSGNRRSS 99
P P S+ +F + LL+ CC +G SS
Sbjct: 33 PQRPNMSRRVFTSAVLLLLVVMMCCGTGGAASS 65
>M.Javanica_Scaff7939g050058 on XP_816177 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 779
Score = 24.6 bits (52), Expect = 4.3, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 63 KKPKPTTPKKSKIIFLNLTNFLLISEPCCYSG 94
++ +P P S+ +F + LL+ CC +G
Sbjct: 30 RESEPQRPNMSRRVFTSAVPLLLVVMMCCGTG 61
>M.Javanica_Scaff7939g050058 on XP_806668 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 779
Score = 24.6 bits (52), Expect = 4.3, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 63 KKPKPTTPKKSKIIFLNLTNFLLISEPCCYSG 94
K+ +P P + +F++ LL+ CC SG
Sbjct: 30 KESEPQRPNMFRRVFISAVLLLLVVMMCCGSG 61
>M.Javanica_Scaff7939g050058 on XP_810389 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 754
Score = 24.6 bits (52), Expect = 4.3, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Query: 33 NPCLPGYKCEYGICVRDIPATTTKKPTTTTKKPKPTTPKKSKIIFL---NLTNFL 84
N GYK + + V D+ T+ KPT K + +P I NLT L
Sbjct: 215 NRTYSGYKTKLELVVGDVREPTSSKPTERIKWGQIRSPLNESTIAAHKGNLTRLL 269
>M.Javanica_Scaff7939g050058 on XP_816558 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 813
Score = 24.3 bits (51), Expect = 4.7, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 63 KKPKPTTPKKSKIIFLNLTNFLLISEPCCYSG 94
++ +P P S+ +F + LL+ CC SG
Sbjct: 30 RESEPQRPNMSRRMFTSAVLLLLVVMMCCGSG 61
>M.Javanica_Scaff7939g050058 on XP_807358 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 872
Score = 24.3 bits (51), Expect = 4.8, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 63 KKPKPTTPKKSKIIFLNLTNFLLISEPCCYSG 94
++ +P P S+ +F + LL+ CC SG
Sbjct: 96 RESEPQRPNMSRHVFTSAVLVLLVVMMCCGSG 127
>M.Javanica_Scaff7939g050058 on XP_822026 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 888
Score = 24.3 bits (51), Expect = 5.0, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 63 KKPKPTTPKKSKIIFLNLTNFLLISEPCCYSG 94
++ +P P S+ +F + LL+ CC +G
Sbjct: 30 RESEPQRPNMSRRVFASAVLLLLVVTMCCGTG 61
>M.Javanica_Scaff7939g050058 on XP_808182 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 918
Score = 23.9 bits (50), Expect = 6.3, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 66 KPTTPKKSKIIFLNLTNFLLISEPCCYSG 94
+P P S+ +F + LL+ CC SG
Sbjct: 33 EPQRPNMSRRVFASAVLLLLVVMMCCGSG 61
>M.Javanica_Scaff7939g050058 on XP_804820 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 954
Score = 23.9 bits (50), Expect = 7.3, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 11/61 (18%)
Query: 63 KKPKPTTPKKSKIIFLNLTNFLLISEPCCYSGNRRSSCYYCRPPFQCYKGLYCQYLPPPT 122
++ +P P S+ F + LL+ CC +G SS P Q +PPP
Sbjct: 30 RESEPQRPHMSRHHFCSAVLLLLVMMMCCGTGGAASSG--VTAPAQ---------IPPPK 78
Query: 123 T 123
T
Sbjct: 79 T 79
>M.Javanica_Scaff7939g050058 on XP_807444 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 777
Score = 23.9 bits (50), Expect = 7.5, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 63 KKPKPTTPKKSKIIFLNLTNFLLISEPCCYSG 94
++ +P P S+ +F + LL+ CC +G
Sbjct: 31 RESEPQRPNMSRHLFCSAVLLLLVVMMCCNTG 62
>M.Javanica_Scaff7939g050058 on XP_820393 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 836
Score = 23.9 bits (50), Expect = 7.6, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 63 KKPKPTTPKKSKIIFLNLTNFLLISEPCCYSG 94
++ +P P S+ +F + LL+ CC +G
Sbjct: 91 RESEPERPNMSRRVFASAVLLLLVVMMCCGTG 122
>M.Javanica_Scaff7939g050058 on XP_812044 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 855
Score = 23.5 bits (49), Expect = 9.3, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 63 KKPKPTTPKKSKIIFLNLTNFLLISEPCC 91
++ +P PK S+ +F + LL+ CC
Sbjct: 30 RESEPQRPKMSRRVFTSAVLLLLVVMICC 58
>M.Javanica_Scaff7939g050058 on XP_802330 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 84
Score = 22.3 bits (46), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 63 KKPKPTTPKKSKIIFLNLTNFLLISEPCCYSG 94
++ +P P S+ +F + LL+ CC +G
Sbjct: 31 RESEPQRPNMSRHLFCSAVLLLLVVMMCCNTG 62
>M.Javanica_Scaff7939g050058 on AAK31237 variable surface protein 21e (Establishment) [Giardia
duodenalis]
Length = 132
Score = 22.7 bits (47), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 139 KYNHCPPGYKCQYKICVPIPT 159
K + C GYK + + CVP T
Sbjct: 86 KCSECASGYKLEGEACVPAST 106
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7817g049595
(519 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349514 PfEMP1 (Establishment) [Plasmodium falciparum] 28 1.2
XP_818232 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 3.1
XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum] 27 4.7
>M.Javanica_Scaff7817g049595 on XP_001349514 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2120
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 17/114 (14%)
Query: 127 KFVKYYDNVRNASLRKNKSTGENS----QGTRSLEEHIP--GLRRTNSESA----IDTSN 176
+++++++ RK K EN+ +G E++ G T + S + N
Sbjct: 310 QYLRWFEEWAEDFCRKRKYKLENAIEKCRGKTKGEKYCDLNGFDCTQTASGEKKFVKGHN 369
Query: 177 RFNCSPSCMPFG-------ENYLFRRGKSRLSITEKNTSSASTENEEAINYVEE 223
NCS +C+PFG + +L +R K + I+ + ST N Y EE
Sbjct: 370 CHNCSVTCIPFGPWIDNQKKEFLKQRNKYQNEISSNSRKKRSTSNNNYKGYDEE 423
>M.Javanica_Scaff7817g049595 on XP_818232 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 933
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 8/78 (10%)
Query: 160 IPGLRRTNSESAIDTSNRFNCSPS-CMPFGENYLFRRGKSRLSITEKNTSSASTENEEAI 218
IPGL + S+ F + + C GE+ L+I + NT + + I
Sbjct: 94 IPGLLKVGSDV-------FAVAEAQCKKDGEDTFTGIASQLLTIKDDNTPEEALKKARVI 146
Query: 219 NYVEENNPPPRLIIASRP 236
+EE P + + SRP
Sbjct: 147 QVLEEGASPSKKVDVSRP 164
>M.Javanica_Scaff7817g049595 on XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2178
Score = 26.6 bits (57), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 16/83 (19%)
Query: 255 LDESSSFDESTSANPHFDTSSEEISK-PQDLNIGSSSKP---PLEKIKSLPTNEGNMDID 310
L E D STS N H D S ++S P D NI S P P K+ +P+
Sbjct: 2004 LKEEWENDTSTSGNKHSDIPSGKLSDTPSDNNIHSDIHPSDIPSGKLSDIPS-------- 2055
Query: 311 LILKNRSLKEGNKKLSLDLSEQI 333
+ ++ NK L+ D+S QI
Sbjct: 2056 ----DNNIPSSNKTLNTDVSIQI 2074
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff666g008712
(110 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2566g023803
(64 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2994g026507
(104 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_809476 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.43
XP_810562 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 7.4
>M.Javanica_Scaff2994g026507 on XP_809476 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 73
Score = 25.0 bits (53), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 49 CGAFLLEQLDNYLELTGIYGS 69
CG L + D++L L G Y S
Sbjct: 48 CGPLLRNRSDDFLPLAGTYAS 68
>M.Javanica_Scaff2994g026507 on XP_810562 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 874
Score = 22.7 bits (47), Expect = 7.4, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Query: 49 CGAFLLEQLDNYLELTGIYGSVMELKYTTESLGLIGEGQTNNA 91
CGA QLD++ L G GS +E+K T + G + +A
Sbjct: 226 CGA----QLDSWTRLIGSGGSGVEMKDETLVFPVEGTKKAEDA 264
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff714g009190
(95 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_819383 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.1
>M.Javanica_Scaff714g009190 on XP_819383 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 753
Score = 22.7 bits (47), Expect = 5.1, Method: Composition-based stats.
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 4 IYDWLSKQNYSFGIGEF 20
+Y W++ N SF +G F
Sbjct: 427 LYLWVTDNNRSFSVGPF 443
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff25420g090872
(73 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff8318g051527
(68 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_827755 VSG (Establishment) [Trypanosoma brucei] 25 0.57
XP_810753 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.1
>M.Javanica_Scaff8318g051527 on XP_827755 VSG (Establishment) [Trypanosoma brucei]
Length = 510
Score = 24.6 bits (52), Expect = 0.57, Method: Composition-based stats.
Identities = 9/17 (52%), Positives = 14/17 (82%)
Query: 16 RMSTSKAKKQSRKCKLT 32
RM+ +KA++Q +KC LT
Sbjct: 92 RMAAAKAQEQGQKCLLT 108
>M.Javanica_Scaff8318g051527 on XP_810753 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 955
Score = 23.1 bits (48), Expect = 2.1, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 2 IFHLIFSIMLHIAARMSTSKAKKQSRKCKLTLKNS 36
+FHL I H + ++ + R C++ NS
Sbjct: 15 LFHLSIHIFCHFFSTITRRRKTNAKRYCEILRTNS 49
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6610g044700
(101 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_843642 VSG (Establishment) [Trypanosoma brucei] 26 0.41
>M.Javanica_Scaff6610g044700 on XP_843642 VSG (Establishment) [Trypanosoma brucei]
Length = 534
Score = 26.2 bits (56), Expect = 0.41, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 10 FTTKVKSTVDDVVSTVDVVNVVSTQ-LTSSMSCRHNRRRQCRVDTIDVVNVVSTQSTSS 67
TT++K +DD+ +TVD+ + Q T++ + + N+ + D V VV ++
Sbjct: 138 LTTQIKKVIDDIQATVDITQKIKVQEHTNTANSKMNKAVYGTDEPNDSVRVVDAAGATT 196
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff26324g092202
(110 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_810237 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.6
XP_001610714 variant erythrocyte surface antigen-1, alpha subun... 23 4.0
XP_965997 PfEMP1 (Establishment) [Plasmodium falciparum] 23 7.0
>M.Javanica_Scaff26324g092202 on XP_810237 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 922
Score = 23.9 bits (50), Expect = 2.6, Method: Composition-based stats.
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 80 KDTEYVEGRCCKEKEQKQFQSTSKNEI 106
+ T YV+G E Q + ++T NEI
Sbjct: 651 QSTAYVDGERVGEDAQCELETTESNEI 677
>M.Javanica_Scaff26324g092202 on XP_001610714 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1231
Score = 23.5 bits (49), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 54 NHCCDKSPCPQ-NTTDVGRGMDGHCDGKDTEYVEG-RCCKEKEQKQFQSTSKNEIEMR 109
N CDK C + N TD + +GH G+ + EG +C +K ++S N + R
Sbjct: 140 NTPCDKCKCMKWNVTDADKEHNGHHLGRGCQKCEGDKCTHSCYKKSYKSAYSNNNDSR 197
>M.Javanica_Scaff26324g092202 on XP_965997 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2879
Score = 22.7 bits (47), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 9/14 (64%), Positives = 9/14 (64%)
Query: 52 INNHCCDKSPCPQN 65
I NH DK P PQN
Sbjct: 2079 ITNHPLDKCPTPQN 2092
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4408g034463
(76 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_820183 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.2
>M.Javanica_Scaff4408g034463 on XP_820183 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 721
Score = 23.1 bits (48), Expect = 2.2, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 26 PNCSSNILRFYLLVFVSSQNFLSLNASPSMRN 57
PN S ++ F +L+ V++ + A+P+ N
Sbjct: 37 PNMSRHLFNFAILLLVTTMCCATCGATPAKEN 68
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff654g008576
(139 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAF14193 SBP3 (Others) [Babesia bovis] 26 1.0
XP_001609539 variant erythrocyte surface antigen-1, beta subuni... 24 5.2
>M.Javanica_Scaff654g008576 on AAF14193 SBP3 (Others) [Babesia bovis]
Length = 1089
Score = 25.8 bits (55), Expect = 1.0, Method: Composition-based stats.
Identities = 7/9 (77%), Positives = 7/9 (77%)
Query: 55 CPCCCKCCC 63
CPC CKC C
Sbjct: 652 CPCKCKCTC 660
Score = 24.3 bits (51), Expect = 3.6, Method: Composition-based stats.
Identities = 7/11 (63%), Positives = 7/11 (63%)
Query: 55 CPCCCKCCCPC 65
C C CKC C C
Sbjct: 650 CHCPCKCKCTC 660
>M.Javanica_Scaff654g008576 on XP_001609539 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 884
Score = 23.9 bits (50), Expect = 5.2, Method: Composition-based stats.
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 25 GCGCCCHCCKCCSCCTPC 42
G GCC + K C CT C
Sbjct: 166 GVGCCGNSGKTCHDCTEC 183
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3773g031111
(65 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_818480 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 2.9
XP_845136 VSG (Establishment) [Trypanosoma brucei] 22 5.3
AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum] 22 6.4
AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum] 22 6.6
>M.Javanica_Scaff3773g031111 on XP_818480 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 926
Score = 22.3 bits (46), Expect = 2.9, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 19/40 (47%)
Query: 7 IINLTSGLFLGGARATKYETRDSRDTRFSKKYENEIKRDT 46
+I L SG++ GG++ + D R + ++ DT
Sbjct: 783 VIQLPSGIYSGGSKHVDVASSSDGDPRVGSEAGGAMQGDT 822
>M.Javanica_Scaff3773g031111 on XP_845136 VSG (Establishment) [Trypanosoma brucei]
Length = 481
Score = 21.6 bits (44), Expect = 5.3, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 22 TKYETRDSRDTRFSKKYENEIKRDTRSLKKYKISRDT 58
T+ + +D DT F K N + + +++Y + +DT
Sbjct: 310 TEKQLQDQIDTVFGKDPANFTNNNWKLVEEYTLPKDT 346
>M.Javanica_Scaff3773g031111 on AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2969
Score = 21.6 bits (44), Expect = 6.4, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 31 DTRFSKKYENEIKRDTRSLKKYKI 54
D ++Y N +K + LKKYKI
Sbjct: 2065 DYNLLQQYLNYMKNEMEQLKKYKI 2088
>M.Javanica_Scaff3773g031111 on AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2965
Score = 21.6 bits (44), Expect = 6.6, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 31 DTRFSKKYENEIKRDTRSLKKYKI 54
D ++Y N +K + LKKYKI
Sbjct: 2069 DYNLLQQYLNYMKNEMEQLKKYKI 2092
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5973g041900
(155 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001611900 variant erythrocyte surface antigen-1, alpha subun... 26 0.93
XP_001609450 variant erythrocyte surface antigen-1, alpha subun... 26 1.4
XP_001609163 variant erythrocyte surface antigen-1, alpha subun... 25 2.1
XP_001611901 variant erythrocyte surface antigen-1, alpha subun... 24 5.1
XP_814927 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 6.5
>M.Javanica_Scaff5973g041900 on XP_001611900 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1226
Score = 26.2 bits (56), Expect = 0.93, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 24 CGNCGCYKGNTTLEDDNNAG 43
CG CGC K + + DD+ G
Sbjct: 159 CGTCGCMKWDVAVADDDKNG 178
>M.Javanica_Scaff5973g041900 on XP_001609450 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1309
Score = 25.8 bits (55), Expect = 1.4, Method: Composition-based stats.
Identities = 10/20 (50%), Positives = 11/20 (55%)
Query: 24 CGNCGCYKGNTTLEDDNNAG 43
C +CGC K N DDN G
Sbjct: 162 CDSCGCMKWNVPEADDNKNG 181
>M.Javanica_Scaff5973g041900 on XP_001609163 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1360
Score = 25.4 bits (54), Expect = 2.1, Method: Composition-based stats.
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 24 CGNCGCYKGNTTLEDD 39
CG+CGC K N T D+
Sbjct: 160 CGDCGCMKWNVTNADN 175
>M.Javanica_Scaff5973g041900 on XP_001611901 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1211
Score = 23.9 bits (50), Expect = 5.1, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 23 NCGNCGCYKGNTTLEDDNNAG 43
+C CGC K + + DD+ G
Sbjct: 164 SCDTCGCMKWDVAVADDDKNG 184
>M.Javanica_Scaff5973g041900 on XP_814927 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 759
Score = 23.9 bits (50), Expect = 6.5, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Query: 86 VEEGHEEEEDGDEEEEEDGDEEGNEEEEEEEEEDLGLGQALDNFEEGLDEI 136
VE+ E+ E+++E GD E +E + E++ G + EG+ +
Sbjct: 697 VEDKKEKGSGDSEDKKESGDSEDKKESGDSEDKK---GSGDGSMREGMSRV 744
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4815g036457
(123 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001611901 variant erythrocyte surface antigen-1, alpha subun... 24 2.8
XP_001611147 variant erythrocyte surface antigen-1, alpha subun... 24 3.2
XP_827743 VSG (Establishment) [Trypanosoma brucei] 24 3.2
XP_966160 PfEMP1 (Establishment) [Plasmodium falciparum] 23 6.2
XP_815748 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 6.8
XP_001611900 variant erythrocyte surface antigen-1, alpha subun... 23 8.3
XP_001609533 variant erythrocyte surface antigen-1, alpha subun... 23 9.4
>M.Javanica_Scaff4815g036457 on XP_001611901 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1211
Score = 24.3 bits (51), Expect = 2.8, Method: Composition-based stats.
Identities = 10/15 (66%), Positives = 10/15 (66%)
Query: 51 GCGCDCCCGGGSDST 65
G GC C GGGSD T
Sbjct: 188 GRGCTRCSGGGSDCT 202
>M.Javanica_Scaff4815g036457 on XP_001611147 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1304
Score = 24.3 bits (51), Expect = 3.2, Method: Composition-based stats.
Identities = 11/20 (55%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Query: 48 NTGGCGCDCCC-GGGSDSTA 66
++GG +C C GGGSD TA
Sbjct: 180 DSGGSEHNCSCSGGGSDCTA 199
>M.Javanica_Scaff4815g036457 on XP_827743 VSG (Establishment) [Trypanosoma brucei]
Length = 503
Score = 23.9 bits (50), Expect = 3.2, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 29 CCCNNTTQMMNVSGTMVPMNTGGCG 53
C C TQ+ + + T P++TG G
Sbjct: 225 CICAGQTQLTSKACTTTPLSTGWTG 249
>M.Javanica_Scaff4815g036457 on XP_966160 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2394
Score = 23.1 bits (48), Expect = 6.2, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 88 QKNISVEANQDTPTRNMTEINRGKKQFLRKFPNF 121
+K IS +++DT ++ +R KK L+K NF
Sbjct: 487 KKEISF-SDKDTTDISILSTDRAKKNILQKLENF 519
>M.Javanica_Scaff4815g036457 on XP_815748 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 530
Score = 23.1 bits (48), Expect = 6.8, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 47 MNTGGCGCDCCCGGGSDSTALLLALLGKKRR 77
M+ GGCG G D ++ A +RR
Sbjct: 155 MSDGGCGVPSVVGWEKDKLMMMTACADGRRR 185
>M.Javanica_Scaff4815g036457 on XP_001611900 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1226
Score = 22.7 bits (47), Expect = 8.3, Method: Composition-based stats.
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 53 GCDCCCGGGSDST 65
GC C GGGSD +
Sbjct: 194 GCKCSPGGGSDCS 206
>M.Javanica_Scaff4815g036457 on XP_001609533 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1162
Score = 22.7 bits (47), Expect = 9.4, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 20/51 (39%), Gaps = 11/51 (21%)
Query: 25 CCDCCCCNNTTQMMNVSGTMVPM---------NTGGCGCDCCCGGGSDSTA 66
C DC C + GT P+ ++G C+C GGG TA
Sbjct: 116 CKDCQCMKWSVTRPESEGT--PLGRKCTRCSDSSGSDACNCSPGGGDSCTA 164
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5744g040836
(249 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001348249 Plasmepsin I (Proteases) [Plasmodium falciparum] 31 0.046
XP_815511 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.5
ABB59591 CSP (Invasion) [Plasmodium falciparum] 24 4.2
ABB59607 CSP (Invasion) [Plasmodium falciparum] 23 4.7
ABB59603 CSP (Invasion) [Plasmodium falciparum] 23 6.1
ABB59597 CSP (Invasion) [Plasmodium falciparum] 23 6.7
XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum] 25 7.5
ABB59605 CSP (Invasion) [Plasmodium falciparum] 23 7.5
ABB59590 CSP (Invasion) [Plasmodium falciparum] 23 9.0
>M.Javanica_Scaff5744g040836 on XP_001348249 Plasmepsin I (Proteases) [Plasmodium falciparum]
Length = 452
Score = 31.2 bits (69), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 3 LDRILIILIFNAILWSLINSV--KDNKQQNRVEETSKDLIKGDRAESSVKTQIQKYDENT 60
L +LI A+ + LI++V NK+ N + TSK +I G E+S ++ ++
Sbjct: 41 LYVFFFLLITGALFYYLIDNVLFPKNKKINEIMNTSKHVIIGFSIENSHDRIMKTVKQHR 100
Query: 61 RKNTTKDTEKKLKKSECMKIHYQN 84
KN K++ K K K H N
Sbjct: 101 LKNYIKESLKFFKTGLTQKPHLGN 124
>M.Javanica_Scaff5744g040836 on XP_815511 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 848
Score = 25.4 bits (54), Expect = 3.5, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 134 NRKYREKRKNKKADLQNVQADNGETSFVNTQNVDFGNKDKL--PIVYEEGNRSEEENLSN 191
++K + N+K +L DN T V+ V ++D ++Y+ GN +EE ++
Sbjct: 404 SKKEKNGNNNRKGELHLWLTDN--THIVDIGPVSEEDEDAAASSLLYKSGNNKKEELIAL 461
Query: 192 HDDEEGSENET 202
++ ++G E+ T
Sbjct: 462 YEKKKGGEDTT 472
>M.Javanica_Scaff5744g040836 on ABB59591 CSP (Invasion) [Plasmodium falciparum]
Length = 77
Score = 23.9 bits (50), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 191 NHDDEEGSENETETYVEEQNQQVVEEPNKIPENCMNQINLNEYPFDLNEKPKDE 244
N+++EE S+ E Y+++ + E + C N I + P N KPKDE
Sbjct: 2 NNNNEEPSDKHIEQYLKKMQNSLSTEWSPCSVTCGNGIQVRIKPGSAN-KPKDE 54
>M.Javanica_Scaff5744g040836 on ABB59607 CSP (Invasion) [Plasmodium falciparum]
Length = 77
Score = 23.5 bits (49), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 191 NHDDEEGSENETETYVEEQNQQVVEEPNKIPENCMNQINLNEYPFDLNEKPKDE 244
N+++EE S+ E Y+ + + E + C N I + P N KPKDE
Sbjct: 2 NNNNEEPSDKHIEQYLRKMQNSLSTEWSPCSVTCGNGIQVRIKPGSAN-KPKDE 54
>M.Javanica_Scaff5744g040836 on ABB59603 CSP (Invasion) [Plasmodium falciparum]
Length = 77
Score = 23.1 bits (48), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 191 NHDDEEGSENETETYVEEQNQQVVEEPNKIPENCMNQINLNEYPFDLNEKPKDE 244
N+++EE S+ E Y++E + E + C N I + P N KPKD+
Sbjct: 2 NNNNEEPSDKHIEKYLKEIQNSLSTEWSPCSVTCGNGIQVRIKPGSAN-KPKDQ 54
>M.Javanica_Scaff5744g040836 on ABB59597 CSP (Invasion) [Plasmodium falciparum]
Length = 77
Score = 23.1 bits (48), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 191 NHDDEEGSENETETYVEEQNQQVVEEPNKIPENCMNQINLNEYPFDLNEKPKDE 244
N+++EE S+ E Y++E + E + C N I + P N KPKD+
Sbjct: 2 NNNNEEPSDKHIEQYLKEIQNSLSTEWSPCSVTCGNGIQVRIKPGSAN-KPKDQ 54
>M.Javanica_Scaff5744g040836 on XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2178
Score = 24.6 bits (52), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 167 DFGNKDKLPIVYEEGNRSEEENLSNHDDEEGSENETETYVEEQNQQVVEE 216
D G D L + +G E++++S+ D+EE +N E EE+ Q+VV++
Sbjct: 764 DTGTDDNLEDIDSDG--EEDDDVSHVDEEEPEDNPVEGSSEEEKQEVVKD 811
>M.Javanica_Scaff5744g040836 on ABB59605 CSP (Invasion) [Plasmodium falciparum]
Length = 77
Score = 23.1 bits (48), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 191 NHDDEEGSENETETYVEEQNQQVVEEPNKIPENCMNQINLNEYPFDLNEKPKDE 244
N+++EE S+ E Y++ + E + C N I + P N KPKDE
Sbjct: 2 NNNNEEPSDKHIEQYLKNMQNSLSTEWSPCSVTCGNGIQVRIKPGSAN-KPKDE 54
>M.Javanica_Scaff5744g040836 on ABB59590 CSP (Invasion) [Plasmodium falciparum]
Length = 77
Score = 22.7 bits (47), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 191 NHDDEEGSENETETYVEEQNQQVVEEPNKIPENCMNQINLNEYPFDLNEKPKDE 244
N+++EE S+ E Y+++ + E + C N I + P N KPKDE
Sbjct: 2 NNNNEEPSDKHIEQYLKKIQNSLSTEWSPCSVTCGNGIQVRIKPGSAN-KPKDE 54
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff529g007255
(131 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_845142 VSG (Establishment) [Trypanosoma brucei] 26 1.0
XP_817721 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.3
XP_804407 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.3
XP_804142 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.3
XP_001610720 variant erythrocyte surface antigen-1, beta subuni... 23 5.3
>M.Javanica_Scaff529g007255 on XP_845142 VSG (Establishment) [Trypanosoma brucei]
Length = 481
Score = 25.8 bits (55), Expect = 1.0, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 16/40 (40%), Gaps = 5/40 (12%)
Query: 64 NDGDKTCNVKNDQSTECCFGRICSFQTKKCVTCLPENENC 103
N D+ CN D TEC C+F K P + C
Sbjct: 395 NKADEECNKAGDDKTECGKKTGCTFDENK-----PAGQKC 429
>M.Javanica_Scaff529g007255 on XP_817721 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 922
Score = 23.9 bits (50), Expect = 4.3, Method: Composition-based stats.
Identities = 8/14 (57%), Positives = 12/14 (85%)
Query: 66 GDKTCNVKNDQSTE 79
GD+TC++KN +S E
Sbjct: 663 GDETCSLKNTESKE 676
>M.Javanica_Scaff529g007255 on XP_804407 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 928
Score = 23.9 bits (50), Expect = 4.3, Method: Composition-based stats.
Identities = 8/14 (57%), Positives = 12/14 (85%)
Query: 66 GDKTCNVKNDQSTE 79
GD+TC++KN +S E
Sbjct: 667 GDETCSLKNTESKE 680
>M.Javanica_Scaff529g007255 on XP_804142 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 928
Score = 23.9 bits (50), Expect = 4.3, Method: Composition-based stats.
Identities = 8/14 (57%), Positives = 12/14 (85%)
Query: 66 GDKTCNVKNDQSTE 79
GD+TC++KN +S E
Sbjct: 667 GDETCSLKNTESKE 680
>M.Javanica_Scaff529g007255 on XP_001610720 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1102
Score = 23.5 bits (49), Expect = 5.3, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 18/39 (46%)
Query: 44 GTNCKTEGNGLSICRPYGCINDGDKTCNVKNDQSTECCF 82
G C G+G++ C P G C K ++T+ C+
Sbjct: 160 GRKCDCNGSGVNCCSPGGKKCHDCTECGPKATEATKKCY 198
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2701g024683
(173 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_805061 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.3
XP_802401 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.3
>M.Javanica_Scaff2701g024683 on XP_805061 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 920
Score = 25.4 bits (54), Expect = 2.3, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 2/92 (2%)
Query: 48 ERFDLKLTETFSSYLNESGFPKTKVFFGKTDGYDVYHFNENVTVEEHLIVSSEYKLQISI 107
+R ++ E+FS NES F + Y V F TVE H S++ K +SI
Sbjct: 37 KRIIFQVNESFSDSENESLVQAFHSFRAPSLAY-VSGFVV-ATVEAHYTNSTDQKSCVSI 94
Query: 108 SGHDIIEPIMVENNSIVYVVLHKDIAKYKILT 139
+ +I N V H D+ ++L+
Sbjct: 95 AAKSMISSGGTWTNGTAIVFDHYDVKIDRLLS 126
>M.Javanica_Scaff2701g024683 on XP_802401 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 137
Score = 23.9 bits (50), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 2/99 (2%)
Query: 43 TDETKERFDLKLTETFSSYLNESGFPKTKVFFGKTDGYDVYHFNENVTVEEHLIVSSEYK 102
+ +R ++ E+FS NES F + Y V F TVE H S++ K
Sbjct: 29 ASNSGKRIIFQVNESFSDSWNESLVQAFHSFRAPSLAY-VSGFVV-ATVEAHYKNSTDQK 86
Query: 103 LQISISGHDIIEPIMVENNSIVYVVLHKDIAKYKILTKI 141
+SI+ +I N V H D+ ++L+ +
Sbjct: 87 SCVSIAAKSMISSGGTWTNGTAVVFDHYDVKIDRLLSPL 125
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4673g035792
(616 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAE53332 SuAT1 (Establishment) [Theileria annulata] 30 0.45
>M.Javanica_Scaff4673g035792 on CAE53332 SuAT1 (Establishment) [Theileria annulata]
Length = 558
Score = 30.0 bits (66), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 7/100 (7%)
Query: 121 EAELSVELLILKSAESSNEFLLCKKIKHKKGKHPHHHHNHKGTKKPKKPKKGKTTTAKLK 180
E+E+S L+ S ESS + K K + + P T+K KPK+ + KLK
Sbjct: 369 ESEISDIELLFSSDESSQQTEKIAKPKKPRIRRPRKQKPESETEKVGKPKRKRGRPRKLK 428
Query: 181 KN---TSVTKKARPCRAILILELIRIKILRLNIHQQLLFD 217
+ K+ARP + + + + +H+Q+ D
Sbjct: 429 PDEVEEPKRKRARPKKH----KADELDTDHIEVHKQVRID 464
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff346g005172
(138 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_805061 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.99
XP_820473 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.2
>M.Javanica_Scaff346g005172 on XP_805061 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 920
Score = 25.8 bits (55), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Query: 64 KHRIAYIIRSYTSRGIYEQRRQSFTEQFFGSSMPGRLRSNSTTT----EYEGQEATFKK 118
K R AYI R Y R ++ +S + + G L + ST + EY G AT K
Sbjct: 439 KERDAYIAREYGCRNEWKNYWRSDCHEALTKGLFGFLSNTSTESTWADEYLGVNATVNK 497
>M.Javanica_Scaff346g005172 on XP_820473 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 846
Score = 23.9 bits (50), Expect = 5.2, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 16 VQKESMNTWRPFLIGNRMRTTSEDSAESFDAYDKSFDAYDIGH 58
VQK++ + W + G R+ T E+ A+ D+ F ++ I H
Sbjct: 613 VQKDNDDEWFVYANGRRIYETEEEMAQ--DSNADQFGSHRISH 653
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff29399g096292
(89 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_818883 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.0
XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum] 22 9.4
>M.Javanica_Scaff29399g096292 on XP_818883 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 980
Score = 23.9 bits (50), Expect = 2.0, Method: Composition-based stats.
Identities = 7/21 (33%), Positives = 15/21 (71%)
Query: 27 ENVLAYVDDILIYTKSENFDE 47
+ ++ YVD ++IY E+++E
Sbjct: 647 DGLMVYVDGLVIYDSEEDYEE 667
>M.Javanica_Scaff29399g096292 on XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum]
Length = 3130
Score = 21.9 bits (45), Expect = 9.4, Method: Composition-based stats.
Identities = 9/28 (32%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Query: 32 YVDDILIYTKSENFDEHLTALRSVFERF 59
Y++D Y +ENF++H L ++ F
Sbjct: 1760 YIND---YNINENFEKHQNILNEIYNGF 1784
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3224g027917
(50 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_815706 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.048
XP_815707 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.048
XP_810753 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.27
XP_821548 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.27
XP_804320 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 0.52
XP_809607 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 0.79
XP_809850 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.2
XP_810953 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 1.5
>M.Javanica_Scaff3224g027917 on XP_815706 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 907
Score = 26.6 bits (57), Expect = 0.048, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 9/34 (26%)
Query: 25 RLPQPYHCKGRIGI---------GMSDHTMIYPI 49
RLP PY G IG M+D T+++P+
Sbjct: 229 RLPYPYKSDGLIGFLNDASTPITKMTDGTLVFPV 262
>M.Javanica_Scaff3224g027917 on XP_815707 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 907
Score = 26.6 bits (57), Expect = 0.048, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 9/34 (26%)
Query: 25 RLPQPYHCKGRIGI---------GMSDHTMIYPI 49
RLP PY G IG M+D T+++P+
Sbjct: 229 RLPYPYKSDGLIGFLNDASTPITKMTDGTLVFPV 262
>M.Javanica_Scaff3224g027917 on XP_810753 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 955
Score = 24.6 bits (52), Expect = 0.27, Method: Composition-based stats.
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 34 GRIGIGMSDHTMIYPI 49
G G+ M DHT+++P+
Sbjct: 303 GGSGVEMKDHTLVFPV 318
>M.Javanica_Scaff3224g027917 on XP_821548 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 958
Score = 24.6 bits (52), Expect = 0.27, Method: Composition-based stats.
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 34 GRIGIGMSDHTMIYPI 49
G G+ M DHT+++P+
Sbjct: 306 GGSGVEMKDHTLVFPV 321
>M.Javanica_Scaff3224g027917 on XP_804320 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 309
Score = 23.9 bits (50), Expect = 0.52, Method: Composition-based stats.
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 34 GRIGIGMSDHTMIYPI 49
GR G+ M D T+++P+
Sbjct: 260 GRSGVRMKDGTLVFPV 275
>M.Javanica_Scaff3224g027917 on XP_809607 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 920
Score = 23.1 bits (48), Expect = 0.79, Method: Composition-based stats.
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 34 GRIGIGMSDHTMIYPI 49
G +G+ M D T+++P+
Sbjct: 241 GGLGVKMEDETLVFPV 256
>M.Javanica_Scaff3224g027917 on XP_809850 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 915
Score = 22.7 bits (47), Expect = 1.2, Method: Composition-based stats.
Identities = 6/16 (37%), Positives = 13/16 (81%)
Query: 34 GRIGIGMSDHTMIYPI 49
G +G+ M+D T+++P+
Sbjct: 260 GGLGVKMNDGTLVFPV 275
>M.Javanica_Scaff3224g027917 on XP_810953 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 958
Score = 22.3 bits (46), Expect = 1.5, Method: Composition-based stats.
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 34 GRIGIGMSDHTMIYPI 49
G +G+ M D T+++P+
Sbjct: 262 GGLGVKMHDDTLVFPV 277
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5694g040603
(121 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001608796 variant erythrocyte surface antigen-1, alpha subun... 24 2.6
XP_001350415 PfEMP1 (Establishment) [Plasmodium falciparum] 24 3.1
AAA29538 CSP (Invasion) [Plasmodium falciparum] 24 3.1
AAN87615 CSP (Invasion) [Plasmodium falciparum] 23 6.1
AAW78216 CSP (Invasion) [Plasmodium falciparum] 23 6.6
AAN87600 CSP (Invasion) [Plasmodium falciparum] 23 6.8
AAN87597 CSP (Invasion) [Plasmodium falciparum] 23 6.9
AAN87596 CSP (Invasion) [Plasmodium falciparum] 23 7.1
AAG37074 CSP (Invasion) [Plasmodium falciparum] 23 7.2
AAA29552 CSP (Invasion) [Plasmodium falciparum] 23 7.4
BAD73952 CSP (Invasion) [Plasmodium falciparum] 23 7.9
BAD73956 CSP (Invasion) [Plasmodium falciparum] 23 8.1
AAA29551 CSP (Invasion) [Plasmodium falciparum] 23 8.1
AAA29554 CSP (Invasion) [Plasmodium falciparum] 23 8.4
AAA29550 CSP (Invasion) [Plasmodium falciparum] 23 8.5
AAA29569 CSP (Invasion) [Plasmodium falciparum] 23 8.6
AAW78186 CSP (Invasion) [Plasmodium falciparum] 23 8.7
BAD73953 CSP (Invasion) [Plasmodium falciparum] 23 8.8
AAA29545 CSP (Invasion) [Plasmodium falciparum] 23 8.8
AAN87619 CSP (Invasion) [Plasmodium falciparum] 23 9.0
AAN87581 CSP (Invasion) [Plasmodium falciparum] 23 9.0
ABF83989 CSP (Invasion) [Plasmodium falciparum] 23 9.0
AAW78188 CSP (Invasion) [Plasmodium falciparum] 23 9.1
ABF83997 CSP (Invasion) [Plasmodium falciparum] 23 9.1
ABF84005 CSP (Invasion) [Plasmodium falciparum] 23 9.1
ABF83990 CSP (Invasion) [Plasmodium falciparum] 23 9.1
AAA29574 CSP (Invasion) [Plasmodium falciparum] 23 9.1
AAN87616 CSP (Invasion) [Plasmodium falciparum] 23 9.1
AAN87617 CSP (Invasion) [Plasmodium falciparum] 23 9.1
AAA29576 CSP (Invasion) [Plasmodium falciparum] 23 9.2
AAN87613 CSP (Invasion) [Plasmodium falciparum] 23 9.2
AAN87598 CSP (Invasion) [Plasmodium falciparum] 23 9.3
AAN87621 CSP (Invasion) [Plasmodium falciparum] 23 9.5
AAW78211 CSP (Invasion) [Plasmodium falciparum] 22 9.7
AAW78202 CSP (Invasion) [Plasmodium falciparum] 22 9.7
AAW78189 CSP (Invasion) [Plasmodium falciparum] 22 9.7
AAW78219 CSP (Invasion) [Plasmodium falciparum] 22 9.7
ABF83995 CSP (Invasion) [Plasmodium falciparum] 22 9.8
AAW78179 CSP (Invasion) [Plasmodium falciparum] 22 9.8
AAW78214 CSP (Invasion) [Plasmodium falciparum] 22 9.8
AAW78193 CSP (Invasion) [Plasmodium falciparum] 22 9.8
AAW78195 CSP (Invasion) [Plasmodium falciparum] 22 9.8
AAN87605 CSP (Invasion) [Plasmodium falciparum] 22 9.8
AAN87606 CSP (Invasion) [Plasmodium falciparum] 22 9.8
AAA29524 CSP (Invasion) [Plasmodium falciparum] 22 9.8
AAN87580 CSP (Invasion) [Plasmodium falciparum] 22 9.8
AAN87590 CSP (Invasion) [Plasmodium falciparum] 22 9.8
AAN87591 CSP (Invasion) [Plasmodium falciparum] 22 9.8
AAN87577 CSP (Invasion) [Plasmodium falciparum] 22 9.8
AAN87607 CSP (Invasion) [Plasmodium falciparum] 22 9.8
AAN87608 CSP (Invasion) [Plasmodium falciparum] 22 9.8
AAW78221 CSP (Invasion) [Plasmodium falciparum] 22 9.8
AAN87578 CSP (Invasion) [Plasmodium falciparum] 22 9.8
AAW78185 CSP (Invasion) [Plasmodium falciparum] 22 9.9
AAN87620 CSP (Invasion) [Plasmodium falciparum] 22 9.9
AAW78187 CSP (Invasion) [Plasmodium falciparum] 22 9.9
AAN87589 CSP (Invasion) [Plasmodium falciparum] 22 9.9
AAN87611 CSP (Invasion) [Plasmodium falciparum] 22 9.9
AAN87614 CSP (Invasion) [Plasmodium falciparum] 22 9.9
AAN87579 CSP (Invasion) [Plasmodium falciparum] 22 9.9
AAN87622 CSP (Invasion) [Plasmodium falciparum] 22 10.0
>M.Javanica_Scaff5694g040603 on XP_001608796 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1261
Score = 24.3 bits (51), Expect = 2.6, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Query: 9 SNHIEGNLSSTPYNLSSSNCFTWANACRAYFLGEAEAFK 47
SN ++GN + PY+++ + A+ R F EA FK
Sbjct: 353 SNAVDGNTAKQPYDMNYAGFVHTAH--RDSFNNEARVFK 389
>M.Javanica_Scaff5694g040603 on XP_001350415 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3056
Score = 24.3 bits (51), Expect = 3.1, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 94 HRRNHTTWLGTAKNWCSIRKNF 115
H N TT+L K C+IR +F
Sbjct: 1656 HAHNDTTYLAHKKACCAIRGSF 1677
>M.Javanica_Scaff5694g040603 on AAA29538 CSP (Invasion) [Plasmodium falciparum]
Length = 315
Score = 23.9 bits (50), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 100 TWLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 38 NYYGKQENWYSLKKNSRSLG 57
>M.Javanica_Scaff5694g040603 on AAN87615 CSP (Invasion) [Plasmodium falciparum]
Length = 356
Score = 23.1 bits (48), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 98 HTTWLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 52 EMNYYGKQENWYSLKKNSRSLG 73
>M.Javanica_Scaff5694g040603 on AAW78216 CSP (Invasion) [Plasmodium falciparum]
Length = 362
Score = 23.1 bits (48), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 101 WLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 40 YYGKQENWYSLKKNSRSLG 58
>M.Javanica_Scaff5694g040603 on AAN87600 CSP (Invasion) [Plasmodium falciparum]
Length = 363
Score = 23.1 bits (48), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 98 HTTWLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 52 EMNYYGKQENWYSLKKNSRSLG 73
>M.Javanica_Scaff5694g040603 on AAN87597 CSP (Invasion) [Plasmodium falciparum]
Length = 360
Score = 22.7 bits (47), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 98 HTTWLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 52 EMNYYGKQENWYSLKKNSRSLG 73
>M.Javanica_Scaff5694g040603 on AAN87596 CSP (Invasion) [Plasmodium falciparum]
Length = 360
Score = 22.7 bits (47), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 98 HTTWLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 52 EMNYYGKQENWYSLKKNSRSLG 73
>M.Javanica_Scaff5694g040603 on AAG37074 CSP (Invasion) [Plasmodium falciparum]
Length = 383
Score = 22.7 bits (47), Expect = 7.2, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 101 WLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 36 YYGKQENWYSLKKNSRSLG 54
>M.Javanica_Scaff5694g040603 on AAA29552 CSP (Invasion) [Plasmodium falciparum]
Length = 420
Score = 22.7 bits (47), Expect = 7.4, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 101 WLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 55 YYGKQENWYSLKKNSRSLG 73
>M.Javanica_Scaff5694g040603 on BAD73952 CSP (Invasion) [Plasmodium falciparum]
Length = 420
Score = 22.7 bits (47), Expect = 7.9, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 101 WLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 55 YYGKQENWYSLKKNSRSLG 73
>M.Javanica_Scaff5694g040603 on BAD73956 CSP (Invasion) [Plasmodium falciparum]
Length = 442
Score = 22.7 bits (47), Expect = 8.1, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 101 WLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 55 YYGKQENWYSLKKNSRSLG 73
>M.Javanica_Scaff5694g040603 on AAA29551 CSP (Invasion) [Plasmodium falciparum]
Length = 442
Score = 22.7 bits (47), Expect = 8.1, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 101 WLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 55 YYGKQENWYSLKKNSRSLG 73
>M.Javanica_Scaff5694g040603 on AAA29554 CSP (Invasion) [Plasmodium falciparum]
Length = 442
Score = 22.7 bits (47), Expect = 8.4, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 101 WLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 55 YYGKQENWYSLKKNSRSLG 73
>M.Javanica_Scaff5694g040603 on AAA29550 CSP (Invasion) [Plasmodium falciparum]
Length = 416
Score = 22.7 bits (47), Expect = 8.5, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 101 WLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 55 YYGKQENWYSLKKNSRSLG 73
>M.Javanica_Scaff5694g040603 on AAA29569 CSP (Invasion) [Plasmodium falciparum]
Length = 452
Score = 22.7 bits (47), Expect = 8.6, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 101 WLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 55 YYGKQENWYSLKKNSRSLG 73
>M.Javanica_Scaff5694g040603 on AAW78186 CSP (Invasion) [Plasmodium falciparum]
Length = 397
Score = 22.7 bits (47), Expect = 8.7, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 101 WLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 40 YYGKQENWYSLKKNSRSLG 58
>M.Javanica_Scaff5694g040603 on BAD73953 CSP (Invasion) [Plasmodium falciparum]
Length = 416
Score = 22.7 bits (47), Expect = 8.8, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 101 WLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 55 YYGKQENWYSLKKNSRSLG 73
>M.Javanica_Scaff5694g040603 on AAA29545 CSP (Invasion) [Plasmodium falciparum]
Length = 436
Score = 22.7 bits (47), Expect = 8.8, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 101 WLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 55 YYGKQENWYSLKKNSRSLG 73
>M.Javanica_Scaff5694g040603 on AAN87619 CSP (Invasion) [Plasmodium falciparum]
Length = 380
Score = 22.7 bits (47), Expect = 9.0, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 101 WLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 55 YYGKQENWYSLKKNSRSLG 73
>M.Javanica_Scaff5694g040603 on AAN87581 CSP (Invasion) [Plasmodium falciparum]
Length = 385
Score = 22.7 bits (47), Expect = 9.0, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 101 WLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 55 YYGKQENWYSLKKNSRSLG 73
>M.Javanica_Scaff5694g040603 on ABF83989 CSP (Invasion) [Plasmodium falciparum]
Length = 391
Score = 22.7 bits (47), Expect = 9.0, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 101 WLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 38 YYGKQENWYSLKKNSRSLG 56
>M.Javanica_Scaff5694g040603 on AAW78188 CSP (Invasion) [Plasmodium falciparum]
Length = 397
Score = 22.7 bits (47), Expect = 9.1, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 101 WLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 40 YYGKQENWYSLKKNSRSLG 58
>M.Javanica_Scaff5694g040603 on ABF83997 CSP (Invasion) [Plasmodium falciparum]
Length = 399
Score = 22.7 bits (47), Expect = 9.1, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 101 WLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 38 YYGKQENWYSLKKNSRSLG 56
>M.Javanica_Scaff5694g040603 on ABF84005 CSP (Invasion) [Plasmodium falciparum]
Length = 403
Score = 22.7 bits (47), Expect = 9.1, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 101 WLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 38 YYGKQENWYSLKKNSRSLG 56
>M.Javanica_Scaff5694g040603 on ABF83990 CSP (Invasion) [Plasmodium falciparum]
Length = 407
Score = 22.7 bits (47), Expect = 9.1, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 101 WLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 38 YYGKQENWYSLKKNSRSLG 56
>M.Javanica_Scaff5694g040603 on AAA29574 CSP (Invasion) [Plasmodium falciparum]
Length = 420
Score = 22.7 bits (47), Expect = 9.1, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 101 WLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 55 YYGKQENWYSLKKNSRSLG 73
>M.Javanica_Scaff5694g040603 on AAN87616 CSP (Invasion) [Plasmodium falciparum]
Length = 364
Score = 22.7 bits (47), Expect = 9.1, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 101 WLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 55 YYGKQENWYSLKKNSRSLG 73
>M.Javanica_Scaff5694g040603 on AAN87617 CSP (Invasion) [Plasmodium falciparum]
Length = 368
Score = 22.7 bits (47), Expect = 9.1, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 101 WLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 55 YYGKQENWYSLKKNSRSLG 73
>M.Javanica_Scaff5694g040603 on AAA29576 CSP (Invasion) [Plasmodium falciparum]
Length = 436
Score = 22.7 bits (47), Expect = 9.2, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 101 WLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 55 YYGKQENWYSLKKNSRSLG 73
>M.Javanica_Scaff5694g040603 on AAN87613 CSP (Invasion) [Plasmodium falciparum]
Length = 408
Score = 22.7 bits (47), Expect = 9.2, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 101 WLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 55 YYGKQENWYSLKKNSRSLG 73
>M.Javanica_Scaff5694g040603 on AAN87598 CSP (Invasion) [Plasmodium falciparum]
Length = 412
Score = 22.7 bits (47), Expect = 9.3, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 101 WLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 55 YYGKQENWYSLKKNSRSLG 73
>M.Javanica_Scaff5694g040603 on AAN87621 CSP (Invasion) [Plasmodium falciparum]
Length = 482
Score = 22.7 bits (47), Expect = 9.5, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 101 WLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 55 YYGKQENWYSLKKNSRSLG 73
>M.Javanica_Scaff5694g040603 on AAW78211 CSP (Invasion) [Plasmodium falciparum]
Length = 366
Score = 22.3 bits (46), Expect = 9.7, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 101 WLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 40 YYGKQENWYSLKKNSRSLG 58
>M.Javanica_Scaff5694g040603 on AAW78202 CSP (Invasion) [Plasmodium falciparum]
Length = 370
Score = 22.3 bits (46), Expect = 9.7, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 101 WLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 40 YYGKQENWYSLKKNSRSLG 58
>M.Javanica_Scaff5694g040603 on AAW78189 CSP (Invasion) [Plasmodium falciparum]
Length = 374
Score = 22.3 bits (46), Expect = 9.7, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 101 WLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 40 YYGKQENWYSLKKNSRSLG 58
>M.Javanica_Scaff5694g040603 on AAW78219 CSP (Invasion) [Plasmodium falciparum]
Length = 374
Score = 22.3 bits (46), Expect = 9.7, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 101 WLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 40 YYGKQENWYSLKKNSRSLG 58
>M.Javanica_Scaff5694g040603 on ABF83995 CSP (Invasion) [Plasmodium falciparum]
Length = 399
Score = 22.3 bits (46), Expect = 9.8, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 101 WLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 38 YYGKQENWYSLKKNSRSLG 56
>M.Javanica_Scaff5694g040603 on AAW78179 CSP (Invasion) [Plasmodium falciparum]
Length = 374
Score = 22.3 bits (46), Expect = 9.8, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 101 WLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 40 YYGKQENWYSLKKNSRSLG 58
>M.Javanica_Scaff5694g040603 on AAW78214 CSP (Invasion) [Plasmodium falciparum]
Length = 374
Score = 22.3 bits (46), Expect = 9.8, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 101 WLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 40 YYGKQENWYSLKKNSRSLG 58
>M.Javanica_Scaff5694g040603 on AAW78193 CSP (Invasion) [Plasmodium falciparum]
Length = 378
Score = 22.3 bits (46), Expect = 9.8, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 101 WLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 40 YYGKQENWYSLKKNSRSLG 58
>M.Javanica_Scaff5694g040603 on AAW78195 CSP (Invasion) [Plasmodium falciparum]
Length = 378
Score = 22.3 bits (46), Expect = 9.8, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 101 WLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 40 YYGKQENWYSLKKNSRSLG 58
>M.Javanica_Scaff5694g040603 on AAN87605 CSP (Invasion) [Plasmodium falciparum]
Length = 412
Score = 22.3 bits (46), Expect = 9.8, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 101 WLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 55 YYGKQENWYSLKKNSRSLG 73
>M.Javanica_Scaff5694g040603 on AAN87606 CSP (Invasion) [Plasmodium falciparum]
Length = 412
Score = 22.3 bits (46), Expect = 9.8, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 101 WLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 55 YYGKQENWYSLKKNSRSLG 73
>M.Javanica_Scaff5694g040603 on AAA29524 CSP (Invasion) [Plasmodium falciparum]
Length = 412
Score = 22.3 bits (46), Expect = 9.8, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 101 WLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 55 YYGKQENWYSLKKNSRSLG 73
>M.Javanica_Scaff5694g040603 on AAN87580 CSP (Invasion) [Plasmodium falciparum]
Length = 385
Score = 22.3 bits (46), Expect = 9.8, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 101 WLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 55 YYGKQENWYSLKKNSRSLG 73
>M.Javanica_Scaff5694g040603 on AAN87590 CSP (Invasion) [Plasmodium falciparum]
Length = 416
Score = 22.3 bits (46), Expect = 9.8, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 101 WLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 55 YYGKQENWYSLKKNSRSLG 73
>M.Javanica_Scaff5694g040603 on AAN87591 CSP (Invasion) [Plasmodium falciparum]
Length = 416
Score = 22.3 bits (46), Expect = 9.8, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 101 WLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 55 YYGKQENWYSLKKNSRSLG 73
>M.Javanica_Scaff5694g040603 on AAN87577 CSP (Invasion) [Plasmodium falciparum]
Length = 389
Score = 22.3 bits (46), Expect = 9.8, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 101 WLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 55 YYGKQENWYSLKKNSRSLG 73
>M.Javanica_Scaff5694g040603 on AAN87607 CSP (Invasion) [Plasmodium falciparum]
Length = 392
Score = 22.3 bits (46), Expect = 9.8, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 101 WLGTAKNWCSIRKNFKAVG 119
+ G +NW S++KN +++G
Sbjct: 55 YYGKQENWYSLKKNSRSLG 73
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff372g005473
(142 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ABR92034 MSA-1 (Invasion) [Babesia bovis] 27 0.50
ABR92023 MSA-1 (Invasion) [Babesia bovis] 27 0.51
ABR92033 MSA-1 (Invasion) [Babesia bovis] 27 0.52
ABR92025 MSA-1 (Invasion) [Babesia bovis] 27 0.55
XP_954175 TashAT3 (Establishment) [Theileria annulata] 27 0.57
ABR92032 MSA-1 (Invasion) [Babesia bovis] 26 0.98
XP_954179 TashAT2 (Establishment) [Theileria annulata] 25 2.4
XP_001347629 MSP3 (Invasion) [Plasmodium falciparum] 25 2.4
XP_829784 VSG (Establishment) [Trypanosoma brucei] 24 3.3
>M.Javanica_Scaff372g005473 on ABR92034 MSA-1 (Invasion) [Babesia bovis]
Length = 319
Score = 26.6 bits (57), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 29/88 (32%)
Query: 22 NVSGVENSSKNNLNQLESIYDNGEQTLIINRTKRYPGYGGFGDPGGDGAQPSYGCGGCRK 81
+V+G+ K L+ Y E K + G F PG D A P K
Sbjct: 176 DVNGMAGVCKEFLSPASDFYKLVESFDAFAHAKVHAQVGNFVKPGTDIAPPKDVTDALEK 235
Query: 82 GLCQSHDKDCRCVPCPRPRSRNRWRRPP 109
L + P P + ++PP
Sbjct: 236 ELQEQKPARSESTEVPAPGDASGVQQPP 263
>M.Javanica_Scaff372g005473 on ABR92023 MSA-1 (Invasion) [Babesia bovis]
Length = 319
Score = 26.6 bits (57), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 29/88 (32%)
Query: 22 NVSGVENSSKNNLNQLESIYDNGEQTLIINRTKRYPGYGGFGDPGGDGAQPSYGCGGCRK 81
+V+G+ K L+ Y E K + G F PG D A P K
Sbjct: 176 DVNGMAGVCKEFLSPASDFYKLVESFDAFAHAKVHAQVGNFVKPGTDIAPPKDVTDALEK 235
Query: 82 GLCQSHDKDCRCVPCPRPRSRNRWRRPP 109
L + P P + ++PP
Sbjct: 236 ELQEQKPARSESTEVPAPGDASGVQQPP 263
>M.Javanica_Scaff372g005473 on ABR92033 MSA-1 (Invasion) [Babesia bovis]
Length = 319
Score = 26.6 bits (57), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 29/88 (32%)
Query: 22 NVSGVENSSKNNLNQLESIYDNGEQTLIINRTKRYPGYGGFGDPGGDGAQPSYGCGGCRK 81
+V+G+ K L+ Y E K + G F PG D A P K
Sbjct: 176 DVNGMAGVCKEFLSPASDFYKLVESFDAFAHAKVHAQVGNFVKPGTDIAPPKDVTDALEK 235
Query: 82 GLCQSHDKDCRCVPCPRPRSRNRWRRPP 109
L + P P + ++PP
Sbjct: 236 ELQEQKPARSESTEVPAPGDASGVQQPP 263
>M.Javanica_Scaff372g005473 on ABR92025 MSA-1 (Invasion) [Babesia bovis]
Length = 319
Score = 26.6 bits (57), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 29/88 (32%)
Query: 22 NVSGVENSSKNNLNQLESIYDNGEQTLIINRTKRYPGYGGFGDPGGDGAQPSYGCGGCRK 81
+V+G+ K L+ Y E K + G F PG D A P K
Sbjct: 176 DVNGMAGVCKEFLSPASDFYKLVESFDAFAHAKVHAQVGNFVKPGTDIAPPKDVTDALEK 235
Query: 82 GLCQSHDKDCRCVPCPRPRSRNRWRRPP 109
L + P P + ++PP
Sbjct: 236 ELQEQKPARSESTEVPAPGDASGVQQPP 263
>M.Javanica_Scaff372g005473 on XP_954175 TashAT3 (Establishment) [Theileria annulata]
Length = 994
Score = 26.6 bits (57), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 60 GGFGDPGGDGAQPSYGCGGC 79
G P GDG++PS G G C
Sbjct: 540 AGAPPPPGDGSEPSDGPGDC 559
>M.Javanica_Scaff372g005473 on ABR92032 MSA-1 (Invasion) [Babesia bovis]
Length = 319
Score = 25.8 bits (55), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 29/88 (32%)
Query: 22 NVSGVENSSKNNLNQLESIYDNGEQTLIINRTKRYPGYGGFGDPGGDGAQPSYGCGGCRK 81
+V+G+ K L+ Y E K + G F PG D A P K
Sbjct: 176 DVNGMAGVCKEFLSPASDFYKLVESFDAFAHAKVHAQVGNFVKPGTDIAPPKDVTDALEK 235
Query: 82 GLCQSHDKDCRCVPCPRPRSRNRWRRPP 109
L + P P + ++PP
Sbjct: 236 ELQEQKPARSESTGVPAPGDASGVQQPP 263
>M.Javanica_Scaff372g005473 on XP_954179 TashAT2 (Establishment) [Theileria annulata]
Length = 1161
Score = 25.0 bits (53), Expect = 2.4, Method: Composition-based stats.
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 65 PGGDGAQPSYGCGGC 79
P GDG++PS G G C
Sbjct: 563 PPGDGSEPSDGPGDC 577
>M.Javanica_Scaff372g005473 on XP_001347629 MSP3 (Invasion) [Plasmodium falciparum]
Length = 354
Score = 24.6 bits (52), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 1 MLTFIHLILYIFIHSLQSITKNVSGVENSSKNNLNQLESIYDNGEQ 46
M +FI++ L +F+ L NV+ E K NLN +I +N Q
Sbjct: 1 MKSFINITLSLFLLHLYIYINNVASKEIVKKYNLNLRNAILNNNSQ 46
>M.Javanica_Scaff372g005473 on XP_829784 VSG (Establishment) [Trypanosoma brucei]
Length = 474
Score = 24.3 bits (51), Expect = 3.3, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 121 RPRHYKRTRTYWWKKRYLV 139
+P+ YK R W K ++L+
Sbjct: 99 KPQQYKENRPKWQKAKHLI 117
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff28g000661
(136 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7559g048571
(51 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff27937g094399
(87 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_966151 TLP (Invasion) [Plasmodium falciparum] 28 0.086
CAB72264 Toxofilin (Establishment) [Toxoplasma gondii] 23 2.9
CAD21778 ESAG-7 (Establishment) [Trypanosoma brucei] 23 4.2
CAD21779 ESAG-7 (Establishment) [Trypanosoma brucei] 23 4.2
CAD21456 ESAG-7 (Establishment) [Trypanosoma brucei] 22 4.8
CAD21780 ESAG-6 (Establishment) [Trypanosoma brucei] 22 5.6
CAD21872 ESAG-6 (Establishment) [Trypanosoma brucei] 22 5.8
AAA30187 ESAG-6 (Establishment) [Trypanosoma brucei] 22 6.5
XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum] 22 7.8
>M.Javanica_Scaff27937g094399 on XP_966151 TLP (Invasion) [Plasmodium falciparum]
Length = 1371
Score = 27.7 bits (60), Expect = 0.086, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 24 EEDYENLNEEQQNIFKKQNLRVERTLRSLIFPAL 57
+E+ + L++E+ NI N ++RT RSL FP +
Sbjct: 1054 QENIDILSKEEDNISSNYNNELQRTKRSLDFPEI 1087
>M.Javanica_Scaff27937g094399 on CAB72264 Toxofilin (Establishment) [Toxoplasma gondii]
Length = 245
Score = 23.1 bits (48), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 4/26 (15%)
Query: 27 YENLNEEQQNIFKKQNLRVERTLRSL 52
YENLN EQQ +++ V+R L L
Sbjct: 127 YENLNTEQQKAYEQ----VQRDLSQL 148
>M.Javanica_Scaff27937g094399 on CAD21778 ESAG-7 (Establishment) [Trypanosoma brucei]
Length = 340
Score = 22.7 bits (47), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 47 RTLRSLIFPALRNRFLPSSELEE 69
+ +R+L+ LRN F ELEE
Sbjct: 87 KDIRTLLKTVLRNEFTFQQELEE 109
>M.Javanica_Scaff27937g094399 on CAD21779 ESAG-7 (Establishment) [Trypanosoma brucei]
Length = 340
Score = 22.7 bits (47), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 47 RTLRSLIFPALRNRFLPSSELEE 69
+ +R+L+ LRN F ELEE
Sbjct: 87 KDIRTLLKTVLRNEFTFQQELEE 109
>M.Javanica_Scaff27937g094399 on CAD21456 ESAG-7 (Establishment) [Trypanosoma brucei]
Length = 338
Score = 22.3 bits (46), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 47 RTLRSLIFPALRNRFLPSSELEE 69
+ +R+L+ LRN F ELEE
Sbjct: 85 KDIRTLLKTVLRNEFTFQQELEE 107
>M.Javanica_Scaff27937g094399 on CAD21780 ESAG-6 (Establishment) [Trypanosoma brucei]
Length = 401
Score = 22.3 bits (46), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 47 RTLRSLIFPALRNRFLPSSELEE 69
+ +R+L+ LRN F ELEE
Sbjct: 87 KDIRTLLKTVLRNEFTFQQELEE 109
>M.Javanica_Scaff27937g094399 on CAD21872 ESAG-6 (Establishment) [Trypanosoma brucei]
Length = 400
Score = 22.3 bits (46), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 47 RTLRSLIFPALRNRFLPSSELEE 69
+ +R+L+ LRN F ELEE
Sbjct: 86 KDIRTLLKTVLRNEFTFQQELEE 108
>M.Javanica_Scaff27937g094399 on AAA30187 ESAG-6 (Establishment) [Trypanosoma brucei]
Length = 400
Score = 22.3 bits (46), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 47 RTLRSLIFPALRNRFLPSSELEE 69
+ +R+L+ LRN F ELEE
Sbjct: 86 KDIRTLLKTVLRNEFTFQQELEE 108
>M.Javanica_Scaff27937g094399 on XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1711
Score = 21.9 bits (45), Expect = 7.8, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 6/44 (13%)
Query: 14 LADFHLPSISEEDYENLN------EEQQNIFKKQNLRVERTLRS 51
L +F+L +I ED +N N E+ + I K+N V+ L++
Sbjct: 672 LLEFYLENIFLEDMKNANGDPKVIEKFKEILGKENEEVQDPLKT 715
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5373g039163
(151 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAC20154 Eimepsin (Protease) [Eimeria tenella] 29 0.088
AAS90844 Toxomepsin 2 (Protease) [Toxoplasma gondii] 26 1.1
XP_845633 VSG (Establishment) [Trypanosoma brucei] 25 1.7
>M.Javanica_Scaff5373g039163 on CAC20154 Eimepsin (Protease) [Eimeria tenella]
Length = 255
Score = 28.9 bits (63), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 44 GAKGINFPNVVFFKGIPYAAAPVGDRRWKEPISAEN 79
G G+ FP+V +G+P +A P+ D+ KE + N
Sbjct: 213 GLVGLGFPDVSGEEGLPSSALPIVDQMVKEKVLDRN 248
>M.Javanica_Scaff5373g039163 on AAS90844 Toxomepsin 2 (Protease) [Toxoplasma gondii]
Length = 255
Score = 25.8 bits (55), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 44 GAKGINFPNVVFFKGIPYAAAPVGDRRWKEPISAEN 79
G G+ FP+V +G+P A P+ D K+ + N
Sbjct: 215 GLVGLGFPDVAGEEGLPPDALPLVDSMMKQKLLKRN 250
>M.Javanica_Scaff5373g039163 on XP_845633 VSG (Establishment) [Trypanosoma brucei]
Length = 488
Score = 25.4 bits (54), Expect = 1.7, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 12 TFLGQARLENCSVPSKGSDNSPIACTESG 40
TFL E+C++P+ ++ +CTE+
Sbjct: 146 TFLSAGTGEHCTIPTSRGPSTTDSCTEAA 174
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff28763g095498
(65 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum] 22 3.3
XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum] 22 5.4
XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum] 21 8.4
>M.Javanica_Scaff28763g095498 on XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1711
Score = 22.3 bits (46), Expect = 3.3, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Query: 18 QKWIGTVRGVGNRKSRKSELAQKSELGNQNFFR---KSEGK 55
QK+ + G G R+ ++S + K G + F ++EGK
Sbjct: 397 QKYQNEISGGGGRRQKRSTHSTKEYEGYEKHFNEELRNEGK 437
>M.Javanica_Scaff28763g095498 on XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2980
Score = 21.6 bits (44), Expect = 5.4, Method: Composition-based stats.
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 11 HAIVDCVQKWIGTVR 25
I DCV+KWI R
Sbjct: 2319 QCIKDCVEKWIQNKR 2333
>M.Javanica_Scaff28763g095498 on XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2178
Score = 21.2 bits (43), Expect = 8.4, Method: Composition-based stats.
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 8 KKPHAIVDCVQKWI 21
+K I DCV+KWI
Sbjct: 1458 EKTICINDCVEKWI 1471
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff27374g093666
(81 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_821154 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.035
XP_001349034 PfEMP1 (Establishment) [Plasmodium falciparum] 27 0.096
XP_812339 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.14
XP_821137 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.4
XP_828098 VSG (Establishment) [Trypanosoma brucei] 22 4.7
XP_001348165 RESA (Others) [plasmodium falciparum] 22 5.0
XP_814625 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.4
>M.Javanica_Scaff27374g093666 on XP_821154 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 951
Score = 28.5 bits (62), Expect = 0.035, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
Query: 35 PNNFGGNISTLQQQQQQPPLLSTINEDTPRMYTEALTNVT 74
P++ GG QQQ +Q PL ++ NE + + T A+++ T
Sbjct: 771 PSSLGG-----QQQTEQDPLRTSENEGSGVLSTSAVSSAT 805
>M.Javanica_Scaff27374g093666 on XP_001349034 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 27.3 bits (59), Expect = 0.096, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 8/62 (12%)
Query: 23 IMIDQNASNSVIPNNFGGNI--------STLQQQQQQPPLLSTINEDTPRMYTEALTNVT 74
I I QN N + NN GNI S L ++ P +++I++ E N+
Sbjct: 1901 ISILQNPQNDLPQNNISGNIQMDTHPSVSILHDDMEEKPFITSIHDRDLHNGEEVTYNIN 1960
Query: 75 LE 76
L+
Sbjct: 1961 LD 1962
>M.Javanica_Scaff27374g093666 on XP_812339 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 949
Score = 26.6 bits (57), Expect = 0.14, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
Query: 35 PNNFGGNISTLQQQQQQPPLLSTINEDTPRMYTEALTNVT 74
P++ GG QQQ +Q PL ++ N + + T A+++ T
Sbjct: 762 PSSLGG-----QQQTEQDPLRTSENAGSGSLSTSAVSSAT 796
>M.Javanica_Scaff27374g093666 on XP_821137 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 956
Score = 22.7 bits (47), Expect = 3.4, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 19/46 (41%)
Query: 29 ASNSVIPNNFGGNISTLQQQQQQPPLLSTINEDTPRMYTEALTNVT 74
AS P +I QQQ +Q PL + N + + T L T
Sbjct: 769 ASKQATPEAETPSILGEQQQNKQDPLRKSENAGSGGLSTSGLPTAT 814
>M.Javanica_Scaff27374g093666 on XP_828098 VSG (Establishment) [Trypanosoma brucei]
Length = 474
Score = 22.3 bits (46), Expect = 4.7, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 43 STLQQQQQQPPLLSTINEDTPRMYTEALTN 72
+ LQQ Q L+ ++E+ +YT A N
Sbjct: 350 TRLQQAQTLALLVEALSEEAKSVYTAAAQN 379
>M.Javanica_Scaff27374g093666 on XP_001348165 RESA (Others) [plasmodium falciparum]
Length = 1085
Score = 22.3 bits (46), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 39 GGNISTLQQQQQQPPLLSTINEDTPRMYTEAL 70
GG+I T++ QQ++P + T+ E Y + L
Sbjct: 347 GGDIETVEPQQEEP--VQTVQEQQVNEYGDIL 376
>M.Javanica_Scaff27374g093666 on XP_814625 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 941
Score = 22.3 bits (46), Expect = 5.4, Method: Composition-based stats.
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 31 NSVIPNNFGGNISTLQQ 47
N+ + NN GGN +TL +
Sbjct: 530 NATVKNNDGGNKATLHE 546
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2999g026534
(63 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5510g039778
(181 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_821390 Trans-sialidase (Invasion) [Trypanosoma cruzi] 31 0.038
XP_001351221 CTRP (Adhesin) [Plasmodium falciparum] 30 0.070
XP_809960 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.34
XP_821669 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.49
XP_810808 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.7
XP_001349032 PfEMP1 (Establishment) [Plasmodium falciparum] 26 1.9
>M.Javanica_Scaff5510g039778 on XP_821390 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 940
Score = 30.8 bits (68), Expect = 0.038, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Query: 13 LLFLQQFSPSSVSSDHPSPPLSPNRPTPTHKTATHQSFPAPPTHFPTTSPSLTPYHFAPQ 72
LL+ + + +S+ + P +S + T T K T P+P P T + TP Q
Sbjct: 704 LLYNRPLNDDEISALNAKPSVSKAKDTKTVKEGT----PSPEASKPATLETETPSSLGGQ 759
Query: 73 QHTSTSFFIRS 83
Q T +S
Sbjct: 760 QQTEQELLKKS 770
>M.Javanica_Scaff5510g039778 on XP_001351221 CTRP (Adhesin) [Plasmodium falciparum]
Length = 2112
Score = 30.0 bits (66), Expect = 0.070, Method: Composition-based stats.
Identities = 32/123 (26%), Positives = 52/123 (42%), Gaps = 11/123 (8%)
Query: 20 SPSSVSSDHPS--PPLSPNRPTPTHKTATHQSFPAPPTHFPTTSPS-LTPYHFAPQQHTS 76
SPS + PS P SP+ TP + + +S P P+ +PS TP +P + T
Sbjct: 773 SPSESTPGSPSESTPGSPSESTPGNPS---ESTPGSPSESTPGNPSESTPG--SPSESTP 827
Query: 77 TSFFIRSPQHFPHFFHSSSTILLI---SSSYPLPQTDRPILPLTTSLPPKYTLSPTTTSF 133
S +P H++ + LI S+S ++ ++P T L +S +
Sbjct: 828 GSPSESTPCSGTCLCHNTYDLTLIIDESASIGYSNWEKEVVPFTIGLASNLEISEKKVNM 887
Query: 134 FIL 136
IL
Sbjct: 888 GIL 890
>M.Javanica_Scaff5510g039778 on XP_809960 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 890
Score = 28.1 bits (61), Expect = 0.34, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 6/33 (18%)
Query: 21 PSSVSSDH---PSPPLSPN---RPTPTHKTATH 47
PS+VSSD PS P++PN TP+ TH
Sbjct: 728 PSTVSSDSIIPPSHPVTPNAQKTETPSTPAGTH 760
>M.Javanica_Scaff5510g039778 on XP_821669 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 879
Score = 27.3 bits (59), Expect = 0.49, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 11/40 (27%)
Query: 20 SPSSVSSDHPSPPLSP-----------NRPTPTHKTATHQ 48
SPS V+SD PP++P + P TH+T Q
Sbjct: 718 SPSPVASDSIIPPITPVKKNAQIAGTSSTPAVTHRTQQRQ 757
>M.Javanica_Scaff5510g039778 on XP_810808 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 735
Score = 25.8 bits (55), Expect = 1.7, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 16/66 (24%)
Query: 82 RSPQHFPHFFHSSSTILLI----------------SSSYPLPQTDRPILPLTTSLPPKYT 125
R P F F+S+ +LL+ S + LPQ LP T + PK
Sbjct: 35 RRPHMFRRVFNSAVLLLLVVMMCSVCGASNAVTSNSGNAQLPQGVDLFLPQMTPVQPKDG 94
Query: 126 LSPTTT 131
+ P TT
Sbjct: 95 IVPVTT 100
>M.Javanica_Scaff5510g039778 on XP_001349032 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2267
Score = 25.8 bits (55), Expect = 1.9, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 27 DHPSPPLSPNRPTPTHKTATHQSFPAPP 54
D P P +S P TH T +H + P
Sbjct: 1941 DIPQPDVSKELPLNTHPTPSHDTLDQKP 1968
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff523g007181
(153 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609166 variant erythrocyte surface antigen-1, beta subuni... 27 0.82
AAW78157 TRAP (Invasion) [Plasmodium falciparum] 26 1.4
AAA29773 TRAP (Invasion) [Plasmodium falciparum] 25 1.5
AAW78168 TRAP (Invasion) [Plasmodium falciparum] 25 1.7
XP_001609755 variant erythrocyte surface antigen-1, beta subuni... 25 1.7
XP_001610720 variant erythrocyte surface antigen-1, beta subuni... 25 2.9
AAW78174 TRAP (Invasion) [Plasmodium falciparum] 24 5.0
AAA29775 TRAP (Invasion) [Plasmodium falciparum] 24 5.1
AAA29772 TRAP (Invasion) [Plasmodium falciparum] 24 5.2
AAW78156 TRAP (Invasion) [Plasmodium falciparum] 24 5.4
AAW78133 TRAP (Invasion) [Plasmodium falciparum] 24 5.5
AAW78163 TRAP (Invasion) [Plasmodium falciparum] 24 5.5
AAW78167 TRAP (Invasion) [Plasmodium falciparum] 24 5.5
AAW78144 TRAP (Invasion) [Plasmodium falciparum] 24 5.6
AAW78152 TRAP (Invasion) [Plasmodium falciparum] 24 5.6
AAW78151 TRAP (Invasion) [Plasmodium falciparum] 24 5.6
AAW78139 TRAP (Invasion) [Plasmodium falciparum] 24 5.6
AAW78173 TRAP (Invasion) [Plasmodium falciparum] 24 5.6
AAW78175 TRAP (Invasion) [Plasmodium falciparum] 24 5.7
AAW78138 TRAP (Invasion) [Plasmodium falciparum] 24 6.1
AAQ11895 TRAP (Invasion) [Plasmodium falciparum] 23 7.9
AAA29774 TRAP (Invasion) [Plasmodium falciparum] 23 7.9
AAQ11892 TRAP (Invasion) [Plasmodium falciparum] 23 8.0
AAQ11894 TRAP (Invasion) [Plasmodium falciparum] 23 8.0
AAA29777 TRAP (Invasion) [Plasmodium falciparum] 23 8.0
XP_001609449 variant erythrocyte surface antigen-1, beta subuni... 23 8.0
AAA29770 TRAP (Invasion) [Plasmodium falciparum] 23 8.1
AAA29771 TRAP (Invasion) [Plasmodium falciparum] 23 8.1
AAA29776 TRAP (Invasion) [Plasmodium falciparum] 23 8.1
XP_001608664 variant erythrocyte surface antigen-1, beta subuni... 23 8.1
XP_001611146 variant erythrocyte surface antigen-1, beta subuni... 23 8.3
AAQ11891 TRAP (Invasion) [Plasmodium falciparum] 23 8.3
AAW78134 TRAP (Invasion) [Plasmodium falciparum] 23 9.0
AAW78171 TRAP (Invasion) [Plasmodium falciparum] 23 9.2
AAW78172 TRAP (Invasion) [Plasmodium falciparum] 23 9.3
AAW78130 TRAP (Invasion) [Plasmodium falciparum] 23 9.6
AAW78149 TRAP (Invasion) [Plasmodium falciparum] 23 9.6
AAW78153 TRAP (Invasion) [Plasmodium falciparum] 23 9.6
AAW78169 TRAP (Invasion) [Plasmodium falciparum] 23 9.6
AAW78137 TRAP (Invasion) [Plasmodium falciparum] 23 9.7
AAW78164 TRAP (Invasion) [Plasmodium falciparum] 23 9.9
>M.Javanica_Scaff523g007181 on XP_001609166 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1161
Score = 26.6 bits (57), Expect = 0.82, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 106 ASKCCSGKCDGDTHICYSC--TQNGDKCTFASEC 137
AS CCS H C C ++ G+KC ++ C
Sbjct: 168 ASGCCSTSSGTPCHQCSQCGTSEAGNKCYLSAYC 201
>M.Javanica_Scaff523g007181 on AAW78157 TRAP (Invasion) [Plasmodium falciparum]
Length = 557
Score = 25.8 bits (55), Expect = 1.4, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 8/49 (16%)
Query: 39 KCCRNLNCKNKKI-----GNGAVFAYKCSLSGCVHEGNKCN---DIGWE 79
K RNLN + KI G G A+ L GC KCN D WE
Sbjct: 173 KESRNLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSNGKCNLYADSAWE 221
>M.Javanica_Scaff523g007181 on AAA29773 TRAP (Invasion) [Plasmodium falciparum]
Length = 568
Score = 25.4 bits (54), Expect = 1.5, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 8/49 (16%)
Query: 39 KCCRNLNCKNKKI-----GNGAVFAYKCSLSGCVHEGNKCN---DIGWE 79
K RNLN + KI G G A+ L GC KCN D WE
Sbjct: 173 KESRNLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYADSAWE 221
>M.Javanica_Scaff523g007181 on AAW78168 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 25.4 bits (54), Expect = 1.7, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 8/46 (17%)
Query: 42 RNLNCKNKKI-----GNGAVFAYKCSLSGCVHEGNKCN---DIGWE 79
RNLN + KI G G A+ L GC KCN D WE
Sbjct: 176 RNLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYADSAWE 221
>M.Javanica_Scaff523g007181 on XP_001609755 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 920
Score = 25.4 bits (54), Expect = 1.7, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 7/43 (16%)
Query: 109 CCSGKCDGDTHICYSCTQNGDKCTFASECCSGSCSSKQHICQR 151
CC G++ I CT +G A +CC+GS ++ H C++
Sbjct: 142 CC---LKGESGIGKKCTCSGG----AGQCCTGSSNTPCHECEK 177
Score = 23.9 bits (50), Expect = 5.0, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Query: 106 ASKCCSGKCDGDTHICYSC----TQNGDKCTFASEC 137
A +CC+G + H C C ++ +KC ++ C
Sbjct: 160 AGQCCTGSSNTPCHECEKCGTSASRADNKCYLSAYC 195
>M.Javanica_Scaff523g007181 on XP_001610720 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1102
Score = 24.6 bits (52), Expect = 2.9, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 7/55 (12%)
Query: 60 KCSLSGCVHEGNKCNDIGWEC-CYGFK---CNSRSSKCERCLVDGSTSDVASKCC 110
KC L G EG K IG +C C G C+ KC C G + A+K C
Sbjct: 146 KCCLKG---EGGKSTGIGRKCDCNGSGVNCCSPGGKKCHDCTECGPKATEATKKC 197
Score = 24.6 bits (52), Expect = 3.4, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
Query: 100 GSTSDVASKC-CSGK----CDGDTHICYSCTQNGDKCTFASECCSGSCSSK 145
G ++ + KC C+G C C+ CT+ G K T A++ C S K
Sbjct: 154 GKSTGIGRKCDCNGSGVNCCSPGGKKCHDCTECGPKATEATKKCYLSAYCK 204
>M.Javanica_Scaff523g007181 on AAW78174 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 23.9 bits (50), Expect = 5.0, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Query: 30 EEPCNESDKKCCRNLNCKNKKIGNGAVFAYKCSLSGCVHEGNKCN---DIGWE 79
++ ES K R + IG G A+ L GC KCN D WE
Sbjct: 169 QDSLKESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYADSAWE 221
>M.Javanica_Scaff523g007181 on AAA29775 TRAP (Invasion) [Plasmodium falciparum]
Length = 574
Score = 23.9 bits (50), Expect = 5.1, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Query: 30 EEPCNESDKKCCRNLNCKNKKIGNGAVFAYKCSLSGCVHEGNKCN---DIGWE 79
++ ES K R + IG G A+ L GC KCN D WE
Sbjct: 169 QDSLKESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYADSAWE 221
>M.Javanica_Scaff523g007181 on AAA29772 TRAP (Invasion) [Plasmodium falciparum]
Length = 565
Score = 23.9 bits (50), Expect = 5.2, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Query: 30 EEPCNESDKKCCRNLNCKNKKIGNGAVFAYKCSLSGCVHEGNKCN---DIGWE 79
++ ES K R + IG G A+ L GC KCN D WE
Sbjct: 169 QDSLKESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYADSAWE 221
>M.Javanica_Scaff523g007181 on AAW78156 TRAP (Invasion) [Plasmodium falciparum]
Length = 581
Score = 23.9 bits (50), Expect = 5.4, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Query: 30 EEPCNESDKKCCRNLNCKNKKIGNGAVFAYKCSLSGCVHEGNKCN---DIGWE 79
++ ES K R + IG G A+ L GC KCN D WE
Sbjct: 169 QDSLKESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYADSAWE 221
>M.Javanica_Scaff523g007181 on AAW78133 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 23.9 bits (50), Expect = 5.5, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Query: 30 EEPCNESDKKCCRNLNCKNKKIGNGAVFAYKCSLSGCVHEGNKCN---DIGWE 79
++ ES K R + IG G A+ L GC KCN D WE
Sbjct: 169 QDSLKESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYADSAWE 221
>M.Javanica_Scaff523g007181 on AAW78163 TRAP (Invasion) [Plasmodium falciparum]
Length = 565
Score = 23.9 bits (50), Expect = 5.5, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Query: 30 EEPCNESDKKCCRNLNCKNKKIGNGAVFAYKCSLSGCVHEGNKCN---DIGWE 79
++ ES K R + IG G A+ L GC KCN D WE
Sbjct: 169 QDSLKESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYADSAWE 221
>M.Javanica_Scaff523g007181 on AAW78167 TRAP (Invasion) [Plasmodium falciparum]
Length = 575
Score = 23.9 bits (50), Expect = 5.5, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Query: 30 EEPCNESDKKCCRNLNCKNKKIGNGAVFAYKCSLSGCVHEGNKCN---DIGWE 79
++ ES K R + IG G A+ L GC KCN D WE
Sbjct: 169 QDSLKESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYADSAWE 221
>M.Javanica_Scaff523g007181 on AAW78144 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 23.9 bits (50), Expect = 5.6, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Query: 30 EEPCNESDKKCCRNLNCKNKKIGNGAVFAYKCSLSGCVHEGNKCN---DIGWE 79
++ ES K R + IG G A+ L GC KCN D WE
Sbjct: 169 QDSLKESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYADSAWE 221
>M.Javanica_Scaff523g007181 on AAW78152 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 23.9 bits (50), Expect = 5.6, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Query: 30 EEPCNESDKKCCRNLNCKNKKIGNGAVFAYKCSLSGCVHEGNKCN---DIGWE 79
++ ES K R + IG G A+ L GC KCN D WE
Sbjct: 169 QDSLKESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYADSAWE 221
>M.Javanica_Scaff523g007181 on AAW78151 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 23.9 bits (50), Expect = 5.6, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Query: 30 EEPCNESDKKCCRNLNCKNKKIGNGAVFAYKCSLSGCVHEGNKCN---DIGWE 79
++ ES K R + IG G A+ L GC KCN D WE
Sbjct: 169 QDSLKESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYADSAWE 221
>M.Javanica_Scaff523g007181 on AAW78139 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 23.9 bits (50), Expect = 5.6, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Query: 30 EEPCNESDKKCCRNLNCKNKKIGNGAVFAYKCSLSGCVHEGNKCN---DIGWE 79
++ ES K R + IG G A+ L GC KCN D WE
Sbjct: 169 QDSLKESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYADSAWE 221
>M.Javanica_Scaff523g007181 on AAW78173 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 23.9 bits (50), Expect = 5.6, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Query: 30 EEPCNESDKKCCRNLNCKNKKIGNGAVFAYKCSLSGCVHEGNKCN---DIGWE 79
++ ES K R + IG G A+ L GC KCN D WE
Sbjct: 169 QDSLKESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYADSAWE 221
>M.Javanica_Scaff523g007181 on AAW78175 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 23.9 bits (50), Expect = 5.7, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Query: 30 EEPCNESDKKCCRNLNCKNKKIGNGAVFAYKCSLSGCVHEGNKCN---DIGWE 79
++ ES K R + IG G A+ L GC KCN D WE
Sbjct: 169 QDSLKESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYADSAWE 221
>M.Javanica_Scaff523g007181 on AAW78138 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 23.9 bits (50), Expect = 6.1, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Query: 30 EEPCNESDKKCCRNLNCKNKKIGNGAVFAYKCSLSGCVHEGNKCN---DIGWE 79
++ ES K R + IG G A+ L GC KCN D WE
Sbjct: 169 QDSLKESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYADSAWE 221
>M.Javanica_Scaff523g007181 on AAQ11895 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 23.5 bits (49), Expect = 7.9, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Query: 30 EEPCNESDKKCCRNLNCKNKKIGNGAVFAYKCSLSGCVHEGNKCN---DIGWE 79
++ ES K R + IG G A+ L GC KCN D WE
Sbjct: 169 QDSLKESRKLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYADSAWE 221
>M.Javanica_Scaff523g007181 on AAA29774 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 23.5 bits (49), Expect = 7.9, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Query: 30 EEPCNESDKKCCRNLNCKNKKIGNGAVFAYKCSLSGCVHEGNKCN---DIGWE 79
++ ES K R + IG G A+ L GC KCN D WE
Sbjct: 169 QDSLKESRKLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYADSAWE 221
>M.Javanica_Scaff523g007181 on AAQ11892 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 23.5 bits (49), Expect = 8.0, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Query: 30 EEPCNESDKKCCRNLNCKNKKIGNGAVFAYKCSLSGCVHEGNKCN---DIGWE 79
++ ES K R + IG G A+ L GC KCN D WE
Sbjct: 169 QDSLKESRKLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYADSAWE 221
>M.Javanica_Scaff523g007181 on AAQ11894 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 23.5 bits (49), Expect = 8.0, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Query: 30 EEPCNESDKKCCRNLNCKNKKIGNGAVFAYKCSLSGCVHEGNKCN---DIGWE 79
++ ES K R + IG G A+ L GC KCN D WE
Sbjct: 169 QDSLKESRKLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYADSAWE 221
>M.Javanica_Scaff523g007181 on AAA29777 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 23.5 bits (49), Expect = 8.0, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Query: 30 EEPCNESDKKCCRNLNCKNKKIGNGAVFAYKCSLSGCVHEGNKCN---DIGWE 79
++ ES K R + IG G A+ L GC KCN D WE
Sbjct: 169 QDSLKESRKLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYADSAWE 221
>M.Javanica_Scaff523g007181 on XP_001609449 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 776
Score = 23.5 bits (49), Expect = 8.0, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 30/75 (40%), Gaps = 12/75 (16%)
Query: 75 DIGWECCYGFKCNSRSSK-----CERCLVDGSTSDVASKCCSGKCDGDTHICYSCTQNGD 129
D G +CC K S SK CER S + V + CC+ G T G
Sbjct: 141 DTGDDCC--LKGTSGKSKGIGKACER-----SGAGVGATCCTSGGSGSHGCSKCGTSGGK 193
Query: 130 KCTFASECCSGSCSS 144
KC ++ C + S S
Sbjct: 194 KCYLSAYCKATSPPS 208
>M.Javanica_Scaff523g007181 on AAA29770 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 23.5 bits (49), Expect = 8.1, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Query: 30 EEPCNESDKKCCRNLNCKNKKIGNGAVFAYKCSLSGCVHEGNKCN---DIGWE 79
++ ES K R + IG G A+ L GC KCN D WE
Sbjct: 169 QDSLKESRKLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYADSAWE 221
>M.Javanica_Scaff523g007181 on AAA29771 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 23.5 bits (49), Expect = 8.1, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Query: 30 EEPCNESDKKCCRNLNCKNKKIGNGAVFAYKCSLSGCVHEGNKCN---DIGWE 79
++ ES K R + IG G A+ L GC KCN D WE
Sbjct: 169 QDSLKESRKLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYADSAWE 221
>M.Javanica_Scaff523g007181 on AAA29776 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 23.5 bits (49), Expect = 8.1, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Query: 30 EEPCNESDKKCCRNLNCKNKKIGNGAVFAYKCSLSGCVHEGNKCN---DIGWE 79
++ ES K R + IG G A+ L GC KCN D WE
Sbjct: 169 QDSLKESRKLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYADSAWE 221
>M.Javanica_Scaff523g007181 on XP_001608664 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1116
Score = 23.5 bits (49), Expect = 8.1, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 21/54 (38%), Gaps = 7/54 (12%)
Query: 76 IGW-----ECCYGFKCNSRSSKCERCLVDGSTSDVASKCCSGKCDGDTHICYSC 124
+GW +CC ++C G T + CCSG +H C +C
Sbjct: 133 VGWKDERDDCCLKGAGGESKGIGKKCKCAGGTGGGVTNCCSGGT--ASHECETC 184
>M.Javanica_Scaff523g007181 on XP_001611146 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 958
Score = 23.5 bits (49), Expect = 8.3, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 21/54 (38%), Gaps = 7/54 (12%)
Query: 76 IGW-----ECCYGFKCNSRSSKCERCLVDGSTSDVASKCCSGKCDGDTHICYSC 124
+GW +CC ++C G T + CCSG +H C +C
Sbjct: 133 VGWKDERDDCCLKGAGGESKGIGKKCKCAGGTGGGVTNCCSGGT--ASHECETC 184
>M.Javanica_Scaff523g007181 on AAQ11891 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 23.1 bits (48), Expect = 8.3, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Query: 30 EEPCNESDKKCCRNLNCKNKKIGNGAVFAYKCSLSGCVHEGNKCN---DIGWE 79
++ ES K R + IG G A+ L GC KCN D WE
Sbjct: 169 QDSLKESRKLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYADSAWE 221
>M.Javanica_Scaff523g007181 on AAW78134 TRAP (Invasion) [Plasmodium falciparum]
Length = 551
Score = 23.1 bits (48), Expect = 9.0, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Query: 30 EEPCNESDKKCCRNLNCKNKKIGNGAVFAYKCSLSGCVHEGNKCN---DIGWE 79
++ ES K R + IG G A+ L GC KCN D WE
Sbjct: 169 QDSLKESRKLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYADSAWE 221
>M.Javanica_Scaff523g007181 on AAW78171 TRAP (Invasion) [Plasmodium falciparum]
Length = 551
Score = 23.1 bits (48), Expect = 9.2, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Query: 30 EEPCNESDKKCCRNLNCKNKKIGNGAVFAYKCSLSGCVHEGNKCN---DIGWE 79
++ ES K R + IG G A+ L GC KCN D WE
Sbjct: 169 QDSLKESRKLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYADSAWE 221
>M.Javanica_Scaff523g007181 on AAW78172 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 23.1 bits (48), Expect = 9.3, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Query: 30 EEPCNESDKKCCRNLNCKNKKIGNGAVFAYKCSLSGCVHEGNKCN---DIGWE 79
++ ES K R + IG G A+ L GC KCN D WE
Sbjct: 169 QDSLKESRKLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYADSAWE 221
>M.Javanica_Scaff523g007181 on AAW78130 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 23.1 bits (48), Expect = 9.6, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 14/32 (43%), Gaps = 3/32 (9%)
Query: 51 IGNGAVFAYKCSLSGCVHEGNKCN---DIGWE 79
IG G A+ L GC KCN D WE
Sbjct: 190 IGQGINVAFNRFLVGCHPSDGKCNLYADSAWE 221
>M.Javanica_Scaff523g007181 on AAW78149 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 23.1 bits (48), Expect = 9.6, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Query: 30 EEPCNESDKKCCRNLNCKNKKIGNGAVFAYKCSLSGCVHEGNKCN---DIGWE 79
++ ES K R + IG G A+ L GC KCN D WE
Sbjct: 169 QDSLKESRKLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYADSAWE 221
>M.Javanica_Scaff523g007181 on AAW78153 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 23.1 bits (48), Expect = 9.6, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Query: 30 EEPCNESDKKCCRNLNCKNKKIGNGAVFAYKCSLSGCVHEGNKCN---DIGWE 79
++ ES K R + IG G A+ L GC KCN D WE
Sbjct: 169 QDSLKESRKLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYADSAWE 221
>M.Javanica_Scaff523g007181 on AAW78169 TRAP (Invasion) [Plasmodium falciparum]
Length = 551
Score = 23.1 bits (48), Expect = 9.6, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Query: 30 EEPCNESDKKCCRNLNCKNKKIGNGAVFAYKCSLSGCVHEGNKCN---DIGWE 79
++ ES K R + IG G A+ L GC KCN D WE
Sbjct: 169 QDSLKESRKLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYADSAWE 221
>M.Javanica_Scaff523g007181 on AAW78137 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 23.1 bits (48), Expect = 9.7, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Query: 30 EEPCNESDKKCCRNLNCKNKKIGNGAVFAYKCSLSGCVHEGNKCN---DIGWE 79
++ ES K R + IG G A+ L GC KCN D WE
Sbjct: 169 QDSLKESRKLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYADSAWE 221
>M.Javanica_Scaff523g007181 on AAW78164 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 23.1 bits (48), Expect = 9.9, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 14/32 (43%), Gaps = 3/32 (9%)
Query: 51 IGNGAVFAYKCSLSGCVHEGNKCN---DIGWE 79
IG G A+ L GC KCN D WE
Sbjct: 190 IGQGINVAFNRFLVGCHPSDGKCNLYADSAWE 221
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6956g046146
(319 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351221 CTRP (Adhesin) [Plasmodium falciparum] 34 0.012
XP_815156 Trans-sialidase (Invasion) [Trypanosoma cruzi] 32 0.036
ABR92024 MSA-1 (Invasion) [Babesia bovis] 32 0.038
XP_802427 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.17
XP_814219 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.20
XP_806989 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.55
XP_820186 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.66
XP_804289 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 1.2
XP_802771 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.5
AAL15426 MSA-2a2 (Invasion) [Babesia bovis] 27 1.8
XP_820135 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.7
XP_001610197 variant erythrocyte surface antigen-1, beta subuni... 26 4.2
AAL15427 MSA-2b (Invasion) [Babesia bovis] 25 4.7
AAY44833 MSA-1 (Invasion) [Babesia bovis] 25 5.2
XP_813586 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 5.8
XP_818893 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 7.0
XP_818892 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 7.3
XP_804569 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 8.9
AAY44834 MSA-1 (Invasion) [Babesia bovis] 24 9.7
>M.Javanica_Scaff6956g046146 on XP_001351221 CTRP (Adhesin) [Plasmodium falciparum]
Length = 2112
Score = 33.9 bits (76), Expect = 0.012, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 12/75 (16%)
Query: 238 PGGPGLPGPNGPNGADATTSAPDNGNNPGPGGPGGNGP--PGQNGPNGPNGADATTSAPD 295
PG P P P + S P + + PG P + P P ++ P P + S P
Sbjct: 763 PGSPSESTPGSP-----SESTPGSPSESTPGSPSESTPGNPSESTPGSP-----SESTPG 812
Query: 296 NGNNPGPGGPGGNGP 310
N + PG P + P
Sbjct: 813 NPSESTPGSPSESTP 827
Score = 33.9 bits (76), Expect = 0.014, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 36/92 (39%), Gaps = 17/92 (18%)
Query: 219 VPPITTTEATTTILSPGGQPGGPGLPGPNGPNGADATTSAPDNGNNPGPGGPGGNGPPGQ 278
+PP + +E+T PG P P P+ + + + NP PG P +
Sbjct: 761 LPPGSPSEST---------PGSPSESTPGSPSESTPGSPSESTPGNPSESTPGS---PSE 808
Query: 279 NGPNGPNGADATTSAPDNGNNPGPGGPGGNGP 310
+ P P + S P + + PG P + P
Sbjct: 809 STPGNP-----SESTPGSPSESTPGSPSESTP 835
Score = 28.9 bits (63), Expect = 0.51, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
Query: 260 DNGNNPGPGGPGGNGP--PGQNGPNGPNGA---DATTSAPDNGNNPGPGGPGGNGP 310
DNG PG P + P P ++ P P+ + + S P N + PG P + P
Sbjct: 756 DNGVVLPPGSPSESTPGSPSESTPGSPSESTPGSPSESTPGNPSESTPGSPSESTP 811
>M.Javanica_Scaff6956g046146 on XP_815156 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 966
Score = 32.3 bits (72), Expect = 0.036, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 33/83 (39%), Gaps = 5/83 (6%)
Query: 224 TTEATTTILSPGGQPGGPGLPGPNGPNGADATTSAPDNGNNPGPGGPGGNGPPGQNGPNG 283
+ + T T S G Q LP +G ++ + + NP G GG+ G P
Sbjct: 806 SAKTTMTTHSVGSQ-SAEQLPSGGSHDGNESVNADSSSDGNPAVGTVGGDTTQGNESPQI 864
Query: 284 PNG----ADATTSAPDNGNNPGP 302
P G ADA TS + GP
Sbjct: 865 PVGISDAADANTSTTEGEGQYGP 887
>M.Javanica_Scaff6956g046146 on ABR92024 MSA-1 (Invasion) [Babesia bovis]
Length = 330
Score = 32.0 bits (71), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
Query: 233 SPGGQPGGPGLPGPNGPNGADATTSAPDNGNNPGPGGPGGNGPPGQNGPN 282
SPGGQP P P P GA AT A + + P P GN Q P
Sbjct: 263 SPGGQPTAPAAPQP----GASATEPAQEPAPSTKPEQPAGNLSGQQGSPK 308
>M.Javanica_Scaff6956g046146 on XP_802427 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 390
Score = 30.0 bits (66), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 248 GPNGADATTSAP-DNGNNPGPGGPGGNGPPGQNGPNGP--NGADATTSAP-DNGNNPGPG 303
G + A +T S P DNG + P PG NG + P P NGA +T SAP DNG + P
Sbjct: 251 GDSSAHSTPSTPADNGAHSTPSAPGDNG--AHSTPLTPGDNGAHSTPSAPGDNGAHSTPL 308
Query: 304 GPGGNG 309
PG NG
Sbjct: 309 TPGDNG 314
Score = 26.9 bits (58), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 32/60 (53%), Gaps = 13/60 (21%)
Query: 248 GPNGADATTSAP-DNGNNPGPGGPGGNGP------PGQNG----PNGP--NGADATTSAP 294
G NGA +T SAP DNG + P PG NG PG NG P+ P NGA +T S P
Sbjct: 287 GDNGAHSTPSAPGDNGAHSTPLTPGDNGAHSTPSTPGDNGAHSTPSAPADNGAHSTPSTP 346
>M.Javanica_Scaff6956g046146 on XP_814219 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 958
Score = 30.0 bits (66), Expect = 0.20, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 31/87 (35%), Gaps = 5/87 (5%)
Query: 224 TTEATTTILSPGGQPGGPGLPGPNGPNGADATTSAPDNGNNPGPGGPGGNGPPGQNGPNG 283
+ + T T S G Q G + + + NGN P G GG+ G P
Sbjct: 799 SAKTTMTTHSVGSQSAEQLASGGSHDVNKNVNVDSSSNGN-PAVGTVGGDTKQGNGSPQI 857
Query: 284 PNGADATTSAPDNGNNPGPGGPGGNGP 310
P G T A N P G G GP
Sbjct: 858 PVGISDTADA----NTPTTEGEGQYGP 880
>M.Javanica_Scaff6956g046146 on XP_806989 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 922
Score = 28.5 bits (62), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 3/70 (4%)
Query: 206 VCKRDCASFCQAQVPPITTTEATTTILSPGGQPGGPGLPGPNGPNGADATTSAPDNGNNP 265
+ KR+ + A+VP TT + P P + P A TSAP + ++P
Sbjct: 691 LMKRNTVAAAAAKVPDQEVAAQTTNVSEPSRHPANVPVATPEAQQDA---TSAPRSQHSP 747
Query: 266 GPGGPGGNGP 275
+GP
Sbjct: 748 AQTSESESGP 757
>M.Javanica_Scaff6956g046146 on XP_820186 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1133
Score = 28.5 bits (62), Expect = 0.66, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 32/91 (35%), Gaps = 9/91 (9%)
Query: 229 TTILSPGGQPGGPGLPGPNGPNGADATTSAPD----NGNNPGPGGPGGNGP-PGQNGPNG 283
T+ + GG P P P GP A+ ++ P P P P P P +
Sbjct: 742 TSSVPSGGAPSTPAEPKSAGPKPAEPKSAGPKPAEPKSAEPKPAEPKSAEPKPAEPKSAE 801
Query: 284 PNGADATTSAPDNGNN----PGPGGPGGNGP 310
P A+ ++ P + P P P P
Sbjct: 802 PKPAEPKSAEPKPAESKSAEPKPAEPKSAEP 832
>M.Javanica_Scaff6956g046146 on XP_804289 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1048
Score = 27.7 bits (60), Expect = 1.2, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 4/42 (9%)
Query: 239 GGPGLPGPNGPNGADATTSAPDNGNNPGPGGPGGNGPPGQNG 280
GG P NG +AP+N N PGG G P G
Sbjct: 960 GGAEFPVENGEEVPQTVDTAPENTNTT----PGGEGIPSTKG 997
>M.Javanica_Scaff6956g046146 on XP_802771 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 341
Score = 26.9 bits (58), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 35/80 (43%), Gaps = 11/80 (13%)
Query: 241 PGLPGPNGPNG---------ADATTSAP-DNGNNPGPGGPGGNGPPGQNGPNGPNGADAT 290
P PG NG + A +T S P D+ + P P NG G NGA +T
Sbjct: 162 PSTPGDNGAHSTPSTPADSSAHSTPSTPADSSAHSTPSTPADNGAHSTPSTPGDNGAHST 221
Query: 291 TSAP-DNGNNPGPGGPGGNG 309
S P DNG + P PG NG
Sbjct: 222 PSTPADNGAHSTPSTPGDNG 241
Score = 26.2 bits (56), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Query: 250 NGADATTSAP-DNGNNPGPGGPGGNGPPGQNGPNGP--NGADATTSAP-DNGNNPGPGGP 305
+ A +T S P DNG + P PG NG + P+ P NGA +T S P DNG + P P
Sbjct: 192 SSAHSTPSTPADNGAHSTPSTPGDNG--AHSTPSTPADNGAHSTPSTPGDNGAHSTPSTP 249
Query: 306 G 306
Sbjct: 250 A 250
Score = 24.3 bits (51), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Query: 210 DCASFCQAQVPPITTTEATTTILSPGGQPGGPGLPGPNGPNGADATTSAP-DNGNNPGPG 268
D ++ P ++ +T + + G P PG NG A +T S P DNG + P
Sbjct: 179 DSSAHSTPSTPADSSAHSTPSTPADNGAHSTPSTPGDNG---AHSTPSTPADNGAHSTPS 235
Query: 269 GPGGNG 274
PG NG
Sbjct: 236 TPGDNG 241
>M.Javanica_Scaff6956g046146 on AAL15426 MSA-2a2 (Invasion) [Babesia bovis]
Length = 281
Score = 26.6 bits (57), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 29/76 (38%), Gaps = 13/76 (17%)
Query: 218 QVPPITTTEATTTILSPGGQPGGPGLPGPNGPNGADATTSAPDNGNNPGPGGP---GGNG 274
+ P IT + +T +PG QP P P+ P ++PGP P +
Sbjct: 199 KSPSITPSPIPSTQGTPGAQPAAPNTSQPDTPAA----------QSHPGPAAPSTTSADQ 248
Query: 275 PPGQNGPNGPNGADAT 290
PP P G+ T
Sbjct: 249 PPKPAETPKPTGSSFT 264
>M.Javanica_Scaff6956g046146 on XP_820135 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1519
Score = 26.6 bits (57), Expect = 2.7, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 33/109 (30%), Gaps = 16/109 (14%)
Query: 217 AQVPPITTTEATTTILSPGGQPGGPGLPGPNGPNGADATTSAPDNGNNPGPGGPG----- 271
A+ P A P P P P GP A+ ++ P P GP
Sbjct: 1116 AESKPAEPKSAEPKPAEPKPAEPKPAEPKPAGPKPAEQKSAEP-KPTEPKSAGPKPAEQK 1174
Query: 272 ------GNGPPGQNGPNGPNGADATTSAPDNGNNPGPGGPGGNGPPEHK 314
P + P GP A+ + P P P G P E K
Sbjct: 1175 SAESKPAEPKPAEPKPAGPKPAEPKPAEP----KPAEPKPAGPKPAEQK 1219
>M.Javanica_Scaff6956g046146 on XP_001610197 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1123
Score = 25.8 bits (55), Expect = 4.2, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 27/79 (34%), Gaps = 11/79 (13%)
Query: 246 PNGPNGADATTSAPDNGNNPGPGGPGGNGPPGQN-----------GPNGPNGADATTSAP 294
PN NG + G G G G+G P Q+ G +G D
Sbjct: 646 PNQNNGQSNKCNCLGEGATQGKAGTPGDGSPLQSFLCDSINGMHCGITTGSGVDRYPPIE 705
Query: 295 DNGNNPGPGGPGGNGPPEH 313
D+ N P GPP+H
Sbjct: 706 DHMNCPAGTVGHFGGPPKH 724
>M.Javanica_Scaff6956g046146 on AAL15427 MSA-2b (Invasion) [Babesia bovis]
Length = 287
Score = 25.4 bits (54), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 63/181 (34%), Gaps = 47/181 (25%)
Query: 96 EYDFVFLTFRDLLDQCQTNASVCPIRDPNPDFNRILNS-----FWLGMHRIQQYTSICQG 150
EY F+ LL++ V I+ +FN LN G ++ +Y
Sbjct: 104 EYQDTDQVFKSLLER------VLLIKKMLSEFNAFLNDNPPHLLTNGRDKMTKY------ 151
Query: 151 CSVDSEIVYVNSDGTPYNFGTYNADRAVLEDCTQLLDSETGKWNDIPCHYQQAAVVCKRD 210
I +SD Y F +++ C LDSE+ + I + + K+
Sbjct: 152 --YKKHISAKDSDVKDYTF--------LVKFCNDYLDSESP-FMKIYKAFNTYEELVKKS 200
Query: 211 CASFCQAQVPPITTTEATTTILSPGGQPGGPGLPGPNGPNGADATTSAPDNGNNPGPGGP 270
P IT + +T +PG QP P P+ P ++PGP P
Sbjct: 201 ---------PSITPSPIPSTQGTPGAQPAAPNTSQPDTPAA----------QSHPGPAAP 241
Query: 271 G 271
Sbjct: 242 S 242
>M.Javanica_Scaff6956g046146 on AAY44833 MSA-1 (Invasion) [Babesia bovis]
Length = 273
Score = 25.0 bits (53), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 8/57 (14%)
Query: 258 APDNGNNP------GPGGPGGNGP--PGQNGPNGPNGADATTSAPDNGNNPGPGGPG 306
AP G++P GP GP P P P GP ++ + GN GP P
Sbjct: 207 APGGGHSPEARPSEGPAGPSATQPRTPESPSPQGPPAESSSQAEQPAGNLNGPSKPA 263
>M.Javanica_Scaff6956g046146 on XP_813586 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1748
Score = 25.4 bits (54), Expect = 5.8, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 35/104 (33%), Gaps = 11/104 (10%)
Query: 216 QAQVPPITT--------TEATTTILSPGGQPGGPGLPGPNGPNGADATTSAPDNGNNPGP 267
Q VPP T T T+ + GG P P P P A+ + P P P
Sbjct: 721 QPTVPPPATAGPQQTDQTTLNTSSVPSGGAASTPAEPKPAEPKPAEPKPAEPKPA-EPKP 779
Query: 268 GGPGGNGP-PGQNGPNGPNGADATTSAPDNGNNPGPGGPGGNGP 310
P P P + P P A+ + P P P P P
Sbjct: 780 AEPKPAEPKPAEPKPAEPKPAEPKPAEPKPA-EPKPAEPKPAEP 822
>M.Javanica_Scaff6956g046146 on XP_818893 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 956
Score = 25.0 bits (53), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 32/87 (36%), Gaps = 5/87 (5%)
Query: 224 TTEATTTILSPGGQPGGPGLPGPNGPNGADATTSAPDNGNNPGPGGPGGNGPPGQNGPNG 283
+ + T T S GGQ G + + + NGN P G GG+ G P
Sbjct: 797 SAKTTMTTHSVGGQSAEQLASGGSHDVNKNVNVDSSSNGN-PAVGTVGGDTKQGNGSPQI 855
Query: 284 PNGADATTSAPDNGNNPGPGGPGGNGP 310
P G T A N P G G GP
Sbjct: 856 PVGISDTADA----NTPTTEGEGQYGP 878
>M.Javanica_Scaff6956g046146 on XP_818892 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 956
Score = 25.0 bits (53), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 32/87 (36%), Gaps = 5/87 (5%)
Query: 224 TTEATTTILSPGGQPGGPGLPGPNGPNGADATTSAPDNGNNPGPGGPGGNGPPGQNGPNG 283
+ + T T S GGQ G + + + NGN P G GG+ G P
Sbjct: 797 SAKTTMTTHSVGGQSAEQLASGGSHDVNKNVNVDSSSNGN-PAVGTVGGDTKQGNGSPQI 855
Query: 284 PNGADATTSAPDNGNNPGPGGPGGNGP 310
P G T A N P G G GP
Sbjct: 856 PVGISDTADA----NTPTTEGEGQYGP 878
>M.Javanica_Scaff6956g046146 on XP_804569 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 689
Score = 24.6 bits (52), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 3/70 (4%)
Query: 206 VCKRDCASFCQAQVPPITTTEATTTILSPGGQPGGPGLPGPNGPNGADATTSAPDNGNNP 265
+ KR+ + A+VP TT + P P + P A TSAP + ++P
Sbjct: 435 LMKRNTVAAAAAKVPAQEVAAQTTNVSEPSRHPANVPVVTPEAQQDA---TSAPRSQHSP 491
Query: 266 GPGGPGGNGP 275
+GP
Sbjct: 492 AQTSESESGP 501
>M.Javanica_Scaff6956g046146 on AAY44834 MSA-1 (Invasion) [Babesia bovis]
Length = 320
Score = 24.3 bits (51), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 10/64 (15%)
Query: 252 ADATTSAPDNGNNPGPGG--------PGGNGPPGQNGPNGPNGADATTSAPDN--GNNPG 301
A+ +P G++P P P + PG G P A S+P++ GN G
Sbjct: 243 AEEINRSPGTGSDPHPPADGQAQQETPAPSSQPGPTGAQSPQTQGAENSSPESTPGNLSG 302
Query: 302 PGGP 305
P GP
Sbjct: 303 PKGP 306
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2713g024762
(323 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_820141 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.6
>M.Javanica_Scaff2713g024762 on XP_820141 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 925
Score = 26.6 bits (57), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 179 INLIGYKIELLQKQKVEYPKEVLKSRIIYIGSEIRGIIEGNKR 221
++ G +LL K+ E P+EVLK + G EG K+
Sbjct: 115 VSFTGVASQLLTKKAAETPEEVLKESKDWTKVLEEGASEGQKK 157
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5542g039921
(102 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum] 25 1.1
XP_001349033 PfEMP1 (Establishment) [Plasmodium falciparum] 23 5.9
>M.Javanica_Scaff5542g039921 on XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2980
Score = 25.0 bits (53), Expect = 1.1, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Query: 20 ELLN--KENNIAESIIDFGAKTCTLAFEC 46
+L+N KE N+++S+I G KTC +C
Sbjct: 1456 QLVNVCKECNVSDSVISSGNKTCNDKEKC 1484
>M.Javanica_Scaff5542g039921 on XP_001349033 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2064
Score = 22.7 bits (47), Expect = 5.9, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 12/19 (63%), Gaps = 3/19 (15%)
Query: 73 GLHN---KSGKGKCRCKEG 88
G HN +S KG+CRC G
Sbjct: 267 GPHNHITESNKGQCRCFSG 285
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4551g035180
(109 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_845137 VSG (Establishment) [Trypanosoma brucei] 25 1.7
XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum] 24 2.7
XP_804432 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 6.2
XP_802364 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 9.4
>M.Javanica_Scaff4551g035180 on XP_845137 VSG (Establishment) [Trypanosoma brucei]
Length = 485
Score = 24.6 bits (52), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Query: 56 RCGIHTILMPYTMTKAWNK-VDKDLTK 81
RCG+H I+ P TK + D +L K
Sbjct: 153 RCGVHPIVTPPANTKCNTEPADSELNK 179
>M.Javanica_Scaff4551g035180 on XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3119
Score = 23.9 bits (50), Expect = 2.7, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 7 SASAGILTSMLSRVLETPPLNNCAI 31
S +G+ T+ S V TPP N+ AI
Sbjct: 1906 SGGSGVTTTAGSSVTTTPPSNSGAI 1930
>M.Javanica_Scaff4551g035180 on XP_804432 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 799
Score = 22.7 bits (47), Expect = 6.2, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 60 HTILMPYTMTKAWNKVDKDLTKNFT 84
HT+ + YT K W + K TK T
Sbjct: 601 HTMGILYTANKTWETISKGETKPTT 625
>M.Javanica_Scaff4551g035180 on XP_802364 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 327
Score = 22.3 bits (46), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Query: 60 HTILMPYTMTKAWNKVDKDLTK----NFTLKIVNKYQDAF 95
HT+ + YT K W + K TK + T ++ +YQ A
Sbjct: 120 HTMGILYTANKTWETISKGETKPTTESGTWELKKEYQVAL 159
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7704g049138
(212 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAC43441 eIF4A (Others) [Toxoplasma gondii] 26 1.8
AAW78160 TRAP (Invasion) [Plasmodium falciparum] 26 2.0
AAW78131 TRAP (Invasion) [Plasmodium falciparum] 26 2.0
AAW78167 TRAP (Invasion) [Plasmodium falciparum] 26 2.3
AAW78156 TRAP (Invasion) [Plasmodium falciparum] 25 2.6
AAW78134 TRAP (Invasion) [Plasmodium falciparum] 25 3.5
AAW78169 TRAP (Invasion) [Plasmodium falciparum] 25 3.6
AAW78171 TRAP (Invasion) [Plasmodium falciparum] 25 3.7
AAK31241 variable surface protein 42c (Establishment) [Giardi... 23 7.6
>M.Javanica_Scaff7704g049138 on CAC43441 eIF4A (Others) [Toxoplasma gondii]
Length = 255
Score = 25.8 bits (55), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 14 INVALIFPDYPKDCPELTTKPPKKPKN 40
+ VAL P+D ELTTK + PK
Sbjct: 213 VQVALFSATMPQDILELTTKFMRDPKR 239
>M.Javanica_Scaff7704g049138 on AAW78160 TRAP (Invasion) [Plasmodium falciparum]
Length = 557
Score = 25.8 bits (55), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 35 PKKPKNPKHPSNPKKPNPPIN 55
P+ P NP++PSNP+ P+ P N
Sbjct: 349 PENPSNPENPSNPENPSNPEN 369
Score = 25.0 bits (53), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 35 PKKPKNPKHPSNPKKPNPP 53
P+ P NP++PSNP+ P+ P
Sbjct: 355 PENPSNPENPSNPENPSNP 373
>M.Javanica_Scaff7704g049138 on AAW78131 TRAP (Invasion) [Plasmodium falciparum]
Length = 557
Score = 25.8 bits (55), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 35 PKKPKNPKHPSNPKKPNPPINDRN 58
P+ P NP++PSNP+ P+ P N N
Sbjct: 349 PENPSNPENPSNPENPSNPENPSN 372
Score = 25.0 bits (53), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 35 PKKPKNPKHPSNPKKPNPP 53
P+ P NP++PSNP+ P+ P
Sbjct: 355 PENPSNPENPSNPENPSNP 373
>M.Javanica_Scaff7704g049138 on AAW78167 TRAP (Invasion) [Plasmodium falciparum]
Length = 575
Score = 25.8 bits (55), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 35 PKKPKNPKHPSNPKKPNPPINDRN 58
P+ P NP++PSNP+ P+ P N N
Sbjct: 349 PENPSNPENPSNPENPSNPENPSN 372
Score = 25.8 bits (55), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 35 PKKPKNPKHPSNPKKPNPPINDRN 58
P+ P NP++PSNP+ P+ P N N
Sbjct: 355 PENPSNPENPSNPENPSNPENPSN 378
>M.Javanica_Scaff7704g049138 on AAW78156 TRAP (Invasion) [Plasmodium falciparum]
Length = 581
Score = 25.4 bits (54), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 35 PKKPKNPKHPSNPKKPNPPINDRN 58
P+ P NP++PSNP+ P+ P N N
Sbjct: 349 PENPSNPENPSNPENPSNPENPSN 372
Score = 25.4 bits (54), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 35 PKKPKNPKHPSNPKKPNPPINDRN 58
P+ P NP++PSNP+ P+ P N N
Sbjct: 355 PENPSNPENPSNPENPSNPENPSN 378
Score = 25.4 bits (54), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 35 PKKPKNPKHPSNPKKPNPPINDRN 58
P+ P NP++PSNP+ P+ P N N
Sbjct: 361 PENPSNPENPSNPENPSNPENPSN 384
>M.Javanica_Scaff7704g049138 on AAW78134 TRAP (Invasion) [Plasmodium falciparum]
Length = 551
Score = 25.0 bits (53), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 35 PKKPKNPKHPSNPKKPNPP 53
P+ P NP++PSNP+ P+ P
Sbjct: 349 PENPSNPENPSNPENPSNP 367
>M.Javanica_Scaff7704g049138 on AAW78169 TRAP (Invasion) [Plasmodium falciparum]
Length = 551
Score = 25.0 bits (53), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 35 PKKPKNPKHPSNPKKPNPP 53
P+ P NP++PSNP+ P+ P
Sbjct: 349 PENPSNPENPSNPENPSNP 367
>M.Javanica_Scaff7704g049138 on AAW78171 TRAP (Invasion) [Plasmodium falciparum]
Length = 551
Score = 25.0 bits (53), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 35 PKKPKNPKHPSNPKKPNPP 53
P+ P NP++PSNP+ P+ P
Sbjct: 349 PENPSNPENPSNPENPSNP 367
>M.Javanica_Scaff7704g049138 on AAK31241 variable surface protein 42c (Establishment) [Giardia
duodenalis]
Length = 128
Score = 23.5 bits (49), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 11/75 (14%)
Query: 131 ESCFKDKRYVL-NDPICMSKCVKI---TYKCVGCSTAKTLTVPINNKCPECAINHVDLST 186
++C + Y N P C C K T C C L+ N+KC +C+ N D +
Sbjct: 7 QTCANGQTYASGNCPTCAEGCAKCQSSTSTCTECLAGYYLS---NSKCVKCSENSADGNI 63
Query: 187 ----NAFNYLEPKGG 197
N + EP GG
Sbjct: 64 KGVPNCVSCKEPSGG 78
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff28466g095116
(332 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351221 CTRP (Adhesin) [Plasmodium falciparum] 35 0.007
XP_001351876 PfEMP1 (Establishment) [Plasmodium falciparum] 26 4.2
XP_808396 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.3
XP_809996 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 8.5
>M.Javanica_Scaff28466g095116 on XP_001351221 CTRP (Adhesin) [Plasmodium falciparum]
Length = 2112
Score = 34.7 bits (78), Expect = 0.007, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 7/53 (13%)
Query: 72 NGHEMEYSMQHEMYNPKPRSKPKQKTTPVQEPSPSQPAPVQQQSPDPVQPPQP 124
N +E E NP + P++ PV++P+P +++P+PV+ P+P
Sbjct: 505 NPEPVEKPNPEENPNPVEKPTPEENPNPVEKPTP-------EENPNPVEKPEP 550
Score = 26.6 bits (57), Expect = 2.5, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Query: 45 KTKQQIPKKSAMKMRKFTQSFNHVSTPNGHE----MEYSMQHEMYNPKPRSKPKQKTTPV 100
K +I ++++ K ++ V PN E +E E NP + P++ PV
Sbjct: 486 KILTKICNTGSVELPKPEENPEPVEKPNPEENPNPVEKPTPEENPNPVEKPTPEENPNPV 545
Query: 101 QEPSPSQ 107
++P P +
Sbjct: 546 EKPEPEK 552
>M.Javanica_Scaff28466g095116 on XP_001351876 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3164
Score = 25.8 bits (55), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 6/47 (12%)
Query: 95 QKTTPVQEPSPSQPAPVQQQSPDPVQPPQPAPWDKKELVEHVIAAYK 141
+K TP ++ PSQPA + Q+ +P P + A L E +A+ K
Sbjct: 1975 KKKTPSRKTQPSQPAR-EMQADEPASPSRRAS-----LKEKAVASKK 2015
>M.Javanica_Scaff28466g095116 on XP_808396 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 786
Score = 25.4 bits (54), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 12/81 (14%)
Query: 86 NPKPRSKPKQKTTPVQEPSP-SQPAPVQQQSPDPVQPPQ---PAPWDKKELVEHVI---- 137
NP + K++ PV + +P SQ V Q V P+ AP +L H +
Sbjct: 682 NPTEMTAIKERI-PVPKRAPESQAGGVPQTIASAVSGPEKNSAAPAVPMKLDSHAVEEVS 740
Query: 138 ---AAYKNSCKSSDIVIFSPE 155
AA KN+ ++ D+ F PE
Sbjct: 741 EGGAAKKNTSRTEDVQFFVPE 761
>M.Javanica_Scaff28466g095116 on XP_809996 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 787
Score = 24.6 bits (52), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 12/81 (14%)
Query: 86 NPKPRSKPKQKTTPVQEPSP-SQPAPVQQQSPDPVQPPQ---PAPWDKKELVEHVI---- 137
NP + K++ PV + +P SQ V Q V P+ AP +L H +
Sbjct: 683 NPTEMTAIKERI-PVPKRAPESQAGGVPQTIASAVSGPEKNSAAPAVPMKLDSHAVEEVS 741
Query: 138 ---AAYKNSCKSSDIVIFSPE 155
AA KN+ ++ D+ F PE
Sbjct: 742 EGGAAKKNTSRTEDVQFFVPE 762
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7415g048009
(94 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6444g043953
(423 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609450 variant erythrocyte surface antigen-1, alpha subun... 25 8.8
>M.Javanica_Scaff6444g043953 on XP_001609450 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1309
Score = 25.4 bits (54), Expect = 8.8, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 23 GNVTINLNEKRQVIDGFGASTAWQGAVSDQIMNELFGTLGYS 64
GNVT LNE ++ G G + + + DQ+ L +G+S
Sbjct: 83 GNVTERLNELFSLVQGLGGTAVVRTYI-DQLAQVLSALVGWS 123
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4621g035510
(55 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349219 PfEMP1 (Establishment) [Plasmodium falciparum] 22 3.7
>M.Javanica_Scaff4621g035510 on XP_001349219 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2595
Score = 21.6 bits (44), Expect = 3.7, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
Query: 27 NCRTHRAVSNDTKIN---KIRLDWTEIQ 51
+C+ + S DTK+N K +D TEI+
Sbjct: 1396 DCKNGKCKSGDTKVNCNRKNTIDATEIE 1423
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3254g028083
(241 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609034 variant erythrocyte surface antigen-1, alpha subun... 25 6.7
>M.Javanica_Scaff3254g028083 on XP_001609034 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1313
Score = 24.6 bits (52), Expect = 6.7, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 175 ELKRLLRSDLDAVNVRWEVVSIDEMERADNETPQEL 210
+L +LR LD VN + + + E+AD ET Q L
Sbjct: 712 DLSGVLREVLDKVNEKVKELEKVVTEKADGETSQAL 747
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4802g036388
(264 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_820072 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.97
XP_001350413 PfEMP1 (Establishment) [Plasmodium falciparum] 27 2.1
>M.Javanica_Scaff4802g036388 on XP_820072 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 755
Score = 27.3 bits (59), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 32 PQATKTVKQSTTIPVSGTKDFGYVRLVATSALRSACSIKGSVNGKNIIEVEDGGTVKNVI 91
PQ T + + T+PV+ F LV+ + +A + +G V +N + + G+ +V+
Sbjct: 89 PQMTLVLPKDGTVPVTTRDSFATPSLVSAGGVIAAFA-EGHVKAQNTADAQLDGSSPDVV 147
Query: 92 IG--DGAKG 98
G D A G
Sbjct: 148 AGYIDSAWG 156
>M.Javanica_Scaff4802g036388 on XP_001350413 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2860
Score = 26.6 bits (57), Expect = 2.1, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 202 NTNLGDKMSISNV---FVDNSISFLCQEYRGIRGIISEMRPTSECKPNENCAKTS 253
NT+ +K + +NV + D+ L YR I +++ + ++CK EN K S
Sbjct: 401 NTSTTNKRTNNNVNVMYYDDFYKELQGRYRTINELLNSLNEETKCKSTENTDKES 455
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7314g047584
(109 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_847559 VSG (Establishment) [Trypanosoma brucei] 29 0.048
XP_847561 VSG (Establishment) [Trypanosoma brucei] 29 0.053
XP_820663 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.20
XP_843648 VSG (Establishment) [Trypanosoma brucei] 26 0.69
XP_804506 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 7.3
XP_001349036 PfEMP1 (Establishment) [Plasmodium falciparum] 23 7.4
XP_001349035 PfEMP1 (Establishment) [Plasmodium falciparum] 23 7.5
XP_829787 VSG (Establishment) [Trypanosoma brucei] 22 8.8
XP_804812 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 9.2
>M.Javanica_Scaff7314g047584 on XP_847559 VSG (Establishment) [Trypanosoma brucei]
Length = 361
Score = 28.9 bits (63), Expect = 0.048, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 61 RRKRHREDAQRRWNFQSSPSTTTHGGSANTAQI 93
R R R DAQ+RWNF S + G A++
Sbjct: 221 RVWRPRNDAQKRWNFLVSQCSNVEGHKEGFAKL 253
>M.Javanica_Scaff7314g047584 on XP_847561 VSG (Establishment) [Trypanosoma brucei]
Length = 361
Score = 28.9 bits (63), Expect = 0.053, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 64 RHREDAQRRWNFQSSPSTTTHGGSANTAQI 93
R R DAQ+RWNF S + G A++
Sbjct: 224 RPRNDAQKRWNFLVSQCSNVEGHKEGFAKL 253
>M.Javanica_Scaff7314g047584 on XP_820663 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 928
Score = 27.3 bits (59), Expect = 0.20, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 77 SSPSTTTHGGSANTAQIQLTASKGGSGEIN 106
S+PST T G + Q L AS GGS +++
Sbjct: 772 SAPSTVTTSGEESVKQSALRASPGGSKQVD 801
>M.Javanica_Scaff7314g047584 on XP_843648 VSG (Establishment) [Trypanosoma brucei]
Length = 524
Score = 25.8 bits (55), Expect = 0.69, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 43 IAASSTRRVQGVDLEAIERRKRHREDAQRRWNFQSSPSTTTHGGSANTAQIQLTASKG 100
+AASS EA+E +K+ E ++ + S P T SA+ + + A+K
Sbjct: 388 VAASSPSHPSKPATEAVEVQKKECEAIEKDTDCDSKPYCTYQKDSADDKKCKFNATKA 445
>M.Javanica_Scaff7314g047584 on XP_804506 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1012
Score = 22.7 bits (47), Expect = 7.3, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 68 DAQRRWNFQSSPSTTTHGG 86
+++++WN +SPS + GG
Sbjct: 360 NSEKKWNSFASPSLVSAGG 378
>M.Javanica_Scaff7314g047584 on XP_001349036 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2192
Score = 22.7 bits (47), Expect = 7.4, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 14/34 (41%)
Query: 71 RRWNFQSSPSTTTHGGSANTAQIQLTASKGGSGE 104
RR +P T GG NT + T G S E
Sbjct: 969 RRRRLYVTPLTRLAGGDGNTQAGETTQGNGASTE 1002
>M.Javanica_Scaff7314g047584 on XP_001349035 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2239
Score = 22.7 bits (47), Expect = 7.5, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 14/34 (41%)
Query: 71 RRWNFQSSPSTTTHGGSANTAQIQLTASKGGSGE 104
RR +P T GG NT + T G S E
Sbjct: 920 RRRRLYVTPLTRLAGGDGNTQAGETTQGNGASTE 953
>M.Javanica_Scaff7314g047584 on XP_829787 VSG (Establishment) [Trypanosoma brucei]
Length = 426
Score = 22.3 bits (46), Expect = 8.8, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 77 SSPSTTTHGGSANTAQIQLTASKGGSGE 104
S+P++ G S + L A+ GG+GE
Sbjct: 191 SNPTSQNSGASLAADFVCLCAANGGNGE 218
>M.Javanica_Scaff7314g047584 on XP_804812 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 506
Score = 22.3 bits (46), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 68 DAQRRWNFQSSPSTTTHGG 86
+++++WN +SPS + GG
Sbjct: 100 NSEKKWNSFASPSLVSAGG 118
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4111g032921
(540 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350409 PfEMP1 (Establishment) [Plasmodium falciparum] 29 0.90
ABR92030 MSA-1 (Invasion) [Babesia bovis] 28 1.6
XP_806556 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.8
XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum] 27 3.0
AAL15427 MSA-2b (Invasion) [Babesia bovis] 27 4.0
XP_812613 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 5.0
XP_821902 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 5.1
XP_821910 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 5.6
XP_817382 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 7.0
XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum] 26 7.1
AAQ63567 MAHRP1 (Others) [Plasmodium falciparum] 25 8.5
>M.Javanica_Scaff4111g032921 on XP_001350409 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2223
Score = 28.9 bits (63), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Query: 220 EPPFLAQEQQVPPPVQPPPAQQAPPPVQPPSAQ 252
+ P L E++ PPP Q P PP + P+ Q
Sbjct: 1724 QTPVLKPEEEAPPPAQAP---DVAPPARAPADQ 1753
>M.Javanica_Scaff4111g032921 on ABR92030 MSA-1 (Invasion) [Babesia bovis]
Length = 328
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 24/65 (36%), Gaps = 10/65 (15%)
Query: 222 PFLAQEQQVPPPVQP----------PPAQQAPPPVQPPSAQQASIQSSSPPPQTSMPPAT 271
P Q QQV P VQP PA PV+ P+ Q SS P +S
Sbjct: 255 PEAEQTQQVTPAVQPSKPTTGKPTEDPAASGSSPVERPAGNLTGQQDSSKPAGSSFTFGG 314
Query: 272 TTAQT 276
T T
Sbjct: 315 LTVAT 319
>M.Javanica_Scaff4111g032921 on XP_806556 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 844
Score = 27.3 bits (59), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 222 PFLAQEQQVPPPVQ-PPPAQQAPPPVQPPSAQQASIQSSSPPPQTSMPPATTTAQTST 278
PF+A+ Q PP + PP A +Q P + +++ T+ TT+Q S
Sbjct: 745 PFVARNQNAAPPAKIPPEAPVGQTTLQQPQHEGKGQNATAEESATTQEVPATTSQGSV 802
>M.Javanica_Scaff4111g032921 on XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3346
Score = 27.3 bits (59), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Query: 233 PVQPP---PAQQAPPPVQPPSAQQASIQSSSPPPQT 265
P Q P P ++APP +PP + +S P P++
Sbjct: 2820 PEQTPILKPEEEAPPKSKPPDGDRGVGRSLGPTPRS 2855
>M.Javanica_Scaff4111g032921 on AAL15427 MSA-2b (Invasion) [Babesia bovis]
Length = 287
Score = 26.6 bits (57), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Query: 236 PPPAQQAPPPVQPPSAQQASIQSSSPPPQTS---MPPATTTAQTSTRPKSTEFGNIRYP 291
P P+ Q P QP A + Q +P Q+ P+TT+A T+P T GN+ P
Sbjct: 207 PIPSTQGTPGAQP--AAPNTSQPDTPAAQSHPGPAAPSTTSADHPTKPTETPAGNLTGP 263
>M.Javanica_Scaff4111g032921 on XP_812613 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1038
Score = 26.6 bits (57), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 457 EILNNFSTTFGYTNFERTSTEGYSPSISPLNYKFSTKTIKTEEEKE----LITTTTSPSY 512
++++ +++FG T R +T S+ L +S K + E +KE L+ T S
Sbjct: 157 QLVDTAASSFGTTEVLRPTTVVIGNSVYMLLGNYSHKEKQVERKKERGLLLVKGTVSDEG 216
Query: 513 KIKNQKIKEEFVVKP--VKHSNTLTK 536
+K + E VV P + +S++LT+
Sbjct: 217 GMKKIRWNETHVVNPQGIGYSHSLTE 242
>M.Javanica_Scaff4111g032921 on XP_821902 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 854
Score = 26.6 bits (57), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 4/32 (12%)
Query: 222 PFLAQEQQVPPPVQPPPAQQAPPPVQPPSAQQ 253
PF+A+ Q PP PP PV+ + QQ
Sbjct: 754 PFVARNQNAAPPATIPP----EAPVEQTTLQQ 781
>M.Javanica_Scaff4111g032921 on XP_821910 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 853
Score = 26.2 bits (56), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 4/32 (12%)
Query: 222 PFLAQEQQVPPPVQPPPAQQAPPPVQPPSAQQ 253
PF+A+ Q PP PP PV+ + QQ
Sbjct: 754 PFVARNQNAAPPATIPP----EAPVEQTTLQQ 781
>M.Javanica_Scaff4111g032921 on XP_817382 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 836
Score = 25.8 bits (55), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Query: 222 PFLAQEQQVPPPVQ-PPPAQQAPPPVQPPSAQQASIQSSSPPPQTSMPPATTTAQTST 278
PF+A+ Q PP PP A +Q P + +++ T+ TT+Q S
Sbjct: 737 PFVARNQNAAPPATIPPEAPVGQTTLQQPQHEGKGQNATAEESATTQEVPATTSQGSV 794
>M.Javanica_Scaff4111g032921 on XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1711
Score = 25.8 bits (55), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 118 NSNHNHSPNRNLSPSLN--PSHNLSLNRSLSHNPSPSRNPSHNPSLNPNLS 166
N++ N +P+ N++PS N P+ ++ + LS PS + PS N +LN ++S
Sbjct: 1578 NNSGNINPSGNINPSGNTPPTSDIPSGK-LSDTPSDNNIPSSNKTLNTDVS 1627
>M.Javanica_Scaff4111g032921 on AAQ63567 MAHRP1 (Others) [Plasmodium falciparum]
Length = 338
Score = 25.4 bits (54), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Query: 1 MYYFKYLLF---LYLFLNLYGISKQKNY 25
+Y +L F + LF+N Y + K+K Y
Sbjct: 217 LYAVIFLFFVINILLFINFYNLGKRKGY 244
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5568g040047
(137 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_652967 Vps35 (Establishment) [Entamoeba histolytica] 25 1.7
>M.Javanica_Scaff5568g040047 on XP_652967 Vps35 (Establishment) [Entamoeba histolytica]
Length = 757
Score = 25.0 bits (53), Expect = 1.7, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 14/94 (14%)
Query: 55 EMLPRTPELIFVNLTTLEGQPHCLELTSKGWRVTSLRTDCMHGDFTKMEMFTNYYNSFNE 114
EM+ + L N + +E + HC++ +K R R + MF NYY F
Sbjct: 645 EMMCKIASLDIKNNSNVEDKEHCIDTLNKA-RKEIERIIDEEEKKKVLIMFVNYYIYFFP 703
Query: 115 LMNFISPK-----YSNLKEN--------XNIFTN 135
L++ I+ + +KEN IFTN
Sbjct: 704 LLDQITADQITQIITEIKENKEQLDDAQTTIFTN 737
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5224g038428
(105 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351221 CTRP (Adhesin) [Plasmodium falciparum] 24 2.1
XP_001349207 EBA-175 (Adhesin) [Plasmodium falciparum] 23 3.1
XP_829778 VSG (Establishment) [Trypanosoma brucei] 23 4.1
XP_001348153 MAEBL (Adhesin) [Plasmodium falciparum] 23 4.5
>M.Javanica_Scaff5224g038428 on XP_001351221 CTRP (Adhesin) [Plasmodium falciparum]
Length = 2112
Score = 24.3 bits (51), Expect = 2.1, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 1 MQLATENMNNRII----FTILLVISLKISSIVEGYPSTNFFDNNRLTSGL 46
M + MN+ +I + L+ISL+ S+ +G+ N ++ N L L
Sbjct: 1085 MDCSKNIMNSLVIDKNKVHVSLIISLEKKSVHQGFDDVNSYNKNELIKTL 1134
>M.Javanica_Scaff5224g038428 on XP_001349207 EBA-175 (Adhesin) [Plasmodium falciparum]
Length = 1462
Score = 23.5 bits (49), Expect = 3.1, Method: Composition-based stats.
Identities = 8/28 (28%), Positives = 19/28 (67%)
Query: 71 RSSNKRHLRGTREQQEEANVLNKRLHLA 98
R+SN HL+ R ++ E ++ N+ ++++
Sbjct: 1228 RNSNTLHLKDIRNEENERHLTNQNINIS 1255
>M.Javanica_Scaff5224g038428 on XP_829778 VSG (Establishment) [Trypanosoma brucei]
Length = 493
Score = 23.1 bits (48), Expect = 4.1, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 66 IGLGKRSSNKRHLRGTREQQEEANV 90
IG+GK + KRHL Q+ V
Sbjct: 49 IGVGKVADQKRHLEAALNAQKALTV 73
>M.Javanica_Scaff5224g038428 on XP_001348153 MAEBL (Adhesin) [Plasmodium falciparum]
Length = 2054
Score = 23.1 bits (48), Expect = 4.5, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 28/65 (43%)
Query: 28 VEGYPSTNFFDNNRLTSGLLNQLFEQQIVRRFDPAWRHIGLGKRSSNKRHLRGTREQQEE 87
V+ YP+ N ++ S +N F F P + I + + NK + ++ ++
Sbjct: 507 VKNYPNNNISYIQKVHSSFVNNRFNIHSDSSFKPIHKMIQMNIYTDNKLYNNNNQKIKDS 566
Query: 88 ANVLN 92
N +N
Sbjct: 567 NNNMN 571
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff446g006355
(80 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351080 PfEMP1 (Establishment) [Plasmodium falciparum] 24 1.2
XP_001349035 PfEMP1 (Establishment) [Plasmodium falciparum] 23 3.3
>M.Javanica_Scaff446g006355 on XP_001351080 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2209
Score = 24.3 bits (51), Expect = 1.2, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 57 PFRNVHWKAKDGENVNNRGRNN 78
PFR ++ ++ EN+NN G+ N
Sbjct: 119 PFRRLNLCVRNLENINNYGKIN 140
>M.Javanica_Scaff446g006355 on XP_001349035 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2239
Score = 22.7 bits (47), Expect = 3.3, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 48 EKNRIPLRDPFRNVHWKAKDGENVN 72
E +R+ PFR +H ++ EN+N
Sbjct: 111 EDDRVGACAPFRRLHLCVRNLENIN 135
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6023g042097
(60 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_846273 VSG (Establishment) [Trypanosoma brucei] 23 1.6
XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum] 23 1.6
XP_656181 Hgl2 (Adhesin) [Entamoeba histolytica] 21 8.1
>M.Javanica_Scaff6023g042097 on XP_846273 VSG (Establishment) [Trypanosoma brucei]
Length = 490
Score = 22.7 bits (47), Expect = 1.6, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 3/35 (8%)
Query: 8 FVSILFTILLFSNKFTEIFAAPKNPCVGKCNILER 42
F+++ F LF+ K E A PC C +R
Sbjct: 6 FITLAF---LFAQKVAETSADANKPCSTACGCKKR 37
>M.Javanica_Scaff6023g042097 on XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2858
Score = 22.7 bits (47), Expect = 1.6, Method: Composition-based stats.
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 21 KFTEIFAAPKNPCVGKCNI 39
KF E F + K P + +C+I
Sbjct: 1689 KFNETFWSKKKPSIEECDI 1707
>M.Javanica_Scaff6023g042097 on XP_656181 Hgl2 (Adhesin) [Entamoeba histolytica]
Length = 1286
Score = 20.8 bits (42), Expect = 8.1, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 13/20 (65%), Gaps = 2/20 (10%)
Query: 27 AAPKNPCVGKCNILERGDHC 46
A+ N C KCN +E G++C
Sbjct: 598 ASTGNQC--KCNKVENGNYC 615
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff26753g092798
(305 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAR88085 TbcatB (Cysteine proteases) [Trypanosoma brucei] 99 6e-25
P92132 CP2 (Cysteine protease) [Giardia duodenalis] 57 1e-10
XP_650937 CP5 (Cysteine protease) [Entamoeba histolytica] 48 2e-07
ABC02174 Falstatin (Others) [Plasmodium falciparum] 46 1e-06
XP_001347836 Falcipain 2 (Cysteine protease) [Plasmodium falc... 46 1e-06
XP_001347833 Falcipain 3 (Cysteine protease) [Plasmodium falc... 40 8e-05
AAX77225 Falcipain 2' (Cysteine protease) [Plasmodium falcipa... 40 1e-04
CAA38278 Cruzipain (Cysteine protease) [Trypanosoma cruzi] 37 1e-04
EAN83733 Cruzipain (Cysteine protease) [Trypanosoma cruzi] 35 5e-04
CAC67416 Brucipain (Cysteine proteases) [Trypanosoma brucei] 37 8e-04
AAS38514 CP65 (Cysteine protease) [Trichomonas vaginalis] 33 0.009
PF14_0553 Falcipain1 (Cysteine protease) [Plasmodium falciparum] 34 0.011
XP_650642 CP2 (Cysteine protease) [Entamoeba histolytica] 31 0.072
XP_650156 CP1 (Cysteine protease) [Entamoeba histolytica] 30 0.14
AAV98582 CP4 (Cysteine protease) [Trichomonas vaginalis] 30 0.15
CAA54438 CP1 (Cysteine protease) [Trichomonas vaginalis] 30 0.16
CAA54436 CP2 (Cysteine protease) [Trichomonas vaginalis] 30 0.19
AAA30134 SPAG-1 (Adhesion) [Theileria annulata] 30 0.21
CAJ20707 Toxopain-2 (Protease) [Toxoplasma gondii] 29 0.34
CAA54437 CP3 (Cysteine protease) [Trichomonas vaginalis] 28 0.56
>M.Javanica_Scaff26753g092798 on AAR88085 TbcatB (Cysteine proteases) [Trypanosoma brucei]
Length = 340
Score = 99.4 bits (246), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 128/290 (44%), Gaps = 46/290 (15%)
Query: 20 LSEAAAKPPPPPPCKFVTDFDARTNWPRCKDAINNVFAQADCDSCWAVSVASAYTDRYCI 79
+E A+ P P + FD+ WP C I + Q+ C SCWAV+ ASA +DR+C
Sbjct: 85 FTEEEARAPLP------SSFDSAEAWPNCP-TIPQIADQSACGSCWAVAAASAMSDRFCT 137
Query: 80 QRALKNLNTSSTDPHFRFSALDIMSCTYPLQDGCKAGGFPVDAWKFIQKKGVVTGTDYYQ 139
+++++ SA D+++C DGC GG P AW + G+V +DY
Sbjct: 138 MGGVQDVH---------ISAGDLLACCSDCGDGCN-GGDPDRAWAYFSSTGLV--SDY-- 183
Query: 140 NNGCRPYPYEPNKKASFKTR-----CSEGLLKKPKCTNSKWPTPYEKDKHYASSHTRWSG 194
C+PYP+ P+ K++ CS+ PKC N P +Y S W+
Sbjct: 184 ---CQPYPF-PHCSHHSKSKNGYPPCSQFNFDTPKC-NYTCDDPTIPVVNYRS----WTS 234
Query: 195 PKVK-ISDIQAEIKRNGPINANFFLSSDLLQRGRTDEPYIGNIKCTLFKPSNHVLEIVGW 253
++ D E+ GP F + D + ++ H + +VGW
Sbjct: 235 YALQGEDDYMRELFFRGPFEVAFDVYEDFIAYNSGVYHHVSGQYL-----GGHAVRLVGW 289
Query: 254 GRKICGKNVVPYWICKNSFGASWGNGGFFNVRMGYNDNCLENDGINFGLP 303
G N VPYW NS+ WG G+F +R G ++ C DG + G+P
Sbjct: 290 GT----SNGVPYWKIANSWNTEWGMDGYFLIRRGSSE-CGIEDGGSAGIP 334
>M.Javanica_Scaff26753g092798 on P92132 CP2 (Cysteine protease) [Giardia duodenalis]
Length = 255
Score = 57.4 bits (137), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 85/219 (38%), Gaps = 47/219 (21%)
Query: 39 FDARTNWPRCKDAINNVFAQADCDSCWAVSVASAYTDRYCIQRALKNLNTSSTDPHFRFS 98
FD R +P C I V Q C SCWA S + + DR C+ K ++S
Sbjct: 79 FDFREEYPHC---IPEVVDQGGCGSCWAFSSVATFGDRRCVAGLDKK--------PVKYS 127
Query: 99 ALDIMSCTYPLQDGCKAGGFPVDAWKFIQKKGVVTGTDYYQNNGCRPYPY-EPNKKASFK 157
++SC + D GG+ + WKF+ K G T + C PY + +
Sbjct: 128 PQYVVSCDH--GDMACNGGWLPNVWKFLTKTGTTT-------DECVPYKSGSTTLRGTCP 178
Query: 158 TRCSEGLLKKPKCTNSKWPTPYEKDKHYASSHTRWSGPKVKISDIQAEIKRNGPINANFF 217
T+C++G K + ++ T + + I + + +GP+ F
Sbjct: 179 TKCADG-----------------SSKVHLATATSYKDYGLDIPAMMKALSTSGPLQVAFL 221
Query: 218 LSSDLL--QRGRTDEPYIGNIKCTLFKPSNHVLEIVGWG 254
+ SD + + G Y + H +E+VG+G
Sbjct: 222 VHSDFMYYESGVYQHTY-------GYMEGGHAVEMVGYG 253
>M.Javanica_Scaff26753g092798 on XP_650937 CP5 (Cysteine protease) [Entamoeba histolytica]
Length = 318
Score = 48.1 bits (113), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/289 (20%), Positives = 108/289 (37%), Gaps = 61/289 (21%)
Query: 17 FVDLSEAAAKPPPPPPCKFVTD-------FDARTNWP-----RCKDAINNVFAQADCDSC 64
F ++EA P FV D +D+R + P R K + + QA C SC
Sbjct: 63 FAAMTEAEYNSMLKP---FVIDKQHEEIVYDSRGDVPESVDWRAKGKVPAIRDQASCGSC 119
Query: 65 WAVSVASAYTDRYCIQRALKNLNTSSTDPHFRFSALDIMSCTYPLQD-GCKAGGFPVDAW 123
++ + +A R + + K T S ++ C+ + + GC G + ++
Sbjct: 120 YSFASVAAIEGRLLVAGSKK-----FTVDDLDLSEQQLVDCSVSVGNKGCNGGSLLL-SF 173
Query: 124 KFIQKKGVVTGTDYYQNNGCRPYPYEPNKKASFKTRCSEGLLKKPKCTNSKWPTPYEKDK 183
++++ G++ DY Y+ K A K T K P +
Sbjct: 174 RYVKLNGIMQEKDYPYVAAEETCTYDKKKVA-------------VKITGQKLVRPGSEKA 220
Query: 184 HYASSHTRWSGPKVKISDIQAEIKRNGPINANFFLSSDLLQRGRTDEPYIGNIKCTLFKP 243
++ + S ++ ++ ++G N+ S+ L
Sbjct: 221 LMRAAAEGPVAAAIDASGVKFQLYKSGIYNSKECSSTQL--------------------- 259
Query: 244 SNHVLEIVGWGRKICGKNVVPYWICKNSFGASWGNGGFFNVRMGYNDNC 292
NH + +VG+G + N YWI +NS+G WG+ G+ + N+ C
Sbjct: 260 -NHGVAVVGYGTQ----NGTEYWIVRNSWGTIWGDQGYVLMSRNKNNQC 303
>M.Javanica_Scaff26753g092798 on ABC02174 Falstatin (Others) [Plasmodium falciparum]
Length = 492
Score = 46.2 bits (108), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 95/256 (37%), Gaps = 61/256 (23%)
Query: 47 RCKDAINNVFAQADCDSCWAVSVASAYTDRYCIQRALKNLNTSSTDPHFRFSALDIMSCT 106
R + V QA C SCWA S + +Y I++ F FS +++ C+
Sbjct: 276 RLHGGVTPVKDQALCGSCWAFSSVGSVESQYAIRKK----------ALFLFSEQELVDCS 325
Query: 107 YPLQDGCKAGGFPVDAWKFIQKKGVVTGTDYYQNNGCRPYPYEPNKKASFKTRCSEGLLK 166
+GC GG+ +A+ + G + D YPY N
Sbjct: 326 VK-NNGC-YGGYITNAFDDMIDLGGLCSQD--------DYPYVSNL-------------- 361
Query: 167 KPKCTNSKWPTPYEKDKHYASSHTRWSGPKVKISDIQAEIKRNGPINANFFLSSDL-LQR 225
P+ N K K Y S + + ++ GPI+ + S D R
Sbjct: 362 -PETCNLKRCNERYTIKSYVS---------IPDDKFKEALRYLGPISISIAASDDFAFYR 411
Query: 226 GRTDEPYIGNIKCTLFKPSNHVLEIVGWGRK-ICGKNV-----VPYWICKNSFGASWGNG 279
G + G NH + +VG+G K I ++ Y+I KNS+G+ WG G
Sbjct: 412 GGFYDGECG-------AAPNHAVILVGYGMKDIYNEDTGRMEKFYYYIIKNSWGSDWGEG 464
Query: 280 GFFNVRM---GYNDNC 292
G+ N+ GY C
Sbjct: 465 GYINLETDENGYKKTC 480
>M.Javanica_Scaff26753g092798 on XP_001347836 Falcipain 2 (Cysteine protease) [Plasmodium
falciparum]
Length = 492
Score = 46.2 bits (108), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 95/256 (37%), Gaps = 61/256 (23%)
Query: 47 RCKDAINNVFAQADCDSCWAVSVASAYTDRYCIQRALKNLNTSSTDPHFRFSALDIMSCT 106
R + V QA C SCWA S + +Y I++ F FS +++ C+
Sbjct: 276 RLHGGVTPVKDQALCGSCWAFSSVGSVESQYAIRKK----------ALFLFSEQELVDCS 325
Query: 107 YPLQDGCKAGGFPVDAWKFIQKKGVVTGTDYYQNNGCRPYPYEPNKKASFKTRCSEGLLK 166
+GC GG+ +A+ + G + D YPY N
Sbjct: 326 VK-NNGC-YGGYITNAFDDMIDLGGLCSQD--------DYPYVSNL-------------- 361
Query: 167 KPKCTNSKWPTPYEKDKHYASSHTRWSGPKVKISDIQAEIKRNGPINANFFLSSDL-LQR 225
P+ N K K Y S + + ++ GPI+ + S D R
Sbjct: 362 -PETCNLKRCNERYTIKSYVS---------IPDDKFKEALRYLGPISISIAASDDFAFYR 411
Query: 226 GRTDEPYIGNIKCTLFKPSNHVLEIVGWGRK-ICGKNV-----VPYWICKNSFGASWGNG 279
G + G NH + +VG+G K I ++ Y+I KNS+G+ WG G
Sbjct: 412 GGFYDGECG-------AAPNHAVILVGYGMKDIYNEDTGRMEKFYYYIIKNSWGSDWGEG 464
Query: 280 GFFNVRM---GYNDNC 292
G+ N+ GY C
Sbjct: 465 GYINLETDENGYKKTC 480
>M.Javanica_Scaff26753g092798 on XP_001347833 Falcipain 3 (Cysteine protease) [Plasmodium
falciparum]
Length = 482
Score = 40.4 bits (93), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 99/258 (38%), Gaps = 64/258 (24%)
Query: 38 DFD-ARTNWPRCKDAINNVFAQADCDSCWAVSVASAYTDRYCIQRALKNLNTSSTDPHFR 96
+FD A +W R + V Q +C SCWA S + +Y I++ +
Sbjct: 257 NFDHAAYDW-RLHSGVTPVKDQKNCGSCWAFSSIGSVESQYAIRK----------NKLIT 305
Query: 97 FSALDIMSCTYPLQDGCKAGGFPVDAWKFIQKKGVVTGTDYYQNNGCRPYPYE-PNKKAS 155
S +++ C++ GC G I+ G+ T DY PY + PN
Sbjct: 306 LSEQELVDCSFK-NYGCNGGLINNAFEDMIELGGICTDDDY-------PYVSDAPN---- 353
Query: 156 FKTRCSEGLLKKPKCTNSKWPTPYEKDKHYASSHTRWSGPKVKISDIQAEIKRNGPINAN 215
L +CT K+ K+Y S V + ++ ++ GPI+ +
Sbjct: 354 --------LCNIDRCT-EKYGI-----KNYLS---------VPDNKLKEALRFLGPISIS 390
Query: 216 FFLSSDL--LQRGRTDEPYIGNIKCTLFKPSNHVLEIVGWGRKICGKNVVP------YWI 267
+S D + G D G L NH + +VG+G K + Y+I
Sbjct: 391 IAVSDDFPFYKEGIFD----GECGDEL----NHAVMLVGFGMKEIVNPLTKKGEKHYYYI 442
Query: 268 CKNSFGASWGNGGFFNVR 285
KNS+G WG GF N+
Sbjct: 443 IKNSWGQQWGERGFINIE 460
>M.Javanica_Scaff26753g092798 on AAX77225 Falcipain 2' (Cysteine protease) [Plasmodium
falciparum]
Length = 484
Score = 40.0 bits (92), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 104/259 (40%), Gaps = 66/259 (25%)
Query: 38 DFD-ARTNWPRCKDAINNVFAQADCDSCWAVSVASAYTDRYCIQRALKNLNTSSTDPHFR 96
+FD A +W R + V Q +C SCWA S + +Y I++ +
Sbjct: 259 NFDHAAYDW-RLHSGVTPVKDQKNCGSCWAFSSIGSVESQYAIRK----------NKLIT 307
Query: 97 FSALDIMSCTYPLQDGCKAGGFPVDAWK-FIQKKGVVTGTDYYQNNGCRPYPYE-PNKKA 154
S +++ C++ GC GG +A++ I+ G+ T DY PY + PN
Sbjct: 308 LSEQELVDCSFK-NYGCN-GGLINNAFEDMIELGGICTDDDY-------PYVSDAPN--- 355
Query: 155 SFKTRCSEGLLKKPKCTNSKWPTPYEKDKHYASSHTRWSGPKVKISDIQAEIKRNGPINA 214
L +CT K+ K+Y S V + ++ ++ GPI+
Sbjct: 356 ---------LCNIDRCT-EKYGI-----KNYLS---------VPDNKLKEALRFLGPISI 391
Query: 215 NFFLSSDL--LQRGRTDEPYIGNIKCTLFKPSNHVLEIVGWGRKICGKNVVP------YW 266
+ +S D + G D G L NH + +VG+G K + Y+
Sbjct: 392 SVAVSDDFAFYKEGIFD----GECGDQL----NHAVMLVGFGMKEIVNPLTKKGEKHYYY 443
Query: 267 ICKNSFGASWGNGGFFNVR 285
I KNS+G WG GF N+
Sbjct: 444 IIKNSWGQQWGERGFINIE 462
>M.Javanica_Scaff26753g092798 on CAA38278 Cruzipain (Cysteine protease) [Trypanosoma cruzi]
Length = 70
Score = 36.6 bits (83), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 263 VPYWICKNSFGASWGNGGFFNVRMGYNDNCL 293
VPYWI KNS+ A WG G+ + G N CL
Sbjct: 3 VPYWIIKNSWTAQWGEDGYIRIAKGSN-QCL 32
>M.Javanica_Scaff26753g092798 on EAN83733 Cruzipain (Cysteine protease) [Trypanosoma cruzi]
Length = 70
Score = 34.7 bits (78), Expect = 5e-04, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 263 VPYWICKNSFGASWGNGGFFNVRMGYNDNCLENDGIN 299
VP+WI KNS+ WG G+ + G N CL + ++
Sbjct: 11 VPHWIIKNSWTTQWGEDGYIRIAKGSN-QCLVKEAVS 46
>M.Javanica_Scaff26753g092798 on CAC67416 Brucipain (Cysteine proteases) [Trypanosoma brucei]
Length = 450
Score = 37.4 bits (85), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 92/259 (35%), Gaps = 51/259 (19%)
Query: 41 ARTNWPRCKDAINNVFAQADCDSCWAVSVASAYTDRYCIQRALKNLNTSSTDPHFRFSAL 100
A +W R K A+ V Q C SCWA S ++ + + +P S
Sbjct: 128 AAVDW-REKGAVTPVKDQGQCGSCWAFSTIGNIEGQWQV----------AGNPLVSLSEQ 176
Query: 101 DIMSCTYPLQDGCKAGGFPVDAWKFIQKKGVVTGTDYYQNNGCRPYPYEPNKKASFKTRC 160
++SC + GC GG +A+ +I G + + YPY
Sbjct: 177 MLVSCD-TIDFGC-GGGLMDNAFNWIVNS---NGGNVFTE---ASYPY------------ 216
Query: 161 SEGLLKKPKCTNSKWPTPYEKDKHYASSHTRWSGPKVKISDIQAEIKRNGPINANFFLSS 220
G ++P+C + H I A + NGP+ +S
Sbjct: 217 VSGNGEQPQCQMNGHEIGAAITDHVDLPQDE--------DAIAAYLAENGPLAIAVDATS 268
Query: 221 DLLQRGRTDEPYIGNIKCTLFKPSNHVLEIVGWGRKICGKNVVPYWICKNSFGASWGNGG 280
+ G G + + +H + +VG+ + PYWI KNS+ WG G
Sbjct: 269 FMDYNG-------GILTSCTSEQLDHGVLLVGYNDS----SNPPYWIIKNSWSNMWGEDG 317
Query: 281 FFNVRMGYNDNCLENDGIN 299
+ + G N CL N ++
Sbjct: 318 YIRIEKGTN-QCLMNQAVS 335
>M.Javanica_Scaff26753g092798 on AAS38514 CP65 (Cysteine protease) [Trichomonas vaginalis]
Length = 206
Score = 33.5 bits (75), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 47 RCKDAINNVFAQADCDSCWAVSVASAYTDRYCIQRALKNLNTSSTDPHFRFSALDIMSCT 106
R K +N + Q C SCWA S A +Y I ++ + S +++ C
Sbjct: 28 RSKGVVNPIQDQGQCGSCWAFSAIQAQESQYAI----------TSGELQKLSEQNLVDCV 77
Query: 107 YPLQDGCKAGGFPVDAWKFIQK 128
DGC+ GG +A+ ++ K
Sbjct: 78 TTC-DGCE-GGLMTNAYDYVIK 97
>M.Javanica_Scaff26753g092798 on PF14_0553 Falcipain1 (Cysteine protease) [Plasmodium falciparum]
Length = 569
Score = 33.9 bits (76), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 261 NVVPYWICKNSFGASWGNGGFFNVRMGYNDN 291
N++ YWI KNS+ WG GF +R+ N N
Sbjct: 524 NIIYYWIIKNSWSKKWGENGF--MRLSRNKN 552
>M.Javanica_Scaff26753g092798 on XP_650642 CP2 (Cysteine protease) [Entamoeba histolytica]
Length = 315
Score = 30.8 bits (68), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Query: 245 NHVLEIVGWGRKICGKNVVPYWICKNSFGASWGNGGFFNV 284
NH + VG+G + GK WI +NS+G WG+ G+ N+
Sbjct: 258 NHEVCAVGYGV-VDGKEC---WIVRNSWGTGWGDKGYINM 293
>M.Javanica_Scaff26753g092798 on XP_650156 CP1 (Cysteine protease) [Entamoeba histolytica]
Length = 315
Score = 30.0 bits (66), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Query: 245 NHVLEIVGWGRKICGKNVVPYWICKNSFGASWGNGGFFNV 284
NH + VG+G + GK WI +NS+G WG G+ N+
Sbjct: 258 NHEVCAVGYG-VVDGKEC---WIVRNSWGTGWGEKGYINM 293
>M.Javanica_Scaff26753g092798 on AAV98582 CP4 (Cysteine protease) [Trichomonas vaginalis]
Length = 255
Score = 30.0 bits (66), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 16/101 (15%)
Query: 40 DARTNWPRCKDAINNVFAQADCDSCWAVSVASAYTDRYCIQRALKNLNTSSTDPHFRFSA 99
+A +W R K A+N + Q C SCWA S A +Y I + K L + S +
Sbjct: 89 NADCDW-RKKGAVNPIKDQGQCGSCWAFSAIQAQESQYYI--SFKTLQSLSEQ-----NL 140
Query: 100 LDIMSCTYPLQDGCKAGGFPVDAWKFI---QKKGVVTGTDY 137
+D ++ Y GC GG A+ ++ Q +T DY
Sbjct: 141 VDCVTTCY----GCN-GGLMDAAYDYVVKHQSGKFMTEADY 176
>M.Javanica_Scaff26753g092798 on CAA54438 CP1 (Cysteine protease) [Trichomonas vaginalis]
Length = 255
Score = 29.6 bits (65), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 40 DARTNWPRCKDAINNVFAQADCDSCWAVSVASAYTDRYCIQ-RALKNLN 87
+A +W R K A+N + Q C SCWA S A +Y I + L++L+
Sbjct: 76 NADCDW-RKKGAVNPIKDQGQCGSCWAFSAIQAQESQYYISFKTLQSLS 123
>M.Javanica_Scaff26753g092798 on CAA54436 CP2 (Cysteine protease) [Trichomonas vaginalis]
Length = 255
Score = 29.6 bits (65), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 12/82 (14%)
Query: 47 RCKDAINNVFAQADCDSCWAVSVASAYTDRYCIQRALKNLNTSSTDPHFRFSALDIMSCT 106
R K +N + Q C SCWA S A RY +A K L + +I+ C
Sbjct: 106 RDKGIVNKIKDQGQCGSCWAFSAIQASESRYA--QANKQL--------LDLAEQNIVDCV 155
Query: 107 YPLQDGCKAGGFPVDAWKFIQK 128
GC GG+P A ++ K
Sbjct: 156 TSCY-GCN-GGWPSKAIDYVVK 175
>M.Javanica_Scaff26753g092798 on AAA30134 SPAG-1 (Adhesion) [Theileria annulata]
Length = 907
Score = 30.0 bits (66), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Query: 1 MNTFSFILFLPTIFLAFVDLSEAAAKPPPPPPCKFVTDFDARTNWPRCKDAINNVFAQAD 60
MN F+L +P IF++ D A P VT ++ P KD + A +
Sbjct: 1 MNIIHFLLTIPAIFVSGADKMPAGESSRTSKPSPLVT-LESAVTQP-SKDPFKTISALSK 58
Query: 61 CDSCW--AVSVA 70
W AVSV+
Sbjct: 59 ATKVWKSAVSVS 70
>M.Javanica_Scaff26753g092798 on CAJ20707 Toxopain-2 (Protease) [Toxoplasma gondii]
Length = 255
Score = 28.9 bits (63), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 37 TDFDARTNWPRCKDAINNVFAQADCDSCWAVSVASAYTDRYCIQ 80
++ A +W R + + V Q DC SCWA S A +C +
Sbjct: 203 SELPAGVDW-RSRGCVTPVKDQRDCGSCWAFSTTGALEGAHCAK 245
>M.Javanica_Scaff26753g092798 on CAA54437 CP3 (Cysteine protease) [Trichomonas vaginalis]
Length = 255
Score = 28.1 bits (61), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
Query: 18 VDLSEAAAKPPPPPPCKFVTDFDARTNWPRCKDAINNVFAQADCDSCWAVSVASAYTDRY 77
V L K F D +W K +N + QA C SCWA SV ++
Sbjct: 79 VLLGHKQTKKIEGEAKIFKGDVPDAVDWRNAK-IVNPIKDQAQCGSCWAFSVVQVQESQW 137
Query: 78 CIQRA 82
+++
Sbjct: 138 ALKKG 142
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6251g043116
(65 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5196g038313
(92 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_817877 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.6
XP_001351319 PfEMP1 (Establishment) [Plasmodium falciparum] 23 2.9
>M.Javanica_Scaff5196g038313 on XP_817877 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 900
Score = 23.5 bits (49), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 17 PLLEQHSTVVGPTPPIVGT 35
PL ++VV PTPP+V T
Sbjct: 740 PLTVSSASVVTPTPPVVAT 758
>M.Javanica_Scaff5196g038313 on XP_001351319 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2646
Score = 23.5 bits (49), Expect = 2.9, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 4 EVITHSPLSDQPSPLLEQHSTVVGPTPP 31
E H+PL D LLE+ VG P
Sbjct: 2060 ECQEHTPLPDDEDLLLEETENPVGKQQP 2087
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7477g048245
(119 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609034 variant erythrocyte surface antigen-1, alpha subun... 30 0.036
XP_821084 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.050
XP_829761 VSG (Establishment) [Trypanosoma brucei] 29 0.057
XP_812697 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.37
XP_821088 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.49
XP_001609533 variant erythrocyte surface antigen-1, alpha subun... 26 0.62
XP_821712 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.1
XP_821898 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.4
AAA29462 ABRA (Others) [Plasmodium falciparum] 25 1.5
XP_001610197 variant erythrocyte surface antigen-1, beta subuni... 25 1.9
XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum] 25 2.1
XP_816459 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.7
XP_821683 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.0
XP_001349031 PfEMP1 (Establishment) [Plasmodium falciparum] 24 3.1
XP_820143 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.4
XP_807444 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.4
XP_809010 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.7
XP_804421 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.8
XP_811362 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 9.2
>M.Javanica_Scaff7477g048245 on XP_001609034 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1313
Score = 29.6 bits (65), Expect = 0.036, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 32 LIRVEETSKDLNKILNEGAESSAAPQIQKYKETLKPKPRIVKQDKSK 78
L +V E K+L K++ E A+ + + K K L+ +VK D +K
Sbjct: 721 LDKVNEKVKELEKVVTEKADGETSQALSKAKTALERAKEMVKNDGNK 767
>M.Javanica_Scaff7477g048245 on XP_821084 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 965
Score = 29.3 bits (64), Expect = 0.050, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 18 SLINSVKNNKNQNELIRVEETSKDLN-KILNEGAESSAAPQIQKYKETL 65
SL+ +N NQ ELI + E K +N K+ N+ Q+Q+ KE L
Sbjct: 440 SLLYKGGDNNNQEELIALYEKKKKVNHKLSNDMVTVRLTAQLQRVKEVL 488
>M.Javanica_Scaff7477g048245 on XP_829761 VSG (Establishment) [Trypanosoma brucei]
Length = 477
Score = 28.9 bits (63), Expect = 0.057, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Query: 27 KNQNELIRVEETSKDLNK----ILNE--GAESSAAPQIQKYKETLKPKPRIVKQDKSKYA 80
K Q +L ++ET+K +K I NE A++ A + KY ET K +P+ V DK K A
Sbjct: 381 KLQKQLTELQETTKKKSKTREQICNEKKDADTCKADKNCKYDETKKEEPQCVLSDKGKQA 440
>M.Javanica_Scaff7477g048245 on XP_812697 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 911
Score = 26.6 bits (57), Expect = 0.37, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 18 SLINSVKNNKNQNELIRVEETSKDLNKILNEG-AESSAAPQIQKYKETL 65
SL+ +N NQ ELI + E KD K + G A Q+Q+ KE L
Sbjct: 438 SLLYKGGDNNNQEELIALYEKMKDDEKETSPGMASVPLNKQLQRVKEVL 486
>M.Javanica_Scaff7477g048245 on XP_821088 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 910
Score = 26.2 bits (56), Expect = 0.49, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 18 SLINSVKNNKNQNELIRVEETSKDLNKILNEG-AESSAAPQIQKYKETL 65
SL+ +N NQ ELI + E KD K + G A Q+Q+ KE L
Sbjct: 437 SLLYKGGDNNNQEELIALYEKMKDDEKETSPGMASVPLNKQLQRVKEVL 485
>M.Javanica_Scaff7477g048245 on XP_001609533 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1162
Score = 26.2 bits (56), Expect = 0.62, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 58 IQKYKETLKPKPRIVKQDKSKYADDDKKLKKKGYYRDYYQKHKE 101
I K +E LK +++K+ K K DD +L G D Y KE
Sbjct: 738 INKVREVLKELEKVIKELKKKEVDDANEL--LGVVMDPYVPEKE 779
>M.Javanica_Scaff7477g048245 on XP_821712 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 905
Score = 25.4 bits (54), Expect = 1.1, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 13 NSILWSLINSVKNNKNQNELIRVEETSKDLNKILNEGAESSAAPQIQKYKETL 65
+S+L+ S + N+ ELI + E KD K N Q+++ KE L
Sbjct: 403 SSLLYKSAGSGTGDNNKEELIALYEKKKDDGKPSNSLWSVRLTAQLKRVKEVL 455
>M.Javanica_Scaff7477g048245 on XP_821898 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 846
Score = 25.0 bits (53), Expect = 1.4, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 24 KNNKNQNELIRVEETSKDLNKILNEGAESSA-APQIQKYKETLK 66
K+NK++ +LI + E K +N L+ G S+ Q+Q+ KE LK
Sbjct: 451 KDNKDE-KLIALYEKKKKVNHELSYGMVSARLTAQLQRVKEVLK 493
>M.Javanica_Scaff7477g048245 on AAA29462 ABRA (Others) [Plasmodium falciparum]
Length = 743
Score = 25.0 bits (53), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 11/73 (15%)
Query: 4 ISILVLLIFNSILWSLINSVKNNKNQNELIRVEETSKDLNKIL-----NE-----GAESS 53
I + LL+F I W++I+ KN+KNQ + V ++L K + NE G ++
Sbjct: 6 IVLFSLLLF-VIRWNIISCNKNDKNQGVDMNVLNNYENLFKFVKCEYCNEHTYVKGKKAP 64
Query: 54 AAPQIQKYKETLK 66
+ PQ KE K
Sbjct: 65 SDPQCADIKEECK 77
>M.Javanica_Scaff7477g048245 on XP_001610197 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1123
Score = 24.6 bits (52), Expect = 1.9, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 26/69 (37%)
Query: 41 DLNKILNEGAESSAAPQIQKYKETLKPKPRIVKQDKSKYADDDKKLKKKGYYRDYYQKHK 100
DL ++ G +QK P + Q K D K YY + Y+K K
Sbjct: 290 DLERLNGSGGGDKTGQFVQKLLSGTDPSGKDGIQWKEFQGDSATKGSVAEYYSEIYEKAK 349
Query: 101 EKLIETSQN 109
E T+++
Sbjct: 350 EAAKSTTES 358
>M.Javanica_Scaff7477g048245 on XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3119
Score = 24.6 bits (52), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 12/17 (70%)
Query: 90 GYYRDYYQKHKEKLIET 106
GYY+D+Y K KEK T
Sbjct: 409 GYYKDFYNKLKEKTYNT 425
>M.Javanica_Scaff7477g048245 on XP_816459 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 904
Score = 24.3 bits (51), Expect = 2.7, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 19 LINSVKNNKNQNELIRVEETSKDLNKILNEGAESSA-APQIQKYKETLKPKPRIVKQDKS 77
L S K+ KN+ ELI + E K K + G S Q+++ KE LK + K+
Sbjct: 429 LYRSGKDGKNKKELIALYEKKKGDEKETSPGMVSVILTEQLKRVKEVLKTWNEVDKRVSK 488
Query: 78 KYADDDKK 85
A ++ K
Sbjct: 489 LCASENAK 496
>M.Javanica_Scaff7477g048245 on XP_821683 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 879
Score = 23.9 bits (50), Expect = 3.0, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 21/48 (43%)
Query: 18 SLINSVKNNKNQNELIRVEETSKDLNKILNEGAESSAAPQIQKYKETL 65
SL+ NNK + ELI + E D K Q+Q+ KE L
Sbjct: 420 SLLYKSGNNKKEEELIALYEKKGDGEKPSPGMVSVRLTEQLQRVKEVL 467
>M.Javanica_Scaff7477g048245 on XP_001349031 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2275
Score = 23.9 bits (50), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 7/23 (30%), Positives = 15/23 (65%)
Query: 93 RDYYQKHKEKLIETSQNWYKMNK 115
+D+YQK +K + ++W+ N+
Sbjct: 239 KDHYQKDGDKFFQLREDWWTANR 261
>M.Javanica_Scaff7477g048245 on XP_820143 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 869
Score = 23.9 bits (50), Expect = 3.4, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 33 IRVEETSKDLNKILNEGAESSAAPQIQKYKET 64
+ V E KD K+L EGA A ++ + T
Sbjct: 134 VEVLEKPKDWTKVLEEGASDDAKTKVDVSRPT 165
Score = 22.7 bits (47), Expect = 8.0, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 19 LINSVKNNKNQNELIRVEETSKDL 42
L NS K + N ELI + E KD+
Sbjct: 418 LYNSGKTDDNDEELIALYEKKKDV 441
>M.Javanica_Scaff7477g048245 on XP_807444 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 777
Score = 23.1 bits (48), Expect = 5.4, Method: Composition-based stats.
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 19 LINSVKNNKNQNELIRVEETSKD 41
L S NN N++ELI + E KD
Sbjct: 448 LYKSGTNNNNKDELIALYEKKKD 470
>M.Javanica_Scaff7477g048245 on XP_809010 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 774
Score = 23.1 bits (48), Expect = 5.7, Method: Composition-based stats.
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 19 LINSVKNNKNQNELIRVEETSKD 41
L S NN N++ELI + E KD
Sbjct: 446 LYKSGTNNNNKDELIALYEKKKD 468
>M.Javanica_Scaff7477g048245 on XP_804421 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 864
Score = 23.1 bits (48), Expect = 5.8, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 24 KNNKNQNELIRVEETSKDLNKILNEGAESS-AAPQIQKYKETL 65
K+ N N+LI + E KD K + G S Q+++ KE L
Sbjct: 497 KSGNNNNKLIALYEKKKDGEKETSPGMVSVLLTAQLKRVKEVL 539
>M.Javanica_Scaff7477g048245 on XP_811362 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 524
Score = 22.7 bits (47), Expect = 9.2, Method: Composition-based stats.
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 19 LINSVKNNKNQNELIRVEETSKD 41
L S NN N++ELI + E KD
Sbjct: 446 LYKSGTNNNNKDELIALYEKKKD 468
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6344g043519
(92 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_820143 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.6
XP_815807 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.5
XP_001611206 variant erythrocyte surface antigen-1, alpha subun... 23 4.4
XP_805179 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.6
XP_820145 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 6.6
>M.Javanica_Scaff6344g043519 on XP_820143 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 869
Score = 24.3 bits (51), Expect = 1.6, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 17 GMGTICLVLETRKSKINCNPDGNCSGDGEPGPRTRCG 53
G G+ ++ + S + N DG DGEP TR G
Sbjct: 773 GEGSATQLVSEKSSDGHKNVDGGFFSDGEPTVETREG 809
>M.Javanica_Scaff6344g043519 on XP_815807 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 899
Score = 23.1 bits (48), Expect = 3.5, Method: Composition-based stats.
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 37 DGNCSGDGEPGPRTRCG 53
DG+ + DGEP TR G
Sbjct: 822 DGSSTADGEPTMETREG 838
>M.Javanica_Scaff6344g043519 on XP_001611206 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1285
Score = 22.7 bits (47), Expect = 4.4, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 7/42 (16%)
Query: 25 LETRKSKINCNPD-------GNCSGDGEPGPRTRCGNCFSCT 59
+E K C+P+ G +GD + P C + SCT
Sbjct: 1094 IECNACKGQCDPNKCRKGEHGRTTGDTKGTPLCNCSSIVSCT 1135
>M.Javanica_Scaff6344g043519 on XP_805179 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 793
Score = 22.7 bits (47), Expect = 5.6, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 26 ETRKSKINCNPDGNCSGDGEPGP 48
E KSK+ GNCS + E P
Sbjct: 145 ELDKSKLKTQVLGNCSSENEECP 167
>M.Javanica_Scaff6344g043519 on XP_820145 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 871
Score = 22.3 bits (46), Expect = 6.6, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 10/19 (52%)
Query: 35 NPDGNCSGDGEPGPRTRCG 53
N DG DGEP TR G
Sbjct: 795 NVDGGSFSDGEPTVETREG 813
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff29246g096113
(74 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_844695 VSG (Establishment) [Trypanosoma brucei] 22 7.8
>M.Javanica_Scaff29246g096113 on XP_844695 VSG (Establishment) [Trypanosoma brucei]
Length = 476
Score = 21.6 bits (44), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 19/45 (42%)
Query: 12 SGTTMSASTSHNNNMYGPSAKALRKAAHELQEMATRWASNPSISQ 56
SG+++ N GP+ K LR A + R PS +Q
Sbjct: 360 SGSSIGEDKPVALNKVGPTIKVLRAAGYYSAAKLIREKKQPSKTQ 404
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff548g007483
(368 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351517 PfEMP1 (Establishment) [Plasmodium falciparum] 27 3.0
CAB92983 SBP1 (Others) [Plasmodium falciparum] 25 7.0
XP_815706 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 9.4
XP_815707 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 9.4
>M.Javanica_Scaff548g007483 on XP_001351517 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2193
Score = 26.6 bits (57), Expect = 3.0, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 11/77 (14%)
Query: 283 PGLNTLASNIQQQQPPSRRPRLSEQIRGQIQPQQFLPQEFLRQQ-YRPGQYRPQPPQQSS 341
PGL++ +++QPP + ++Q +P +FLRQ Y G YR S+
Sbjct: 1044 PGLSSSVLGEEEEQPP----------QSKLQQTGEIPPDFLRQMFYTLGDYRDILVGNST 1093
Query: 342 HGSNSIPRNATSENSSD 358
H ++ + +E +
Sbjct: 1094 HILEAVTIGSNNETGKE 1110
>M.Javanica_Scaff548g007483 on CAB92983 SBP1 (Others) [Plasmodium falciparum]
Length = 391
Score = 25.0 bits (53), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 231 INSNPTIPLTSAFNTANINPRPQLPFNQPSPY-----LIHNPDLAENKRHFLTNLLGPGL 285
IN+N IP+++ F+ N + + N S Y LIH+ D + + N L
Sbjct: 121 INNNHQIPVSNIFSENIDNNKNYIESNYKSTYNNNPELIHSTDFIGSNNNHTFNFLSRYN 180
Query: 286 NTLASNIQ-QQQPPSRRPRLSEQI 308
N++ +N+Q + P P L +I
Sbjct: 181 NSVLNNMQGNTKVPGNVPELKARI 204
>M.Javanica_Scaff548g007483 on XP_815706 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 907
Score = 25.0 bits (53), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 313 QPQQFLPQEFLRQQYRPGQYRPQPPQQSSHGSNSIPRNATSEN--SSDNGNENNDN 366
+P++ P E ++ P + RP+ P+ + G+ P + TS + S+D G ++D+
Sbjct: 759 RPEEPEPAESRPEEPEPAESRPEEPEPAREGTADQPASVTSSDAASTDVGASSSDD 814
>M.Javanica_Scaff548g007483 on XP_815707 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 907
Score = 25.0 bits (53), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 313 QPQQFLPQEFLRQQYRPGQYRPQPPQQSSHGSNSIPRNATSEN--SSDNGNENNDN 366
+P++ P E ++ P + RP+ P+ + G+ P + TS + S+D G ++D+
Sbjct: 759 RPEEPEPAESRPEEPEPAESRPEEPEPAREGTADQPASVTSSDAASTDVGASSSDD 814
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7231g047264
(122 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4049g032601
(56 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_808394 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 0.79
XP_810614 Trans-sialidase (Invasion) [Trypanosoma cruzi] 21 5.6
>M.Javanica_Scaff4049g032601 on XP_808394 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 912
Score = 23.5 bits (49), Expect = 0.79, Method: Composition-based stats.
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 8 IIITFIIMVCLARSPSATVTFITT 31
+++ +IM+C A P+ +F TT
Sbjct: 48 VLLLLVIMMCAAAGPAQAQSFGTT 71
>M.Javanica_Scaff4049g032601 on XP_810614 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 728
Score = 21.2 bits (43), Expect = 5.6, Method: Composition-based stats.
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 8 IIITFIIMVCLARSPSATVTFITTRVEL 35
+++ F++M+C + S VT + V+L
Sbjct: 40 VLLLFVVMMCSSGGASNAVTSNSGNVQL 67
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4271g033722
(154 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351321 PfEMP1 (Establishment) [Plasmodium falciparum] 25 1.9
>M.Javanica_Scaff4271g033722 on XP_001351321 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3467
Score = 25.4 bits (54), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 80 ILVGNDSKYFVDQPTKLEASVVQQKFDELFPKSV 113
I++GN D+ K + +++ D++FP SV
Sbjct: 2313 IVIGNTGSGASDKEMKAKEEKIKETIDKVFPNSV 2346
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4497g034905
(83 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351877 PfEMP1 (Establishment) [Plasmodium falciparum] 23 2.2
XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum] 23 4.0
XP_816303 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.3
XP_001609041 variant erythrocyte surface antigen-1, alpha subun... 22 7.2
>M.Javanica_Scaff4497g034905 on XP_001351877 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2270
Score = 23.5 bits (49), Expect = 2.2, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
Query: 20 NMYQAD-----PKKPIGGNILAHASTTRLFFRKGRGPQRICKIYDSPCLPESECTFEITG 74
NM Q++ P G+I + L+F K I I+D L E +++++
Sbjct: 1961 NMLQSEQPNDVPNDYSSGDIPFNTQPNTLYFDKPEEKPFITSIHDRNLLSGEEYSYDMST 2020
Query: 75 HGIDD 79
+ +DD
Sbjct: 2021 NTMDD 2025
>M.Javanica_Scaff4497g034905 on XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2858
Score = 22.7 bits (47), Expect = 4.0, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 2/56 (3%)
Query: 26 PKKPIGGNILAHASTTRLFFRKGRGPQRICKIYDSPCLPESECTFEI--TGHGIDD 79
PK I GN + L+F K I I+D E + I + + +DD
Sbjct: 2602 PKNNISGNTPMNTQPNTLYFNKPEEKPFITSIHDRDLYSGEEINYNINMSTNSMDD 2657
>M.Javanica_Scaff4497g034905 on XP_816303 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 955
Score = 22.3 bits (46), Expect = 5.3, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 3 GVAVVVTNQVVSQVDGGNMYQADPKK 28
GV+ NQ V DGG + +P K
Sbjct: 830 GVSSSDGNQTVDTADGGKTQEDEPHK 855
>M.Javanica_Scaff4497g034905 on XP_001609041 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1318
Score = 21.9 bits (45), Expect = 7.2, Method: Composition-based stats.
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 14 SQVDGGNMYQADPK 27
S VDGG +Y+ PK
Sbjct: 250 SWVDGGGLYEHKPK 263
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff497g006926
(57 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum] 22 3.0
>M.Javanica_Scaff497g006926 on XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3954
Score = 21.9 bits (45), Expect = 3.0, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 17 QNNLCESEKNVGTSVHLKSEKEREISFKNLIISDN 51
+NNL + NV + + S+ S KN ISDN
Sbjct: 3671 KNNLYSGQNNVYSGIDPTSDNRGPYSDKNDRISDN 3705
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff29269g096143
(86 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351876 PfEMP1 (Establishment) [Plasmodium falciparum] 25 1.0
XP_001350798 PfEMP1 (Establishment) [Plasmodium falciparum] 23 3.7
XP_001350082 Rh2b (Adhesin) [Plasmodium falciparum] 22 5.3
>M.Javanica_Scaff29269g096143 on XP_001351876 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3164
Score = 24.6 bits (52), Expect = 1.0, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 33 RSSESNSNSQAHRECNIGPICDCYATTTPSN 63
+ ++ + Q + CN G CDC + SN
Sbjct: 1902 KDAQEYLDKQLQKSCNSGGKCDCMNKKSMSN 1932
>M.Javanica_Scaff29269g096143 on XP_001350798 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2359
Score = 22.7 bits (47), Expect = 3.7, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Query: 25 CPAPLTNTRSSESNSNSQAHRECNIGPICDCYATTTPSNIP--TSTTA 70
C A T ++N S H + P + A T+P P TST A
Sbjct: 1850 CKAASPATSEEQTNQTSNPHETPVLKPEEEATAPTSPPRPPLVTSTLA 1897
>M.Javanica_Scaff29269g096143 on XP_001350082 Rh2b (Adhesin) [Plasmodium falciparum]
Length = 1115
Score = 22.3 bits (46), Expect = 5.3, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 31 NTRSSESNSNSQAHRECNIGPICDCYATTTPSN 63
+T ++ + + S H E +I PI + Y N
Sbjct: 789 STINTSTRNTSSTHDESHISPISNAYDHVVSDN 821
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3941g032032
(95 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_821683 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.5
XP_821395 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 6.1
XP_810932 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 6.7
AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum] 22 7.2
AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum] 22 7.3
>M.Javanica_Scaff3941g032032 on XP_821683 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 879
Score = 22.7 bits (47), Expect = 5.5, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 18 SLINSVKNNKTQNELIGVEETSKDLDK 44
SL+ NNK + ELI + E D +K
Sbjct: 420 SLLYKSGNNKKEEELIALYEKKGDGEK 446
>M.Javanica_Scaff3941g032032 on XP_821395 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 768
Score = 22.3 bits (46), Expect = 6.1, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 11 IFNSILWSLINSVKNNKTQNELIGVEETSKDLDK 44
I + ++ L S +NK ++E +GV+ T K+ D+
Sbjct: 498 ITDGLVGFLSGSFSDNKWRDEYLGVDATVKNNDE 531
>M.Javanica_Scaff3941g032032 on XP_810932 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 753
Score = 22.3 bits (46), Expect = 6.7, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 5 SVLIFLIFNSILWSLINSVKNNKTQNELIGVEETS 39
S++I+ N WSL NSV + K N I E S
Sbjct: 294 SMIIYSKDNGSTWSLSNSVSSAKCVNPRITEWEGS 328
>M.Javanica_Scaff3941g032032 on AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2965
Score = 22.3 bits (46), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 26 NKTQNELIGVEETSKDLDKILNYGENQLSFLKSVSI 61
N+ QN++ ++E L + LNY +N++ LK I
Sbjct: 2057 NERQNDVHNIKEDYNLLQQYLNYMKNEMEQLKKYKI 2092
>M.Javanica_Scaff3941g032032 on AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2969
Score = 22.3 bits (46), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 26 NKTQNELIGVEETSKDLDKILNYGENQLSFLKSVSI 61
N+ QN++ ++E L + LNY +N++ LK I
Sbjct: 2053 NERQNDVHNIKEDYNLLQQYLNYMKNEMEQLKKYKI 2088
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff28352g094961
(275 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6967g046190
(243 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_809960 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.7
XP_001608668 variant erythrocyte surface antigen-1, alpha subun... 25 6.6
XP_815156 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.9
>M.Javanica_Scaff6967g046190 on XP_809960 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 890
Score = 25.4 bits (54), Expect = 3.7, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 180 IDADATTNGGGPPVPAAVVRLQHQQQTHMESLDSG 214
ID +AT GG +P VRL+ Q++ S DSG
Sbjct: 579 IDKEATE--GGTTIPVMGVRLEGQEKLMELSYDSG 611
>M.Javanica_Scaff6967g046190 on XP_001608668 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1337
Score = 24.6 bits (52), Expect = 6.6, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 144 NRSHHSTSASVVAMAGSSKESSSIDRH 170
+R +T A++V GSS S+ ID+H
Sbjct: 416 HRDSFNTDAAIVFPNGSSSSSNDIDQH 442
>M.Javanica_Scaff6967g046190 on XP_815156 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 966
Score = 24.6 bits (52), Expect = 6.9, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Query: 165 SSIDRHGNDLIPPELIDADATTNGGGPPVPAAVVRLQHQQQTH-MESLDSGSS 216
S RHG + PE + + T GG A H + E L SG S
Sbjct: 777 SETTRHGQQPLKPEPLKGEEGTGSGGASNSAKTTMTTHSVGSQSAEQLPSGGS 829
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff27152g093355
(56 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ABA06445 MSA-2a/b (Invasion) [Babesia bovis] 23 0.78
ABA06449 MSA-2a/b T-2 (Invasion) [Babesia bovis] 23 0.78
>M.Javanica_Scaff27152g093355 on ABA06445 MSA-2a/b (Invasion) [Babesia bovis]
Length = 274
Score = 23.5 bits (49), Expect = 0.78, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 8 KFPALPPTLV-LACWLHSFPRRLLSNVLGLLMHHY--HPSRDSCTVRQH 53
+ P + L+ +LH P+R+++N G + +Y H S++ V+ +
Sbjct: 118 RVPLIKSKLIAFNAFLHDNPQRIMANQDGEMTKYYKEHISKEDVKVKDY 166
>M.Javanica_Scaff27152g093355 on ABA06449 MSA-2a/b T-2 (Invasion) [Babesia bovis]
Length = 274
Score = 23.5 bits (49), Expect = 0.78, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 8 KFPALPPTLV-LACWLHSFPRRLLSNVLGLLMHHY--HPSRDSCTVRQH 53
+ P + L+ +LH P+R+++N G + +Y H S++ V+ +
Sbjct: 118 RVPLIKSKLIAFNAFLHDNPQRIMANQDGEMTKYYKEHISKEDVKVKDY 166
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff28140g094667
(142 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum] 25 1.4
XP_821395 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.5
ABV44288 PP2C2 (Establishment) [Toxoplasma gondii] 24 4.1
XP_001608796 variant erythrocyte surface antigen-1, alpha subun... 23 9.2
XP_001349437 PfEMP1 (Establishment) [Plasmodium falciparum] 23 9.6
XP_001611441 variant erythrocyte surface antigen-1, beta subuni... 23 9.7
>M.Javanica_Scaff28140g094667 on XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2264
Score = 25.4 bits (54), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 76 KQARNFQK--KQKFEKIKKIVENFEEKNGQILIDVNDWETTSVSSKGSSF 123
KQ R ++K KFE+ +K + +EE++G+++ N+ + ++ K +
Sbjct: 1298 KQCRKYRKWIDIKFEEFRKQEKKYEEEHGKVITSSNNADDKNIYEKLKDY 1347
>M.Javanica_Scaff28140g094667 on XP_821395 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 768
Score = 25.4 bits (54), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 24 GAPTPLAVSGEAQGSGGN--GTLIIDGSFGVEEEEGENLVQ 62
G + A +G A GSG G L++ G+ VEE GE +Q
Sbjct: 179 GKYSRTAATGGAPGSGAGDCGLLLVKGNVSVEESGGEKRIQ 219
>M.Javanica_Scaff28140g094667 on ABV44288 PP2C2 (Establishment) [Toxoplasma gondii]
Length = 255
Score = 23.9 bits (50), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 8/22 (36%), Positives = 16/22 (72%)
Query: 97 FEEKNGQILIDVNDWETTSVSS 118
F ++ + +I VN+W TT+V++
Sbjct: 159 FADRREKKVITVNEWYTTTVAA 180
>M.Javanica_Scaff28140g094667 on XP_001608796 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1261
Score = 23.1 bits (48), Expect = 9.2, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Query: 35 AQGSGGNGTLIIDGSFGVEEEEGENLVQQRNKRAH-ERTISEKQARNFQKKQKFEKIKKI 93
+ G GN ++ + G +R KR + +I +K+ Q Q + +KK+
Sbjct: 1109 SHGETGNAQYMVSATVTHSTWRG---TSRRGKRMEGDYSIEKKENGKKQCHQFLDSLKKV 1165
Query: 94 VENFEEKNGQ 103
+E+ E+ Q
Sbjct: 1166 IESTEKATSQ 1175
>M.Javanica_Scaff28140g094667 on XP_001349437 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2231
Score = 23.1 bits (48), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 82 QKKQKFEKIKKIVENFEEKNGQILIDVND 110
++KQ +K+KKI EN +++N + L + D
Sbjct: 209 KRKQLDDKLKKIFENIKKENNEKLKSLTD 237
>M.Javanica_Scaff28140g094667 on XP_001611441 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1205
Score = 23.1 bits (48), Expect = 9.7, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 73 ISEKQARNFQKKQKFEKIKKIVENF---EEKNGQILIDVND-WETTSVSSKGSS 122
I +Q+ NF K + K++ VEN K G+ L+ D + T+ S G++
Sbjct: 855 IGARQSWNFTAKSVWSKLRDEVENVGLGMVKKGETLVTALDKFSGTTAESNGTN 908
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff25889g091573
(65 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_816729 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.34
Q9XZD5 TgPrx2 (Others) [Toxoplasma gondii] 24 0.87
>M.Javanica_Scaff25889g091573 on XP_816729 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 890
Score = 25.0 bits (53), Expect = 0.34, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 2 QRILLFVALFLCIVLVFDNIKFASASPLESREYSHHAHPPAYNW 45
QR +F LF +VL+F + AS E S+ P + W
Sbjct: 35 QRPHMFRHLFYSVVLLFCVVVMCCASEDAHAEESNPVTAPTFAW 78
>M.Javanica_Scaff25889g091573 on Q9XZD5 TgPrx2 (Others) [Toxoplasma gondii]
Length = 255
Score = 23.9 bits (50), Expect = 0.87, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 13/34 (38%)
Query: 14 IVLVFDNIKFASASPLESREYSHHAHPPAYNWDL 47
I V D IKF + R H H P WD
Sbjct: 141 IFFVRDAIKFPDFIHTQKRHPQTHLHDPNMVWDF 174
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2937g026181
(383 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349437 PfEMP1 (Establishment) [Plasmodium falciparum] 25 8.0
>M.Javanica_Scaff2937g026181 on XP_001349437 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2231
Score = 25.4 bits (54), Expect = 8.0, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 212 CASSPIRVRARHWQSSNVLLQVCQRESFP--ATLGFNPLLNCQEFPSPGHVAYTELALPK 269
C + +++ + + N+LL VC + + G++ Q +PS G TELA
Sbjct: 129 CDKNIQQIKTENITTHNLLLDVCLAAKYEGESLKGYHEQYEVQ-YPSSGSTMCTELARSF 187
Query: 270 ASYVDIV 276
A DIV
Sbjct: 188 ADIGDIV 194
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff29466g096371
(96 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum] 32 0.003
XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum] 32 0.003
XP_001351079 PfEMP1 (Establishment) [Plasmodium falciparum] 32 0.004
XP_001347288 PfEMP1 (Establishment) [Plasmodium falciparum] 31 0.006
XP_001351319 PfEMP1 (Establishment) [Plasmodium falciparum] 29 0.031
XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum] 28 0.057
XP_001349219 PfEMP1 (Establishment) [Plasmodium falciparum] 28 0.093
XP_965997 PfEMP1 (Establishment) [Plasmodium falciparum] 27 0.17
XP_814620 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.26
XP_808081 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.26
XP_810676 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.32
XP_816751 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.32
XP_001350798 PfEMP1 (Establishment) [Plasmodium falciparum] 26 0.44
XP_816853 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.56
XP_811703 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.70
AAL15422 MSA-2a2 (Invasion) [Babesia bovis] 25 0.85
XP_805883 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.97
XP_804902 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.0
XP_818344 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.1
XP_812339 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.2
XP_001349030 PfEMP1 (Establishment) [Plasmodium falciparum] 25 1.3
XP_001351318 PfEMP1 (Establishment) [Plasmodium falciparum] 25 1.3
XP_001349514 PfEMP1 (Establishment) [Plasmodium falciparum] 24 1.5
XP_803151 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.1
XP_001347690 PfEMP1 (Establishment) [Plasmodium falciparum] 24 2.2
XP_820458 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.3
XP_001350935 PfEMP1 (Establishment) [Plasmodium falciparum] 23 2.8
XP_812309 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.3
XP_808217 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.5
XP_817875 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.6
ABA06473 MSA-2b (Invasion) [Babesia bovis] 23 3.8
XP_804613 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.9
XP_812607 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.1
XP_819012 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.2
XP_814246 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.4
XP_001352170 MSP1 (Invasion) [Plasmodium falciparum] 23 5.7
AAL15421 MSA-2a1 (Invasion) [Babesia bovis] 22 5.9
XP_816303 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.9
ABA06450 MSA-2a1 (Invasion) [Babesia bovis] 22 5.9
XP_812793 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 6.4
XP_807433 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 6.4
XP_821390 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 6.8
AAL15425 MSA-2a1 (Invasion) [Babesia bovis] 22 7.5
XP_804106 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 8.1
XP_813616 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 9.3
XP_807743 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 9.4
XP_818848 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 9.5
XP_807772 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 9.5
>M.Javanica_Scaff29466g096371 on XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2238
Score = 32.0 bits (71), Expect = 0.003, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 53 PSGTTTTGATPASTASTGPSTSAGTGSTSTGTGPTGAPT 91
PSG TT + +TAS +T++G +T++G T + T
Sbjct: 1857 PSGNNTTASGNNTTASGNNTTASGNNTTASGNNTTASDT 1895
Score = 25.0 bits (53), Expect = 0.95, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 24/65 (36%), Gaps = 15/65 (23%)
Query: 41 GVSSTAPTTTVGPSGTTTTGATPASTASTGPST---------------SAGTGSTSTGTG 85
G AP+ T +G+ T G+ A T S G+G+T+T +G
Sbjct: 873 GWRCVAPSDTTKTTGSETAGSRTTRAADGAEPTRDDGNGDGAGGAPAKSGGSGATTTSSG 932
Query: 86 PTGAP 90
P
Sbjct: 933 SICVP 937
Score = 24.6 bits (52), Expect = 1.2, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 41 GVSSTAPTTTVGPSGTTTTGATPASTASTGPSTSAGTGSTSTGTG-PTGAPTATPA 95
G ++TA SG TT + +TAS +T++ T + G P+ P TP+
Sbjct: 1859 GNNTTASGNNTTASGNNTTASGNNTTASGNNTTASDTQNDIQNDGIPSDTPN-TPS 1913
>M.Javanica_Scaff29466g096371 on XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3119
Score = 32.0 bits (71), Expect = 0.003, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 46 APTTTVGPSGTTTTGATPASTASTGPSTSAGTGSTSTGTGPTGAPTATP 94
A T GP T+ P ++ +G +T+AG+ T+T +GA P
Sbjct: 1886 ACTLKYGPKAPTSWKCVPTTSGGSGVTTTAGSSVTTTPPSNSGAICVPP 1934
>M.Javanica_Scaff29466g096371 on XP_001351079 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2203
Score = 32.0 bits (71), Expect = 0.004, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 53 PSGTTTTGATPASTASTGPSTSAGTGSTSTGTGPTGAPT 91
PSG TT + +TAS +T++G +T++G T + T
Sbjct: 1867 PSGKNTTASGNNTTASGNNTTASGNNTTASGKNTTASDT 1905
>M.Javanica_Scaff29466g096371 on XP_001347288 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2241
Score = 31.2 bits (69), Expect = 0.006, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 53 PSGTTTTGATPASTASTGPSTSAGTGSTSTGTGPTGAPT 91
PSG TT + +TAS +T++G +T++G T + T
Sbjct: 1900 PSGNNTTASGNNTTASGNNTTASGNNTTASGNNTTASDT 1938
>M.Javanica_Scaff29466g096371 on XP_001351319 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2646
Score = 29.3 bits (64), Expect = 0.031, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 53 PSGTTTTGATPASTASTGPSTSAGTGSTSTG 83
PSG TT + +TAS +T++G +T++G
Sbjct: 2289 PSGNNTTASGNNTTASGNNTTASGNNTTASG 2319
>M.Javanica_Scaff29466g096371 on XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2264
Score = 28.5 bits (62), Expect = 0.057, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 53 PSGTTTTGATPASTASTGPSTSAGTGSTSTGT 84
PSG TT + +TAS +T++G +T++ T
Sbjct: 1894 PSGNNTTASGNNTTASGNNTTASGNNTTASDT 1925
Score = 23.5 bits (49), Expect = 2.9, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Query: 66 TASTGPSTSAG--TGSTSTGTGPTGAPTATPAS 96
T S G + + G TGS S PT A A P+S
Sbjct: 919 TTSGGDNNTPGETTGSESERAEPTRAKRAAPSS 951
>M.Javanica_Scaff29466g096371 on XP_001349219 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2595
Score = 27.7 bits (60), Expect = 0.093, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 53 PSGTTTTGATPASTASTGPSTSAGTGSTSTGT 84
PSG TT + +TAS +T++G +T++ T
Sbjct: 2213 PSGNNTTASGNNTTASGNNTTASGNNTTASDT 2244
>M.Javanica_Scaff29466g096371 on XP_965997 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2879
Score = 26.9 bits (58), Expect = 0.17, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 43 SSTAPTTTVGPSGTTTTGATPASTASTGPSTSAG 76
S+ A + +G++ TG T A T +T ST+AG
Sbjct: 1113 SAAARNRVIRAAGSSATGGTTAMTPNTPYSTAAG 1146
>M.Javanica_Scaff29466g096371 on XP_814620 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 931
Score = 26.6 bits (57), Expect = 0.26, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Query: 26 ATTPPVCYCQCESTPGVSSTAPTTTVGPSGTT-TTGATPASTASTGPSTSAGTGSTSTGT 84
A+ PPV + + + T SS+A GP G ST+ + PST +G +
Sbjct: 731 ASIPPVVHEKAQGTQSQSSSAGQPPSGPKLLNGNEGEVGGSTSPSEPSTVTNSGKEQSEI 790
Query: 85 GPTGA 89
P A
Sbjct: 791 QPPSA 795
Score = 22.7 bits (47), Expect = 6.0, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Query: 54 SGTTTTGATPASTASTGPSTSAGTGSTSTGTGPTGAPTAT 93
+G G TP T P T+ T+T T G P AT
Sbjct: 820 AGGAVQGDTPPQTPVDTPDTADANAPTATDTAQVG-PAAT 858
>M.Javanica_Scaff29466g096371 on XP_808081 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 893
Score = 26.6 bits (57), Expect = 0.26, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Query: 35 QCESTPGVSSTAPTTTVGPSGTT--TTGATPASTASTGPSTSAGTGSTSTGTGPTGAPTA 92
+ ST G T ++G SG + A ST ST P+ ++GT P G T
Sbjct: 759 ETSSTAGTQPTEKGQSMGSSGAGNGSASAPAVSTVSTSPAEEESVVQVTSGTSPDGNQTV 818
Query: 93 TPAS 96
S
Sbjct: 819 GGGS 822
>M.Javanica_Scaff29466g096371 on XP_810676 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1040
Score = 26.2 bits (56), Expect = 0.32, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 17/69 (24%)
Query: 45 TAPTTTVGPSGTTTT------GATPASTASTGPSTSAG-----------TGSTSTGTGPT 87
TA + + GP + +T GAT A ST P T+ G G+TST G T
Sbjct: 923 TAVSASSGPDSSHSTEVAPVDGATAAHEPSTDPETAQGHDELLDGDDAAPGNTSTTPGET 982
Query: 88 GAPTATPAS 96
P+ + A+
Sbjct: 983 KIPSESNAT 991
Score = 22.3 bits (46), Expect = 8.2, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Query: 43 SSTAPTTT----VGPSGTTTTGATPASTASTGPSTSAGT 77
S +AP T+ GP G A +AS+GP +S T
Sbjct: 899 SHSAPLTSDEQNFGPEGRKDAHPHTAVSASSGPDSSHST 937
>M.Javanica_Scaff29466g096371 on XP_816751 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1042
Score = 26.2 bits (56), Expect = 0.32, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 17/69 (24%)
Query: 45 TAPTTTVGPSGTTTT------GATPASTASTGPSTSAG-----------TGSTSTGTGPT 87
TA + + GP + +T GAT A ST P T+ G G+TST G T
Sbjct: 925 TAVSASSGPDSSHSTEVAPVDGATAAHEPSTDPETAQGHDELLDGDDAAPGNTSTTPGKT 984
Query: 88 GAPTATPAS 96
P+ + A+
Sbjct: 985 KIPSESNAT 993
>M.Javanica_Scaff29466g096371 on XP_001350798 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2359
Score = 25.8 bits (55), Expect = 0.44, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Query: 51 VGPSGTT--TTGATPASTASTGPSTSAGTGSTS 81
V PS TT TTG + ++T+S+G +T+ TS
Sbjct: 1065 VAPSHTTSETTGKSESATSSSGATTAPAPSLTS 1097
>M.Javanica_Scaff29466g096371 on XP_816853 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1044
Score = 25.4 bits (54), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Query: 32 CYCQCESTPGVSSTAPTTTVGPSGTTTTGATPASTASTGPSTSAGTGSTSTGTGPTGAPT 91
Y + + + +A V P+GT TTGA + + G S ++ + P+G
Sbjct: 883 VYGEHQVQKSIELSAENNDVRPTGTGTTGAEESLSLEAGDRNSERAMNSDSSLTPSGID- 941
Query: 92 ATPAS 96
A P S
Sbjct: 942 AEPRS 946
>M.Javanica_Scaff29466g096371 on XP_811703 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1043
Score = 25.4 bits (54), Expect = 0.70, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 44 STAPTTT---VGPSGTTTTGATPASTASTGPSTSAGTGSTSTGTGPT 87
ST P+T V +GT TTGA + + G S GT S+ + P+
Sbjct: 889 STEPSTENDDVRSTGTGTTGAEESLSLEAGGRNSEGTMSSDSSLTPS 935
>M.Javanica_Scaff29466g096371 on AAL15422 MSA-2a2 (Invasion) [Babesia bovis]
Length = 292
Score = 25.0 bits (53), Expect = 0.85, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 5/58 (8%)
Query: 37 ESTPGVSSTAPTTTVGPSGTTTTGATPASTASTGPSTSAGTGSTSTGTGPTGAPTATP 94
ES+P SS + +T TPA+ + GP+ S S PT PT TP
Sbjct: 204 ESSPAPSSPQRPAETQQTQDSTAPGTPAAPSPQGPTAE----SPSQADHPT-KPTQTP 256
>M.Javanica_Scaff29466g096371 on XP_805883 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1038
Score = 25.0 bits (53), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 42 VSSTAPTTTVGPSGTTTTGATPASTASTGPSTSAGTGSTSTGTGPTG 88
+ +A V P+GT TTGA + + G S G ++ + P+G
Sbjct: 885 IDLSAENNDVRPTGTGTTGAEESLSLEAGERNSEGKMNSDSSPTPSG 931
>M.Javanica_Scaff29466g096371 on XP_804902 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1042
Score = 24.6 bits (52), Expect = 1.0, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 45 TAPTTTVGPSGTTTTGATPASTASTGPSTSAGTGSTSTGTGPTGAPTATPAS 96
+A V +GT TTGA + + G S GT S+ + P+ + A P S
Sbjct: 892 SAENNDVRSTGTGTTGAEESLSLEVGDGNSEGTMSSDSSLTPSKS-DAEPTS 942
>M.Javanica_Scaff29466g096371 on XP_818344 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 928
Score = 24.6 bits (52), Expect = 1.1, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 21/47 (44%)
Query: 43 SSTAPTTTVGPSGTTTTGATPASTASTGPSTSAGTGSTSTGTGPTGA 89
S++AP+T G + P S S+G S S+S G GA
Sbjct: 768 STSAPSTVTTSLGKEQSEIQPPSVISSGGSKHVDIASSSDGDPTVGA 814
>M.Javanica_Scaff29466g096371 on XP_812339 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 949
Score = 24.6 bits (52), Expect = 1.2, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 23/50 (46%)
Query: 47 PTTTVGPSGTTTTGATPASTASTGPSTSAGTGSTSTGTGPTGAPTATPAS 96
P T +G+ + + S+A+T P+ +++GT P G AS
Sbjct: 775 PLRTSENAGSGSLSTSAVSSATTSPAAKESEDQSASGTPPEGHSNVDGAS 824
>M.Javanica_Scaff29466g096371 on XP_001349030 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 24.6 bits (52), Expect = 1.3, Method: Composition-based stats.
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 54 SGTTTTGATPASTASTGPST 73
SGT T TP+ST+ P+T
Sbjct: 1191 SGTKPTNQTPSSTSDNTPTT 1210
>M.Javanica_Scaff29466g096371 on XP_001351318 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2169
Score = 24.6 bits (52), Expect = 1.3, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 53 PSGTTTTGATPASTASTGPSTSAGTGSTS 81
PSG TT + +TAS +T++G + S
Sbjct: 1840 PSGNNTTASGNNTTASGNNTTASGKNTPS 1868
>M.Javanica_Scaff29466g096371 on XP_001349514 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2120
Score = 24.3 bits (51), Expect = 1.5, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 20 QTTCGVATTPPVCYCQCES 38
QT CG TTP C+C +
Sbjct: 280 QTACGGGTTPTPNKCRCAT 298
>M.Javanica_Scaff29466g096371 on XP_803151 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 755
Score = 23.9 bits (50), Expect = 2.1, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 37 ESTPGVSSTAPTTTVGPSGTTTTGATPASTASTGPSTSAGTGSTSTGTGPTGAPT 91
ES+ +APT PS T++G ++T +S GT + G+ G PT
Sbjct: 638 ESSGVNGVSAPTV---PSAKTSSGEEVSATQLVSEESSDGTQTVDGGSFSDGEPT 689
>M.Javanica_Scaff29466g096371 on XP_001347690 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 23.9 bits (50), Expect = 2.2, Method: Composition-based stats.
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 35 QCESTPGVSSTAP 47
+CE+TPGV S P
Sbjct: 745 KCENTPGVRSQTP 757
>M.Javanica_Scaff29466g096371 on XP_820458 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 923
Score = 23.9 bits (50), Expect = 2.3, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 21/39 (53%)
Query: 38 STPGVSSTAPTTTVGPSGTTTTGATPASTASTGPSTSAG 76
STP S+ A ++ P T+G +P+ + ++S+G
Sbjct: 791 STPATSTAAASSGQEPVKQPTSGTSPSGNKNADGTSSSG 829
>M.Javanica_Scaff29466g096371 on XP_001350935 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2268
Score = 23.5 bits (49), Expect = 2.8, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Query: 53 PSGTTTTGATPASTASTGPSTSAGTGSTSTGTGPTGAP 90
PSG TT + +TAS +T++ S +T PT P
Sbjct: 1923 PSGNNTTASGNNTTASGNNTTASDIPSDNT---PTPQP 1957
>M.Javanica_Scaff29466g096371 on XP_812309 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 827
Score = 23.5 bits (49), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Query: 41 GVSSTAPTTTVGPSGTTTTGATPASTASTGPSTSAGTGS 79
G P ++G SG G PAST S+ ++S G GS
Sbjct: 735 GGRQEEPRQSLGSSGA---GVVPASTVSSAKTSSGGEGS 770
>M.Javanica_Scaff29466g096371 on XP_808217 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 880
Score = 23.1 bits (48), Expect = 3.5, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
Query: 26 ATTPPVCYCQCESTPGVSSTAPTTTVGP-----SGTTTTGATPASTASTGPSTSAGTGS 79
A+TPP + TP SS+A + P + +G AS ST SA GS
Sbjct: 729 ASTPPAVPDNAQGTPSQSSSAGQSPSEPKLLNENQGADSGGASASAVSTVSIPSAENGS 787
>M.Javanica_Scaff29466g096371 on XP_817875 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 935
Score = 23.1 bits (48), Expect = 3.6, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
Query: 26 ATTPPVCYCQCESTPGVSSTAPTTTVGP-----SGTTTTGATPASTASTGPSTSAGTGS 79
A+TPP + TP SS+A + P + +G AS ST SA GS
Sbjct: 782 ASTPPAVPDNAQGTPSQSSSAGQSPSEPKLLNENQGADSGGASASAVSTVSIPSAENGS 840
>M.Javanica_Scaff29466g096371 on ABA06473 MSA-2b (Invasion) [Babesia bovis]
Length = 316
Score = 23.1 bits (48), Expect = 3.8, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 28/76 (36%), Gaps = 24/76 (31%)
Query: 43 SSTAPTTTVGPSGTTTT--------------GATPASTASTGPSTSAGTGSTSTGTGPTG 88
SS AP++ P+ T T PA T T ST+ GT + + GPT
Sbjct: 205 SSPAPSSAQRPAETQQTQDSAAPSTPAAPSPPQRPAETQQTQDSTAPGTPAAPSPQGPTA 264
Query: 89 ----------APTATP 94
PT TP
Sbjct: 265 ESPSQADHPTKPTQTP 280
>M.Javanica_Scaff29466g096371 on XP_804613 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 881
Score = 23.1 bits (48), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Query: 41 GVSSTAPTTTVGPSGTTTTGATPASTASTGPSTSAGTGS 79
G P ++G SG G PAST S+ ++S G GS
Sbjct: 741 GGRQEEPRQSLGSSGA---GVVPASTVSSAKTSSGGEGS 776
>M.Javanica_Scaff29466g096371 on XP_812607 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 957
Score = 23.1 bits (48), Expect = 4.1, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 18/35 (51%)
Query: 54 SGTTTTGATPASTASTGPSTSAGTGSTSTGTGPTG 88
+G+ + S A+T P+ +++GT P+G
Sbjct: 789 AGSGVLSTSAVSIATTSPAAKESEKQSASGTSPSG 823
>M.Javanica_Scaff29466g096371 on XP_819012 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 918
Score = 23.1 bits (48), Expect = 4.2, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Query: 44 STAPTTTVGPSGTTTTGATPASTASTGPSTSAGTGSTSTGTGPTGAPTAT 93
S T +G G TP T P T+ T+T G PTAT
Sbjct: 796 SDGDPTVGAEAGGAMQGDTPPQTPVDTPDTAGANAPTATDVAQVG-PTAT 844
>M.Javanica_Scaff29466g096371 on XP_814246 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1002
Score = 23.1 bits (48), Expect = 4.4, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 11/65 (16%)
Query: 43 SSTAPTTTVGPSGTTTTGATPASTASTGPSTSAG-----------TGSTSTGTGPTGAPT 91
+S+ P ++ GAT A ST P T+ G G+ ST G T P+
Sbjct: 888 ASSGPDSSHSTEVAPMDGATAAHEPSTDPKTAQGHDEVLDGDDAAPGNKSTLPGETKIPS 947
Query: 92 ATPAS 96
+ A+
Sbjct: 948 GSNAT 952
>M.Javanica_Scaff29466g096371 on XP_001352170 MSP1 (Invasion) [Plasmodium falciparum]
Length = 1720
Score = 22.7 bits (47), Expect = 5.7, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 48 TTTVGPSGTTTTGATPASTASTGPSTSAGTGSTSTGTG 85
T++ G TT ++T S + + ST+T G
Sbjct: 910 TSSTSSPGNTTVNTAQSATHSNSQNQQSNASSTNTQNG 947
>M.Javanica_Scaff29466g096371 on AAL15421 MSA-2a1 (Invasion) [Babesia bovis]
Length = 316
Score = 22.3 bits (46), Expect = 5.9, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 63 PASTASTGPSTSAGTGSTSTGTGPTG 88
PA T T ST+ GT + + GPT
Sbjct: 239 PAETQQTQDSTAPGTPAAPSPQGPTA 264
>M.Javanica_Scaff29466g096371 on XP_816303 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 955
Score = 22.7 bits (47), Expect = 5.9, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 26/66 (39%), Gaps = 17/66 (25%)
Query: 40 PGVSSTAPTTTVGPS---------------GTTTTGA--TPASTASTGPSTSAGTGSTST 82
PGVS AP TV S GT GA T ST +T P+ ++
Sbjct: 759 PGVSVPAPRGTVPQSALGGNQPMAQELLKEGTDGGGASTTALSTVTTSPAGKESVDLLAS 818
Query: 83 GTGPTG 88
GT P G
Sbjct: 819 GTSPGG 824
>M.Javanica_Scaff29466g096371 on ABA06450 MSA-2a1 (Invasion) [Babesia bovis]
Length = 316
Score = 22.3 bits (46), Expect = 5.9, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 63 PASTASTGPSTSAGTGSTSTGTGPTG 88
PA T T ST+ GT + + GPT
Sbjct: 239 PAETQQTQDSTAPGTPAAPSPQGPTA 264
>M.Javanica_Scaff29466g096371 on XP_812793 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 920
Score = 22.3 bits (46), Expect = 6.4, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 27/72 (37%), Gaps = 2/72 (2%)
Query: 25 VATTPPVCYCQCESTPGVSSTAPTTTVGPSGTTTTGATPASTASTGPSTSAGTGSTSTGT 84
V + P V S S+T + G+ G AS + + + G S G
Sbjct: 755 VVSAPTVSSAPTSSGEEGSATQVVSEESSDGSENVGG--ASLSDSDAAVETGDRSMVQGD 812
Query: 85 GPTGAPTATPAS 96
G + P TPA+
Sbjct: 813 GSSQTPVGTPAT 824
>M.Javanica_Scaff29466g096371 on XP_807433 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1042
Score = 22.3 bits (46), Expect = 6.4, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 43 SSTAPTTTVGPSGTTTTGATPASTASTGPSTSAG 76
+S+ P ++ + GAT A ST P+T+ G
Sbjct: 928 ASSGPDSSHSTEVASVDGATAAHEPSTDPATAQG 961
>M.Javanica_Scaff29466g096371 on XP_821390 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 940
Score = 22.3 bits (46), Expect = 6.8, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 18/35 (51%)
Query: 54 SGTTTTGATPASTASTGPSTSAGTGSTSTGTGPTG 88
+G+ + S+A+T P+ +++GT P G
Sbjct: 773 AGSGGLSTSAVSSATTSPAAKESENQSASGTSPEG 807
>M.Javanica_Scaff29466g096371 on AAL15425 MSA-2a1 (Invasion) [Babesia bovis]
Length = 311
Score = 22.3 bits (46), Expect = 7.5, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 14/60 (23%)
Query: 43 SSTAPTTTVGPSGTTTTGAT--------------PASTASTGPSTSAGTGSTSTGTGPTG 88
S TAP++ P+ T T + PA T T ST+ GT + + GPT
Sbjct: 205 SPTAPSSPQRPAETQQTQESAAPSTPSAPSPPQRPAETQQTQDSTAPGTPAAPSPQGPTA 264
>M.Javanica_Scaff29466g096371 on XP_804106 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1006
Score = 22.3 bits (46), Expect = 8.1, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 43 SSTAPTTTVGPSGTTTTGATPASTASTGPSTSAGTGSTSTG 83
+S+ P ++ GAT A ST P T+ G G G
Sbjct: 892 ASSGPDSSHSIEVAPLDGATAAHEPSTDPKTAQGHGEVLDG 932
>M.Javanica_Scaff29466g096371 on XP_813616 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1038
Score = 21.9 bits (45), Expect = 9.3, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Query: 25 VATTPPVCYCQCESTPGVSSTAPTTTVGPSGTTTTGATPASTASTGPSTSAGT---GSTS 81
+AT Y + + + +A V +GT TTGA + + G S T ST
Sbjct: 869 MATATASVYGEHQVQQSIELSAENNDVRSTGTGTTGAEQSLSLEVGDRNSERTMNSDSTL 928
Query: 82 TGTGPTGAPTA 92
T + PT+
Sbjct: 929 TSSKSDAEPTS 939
>M.Javanica_Scaff29466g096371 on XP_807743 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 931
Score = 21.9 bits (45), Expect = 9.4, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 57 TTTGATPASTASTGPSTSAGTGSTSTGTGPTGAPTATPAS 96
T + ++PA +GP G G+ T AP+ S
Sbjct: 740 TLSQSSPAGQPPSGPKLLNGNEGAGGGSTSTSAPSTATTS 779
>M.Javanica_Scaff29466g096371 on XP_818848 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1053
Score = 21.9 bits (45), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 22/53 (41%)
Query: 25 VATTPPVCYCQCESTPGVSSTAPTTTVGPSGTTTTGATPASTASTGPSTSAGT 77
+AT Y + + + +A V +GT TTGA + + G S T
Sbjct: 883 MATATASVYGEHQVQQSIELSAENNDVRSTGTGTTGAEQSLSLEVGDRNSERT 935
>M.Javanica_Scaff29466g096371 on XP_807772 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 852
Score = 21.9 bits (45), Expect = 9.5, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 24/63 (38%), Gaps = 3/63 (4%)
Query: 26 ATTP---PVCYCQCESTPGVSSTAPTTTVGPSGTTTTGATPASTASTGPSTSAGTGSTST 82
AT P PV + S TTVG S TT S S G + ++ + +
Sbjct: 762 ATKPSEAPVVQATLQRPRQESEAKQVTTVGKSATTHQLPANTSQGSVGKAAASSSHAVGG 821
Query: 83 GTG 85
TG
Sbjct: 822 ATG 824
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff593g007955
(103 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff28343g094947
(300 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_822006 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 5.6
XP_845143 VSG (Establishment) [Trypanosoma brucei] 25 7.1
XP_001609667 variant erythrocyte surface antigen-1, alpha subun... 25 8.4
>M.Javanica_Scaff28343g094947 on XP_822006 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 845
Score = 25.4 bits (54), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 215 KDNLLDENAPEEQTSAEEMTEELQSSVRILQIRVAR 250
K +LDE + E+ E SS R++++RV R
Sbjct: 148 KTQVLDECSASEERQCPSQAVEPDSSQRVMKLRVGR 183
>M.Javanica_Scaff28343g094947 on XP_845143 VSG (Establishment) [Trypanosoma brucei]
Length = 501
Score = 24.6 bits (52), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 136 IVKRGMLQVVSDDGSKIFATLSEGAVFGEFKNGNRRTA 173
+K+ + + V+ DGSK T +++G +R+TA
Sbjct: 182 TLKQKLTEAVTGDGSKDVDTADYQSIYGASSGSDRQTA 219
>M.Javanica_Scaff28343g094947 on XP_001609667 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1303
Score = 24.6 bits (52), Expect = 8.4, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 192 WIALREYPEARKILINKGRELLRKDNLLDENAPEEQTSAEEMTEELQS 239
W++ Y EA K ++ G+E L K +L + + T+ E + +Q+
Sbjct: 466 WLSALPYSEAYKEMLKHGKERLEK--VLKKPGETDSTNGETQLKFIQT 511
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5262g038589
(676 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAB56644 MIC3 (Adhesin) [Toxoplasma gondii] 42 7e-05
AAK19758 MIC9 (Others) [Toxoplasma gondii] 36 0.005
Q9XYH7 MIC6 (Invasion) [Toxoplasma gondii] 32 0.084
AAX07981 alpha-11 giardin (Others) [Giardia duodenalis] 28 1.6
AAK19757 MIC8 (Invasion) [Toxoplasma gondii] 28 2.0
XP_819343 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 2.1
XP_655415 Hgl (Adhesin) [Entamoeba histolytica] 28 3.0
XP_654447 Igl1 (Adhesin) [Entamoeba histolytica] 27 5.5
XP_652394 Igl2 (Adhesin) [Entamoeba histolytica] 27 5.7
>M.Javanica_Scaff5262g038589 on CAB56644 MIC3 (Adhesin) [Toxoplasma gondii]
Length = 255
Score = 41.6 bits (96), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 46/108 (42%), Gaps = 13/108 (12%)
Query: 117 CKQGWLDTSNDKEHSPGRSCKQSSQC--RNIDCAPEAECVENVLAGQPPICKCQRGYIDV 174
C W+ S+ + P +S C + C AECVEN+ AG CKC+ G++
Sbjct: 122 CSSNWIFCSSSLIYHPDKSYGGDCSCEKQGHRCDKNAECVENLDAGGGVHCKCKDGFVGT 181
Query: 175 SAKQGKLPGRVCLLVRNECLQHGENDCARDANCIDTDE-SFTCKCKDG 221
G C + C + G C + CI D S+TC C DG
Sbjct: 182 --------GLTC--SEDPCSKRGNAKCGPNGTCIVVDSVSYTCTCGDG 219
Score = 33.5 bits (75), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 15/92 (16%)
Query: 93 CTTGKHKCDTNAECIV---TSNGYTCRCKQGWLDTSNDKEHSPGRSCKQS--SQCRNIDC 147
C H+CD NAEC+ G C+CK G++ T G +C + S+ N C
Sbjct: 147 CEKQGHRCDKNAECVENLDAGGGVHCKCKDGFVGT--------GLTCSEDPCSKRGNAKC 198
Query: 148 APEAECVENVLAGQPPICKCQRGYIDVSAKQG 179
P C+ V+ C C G V+ +G
Sbjct: 199 GPNGTCI--VVDSVSYTCTCGDGETLVNLPEG 228
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Query: 633 CANQAHDCSPFAECV---DATDGFACICKEGFV 662
C Q H C AECV DA G C CK+GFV
Sbjct: 147 CEKQGHRCDKNAECVENLDAGGGVHCKCKDGFV 179
>M.Javanica_Scaff5262g038589 on AAK19758 MIC9 (Others) [Toxoplasma gondii]
Length = 255
Score = 35.8 bits (81), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 38/93 (40%), Gaps = 12/93 (12%)
Query: 39 NPCQDYSLNDCDPVAECDSDQPGYFQCKCPSGYLDVSPDKVKMPGRICKKVE----NECT 94
PC + V C P + C C SGY ++ ++ G C+K + N C
Sbjct: 161 TPCSSQPCGGPEAVEACLVTGPTTYSCTCASGYETITTEQ----GERCEKTDPCLSNPCG 216
Query: 95 TGKHKCDTNAECIVTSNGYTCRCKQGWLDTSND 127
K+ C T+ GYTC C +G T +D
Sbjct: 217 ASKYV----QSCTATNTGYTCECVKGAKKTGSD 245
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 77/195 (39%), Gaps = 33/195 (16%)
Query: 97 KHKCDTNAECI--VTSNGYTCRCKQGWLDTSNDKEHSPGRSCKQSSQCRNIDCAPEAECV 154
++ C + CI ++++ YT C+ G+++ + + + C++ C C +
Sbjct: 70 RNPCGPHGNCIPNLSTDTYTWSCEGGYVEAAVSGKPT----CQRKDPCDTSPCGTKEAVK 125
Query: 155 ENVLAGQPPICKCQRGYIDVSAKQGKLPGRVCLLVRNECLQHGENDC----ARDANCIDT 210
E GQ C CQ GY VS G C +++ C A +A +
Sbjct: 126 ECRPNGQYYACICQAGYQVVSTDTGSR----CQRIKSTTTPCSSQPCGGPEAVEACLVTG 181
Query: 211 DESFTCKCKDGYNDESPQKDKKPGRICSRKNLPSTPECDVNDP---MSCDSTRH-EACQF 266
+++C C GY + ++ ++ C+ DP C ++++ ++C
Sbjct: 182 PTTYSCTCASGYETITTEQGER---------------CEKTDPCLSNPCGASKYVQSCTA 226
Query: 267 MSGTYRCACANGYSR 281
+ Y C C G +
Sbjct: 227 TNTGYTCECVKGAKK 241
Score = 29.3 bits (64), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 12/122 (9%)
Query: 314 FSCKCKSDYVDVSPPGSRSGILCRQRVNECSAP--KQYAVDCDSNANCIDTD-DSFICRC 370
++C C++ Y VS + +G C QR+ + P Q ++ C+ T ++ C C
Sbjct: 134 YACICQAGYQVVS---TDTGSRC-QRIKSTTTPCSSQPCGGPEAVEACLVTGPTTYSCTC 189
Query: 371 RPGFVDISEQFNRLPGRRCIEAVNECLDSKLNDCSEHAICEDSKESYTCKCKTGFLDTSP 430
G+ I+ + G RC E + CL + C + YTC+C G T
Sbjct: 190 ASGYETITTEQ----GERC-EKTDPCLSNPCGASKYVQSCTATNTGYTCECVKGAKKTGS 244
Query: 431 DA 432
D+
Sbjct: 245 DS 246
Score = 26.6 bits (57), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 14/115 (12%)
Query: 39 NPCQDYSLNDCDPVAECDSDQPGYFQCKCPSGYLDVSPDKVKMPGRICKKVENECTT-GK 97
+PC + V EC + Y+ C C +GY VS D G C+++++ T
Sbjct: 111 DPCDTSPCGTKEAVKECRPNGQ-YYACICQAGYQVVSTDT----GSRCQRIKSTTTPCSS 165
Query: 98 HKC---DTNAECIVTS-NGYTCRCKQGWLDTSNDKEHSPGRSCKQSSQCRNIDCA 148
C + C+VT Y+C C G+ + ++ G C+++ C + C
Sbjct: 166 QPCGGPEAVEACLVTGPTTYSCTCASGYETITTEQ----GERCEKTDPCLSNPCG 216
>M.Javanica_Scaff5262g038589 on Q9XYH7 MIC6 (Invasion) [Toxoplasma gondii]
Length = 255
Score = 32.0 bits (71), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 80/216 (37%), Gaps = 26/216 (12%)
Query: 38 ANPCQDYSLNDCDPVAECDSDQPGYFQCKCPSGY-LDVSPDKVK--MPGRICKKVENECT 94
NPC + C + P + C+C GY L V D+V MP + + +
Sbjct: 42 GNPCGGTAAGTC-------INTPSGYDCRCEPGYVLGVENDQVTCMMPSGVPMANFVQLS 94
Query: 95 TGKHKCDTN-------AECIVTSNGYTCRCKQGWLDTSNDKEHSPGRSCKQSSQCRNIDC 147
C +N C T++GY CRC QG+ S D + +Q S C C
Sbjct: 95 ETPAACSSNPCGPEAAGTCKETNSGYICRCNQGYR-ISLDGTGNVTCIVRQESGCEENGC 153
Query: 148 AP--EAECVENVLAGQPPICKCQRGYI-DVSAKQGKLPGRVCLLVRNECLQHGENDCARD 204
P + + +C C+ +I + A RV R + G +
Sbjct: 154 GPPDAVQSCRRLTGTAGRLCVCKENFIATIDASAHITCKRVPPHYRKPPFEFG-----KG 208
Query: 205 ANCIDTDESFTCKCKDGYNDESPQKDKKPGRICSRK 240
+ +D++ S + +G + E +PGR R+
Sbjct: 209 GHPVDSEPSKRQREDEGESREPESDSTEPGRDQERR 244
Score = 29.6 bits (65), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 31/78 (39%), Gaps = 9/78 (11%)
Query: 357 ANCIDTDDSFICRCRPGFVDISEQ-------FNRLPGRRCIEAVNECLDSKLNDCSEHA- 408
CI+T + CRC PG+V E + +P ++ N C A
Sbjct: 51 GTCINTPSGYDCRCEPGYVLGVENDQVTCMMPSGVPMANFVQLSETPAACSSNPCGPEAA 110
Query: 409 -ICEDSKESYTCKCKTGF 425
C+++ Y C+C G+
Sbjct: 111 GTCKETNSGYICRCNQGY 128
>M.Javanica_Scaff5262g038589 on AAX07981 alpha-11 giardin (Others) [Giardia duodenalis]
Length = 255
Score = 28.1 bits (61), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 12/84 (14%)
Query: 321 DYVDVSPPGSRSGILCRQRVNECSAPKQYAVDCDSNA---NCIDTDDS--------FICR 369
D+VD P S + LC + E P+ +V D+ N ID D+ I
Sbjct: 124 DFVDQIPLTSAASYLCHLAIRENRTPRG-SVASDAEVLKHNLIDADEPDHEAVVRLIITS 182
Query: 370 CRPGFVDISEQFNRLPGRRCIEAV 393
+ +I+ +F L G+ EA+
Sbjct: 183 TADEYKEINHRFEVLTGKSVQEAI 206
>M.Javanica_Scaff5262g038589 on AAK19757 MIC8 (Invasion) [Toxoplasma gondii]
Length = 255
Score = 27.7 bits (60), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 14/17 (82%)
Query: 206 NCIDTDESFTCKCKDGY 222
NC++TD+S+ C CK GY
Sbjct: 228 NCVNTDDSYECVCKQGY 244
Score = 26.6 bits (57), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 9/17 (52%), Positives = 14/17 (82%)
Query: 358 NCIDTDDSFICRCRPGF 374
NC++TDDS+ C C+ G+
Sbjct: 228 NCVNTDDSYECVCKQGY 244
>M.Javanica_Scaff5262g038589 on XP_819343 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 953
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 43/113 (38%), Gaps = 25/113 (22%)
Query: 222 YNDESPQKDKKPGRICSRKNLPSTPECDVNDPMSCDSTRHEACQFMSGTYRCACANGYSR 281
YND K+KK +CS N D + ++ D+T H +GT A +G
Sbjct: 623 YND----KEKKWQLLCSGGN-----SEDQSRTLATDTTHHVVILLRNGTQGSAYVDGKPV 673
Query: 282 LPDGRCLAINECLDSRLNDCSPDADCVDETIGFSCKCKSDYVDVSPPGSRSGI 334
L D +C IN + D IG KSD GSR G+
Sbjct: 674 LGDAQCDLIN----------TKDKKISHFYIGGDGGAKSD------SGSRGGV 710
>M.Javanica_Scaff5262g038589 on XP_655415 Hgl (Adhesin) [Entamoeba histolytica]
Length = 1291
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Query: 250 VNDPMSCDSTRHEACQFMSGTYRCACANGYSRLPDGRCLAINECLDSRLNDCSPDADCVD 309
V + CDS +H+ C + T +C +N L CL I C ++ + DC
Sbjct: 615 VQNGNYCDSNKHQICDYTGTTPKCKVSNCTEDLVRDGCL-IKRCNETSKTTYWENVDCSK 673
Query: 310 ETIGFSCKCKSD 321
+ F+ KS+
Sbjct: 674 TEVKFAQDGKSE 685
>M.Javanica_Scaff5262g038589 on XP_654447 Igl1 (Adhesin) [Entamoeba histolytica]
Length = 1101
Score = 26.6 bits (57), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 13/146 (8%)
Query: 336 CRQRVNECSAPKQYAVD----CDSNANCIDTDDSFICRCRPGFVD-ISEQFNRLPGRRCI 390
C ++ C++ K+ V+ C + + + + C C G+V+ S + N++ + C
Sbjct: 946 CEEQETGCNSEKKKIVEECTKCSTKDHIAEVPVNGACVCAYGYVEGTSTEDNKIECQACK 1005
Query: 391 EAVNECLDS-KLNDCSEHAICEDSKESYTCKCKTGFLDTS-----PDARKYPGRLCIKPT 444
VNE DS DC + C C G+ +S P +R P C K T
Sbjct: 1006 AKVNEFCDSCNSKDCLRCNAEYLEAKGGECVCVEGYYTSSWGSCIPCSRHMP--HCTKCT 1063
Query: 445 QEKESNLTTNPFQLSLDTCDQTKGIY 470
E E + ++L C+ KGI+
Sbjct: 1064 GEGECTTCEDGWKLKDGKCNGAKGIF 1089
>M.Javanica_Scaff5262g038589 on XP_652394 Igl2 (Adhesin) [Entamoeba histolytica]
Length = 1105
Score = 26.6 bits (57), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 13/146 (8%)
Query: 336 CRQRVNECSAPKQYAVD----CDSNANCIDTDDSFICRCRPGFVD-ISEQFNRLPGRRCI 390
C ++ C++ K+ V+ C + + + + C C G+V+ S + N++ + C
Sbjct: 950 CEEQETGCNSEKKKIVEECTKCSTKDHIAEVPVNGACVCAYGYVEGTSTEDNKIECQSCK 1009
Query: 391 EAVNECLDS-KLNDCSEHAICEDSKESYTCKCKTGFLDTS-----PDARKYPGRLCIKPT 444
VNE DS DC + C C G+ +S P +R P C K T
Sbjct: 1010 AKVNEFCDSCNSKDCLRCNAEYLEAKGGECVCVEGYYTSSWGSCIPCSRHMP--HCTKCT 1067
Query: 445 QEKESNLTTNPFQLSLDTCDQTKGIY 470
E E + ++L C+ KGI+
Sbjct: 1068 GEGECTTCEDGWKLKDGKCNGAKGIF 1093
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6656g044899
(93 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609315 variant erythrocyte surface antigen-1, alpha subun... 25 0.81
XP_845633 VSG (Establishment) [Trypanosoma brucei] 25 0.82
CAB51785 gp63 (Invasion) [Leishmania donovani] 24 1.4
CAB51786 gp63 (Invasion) [Leishmania donovani] 24 1.6
CAB51787 gp63 (Invasion) [Leishmania donovani] 24 1.8
CAB51783 gp63 (Invasion) [Leishmania donovani] 24 2.0
CAB51784 gp63 (Invasion) [Leishmania donovani] 24 2.0
AAK49430 gp63 (Invasion) [Leishmania donovani] 23 2.6
XP_805259 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.5
>M.Javanica_Scaff6656g044899 on XP_001609315 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1338
Score = 25.0 bits (53), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Query: 38 VSEEQAKQQICQGNLLFSLCIS---QAYSECAWCNDGNFKGKYRC 79
V EEQ+ + +G + AY EC W + N ++RC
Sbjct: 255 VEEEQSYRSAYRGRYRSDSYVGGTITAYRECMWNSPTNTTSRHRC 299
>M.Javanica_Scaff6656g044899 on XP_845633 VSG (Establishment) [Trypanosoma brucei]
Length = 488
Score = 25.0 bits (53), Expect = 0.82, Method: Composition-based stats.
Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Query: 68 CNDGNFKGKYRCDTKSSHK-GKCK 90
C + K KY DT HK GKCK
Sbjct: 429 CKEDTEKSKYIADTDCEHKDGKCK 452
>M.Javanica_Scaff6656g044899 on CAB51785 gp63 (Invasion) [Leishmania donovani]
Length = 255
Score = 24.3 bits (51), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 62 YSECAWCNDGNFKGKYRCDTKSSHKGKCKDL 92
+S+ A C DG F+ K R + G C ++
Sbjct: 220 FSDAARCIDGAFRPKNRTAADGYYAGLCANV 250
>M.Javanica_Scaff6656g044899 on CAB51786 gp63 (Invasion) [Leishmania donovani]
Length = 255
Score = 23.9 bits (50), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 62 YSECAWCNDGNFKGKYRCDTKSSHKGKCKDL 92
+S+ A C DG F+ K R + G C ++
Sbjct: 208 FSDAARCIDGAFRPKNRTAADGYYAGLCANV 238
>M.Javanica_Scaff6656g044899 on CAB51787 gp63 (Invasion) [Leishmania donovani]
Length = 255
Score = 23.9 bits (50), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 62 YSECAWCNDGNFKGKYRCDTKSSHKGKCKDL 92
+S+ A C DG F+ K R + G C ++
Sbjct: 213 FSDAARCIDGAFRPKNRTAADGYYAGLCANV 243
>M.Javanica_Scaff6656g044899 on CAB51783 gp63 (Invasion) [Leishmania donovani]
Length = 255
Score = 23.9 bits (50), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 62 YSECAWCNDGNFKGKYRCDTKSSHKGKCKDL 92
+S+ A C DG F+ K R + G C ++
Sbjct: 207 FSDAARCIDGAFRPKNRTAADGYYAGLCANV 237
>M.Javanica_Scaff6656g044899 on CAB51784 gp63 (Invasion) [Leishmania donovani]
Length = 255
Score = 23.9 bits (50), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 62 YSECAWCNDGNFKGKYRCDTKSSHKGKCKDL 92
+S+ A C DG F+ K R + G C ++
Sbjct: 210 FSDAARCIDGAFRPKNRTAADGYYAGLCANV 240
>M.Javanica_Scaff6656g044899 on AAK49430 gp63 (Invasion) [Leishmania donovani]
Length = 255
Score = 23.5 bits (49), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 62 YSECAWCNDGNFKGKYRCDTKSSHKGKCKDL 92
+S+ A C DG F+ K R + G C ++
Sbjct: 202 FSDAARCIDGAFRPKNRTAANGYYAGLCANV 232
>M.Javanica_Scaff6656g044899 on XP_805259 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 800
Score = 22.7 bits (47), Expect = 5.5, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
Query: 29 KTLSAPKGVVSEEQAKQQICQGNLLFSLCISQAYSECAWCNDGNFKGKYRCDTKSSH 85
+TL PKG S+E + +L+ + + A++E G+ +Y + KS++
Sbjct: 85 QTLVVPKGGTSQETKRDAFASPSLVSAGGVIAAFAE------GHMYAEYVVEGKSTN 135
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff27210g093427
(120 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum] 25 2.1
>M.Javanica_Scaff27210g093427 on XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2858
Score = 24.6 bits (52), Expect = 2.1, Method: Composition-based stats.
Identities = 9/15 (60%), Positives = 12/15 (80%)
Query: 89 LNKNCRTHQAESMDT 103
L +NCRT + ES+DT
Sbjct: 2014 LQENCRTDRNESLDT 2028
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff8371g051710
(64 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351564 PfEMP1 (Establishment) [Plasmodium falciparum] 24 0.85
XP_805354 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.1
XP_001349738 PfEMP1 (Establishment) [Plasmodium falciparum] 23 2.4
XP_815315 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 3.1
XP_803204 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 3.5
XP_815514 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.6
XP_001350935 PfEMP1 (Establishment) [Plasmodium falciparum] 21 7.8
XP_001608670 variant erythrocyte surface antigen-1, alpha subun... 21 9.3
>M.Javanica_Scaff8371g051710 on XP_001351564 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2207
Score = 23.9 bits (50), Expect = 0.85, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 12/19 (63%), Gaps = 1/19 (5%)
Query: 24 NCDK-WADPSTLPGCGEGC 41
+CDK DP+TLP G C
Sbjct: 1264 DCDKVHEDPTTLPDLGSSC 1282
>M.Javanica_Scaff8371g051710 on XP_805354 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 403
Score = 22.7 bits (47), Expect = 2.1, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 11/53 (20%)
Query: 13 SIALILYVNEIN---------CDKWADPSTLPGCGEGCCYGIDVVTCDTGKHR 56
+I+L+LY+ + N D +DPS + EG + + CD G+ R
Sbjct: 280 TISLVLYLQDTNSWKLSKGMSADGCSDPSVVEWEKEGKL--MMMTACDDGRRR 330
>M.Javanica_Scaff8371g051710 on XP_001349738 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2162
Score = 22.7 bits (47), Expect = 2.4, Method: Composition-based stats.
Identities = 10/18 (55%), Positives = 11/18 (61%), Gaps = 1/18 (5%)
Query: 25 CDK-WADPSTLPGCGEGC 41
CDK DP+TLP G C
Sbjct: 1224 CDKIHKDPTTLPDLGYSC 1241
>M.Javanica_Scaff8371g051710 on XP_815315 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 799
Score = 22.3 bits (46), Expect = 3.1, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 23/50 (46%), Gaps = 6/50 (12%)
Query: 13 SIALILYVNEINCDKWADPSTLPGCGEGCCYGID------VVTCDTGKHR 56
+++LI+Y +EI K + + GC + + + CD G+ R
Sbjct: 285 AVSLIIYSSEIGSGKLSKGMSADGCSDPSVVEREKGKLMMMTACDDGRRR 334
>M.Javanica_Scaff8371g051710 on XP_803204 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 700
Score = 21.9 bits (45), Expect = 3.5, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 11/53 (20%)
Query: 13 SIALILYVNEIN---------CDKWADPSTLPGCGEGCCYGIDVVTCDTGKHR 56
+++L+LY+ + N D +DPS + EG + + CD G+ R
Sbjct: 276 TVSLVLYLQDTNSWKLSKGMSADGCSDPSVVEWEKEGKL--MMMTACDDGRRR 326
>M.Javanica_Scaff8371g051710 on XP_815514 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 811
Score = 21.6 bits (44), Expect = 5.6, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
Query: 13 SIALILYVNEINCDKWADPSTLPGCGEGCCYG------IDVVTCDTGKHR 56
+++LI+Y ++I K + + GCG+ + + CD G+ R
Sbjct: 287 TVSLIIYSSDIASWKLSKGMSADGCGDPSVVEWKDKKLMMMTACDDGRRR 336
>M.Javanica_Scaff8371g051710 on XP_001350935 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2268
Score = 21.2 bits (43), Expect = 7.8, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 11/47 (23%)
Query: 24 NCDKWAD-PSTLPGC------GEGCCYGIDVVTCDTGKHRCNCNSCT 63
NC++ D TL C G+G Y D DT KH NC C+
Sbjct: 1382 NCNEAKDFLKTLGPCRTNDESGKGTLYFDD----DTFKHADNCKPCS 1424
>M.Javanica_Scaff8371g051710 on XP_001608670 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1320
Score = 20.8 bits (42), Expect = 9.3, Method: Composition-based stats.
Identities = 8/23 (34%), Positives = 9/23 (39%)
Query: 42 CYGIDVVTCDTGKHRCNCNSCTC 64
C G D C G+H C C
Sbjct: 1139 CTGCDPNKCKKGEHGQGSGQCGC 1161
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6116g042515
(240 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350082 Rh2b (Adhesin) [Plasmodium falciparum] 28 0.52
AAK31236 variable surface protein 21d (Establishment) [Giardi... 26 1.6
XP_001611737 variant erythrocyte surface antigen-1, beta subuni... 27 1.7
AAK31230 variable surface protein 14d (Establishment) [Giard... 26 1.8
XP_001349033 PfEMP1 (Establishment) [Plasmodium falciparum] 26 2.1
XP_815166 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.9
AAK31239 variable surface protein 42a (Establishment) [Giardi... 25 3.2
XP_816558 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.2
XP_821154 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.7
XP_808639 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 5.7
AAK31243 variable surface protein 42e (Establishment) [Giardi... 24 5.8
XP_814443 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.1
XP_817994 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.3
AAK31226 variable surface protein 7c (Establishment) [Giardia... 24 8.6
XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum] 24 9.3
XP_819719 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 9.9
XP_807804 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 9.9
>M.Javanica_Scaff6116g042515 on XP_001350082 Rh2b (Adhesin) [Plasmodium falciparum]
Length = 1115
Score = 28.1 bits (61), Expect = 0.52, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 30 VDTTDRDDEKQVGKDTRKDITISKDGKDMHDTENTAIDKKVGTTKNTNTK 79
+D+TD+ D G R D IS G D+H ++ I + T +N + +
Sbjct: 856 IDSTDQRDASSHGSSNRDDDEISHVGSDIH-MDSVDIHDSIDTDENADHR 904
>M.Javanica_Scaff6116g042515 on AAK31236 variable surface protein 21d (Establishment) [Giardia
duodenalis]
Length = 127
Score = 25.8 bits (55), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 7/49 (14%)
Query: 167 QCATSKECKECEDDCEDCVEAYSGIVCSKQSCTKCVQKNCYETEECKKC 215
Q ATS C C + C +CV + S +CT+C+ +C KC
Sbjct: 14 QNATSGNCPACAEGCAECVSSIS-------TCTECLAGYYLSGTKCVKC 55
>M.Javanica_Scaff6116g042515 on XP_001611737 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1139
Score = 26.6 bits (57), Expect = 1.7, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 26/71 (36%), Gaps = 18/71 (25%)
Query: 93 TDCIEKQQKCKTIAACQSCASTGKECDRCAQDCEYCNVECMTCPTSCQAPNSKCTKCAGQ 152
T+ I K+ C+ +C STG C Q C TC TS G
Sbjct: 156 TEGIGKKCDCQGGGGGGNCCSTGVPSTPCHQ--------CSTCGTSA----------TGH 197
Query: 153 KCNEQEQCSRT 163
KC + C +T
Sbjct: 198 KCYQSAYCKKT 208
>M.Javanica_Scaff6116g042515 on AAK31230 variable surface protein 14d (Establishment) [Giardia
duodenalis]
Length = 170
Score = 25.8 bits (55), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 13/66 (19%)
Query: 143 NSKCTKCA-GQKCNEQEQCSR--TSCVQCATSKECKECEDDCEDCVEAYSGIVCSKQSCT 199
N +C CA GQ N Q C +C C+T+ C C +SG + +CT
Sbjct: 52 NGQCQTCANGQSANGQGVCPSCPDNCATCSTTSTCSAC----------FSGYYLTADTCT 101
Query: 200 KCVQKN 205
KC + N
Sbjct: 102 KCTENN 107
>M.Javanica_Scaff6116g042515 on XP_001349033 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2064
Score = 26.2 bits (56), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Query: 96 IEKQQKCKTIAACQSCASTGKECDRCAQDCEYCNVECMTCPTSCQAPNSKCTKCAGQKCN 155
++ Q+ K + AC C GK+ + C Q + EC C +C A + K Q N
Sbjct: 1034 MQSQEYNKLMEACTGCMKKGKDGEGCTQKTQ----ECALCKAACDAYKKEIEKWQRQWNN 1089
Query: 156 EQ 157
Q
Sbjct: 1090 MQ 1091
>M.Javanica_Scaff6116g042515 on XP_815166 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 894
Score = 25.8 bits (55), Expect = 2.9, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 31/80 (38%), Gaps = 4/80 (5%)
Query: 40 QVGKDTRKDITISKDGKDMHDTENTAIDKKVGTTKNTNTKTTTGGQPCNTQTCTDCIEKQ 99
+VG D GK+ + + T I ++ T + TK TQ +C +
Sbjct: 97 KVGSDVFAVAEAQCKGKNDNKEDFTGIASELLTLSDEQTKVELDKTKLRTQVLLECSADK 156
Query: 100 QKCKTIAACQSCASTGKECD 119
+KC A Q+ A G D
Sbjct: 157 EKC----ASQNAALEGASAD 172
>M.Javanica_Scaff6116g042515 on AAK31239 variable surface protein 42a (Establishment) [Giardia
duodenalis]
Length = 173
Score = 25.0 bits (53), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 7/57 (12%)
Query: 145 KCTKCAGQKCNEQEQCSRTSCVQCATSKECKECEDDCEDCVEAYSGIVCSKQSCTKC 201
KCTKCA NEQ + SC C C +C D C E +G S +C KC
Sbjct: 50 KCTKCA----NEQTPDQQGSCPACPAG--CSKCS-DANTCTECLAGYYLSGTTCVKC 99
>M.Javanica_Scaff6116g042515 on XP_816558 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 813
Score = 25.4 bits (54), Expect = 3.2, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 135 CPTSCQAPNSKCTKCAGQKCNEQEQCSRTSCV 166
CP+ S+ T CAG +C SR + V
Sbjct: 157 CPSQEAKCPSQSTNCAGSQCFHSAHVSRPTTV 188
>M.Javanica_Scaff6116g042515 on XP_821154 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 951
Score = 25.0 bits (53), Expect = 4.7, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 56 KDMHDTENTAIDKKVGTTKNTNTKTTTGGQPCNTQTCT 93
+ ++D+E TA++ K+ K TKT G P ++ T
Sbjct: 728 RPLNDSEITALNTKLSIPKAEGTKTVMGTPPEASKQAT 765
>M.Javanica_Scaff6116g042515 on XP_808639 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 949
Score = 24.6 bits (52), Expect = 5.7, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 56 KDMHDTENTAIDKKVGTTKNTNTKTTTGGQP 86
+ ++D E +A++ K+ +K +TKT G P
Sbjct: 716 RPLNDDEISALNAKLSISKAKDTKTVKKGTP 746
>M.Javanica_Scaff6116g042515 on AAK31243 variable surface protein 42e (Establishment) [Giardia
duodenalis]
Length = 171
Score = 24.3 bits (51), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 7/59 (11%)
Query: 143 NSKCTKCAGQKCNEQEQCSRTSCVQCATSKECKECEDDCEDCVEAYSGIVCSKQSCTKC 201
+ KCTKCA NEQ + SC C C +C D C E +G S C KC
Sbjct: 48 SGKCTKCA----NEQTPDQQGSCPACPAG--CSKCS-DANTCTECLAGYYLSGTKCVKC 99
>M.Javanica_Scaff6116g042515 on XP_814443 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 924
Score = 24.6 bits (52), Expect = 6.1, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 31/92 (33%), Gaps = 2/92 (2%)
Query: 28 PGVDTTD--RDDEKQVGKDTRKDITISKDGKDMHDTENTAIDKKVGTTKNTNTKTTTGGQ 85
P V T +D +QV D T + DG D E T T + + T G
Sbjct: 768 PTVSTPSAGKDSLQQVASGKSSDGTQTVDGGSFSDGEPTVETGDRSTVQGDGSSQTPVGT 827
Query: 86 PCNTQTCTDCIEKQQKCKTIAACQSCASTGKE 117
P E KT + AS+G +
Sbjct: 828 PATADAYAPNAEAMGHDKTAVNPGASASSGAD 859
>M.Javanica_Scaff6116g042515 on XP_817994 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 954
Score = 24.6 bits (52), Expect = 6.3, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 56 KDMHDTENTAIDKKVGTTKNTNTKTTTGGQP 86
+ ++D E TA++ K+ K +TKT G P
Sbjct: 722 RPLNDDEITALNAKLSIPKAKDTKTMAGDTP 752
>M.Javanica_Scaff6116g042515 on AAK31226 variable surface protein 7c (Establishment) [Giardia
duodenalis]
Length = 163
Score = 23.9 bits (50), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 36/102 (35%), Gaps = 22/102 (21%)
Query: 77 NTKTTTGGQPCNTQT---CTDCIEKQQKCKTIAACQSCASTGKECDRCAQDCEYCNV--- 130
NTK G C T T CT C QQ T C CA+ C C+
Sbjct: 21 NTKALPGSAVCTTATSGSCTTCANGQQY------------TNNNCPACAEGCSACSNGNT 68
Query: 131 -ECMTCPTSCQAPNSKCTKCAGQKCNEQEQC--SRTSCVQCA 169
+C C NSKC KC NE +CV CA
Sbjct: 69 QQCTKCFAGYYLSNSKCLKCTADS-NEGSNAITGVPNCVSCA 109
>M.Javanica_Scaff6116g042515 on XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3346
Score = 24.3 bits (51), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 93 TDCIEK-QQKCKTIAACQSCASTGKECDRC--AQDCEYCNVECMTCPTSCQ 140
T +EK Q +CK ++ C G +CD +D + +C++C SC+
Sbjct: 1841 THKLEKIQNECKGVSGTNQCDDDGFDCDEMCPKKDGSFETFKCLSCAKSCR 1891
>M.Javanica_Scaff6116g042515 on XP_819719 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1053
Score = 23.9 bits (50), Expect = 9.9, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 36 DDEKQVGKDTRKDITISKDGKDMHDTENTAIDKKVGTT 73
D E V K+ ++D T S+ KD D + +KK +
Sbjct: 766 DSETFVIKEVKQDATSSQQRKDAQDRSSEEENKKTAAS 803
>M.Javanica_Scaff6116g042515 on XP_807804 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1054
Score = 23.9 bits (50), Expect = 9.9, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 36 DDEKQVGKDTRKDITISKDGKDMHDTENTAIDKKVGTT 73
D E V K+ ++D T S+ KD D + +KK +
Sbjct: 767 DSETFVIKEVKQDATSSQQRKDAQDRSSEEENKKTAAS 804
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5785g041039
(128 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff27134g093330
(98 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350413 PfEMP1 (Establishment) [Plasmodium falciparum] 27 0.29
XP_803334 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.2
XP_807772 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.3
AAN35478 MTRAP (Adhesin) [Plasmodium falciparum] 23 3.9
>M.Javanica_Scaff27134g093330 on XP_001350413 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2860
Score = 26.6 bits (57), Expect = 0.29, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 25 EFLDSIESANLGLQSKIKLPSILQKRKRKEDDKLPN 60
+FL +IE A + K+ LQK+ ++EDD++ +
Sbjct: 664 QFLKTIEKAYGNEDAIEKIQEFLQKKSKQEDDEIKD 699
>M.Javanica_Scaff27134g093330 on XP_803334 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 474
Score = 23.5 bits (49), Expect = 3.2, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 6/38 (15%)
Query: 56 DKLPNSLGASSTLIPLPACL------SEGLKLVEGQKV 87
D +PNS SSTL P + S+G V+GQ+V
Sbjct: 298 DGVPNSGKLSSTLGPTQHVVILLRNGSQGSAYVDGQRV 335
>M.Javanica_Scaff27134g093330 on XP_807772 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 852
Score = 23.5 bits (49), Expect = 3.3, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 45 SILQKRKRKEDDKLPNSLGASSTLIPLPACLSEG 78
+ LQ+ +++ + K ++G S+T LPA S+G
Sbjct: 773 ATLQRPRQESEAKQVTTVGKSATTHQLPANTSQG 806
>M.Javanica_Scaff27134g093330 on AAN35478 MTRAP (Adhesin) [Plasmodium falciparum]
Length = 498
Score = 23.1 bits (48), Expect = 3.9, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 7 PYYVPNLLMNSNNGE-SSLEFLDSIESANLGLQSKI 41
P Y + + NS N E S E LD+IE N+ + +I
Sbjct: 274 PNYTSSSVHNSTNNERKSDEDLDNIEGDNITKEERI 309
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6866g045796
(318 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_807074 Trans-sialidase (Invasion) [Trypanosoma cruzi] 31 0.12
XP_804548 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.71
XP_805084 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.5
XP_812311 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.8
>M.Javanica_Scaff6866g045796 on XP_807074 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 822
Score = 30.8 bits (68), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 41/106 (38%), Gaps = 29/106 (27%)
Query: 100 PVIIVHGITNSAGQFEQIRQYFLTHGYGDEEVYATTYGDAGKTNVLFVTMQCHYVKMIRL 159
P +IV G + Y L GY Y T++GDA ++L L
Sbjct: 129 PTVIVKGN----------KIYVLVGGYNSSRSYWTSHGDASDWDIL-------------L 165
Query: 160 MIQTVAQYTTSKVNIIGISMGSPIARK----AIMGGNCVDTNDYLG 201
+ V + T I GSP++ K A M G + TN +LG
Sbjct: 166 AVGEVKKCTVDDKTAASIKWGSPVSLKEFFPAEMEG--MQTNQFLG 209
>M.Javanica_Scaff6866g045796 on XP_804548 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 691
Score = 28.1 bits (61), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 32/87 (36%), Gaps = 23/87 (26%)
Query: 100 PVIIVHGITNSAGQFEQIRQYFLTHGYGDEEVYATTYGDAGKTNVLFVTMQCHYVKMIRL 159
P +IV G + Y L GY Y T +GDA ++L L
Sbjct: 118 PTVIVKGN----------KLYVLVGGYNSSTTYWTWHGDASDWDIL-------------L 154
Query: 160 MIQTVAQYTTSKVNIIGISMGSPIARK 186
+ V + T I+ GSP++ K
Sbjct: 155 AVGEVTKCTVDGKTTANITWGSPVSLK 181
>M.Javanica_Scaff6866g045796 on XP_805084 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 828
Score = 27.3 bits (59), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 111 AGQFEQIRQYFLTHGYGDEEVYA--TTYGDAGKTNVLFVTMQCHYVKMIRLMIQT 163
AG F+Q +F+T + E++A YG+ G + LF T ++ I ++QT
Sbjct: 388 AGSFDQ--SFFITLLHKKGELFALYAKYGEDGASGGLFFTRLTEQMRQINFLLQT 440
>M.Javanica_Scaff6866g045796 on XP_812311 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 924
Score = 25.0 bits (53), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 9/52 (17%)
Query: 104 VHGITNSAGQFEQIRQYFLTHGYGDEEVYATTYGDAGKTNVLFVTMQCHYVK 155
V G + GQ + +R F+T AT D K NV+ VT+ + K
Sbjct: 346 VWGNNKNGGQAKAVRSGFIT---------ATVGNDGDKRNVMLVTLPVYSEK 388
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3417g029040
(61 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_843647 VSG (Establishment) [Trypanosoma brucei] 24 0.74
>M.Javanica_Scaff3417g029040 on XP_843647 VSG (Establishment) [Trypanosoma brucei]
Length = 543
Score = 23.9 bits (50), Expect = 0.74, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 10 LFGLFLLLAHSLQQDGFHLATLEMIGIKIPKIPGITSEELEQFKKAFSLDLI 61
L+ +FLLL H+L DG ++ G K + +T++ + + +A L ++
Sbjct: 21 LWVMFLLLFHALNVDGNSKGAIQ--GAKWKPLCTLTADANKVYNRALKLQIL 70
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff30633g097748
(56 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7046g046514
(177 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_816557 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.0
XP_811521 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.1
XP_001349030 PfEMP1 (Establishment) [Plasmodium falciparum] 26 1.8
XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum] 25 2.8
XP_965999 PfEMP1 (Establishment) [Plasmodium falciparum] 25 3.5
XP_001609935 variant erythrocyte surface antigen-1, alpha subun... 25 4.5
XP_001610721 variant erythrocyte surface antigen-1, alpha subun... 24 5.2
>M.Javanica_Scaff7046g046514 on XP_816557 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 834
Score = 26.6 bits (57), Expect = 1.0, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
Query: 54 QPVAQQAPPPVPVCSPQLPPPPAPLCAPAFPALPTL 89
+P + AP PV +P LP P P PA P T+
Sbjct: 744 EPQVKIAPKPV---APALPAVPGPREVPAAPGRTTV 776
>M.Javanica_Scaff7046g046514 on XP_811521 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 830
Score = 26.6 bits (57), Expect = 1.1, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
Query: 54 QPVAQQAPPPVPVCSPQLPPPPAPLCAPAFPALPTL 89
+P + AP PV +P LP P P PA P T+
Sbjct: 740 EPQVKIAPKPV---APALPAVPGPREVPAAPGRTTV 772
>M.Javanica_Scaff7046g046514 on XP_001349030 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 25.8 bits (55), Expect = 1.8, Method: Composition-based stats.
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 48 TSSCNCQPVAQQAPPPVPVCSPQLPPP 74
T + +CQ + PPP + LPPP
Sbjct: 787 TDAKDCQQKCDKKPPPPETPARNLPPP 813
>M.Javanica_Scaff7046g046514 on XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3954
Score = 25.0 bits (53), Expect = 2.8, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Query: 111 CSSCSSNVAAAPLPPPPPPPPAPLCSSGCCGSSNANCNPPNNNQ 154
C + SSN + PP P + L +S G+S A C PP Q
Sbjct: 1729 CINDSSNTTRSS--PPAPVASSTLSTSPEAGAS-ATCIPPRRQQ 1769
>M.Javanica_Scaff7046g046514 on XP_965999 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1325
Score = 25.0 bits (53), Expect = 3.5, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 144 NANCNPPNNNQAAYANNN--RHNNNNNNQGG 172
N N N + N AY N++ R N NN+N G
Sbjct: 100 NRNQNRFDENAEAYCNSDKIRGNENNSNAGA 130
>M.Javanica_Scaff7046g046514 on XP_001609935 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1317
Score = 24.6 bits (52), Expect = 4.5, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 101 QLPTFGNSFGCSSCSSNVAAAPLPPPPPPPPAPLC 135
QL + NS CS+C + +A PP P P C
Sbjct: 834 QLISICNSPKCSACDQH--SAKCGKPPVPRQCPTC 866
>M.Javanica_Scaff7046g046514 on XP_001610721 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1331
Score = 24.3 bits (51), Expect = 5.2, Method: Composition-based stats.
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 39 GGTGGGACSTSSCNC 53
GGT G +C+ +C C
Sbjct: 199 GGTSGDSCTAETCKC 213
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7429g048062
(443 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4g000104
(213 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_829784 VSG (Establishment) [Trypanosoma brucei] 24 9.7
>M.Javanica_Scaff4g000104 on XP_829784 VSG (Establishment) [Trypanosoma brucei]
Length = 474
Score = 23.9 bits (50), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 22/97 (22%)
Query: 16 NLVCAGPPIITKDSKLPENRVMKEDKKKI---------------YPEELR-CKINGKKPQ 59
N++C I+T ++ LPE + +E + I Y ++ +G KPQ
Sbjct: 42 NMMCGIRQILTAEADLPEQKDKEEVTRAIQQLIELNLSTAEDSMYDQKFEDDSSDGDKPQ 101
Query: 60 NFSLPSPYIEDKINLFKAMTLPICGNKYFDKIKLCSL 96
Y E++ KA L GN D IK+ L
Sbjct: 102 Q------YKENRPKWQKAKHLISAGNLEIDSIKILRL 132
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff29902g096887
(109 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_804820 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.3
XP_803132 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.7
XP_819012 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 9.2
>M.Javanica_Scaff29902g096887 on XP_804820 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 954
Score = 24.3 bits (51), Expect = 2.3, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 22 GEHSKEVLEKAQALAQQISMNPASRHNAQLENDDEERDLDAATK 65
GE KE L+K + Q + P N +N EER + TK
Sbjct: 138 GEQKKEELDKTKLKTQVLDKCPFEGGNCPSQNAAEERVSQSETK 181
>M.Javanica_Scaff29902g096887 on XP_803132 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 721
Score = 23.5 bits (49), Expect = 3.7, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 14/33 (42%)
Query: 24 HSKEVLEKAQALAQQISMNPASRHNAQLENDDE 56
H KE L K N A R Q +NDDE
Sbjct: 587 HKKEFLVKPSGDVGNWETNTAIRVTVQKDNDDE 619
>M.Javanica_Scaff29902g096887 on XP_819012 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 918
Score = 22.3 bits (46), Expect = 9.2, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 5/30 (16%)
Query: 48 NAQLENDDEERDLDAATKFDANEKSQRGGG 77
NA ++N DE +D+ KF ++RG G
Sbjct: 524 NATVKNKDEAEQVDSGVKF-----TRRGAG 548
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6553g044454
(139 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001348165 RESA (Others) [plasmodium falciparum] 34 0.002
XP_818689 Trans-sialidase (Invasion) [Trypanosoma cruzi] 31 0.020
XP_805613 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.047
XP_817820 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.063
XP_821910 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.070
XP_821902 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.073
XP_810953 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.10
XP_814492 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.13
XP_819907 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.14
XP_816764 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.15
XP_809198 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.19
XP_815498 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.19
XP_807740 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.21
XP_812607 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.22
XP_811004 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.24
XP_821293 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.32
XP_809902 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.47
XP_817816 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.49
XP_821397 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.49
XP_820303 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.50
XP_821381 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.55
XP_817001 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.65
XP_817003 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.66
XP_818708 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.82
AAY44838 MSA-1 (Invasion) [Babesia bovis] 26 0.85
AAY44835 MSA-1 (Invasion) [Babesia bovis] 26 0.93
XP_802709 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.1
XP_810696 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.2
XP_818399 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.6
XP_829776 VSG (Establishment) [Trypanosoma brucei] 25 2.0
XP_821148 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.4
XP_820300 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.8
XP_821078 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.0
XP_821378 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.0
XP_806556 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.0
XP_808550 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.4
XP_813677 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.4
XP_812811 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.5
AAZ15656 Cathepsin C3 (Protease) [Toxoplasma gondii] 24 4.0
XP_821084 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.5
XP_821438 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.8
XP_827748 VSG (Establishment) [Trypanosoma brucei] 24 5.0
XP_816557 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.7
XP_810574 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 6.5
XP_804330 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 6.5
XP_819343 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 6.8
XP_001351080 PfEMP1 (Establishment) [Plasmodium falciparum] 23 7.1
XP_811304 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 7.6
XP_821388 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 8.3
XP_812793 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 8.9
XP_819530 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 9.0
XP_818892 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 9.5
XP_814219 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 9.6
XP_818893 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 9.9
>M.Javanica_Scaff6553g044454 on XP_001348165 RESA (Others) [plasmodium falciparum]
Length = 1085
Score = 33.9 bits (76), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 20 IPD--HYKTLDVSQNASKDEIKKAYKKLMLKHHPDKNKNDPKALEISQKITEAYGVLSDE 77
IPD +Y L V NA +EI + Y KL ++P + ++ +K+ EAY VL D
Sbjct: 519 IPDTLYYDILGVGVNADMNEITERYFKLAENYYPYQ-RSGSTVFHNFRKVNEAYQVLGDI 577
Query: 78 EKRKNYDKEWRSFYGF 93
+K++ W + YG+
Sbjct: 578 DKKR-----WYNKYGY 588
>M.Javanica_Scaff6553g044454 on XP_818689 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 844
Score = 30.8 bits (68), Expect = 0.020, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 18/48 (37%)
Query: 87 WRSFYGFSNATSSGSPQSPVGSSPTSEGSDFTTSSGNWSEGTQGSTNF 134
WR Y NAT + G+ P G FT + W G QG
Sbjct: 540 WRDEYLGVNATVENNGAEDAGAEPAENGVKFTGAWAEWPVGEQGENQL 587
>M.Javanica_Scaff6553g044454 on XP_805613 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 874
Score = 29.6 bits (65), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 23/51 (45%)
Query: 84 DKEWRSFYGFSNATSSGSPQSPVGSSPTSEGSDFTTSSGNWSEGTQGSTNF 134
+K WR Y NAT + G++ TS+G F + W G+QG
Sbjct: 523 NKTWRDEYLGVNATVKNNGDGETGATKTSDGVKFQGAWAEWPVGSQGENQL 573
>M.Javanica_Scaff6553g044454 on XP_817820 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 896
Score = 29.6 bits (65), Expect = 0.063, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 39/103 (37%), Gaps = 5/103 (4%)
Query: 33 ASKDEIKKAYKKLMLKHHPDKNKNDPKALEISQKITEAYGVLSDEEKRKNYDKEWRSFYG 92
A+ E+ + KL P+K+ + A + G LS +DK WR Y
Sbjct: 541 ATWKEVDEIVSKLCPSGSPEKSASPDDACSAVKVTAGLVGFLSG----NFFDKTWRDEYL 596
Query: 93 FSNATSSGSPQSPVGSSPTS-EGSDFTTSSGNWSEGTQGSTNF 134
NAT G+ ++ S +G F + W G QG
Sbjct: 597 GVNATVKGNDGGAAAATVDSKKGVKFQGAWAEWPVGEQGENQL 639
>M.Javanica_Scaff6553g044454 on XP_821910 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 853
Score = 29.3 bits (64), Expect = 0.070, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Query: 84 DKEWRSFYGFSNATSSGSPQSPVGSSPTSEGSDFTTSSGNWSEGTQGSTNF 134
+ WR Y NAT G+ G++ TS+G F + W G+QG
Sbjct: 538 ENTWRDEYLGVNATVKGND----GATKTSDGVTFQGAWAEWPVGSQGQNQL 584
>M.Javanica_Scaff6553g044454 on XP_821902 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 854
Score = 29.3 bits (64), Expect = 0.073, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Query: 84 DKEWRSFYGFSNATSSGSPQSPVGSSPTSEGSDFTTSSGNWSEGTQGSTNF 134
+ WR Y NAT G+ G++ TS+G F + W G+QG
Sbjct: 538 ENTWRDEYLGVNATVKGND----GATKTSDGVTFQGAWAEWPVGSQGENQL 584
>M.Javanica_Scaff6553g044454 on XP_810953 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 958
Score = 28.9 bits (63), Expect = 0.10, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 33/86 (38%), Gaps = 6/86 (6%)
Query: 51 PDKNKNDPK-ALEISQKITEAY-GVLSDEEKRKNYDKEWRSFYGFSNATSSGSPQSPVGS 108
P + P A + KIT+ G LSD D W+ Y NAT G+ +
Sbjct: 505 PSEEDGSPDDACSPTVKITDGLVGFLSDNFS----DGTWKDEYLGVNATVKGNDDEGKKA 560
Query: 109 SPTSEGSDFTTSSGNWSEGTQGSTNF 134
+ TS G F + W G QG
Sbjct: 561 TKTSNGVKFHGAWAEWPVGKQGENQL 586
>M.Javanica_Scaff6553g044454 on XP_814492 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 923
Score = 28.5 bits (62), Expect = 0.13, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Query: 84 DKEWRSFYGFSNATSSGSPQSPVGSSPTSEGSDFTTSSGNWSEGTQG 130
+ WR Y NAT +S VG++ T++G F + W G QG
Sbjct: 523 ENTWRDEYLGVNATV----KSGVGAAGTTDGVKFRGAGAEWPVGKQG 565
>M.Javanica_Scaff6553g044454 on XP_819907 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 943
Score = 28.5 bits (62), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Query: 84 DKEWRSFYGFSNATSSGSPQSPVGSSPTSEGSDFTTSSGNWSEGTQGSTNF 134
+K WR Y NAT GS G + TS+G F + W G QG
Sbjct: 521 NKTWRDEYLGVNATVKGSA---TGVTKTSDGVKFQGAWAEWPVGAQGENQL 568
>M.Javanica_Scaff6553g044454 on XP_816764 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 868
Score = 28.5 bits (62), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 22/51 (43%)
Query: 84 DKEWRSFYGFSNATSSGSPQSPVGSSPTSEGSDFTTSSGNWSEGTQGSTNF 134
D W+ Y NAT G+ G++ TS+G F + W G QG
Sbjct: 513 DNTWKDEYLGVNATVKGNDDGEKGATKTSDGVQFHGAWAEWPVGEQGENQL 563
>M.Javanica_Scaff6553g044454 on XP_809198 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 832
Score = 28.1 bits (61), Expect = 0.19, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 3/51 (5%)
Query: 84 DKEWRSFYGFSNATSSGSPQSPVGSSPTSEGSDFTTSSGNWSEGTQGSTNF 134
D WR Y NAT G++ TS+G F + W G+QG
Sbjct: 529 DGTWRDEYLGVNATVK---NGAAGATKTSDGVTFRGTWAEWPVGSQGENQL 576
>M.Javanica_Scaff6553g044454 on XP_815498 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 822
Score = 28.1 bits (61), Expect = 0.19, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
Query: 84 DKEWRSFYGFSNAT-SSGSPQSPVGSSPTSEGSDFTTSSGNWSEGTQGSTNF 134
D WR Y NAT SG+ G++ TS+G F + W G+QG
Sbjct: 519 DGTWRDEYLGVNATVKSGA----AGATKTSDGVTFHGAWAEWPVGSQGENQL 566
>M.Javanica_Scaff6553g044454 on XP_807740 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 681
Score = 27.7 bits (60), Expect = 0.21, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 42/105 (40%), Gaps = 8/105 (7%)
Query: 33 ASKDEIKKAYKKLMLKHHPDKNKNDPKALEISQKITEAY-GVLSDEEKRKNYD-KEWRSF 90
A+ E+ KL +K+ + A + KIT+ G LS N+ WR
Sbjct: 473 ATWKEVDGRVSKLCTSESVEKDASTGDACSPTVKITDGLVGFLSG-----NFSGNTWRDE 527
Query: 91 YGFSNATSSGSPQS-PVGSSPTSEGSDFTTSSGNWSEGTQGSTNF 134
Y NAT + G++ TS+G F + W G+QG
Sbjct: 528 YLGVNATVKNKEDAGETGATNTSDGVTFRGAWAEWPVGSQGENQL 572
>M.Javanica_Scaff6553g044454 on XP_812607 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 957
Score = 27.7 bits (60), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 19/48 (39%)
Query: 87 WRSFYGFSNATSSGSPQSPVGSSPTSEGSDFTTSSGNWSEGTQGSTNF 134
WR Y NAT G++ TS+G F + W G QG
Sbjct: 535 WRDEYLGVNATVKKKDDGEAGATKTSDGVKFQGAWAEWPVGAQGENQL 582
>M.Javanica_Scaff6553g044454 on XP_811004 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 933
Score = 27.7 bits (60), Expect = 0.24, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
Query: 84 DKEWRSFYGFSNAT-SSGSPQS-PVGSSPTSEGSDFTTSSGNWSE---GTQGSTNF 134
D WR Y NAT G+ + P G + T+ SD T G W+E G QG
Sbjct: 514 DDTWRDEYLGVNATVKKGTKEGVPAGVAETAGSSDGVTFRGAWAEWPVGRQGENQL 569
>M.Javanica_Scaff6553g044454 on XP_821293 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 786
Score = 27.3 bits (59), Expect = 0.32, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 38/104 (36%), Gaps = 7/104 (6%)
Query: 33 ASKDEIKKAYKKLMLKHHPDKNKNDPKALEISQKITEAY-GVLSDEEKRKNYDKEWRSFY 91
A+ E+ + KL P KN + A + KIT+ G LS D WR Y
Sbjct: 480 ATWREVDERVSKLCPSKSPAKNPSTGNACS-AVKITDGLVGFLSGNFS----DTTWRDEY 534
Query: 92 -GFSNATSSGSPQSPVGSSPTSEGSDFTTSSGNWSEGTQGSTNF 134
G G+ G++ G F + W G+QG
Sbjct: 535 LGVDATVKKGTNGVATGAAKADNGVKFQGAWAEWPVGSQGENQL 578
>M.Javanica_Scaff6553g044454 on XP_809902 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 955
Score = 26.9 bits (58), Expect = 0.47, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 20/51 (39%), Gaps = 4/51 (7%)
Query: 84 DKEWRSFYGFSNATSSGSPQSPVGSSPTSEGSDFTTSSGNWSEGTQGSTNF 134
D WR Y NAT + G+ T G FT + W G+QG
Sbjct: 540 DNTWRDEYLGVNATVKDND----GAKKTDNGVTFTGAWAEWPVGSQGENQL 586
>M.Javanica_Scaff6553g044454 on XP_817816 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 912
Score = 26.9 bits (58), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 38/100 (38%), Gaps = 7/100 (7%)
Query: 37 EIKKAYKKLMLKHHPDKNKNDPKALEISQKITEAYGVLSDEEKRKNY-DKEWRSFYGFSN 95
E+ + KL P+K+ + A + G LS N+ DK WR Y N
Sbjct: 485 EVDERVSKLCPSGSPEKSASPDDACSAAMPTAGLVGFLS-----GNFSDKTWRDEYLGVN 539
Query: 96 ATSSGSPQSPVGSSPTSE-GSDFTTSSGNWSEGTQGSTNF 134
AT G+ ++ S+ G F + W G QG
Sbjct: 540 ATVKGNDGGAAAATVDSDNGVKFQGAWAEWPVGEQGENQL 579
>M.Javanica_Scaff6553g044454 on XP_821397 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 932
Score = 26.9 bits (58), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 40/98 (40%), Gaps = 12/98 (12%)
Query: 44 KLMLKHHPDKNKNDPKALEISQKITEA-YGVLSDEEKRKNY-DKEWRSFYGFSNAT---- 97
KL +K+ + A + KIT+ G LSD N+ D +WR Y NAT
Sbjct: 477 KLCTTSSAEKDASPENACSPTVKITDGLVGFLSD-----NFSDNKWRDEYLGVNATVKKK 531
Query: 98 -SSGSPQSPVGSSPTSEGSDFTTSSGNWSEGTQGSTNF 134
+ G++ TS+G F + W G QG
Sbjct: 532 DGATEDAGETGATKTSDGVIFQGAWAEWPVGKQGENQL 569
>M.Javanica_Scaff6553g044454 on XP_820303 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 873
Score = 26.9 bits (58), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 20/47 (42%)
Query: 84 DKEWRSFYGFSNATSSGSPQSPVGSSPTSEGSDFTTSSGNWSEGTQG 130
+K WR Y NAT + G+ P G F + W G+QG
Sbjct: 522 NKTWRDEYLGVNATVENNGAEDDGAEPAENGVKFQGAWAEWPVGSQG 568
>M.Javanica_Scaff6553g044454 on XP_821381 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 934
Score = 26.6 bits (57), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 40/98 (40%), Gaps = 12/98 (12%)
Query: 44 KLMLKHHPDKNKNDPKALEISQKITEA-YGVLSDEEKRKNY-DKEWRSFYGFSNAT---- 97
KL +K+ + A + KIT+ G LSD N+ D +WR Y NAT
Sbjct: 479 KLCTTSSAEKDASPENACSPTVKITDGLVGFLSD-----NFSDNKWRDEYLGVNATVKKK 533
Query: 98 -SSGSPQSPVGSSPTSEGSDFTTSSGNWSEGTQGSTNF 134
+ G++ TS+G F + W G QG
Sbjct: 534 DGATEDAGETGATKTSDGVIFQGAWAEWPVGKQGENQL 571
>M.Javanica_Scaff6553g044454 on XP_817001 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 928
Score = 26.6 bits (57), Expect = 0.65, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 22/56 (39%), Gaps = 5/56 (8%)
Query: 84 DKEWRSFYGFSNAT-----SSGSPQSPVGSSPTSEGSDFTTSSGNWSEGTQGSTNF 134
D WR Y NAT G+ ++ +S+G FT + W G QG
Sbjct: 515 DDTWRDEYLGVNATVKKGEEEGASAGVAETAESSDGVKFTGAWAEWPVGRQGENQL 570
>M.Javanica_Scaff6553g044454 on XP_817003 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 931
Score = 26.6 bits (57), Expect = 0.66, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 22/56 (39%), Gaps = 5/56 (8%)
Query: 84 DKEWRSFYGFSNAT-----SSGSPQSPVGSSPTSEGSDFTTSSGNWSEGTQGSTNF 134
DK WR Y NAT G+ ++ +S+G F + W G QG
Sbjct: 514 DKTWRDEYLGVNATVKKGTKEGASAEKAETAGSSDGVTFRGAWAEWPVGKQGENQL 569
>M.Javanica_Scaff6553g044454 on XP_818708 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 929
Score = 26.2 bits (56), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 5/56 (8%)
Query: 84 DKEWRSFYGFSNAT-----SSGSPQSPVGSSPTSEGSDFTTSSGNWSEGTQGSTNF 134
DK WR Y NAT G P + + +S+G F + W G+QG
Sbjct: 526 DKTWRDEYLGVNATVKKGAKEGVPAAVAEKAESSDGVTFRGAWAEWPVGSQGENQL 581
>M.Javanica_Scaff6553g044454 on AAY44838 MSA-1 (Invasion) [Babesia bovis]
Length = 266
Score = 25.8 bits (55), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 95 NATSSGSPQSPVGSSPTSEGSDFTTSSGNW 124
N+++ GS +P GS+PT S+ + SGN
Sbjct: 220 NSSTGGSGPAPSGSNPTERESEARSPSGNL 249
>M.Javanica_Scaff6553g044454 on AAY44835 MSA-1 (Invasion) [Babesia bovis]
Length = 270
Score = 25.8 bits (55), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 95 NATSSGSPQSPVGSSPTSEGSDFTTSSGNW 124
N+++ GS +P GS+PT S+ + SGN
Sbjct: 220 NSSTGGSGPAPSGSNPTERESEARSPSGNL 249
>M.Javanica_Scaff6553g044454 on XP_802709 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 626
Score = 25.8 bits (55), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Query: 87 WRSFYGFSNATSSGSPQSPVGSSPTSEGSDFTTSSGNWSEGTQGSTNF 134
WR Y NAT + ++ TS+G +FT + W G QG
Sbjct: 516 WRDEYLGVNATVK-ENEGAARATKTSDGVNFTGAWAEWPVGEQGENQL 562
>M.Javanica_Scaff6553g044454 on XP_810696 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 937
Score = 25.8 bits (55), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 5/56 (8%)
Query: 84 DKEWRSFYGFSNAT-SSGSPQ-SPVGSSPTSEGSDFTTSSGNWSE---GTQGSTNF 134
DK WR Y NAT G+ + + G + T+E SD G W+E G QG
Sbjct: 516 DKTWRDEYLGVNATVKKGTKEGAAAGVAETAESSDGVKFQGAWAEWPVGKQGENQL 571
>M.Javanica_Scaff6553g044454 on XP_818399 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 953
Score = 25.4 bits (54), Expect = 1.6, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 13/77 (16%)
Query: 66 KITEAY-GVLSDEEKRKNYDKE-WRSFYGFSNAT----SSGSPQSP--VGSSPTSEGSDF 117
KIT+ G LSD N+ + WR Y NAT G ++ G++ TS+G F
Sbjct: 513 KITDGLVGFLSD-----NFSNDTWRDEYLGVNATVKNKDGGETENTRETGATKTSDGVKF 567
Query: 118 TTSSGNWSEGTQGSTNF 134
+ W G+QG
Sbjct: 568 HGAWAEWPVGSQGENQL 584
>M.Javanica_Scaff6553g044454 on XP_829776 VSG (Establishment) [Trypanosoma brucei]
Length = 471
Score = 25.0 bits (53), Expect = 2.0, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 42/97 (43%), Gaps = 6/97 (6%)
Query: 30 SQNASKDEIKKAYKKLMLKHHPDKNKNDPKALE-----ISQKITEAYGVLSDEEKRKNYD 84
S+N +KD I A+ + +K ++ P+ E I K+ E G+LS +K+
Sbjct: 252 SENKAKD-IAAAWDAIQVKLQTYATEDWPQKAECTENSICHKVAEQAGLLSQPTPQKSLA 310
Query: 85 KEWRSFYGFSNATSSGSPQSPVGSSPTSEGSDFTTSS 121
++ YG + + + + P + D +T +
Sbjct: 311 EQLSETYGTEDEAVTAKLWKLMLAIPAPKAGDASTKN 347
>M.Javanica_Scaff6553g044454 on XP_821148 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 924
Score = 24.6 bits (52), Expect = 2.4, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 6/50 (12%)
Query: 87 WRSFYGFSNAT------SSGSPQSPVGSSPTSEGSDFTTSSGNWSEGTQG 130
WR Y NAT ++ S + G++ +G FT + W G QG
Sbjct: 512 WRDEYLGVNATVKKKDEAAASTVTKEGAAKAEDGVKFTGAWAEWPVGEQG 561
>M.Javanica_Scaff6553g044454 on XP_820300 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 660
Score = 24.6 bits (52), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 87 WRSFYGFSNAT-SSGSPQSPVGSSPTSEGSDFTTSSGNWSEGTQGSTNF 134
WR Y NAT + G++ TS+G F + W G+QG
Sbjct: 525 WRDEYLGVNATVKKENGDGETGATKTSDGVQFHGAWAEWPVGSQGENQL 573
>M.Javanica_Scaff6553g044454 on XP_821078 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 940
Score = 24.6 bits (52), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
Query: 91 YGFSNATSSGSPQSPVGSSPTSEGSDFTTSSGNWSEGTQGST 132
G +GSPQ PVG S T++ + TT EG G T
Sbjct: 826 VGGDTTQGNGSPQIPVGISDTADANTPTTE----GEGQDGPT 863
>M.Javanica_Scaff6553g044454 on XP_821378 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 934
Score = 24.3 bits (51), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 33/82 (40%), Gaps = 12/82 (14%)
Query: 60 ALEISQKITEA-YGVLSDEEKRKNY-DKEWRSFYGFSNAT-----SSGSPQSPVGSSPTS 112
A + KIT+ G LSD N+ D WR Y NAT + G++ TS
Sbjct: 495 ACSPTVKITDGLVGFLSD-----NFSDNTWRDEYLGVNATVKKKDGATKDAGETGATKTS 549
Query: 113 EGSDFTTSSGNWSEGTQGSTNF 134
+G F + W G QG
Sbjct: 550 DGVTFQGAWAEWPVGKQGENQL 571
>M.Javanica_Scaff6553g044454 on XP_806556 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 844
Score = 24.3 bits (51), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
Query: 87 WRSFYGFSNATSSGSPQSPVGSSPTSEGSDFTTSSGNWSEGTQGSTNF 134
WR Y NAT G+ G++ S+G F + W G+QG
Sbjct: 533 WRDEYLGVNATIKGND----GATEASDGVKFQGAWAEWPVGSQGENQL 576
>M.Javanica_Scaff6553g044454 on XP_808550 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 948
Score = 24.3 bits (51), Expect = 3.4, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 108 SSPTSEGSDFTTSSGNWSEGTQGSTNF 134
++ TS+G +FT + W G+QG
Sbjct: 561 TTKTSDGVNFTGAWAEWPVGSQGENQL 587
>M.Javanica_Scaff6553g044454 on XP_813677 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 945
Score = 24.3 bits (51), Expect = 3.4, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 108 SSPTSEGSDFTTSSGNWSEGTQGSTNF 134
++ TS+G +FT + W G+QG
Sbjct: 561 TTKTSDGVNFTGAWAEWPVGSQGENQL 587
>M.Javanica_Scaff6553g044454 on XP_812811 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 814
Score = 24.3 bits (51), Expect = 3.5, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 3/51 (5%)
Query: 84 DKEWRSFYGFSNATSSGSPQSPVGSSPTSEGSDFTTSSGNWSEGTQGSTNF 134
DK W+ Y NAT +G+ ++ T +G + W G QG
Sbjct: 542 DKTWKDEYLGVNATVTGATKAEPSDGVTFKGRG---AGAQWPVGKQGENQL 589
>M.Javanica_Scaff6553g044454 on AAZ15656 Cathepsin C3 (Protease) [Toxoplasma gondii]
Length = 255
Score = 23.9 bits (50), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 68 TEAYGVLSDEEKRKNYDKEWRSFYGFSNATSSGSPQSPVGS 108
TE L+D+ RKN D R+ + + T P PVG+
Sbjct: 75 TEVELSLTDKLIRKNSDMAPRNNWKYLAVTLPSKPDVPVGT 115
>M.Javanica_Scaff6553g044454 on XP_821084 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 965
Score = 23.9 bits (50), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 4/33 (12%)
Query: 100 GSPQSPVGSSPTSEGSDFTTSSGNWSEGTQGST 132
GSPQ PVG S T++ + TT EG G T
Sbjct: 859 GSPQIPVGISDTADANTPTTE----GEGQDGPT 887
>M.Javanica_Scaff6553g044454 on XP_821438 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 957
Score = 23.9 bits (50), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 4/33 (12%)
Query: 100 GSPQSPVGSSPTSEGSDFTTSSGNWSEGTQGST 132
GSPQ PVG S T++ + TT EG G T
Sbjct: 852 GSPQIPVGISDTADANTPTTE----GEGQDGPT 880
>M.Javanica_Scaff6553g044454 on XP_827748 VSG (Establishment) [Trypanosoma brucei]
Length = 550
Score = 23.9 bits (50), Expect = 5.0, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 20/56 (35%), Gaps = 1/56 (1%)
Query: 83 YDKEWRSFYGFSNATSSGSPQSPVGSSPTSE-GSDFTTSSGNWSEGTQGSTNFGIL 137
Y W +A P + G+ TSE + T + N EG G +L
Sbjct: 293 YQHAWHKLQALDSAEQETKPNATEGAEATSELQAAITNTLHNGQEGAAGQPETAVL 348
>M.Javanica_Scaff6553g044454 on XP_816557 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 834
Score = 23.5 bits (49), Expect = 5.7, Method: Composition-based stats.
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 112 SEGSDFTTSSGNWSEG 127
+EGSD + G+W+EG
Sbjct: 218 AEGSDVSYEGGSWNEG 233
>M.Javanica_Scaff6553g044454 on XP_810574 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 954
Score = 23.5 bits (49), Expect = 6.5, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 94 SNATSSGSPQSPVGSSPTSEGSDFTTSSGNWSEGTQGSTNFGI 136
++ TSSG+ + VG+S + + T G+ + Q T F +
Sbjct: 841 ASVTSSGAASTDVGASSSDDAQTVGTEGGDMMQADQ-PTQFSV 882
>M.Javanica_Scaff6553g044454 on XP_804330 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 910
Score = 23.5 bits (49), Expect = 6.5, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 94 SNATSSGSPQSPVGSSPTSEGSDFTTSSGNWSEGTQGSTNFGI 136
++ TSSG+ + VG+S + + T G+ + Q T F +
Sbjct: 798 ASVTSSGAASTDVGASSSDDAQTVGTEGGDMMQADQ-PTQFSV 839
>M.Javanica_Scaff6553g044454 on XP_819343 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 953
Score = 23.5 bits (49), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 17/39 (43%)
Query: 96 ATSSGSPQSPVGSSPTSEGSDFTTSSGNWSEGTQGSTNF 134
AT G++ TS+G FT + W G+QG
Sbjct: 539 ATEDAGETDDTGATKTSDGVKFTGAWAEWPVGSQGENQL 577
>M.Javanica_Scaff6553g044454 on XP_001351080 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2209
Score = 23.5 bits (49), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 78 EKRKN-YDKEWRSFYGFSNATSSGSPQSPV 106
EK+KN YDKE + YG + T+ + P+
Sbjct: 384 EKQKNKYDKEIKKAYGKNGTTTKETSNGPI 413
>M.Javanica_Scaff6553g044454 on XP_811304 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 892
Score = 23.1 bits (48), Expect = 7.6, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Query: 43 KKLMLKHHPDKNKNDPKALEISQKITEAYGVLSDEEKRKNYDKEWRSFYGFSNAT 97
KKLM+ D + +++ TEA G LS K K RS GF AT
Sbjct: 414 KKLMMMTACDDGRRRVYEFTLTESWTEALGTLSRVWSNKKGAKGVRS--GFITAT 466
>M.Javanica_Scaff6553g044454 on XP_821388 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 907
Score = 23.1 bits (48), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 44 KLMLKHHPDKNKNDPKALEISQKITEA-YGVLSDEEKRKNY-DKEWRSFYGFSNAT---- 97
KL +K+ + A + KIT+ G LS+ N+ + WR Y NAT
Sbjct: 486 KLCTTSSAEKDASPENACSTTVKITDGLVGFLSN-----NFSENTWRDEYLGVNATVKKK 540
Query: 98 -SSGSPQSPVGSSPTSEGSDFTTSSGNWSEGTQ 129
+ G++ TS+G F + W G+Q
Sbjct: 541 DGATEDAGETGATKTSDGVTFQGAWAEWPVGSQ 573
>M.Javanica_Scaff6553g044454 on XP_812793 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 920
Score = 23.1 bits (48), Expect = 8.9, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 106 VGSSPTSEGSDFTTSSGNWSEGTQGSTNFG 135
V S+PTS G + + + E + GS N G
Sbjct: 761 VSSAPTSSGEEGSATQVVSEESSDGSENVG 790
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff8053g050500
(318 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351515 PfEMP1 (Establishment) [Plasmodium falciparum] 28 0.56
XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum] 28 0.69
XP_001349207 EBA-175 (Adhesin) [Plasmodium falciparum] 27 1.4
XP_001349030 PfEMP1 (Establishment) [Plasmodium falciparum] 27 2.3
XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum] 27 2.6
XP_001349737 PfEMP1 (Establishment) [Plasmodium falciparum] 27 2.7
XP_001351563 PfEMP1 (Establishment) [Plasmodium falciparum] 26 3.7
XP_001351514 PfEMP1 (Establishment) [Plasmodium falciparum] 25 5.0
XP_001349032 PfEMP1 (Establishment) [Plasmodium falciparum] 25 5.9
XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum] 25 7.5
XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum] 25 9.1
XP_001350798 PfEMP1 (Establishment) [Plasmodium falciparum] 25 9.7
>M.Javanica_Scaff8053g050500 on XP_001351515 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2181
Score = 28.5 bits (62), Expect = 0.56, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 255 VFAEHLSEDCKR--RFYKNWYKCKKKAFTKYAKKWQDEDGQKSIETDLNKIKKYCAYVR 311
+FA+ DCK+ R YK W + K + F K K++ E K + KK+C ++
Sbjct: 1227 MFADSYCPDCKKACRKYKKWIEKKLEEFQKQKDKYKGEL-DKLTKDKSGGDKKFCEEIK 1284
>M.Javanica_Scaff8053g050500 on XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3346
Score = 28.5 bits (62), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 267 RFYKNWYKCKKKAFTKYAKKWQDE 290
RFYK W KK+ F K +KK+++E
Sbjct: 1891 RFYKKWISRKKEEFDKQSKKYENE 1914
>M.Javanica_Scaff8053g050500 on XP_001349207 EBA-175 (Adhesin) [Plasmodium falciparum]
Length = 1462
Score = 27.3 bits (59), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Query: 252 LKAVFAEHLSED--CKRR--FYKNWYKCKKKAFTKYAKKWQD 289
LK E ED CKR+ YK W KK+ + K AK++Q+
Sbjct: 648 LKVECKEKPCEDDNCKRKCNSYKEWISKKKEEYNKQAKQYQE 689
>M.Javanica_Scaff8053g050500 on XP_001349030 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 26.6 bits (57), Expect = 2.3, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 258 EHLSEDCKR--RFYKNWYKCKKKAFTKYAKKWQDE 290
+ LS C + R YK W + KK + K K ++++
Sbjct: 1273 QDLSSSCAKPCRLYKTWIEKKKTEYEKQKKAYEEQ 1307
>M.Javanica_Scaff8053g050500 on XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2980
Score = 26.6 bits (57), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 249 PRPLKAVFAEHLSEDCKRRFYKNWYKCKKKAFTKYAKKWQDE 290
P + ++ + E+C++ YK W + KK FTK++ + D+
Sbjct: 2066 PSTVPSLKCQSCGEECRK--YKKWIERKKDEFTKHSNAYGDQ 2105
>M.Javanica_Scaff8053g050500 on XP_001349737 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2199
Score = 26.6 bits (57), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 255 VFAEHLSEDCKR--RFYKNWYKCKKKAFTKYAKKWQDEDGQKSIETD 299
+F + L C R RFYK W K+ F K + + ++ + E D
Sbjct: 1308 IFGDLLCPTCARHCRFYKKWINTKRDEFNKQSNAYSEQKKKYEEEND 1354
>M.Javanica_Scaff8053g050500 on XP_001351563 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2149
Score = 26.2 bits (56), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 9/37 (24%)
Query: 263 DCKR--RFYKNW-------YKCKKKAFTKYAKKWQDE 290
DC + RFYK W Y+ ++KA+T KK+++E
Sbjct: 1200 DCGKYCRFYKKWIEKKKTEYENQQKAYTGQKKKYEEE 1236
>M.Javanica_Scaff8053g050500 on XP_001351514 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2201
Score = 25.4 bits (54), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 255 VFAEHLSEDCKR--RFYKNWYKCKKKAFTKYAKKWQDE 290
+FA+ DCK+ R YK W + K + F K K++ E
Sbjct: 1247 MFADSYCPDCKKACRKYKKWIEKKLEEFQKQKDKYKGE 1284
>M.Javanica_Scaff8053g050500 on XP_001349032 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2267
Score = 25.4 bits (54), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 263 DCKR--RFYKNWYKCKKKAFTKYAKKWQDEDGQ-KSIETDLNKIKKYCAYVR 311
DC + R Y+ W + K + F K KK++ E G+ ++ N K+YC ++
Sbjct: 1298 DCYKQCRKYRKWIEKKVEEFHKQEKKYKGEHGKLRNDNCSGNDNKEYCEQIK 1349
>M.Javanica_Scaff8053g050500 on XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2238
Score = 25.0 bits (53), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 7/43 (16%)
Query: 253 KAVFAEHLSEDCKR-----RFYKNWYKCKKKAFTKYAKKWQDE 290
K ++A + +DC + FYK W +K+ F K KK ++E
Sbjct: 354 KGIYA--IGDDCHKCSFWCGFYKKWLANQKQEFLKQKKKCENE 394
>M.Javanica_Scaff8053g050500 on XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2858
Score = 24.6 bits (52), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Query: 260 LSEDCKRRFYKNWYKCKKKAFTKYAKKWQDE 290
++DCK Y+ W + KKK F K +K+++E
Sbjct: 364 CADDCKS--YETWVENKKKEFNKQKEKYKEE 392
>M.Javanica_Scaff8053g050500 on XP_001350798 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2359
Score = 24.6 bits (52), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 6/57 (10%)
Query: 260 LSEDCKRR--FYKNWYKCKKKAFTKYAKKWQDEDGQKS-IETDLNKIKKYCAYVRVI 313
L C R FYK W + KK+ FT+ + GQK+ +T+ K++C +
Sbjct: 1436 LCSTCGRHCSFYKKWIQRKKEEFTEQYNAYG---GQKTKCQTESETAKEFCGTLNTF 1489
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6g000144
(659 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351079 PfEMP1 (Establishment) [Plasmodium falciparum] 30 0.44
XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum] 28 2.7
XP_001351561 PfEMP1 (Establishment) [Plasmodium falciparum] 27 4.7
XP_001348946 PfEMP1 (Establishment) [Plasmodium falciparum] 27 4.7
XP_001351319 PfEMP1 (Establishment) [Plasmodium falciparum] 27 6.3
XP_656029 Amoebapore C (Invasion) [Entamoeba histolytica] 25 6.5
>M.Javanica_Scaff6g000144 on XP_001351079 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2203
Score = 30.4 bits (67), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 182 IIKINDNEAFLVKIDEQFWNELFCLEKGVEKHEKDDKDIKLFFDKYIDKLVEGG 235
I K NDN + +++ E C +K VE+ +K+ ++IK FDK D ++EGG
Sbjct: 642 INKDNDN---TCRNNKKCNKECGCFQKWVEQKKKEWQNIKKHFDKQTDIVIEGG 692
>M.Javanica_Scaff6g000144 on XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2994
Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Query: 62 CFKLEIWLKLKEIQFYRINN-------QFKLGSPQ--NGQVPFIQFNGDFIEGMENI--I 110
C +E W+K+KE ++ +IN + P+ N + F+ DFI +E I
Sbjct: 616 CECVEKWIKIKEAEWKKINQHYNQQKKHYTYSVPRWVNSYLTHQHFSSDFINALEAFKNI 675
Query: 111 NKLKHLGKPLAENKNEKKVEEIVDNILFPILIK 143
L++L + ++ +K+ I D+++ ++ K
Sbjct: 676 RGLENLKECSSDTCKIEKIRTIDDDLIKELISK 708
>M.Javanica_Scaff6g000144 on XP_001351561 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3553
Score = 26.9 bits (58), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 38 NWKENVVYLIRYPRISSLP-DLDVNCFKLEIWLKLKEIQFYRINNQFK 84
NWK ++ I ++ D + NC E W K KE ++ ++ +K
Sbjct: 597 NWKNDLTNCINNTNVTDCKNDCNTNCKCFENWAKTKENEWKKVKTIYK 644
>M.Javanica_Scaff6g000144 on XP_001348946 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3553
Score = 26.9 bits (58), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 38 NWKENVVYLIRYPRISSLP-DLDVNCFKLEIWLKLKEIQFYRINNQFK 84
NWK ++ I ++ D + NC E W K KE ++ ++ +K
Sbjct: 597 NWKNDLTNCINNTNVTDCKNDCNTNCKCFENWAKTKENEWKKVKTIYK 644
>M.Javanica_Scaff6g000144 on XP_001351319 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2646
Score = 26.6 bits (57), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 11/39 (28%)
Query: 171 PKLEELYKKPQIIKINDNEAFLVKIDEQFWNELFCLEKG 209
P LE+ KKPQ ++ ++++ W E FC E+G
Sbjct: 1072 PSLEDFAKKPQFLR------WMIE-----WGEEFCAERG 1099
>M.Javanica_Scaff6g000144 on XP_656029 Amoebapore C (Invasion) [Entamoeba histolytica]
Length = 101
Score = 25.0 bits (53), Expect = 6.5, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 250 INKKDEWIENIVKKYFIEGENNFENMDDKDIKLFFDKYIDKLVEGGNKKQIFDL 303
++K +++E + K + E + K + DK I+K++EGG+ K I L
Sbjct: 48 VDKVTDYLETLCAK----ADGLVETLCTKIVSYGIDKLIEKILEGGSAKLICGL 97
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff284g004387
(390 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_803373 VSG (Establishment) [Trypanosoma brucei] 25 5.7
XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum] 26 5.9
>M.Javanica_Scaff284g004387 on XP_803373 VSG (Establishment) [Trypanosoma brucei]
Length = 499
Score = 25.4 bits (54), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 293 LPCRRKFYQTSKQGEEAAPKSQPKLRSQKERAEKIVK 329
L + Y ++K A + Q +L+S KE+AEK +K
Sbjct: 120 LTALERLYNSTKATAGQAAEKQKELQSLKEKAEKFLK 156
>M.Javanica_Scaff284g004387 on XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum]
Length = 3130
Score = 25.8 bits (55), Expect = 5.9, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 223 KIQKEDQTSKQGEEAAPKSQPKLRSQKERAEK 254
++QKE++ +Q +E K + R ++ER +K
Sbjct: 2768 QLQKEEELKRQEQERLQKEEALKRQEQERLQK 2799
Score = 25.8 bits (55), Expect = 5.9, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 223 KIQKEDQTSKQGEEAAPKSQPKLRSQKERAEK 254
++QKE++ +Q +E K + R ++ER +K
Sbjct: 2818 QLQKEEELKRQEQERLQKEEALKRQEQERLQK 2849
Score = 25.4 bits (54), Expect = 7.7, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 24/47 (51%)
Query: 223 KIQKEDQTSKQGEEAAPKSQPKLRSQKERAEKIVKKLGYTPKQISFK 269
++QKE+ +Q +E K + R ++ER E+ +L + I K
Sbjct: 2832 RLQKEEALKRQEQERLQKEEELKRQEQERLERKKIELAEREQHIKSK 2878
Score = 25.0 bits (53), Expect = 8.9, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 223 KIQKEDQTSKQGEEAAPKSQPKLRSQKERAEK 254
++QKE+ +Q +E K + R ++ER E+
Sbjct: 2782 RLQKEEALKRQEQERLQKEEELKRQEQERLER 2813
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2858g025655
(276 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_809719 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.3
XP_820147 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.6
XP_813641 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.6
XP_818092 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.4
XP_805336 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.6
XP_829781 VSG (Establishment) [Trypanosoma brucei] 26 2.9
XP_815479 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 7.1
>M.Javanica_Scaff2858g025655 on XP_809719 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 844
Score = 26.9 bits (58), Expect = 1.3, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 83 IEDESNIDTSEKILQITQDDKPLDWTAETENPFREPTP--PTATKQNEDFQPKR 134
+E+++ ID++ + LQ T+ P +T P + TP P ++ F+ +R
Sbjct: 718 VEEDTVIDSTSEGLQPTEAASPSVGEDKTATPLAKKTPEAPVVQSASQPFRKER 771
>M.Javanica_Scaff2858g025655 on XP_820147 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 878
Score = 26.9 bits (58), Expect = 1.6, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 84 EDESNIDTSEKILQITQDDKPLDWTAETE-NPFREPTPPTATKQNE 128
E+ +N + S + + ++P D T NP ++PTPP E
Sbjct: 691 ENAANKEVSVTVTNVLLYNRPWDEAEITALNPNKDPTPPVTPNAQE 736
>M.Javanica_Scaff2858g025655 on XP_813641 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 873
Score = 26.9 bits (58), Expect = 1.6, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 84 EDESNIDTSEKILQITQDDKPLDWTAETE-NPFREPTPPTATKQNE 128
E+ +N + S + + ++P D T NP ++PTPP E
Sbjct: 689 ENAANKEVSVTVTNVLLYNRPWDEAEITALNPNKDPTPPVTPNAQE 734
>M.Javanica_Scaff2858g025655 on XP_818092 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 884
Score = 26.2 bits (56), Expect = 2.4, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 41/103 (39%), Gaps = 27/103 (26%)
Query: 15 VIEDDPEPEQQQNTSSEAQTDQPALVVVEDSGDEVEEKQKKGVDVITPAFGLITIM---- 70
V +DD S+E TD+ L+ + EK+KKG + P+ G+++++
Sbjct: 418 VSDDDAAASSLLYKSAEGGTDKKELIA-------LYEKKKKGDE--KPSPGMVSVLLTAQ 468
Query: 71 --------------DDIIEDKMDEEQIEDESNIDTSEKILQIT 99
DD + +ED S D I++IT
Sbjct: 469 LQRVKEVLATWKKADDRVSKLCPSSDVEDASTGDACSPIVRIT 511
>M.Javanica_Scaff2858g025655 on XP_805336 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 931
Score = 26.2 bits (56), Expect = 2.6, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 87 SNIDTSEKILQITQDDKPLDWTAETE-NPFREPTPPTATKQNE 128
+N D S + + ++P D T NP ++PTPP E
Sbjct: 699 NNKDVSVTVTNVLLYNRPWDEAEITALNPNKDPTPPVTPNAQE 741
>M.Javanica_Scaff2858g025655 on XP_829781 VSG (Establishment) [Trypanosoma brucei]
Length = 514
Score = 25.8 bits (55), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 166 LHVLFHNLDARREIIEHLRQSVQLRTSHLKPT 197
+H+ FH AR + I++ Q +Q + H T
Sbjct: 373 MHLYFHYRSAREQAIQNRMQKLQEKAKHASDT 404
>M.Javanica_Scaff2858g025655 on XP_815479 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1047
Score = 24.6 bits (52), Expect = 7.1, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 31 EAQTDQPALVVVEDSGDEVEEKQKKGVDVITPA 63
E+ +++ A E +GD+ E++ K V ++ PA
Sbjct: 737 ESNSEESATSNEELTGDDTHEQRGKSVHILVPA 769
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff8274g051376
(178 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350935 PfEMP1 (Establishment) [Plasmodium falciparum] 25 3.1
XP_001608667 variant erythrocyte surface antigen-1, beta subuni... 25 3.3
>M.Javanica_Scaff8274g051376 on XP_001350935 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2268
Score = 25.0 bits (53), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
Query: 136 KTCEKLKECGKEQ-SPIDWTKGK 157
KTC+ + G E+ SP+D+TKGK
Sbjct: 456 KTCKDQPQVGNEKASPVDFTKGK 478
>M.Javanica_Scaff8274g051376 on XP_001608667 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1139
Score = 25.0 bits (53), Expect = 3.3, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
Query: 18 VLPLMLLLILLLGEDPISKQIGFVGKGVNALPPSEICDNCQKVIFYAF 65
+ PLM L +G K VG GV+ PP E NC K + F
Sbjct: 676 ISPLMCFLCDGIGSMACGKT---VGSGVDKYPPIEDHMNCPKGVLGHF 720
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7002g046343
(110 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_804422 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 7.4
>M.Javanica_Scaff7002g046343 on XP_804422 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 120
Score = 22.3 bits (46), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 37 LASPDCAGVISQLANRAAS 55
LASP CAGV R A+
Sbjct: 102 LASPPCAGVGGHTRGRVAA 120
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3518g029598
(135 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_805897 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.34
XP_808562 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.34
XP_965999 PfEMP1 (Establishment) [Plasmodium falciparum] 25 1.6
XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum] 25 2.2
>M.Javanica_Scaff3518g029598 on XP_805897 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 755
Score = 27.3 bits (59), Expect = 0.34, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 30/61 (49%)
Query: 50 STHKKVKKSKTKVSTKVKPEEQIRQTEIENKSDLKSSAGVGMLELKRVLSADMLTYMVKA 109
S H K+ ST KP E+I + ++ S L +SA L+ +RV + L +++
Sbjct: 223 SLHLKLVVGTATNSTGGKPSERISWDDPKSLSGLNTSAAFYKLKFERVFPSGGLGVLMEG 282
Query: 110 G 110
G
Sbjct: 283 G 283
>M.Javanica_Scaff3518g029598 on XP_808562 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 755
Score = 27.3 bits (59), Expect = 0.34, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 30/61 (49%)
Query: 50 STHKKVKKSKTKVSTKVKPEEQIRQTEIENKSDLKSSAGVGMLELKRVLSADMLTYMVKA 109
S H K+ ST KP E+I + ++ S L +SA L+ +RV + L +++
Sbjct: 223 SLHLKLVVGTATNSTGGKPSERISWDDPKSLSGLNTSAAFYKLKFERVFPSGGLGVLMEG 282
Query: 110 G 110
G
Sbjct: 283 G 283
>M.Javanica_Scaff3518g029598 on XP_965999 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1325
Score = 25.0 bits (53), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 3 NKISICFLLFTTIFVLITANGGNTKNETDNSEVKLESPRRKSLIPRISTHKKVK 56
+K+S C LF ++ N G E DN+ V L PRR++L + + K K
Sbjct: 500 DKVSSCTSLFFKNDLIEWNNSGVKNKENDNNGV-LVPPRRRNLCINLFSKKDYK 552
>M.Javanica_Scaff3518g029598 on XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum]
Length = 3130
Score = 24.6 bits (52), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
Query: 5 ISICFLLFTTIFVLI--TANGGNTKNE 29
+++C L+F++I +L+ T +G N NE
Sbjct: 3073 VALCVLIFSSIGLLLIKTNSGDNNSNE 3099
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff534g007319
(70 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2949g026246
(110 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_805196 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.084
XP_805195 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.084
XP_001349035 PfEMP1 (Establishment) [Plasmodium falciparum] 26 0.62
>M.Javanica_Scaff2949g026246 on XP_805196 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 731
Score = 28.5 bits (62), Expect = 0.084, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 15 LFNTQLIGKKVSVEVQIKNDWEEKREF---IYLKNVENNERFVLKTIEKSNNR 64
L + G+KV + Q N W+ +RE +YL +NN F + + NN+
Sbjct: 359 LITVTIEGRKVMLYTQRGNFWKGQREMFNALYLWVTDNNRSFHVGPVAMYNNK 411
>M.Javanica_Scaff2949g026246 on XP_805195 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 769
Score = 28.5 bits (62), Expect = 0.084, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 15 LFNTQLIGKKVSVEVQIKNDWEEKREF---IYLKNVENNERFVLKTIEKSNNR 64
L + G+KV + Q N W+ +RE +YL +NN F + + NN+
Sbjct: 397 LITVTIEGRKVMLYTQRGNFWKGQREMFNALYLWVTDNNRSFHVGPVAMYNNK 449
>M.Javanica_Scaff2949g026246 on XP_001349035 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2239
Score = 25.8 bits (55), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 19/92 (20%)
Query: 17 NTQLIGKKVSVEVQ-------------IKNDWEE-KREFIY--LKNVENNERFVLKTIEK 60
NT GK + Q N+W K++FI L+N +N E +L+
Sbjct: 1863 NTTASGKNTPSDTQNDIQSDGIPSSKITDNEWNTLKKDFISNMLQNTQNTEPNILRDNVD 1922
Query: 61 SNNRYCSSNYNMEGFLRPYELDQH-KNIFSVE 91
+N +S++N+E +P+ + H +N+FS E
Sbjct: 1923 NNTHPTTSHHNVE--EKPFIMSIHDRNLFSGE 1952
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6484g044159
(69 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_812811 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.9
XP_805783 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 3.7
XP_809010 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 3.8
XP_807444 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 3.9
XP_819342 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.4
XP_818091 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.6
XP_813257 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.3
XP_001349437 PfEMP1 (Establishment) [Plasmodium falciparum] 22 6.3
XP_001349033 PfEMP1 (Establishment) [Plasmodium falciparum] 21 8.6
XP_816853 Trans-sialidase (Invasion) [Trypanosoma cruzi] 21 8.7
XP_803104 Trans-sialidase (Invasion) [Trypanosoma cruzi] 21 10.0
>M.Javanica_Scaff6484g044159 on XP_812811 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 814
Score = 22.7 bits (47), Expect = 2.9, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 35 YFGSDDGNDTDTESDTDESDVDMNLIRVYRLISW 68
Y G D GN +T D D S N++ R +++
Sbjct: 704 YIGGDGGNAENTAGDEDVSVTVRNVLLYNRPLTF 737
>M.Javanica_Scaff6484g044159 on XP_805783 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 408
Score = 22.3 bits (46), Expect = 3.7, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 14/30 (46%)
Query: 35 YFGSDDGNDTDTESDTDESDVDMNLIRVYR 64
Y G D GN D ES D S N++ R
Sbjct: 296 YIGGDGGNADDKESRGDVSVTVKNVLLYNR 325
>M.Javanica_Scaff6484g044159 on XP_809010 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 774
Score = 22.3 bits (46), Expect = 3.8, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 35 YFGSDDGNDTDTESDTDESDVDMNLIRVYRLISW 68
Y G D GN +T D D S N++ R +++
Sbjct: 704 YIGGDGGNAENTAGDEDVSVTVSNVLLYNRPLTF 737
>M.Javanica_Scaff6484g044159 on XP_807444 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 777
Score = 22.3 bits (46), Expect = 3.9, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 35 YFGSDDGNDTDTESDTDESDVDMNLIRVYRLISW 68
Y G D GN +T D D S N++ R +++
Sbjct: 706 YIGGDGGNAENTAGDEDVSVTVSNVLLYNRPLTF 739
>M.Javanica_Scaff6484g044159 on XP_819342 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 825
Score = 21.9 bits (45), Expect = 4.4, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 16/37 (43%)
Query: 20 ITKNVYCDNDDECSSYFGSDDGNDTDTESDTDESDVD 56
I V DNDDE Y +TD E +S+ D
Sbjct: 602 IQVTVQKDNDDEWFVYANGRKIYETDEEEMAQDSNAD 638
>M.Javanica_Scaff6484g044159 on XP_818091 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 828
Score = 21.9 bits (45), Expect = 4.6, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 27 DNDDECSSYFGSDDGNDTDTESDTDESDVD 56
DNDDE Y +TD E +S+ D
Sbjct: 612 DNDDEWFVYANGRKIYETDEEEMAQDSNAD 641
>M.Javanica_Scaff6484g044159 on XP_813257 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 903
Score = 21.9 bits (45), Expect = 5.3, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 35 YFGSDDGNDTDTESDTDESDVDMNLIRVYRLIS 67
Y G D G D ES D S N++ R +S
Sbjct: 687 YIGGDGGGAEDKESREDVSVTVTNVLLYNRPLS 719
>M.Javanica_Scaff6484g044159 on XP_001349437 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2231
Score = 21.6 bits (44), Expect = 6.3, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 24 VYCDNDDECSSY-FGSDDGNDTDTESDTDESDVD 56
+Y + D + Y F SD + T +ES+ +E D++
Sbjct: 1834 IYMEGDSDEDKYAFMSDTTDITSSESEYEEMDIN 1867
>M.Javanica_Scaff6484g044159 on XP_001349033 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2064
Score = 21.2 bits (43), Expect = 8.6, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 15/36 (41%)
Query: 16 FLAFITKNVYCDNDDECSSYFGSDDGNDTDTESDTD 51
FL ++ C N E D ND DT S T+
Sbjct: 424 FLELLSNQKECKNHPEVKGKNSIDFKNDNDTFSRTE 459
>M.Javanica_Scaff6484g044159 on XP_816853 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1044
Score = 21.2 bits (43), Expect = 8.7, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 27 DNDDECSSYFGSDDGNDTDTESDTDESDVDMNLIRV 62
D+D SS D+ N+ + + +SD NL+ V
Sbjct: 413 DDDAAASSLLIKDNNNELISLYENKKSDGSYNLVAV 448
>M.Javanica_Scaff6484g044159 on XP_803104 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 255
Score = 20.8 bits (42), Expect = 10.0, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 5/50 (10%)
Query: 23 NVYCDNDDECSS-----YFGSDDGNDTDTESDTDESDVDMNLIRVYRLIS 67
N C+ D+ S Y G D G+ DT S + S N++ R ++
Sbjct: 30 NAQCEFDNADSKGISHFYIGGDGGSADDTRSQEELSVTVTNVLLYNRPLT 79
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff27279g093524
(110 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ABA06441 MSA-2a/b (Invasion) [Babesia bovis] 25 1.5
ABA06448 MSA-2a/b T-1 (Invasion) [Babesia bovis] 23 4.0
>M.Javanica_Scaff27279g093524 on ABA06441 MSA-2a/b (Invasion) [Babesia bovis]
Length = 278
Score = 24.6 bits (52), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 45 ELKNITRSINMLKSEENNIQIWKVHSQPGMPAE-IFSGPESERKLLDFFDDKKIVYSTLI 103
E+K I I L ++EN + + + MP+E + ++LDFF D K+ + T +
Sbjct: 36 EMKQIANYIKFLTNDENKESLEEKFKEVNMPSENSLDALSAFVQILDFFKD-KVPFKTPL 94
Query: 104 EDFGL 108
D G+
Sbjct: 95 FDNGV 99
>M.Javanica_Scaff27279g093524 on ABA06448 MSA-2a/b T-1 (Invasion) [Babesia bovis]
Length = 284
Score = 23.5 bits (49), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 45 ELKNITRSINMLKSEENNIQIWKVHSQPGMPAE-IFSGPESERKLLDFFDDKKIVYSTLI 103
E+K++ I L EEN + + MP+E + ++LDFF DK ++L
Sbjct: 36 EMKDVANYIKFLTKEENKDYLEGKFKEVDMPSENSLDALSAFVQILDFFKDKVPFKTSLF 95
Query: 104 ED 105
++
Sbjct: 96 DE 97
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff29244g096110
(232 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351221 CTRP (Adhesin) [Plasmodium falciparum] 38 3e-04
AAA29573 CSP (Invasion) [Plasmodium falciparum] 32 0.006
ABF66134 CSP (Invasion) [Plasmodium falciparum] 32 0.006
ABF66109 CSP (Invasion) [Plasmodium falciparum] 32 0.007
AAF03134 CSP (Invasion) [Plasmodium falciparum] 32 0.008
BAD73952 CSP (Invasion) [Plasmodium falciparum] 33 0.008
AAA29552 CSP (Invasion) [Plasmodium falciparum] 33 0.009
AAA29545 CSP (Invasion) [Plasmodium falciparum] 33 0.009
AAA29569 CSP (Invasion) [Plasmodium falciparum] 33 0.010
AAW78218 CSP (Invasion) [Plasmodium falciparum] 33 0.011
AAW78204 CSP (Invasion) [Plasmodium falciparum] 33 0.011
AAW78205 CSP (Invasion) [Plasmodium falciparum] 33 0.011
AAW78197 CSP (Invasion) [Plasmodium falciparum] 33 0.011
AAW78207 CSP (Invasion) [Plasmodium falciparum] 33 0.011
AAW78147 TRAP (Invasion) [Plasmodium falciparum] 33 0.012
ABB59593 CSP (Invasion) [Plasmodium falciparum] 31 0.014
AAW78186 CSP (Invasion) [Plasmodium falciparum] 33 0.014
AAN87576 CSP (Invasion) [Plasmodium falciparum] 33 0.014
AAN87575 CSP (Invasion) [Plasmodium falciparum] 33 0.014
AAW78135 TRAP (Invasion) [Plasmodium falciparum] 33 0.015
AAW78203 CSP (Invasion) [Plasmodium falciparum] 33 0.016
AAA29570 CSP (Invasion) [Plasmodium falciparum] 31 0.016
AAN87577 CSP (Invasion) [Plasmodium falciparum] 32 0.017
AAN87578 CSP (Invasion) [Plasmodium falciparum] 32 0.017
AAA29575 CSP (Invasion) [Plasmodium falciparum] 31 0.017
AAW78215 CSP (Invasion) [Plasmodium falciparum] 32 0.019
AAW78199 CSP (Invasion) [Plasmodium falciparum] 32 0.019
AAW78156 TRAP (Invasion) [Plasmodium falciparum] 32 0.019
AAQ11894 TRAP (Invasion) [Plasmodium falciparum] 32 0.019
AAA29770 TRAP (Invasion) [Plasmodium falciparum] 32 0.019
AAW78167 TRAP (Invasion) [Plasmodium falciparum] 32 0.019
AAW78130 TRAP (Invasion) [Plasmodium falciparum] 32 0.019
AAW78146 TRAP (Invasion) [Plasmodium falciparum] 32 0.019
AAW78182 CSP (Invasion) [Plasmodium falciparum] 32 0.020
AAA29777 TRAP (Invasion) [Plasmodium falciparum] 32 0.020
AAW78131 TRAP (Invasion) [Plasmodium falciparum] 32 0.020
AAQ11892 TRAP (Invasion) [Plasmodium falciparum] 32 0.020
AAA29776 TRAP (Invasion) [Plasmodium falciparum] 32 0.020
ABF66133 CSP (Invasion) [Plasmodium falciparum] 31 0.020
AAQ11895 TRAP (Invasion) [Plasmodium falciparum] 32 0.020
AAA29774 TRAP (Invasion) [Plasmodium falciparum] 32 0.020
AAA63153 CSP (Invasion) [Plasmodium falciparum] 32 0.020
AAW78210 CSP (Invasion) [Plasmodium falciparum] 32 0.020
AAW78165 TRAP (Invasion) [Plasmodium falciparum] 32 0.020
AAA29773 TRAP (Invasion) [Plasmodium falciparum] 32 0.021
AAQ11891 TRAP (Invasion) [Plasmodium falciparum] 32 0.021
AAA29771 TRAP (Invasion) [Plasmodium falciparum] 32 0.021
AAW78174 TRAP (Invasion) [Plasmodium falciparum] 32 0.021
ABB59608 CSP (Invasion) [Plasmodium falciparum] 30 0.021
BAD73951 CSP (Invasion) [Plasmodium falciparum] 32 0.021
ABF66132 CSP (Invasion) [Plasmodium falciparum] 31 0.021
AAW78160 TRAP (Invasion) [Plasmodium falciparum] 32 0.021
AAW78139 TRAP (Invasion) [Plasmodium falciparum] 32 0.021
AAA29775 TRAP (Invasion) [Plasmodium falciparum] 32 0.021
AAW78168 TRAP (Invasion) [Plasmodium falciparum] 32 0.021
AAW78213 CSP (Invasion) [Plasmodium falciparum] 32 0.021
AAW78154 TRAP (Invasion) [Plasmodium falciparum] 32 0.022
AAW78169 TRAP (Invasion) [Plasmodium falciparum] 32 0.022
AAW78171 TRAP (Invasion) [Plasmodium falciparum] 32 0.022
ABF66086 CSP (Invasion) [Plasmodium falciparum] 31 0.022
AAW78132 TRAP (Invasion) [Plasmodium falciparum] 32 0.022
AAW78159 TRAP (Invasion) [Plasmodium falciparum] 32 0.022
AAW78134 TRAP (Invasion) [Plasmodium falciparum] 32 0.022
AAA29778 TRAP (Invasion) [Plasmodium falciparum] 32 0.022
AAA29772 TRAP (Invasion) [Plasmodium falciparum] 32 0.022
AAW78158 TRAP (Invasion) [Plasmodium falciparum] 32 0.022
AAW78148 TRAP (Invasion) [Plasmodium falciparum] 32 0.022
AAW78164 TRAP (Invasion) [Plasmodium falciparum] 32 0.022
AAM19072 CSP (Invasion) [Plasmodium falciparum] 30 0.022
AAW78172 TRAP (Invasion) [Plasmodium falciparum] 32 0.022
AAW78173 TRAP (Invasion) [Plasmodium falciparum] 32 0.022
AAW78176 TRAP (Invasion) [Plasmodium falciparum] 32 0.023
AAW78161 TRAP (Invasion) [Plasmodium falciparum] 32 0.023
AAW78133 TRAP (Invasion) [Plasmodium falciparum] 32 0.023
AAW78177 TRAP (Invasion) [Plasmodium falciparum] 32 0.023
AAA29519 CSP (Invasion) [Plasmodium falciparum] 31 0.023
AAW78163 TRAP (Invasion) [Plasmodium falciparum] 32 0.023
AAW78136 TRAP (Invasion) [Plasmodium falciparum] 32 0.023
AAW78150 TRAP (Invasion) [Plasmodium falciparum] 32 0.023
AAW78153 TRAP (Invasion) [Plasmodium falciparum] 32 0.023
AAW78162 TRAP (Invasion) [Plasmodium falciparum] 32 0.023
AAW78141 TRAP (Invasion) [Plasmodium falciparum] 32 0.023
AAW78144 TRAP (Invasion) [Plasmodium falciparum] 32 0.024
AAW78149 TRAP (Invasion) [Plasmodium falciparum] 32 0.024
AAW78137 TRAP (Invasion) [Plasmodium falciparum] 32 0.024
AAW78175 TRAP (Invasion) [Plasmodium falciparum] 32 0.024
AAW78151 TRAP (Invasion) [Plasmodium falciparum] 32 0.024
AAW78157 TRAP (Invasion) [Plasmodium falciparum] 32 0.024
AAW78166 TRAP (Invasion) [Plasmodium falciparum] 32 0.024
AAW78138 TRAP (Invasion) [Plasmodium falciparum] 32 0.025
AAW78152 TRAP (Invasion) [Plasmodium falciparum] 32 0.025
ABF83996 CSP (Invasion) [Plasmodium falciparum] 32 0.025
ABF83987 CSP (Invasion) [Plasmodium falciparum] 32 0.025
AAA29576 CSP (Invasion) [Plasmodium falciparum] 32 0.025
ABF83992 CSP (Invasion) [Plasmodium falciparum] 32 0.026
ABF83993 CSP (Invasion) [Plasmodium falciparum] 32 0.026
AAN87595 CSP (Invasion) [Plasmodium falciparum] 32 0.026
AAN87593 CSP (Invasion) [Plasmodium falciparum] 32 0.026
AAN87594 CSP (Invasion) [Plasmodium falciparum] 32 0.026
AAF03135 CSP (Invasion) [Plasmodium falciparum] 30 0.027
>M.Javanica_Scaff29244g096110 on XP_001351221 CTRP (Adhesin) [Plasmodium falciparum]
Length = 2112
Score = 38.1 bits (87), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 12/60 (20%)
Query: 147 ESMEQQNCPINQIHYESPGIVPLEHFQCHWSEWSNWSACSSTCGTGVRIRMRVCSCSNLD 206
+S+E ++CPIN + G ++ WS CS+TCG G+R+R R S N D
Sbjct: 1578 KSIEYRSCPINAGCNDMCG------------DFGEWSECSATCGEGIRVRNRDNSLDNDD 1625
Score = 36.2 bits (82), Expect = 0.001, Method: Composition-based stats.
Identities = 47/198 (23%), Positives = 72/198 (36%), Gaps = 52/198 (26%)
Query: 24 DWSPWNAWSLCFEQNGIWAQTRTRTWLGDF-----NLNPGNNQQARACLPESVPHSSEVH 78
D W+ WS C + G ++RT T L ++ N + C +P S+ +
Sbjct: 1654 DIGEWSDWSSCSKTCGYSTRSRTFTILPEYIGEYPNCKIFERSETEVC--AFIPACSDEN 1711
Query: 79 QFNQATIIANADWGQWSEWTECNHFPSGNSAPFRTRWRVCDKSRC----DVAAVAHPIGA 134
F +W +W+EW S+P R RV K+R DV I +
Sbjct: 1712 CF---------EWEEWNEW----------SSPCSPRKRV-QKARVLKKDDVI-----ISS 1746
Query: 135 SSSSVECQLCPGESMEQQNCPINQIHYESPGIVPLE--HF--QCHWSE------------ 178
++ M +N + + I E H+ + + E
Sbjct: 1747 GDNNNNNNNNAKRGMGHKNSTFTSYNNKKSDICEEEVRHYLDKVEYDEESTCENKNPCGD 1806
Query: 179 WSNWSACSSTCGTGVRIR 196
WS+WS C TC GVRIR
Sbjct: 1807 WSDWSECDRTCNVGVRIR 1824
Score = 31.6 bits (70), Expect = 0.038, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Query: 177 SEWSNWSACSSTCGTG-VRIRMR 198
+EW W CSSTCG G +IR R
Sbjct: 1938 NEWEEWGDCSSTCGEGSFKIRKR 1960
>M.Javanica_Scaff29244g096110 on AAA29573 CSP (Invasion) [Plasmodium falciparum]
Length = 115
Score = 32.3 bits (72), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 162 ESPGIVPLEHF--QCHWSEWSNWSACSSTCGTGVRIRMRVCSCSNLDLNVRY--TFWRNI 217
E P +E + + +S + WS CS TCG G+++R++ S + Y + I
Sbjct: 27 EEPSDKHIEQYLKKIQYSLSTEWSPCSVTCGNGIQVRIKPGSADKPKDQLDYENDIEKKI 86
Query: 218 CIL 220
C +
Sbjct: 87 CKM 89
>M.Javanica_Scaff29244g096110 on ABF66134 CSP (Invasion) [Plasmodium falciparum]
Length = 106
Score = 32.3 bits (72), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 182 WSACSSTCGTGVRIRMRVCSCSNL--DLNVRYTFWRNICIL 220
WS CS TCG G+++R++ S + +LN + IC +
Sbjct: 56 WSPCSVTCGNGIQVRIKPGSANKPKDELNYENDIEKKICKM 96
>M.Javanica_Scaff29244g096110 on ABF66109 CSP (Invasion) [Plasmodium falciparum]
Length = 106
Score = 32.0 bits (71), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 182 WSACSSTCGTGVRIRMRVCSCSNL--DLNVRYTFWRNICIL 220
WS CS TCG G+++R++ S + +LN + IC +
Sbjct: 56 WSPCSVTCGNGIQVRIKPGSANKPKDELNYENDIEKKICKM 96
>M.Javanica_Scaff29244g096110 on AAF03134 CSP (Invasion) [Plasmodium falciparum]
Length = 106
Score = 32.0 bits (71), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
Query: 170 EHFQCHWSEWSN-----WSACSSTCGTGVRIRMRVCSCSNL--DLNVRYTFWRNICIL 220
+H + + E N WS CS TCG G+++R++ S +L+ + IC +
Sbjct: 39 KHIEKYLKEIQNSLSTEWSPCSVTCGNGIQVRIKPGSAGKPKNELDYENDIEKKICKM 96
>M.Javanica_Scaff29244g096110 on BAD73952 CSP (Invasion) [Plasmodium falciparum]
Length = 420
Score = 33.5 bits (75), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 162 ESPGIVPLEHF--QCHWSEWSNWSACSSTCGTGVRIRMRVCSCSNLDLNVRY--TFWRNI 217
E P +E + + +S + WS CS TCG G+++R++ S + Y + I
Sbjct: 332 EEPSDKHIEQYLKKIQYSLSTEWSPCSVTCGNGIQVRIKPGSADKPKDQLDYENDIEKKI 391
Query: 218 CIL 220
C +
Sbjct: 392 CKM 394
>M.Javanica_Scaff29244g096110 on AAA29552 CSP (Invasion) [Plasmodium falciparum]
Length = 420
Score = 33.5 bits (75), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 162 ESPGIVPLEHF--QCHWSEWSNWSACSSTCGTGVRIRMRVCSCSNLDLNVRY--TFWRNI 217
E P +E + + +S + WS CS TCG G+++R++ S + Y + I
Sbjct: 332 EEPSDKHIEQYLKKIQYSLSTEWSPCSVTCGNGIQVRIKPGSADKPKDQLDYENDIEKKI 391
Query: 218 CIL 220
C +
Sbjct: 392 CKM 394
>M.Javanica_Scaff29244g096110 on AAA29545 CSP (Invasion) [Plasmodium falciparum]
Length = 436
Score = 33.5 bits (75), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 162 ESPGIVPLEHF--QCHWSEWSNWSACSSTCGTGVRIRMRVCSCSNLDLNVRY--TFWRNI 217
E P +E + + +S + WS CS TCG G+++R++ S + Y + I
Sbjct: 348 EEPSDKHIEQYLKKIQYSLSTEWSPCSVTCGNGIQVRIKPGSADKPKDQLDYENDIEKKI 407
Query: 218 CIL 220
C +
Sbjct: 408 CKM 410
>M.Javanica_Scaff29244g096110 on AAA29569 CSP (Invasion) [Plasmodium falciparum]
Length = 452
Score = 33.1 bits (74), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 162 ESPGIVPLEHF--QCHWSEWSNWSACSSTCGTGVRIRMRVCSCSNLDLNVRY--TFWRNI 217
E P +E + + +S + WS CS TCG G+++R++ S + Y + I
Sbjct: 364 EEPSDKHIEQYLKKIQYSLSTEWSPCSVTCGNGIQVRIKPGSADKPKDQLDYENDIEKKI 423
Query: 218 CIL 220
C +
Sbjct: 424 CKM 426
>M.Javanica_Scaff29244g096110 on AAW78218 CSP (Invasion) [Plasmodium falciparum]
Length = 370
Score = 33.1 bits (74), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 182 WSACSSTCGTGVRIRMRVCSCSNL--DLNVRYTFWRNICIL 220
WS CS TCG G+++R++ S + +LN + IC +
Sbjct: 304 WSPCSVTCGNGIQVRIKPGSANKPKDELNYENDIEKKICKM 344
>M.Javanica_Scaff29244g096110 on AAW78204 CSP (Invasion) [Plasmodium falciparum]
Length = 374
Score = 33.1 bits (74), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 182 WSACSSTCGTGVRIRMRVCSCSNL--DLNVRYTFWRNICIL 220
WS CS TCG G+++R++ S + +LN + IC +
Sbjct: 308 WSPCSVTCGNGIQVRIKPGSANKPKDELNYENDIEKKICKM 348
>M.Javanica_Scaff29244g096110 on AAW78205 CSP (Invasion) [Plasmodium falciparum]
Length = 378
Score = 33.1 bits (74), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 182 WSACSSTCGTGVRIRMRVCSCSNL--DLNVRYTFWRNICIL 220
WS CS TCG G+++R++ S + +LN + IC +
Sbjct: 312 WSPCSVTCGNGIQVRIKPGSANKPKDELNYENDIEKKICKM 352
>M.Javanica_Scaff29244g096110 on AAW78197 CSP (Invasion) [Plasmodium falciparum]
Length = 374
Score = 33.1 bits (74), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 182 WSACSSTCGTGVRIRMRVCSCSNL--DLNVRYTFWRNICIL 220
WS CS TCG G+++R++ S + +LN + IC +
Sbjct: 308 WSPCSVTCGNGIQVRIKPGSANKPKDELNYENDIEKKICKM 348
>M.Javanica_Scaff29244g096110 on AAW78207 CSP (Invasion) [Plasmodium falciparum]
Length = 374
Score = 33.1 bits (74), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 182 WSACSSTCGTGVRIRMRVCSCSNL--DLNVRYTFWRNICIL 220
WS CS TCG G+++R++ S + +LN + IC +
Sbjct: 308 WSPCSVTCGNGIQVRIKPGSANKPKDELNYENDIEKKICKM 348
>M.Javanica_Scaff29244g096110 on AAW78147 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 33.1 bits (74), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 13/23 (56%)
Query: 179 WSNWSACSSTCGTGVRIRMRVCS 201
W WS CS TCG G R R R S
Sbjct: 247 WDEWSPCSVTCGKGTRSRKREIS 269
>M.Javanica_Scaff29244g096110 on ABB59593 CSP (Invasion) [Plasmodium falciparum]
Length = 77
Score = 30.8 bits (68), Expect = 0.014, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 162 ESPGIVPLEHF--QCHWSEWSNWSACSSTCGTGVRIRMR 198
E P +E + + +S + WS CS TCG G+++R++
Sbjct: 6 EEPSDKHIEQYLKKIQYSLSTEWSPCSVTCGNGIQVRIK 44
>M.Javanica_Scaff29244g096110 on AAW78186 CSP (Invasion) [Plasmodium falciparum]
Length = 397
Score = 32.7 bits (73), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
Query: 170 EHFQCHWSEWSN-----WSACSSTCGTGVRIRMRVCSCSNL--DLNVRYTFWRNICIL 220
+H + + E N WS CS TCG G+++R++ S +L+ + IC +
Sbjct: 314 KHIEKYLKEIQNSLSTEWSPCSVTCGNGIQVRIKPGSAGKPKNELDYENDIEKKICKM 371
>M.Javanica_Scaff29244g096110 on AAN87576 CSP (Invasion) [Plasmodium falciparum]
Length = 436
Score = 32.7 bits (73), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 162 ESPGIVPLEHF--QCHWSEWSNWSACSSTCGTGVRIRMRVCSCS--NLDLNVRYTFWRNI 217
E P +E + + S + WS CS TCG G+++R++ S + +LN + I
Sbjct: 348 EEPSDKHIEEYLKKIQNSLSTEWSPCSVTCGNGIQVRIKPGSANKPKDELNYENDIEKKI 407
Query: 218 CIL 220
C +
Sbjct: 408 CKM 410
>M.Javanica_Scaff29244g096110 on AAN87575 CSP (Invasion) [Plasmodium falciparum]
Length = 428
Score = 32.7 bits (73), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 162 ESPGIVPLEHF--QCHWSEWSNWSACSSTCGTGVRIRMRVCSCS--NLDLNVRYTFWRNI 217
E P +E + + S + WS CS TCG G+++R++ S + +LN + I
Sbjct: 340 EEPSDKHIEEYLKKIQNSLSTEWSPCSVTCGNGIQVRIKPGSANKPKDELNYENDIEKKI 399
Query: 218 CIL 220
C +
Sbjct: 400 CKM 402
>M.Javanica_Scaff29244g096110 on AAW78135 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 32.7 bits (73), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 13/23 (56%)
Query: 179 WSNWSACSSTCGTGVRIRMRVCS 201
W WS CS TCG G R R R S
Sbjct: 247 WDEWSPCSVTCGKGTRSRKREIS 269
>M.Javanica_Scaff29244g096110 on AAW78203 CSP (Invasion) [Plasmodium falciparum]
Length = 382
Score = 32.7 bits (73), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
Query: 170 EHFQCHWSEWSN-----WSACSSTCGTGVRIRMRVCSCSNL--DLNVRYTFWRNICIL 220
+H + + E N WS CS TCG G+++R++ S +L+ + IC +
Sbjct: 299 KHIKKYLKEIQNSLSTEWSPCSVTCGNGIQVRIKPGSADKPKNELDYENDIEKKICKM 356
>M.Javanica_Scaff29244g096110 on AAA29570 CSP (Invasion) [Plasmodium falciparum]
Length = 115
Score = 31.2 bits (69), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 180 SNWSACSSTCGTGVRIRMRVCSCSNL--DLNVRYTFWRNICIL 220
+ WS CS TCG G+++R++ S + +LN + IC +
Sbjct: 47 TEWSPCSVTCGNGIQVRIKPGSANKPKDELNYENDIEKKICKM 89
>M.Javanica_Scaff29244g096110 on AAN87577 CSP (Invasion) [Plasmodium falciparum]
Length = 389
Score = 32.3 bits (72), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
Query: 170 EHFQCHWSEWSN-----WSACSSTCGTGVRIRMRVCSCSNL--DLNVRYTFWRNICIL 220
+H + + E N WS CS TCG G+++R++ S +L+ + IC +
Sbjct: 306 KHIEKYLKEIQNSLSTEWSPCSVTCGNGIQVRIKPGSAGKPKNELDYENDIEKKICKM 363
>M.Javanica_Scaff29244g096110 on AAN87578 CSP (Invasion) [Plasmodium falciparum]
Length = 393
Score = 32.3 bits (72), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
Query: 170 EHFQCHWSEWSN-----WSACSSTCGTGVRIRMRVCSCSNL--DLNVRYTFWRNICIL 220
+H + + E N WS CS TCG G+++R++ S +L+ + IC +
Sbjct: 310 KHIEKYLKEIQNSLSTEWSPCSVTCGNGIQVRIKPGSAGKPKNELDYENDIEKKICKM 367
>M.Javanica_Scaff29244g096110 on AAA29575 CSP (Invasion) [Plasmodium falciparum]
Length = 115
Score = 31.2 bits (69), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 18/26 (69%)
Query: 173 QCHWSEWSNWSACSSTCGTGVRIRMR 198
+ +S + WS CS TCG G+++R++
Sbjct: 40 KIQYSLSTEWSPCSVTCGNGIQVRIK 65
>M.Javanica_Scaff29244g096110 on AAW78215 CSP (Invasion) [Plasmodium falciparum]
Length = 370
Score = 32.3 bits (72), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 182 WSACSSTCGTGVRIRMRVCSC--SNLDLNVRYTFWRNICIL 220
WS CS TCG G+++R++ S S +L+ + IC +
Sbjct: 304 WSPCSVTCGNGIQVRIKPGSAGKSKNELDYENDIEKKICKM 344
>M.Javanica_Scaff29244g096110 on AAW78199 CSP (Invasion) [Plasmodium falciparum]
Length = 386
Score = 32.3 bits (72), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 182 WSACSSTCGTGVRIRMRVCSC--SNLDLNVRYTFWRNICIL 220
WS CS TCG G+++R++ S S +L+ + IC +
Sbjct: 320 WSPCSVTCGNGIQVRIKPGSAGKSKNELDYENDIEKKICKM 360
>M.Javanica_Scaff29244g096110 on AAW78156 TRAP (Invasion) [Plasmodium falciparum]
Length = 581
Score = 32.3 bits (72), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 12/20 (60%)
Query: 179 WSNWSACSSTCGTGVRIRMR 198
W WS CS TCG G R R R
Sbjct: 247 WDEWSPCSVTCGKGTRSRKR 266
>M.Javanica_Scaff29244g096110 on AAQ11894 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 32.3 bits (72), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 12/20 (60%)
Query: 179 WSNWSACSSTCGTGVRIRMR 198
W WS CS TCG G R R R
Sbjct: 247 WDEWSPCSVTCGKGTRSRKR 266
>M.Javanica_Scaff29244g096110 on AAA29770 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 32.3 bits (72), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 12/20 (60%)
Query: 179 WSNWSACSSTCGTGVRIRMR 198
W WS CS TCG G R R R
Sbjct: 247 WDEWSPCSVTCGKGTRSRKR 266
>M.Javanica_Scaff29244g096110 on AAW78167 TRAP (Invasion) [Plasmodium falciparum]
Length = 575
Score = 32.3 bits (72), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 12/20 (60%)
Query: 179 WSNWSACSSTCGTGVRIRMR 198
W WS CS TCG G R R R
Sbjct: 247 WDEWSPCSVTCGKGTRSRKR 266
>M.Javanica_Scaff29244g096110 on AAW78130 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 32.3 bits (72), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 12/20 (60%)
Query: 179 WSNWSACSSTCGTGVRIRMR 198
W WS CS TCG G R R R
Sbjct: 247 WDEWSPCSVTCGKGTRSRKR 266
>M.Javanica_Scaff29244g096110 on AAW78146 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 32.3 bits (72), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 12/20 (60%)
Query: 179 WSNWSACSSTCGTGVRIRMR 198
W WS CS TCG G R R R
Sbjct: 247 WDEWSPCSVTCGKGTRSRKR 266
>M.Javanica_Scaff29244g096110 on AAW78182 CSP (Invasion) [Plasmodium falciparum]
Length = 397
Score = 32.3 bits (72), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 182 WSACSSTCGTGVRIRMRVCSC--SNLDLNVRYTFWRNICIL 220
WS CS TCG G+++R++ S S +L+ + IC +
Sbjct: 331 WSPCSVTCGNGIQVRIKPGSAGKSKNELDYENDIEKKICKM 371
>M.Javanica_Scaff29244g096110 on AAA29777 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 32.3 bits (72), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 12/20 (60%)
Query: 179 WSNWSACSSTCGTGVRIRMR 198
W WS CS TCG G R R R
Sbjct: 247 WDEWSPCSVTCGKGTRSRKR 266
>M.Javanica_Scaff29244g096110 on AAW78131 TRAP (Invasion) [Plasmodium falciparum]
Length = 557
Score = 32.3 bits (72), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 12/20 (60%)
Query: 179 WSNWSACSSTCGTGVRIRMR 198
W WS CS TCG G R R R
Sbjct: 247 WDEWSPCSVTCGKGTRSRKR 266
>M.Javanica_Scaff29244g096110 on AAQ11892 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 32.3 bits (72), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 12/20 (60%)
Query: 179 WSNWSACSSTCGTGVRIRMR 198
W WS CS TCG G R R R
Sbjct: 247 WDEWSPCSVTCGKGTRSRKR 266
>M.Javanica_Scaff29244g096110 on AAA29776 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 32.3 bits (72), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 12/20 (60%)
Query: 179 WSNWSACSSTCGTGVRIRMR 198
W WS CS TCG G R R R
Sbjct: 247 WDEWSPCSVTCGKGTRSRKR 266
>M.Javanica_Scaff29244g096110 on ABF66133 CSP (Invasion) [Plasmodium falciparum]
Length = 106
Score = 30.8 bits (68), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 182 WSACSSTCGTGVRIRMRVCSCSNL--DLNVRYTFWRNICIL 220
WS CS TCG G+++R++ S + +L+ + IC +
Sbjct: 56 WSPCSVTCGNGIQVRIKPGSANKPKDELDYENDIEKKICKM 96
>M.Javanica_Scaff29244g096110 on AAQ11895 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 32.3 bits (72), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 12/20 (60%)
Query: 179 WSNWSACSSTCGTGVRIRMR 198
W WS CS TCG G R R R
Sbjct: 247 WDEWSPCSVTCGKGTRSRKR 266
>M.Javanica_Scaff29244g096110 on AAA29774 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 32.3 bits (72), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 12/20 (60%)
Query: 179 WSNWSACSSTCGTGVRIRMR 198
W WS CS TCG G R R R
Sbjct: 247 WDEWSPCSVTCGKGTRSRKR 266
>M.Javanica_Scaff29244g096110 on AAA63153 CSP (Invasion) [Plasmodium falciparum]
Length = 408
Score = 32.3 bits (72), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 182 WSACSSTCGTGVRIRMRVCSC--SNLDLNVRYTFWRNICIL 220
WS CS TCG G+++R++ S S +L+ + IC +
Sbjct: 342 WSPCSVTCGNGIQVRIKPGSAGKSKDELDYENDIEKKICKM 382
>M.Javanica_Scaff29244g096110 on AAW78210 CSP (Invasion) [Plasmodium falciparum]
Length = 378
Score = 32.3 bits (72), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 182 WSACSSTCGTGVRIRMRVCSC--SNLDLNVRYTFWRNICIL 220
WS CS TCG G+++R++ S S +L+ + IC +
Sbjct: 312 WSPCSVTCGNGIQVRIKPGSAGKSKNELDYENDIEKKICKM 352
>M.Javanica_Scaff29244g096110 on AAW78165 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 32.3 bits (72), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 12/20 (60%)
Query: 179 WSNWSACSSTCGTGVRIRMR 198
W WS CS TCG G R R R
Sbjct: 247 WDEWSPCSVTCGKGTRSRKR 266
>M.Javanica_Scaff29244g096110 on AAA29773 TRAP (Invasion) [Plasmodium falciparum]
Length = 568
Score = 32.3 bits (72), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 12/20 (60%)
Query: 179 WSNWSACSSTCGTGVRIRMR 198
W WS CS TCG G R R R
Sbjct: 247 WDEWSPCSVTCGKGTRSRKR 266
>M.Javanica_Scaff29244g096110 on AAQ11891 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 32.3 bits (72), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 12/20 (60%)
Query: 179 WSNWSACSSTCGTGVRIRMR 198
W WS CS TCG G R R R
Sbjct: 247 WDEWSPCSVTCGKGTRSRKR 266
>M.Javanica_Scaff29244g096110 on AAA29771 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 32.3 bits (72), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 12/20 (60%)
Query: 179 WSNWSACSSTCGTGVRIRMR 198
W WS CS TCG G R R R
Sbjct: 247 WDEWSPCSVTCGKGTRSRKR 266
>M.Javanica_Scaff29244g096110 on AAW78174 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 32.3 bits (72), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 12/20 (60%)
Query: 179 WSNWSACSSTCGTGVRIRMR 198
W WS CS TCG G R R R
Sbjct: 247 WDEWSPCSVTCGKGTRSRKR 266
>M.Javanica_Scaff29244g096110 on ABB59608 CSP (Invasion) [Plasmodium falciparum]
Length = 77
Score = 30.0 bits (66), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 182 WSACSSTCGTGVRIRMRVCSCS--NLDLNVRYTFWRNICIL 220
WS CS TCG G+++R++ S + +L+ + IC +
Sbjct: 28 WSPCSVTCGNGIQVRIKPGSANKPKDELDYENDIEKKICKM 68
>M.Javanica_Scaff29244g096110 on BAD73951 CSP (Invasion) [Plasmodium falciparum]
Length = 408
Score = 32.3 bits (72), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 182 WSACSSTCGTGVRIRMRVCSC--SNLDLNVRYTFWRNICIL 220
WS CS TCG G+++R++ S S +L+ + IC +
Sbjct: 342 WSPCSVTCGNGIQVRIKPGSAGKSKDELDYENDIEKKICKM 382
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5287g038748
(201 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_818662 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.6
XP_806299 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 5.4
>M.Javanica_Scaff5287g038748 on XP_818662 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1038
Score = 25.0 bits (53), Expect = 3.6, Method: Composition-based stats.
Identities = 36/181 (19%), Positives = 58/181 (32%), Gaps = 33/181 (18%)
Query: 23 DNCLYKCRDGKENLVDGRSDFKVKYPVKIKRLRGTLYRPNKEPACNENRATVLMPGIVKL 82
D+ LY CR VD R K+ CN T G+V
Sbjct: 462 DSALYSCRSASSGTVDAR----------------------KKGICN---GTFPTKGVVGF 496
Query: 83 LDGEMSVPK-----NNFDLIKSGTVRMTVNSPNFDKPICLNGTSQYLAMPNSWCSFNLCE 137
L G SV + + I G + PN + G+S P +
Sbjct: 497 LSGNFSVTEWRDEYLGVNAIVHGPAEKRIGVPN---GVTFKGSSAGAVWPVGDMGQTVPY 553
Query: 138 FIGNDLCKLLQTPGIHTIRELEKGEFSFSMFLETEGKTILELQIPTNQKYLQIGLDNTYS 197
+ N+ L+ T IH + + + +T+ + L +K+L I + S
Sbjct: 554 YFANNKFTLVATVSIHEVPKEDSRPLMGVRMNDTDSTVLFGLSYTHEKKWLAIAGNRATS 613
Query: 198 E 198
+
Sbjct: 614 K 614
>M.Javanica_Scaff5287g038748 on XP_806299 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1047
Score = 24.6 bits (52), Expect = 5.4, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 14/36 (38%)
Query: 23 DNCLYKCRDGKENLVDGRSDFKVKYPVKIKRLRGTL 58
D L CR G VD R PV K L G L
Sbjct: 462 DRALKTCRSGSGGTVDARKKDMCNGPVPTKGLVGFL 497
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6605g044675
(61 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609666 variant erythrocyte surface antigen-1, alpha subun... 23 1.6
XP_001609618 variant erythrocyte surface antigen-1, alpha subun... 23 1.6
>M.Javanica_Scaff6605g044675 on XP_001609666 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1269
Score = 23.1 bits (48), Expect = 1.6, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 34 TSSSQAKIFSIYGKEANCMNYPIMSINS 61
T+S+ I S+Y A YP +SI +
Sbjct: 497 TNSTTPAIHSLYANTACNFTYPTVSIQA 524
>M.Javanica_Scaff6605g044675 on XP_001609618 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1325
Score = 23.1 bits (48), Expect = 1.6, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 34 TSSSQAKIFSIYGKEANCMNYPIMSINS 61
T+S+ I S+Y A YP +SI +
Sbjct: 562 TNSTTPAIHSLYANTACNFTYPTVSIQA 589
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3464g029299
(167 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAW78156 TRAP (Invasion) [Plasmodium falciparum] 34 0.002
AAW78167 TRAP (Invasion) [Plasmodium falciparum] 34 0.003
AAW78131 TRAP (Invasion) [Plasmodium falciparum] 31 0.024
AAW78160 TRAP (Invasion) [Plasmodium falciparum] 31 0.024
AAW78171 TRAP (Invasion) [Plasmodium falciparum] 28 0.26
AAW78134 TRAP (Invasion) [Plasmodium falciparum] 28 0.30
AAW78169 TRAP (Invasion) [Plasmodium falciparum] 28 0.33
XP_001609565 variant erythrocyte surface antigen-1, alpha subun... 26 1.3
XP_001349032 PfEMP1 (Establishment) [Plasmodium falciparum] 25 2.2
XP_001609540 variant erythrocyte surface antigen-1, alpha subun... 25 2.2
XP_001349030 PfEMP1 (Establishment) [Plasmodium falciparum] 25 2.4
XP_001610721 variant erythrocyte surface antigen-1, alpha subun... 25 4.3
XP_001609315 variant erythrocyte surface antigen-1, alpha subun... 24 4.3
XP_817001 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 6.6
>M.Javanica_Scaff3464g029299 on AAW78156 TRAP (Invasion) [Plasmodium falciparum]
Length = 581
Score = 34.3 bits (77), Expect = 0.002, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Query: 14 PTGPSLPSSPSPPGDPCIPAEPCGPGGPCFPEYTKDVPPTVPCAPCSPGGP 64
P PS P +PS P +P P P P P PE + P P P +P P
Sbjct: 349 PENPSNPENPSNPENPSNPENPSNPENPSNPENPSN--PENPSNPENPSNP 397
Score = 33.9 bits (76), Expect = 0.003, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 9 SAPCLPTGPSLPSSPSPPGDPCIPAEPCGPGGPCFPEYTKDVP 51
S P P+ P PS+P P +P P+ P P P PE ++P
Sbjct: 365 SNPENPSNPENPSNPENPSNPENPSNPENPSNPDIPEQKPNIP 407
Score = 33.9 bits (76), Expect = 0.004, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Query: 11 PCLPTGPSLPSSPSPPGDPCIPAEPCGPGGPCFPEYTKDVPPTVPCAPCSPGGPK 65
P P PS P +PS P +P P P P P PE P+ P P +P P+
Sbjct: 352 PSNPENPSNPENPSNPENPSNPENPSNPENPSNPE-----NPSNPENPSNPDIPE 401
Score = 32.0 bits (71), Expect = 0.014, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
Query: 11 PCLPTGPSLPSSPSPPGDPCIPAEPCGPGGPCFPEYTKDVPPTVPCAP 58
P P PS P +PS P +P P P P P P D+P P P
Sbjct: 364 PSNPENPSNPENPSNPENPSNPENPSNPENPSNP----DIPEQKPNIP 407
>M.Javanica_Scaff3464g029299 on AAW78167 TRAP (Invasion) [Plasmodium falciparum]
Length = 575
Score = 34.3 bits (77), Expect = 0.003, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 9 SAPCLPTGPSLPSSPSPPGDPCIPAEPCGPGGPCFPEYTKDVP 51
S P P+ P PS+P P +P P+ P P P PE ++P
Sbjct: 359 SNPENPSNPENPSNPENPSNPENPSNPENPSNPDIPEQKPNIP 401
Score = 33.9 bits (76), Expect = 0.003, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Query: 11 PCLPTGPSLPSSPSPPGDPCIPAEPCGPGGPCFPE--YTKDVPPTVPCAP 58
P P PS P +PS P +P P P P P PE D+P P P
Sbjct: 352 PSNPENPSNPENPSNPENPSNPENPSNPENPSNPENPSNPDIPEQKPNIP 401
Score = 33.1 bits (74), Expect = 0.006, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
Query: 14 PTGPSLPSSPSPPGDPCIPAEPCGPGGPCFPEYTKDVPPTVPCAPCSPGGPK 65
P PS P +PS P +P P P P P PE P+ P P +P P+
Sbjct: 349 PENPSNPENPSNPENPSNPENPSNPENPSNPE-----NPSNPENPSNPDIPE 395
>M.Javanica_Scaff3464g029299 on AAW78131 TRAP (Invasion) [Plasmodium falciparum]
Length = 557
Score = 31.2 bits (69), Expect = 0.024, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 13 LPTGPSLPSSPSPPGDPCIPAEPCGPGGPCFPEYTKDVP 51
L P PS+P P +P P+ P P P PE ++P
Sbjct: 345 LDENPENPSNPENPSNPENPSNPENPSNPDIPEQEPNIP 383
Score = 28.9 bits (63), Expect = 0.14, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 11 PCLPTGPSLPSSPSPPGDPCIPAEPCGPGGPCFPEYT-KDVPPTVPCAP 58
P P PS P +PS P +P P P P PE + K+VP VP P
Sbjct: 352 PSNPENPSNPENPSNPENPSNPDIP--EQEPNIPEDSEKEVPSDVPKNP 398
>M.Javanica_Scaff3464g029299 on AAW78160 TRAP (Invasion) [Plasmodium falciparum]
Length = 557
Score = 31.2 bits (69), Expect = 0.024, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 13 LPTGPSLPSSPSPPGDPCIPAEPCGPGGPCFPEYTKDVP 51
L P PS+P P +P P+ P P P PE ++P
Sbjct: 345 LDENPENPSNPENPSNPENPSNPENPSNPDIPEQEPNIP 383
Score = 28.9 bits (63), Expect = 0.14, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 11 PCLPTGPSLPSSPSPPGDPCIPAEPCGPGGPCFPEYT-KDVPPTVPCAP 58
P P PS P +PS P +P P P P PE + K+VP VP P
Sbjct: 352 PSNPENPSNPENPSNPENPSNPDIP--EQEPNIPEDSEKEVPSDVPKNP 398
>M.Javanica_Scaff3464g029299 on AAW78171 TRAP (Invasion) [Plasmodium falciparum]
Length = 551
Score = 28.1 bits (61), Expect = 0.26, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 14 PTGPSLPSSPSPPGDPCIPAEPCGPGGPCFPEYT-KDVPPTVPCAP 58
P PS P +PS P +P P P P PE + K+VP VP P
Sbjct: 349 PENPSNPENPSNPENPSNPDIP--EQEPNIPEDSEKEVPSDVPKNP 392
Score = 26.9 bits (58), Expect = 0.60, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 16 GPSLPSSPSPPGDPCIPAEPCGPGGPCFPEYTKDVP 51
G L +P P +P P+ P P P PE ++P
Sbjct: 342 GFDLDENPENPSNPENPSNPENPSNPDIPEQEPNIP 377
>M.Javanica_Scaff3464g029299 on AAW78134 TRAP (Invasion) [Plasmodium falciparum]
Length = 551
Score = 27.7 bits (60), Expect = 0.30, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 14 PTGPSLPSSPSPPGDPCIPAEPCGPGGPCFPEYT-KDVPPTVPCAP 58
P PS P +PS P +P P P P PE + K+VP VP P
Sbjct: 349 PENPSNPENPSNPENPSNPDIP--EQEPNIPEDSEKEVPSDVPKNP 392
Score = 26.9 bits (58), Expect = 0.66, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 16 GPSLPSSPSPPGDPCIPAEPCGPGGPCFPEYTKDVP 51
G L +P P +P P+ P P P PE ++P
Sbjct: 342 GFDLDENPENPSNPENPSNPENPSNPDIPEQEPNIP 377
>M.Javanica_Scaff3464g029299 on AAW78169 TRAP (Invasion) [Plasmodium falciparum]
Length = 551
Score = 27.7 bits (60), Expect = 0.33, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 14 PTGPSLPSSPSPPGDPCIPAEPCGPGGPCFPEYT-KDVPPTVPCAP 58
P PS P +PS P +P P P P PE + K+VP VP P
Sbjct: 349 PENPSNPENPSNPENPSNPDIP--EQEPNIPEDSEKEVPSDVPKNP 392
Score = 26.6 bits (57), Expect = 0.71, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 16 GPSLPSSPSPPGDPCIPAEPCGPGGPCFPEYTKDVP 51
G L +P P +P P+ P P P PE ++P
Sbjct: 342 GFDLDENPENPSNPENPSNPENPSNPDIPEQEPNIP 377
>M.Javanica_Scaff3464g029299 on XP_001609565 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1341
Score = 26.2 bits (56), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 12/23 (52%), Gaps = 2/23 (8%)
Query: 37 GPGGPCFPEYTKDVPPTVPCAPC 59
G G C +Y KDV P PC C
Sbjct: 147 GKDGEC--QYLKDVTPNTPCTEC 167
>M.Javanica_Scaff3464g029299 on XP_001349032 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2267
Score = 25.4 bits (54), Expect = 2.2, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 19 LPSSPSPPGDPCIPAEPCGP 38
LPS+P PP D +P P
Sbjct: 1725 LPSAPEPPQDKALPKPAAQP 1744
>M.Javanica_Scaff3464g029299 on XP_001609540 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1349
Score = 25.4 bits (54), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 12/23 (52%), Gaps = 2/23 (8%)
Query: 37 GPGGPCFPEYTKDVPPTVPCAPC 59
G G C EY +DV P PC C
Sbjct: 143 GQNGTC--EYLEDVKPNKPCEQC 163
>M.Javanica_Scaff3464g029299 on XP_001349030 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 25.4 bits (54), Expect = 2.4, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 32/81 (39%), Gaps = 25/81 (30%)
Query: 19 LPSSPSPPGDPCIPAEPCGPGGPCFPEYT-----------------KDVPPTVPCAPCSP 61
+P+ P PG+ C PA GG PE T KD P P P P
Sbjct: 1663 VPTEPEEPGETCTPA---AAGGGHNPEQTPVLKPEEEAPTPEAETKKDKAPVKP--PSQP 1717
Query: 62 GGPKYLNSRNP--VASRNSWA 80
P+ ++ + P V S +W+
Sbjct: 1718 TTPQIVD-KTPALVTSTLAWS 1737
>M.Javanica_Scaff3464g029299 on XP_001610721 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1331
Score = 24.6 bits (52), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 11/24 (45%), Gaps = 2/24 (8%)
Query: 37 GPGGPCFPEYTKDVPPTVPCAPCS 60
G G C EY KDV PC C
Sbjct: 143 GKDGSC--EYLKDVQKNDPCKDCE 164
>M.Javanica_Scaff3464g029299 on XP_001609315 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1338
Score = 24.3 bits (51), Expect = 4.3, Method: Composition-based stats.
Identities = 9/15 (60%), Positives = 9/15 (60%)
Query: 45 EYTKDVPPTVPCAPC 59
EY KDV P PC C
Sbjct: 158 EYLKDVTPNDPCKDC 172
>M.Javanica_Scaff3464g029299 on XP_817001 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 928
Score = 23.9 bits (50), Expect = 6.6, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 17/43 (39%)
Query: 7 SASAPCLPTGPSLPSSPSPPGDPCIPAEPCGPGGPCFPEYTKD 49
S S P T L S SP G+ + P G P E + D
Sbjct: 775 STSIPVGQTVQQLASETSPDGNADVDVSPSSSGNPTVGEGSAD 817
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4222g033483
(237 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3175g027621
(281 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Q36736 KMP-11 (Others) [Leishmania donovani] 29 0.10
XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum] 25 7.5
XP_001351561 PfEMP1 (Establishment) [Plasmodium falciparum] 25 8.7
XP_001348946 PfEMP1 (Establishment) [Plasmodium falciparum] 25 8.7
>M.Javanica_Scaff3175g027621 on Q36736 KMP-11 (Others) [Leishmania donovani]
Length = 92
Score = 28.9 bits (63), Expect = 0.10, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 23 DEYRLLQDLKERYDPIERPVQNHTEAVKVSLH 54
DE L +++E Y+ ER ++ HTE +H
Sbjct: 36 DESTLSPEMREHYEKFERMIKEHTEKFNKKMH 67
>M.Javanica_Scaff3175g027621 on XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2980
Score = 24.6 bits (52), Expect = 7.5, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 24/41 (58%)
Query: 36 DPIERPVQNHTEAVKVSLHLYLQQIVDVDEKNQVLTVVLWE 76
D +E+ +QN E K LYLQ+ + ++ + ++ ++L E
Sbjct: 2323 DCVEKWIQNKREEWKKIKELYLQEYKNNNQPDYLVKIILEE 2363
>M.Javanica_Scaff3175g027621 on XP_001351561 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3553
Score = 24.6 bits (52), Expect = 8.7, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 18 VNCSDDEYRLLQDLKERYDPIERPVQNHTEAVKVSLHLYLQQIVDVDEK 66
+N + Y+L++DLKE+ D ++N T+ + ++ + + D+ E+
Sbjct: 672 LNKEEKWYKLMEDLKEKID--SSNLKNGTKDSEGAIKVLFDHLKDIAER 718
>M.Javanica_Scaff3175g027621 on XP_001348946 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3553
Score = 24.6 bits (52), Expect = 8.7, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 18 VNCSDDEYRLLQDLKERYDPIERPVQNHTEAVKVSLHLYLQQIVDVDEK 66
+N + Y+L++DLKE+ D ++N T+ + ++ + + D+ E+
Sbjct: 672 LNKEEKWYKLMEDLKEKID--SSNLKNGTKDSEGAIKVLFDHLKDIAER 718
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff31047g098232
(99 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_804506 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.32
XP_804812 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.8
XP_804487 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.2
XP_845136 VSG (Establishment) [Trypanosoma brucei] 23 5.4
>M.Javanica_Scaff31047g098232 on XP_804506 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1012
Score = 26.2 bits (56), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/93 (21%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Query: 6 LNVFLLVTLILLLDKHQNEKHSFGVLADPEPYRSAAVIAAEARARARAIEAENRARRARL 65
++F+ T +LL N + + A P + VIAA A R + E+ N +
Sbjct: 343 FDLFVPQTTVLLPRGGVNSEKKWNSFASPSLVSAGGVIAAFAEGRPSSKESNNASSEP-- 400
Query: 66 EAEARARRLEAEARARRIEAEARANAAAARQFI 98
++A A +++ + AE + + A +
Sbjct: 401 SSDAVAWYIDSAWDWSTLVAEVKKSTWQAHTVL 433
>M.Javanica_Scaff31047g098232 on XP_804812 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 506
Score = 24.3 bits (51), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 24/56 (42%)
Query: 3 PLTLNVFLLVTLILLLDKHQNEKHSFGVLADPEPYRSAAVIAAEARARARAIEAEN 58
P ++F+ T +LL N + + A P + VIAA A + E+ N
Sbjct: 80 PRRFDLFVPQTTVLLPRGGVNSEKKWNSFASPSLVSAGGVIAAFAEGHPSSKESNN 135
>M.Javanica_Scaff31047g098232 on XP_804487 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 752
Score = 23.5 bits (49), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/96 (20%), Positives = 39/96 (40%), Gaps = 2/96 (2%)
Query: 3 PLTLNVFLLVTLILLLDKHQNEKHSFGVLADPEPYRSAAVIAAEARARARAIEAENRARR 62
P ++F+ T +LL N + + A P + VIAA A + +N++
Sbjct: 79 PQRFDLFVPQTTVLLPRGEGNSEKRWDSFASPSLVSAGGVIAAFAEGHLSSKNEDNKSTE 138
Query: 63 ARLEAEARARRLEAEARARRIEAEARANAAAARQFI 98
++A A ++A + AE + + A +
Sbjct: 139 PF--SDAVAWYIDAAWDWSTLAAEVKKSTWQAHTVL 172
>M.Javanica_Scaff31047g098232 on XP_845136 VSG (Establishment) [Trypanosoma brucei]
Length = 481
Score = 22.7 bits (47), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 10/40 (25%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 52 RAIEAENRARRARLEAEARARRLEAEARAR---RIEAEAR 88
R ++A+N++ A+ AEA+ +++ + + + AEA+
Sbjct: 391 RQLQAQNKSETAKEAAEAKCNKIDKDTECKTPCKWNAEAQ 430
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3867g031622
(116 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAW78157 TRAP (Invasion) [Plasmodium falciparum] 25 2.0
XP_807173 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.4
XP_804448 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.4
AAW78158 TRAP (Invasion) [Plasmodium falciparum] 23 6.9
AAW78163 TRAP (Invasion) [Plasmodium falciparum] 23 6.9
AAW78141 TRAP (Invasion) [Plasmodium falciparum] 23 7.0
AAW78150 TRAP (Invasion) [Plasmodium falciparum] 23 7.0
AAW78144 TRAP (Invasion) [Plasmodium falciparum] 23 7.0
AAW78159 TRAP (Invasion) [Plasmodium falciparum] 23 7.3
AAW78168 TRAP (Invasion) [Plasmodium falciparum] 23 7.3
AAW78174 TRAP (Invasion) [Plasmodium falciparum] 23 7.3
AAW78164 TRAP (Invasion) [Plasmodium falciparum] 23 7.4
AAW78165 TRAP (Invasion) [Plasmodium falciparum] 23 7.4
AAW78149 TRAP (Invasion) [Plasmodium falciparum] 23 7.4
AAW78152 TRAP (Invasion) [Plasmodium falciparum] 23 7.4
AAW78162 TRAP (Invasion) [Plasmodium falciparum] 23 7.4
AAW78135 TRAP (Invasion) [Plasmodium falciparum] 23 7.4
AAW78137 TRAP (Invasion) [Plasmodium falciparum] 23 7.4
AAW78139 TRAP (Invasion) [Plasmodium falciparum] 23 7.4
AAW78153 TRAP (Invasion) [Plasmodium falciparum] 23 7.4
AAQ11894 TRAP (Invasion) [Plasmodium falciparum] 23 7.4
AAQ11895 TRAP (Invasion) [Plasmodium falciparum] 23 7.4
AAA29771 TRAP (Invasion) [Plasmodium falciparum] 23 7.4
AAA29776 TRAP (Invasion) [Plasmodium falciparum] 23 7.4
AAA29775 TRAP (Invasion) [Plasmodium falciparum] 23 7.4
AAW78132 TRAP (Invasion) [Plasmodium falciparum] 23 7.4
AAW78133 TRAP (Invasion) [Plasmodium falciparum] 23 7.4
AAW78148 TRAP (Invasion) [Plasmodium falciparum] 23 7.4
AAW78136 TRAP (Invasion) [Plasmodium falciparum] 23 7.4
AAW78161 TRAP (Invasion) [Plasmodium falciparum] 23 7.4
AAA29774 TRAP (Invasion) [Plasmodium falciparum] 23 7.4
AAW78138 TRAP (Invasion) [Plasmodium falciparum] 23 7.5
AAW78175 TRAP (Invasion) [Plasmodium falciparum] 23 7.5
AAW78151 TRAP (Invasion) [Plasmodium falciparum] 23 7.5
AAW78166 TRAP (Invasion) [Plasmodium falciparum] 23 7.5
AAA29770 TRAP (Invasion) [Plasmodium falciparum] 23 7.5
AAA29777 TRAP (Invasion) [Plasmodium falciparum] 23 7.5
AAA29772 TRAP (Invasion) [Plasmodium falciparum] 23 7.6
AAA29778 TRAP (Invasion) [Plasmodium falciparum] 23 7.9
AAW78173 TRAP (Invasion) [Plasmodium falciparum] 23 8.0
AAW78176 TRAP (Invasion) [Plasmodium falciparum] 23 8.0
AAW78134 TRAP (Invasion) [Plasmodium falciparum] 23 8.0
AAW78169 TRAP (Invasion) [Plasmodium falciparum] 23 8.0
AAA29773 TRAP (Invasion) [Plasmodium falciparum] 23 8.0
AAW78177 TRAP (Invasion) [Plasmodium falciparum] 23 8.2
AAW78172 TRAP (Invasion) [Plasmodium falciparum] 23 8.2
AAW78131 TRAP (Invasion) [Plasmodium falciparum] 23 8.2
AAW78160 TRAP (Invasion) [Plasmodium falciparum] 23 8.2
AAQ11892 TRAP (Invasion) [Plasmodium falciparum] 23 8.2
AAW78167 TRAP (Invasion) [Plasmodium falciparum] 23 8.2
AAW78156 TRAP (Invasion) [Plasmodium falciparum] 23 8.2
AAW78171 TRAP (Invasion) [Plasmodium falciparum] 23 8.2
AAQ11891 TRAP (Invasion) [Plasmodium falciparum] 23 8.3
>M.Javanica_Scaff3867g031622 on AAW78157 TRAP (Invasion) [Plasmodium falciparum]
Length = 557
Score = 24.6 bits (52), Expect = 2.0, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
SNG +L+ D W N+ IG
Sbjct: 208 SNGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on XP_807173 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 734
Score = 24.3 bits (51), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 17 MYRPHWLMNEYGYEYPTASNIVFSNGDADLWLDGGW 52
+YRP + E S+ V + D D+W+ GW
Sbjct: 181 LYRPTAVARENKVFLLVGSDTVGYDSDDDMWVKDGW 216
>M.Javanica_Scaff3867g031622 on XP_804448 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 748
Score = 23.5 bits (49), Expect = 4.4, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 30/66 (45%), Gaps = 9/66 (13%)
Query: 39 FSNGDADLWLDGGWRNINTNIGSIYSLIVK--DGTHGYDIREANPLDTQSVKDVRNQEKQ 96
+ NGD +W+ GW +I + ++ + DG I A P ++ + N K
Sbjct: 205 YDNGDDVIWVKDGW-----DIQLVEGMVTQSTDGVQSTLINWAEP--KSLLQQIPNHTKD 257
Query: 97 HIRNWI 102
+R+++
Sbjct: 258 QLRDFV 263
>M.Javanica_Scaff3867g031622 on AAW78158 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 22.7 bits (47), Expect = 6.9, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on AAW78163 TRAP (Invasion) [Plasmodium falciparum]
Length = 565
Score = 22.7 bits (47), Expect = 6.9, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on AAW78141 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 22.7 bits (47), Expect = 7.0, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on AAW78150 TRAP (Invasion) [Plasmodium falciparum]
Length = 569
Score = 22.7 bits (47), Expect = 7.0, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on AAW78144 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 22.7 bits (47), Expect = 7.0, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on AAW78159 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 22.7 bits (47), Expect = 7.3, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on AAW78168 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 22.7 bits (47), Expect = 7.3, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on AAW78174 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 22.7 bits (47), Expect = 7.3, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on AAW78164 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 22.7 bits (47), Expect = 7.4, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on AAW78165 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 22.7 bits (47), Expect = 7.4, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on AAW78149 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 22.7 bits (47), Expect = 7.4, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on AAW78152 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 22.7 bits (47), Expect = 7.4, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on AAW78162 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 22.7 bits (47), Expect = 7.4, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on AAW78135 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 22.7 bits (47), Expect = 7.4, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on AAW78137 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 22.7 bits (47), Expect = 7.4, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on AAW78139 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 22.7 bits (47), Expect = 7.4, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on AAW78153 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 22.7 bits (47), Expect = 7.4, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on AAQ11894 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 22.7 bits (47), Expect = 7.4, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on AAQ11895 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 22.7 bits (47), Expect = 7.4, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on AAA29771 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 22.7 bits (47), Expect = 7.4, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on AAA29776 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 22.7 bits (47), Expect = 7.4, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on AAA29775 TRAP (Invasion) [Plasmodium falciparum]
Length = 574
Score = 22.7 bits (47), Expect = 7.4, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on AAW78132 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 22.7 bits (47), Expect = 7.4, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on AAW78133 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 22.7 bits (47), Expect = 7.4, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on AAW78148 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 22.7 bits (47), Expect = 7.4, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on AAW78136 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 22.7 bits (47), Expect = 7.4, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on AAW78161 TRAP (Invasion) [Plasmodium falciparum]
Length = 554
Score = 22.7 bits (47), Expect = 7.4, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on AAA29774 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 22.7 bits (47), Expect = 7.4, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on AAW78138 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 22.7 bits (47), Expect = 7.5, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on AAW78175 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 22.7 bits (47), Expect = 7.5, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on AAW78151 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 22.7 bits (47), Expect = 7.5, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on AAW78166 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 22.7 bits (47), Expect = 7.5, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on AAA29770 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 22.7 bits (47), Expect = 7.5, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on AAA29777 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 22.7 bits (47), Expect = 7.5, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on AAA29772 TRAP (Invasion) [Plasmodium falciparum]
Length = 565
Score = 22.7 bits (47), Expect = 7.6, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on AAA29778 TRAP (Invasion) [Plasmodium falciparum]
Length = 562
Score = 22.7 bits (47), Expect = 7.9, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on AAW78173 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 22.7 bits (47), Expect = 8.0, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on AAW78176 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 22.7 bits (47), Expect = 8.0, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on AAW78134 TRAP (Invasion) [Plasmodium falciparum]
Length = 551
Score = 22.7 bits (47), Expect = 8.0, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on AAW78169 TRAP (Invasion) [Plasmodium falciparum]
Length = 551
Score = 22.7 bits (47), Expect = 8.0, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on AAA29773 TRAP (Invasion) [Plasmodium falciparum]
Length = 568
Score = 22.7 bits (47), Expect = 8.0, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on AAW78177 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 22.7 bits (47), Expect = 8.2, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on AAW78172 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 22.7 bits (47), Expect = 8.2, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on AAW78131 TRAP (Invasion) [Plasmodium falciparum]
Length = 557
Score = 22.7 bits (47), Expect = 8.2, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on AAW78160 TRAP (Invasion) [Plasmodium falciparum]
Length = 557
Score = 22.7 bits (47), Expect = 8.2, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on AAQ11892 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 22.7 bits (47), Expect = 8.2, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
>M.Javanica_Scaff3867g031622 on AAW78167 TRAP (Invasion) [Plasmodium falciparum]
Length = 575
Score = 22.7 bits (47), Expect = 8.2, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 40 SNGDADLWLDGGWRNINTNIG 60
S+G +L+ D W N+ IG
Sbjct: 208 SDGKCNLYADSAWENVKNVIG 228
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff25069g090327
(352 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_817877 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.19
XP_807804 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 8.0
XP_819719 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 8.2
XP_001352170 MSP1 (Invasion) [Plasmodium falciparum] 25 8.5
XP_650534 HgI (Adhesin) [Entamoeba histolytica] 25 9.1
>M.Javanica_Scaff25069g090327 on XP_817877 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 900
Score = 30.4 bits (67), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/46 (26%), Positives = 19/46 (41%)
Query: 250 CIDSKWRCDGEPDCPDHSDEADCKPDKLHPYLHPLNCTAHEFKCES 295
+D DGEP D + +++ P + +N TAH S
Sbjct: 822 TVDGGSTADGEPKMEKREGGTDAQEEEVQPQVRKVNATAHSSNLGS 867
>M.Javanica_Scaff25069g090327 on XP_807804 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1054
Score = 25.0 bits (53), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Query: 249 FCIDSKWRC--DGEPDCPDHSDEADCKPD-KLHPYLH 282
+ D KW +G + P H D+ + KP+ K H LH
Sbjct: 612 YTHDKKWMVAFNGSFEAPSHDDDVEWKPNTKYHVALH 648
>M.Javanica_Scaff25069g090327 on XP_819719 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1053
Score = 25.0 bits (53), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Query: 249 FCIDSKWRC--DGEPDCPDHSDEADCKPD-KLHPYLH 282
+ D KW +G + P H D+ + KP+ K H LH
Sbjct: 611 YTHDKKWMVAFNGSFEAPSHDDDVEWKPNTKYHVALH 647
>M.Javanica_Scaff25069g090327 on XP_001352170 MSP1 (Invasion) [Plasmodium falciparum]
Length = 1720
Score = 25.0 bits (53), Expect = 8.5, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 37/99 (37%), Gaps = 23/99 (23%)
Query: 166 CIPKEWVCDGQTDC---LDMKDEANCTDTPK---DICDHQTEFRCNDGQCIYKHWRCDGD 219
C+ K+ C + C LD ++E C K D C CN+ + CD D
Sbjct: 1613 CVKKQ--CPENSGCFRHLDEREECKCLLNYKQEGDKCVENPNPTCNE-----NNGGCDAD 1665
Query: 220 HDCRDRSDETDCKEAACEGI---------GKFKCKSNNF 249
C + + K+ CE G F C S+NF
Sbjct: 1666 ATCTEEDSGSSRKKITCECTKPDSYPLFDGIF-CSSSNF 1703
>M.Javanica_Scaff25069g090327 on XP_650534 HgI (Adhesin) [Entamoeba histolytica]
Length = 1207
Score = 25.0 bits (53), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 90/236 (38%), Gaps = 37/236 (15%)
Query: 135 CLYKDDEENCPKIKCDDNHFECKGFDNLLTSC---IPKEWVCDGQTDCLDMKDEANCTDT 191
C Y D + C + DN E KG D + C + KE+ +G T + ++E C +
Sbjct: 614 CDYTDGDPKCINV---DNCEELKGHDIVWEGCYKKVCKEYTANGTTQYVVDQEEYVCKEK 670
Query: 192 PKDICDHQTEFRCNDGQCIYKHWRCDGDHDCRDRSDETDCKE-AACEGIGKF-KCKSNNF 249
+ CD Y ++ C G+ +C + + +E C+G KC+
Sbjct: 671 VPEKCDG------------YANYVCSGNRECILVTTDKAIQECKICDGNEIVNKCEGLTT 718
Query: 250 CIDSKWRC-DGEPDCPDHSDEADCKPDKLHPYLHPLNCTAHEFKCESGVQCISKFWLCDG 308
+ C DGE PD D D D+L +C+ V+ SK L
Sbjct: 719 SQGIPFVCKDGECQAPDEYDCKDLFKDRLSDCEQYYEWEYANGECKVIVKDGSKVIL--- 775
Query: 309 DHDCFDGS------DEFNCVKSKCPAKQK------VCKDGQC-IDENLWCDGTEDF 351
D C S D +K C K+ VC+DG C ID+ C E+F
Sbjct: 776 DSQCMYCSYDNILVDPAKLIKMDCTNKKNINGIPYVCRDGSCHIDDEFDCTKHENF 831
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4056g032639
(132 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001611366 variant erythrocyte surface antigen-1, beta subuni... 27 0.27
XP_808182 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.71
XP_001609566 variant erythrocyte surface antigen-1, beta subuni... 26 1.0
XP_810288 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.8
XP_001612315 variant erythrocyte surface antigen-1, beta subuni... 25 2.0
XP_811897 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.1
XP_808176 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.5
XP_001611365 variant erythrocyte surface antigen-1, alpha subun... 24 4.0
XP_805896 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.0
XP_821898 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.0
XP_821904 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.1
XP_001610497 variant erythrocyte surface antigen-1, alpha subun... 23 5.5
XP_001610721 variant erythrocyte surface antigen-1, alpha subun... 23 5.5
XP_001609167 variant erythrocyte surface antigen-1, alpha subun... 23 5.6
XP_001350582 PTRAMP (Adhesin) [Plasmodium falciparum] 23 5.6
XP_001611736 variant erythrocyte surface antigen-1, alpha subun... 23 6.2
>M.Javanica_Scaff4056g032639 on XP_001611366 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1173
Score = 27.3 bits (59), Expect = 0.27, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 15/38 (39%)
Query: 22 GKKCKCPLKQTKNSLFHRRFKRGNCC-PGGEGATNNHD 58
GK+CKC G CC PGG AT HD
Sbjct: 156 GKECKC--------------VGGTCCSPGGSAATTCHD 179
>M.Javanica_Scaff4056g032639 on XP_808182 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 918
Score = 26.2 bits (56), Expect = 0.71, Method: Composition-based stats.
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 102 VQFNVNFFPENNKRVDW 118
V+ VN ENNK++DW
Sbjct: 202 VEVKVNSVEENNKKIDW 218
>M.Javanica_Scaff4056g032639 on XP_001609566 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1062
Score = 25.8 bits (55), Expect = 1.0, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 15/37 (40%), Gaps = 12/37 (32%)
Query: 22 GKKCKCPLKQTKNSLFHRRFKRGNCCPGGEGATNNHD 58
GK+CKCP G CC G G T HD
Sbjct: 151 GKECKCPAGVG-----------GQCCTGA-GGTTCHD 175
>M.Javanica_Scaff4056g032639 on XP_810288 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 874
Score = 25.0 bits (53), Expect = 1.8, Method: Composition-based stats.
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 102 VQFNVNFFPENNKRVDW 118
V+ VN ENNK++DW
Sbjct: 201 VKGKVNSVEENNKKIDW 217
>M.Javanica_Scaff4056g032639 on XP_001612315 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1140
Score = 25.0 bits (53), Expect = 2.0, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 14/37 (37%), Gaps = 10/37 (27%)
Query: 22 GKKCKCPLKQTKNSLFHRRFKRGNCCPGGEGATNNHD 58
GKKC CP + NCC AT H+
Sbjct: 153 GKKCTCPGTRGGT----------NCCNSASAATTCHE 179
>M.Javanica_Scaff4056g032639 on XP_811897 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 879
Score = 24.3 bits (51), Expect = 3.1, Method: Composition-based stats.
Identities = 8/20 (40%), Positives = 15/20 (75%)
Query: 102 VQFNVNFFPENNKRVDWDSV 121
V+ +V+ ENNK++DW+ +
Sbjct: 205 VKESVDIEDENNKKIDWEVI 224
>M.Javanica_Scaff4056g032639 on XP_808176 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 889
Score = 24.3 bits (51), Expect = 3.5, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 47 CPGGEGATNNHDEGFTRRPGKEPMREV 73
C GG G T + + GKEP EV
Sbjct: 112 CKGGNGFTGIASQLLSMDKGKEPKEEV 138
>M.Javanica_Scaff4056g032639 on XP_001611365 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1335
Score = 23.9 bits (50), Expect = 4.0, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 44 GNCCPGGEGATNNHDEGFTR 63
G CCP G NN +G T+
Sbjct: 926 GQCCPLPMGFRNNFQDGVTQ 945
>M.Javanica_Scaff4056g032639 on XP_805896 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 692
Score = 23.5 bits (49), Expect = 5.0, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Query: 20 STGKKCKCP--LKQTKNSLFHRRFKRGNCCPGGEGATNNHDEGFTRRPGKEPMREV 73
+ G C+ P +K ++ R F +C G + ++G+ P EP+ V
Sbjct: 290 TPGNGCRDPTLVKWKEDQYGERLFMMAHCAGGYYDVYRSTEDGYNWNPDGEPITRV 345
>M.Javanica_Scaff4056g032639 on XP_821898 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 846
Score = 23.5 bits (49), Expect = 5.0, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 51 EGATNNHDEGFTRRPGKEPMREVEQIKQVQRKGKNG 86
EGA ++ G ++ GKEP+ E G NG
Sbjct: 755 EGANSSSTAGRQQQAGKEPLLESSIANGETAGGTNG 790
>M.Javanica_Scaff4056g032639 on XP_821904 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 851
Score = 23.5 bits (49), Expect = 5.1, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 51 EGATNNHDEGFTRRPGKEPMREVEQIKQVQRKGKNG 86
EGA ++ G ++ GKEP+ E G NG
Sbjct: 760 EGANSSSTAGRQQQAGKEPLLESSIANGETAGGTNG 795
>M.Javanica_Scaff4056g032639 on XP_001610497 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1315
Score = 23.5 bits (49), Expect = 5.5, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 44 GNCCPGGEGATNNHDEGFT 62
G CCP G NN +G T
Sbjct: 915 GQCCPLPMGFRNNFQDGVT 933
>M.Javanica_Scaff4056g032639 on XP_001610721 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1331
Score = 23.5 bits (49), Expect = 5.5, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 44 GNCCPGGEGATNNHDEGFT 62
G CCP G NN +G T
Sbjct: 921 GQCCPLPMGFRNNFQDGVT 939
>M.Javanica_Scaff4056g032639 on XP_001609167 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1317
Score = 23.5 bits (49), Expect = 5.6, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 44 GNCCPGGEGATNNHDEGFT 62
G CCP G NN +G T
Sbjct: 917 GQCCPLPMGFRNNFQDGVT 935
>M.Javanica_Scaff4056g032639 on XP_001350582 PTRAMP (Adhesin) [Plasmodium falciparum]
Length = 352
Score = 23.5 bits (49), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 8 YIFLFFLIFINSSTGKKCKCPLKQTKN 34
Y++ FL+F+ S+ C C LK N
Sbjct: 11 YLYFTFLLFLYISSNDLCSCNLKVRNN 37
>M.Javanica_Scaff4056g032639 on XP_001611736 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1365
Score = 23.5 bits (49), Expect = 6.2, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 44 GNCCPGGEGATNNHDEGFT 62
G CCP G NN +G T
Sbjct: 941 GQCCPLPMGFRNNFQDGVT 959
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2713g024761
(340 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff30531g097632
(71 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_654447 Igl1 (Adhesin) [Entamoeba histolytica] 22 4.7
>M.Javanica_Scaff30531g097632 on XP_654447 Igl1 (Adhesin) [Entamoeba histolytica]
Length = 1101
Score = 21.9 bits (45), Expect = 4.7, Method: Composition-based stats.
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 47 TKSSSKITTTTFDNSSNL 64
+K+ SK T T DN +NL
Sbjct: 238 SKTDSKCTICTVDNPNNL 255
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff813g010167
(144 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001348153 MAEBL (Adhesin) [Plasmodium falciparum] 25 2.7
XP_816303 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 6.3
XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum] 23 8.7
>M.Javanica_Scaff813g010167 on XP_001348153 MAEBL (Adhesin) [Plasmodium falciparum]
Length = 2054
Score = 24.6 bits (52), Expect = 2.7, Method: Composition-based stats.
Identities = 7/25 (28%), Positives = 15/25 (60%)
Query: 46 ISNARCSDLIIYPINAVDQSDQYRF 70
I+N +C L++ P +D+ + + F
Sbjct: 970 IANGKCYHLVVKPTCVIDKENHFSF 994
>M.Javanica_Scaff813g010167 on XP_816303 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 955
Score = 23.5 bits (49), Expect = 6.3, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Query: 80 THGLGASVTVTCTTDSQPATVEGYDQQRASITSSPALIASCSQVEGSQYTWTVHT 134
T G GAS T T + PA E D + +SP + V S TV T
Sbjct: 790 TDGGGASTTALSTVTTSPAGKESVDLLASG--TSPGGTQAVDGVSSSDGNQTVDT 842
>M.Javanica_Scaff813g010167 on XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2980
Score = 23.1 bits (48), Expect = 8.7, Method: Composition-based stats.
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 20 NKENYKNNEENACASP 35
+K +KN EE AC P
Sbjct: 1236 DKSKFKNGEEGACMPP 1251
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff286g004413
(317 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_806989 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.9
>M.Javanica_Scaff286g004413 on XP_806989 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 922
Score = 26.9 bits (58), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 6/46 (13%)
Query: 12 LILFYYSVKCD------NIAKINSDITYQLIDGFGGSSAWLGNIPD 51
++ +Y VK D IA NSD T L+ G+G S+ L + D
Sbjct: 112 IVFDHYDVKIDRLLSPTTIANGNSDDTNALVGGYGTSTTPLTELTD 157
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3737g030884
(169 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5846g041315
(562 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7671g049010
(163 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609936 variant erythrocyte surface antigen-1, beta subuni... 23 10.0
>M.Javanica_Scaff7671g049010 on XP_001609936 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1133
Score = 23.1 bits (48), Expect = 10.0, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 11/81 (13%)
Query: 12 LFLLFTFLVVLGDSAEPLKEGLEKQPVNSINELVPNDDERKPLLDGSNE--------NNG 63
LF + ++V +G ++ G+ +Q VN + + + L G + N G
Sbjct: 820 LFGFYYYIVYIGGNS---ASGVGEQEVNKALGIYEQESKLHMLGGGPDAVVEALTTWNGG 876
Query: 64 SDHGCFEGWINYRNDLCFYGS 84
S GC G ++ C YG+
Sbjct: 877 SSTGCSAGGCTEKSLKCLYGN 897
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7676g049026
(150 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_843643 VSG (Establishment) [Trypanosoma brucei] 27 0.73
>M.Javanica_Scaff7676g049026 on XP_843643 VSG (Establishment) [Trypanosoma brucei]
Length = 516
Score = 26.6 bits (57), Expect = 0.73, Method: Composition-based stats.
Identities = 10/17 (58%), Positives = 12/17 (70%)
Query: 60 GPDPDDDMDSGYTDTQG 76
GPD DD +DSG+T G
Sbjct: 180 GPDNDDIVDSGFTKIAG 196
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6982g046249
(1526 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_654447 Igl1 (Adhesin) [Entamoeba histolytica] 33 0.14
XP_652394 Igl2 (Adhesin) [Entamoeba histolytica] 31 0.77
PFE0340c ROM4 (Invasion) [Plasmodium falciparum] 30 0.99
XP_001608785 variant erythrocyte surface antigen-1, alpha subun... 27 9.7
>M.Javanica_Scaff6982g046249 on XP_654447 Igl1 (Adhesin) [Entamoeba histolytica]
Length = 1101
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 34/97 (35%), Gaps = 5/97 (5%)
Query: 265 SRIG-----DISAGFQTEQPQARCAQCKMDWYKQKEGDQQQSGTAEHPCAKCDPKRIKEE 319
SR G + S GF P + C C Y KEG++ + CA C K
Sbjct: 797 SRTGFIYATECSDGFSGRSPYSNCTTCTKSNYYPKEGEKNGCAKCDDKCATCSDKDTCLT 856
Query: 320 TLDRQTVMRAMLKCGSEQRMIEGKQQETPNSCQLDSS 356
D V C + M G+ + N C SS
Sbjct: 857 CADPLKVGSKCDGCKTGYYMSNGECKPCTNHCSECSS 893
>M.Javanica_Scaff6982g046249 on XP_652394 Igl2 (Adhesin) [Entamoeba histolytica]
Length = 1105
Score = 30.8 bits (68), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 37/108 (34%), Gaps = 5/108 (4%)
Query: 265 SRIG-----DISAGFQTEQPQARCAQCKMDWYKQKEGDQQQSGTAEHPCAKCDPKRIKEE 319
SR G + S GF P + C C Y KEG++ + CA C K
Sbjct: 801 SRTGYIYATECSDGFSGRSPYSNCTTCIESNYYPKEGEKNGCAKCDDKCATCSDKDTCLT 860
Query: 320 TLDRQTVMRAMLKCGSEQRMIEGKQQETPNSCQLDSSEMRSMYVYKNT 367
D + +C + M G+ + N C SS +T
Sbjct: 861 CTDPLKIGSKCDECKTGYYMSNGECKPCTNHCSECSSAAECTVCESDT 908
>M.Javanica_Scaff6982g046249 on PFE0340c ROM4 (Invasion) [Plasmodium falciparum]
Length = 759
Score = 30.4 bits (67), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 669 CRAKAIDALRRLTTSQQMIVQHIILPIYLNNQE 701
CR K + + R+T + +I+ I+L IYL N++
Sbjct: 674 CRMKLREWIVRITAASTLIIMWIVLFIYLLNEK 706
>M.Javanica_Scaff6982g046249 on XP_001608785 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 954
Score = 26.9 bits (58), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 14/62 (22%), Positives = 29/62 (46%)
Query: 720 PSVIDQIIYTMSQEPNKRVKAYTYQTMKMVAKSKNPADRQMAKHVKNAMQSANVDEQQLW 779
P I +I+Y +S P + + K + +P D++++ H + VDE L+
Sbjct: 468 PKTIREILYWLSALPYSQAYPEILKHGKSALEKVSPKDKKLSFHQEGRWAPITVDEFNLF 527
Query: 780 SY 781
++
Sbjct: 528 AH 529
Score = 26.9 bits (58), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 14/62 (22%), Positives = 29/62 (46%)
Query: 1058 PSVIDQIIYTMSQEPNKRVKAYTYQTMKMVAKSKNPADRQMAKHVKNAMQSANVDEQQLW 1117
P I +I+Y +S P + + K + +P D++++ H + VDE L+
Sbjct: 468 PKTIREILYWLSALPYSQAYPEILKHGKSALEKVSPKDKKLSFHQEGRWAPITVDEFNLF 527
Query: 1118 SY 1119
++
Sbjct: 528 AH 529
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2899g025936
(192 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351563 PfEMP1 (Establishment) [Plasmodium falciparum] 26 1.4
XP_821293 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.8
XP_820795 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.4
XP_628559 gp900 (Adhesin) [Cryptosporidium parvum] 24 5.5
XP_807358 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 6.0
XP_818477 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 8.8
>M.Javanica_Scaff2899g025936 on XP_001351563 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2149
Score = 26.2 bits (56), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 13 YKCYFFLNQFKSWRGTIKRFYD-ERSSISQAISYSDNNYTDSQSSSSNLQQIRSF 66
+KC+F N F W G K +D ++ +Q I N + + ++N ++ F
Sbjct: 378 HKCFFACNPFVKWLGNQKLEFDKQKKKYTQEIEKYKNGTKQATNGTTNNLYVKDF 432
>M.Javanica_Scaff2899g025936 on XP_821293 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 786
Score = 25.0 bits (53), Expect = 3.8, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 86 GSDNGQEDSQSTDYSYRDRK 105
G +GQE S S +++RD+K
Sbjct: 68 GPSSGQESSPSPSFAWRDKK 87
>M.Javanica_Scaff2899g025936 on XP_820795 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 782
Score = 24.6 bits (52), Expect = 4.4, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 86 GSDNGQEDSQSTDYSYRDRKRRSVSLMSQSNKGKEENGGI 125
G+ GQ +S S+ +RD K ++SL+ + E NGG+
Sbjct: 73 GTAQGQGNSPSSSLGWRDAKGETLSLLRVPSL-VEVNGGV 111
>M.Javanica_Scaff2899g025936 on XP_628559 gp900 (Adhesin) [Cryptosporidium parvum]
Length = 1937
Score = 24.3 bits (51), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
Query: 127 GNNFDKNQIINFDSKHQFRKVSVQSTLDGTQSFVAGNTTRNPYFPTN 173
GN FD + + D +Q ST+ G+ S G T P P N
Sbjct: 1313 GNLFDPSTNLPIDGNNQLVNPETNSTVSGSTS---GTTKPKPGIPVN 1356
>M.Javanica_Scaff2899g025936 on XP_807358 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 872
Score = 24.3 bits (51), Expect = 6.0, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 90 GQEDSQSTDYSYRDRKRRSVS 110
GQE S S+ + +RD K +VS
Sbjct: 137 GQESSPSSSFGWRDAKGETVS 157
>M.Javanica_Scaff2899g025936 on XP_818477 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 869
Score = 23.9 bits (50), Expect = 8.8, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 34 DERSSISQAISYSDNNYTDSQSSSSNLQQIRSFNRQDS-VNYPYYPQQDFDDEGSDNG 90
D+ +S ++A+ + + Q S R NR V P YP++ D+EG+ G
Sbjct: 330 DKGNSWTEALGTLSRVWGNKQGVGSGFITARIDNRDVMLVTLPVYPEKAQDEEGNPKG 387
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5114g037898
(88 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_829797 VSG (Establishment) [Trypanosoma brucei] 26 0.26
XP_829795 VSG (Establishment) [Trypanosoma brucei] 22 6.9
XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum] 22 7.3
>M.Javanica_Scaff5114g037898 on XP_829797 VSG (Establishment) [Trypanosoma brucei]
Length = 509
Score = 26.2 bits (56), Expect = 0.26, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 22/49 (44%)
Query: 13 IVSQVYCKCSWDKSKFMGVCNNNKAIIDSLTTCCDKREKCYHQDITINC 61
I +YC C D ++ VC N+A T+ + K ++I +C
Sbjct: 221 IAGAIYCICGQDNAQAEKVCARNQADTHKWTSITNAMTKDGFEEIVKHC 269
>M.Javanica_Scaff5114g037898 on XP_829795 VSG (Establishment) [Trypanosoma brucei]
Length = 506
Score = 21.9 bits (45), Expect = 6.9, Method: Composition-based stats.
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 66 CSCIKGVTNIANCRKEAYGL 85
C CI G T + NC +G+
Sbjct: 219 CICIDGQTGMKNCAATPHGV 238
>M.Javanica_Scaff5114g037898 on XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3954
Score = 21.9 bits (45), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 21/50 (42%)
Query: 24 DKSKFMGVCNNNKAIIDSLTTCCDKREKCYHQDITINCDKDYCSCIKGVT 73
+K K C +A I+ DK+ K Y DI+ KD S VT
Sbjct: 1574 EKKKCKSACEKYQAFIEKWKGYYDKQSKKYFYDISTGMYKDNSSAKDDVT 1623
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6396g043740
(190 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_814919 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 9.1
>M.Javanica_Scaff6396g043740 on XP_814919 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 854
Score = 23.9 bits (50), Expect = 9.1, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 122 GFKRSITSNIAEQSPPPPRRLALPGGKTQVLPLTGGNKK 160
G ++ N+ + P + LP KTQV+P +GG K
Sbjct: 129 GAVHAVERNLGDLQMRPEIAMFLPN-KTQVVPKSGGEGK 166
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2689g024602
(391 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAY44833 MSA-1 (Invasion) [Babesia bovis] 25 5.5
XP_001611901 variant erythrocyte surface antigen-1, alpha subun... 25 9.7
>M.Javanica_Scaff2689g024602 on AAY44833 MSA-1 (Invasion) [Babesia bovis]
Length = 273
Score = 25.4 bits (54), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 15/104 (14%)
Query: 184 ILQREEQMHRNATIYFREPNKAAEGNFEYTGPLDDYDYLKNWLTDKCVPLVREIT--FEN 241
+L+ ++Q I E K+ EG+FE Y + KCV L +E+ F N
Sbjct: 95 LLKEDKQFSSEGFITSTEQAKSVEGDFE------SLMYSVIQIYHKCVALNKEVNRLFPN 148
Query: 242 AEELTEEGLPFLILFRQN----DDIESEKLF---NSIVTNELFD 278
A+E E F++N D + ++ L ++ V E FD
Sbjct: 149 AKESEESIAEMKKYFKKNIYDKDTVSNQGLIAIGDAFVKAEDFD 192
>M.Javanica_Scaff2689g024602 on XP_001611901 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1211
Score = 25.0 bits (53), Expect = 9.7, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 99 GDLIKKEYRSQRSAEAIEAFIRKQLESPVQLFNSEEELSSR 139
GDL+K S + ++A + K E VQL N++E L +
Sbjct: 664 GDLLKGVKESDPIVKNLKALLEKIGEVVVQLGNAQEALEGK 704
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7124g046838
(123 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_829781 VSG (Establishment) [Trypanosoma brucei] 24 3.2
XP_001609539 variant erythrocyte surface antigen-1, beta subuni... 23 6.0
>M.Javanica_Scaff7124g046838 on XP_829781 VSG (Establishment) [Trypanosoma brucei]
Length = 514
Score = 23.9 bits (50), Expect = 3.2, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 17/38 (44%)
Query: 25 EDSTTTRTTATTVHQVKSATVGTGQLMSGQKGNDSSTS 62
E +TT+ TAT + S GQ + +G D S
Sbjct: 179 EKTTTSVITATGIKHTNSGGQENGQTIHSGQGTDCDIS 216
>M.Javanica_Scaff7124g046838 on XP_001609539 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 884
Score = 23.1 bits (48), Expect = 6.0, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 1 MSSFFYGIVAVFLLFFGNVLLEVVEDSTTTRTTATTVHQVKSATVGTGQLMSG 53
++ F G +V L++ G L + + R TA+ +H++ + G G M+
Sbjct: 228 LARIFLG--SVCLIWSGLSQLGFLTGGSGDRWTASKLHEISGDSAGLGSFMAA 278
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff25601g091147
(173 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001347288 PfEMP1 (Establishment) [Plasmodium falciparum] 24 5.0
>M.Javanica_Scaff25601g091147 on XP_001347288 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2241
Score = 24.3 bits (51), Expect = 5.0, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 26 GDSVVSGVTDGFPVAGLSVLVEAVVPPVVGPAVLEGAPVVG 66
G S + G+ G P AG+ V+ A +P VVG L PV+G
Sbjct: 1028 GQSGLPGI--GVPGAGIPVVPGAGIPGVVGANGLS-QPVLG 1065
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff30151g097170
(150 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_821088 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.8
>M.Javanica_Scaff30151g097170 on XP_821088 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 910
Score = 24.6 bits (52), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 18/57 (31%), Gaps = 9/57 (15%)
Query: 14 LLLLALPFNNAFL---------FGSLGGGGGGGGSCNSCCAPPPPPPVCAPPPSCGC 61
+LL P N A + L + +S PP PPV A G
Sbjct: 717 VLLYNRPLNEAEIGAFNPNKDPIQLLEEKPSEHSTVSSDSIVPPSPPVIATAQQTGT 773
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4666g035755
(77 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAK49430 gp63 (Invasion) [Leishmania donovani] 22 4.3
>M.Javanica_Scaff4666g035755 on AAK49430 gp63 (Invasion) [Leishmania donovani]
Length = 255
Score = 22.3 bits (46), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 14 YSPPFSSSDDFLTQSLRGGYTP 35
YS PFS + T + GGY+P
Sbjct: 148 YSTPFSLYWQYFTNASLGGYSP 169
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2579g023892
(228 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum] 25 4.5
XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum] 24 8.9
>M.Javanica_Scaff2579g023892 on XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum]
Length = 3130
Score = 25.0 bits (53), Expect = 4.5, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 134 TYGSTNVWSGNDRNSRDNEWFENSNFNKNNINTNISNYRKRP 175
T+G+++V N ++ + FE N N +N + YRK+P
Sbjct: 33 THGASSVTDFNFSEEKNLKSFEGKNNNNDNYASINRLYRKKP 74
>M.Javanica_Scaff2579g023892 on XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2994
Score = 24.3 bits (51), Expect = 8.9, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 151 NEWFENSNFNKNNINTNISNYRKRPADQNW 180
N +E F+ +N NTN+S + +RP W
Sbjct: 1448 NYMYEKVTFSSDN-NTNLSKFTERPPFFRW 1476
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7964g050153
(511 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5268g038629
(189 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351221 CTRP (Adhesin) [Plasmodium falciparum] 23 9.6
>M.Javanica_Scaff5268g038629 on XP_001351221 CTRP (Adhesin) [Plasmodium falciparum]
Length = 2112
Score = 23.5 bits (49), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 9/38 (23%)
Query: 45 IVHWEWRDL---------VCKTGDKELPGDKISEKPAE 73
++ EW DL +C TG ELP + + +P E
Sbjct: 473 VIKCEWNDLTNITKILTKICNTGSVELPKPEENPEPVE 510
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff667g008715
(435 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609450 variant erythrocyte surface antigen-1, alpha subun... 32 0.073
XP_001611900 variant erythrocyte surface antigen-1, alpha subun... 29 0.58
O00834 MIC1 (Adhesin) [Toxoplasma gondii] 28 0.65
XP_001612314 variant erythrocyte surface antigen-1, alpha subun... 29 0.78
XP_001609315 variant erythrocyte surface antigen-1, alpha subun... 28 1.1
>M.Javanica_Scaff667g008715 on XP_001609450 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1309
Score = 32.0 bits (71), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 305 DRVEVELRPRFPLFGGWRTNYVLGYNIPSSSFLHSSGSNYALRMKMMDR--LFDNAVV 360
D + +L FP G W + V GY+ ++F + +G NYA + +DR NA V
Sbjct: 337 DGIMDKLYLGFPETGKWSADSVHGYDNEDNTFRNPAGMNYAGYIHTVDRGAFCSNATV 394
>M.Javanica_Scaff667g008715 on XP_001611900 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1226
Score = 29.3 bits (64), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 305 DRVEVELRPRFPLFGGWRTNYVLGYNIPSSSFLHSSGSNYALRMKMMDR 353
D + +L FP G W V G++ +++F +G NYA + MD+
Sbjct: 380 DGIMGKLYLGFPNTGDWHNFAVHGHDNHANTFRQPAGMNYAGYIHTMDK 428
>M.Javanica_Scaff667g008715 on O00834 MIC1 (Adhesin) [Toxoplasma gondii]
Length = 255
Score = 28.5 bits (62), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 327 LGYNIPSSSFLHSSGSNYALRMKMMDRLFDNAV 359
G+ IP +H SN+A R +++ +L + V
Sbjct: 107 CGHTIPCPGGVHRQNSNHATRHEILSKLVEEGV 139
>M.Javanica_Scaff667g008715 on XP_001612314 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1308
Score = 28.9 bits (63), Expect = 0.78, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 315 FPLFGGWRTNYVLGYNIPSSSFLHSSGSNYALRMKMMDR 353
FP G W V G + +++F +G NYA + +DR
Sbjct: 381 FPDTGKWSAERVHGNDTDANTFRQPAGMNYAGYIHTVDR 419
>M.Javanica_Scaff667g008715 on XP_001609315 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1338
Score = 28.1 bits (61), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 46/122 (37%), Gaps = 20/122 (16%)
Query: 248 GAFLKGSFSRLDFQMDRRGMKQPVVRSFKSILPPATRDIYYRDEIGNISTSSVYPRN--- 304
G + KGS + +D G+ + + L + RD I N PRN
Sbjct: 321 GKWAKGSPRWNNHILDGSGLDDGTLSQWLQALG------FPRDMINNSG-----PRNRWD 369
Query: 305 ----DRVEVELRPRFPLFGGWRTNYVLGYNIPSSSFLHSSGSNYALRMKMMDR--LFDNA 358
D L FP G W+ V G + ++F +G NYA + +DR NA
Sbjct: 370 AVIWDGFRGMLYLGFPDTGDWKDISVHGNDQHDNTFRQPAGMNYAGYIHTVDRGAFCSNA 429
Query: 359 VV 360
V
Sbjct: 430 TV 431
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3912g031864
(97 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff25086g090360
(78 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_811934 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.049
XP_001348165 RESA (Others) [plasmodium falciparum] 27 0.16
XP_818308 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.19
XP_817007 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.44
XP_001351438 PfEMP1 (Establishment) [Plasmodium falciparum] 24 1.0
XP_001351439 PfEMP1 (Establishment) [Plasmodium falciparum] 24 1.1
XP_822021 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.7
XP_817001 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.8
XP_812082 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 6.3
XP_813143 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 7.2
XP_829794 VSG (Establishment) [Trypanosoma brucei] 22 7.8
XP_817994 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 8.9
>M.Javanica_Scaff25086g090360 on XP_811934 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 870
Score = 27.7 bits (60), Expect = 0.049, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 24 YKTLGVSQDASADEIKTAYRKLMMKYHPDKTKNNPVALKLSQEINNAKDILA 75
Y++ G + E+ Y K K DK ++ V+++L+ E+ KD+LA
Sbjct: 416 YRSAGSGTNKEEKELIALYEK--KKGAEDKPSHSMVSVRLTAELQRVKDVLA 465
>M.Javanica_Scaff25086g090360 on XP_001348165 RESA (Others) [plasmodium falciparum]
Length = 1085
Score = 26.6 bits (57), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 14 LAIAETISDHYKTLGVSQDASADEIKTAYRKLMMKYHP 51
+ I +T+ +Y LGV +A +EI Y KL Y+P
Sbjct: 517 IEIPDTL--YYDILGVGVNADMNEITERYFKLAENYYP 552
>M.Javanica_Scaff25086g090360 on XP_818308 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 925
Score = 26.2 bits (56), Expect = 0.19, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 24 YKTLGVSQDASADEIKTAYRKLMMKYHPDKTKNNPVALKLSQEINNAKDILA 75
YK+ G D + D + Y K K +K V+++L+ ++ KD+LA
Sbjct: 422 YKSAGSGTDDNNDGLVALYEK--KKVGDEKPSPGMVSVRLTAQLQRVKDVLA 471
>M.Javanica_Scaff25086g090360 on XP_817007 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 910
Score = 25.0 bits (53), Expect = 0.44, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 7/54 (12%)
Query: 24 YKTLGVSQDASADEIKTAYRKLMMKYHPDKTKNNP--VALKLSQEINNAKDILA 75
YK+ G D + + I RK +K K +P V+++L++++ KD+LA
Sbjct: 419 YKSAGSGDDNNEELIALYERK-----GDEKEKPSPGMVSVRLTEQLQRVKDVLA 467
>M.Javanica_Scaff25086g090360 on XP_001351438 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2312
Score = 24.3 bits (51), Expect = 1.0, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 20 ISDHYKTLGVSQDASADEIKTAYRKLMMKY-HPDKTKNNPVALKLSQEINNAKDI 73
I DH+KT + + + D I T L +++ + D T++ +L S+E+ + K +
Sbjct: 689 IKDHFKTQNIGDETNCDPIVTLEGVLKLQFLNEDSTQDKQNSLD-SEELKHLKHL 742
>M.Javanica_Scaff25086g090360 on XP_001351439 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2326
Score = 23.9 bits (50), Expect = 1.1, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 20 ISDHYKTLGVSQDASADEIKTAYRKLMMKY-HPDKTKNNPVALKLSQEINNAKDI 73
I DH+KT + + + D I T L +++ + D T++ +L S+E+ + K +
Sbjct: 703 IKDHFKTQNIGDETNCDPIVTLEGVLKLQFLNEDSTQDKQNSLD-SEELKHLKHL 756
>M.Javanica_Scaff25086g090360 on XP_822021 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 872
Score = 22.3 bits (46), Expect = 4.7, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 45 LMMKYHPDKTKNNP--VALKLSQEINNAKDILA 75
L K D K +P V+++L++++ KD+LA
Sbjct: 431 LYEKKKDDAEKPSPGIVSVRLTEQLKRVKDVLA 463
>M.Javanica_Scaff25086g090360 on XP_817001 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 928
Score = 22.3 bits (46), Expect = 4.8, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
Query: 30 SQDASADEIKTAYRKLMMKYHPDKTKNNP--VALKLSQEINNAKDILA 75
+ D +E+ Y K K +K +P V+++L++++ KD+LA
Sbjct: 424 TDDNKREELIALYEK---KKGDEKENPSPGMVSVRLTEQLQRVKDVLA 468
>M.Javanica_Scaff25086g090360 on XP_812082 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 554
Score = 21.9 bits (45), Expect = 6.3, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 6/58 (10%)
Query: 2 HYLIHSLFLLIFLAIAETISDHYKTLGVSQDASADEIKTAYRKLMMKYHPDKTKNNPV 59
H+ + L+ + I E D LGVS D+S E KL+ + +K + P+
Sbjct: 501 HFANYEFTLVASVTIHEVPRDATPLLGVSLDSSGGE------KLLGLSYEEKHQWQPI 552
>M.Javanica_Scaff25086g090360 on XP_813143 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 795
Score = 21.9 bits (45), Expect = 7.2, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 28 GVSQDASADEIKTAYRKLMMKYHPDKTKNNPVALKLSQEINNAKDILA 75
G S+ +E+ Y K + +K + V+++L+ ++ KD+LA
Sbjct: 428 GKSETNGKEELIALYEKKTAE--GEKPSSGMVSVRLTAQLQRVKDVLA 473
>M.Javanica_Scaff25086g090360 on XP_829794 VSG (Establishment) [Trypanosoma brucei]
Length = 476
Score = 21.6 bits (44), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 43 RKLMMKYHPDKTKNNP 58
R L++ YH + KN P
Sbjct: 383 RGLVLAYHASQRKNKP 398
>M.Javanica_Scaff25086g090360 on XP_817994 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 954
Score = 21.6 bits (44), Expect = 8.9, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 34 SADEIKTAYRKLMM--KYHPDKTKNNPVALKLSQE 66
S D++ T+ +M K + DK NPV L LS +
Sbjct: 592 SIDKVPTSGSVPLMGAKMNDDKNTENPVLLGLSYD 626
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6172g042775
(84 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_820670 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.64
XP_821683 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.72
XP_815148 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.4
XP_813500 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.4
XP_828093 VSG (Establishment) [Trypanosoma brucei] 22 5.7
XP_818477 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 6.5
XP_805179 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 8.6
>M.Javanica_Scaff6172g042775 on XP_820670 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 883
Score = 25.0 bits (53), Expect = 0.64, Method: Composition-based stats.
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 57 NIVRLQGKIFKILMGTCELSQTDIFT 82
++V + GK+F + C+ +T +FT
Sbjct: 101 SLVEVNGKVFAVAEAQCKKGKTSVFT 126
>M.Javanica_Scaff6172g042775 on XP_821683 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 879
Score = 24.6 bits (52), Expect = 0.72, Method: Composition-based stats.
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 57 NIVRLQGKIFKILMGTCELSQTDIFT 82
++V + GK+F + C+ +T +FT
Sbjct: 98 SLVEVNGKVFAVAEAQCKNGETSVFT 123
>M.Javanica_Scaff6172g042775 on XP_815148 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 882
Score = 23.9 bits (50), Expect = 1.4, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 18/32 (56%)
Query: 11 MRSSTSTSNLQQIVVMIQSNGSALQLFDSQSI 42
++S++ T + +VV+++S G D Q +
Sbjct: 611 LKSTSETERTRHVVVLLKSGGQGSAYVDGQRV 642
>M.Javanica_Scaff6172g042775 on XP_813500 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 898
Score = 23.9 bits (50), Expect = 1.4, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 18/32 (56%)
Query: 11 MRSSTSTSNLQQIVVMIQSNGSALQLFDSQSI 42
++S++ T + +VV+++S G D Q +
Sbjct: 632 LKSTSETERTRHVVVLLKSGGQGSAYVDGQRV 663
>M.Javanica_Scaff6172g042775 on XP_828093 VSG (Establishment) [Trypanosoma brucei]
Length = 512
Score = 22.3 bits (46), Expect = 5.7, Method: Composition-based stats.
Identities = 8/18 (44%), Positives = 14/18 (77%)
Query: 29 SNGSALQLFDSQSICTLL 46
++G+A+Q DS ++C LL
Sbjct: 199 TSGTAVQPTDSNNVCRLL 216
>M.Javanica_Scaff6172g042775 on XP_818477 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 869
Score = 21.9 bits (45), Expect = 6.5, Method: Composition-based stats.
Identities = 7/26 (26%), Positives = 15/26 (57%)
Query: 57 NIVRLQGKIFKILMGTCELSQTDIFT 82
++V + GK+F + C+ + +FT
Sbjct: 100 SLVEVNGKVFAVAEAQCKNGEDTVFT 125
>M.Javanica_Scaff6172g042775 on XP_805179 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 793
Score = 21.9 bits (45), Expect = 8.6, Method: Composition-based stats.
Identities = 8/37 (21%), Positives = 16/37 (43%)
Query: 7 TRGLMRSSTSTSNLQQIVVMIQSNGSALQLFDSQSIC 43
TR + + T Q+ +++Q+ D Q +C
Sbjct: 630 TRNALSGTWGTDATHQVAIVLQNGKQGSVYVDGQRVC 666
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff8339g051602
(61 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3207g027808
(110 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351513 PfEMP1 (Establishment) [Plasmodium falciparum] 25 1.6
XP_804105 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.8
XP_812514 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.6
>M.Javanica_Scaff3207g027808 on XP_001351513 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2152
Score = 24.6 bits (52), Expect = 1.6, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 17 DSKKKKIFQFRHGLAVSKEIFKY 39
++K K+I + H SKEI+KY
Sbjct: 1113 NTKDKEIIKLAHHNLTSKEIYKY 1135
>M.Javanica_Scaff3207g027808 on XP_804105 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1017
Score = 23.5 bits (49), Expect = 3.8, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 82 PPPSIHQLILLLLPNPNLHFL 102
P SIH + + +PNP FL
Sbjct: 777 PSASIHSVSTVPIPNPGKEFL 797
>M.Javanica_Scaff3207g027808 on XP_812514 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 925
Score = 23.1 bits (48), Expect = 4.6, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 42 SSQDQSWKFTFHSPDRLQVTDLQF 65
+S+ WK T SP RL T L F
Sbjct: 213 NSKKIDWKVTESSPQRLFGTQLDF 236
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5136g038020
(65 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_812042 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.6
XP_814899 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.7
XP_827742 VSG (Establishment) [Trypanosoma brucei] 22 3.0
XP_816729 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 3.6
XP_818690 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 3.7
XP_803651 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.3
XP_817001 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 6.1
>M.Javanica_Scaff5136g038020 on XP_812042 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 227
Score = 23.1 bits (48), Expect = 1.6, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 7 LFYLKILLFVLSIIYSATQSIAAETSPSS 35
LFY ++LLF+L ++ A P+S
Sbjct: 43 LFYSEVLLFLLFVMMCRGSGATATDKPNS 71
>M.Javanica_Scaff5136g038020 on XP_814899 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 827
Score = 23.1 bits (48), Expect = 1.7, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 7 LFYLKILLFVLSIIYSATQSIAAETSPS 34
LFY +LL ++ ++ T + AE PS
Sbjct: 43 LFYSAVLLLLVVMMCCGTGGVHAEVQPS 70
>M.Javanica_Scaff5136g038020 on XP_827742 VSG (Establishment) [Trypanosoma brucei]
Length = 505
Score = 22.3 bits (46), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 18/66 (27%)
Query: 17 LSIIYSATQSIAAETSPSSMATQSIAAI------------------TGPSSMADPQSSSD 58
L+ + S T SIA P + +TQSIAA T S P+ +
Sbjct: 377 LTTLNSDTNSIADGDKPITGSTQSIAAGANFRKAMTYFYAMNLKKSTKASGSEKPEGDAK 436
Query: 59 KNSPDK 64
KN+ DK
Sbjct: 437 KNAADK 442
>M.Javanica_Scaff5136g038020 on XP_816729 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 890
Score = 21.9 bits (45), Expect = 3.6, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 7 LFYLKILLFVLSIIYSATQSIAAETS-PSSMATQSIAAIT 45
LFY +LLF + ++ A++ AE S P + T + IT
Sbjct: 43 LFYSVVLLFCVVVMCCASEDAHAEESNPVTAPTFAWKGIT 82
>M.Javanica_Scaff5136g038020 on XP_818690 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 112
Score = 21.9 bits (45), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 7 LFYLKILLFVLSIIYSATQSIAAETSPSSMATQSIAAITG 46
LFY +LL VL ++ + A + + +T S + +TG
Sbjct: 43 LFYSAVLLLVLVMMCCGGAATAEVENNADASTPSGSKLTG 82
>M.Javanica_Scaff5136g038020 on XP_803651 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 238
Score = 21.6 bits (44), Expect = 5.3, Method: Composition-based stats.
Identities = 8/29 (27%), Positives = 18/29 (62%)
Query: 7 LFYLKILLFVLSIIYSATQSIAAETSPSS 35
LFY +L+F++ +++ + +A+ SS
Sbjct: 43 LFYSAVLIFLVMVMFCGRGAASADVKESS 71
>M.Javanica_Scaff5136g038020 on XP_817001 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 928
Score = 21.6 bits (44), Expect = 6.1, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 4/37 (10%)
Query: 26 SIAAETSPSSMATQSIAAITGPSSMAD----PQSSSD 58
SIA+ + P Q +A+ T P AD P SS +
Sbjct: 772 SIASTSIPVGQTVQQLASETSPDGNADVDVSPSSSGN 808
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff82g001599
(192 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_804895 Trans-sialidase (Invasion) [Trypanosoma cruzi] 32 0.030
XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum] 29 0.21
XP_818862 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.41
XP_001349031 PfEMP1 (Establishment) [Plasmodium falciparum] 28 0.52
XP_804139 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.70
XP_805038 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.2
>M.Javanica_Scaff82g001599 on XP_804895 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 787
Score = 31.6 bits (70), Expect = 0.030, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Query: 64 PQAEQNPSTIIYALPPPPEGSTQ---PIQQTPHQVEEEAEA 101
PQA P TI A+P P + S P+ PH VEE +E
Sbjct: 703 PQAGDVPQTIAPAVPGPEKNSAASAVPMTLDPHAVEEVSEG 743
>M.Javanica_Scaff82g001599 on XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2238
Score = 28.9 bits (63), Expect = 0.21, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Query: 85 TQPIQQTPHQVEEEAEAHPV-PWHLEAQQHPSRRHRLPTPPPGTSQ-PPQQNPPRVE-GR 141
T P Q+ + E A+ P P +Q P +LP PP + PP+QN + + R
Sbjct: 1664 TPPKQEEGEEKCEPAQTAPKKPAADSERQTP--EEKLPPPPAAKEEKPPKQNAEKTKPKR 1721
Query: 142 SPRHDD 147
SPR D
Sbjct: 1722 SPRPID 1727
>M.Javanica_Scaff82g001599 on XP_818862 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 790
Score = 27.7 bits (60), Expect = 0.41, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Query: 64 PQAEQNPSTIIYALPPPPEGSTQ---PIQQTPHQVEEEAEA 101
PQA P TI A+ P + S P+ PH VEE +E
Sbjct: 704 PQAGDVPQTIASAVSGPEKTSAAPEVPMTLDPHAVEEVSEG 744
>M.Javanica_Scaff82g001599 on XP_001349031 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2275
Score = 27.7 bits (60), Expect = 0.52, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 109 EAQQHPSRRHRLPTPPPGTSQPPQQNPPRVEGRSPRHDDQ 148
EAQ+ +R + PPP S Q PP SPR D +
Sbjct: 807 EAQKCLEKRKQ-TCPPPEESPDRSQTPPASRSDSPRVDQK 845
>M.Javanica_Scaff82g001599 on XP_804139 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 793
Score = 27.3 bits (59), Expect = 0.70, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Query: 64 PQAEQNPSTIIYALPPPPEGSTQ---PIQQTPHQVEEEAEA 101
PQA P TI A+ P + S P+ PH V+E +E
Sbjct: 707 PQAGDVPQTIASAVSGPEKNSAAPAVPMTLNPHAVKEVSEG 747
>M.Javanica_Scaff82g001599 on XP_805038 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 927
Score = 25.8 bits (55), Expect = 2.2, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 26/75 (34%), Gaps = 12/75 (16%)
Query: 77 LPPPPEGSTQPIQQTPHQVEE--EAEAHPVPWHLEAQQHPSRRHRLPTPPPGTSQPPQQN 134
+PPP Q QT A P P ++++ P P S+P +
Sbjct: 724 VPPPATAGPQQTDQTTLNTSSVPSGGAPPTPAEPKSEE----------PKPAESRPEEPK 773
Query: 135 PPRVEGRSPRHDDQN 149
P E P+ + N
Sbjct: 774 PAESESEEPKPAEPN 788
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5953g041795
(135 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
P13399 TA4 (Others) [Eimeria tenella] 25 1.9
CAE52292 SAG1 (Others) [Eimeria tenella] 25 1.9
XP_804548 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.8
XP_813615 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.0
>M.Javanica_Scaff5953g041795 on P13399 TA4 (Others) [Eimeria tenella]
Length = 253
Score = 24.6 bits (52), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 1 MNRRLLYEDRMQILVQKYNNRTSFYRQCTL 30
+N ++Y DR V YN +TS C L
Sbjct: 142 LNDPVVYNDRAVSFVALYNPKTSPVVSCVL 171
>M.Javanica_Scaff5953g041795 on CAE52292 SAG1 (Others) [Eimeria tenella]
Length = 253
Score = 24.6 bits (52), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 1 MNRRLLYEDRMQILVQKYNNRTSFYRQCTL 30
+N ++Y DR V YN +TS C L
Sbjct: 142 LNDPVVYNDRAVSFVALYNPKTSPVVSCVL 171
>M.Javanica_Scaff5953g041795 on XP_804548 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 691
Score = 24.3 bits (51), Expect = 2.8, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 31/67 (46%), Gaps = 18/67 (26%)
Query: 9 DRMQILVQKYNNRTSFYR------------------QCTLELALTLNSTPANPICIVQFY 50
+++ +LV YN+ T+++ +CT++ T N T +P+ + +F+
Sbjct: 125 NKLYVLVGGYNSSTTYWTWHGDASDWDILLAVGEVTKCTVDGKTTANITWGSPVSLKEFF 184
Query: 51 SYAVENL 57
+E +
Sbjct: 185 PREMEGV 191
>M.Javanica_Scaff5953g041795 on XP_813615 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 706
Score = 23.9 bits (50), Expect = 5.0, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 30/67 (44%), Gaps = 18/67 (26%)
Query: 9 DRMQILVQKYNNRTSFY------------------RQCTLELALTLNSTPANPICIVQFY 50
+++ +LV YN S++ ++CT++ T N T +P+ + +F+
Sbjct: 129 NKLYVLVGSYNISRSYWTWQPDGSDWDILLAVGEVKKCTVDGKTTANITWGSPVSLKEFF 188
Query: 51 SYAVENL 57
+E +
Sbjct: 189 PAEMEGI 195
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7757g049360
(164 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_812339 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.44
XP_818480 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.5
PF14_0553 Falcipain1 (Cysteine protease) [Plasmodium falciparum] 24 5.2
XP_809062 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 7.4
>M.Javanica_Scaff7757g049360 on XP_812339 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 949
Score = 27.3 bits (59), Expect = 0.44, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 26/52 (50%)
Query: 33 DNKPPKRSRKGTPQQAWTGHLGQTGPGVSMSLAKIVKTTTDEVKEEKVQNDQ 84
DN+ R+ G +Q+W+ +G G GV ++V K+ + QND+
Sbjct: 218 DNEDVSRASFGEQRQSWSRLIGGGGLGVYTDDGRLVFPVQGTKKKGEAQNDE 269
>M.Javanica_Scaff7757g049360 on XP_818480 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 926
Score = 25.0 bits (53), Expect = 2.5, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 31 SDDNKPPKRSRKGTPQQAWTGHLGQTGPGVSMSLAKIVKTTTDEVKEEKVQNDQ 84
SD N P+ S +WTG +G G GV M +V + K+ + +ND+
Sbjct: 218 SDANAVPRASVGKL--DSWTGLIGSGGSGVKMHDGTLV-LPVEGTKKSEAKNDE 268
>M.Javanica_Scaff7757g049360 on PF14_0553 Falcipain1 (Cysteine protease) [Plasmodium falciparum]
Length = 569
Score = 24.3 bits (51), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 94 EKEIPDDILLSSYIKGSKRNKTDLPNK 120
E + D+IL+S + KRN+ D+ +K
Sbjct: 306 ENHLKDNILISEFYTNGKRNEKDIFSK 332
>M.Javanica_Scaff7757g049360 on XP_809062 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 930
Score = 23.5 bits (49), Expect = 7.4, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Query: 36 PPKRSRKGTPQQAWTGHLGQTGPGVSM 62
PP+R GT +WT +G G GV M
Sbjct: 227 PPQRLF-GTQPDSWTKLIGSGGSGVKM 252
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6464g044062
(63 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_804686 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 3.8
XP_814555 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.6
AAZ15655 Cathepsin C2 (Protease) [Toxoplasma gondii] 22 5.2
>M.Javanica_Scaff6464g044062 on XP_804686 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1045
Score = 21.9 bits (45), Expect = 3.8, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 31 LCGSSPSDNCCRGLICQGL 49
LCG CC G++ + L
Sbjct: 118 LCGEKDGAGCCAGIVSKHL 136
>M.Javanica_Scaff6464g044062 on XP_814555 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 907
Score = 21.6 bits (44), Expect = 4.6, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Query: 20 QLNNGCVNENMLCGSSPSDNC-CR 42
Q+ GC+ E C + +NC CR
Sbjct: 147 QVPEGCIFEGGKCPADRKENCACR 170
>M.Javanica_Scaff6464g044062 on AAZ15655 Cathepsin C2 (Protease) [Toxoplasma gondii]
Length = 255
Score = 21.6 bits (44), Expect = 5.2, Method: Composition-based stats.
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 37 SDNCCRGLICQGLPLFIYRI 56
SD CCR + LF+ R+
Sbjct: 12 SDGCCRRRLTPAAVLFLCRV 31
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3151g027456
(201 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_966151 TLP (Invasion) [Plasmodium falciparum] 25 3.6
XP_828093 VSG (Establishment) [Trypanosoma brucei] 25 5.1
XP_805577 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 6.3
XP_001611366 variant erythrocyte surface antigen-1, beta subuni... 24 8.2
>M.Javanica_Scaff3151g027456 on XP_966151 TLP (Invasion) [Plasmodium falciparum]
Length = 1371
Score = 25.0 bits (53), Expect = 3.6, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 46 HEHSKQGFCYGKSIKAKLLAKQCKCSCANAHHRRIQNCCRTVGDHDMRFC 95
H + Y K+ K+ L ++ + SC + IQ C T DH + C
Sbjct: 284 HFSKRDSLGYIKNSKSGLYKRKGR-SCLEQRNLIIQECFNTSCDHSLDIC 332
>M.Javanica_Scaff3151g027456 on XP_828093 VSG (Establishment) [Trypanosoma brucei]
Length = 512
Score = 24.6 bits (52), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 13/55 (23%), Positives = 21/55 (38%)
Query: 53 FCYGKSIKAKLLAKQCKCSCANAHHRRIQNCCRTVGDHDMRFCLPLCGYNTTAND 107
+ Y S+ L K+ + + ++ C + D P C YNTT D
Sbjct: 375 YVYHASLNYNALQKKLDEATKKKDTKAAEDTCNKIKDETACSNKPFCTYNTTETD 429
>M.Javanica_Scaff3151g027456 on XP_805577 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 785
Score = 24.3 bits (51), Expect = 6.3, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 16/74 (21%)
Query: 100 GYNTTANDLGSGLGLKCITQLT---------IWTYCAADANDNTECCKRKGVPSECASFC 150
G NT +N L +T LT + T+ + D +T C G + + C
Sbjct: 408 GVNTDSNSL-------VLTHLTEQMRQIKTLLQTWKSVDERVSTLCSSSAGKSAPEGAVC 460
Query: 151 RGDVPTCDMSSIFS 164
G +PT + FS
Sbjct: 461 VGHLPTIGLVGFFS 474
>M.Javanica_Scaff3151g027456 on XP_001611366 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1173
Score = 23.9 bits (50), Expect = 8.2, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 5/38 (13%)
Query: 56 GKSIKAKLLAKQCKC---SCANAHHRRIQNC--CRTVG 88
G S K+K + K+CKC +C + C CRT G
Sbjct: 147 GTSGKSKGIGKECKCVGGTCCSPGGSAATTCHDCRTCG 184
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff27112g093300
(64 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ABA06438 MSA-2a/b (Invasion) [Babesia bovis] 23 1.4
ABA06442 MSA-2a/b (Invasion) [Babesia bovis] 23 1.4
>M.Javanica_Scaff27112g093300 on ABA06438 MSA-2a/b (Invasion) [Babesia bovis]
Length = 267
Score = 23.1 bits (48), Expect = 1.4, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 34 DPSKQFNVEVRAYDRDGYGVLKVVDPDDL 62
D K+ E +D+D G L + DPD +
Sbjct: 83 DLEKKVPFETTLFDKDVLGNLDLQDPDQI 111
>M.Javanica_Scaff27112g093300 on ABA06442 MSA-2a/b (Invasion) [Babesia bovis]
Length = 267
Score = 23.1 bits (48), Expect = 1.4, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 34 DPSKQFNVEVRAYDRDGYGVLKVVDPDDL 62
D K+ E +D+D G L + DPD +
Sbjct: 83 DLEKKVPFETTLFDKDVLGNLDLQDPDQI 111
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4033g032515
(832 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_814930 Trans-sialidase (Invasion) [Trypanosoma cruzi] 35 0.026
XP_001348165 RESA (Others) [plasmodium falciparum] 29 1.7
XP_818396 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 1.9
XP_812751 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 2.0
XP_815479 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 3.5
XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum] 27 4.8
XP_816853 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 7.1
XP_806381 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 9.5
>M.Javanica_Scaff4033g032515 on XP_814930 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 938
Score = 34.7 bits (78), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 74/138 (53%), Gaps = 10/138 (7%)
Query: 497 EESEEDEEESDDDEESEEDEEESDDDEESEEDEDEEESDDDEESEEDEDEEESDDDEESE 556
+E E+ +E+ D E +++ +S+D +ES + ED++ S D E+ +E D E+ + +SE
Sbjct: 759 KEVEDKKEKGSGDSEDKKESGDSEDKKESGDSEDKKGSGDSEDKKESGDSEDKKESGDSE 818
Query: 557 EDEESEEDEEESGENDDDDHTSDESSEEKSDSGV--VIDSSEEEADQNDSKDVSGGEDED 614
+ + S + ++ HT++E + +S SG + DS+E DVS E+ +
Sbjct: 819 DKKGSGDGAFTPAVSNATTHTAEEETVNQSASGTFSITDSTE--------GDVSSDENGE 870
Query: 615 DTVGEDSEEEDNNDEDSE 632
T G D +EED +D E
Sbjct: 871 TTGGADGQEEDIQPQDGE 888
>M.Javanica_Scaff4033g032515 on XP_001348165 RESA (Others) [plasmodium falciparum]
Length = 1085
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%)
Query: 473 IEDESDEDNNSDDNDSDEGSEDDDEESEEDEEESDDDEESEEDEEESDDDEESEEDEDEE 532
++DE E++ +DD +E + DDE EE + EE EE ++ +EE +E
Sbjct: 444 VDDEHVEEHTADDEHVEEPTVADDEHVEEPTVADEHVEEPTVAEEHVEEPTVAEEHVEEP 503
Query: 533 ESDDDEESEEDEDEEESD 550
SD + SE E D
Sbjct: 504 ASDVQQTSEAAPTIEIPD 521
>M.Javanica_Scaff4033g032515 on XP_818396 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1044
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 130/355 (36%), Gaps = 41/355 (11%)
Query: 289 NPGDNGINNRKGRKGQSKVDENSSNYGNGQNDGKTEGHVGRNDEESRRHNIDGESKNSNN 348
+P G R G Q K+ E S G + EG VG + R+ +
Sbjct: 629 HPFTLGTPPRDGVPAQEKIPEMVSQIFFGSDGVNLEGTVGCF---TVRNVL--------- 676
Query: 349 NYEHSYGQMDEDDDSDENESRDDDDEEDESSDDSDEGVE---SVSDNSDEDENEEVDDEK 405
YG+ D + E R+D D + DS +G S ++SD + D K
Sbjct: 677 ----LYGRCFNDSEVAALEKREDSDSSGAADTDSAKGKATGGSAGEDSDSSGAADTDSAK 732
Query: 406 -DDVGEEESEDEDDEEDESEDEDDDEDESGDEDDESDEDESGDDDDEEDKSSDEDEDESE 464
+G S ED E + D D + ++ D + SG D + K E
Sbjct: 733 VKAIGS--SAGEDGESSGAADTDSAKVKAIGSSAGEDGESSGAADTDSAKGKATGGSAGE 790
Query: 465 EDDEDGRVIEDESDEDNNSDDNDSDEGSEDDDEESEEDEEESDDDEESEEDEEESDDDEE 524
+ D G +D D+ ED + D + + E+SD
Sbjct: 791 DSDSSG-----AADTDSAKGKATGGSAGEDGESSGAADTDSAKVKAIGSSAGEDSDSSGA 845
Query: 525 SEEDEDEEESDDDEESEEDEDEEESDDDEESEEDEESE--EDEEESGENDDDDHTSDESS 582
++ D + ++ E+ + +D D + S ED E SG D D S+
Sbjct: 846 ADTDSAKGKATGGSAGEDSDSSGAADTDSAKGKATGSSAGEDGESSGAADTD------SA 899
Query: 583 EEKSDSGVVIDSSEEEADQNDSKDV--SGGEDEDDTVGEDSEEEDNNDEDSEEEE 635
+ K+ G S+ E++D + + D + G+ + GEDS+ D DS + +
Sbjct: 900 KGKATGG----SAGEDSDSSGAADTDSAKGKATGGSAGEDSDSSGAADTDSAKVK 950
>M.Javanica_Scaff4033g032515 on XP_812751 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 952
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 63/161 (39%)
Query: 426 EDDDEDESGDEDDESDEDESGDDDDEEDKSSDEDEDESEEDDEDGRVIEDESDEDNNSDD 485
E ++S + +D + + EE +S E+ ES+ D ++ ++ D +S
Sbjct: 713 EKQPTEQSKGQVASTDVSVASESKSEESAASYEELTESDTDKQEEGIVNDPVPAAPSSTL 772
Query: 486 NDSDEGSEDDDEESEEDEEESDDDEESEEDEEESDDDEESEEDEDEEESDDDEESEEDED 545
SE + S+D+ + DE ++ + +SD + + E
Sbjct: 773 VAGASISESAIAAQSAENSFSEDNAQPSGDETSWQTTLNEAKESMQRDSDVQPQDLQSEK 832
Query: 546 EEESDDDEESEEDEESEEDEEESGENDDDDHTSDESSEEKS 586
D E S E ++EE EE+ G ND T+ + S
Sbjct: 833 LTVFSDVENSSESNDTEEPEEDGGTNDRSGGTTSPVAASLS 873
Score = 26.9 bits (58), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 72/188 (38%), Gaps = 18/188 (9%)
Query: 538 EESEEDEDEEESDDDEESEED--EESEEDEEESGENDDDDHTSDESSEEKSDSGVVIDSS 595
+ +E+ + + S D + E EES EE E+D D K + G+V D
Sbjct: 715 QPTEQSKGQVASTDVSVASESKSEESAASYEELTESDTD----------KQEEGIVNDPV 764
Query: 596 EEEADQNDSKDVSGGEDEDDTVGEDSEEEDNNDEDSEEEEDDHHDEESEDEEDDHHDEEE 655
S V+G + + S E ++++++ D+ + + +E + +
Sbjct: 765 PAAPS---STLVAGASISESAIAAQSAENSFSEDNAQPSGDETSWQTTLNEAKESMQRDS 821
Query: 656 EESSSSAEEENSETDEDEENSEESNEEEEEEEEDNGGEEEEESGEEEEEKSEEEEFEEAQ 715
+ + E D ENS ESN+ EE EE+ G + SG + E
Sbjct: 822 DVQPQDLQSEKLTVFSDVENSSESNDTEEPEED---GGTNDRSGGTTSPVAASLSMETVA 878
Query: 716 EQFEGDEQ 723
G+ Q
Sbjct: 879 ASVNGEHQ 886
>M.Javanica_Scaff4033g032515 on XP_815479 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1047
Score = 27.7 bits (60), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 64/145 (44%), Gaps = 4/145 (2%)
Query: 429 DEDESGDEDDESDEDESGDDDDEEDKSSDEDEDESEEDDEDGRVIEDESDEDNNSDDNDS 488
DE +S +D + + + EE +S+E+ + ++ G+ + S D+
Sbjct: 719 DEKQSTGPVAGTDVSVAFESNSEESATSNEELTGDDTHEQRGKSVHILVPAA--SPSTDA 776
Query: 489 DEGSEDDDEESEEDEEESDDDEESEEDEEESDDDEESEEDEDEEESDDDEESEEDEDEE- 547
S + + E S ++ ++ E E+ ED + + D + +++E + EE
Sbjct: 777 AGSSVPEPATATESAGNSRSEDNAQLSEGETSQQATLNEDNESMQRDSELQTQELQSEES 836
Query: 548 -ESDDDEESEEDEESEEDEEESGEN 571
E+ D E S E +E+ EEE G N
Sbjct: 837 TEATDFEGSAESYGTEQPEEEGGTN 861
>M.Javanica_Scaff4033g032515 on XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum]
Length = 3130
Score = 27.3 bits (59), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 61/117 (52%), Gaps = 11/117 (9%)
Query: 629 EDSEEEEDDHHDEESEDEEDDHHDEEEEESSSSAEEENSETDEDEENSEESNEEEEEEEE 688
E E E+ + +E E + + ++EE+ E+E + +E+ + E+ E E++E+
Sbjct: 2759 ERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQERLEREKQEQ 2818
Query: 689 DNGGEEEEESGEEEEEKSEEEEFEEAQEQ--------FEGDEQEDKEGKCLDVSKEE 737
++EEE +E+E+ ++EE + QEQ + EQE E K +++++ E
Sbjct: 2819 ---LQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQERLERKKIELAERE 2872
>M.Javanica_Scaff4033g032515 on XP_816853 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1044
Score = 26.6 bits (57), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 80/202 (39%), Gaps = 30/202 (14%)
Query: 526 EEDEDEEESDDDEESEEDEDEEESDDDEESEEDEESEEDEEESGENDDDDHTSDESSEEK 585
EE + ++ D + + EES + DE +E D +E G+N DD SS
Sbjct: 719 EEQPTGQVANTDALVASESNSEES----ATSHDELNESDTDEQGDNSVDDPVPAASS--- 771
Query: 586 SDSGVVIDSS-EEEADQNDSKDVSGGEDEDDTVGEDSEEEDNNDEDSEEEEDDHHDEESE 644
S VV SS E A +S D S +D EE+ + +D+ EE+ S+
Sbjct: 772 --STVVAGSSVPEPAIATESADNSRSDDNAQL-----SEEETSWQDTPNEENKSMQRGSD 824
Query: 645 DEEDDHHDEEEEESSSSAEEENSETDEDEENSEESNEEEEEEEEDNGGEEEEESGEEEEE 704
+ D + E + D E S S +EE EE+ GE ++ SG+
Sbjct: 825 LQPQDPQSTKLTEVT------------DVEMSSGSYDEELPEED---GEADDRSGKSTSP 869
Query: 705 KSEEEEFEEAQEQFEGDEQEDK 726
+ E A G+ Q K
Sbjct: 870 VTASLSMETAAGPVYGEHQVQK 891
>M.Javanica_Scaff4033g032515 on XP_806381 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1045
Score = 26.2 bits (56), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
Query: 492 SEDDDEESEEDEEESDDDEESEEDEEESDDDEESEEDEDEEESDDDEESEEDEDEEESD- 550
S + + E E S D+ ++ E+++ ED + + D D + ++ + E +D
Sbjct: 778 SVPEPAIAAESAENSRSDDNAQLSEDKTSPQATMNEDSESMQRDSDVQKQDLQSAESADV 837
Query: 551 -DDEESEEDEESEEDEEESGENDDDDHTSDESSEEKS 586
D E E + E+ EEE G ND T+ + S
Sbjct: 838 TDFEMFSESNDKEQPEEEGGTNDMSGETTFPVAVSLS 874
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff26g000628
(102 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_846885 VSG (Establishment) [Trypanosoma brucei] 25 1.1
>M.Javanica_Scaff26g000628 on XP_846885 VSG (Establishment) [Trypanosoma brucei]
Length = 525
Score = 25.0 bits (53), Expect = 1.1, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 17/35 (48%)
Query: 28 QNDVNEQPQVLTDTEDFYAVDEKRVPHPGSTWRQQ 62
Q + E P+ T D+ + + + G+ WR+Q
Sbjct: 42 QRPIPELPETQQATTDYQEIQKLNISLSGTDWRKQ 76
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff27183g093393
(89 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Q03077 Lgl2 (Adhesin) [Entamoeba histolytica] 23 2.5
XP_656145 Lgl1 (Adhesin) [Entamoeba histolytica] 23 2.5
XP_820382 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 8.1
>M.Javanica_Scaff27183g093393 on Q03077 Lgl2 (Adhesin) [Entamoeba histolytica]
Length = 288
Score = 23.5 bits (49), Expect = 2.5, Method: Composition-based stats.
Identities = 7/25 (28%), Positives = 15/25 (60%)
Query: 59 PPSYPPEISTFCNFVQNGQKILKKI 83
P + PE ++ + QNG+ ++K +
Sbjct: 197 PTEWYPEYNSTTKYTQNGKTVIKTL 221
>M.Javanica_Scaff27183g093393 on XP_656145 Lgl1 (Adhesin) [Entamoeba histolytica]
Length = 288
Score = 23.5 bits (49), Expect = 2.5, Method: Composition-based stats.
Identities = 7/25 (28%), Positives = 15/25 (60%)
Query: 59 PPSYPPEISTFCNFVQNGQKILKKI 83
P + PE ++ + QNG+ ++K +
Sbjct: 197 PTEWYPEYNSTTKYTQNGKTVIKTL 221
>M.Javanica_Scaff27183g093393 on XP_820382 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 729
Score = 21.9 bits (45), Expect = 8.1, Method: Composition-based stats.
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 27 SGWVLSSGLRPSRFV 41
S WVLS G+ P++ V
Sbjct: 304 SNWVLSKGVSPAKCV 318
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff329g004964
(154 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_806844 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.74
XP_829764 VSG (Establishment) [Trypanosoma brucei] 25 3.0
XP_818091 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.1
XP_807448 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.9
>M.Javanica_Scaff329g004964 on XP_806844 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 740
Score = 26.6 bits (57), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 17 TDNNNSNFWPPNIDERVAHLDFGTSTMEDVGNTSALFGSVMGGDPRLVSTDSLDIEMLRM 76
TDNN S ++ P E A +F +S + GN L G+ R++S L E+ +
Sbjct: 414 TDNNRSFYFGPVAVEEAAKWEFASSLLYSDGNLH-LLQRRATGEGRVISLSRLTEELKEI 472
Query: 77 R 77
+
Sbjct: 473 K 473
>M.Javanica_Scaff329g004964 on XP_829764 VSG (Establishment) [Trypanosoma brucei]
Length = 434
Score = 24.6 bits (52), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 9/21 (42%), Positives = 17/21 (80%)
Query: 29 IDERVAHLDFGTSTMEDVGNT 49
I+++++ L+F ST++DVG T
Sbjct: 287 IEDKLSKLNFKASTLKDVGMT 307
>M.Javanica_Scaff329g004964 on XP_818091 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 828
Score = 24.3 bits (51), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 4/40 (10%)
Query: 18 DNNNSNFWPPNIDERVAHLDFGTSTMEDVGNTSALFGSVM 57
D+N F P R++H FG ED G++ V+
Sbjct: 637 DSNADQFGP----HRISHFFFGAGNKEDEGSSPVTVADVL 672
>M.Javanica_Scaff329g004964 on XP_807448 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 831
Score = 23.9 bits (50), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 4/38 (10%)
Query: 20 NNSNFWPPNIDERVAHLDFGTSTMEDVGNTSALFGSVM 57
N F P R++H FG ED GN+ V+
Sbjct: 642 NTDQFGP----HRISHFFFGAGNKEDEGNSHVTVADVL 675
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6222g042987
(137 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_810676 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.80
XP_827755 VSG (Establishment) [Trypanosoma brucei] 26 0.83
XP_001348015 AMA-1 (Invasion) [Plasmodium falciparum] 23 6.2
>M.Javanica_Scaff6222g042987 on XP_810676 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1040
Score = 26.2 bits (56), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 19/27 (70%)
Query: 96 LTDNSKSSQDSSSYSYPYNSYYKNYWP 122
L+D S++ ++SSS+S P S +N+ P
Sbjct: 887 LSDASENMEESSSHSAPLTSDEQNFGP 913
>M.Javanica_Scaff6222g042987 on XP_827755 VSG (Establishment) [Trypanosoma brucei]
Length = 510
Score = 26.2 bits (56), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 108 SYSYPYNSYYKNYWPYYYYYNTGSDN 133
S S+ +Y +N WP ++ + +DN
Sbjct: 333 SGSHAIRTYVRNCWPAFHNIDDPTDN 358
>M.Javanica_Scaff6222g042987 on XP_001348015 AMA-1 (Invasion) [Plasmodium falciparum]
Length = 622
Score = 23.5 bits (49), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 25/65 (38%), Gaps = 8/65 (12%)
Query: 8 KISTVMLLSILSLVLLVDLSYGEYNWSN--------YPYNYYYYNPYSYNYYRPSETKQS 59
K+ V+LLS +++ G+ W + P N + +P Y Y E
Sbjct: 3 KLYCVLLLSAFEFTYMINFGRGQNYWEHPYQNSDVYRPINEHREHPKEYEYPLHQEHTYQ 62
Query: 60 SSDSG 64
DSG
Sbjct: 63 QEDSG 67
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2697g024657
(51 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3691g030616
(341 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_807986 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.2
>M.Javanica_Scaff3691g030616 on XP_807986 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1054
Score = 26.9 bits (58), Expect = 2.2, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 7/61 (11%)
Query: 64 GADEKHVSNNNTENENNKQKLLETNNMLGKEEKTETLIDWLAQMETELPKLFTQSKQSGQ 123
G D KH S + TN ML EE +E +D L + +P L + + +GQ
Sbjct: 681 GGDSKHQSATGGH-------VTVTNVMLYNEELSEDDLDELPDSKVTIPSLGVEKQSTGQ 733
Query: 124 L 124
+
Sbjct: 734 V 734
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2733g024881
(81 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAA30187 ESAG-6 (Establishment) [Trypanosoma brucei] 23 2.8
XP_816853 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 8.6
XP_819737 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 9.5
>M.Javanica_Scaff2733g024881 on AAA30187 ESAG-6 (Establishment) [Trypanosoma brucei]
Length = 400
Score = 23.1 bits (48), Expect = 2.8, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 28 SIRGCHSTGGCHSIRGNTLTVIRPHTKCHPNLT 60
+IRG + GC+ +R +T +++ + NLT
Sbjct: 206 NIRGGNGRDGCNLVRTDTNGILKGGSPTRHNLT 238
>M.Javanica_Scaff2733g024881 on XP_816853 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1044
Score = 21.6 bits (44), Expect = 8.6, Method: Composition-based stats.
Identities = 9/23 (39%), Positives = 12/23 (52%), Gaps = 3/23 (13%)
Query: 31 GCHSTGGCHSIRGNTLTVIRPHT 53
GC GG H++ N+ I P T
Sbjct: 59 GC---GGAHAVENNSSIAINPFT 78
>M.Javanica_Scaff2733g024881 on XP_819737 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1112
Score = 21.6 bits (44), Expect = 9.5, Method: Composition-based stats.
Identities = 7/22 (31%), Positives = 11/22 (50%)
Query: 32 CHSTGGCHSIRGNTLTVIRPHT 53
C +GG H++ + I P T
Sbjct: 121 CCGSGGAHAVESKSSIAINPFT 142
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3668g030477
(318 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_806299 Trans-sialidase (Invasion) [Trypanosoma cruzi] 31 0.12
XP_001351514 PfEMP1 (Establishment) [Plasmodium falciparum] 26 4.9
XP_001351515 PfEMP1 (Establishment) [Plasmodium falciparum] 25 5.3
XP_001349035 PfEMP1 (Establishment) [Plasmodium falciparum] 25 8.9
>M.Javanica_Scaff3668g030477 on XP_806299 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1047
Score = 30.8 bits (68), Expect = 0.12, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 37/75 (49%)
Query: 172 EELTSQDLADAIETIYNELMLIADTCQSESMYQLIYSPNVLATSSSLVGEDSLSHHNDRS 231
EELT D + E I N+L+L A + ++++ + S ++ + ED+ H ++
Sbjct: 751 EELTEDDTDEQEEGIVNDLLLAASSSKADAGSSVPESATAAQSAENSHQEDNAQFHQGKT 810
Query: 232 IGVYIIDRYAYNMQQ 246
+ ++ +MQ+
Sbjct: 811 AQQFTLNEAKESMQR 825
>M.Javanica_Scaff3668g030477 on XP_001351514 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2201
Score = 25.8 bits (55), Expect = 4.9, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Query: 222 DSLSHHNDRS--IGVYIIDRYAYNMQQFLDEKVLALESNSSL 261
D ++ +N ++ I V++IDR A ++++L+ + ESN+SL
Sbjct: 1387 DKIAKNNGKTTTIDVHMIDRRAPFIKKYLENSKNSEESNNSL 1428
>M.Javanica_Scaff3668g030477 on XP_001351515 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2181
Score = 25.4 bits (54), Expect = 5.3, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Query: 222 DSLSHHNDRS--IGVYIIDRYAYNMQQFLDEKVLALESNSSL 261
D ++ +N ++ I V++IDR A ++++L+ + ESN+SL
Sbjct: 1367 DKIAKNNGKTTTIDVHMIDRRAPFIKKYLENSKNSEESNNSL 1408
>M.Javanica_Scaff3668g030477 on XP_001349035 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2239
Score = 24.6 bits (52), Expect = 8.9, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 29/77 (37%), Gaps = 8/77 (10%)
Query: 40 NNWAVLVCSSRFWFNYRHVSNVLSLYKSLKRLGMPDSNIILMLADNIPCNARNPSPAAIY 99
NN L W N H ++ S G+P N +L +I + NP P +
Sbjct: 2068 NNHERLPKLKELWENETHSGDINS--------GIPSGNHVLNTDVSIQIHMDNPKPKNEF 2119
Query: 100 NNAHSHQNLFLEDTEVD 116
N + N DT +D
Sbjct: 2120 KNMDTTPNKSTMDTMLD 2136
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff574g007756
(402 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_821390 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.9
XP_816181 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 3.8
XP_829789 VSG (Establishment) [Trypanosoma brucei] 26 5.8
>M.Javanica_Scaff574g007756 on XP_821390 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 940
Score = 26.6 bits (57), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 161 KKKKSTGSNGNPTTATSTISCNNTNSIPSKNQNSSKTSTCSMQNIEQLSTSLNGR 215
KK K GS G T+A S+ + + + S+NQ++S TS N++ S+S G+
Sbjct: 768 KKSKDAGSGGLSTSAVSS-ATTSPAAKESENQSASGTSPEGHSNVDVDSSSEGGQ 821
>M.Javanica_Scaff574g007756 on XP_816181 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 967
Score = 26.2 bits (56), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 161 KKKKSTGSNGNPTTATSTISCNNTNSIPSKNQNSSKTSTCSMQNIEQLSTSLNGR 215
KK K GS G T+A S+ + + + S+NQ++S TS+ N++ S S G+
Sbjct: 794 KKSKDAGSGGLSTSAVSS-ATTSPAAKESENQSASGTSSEGHSNVDVDSLSEGGQ 847
>M.Javanica_Scaff574g007756 on XP_829789 VSG (Establishment) [Trypanosoma brucei]
Length = 526
Score = 25.8 bits (55), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 164 KSTGSNGNPTTATSTISC 181
K+ G NGNP TA ++C
Sbjct: 211 KAAGGNGNPATALEALTC 228
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6344g043521
(676 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351221 CTRP (Adhesin) [Plasmodium falciparum] 38 0.002
XP_808396 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 4.8
XP_809996 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 7.6
ABA06465 MSA-2c (Invasion) [Babesia bovis] 26 7.8
ABA06476 MSA-2a2 (Invasion) [Babesia bovis] 26 7.8
ABA06464 MSA-2c (Invasion) [Babesia bovis] 26 8.0
AAL15420 MSA-2c (Invasion) [Babesia bovis] 26 8.4
>M.Javanica_Scaff6344g043521 on XP_001351221 CTRP (Adhesin) [Plasmodium falciparum]
Length = 2112
Score = 37.7 bits (86), Expect = 0.002, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 7/46 (15%)
Query: 86 NPKPRSKP--KQKTAPVQEPAPSQ-PAPVQ----QQSPDPVQPPQP 124
NP+P KP ++ PV++P P + P PV+ +++P+PV+ P+P
Sbjct: 505 NPEPVEKPNPEENPNPVEKPTPEENPNPVEKPTPEENPNPVEKPEP 550
Score = 34.7 bits (78), Expect = 0.023, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 13/54 (24%)
Query: 87 PKPRSKPKQKTAPVQEPAPSQ-PAPVQ----QQSPDPVQPP----QPTPWDKKE 131
PKP P+ PV++P P + P PV+ +++P+PV+ P P P +K E
Sbjct: 500 PKPEENPE----PVEKPNPEENPNPVEKPTPEENPNPVEKPTPEENPNPVEKPE 549
>M.Javanica_Scaff6344g043521 on XP_808396 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 786
Score = 26.9 bits (58), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 87 PKPRSKPKQKTAPVQEPAPSQPAPVQQQSPDPVQPPQPTPWDKKELVEHVIAAYKNSCKS 146
P P+ P+ + V + S + ++ S P P + +E+ E AA KN+ ++
Sbjct: 694 PVPKRAPESQAGGVPQTIASAVSGPEKNSAAPAVPMKLDSHAVEEVSEGG-AAKKNTSRT 752
Query: 147 SDIVIFSPE 155
D+ F PE
Sbjct: 753 EDVQFFVPE 761
>M.Javanica_Scaff6344g043521 on XP_809996 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 787
Score = 26.2 bits (56), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 87 PKPRSKPKQKTAPVQEPAPSQPAPVQQQSPDPVQPPQPTPWDKKELVEHVIAAYKNSCKS 146
P P+ P+ + V + S + ++ S P P + +E+ E AA KN+ ++
Sbjct: 695 PVPKRAPESQAGGVPQTIASAVSGPEKNSAAPAVPMKLDSHAVEEVSEGG-AAKKNTSRT 753
Query: 147 SDIVIFSPE 155
D+ F PE
Sbjct: 754 EDVQFFVPE 762
>M.Javanica_Scaff6344g043521 on ABA06465 MSA-2c (Invasion) [Babesia bovis]
Length = 265
Score = 25.8 bits (55), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 97 TAPVQEPAPSQPAPVQQQSPDPVQPPQPT 125
T+ + P+PS Q P P + P+PT
Sbjct: 215 TSEAETPSPSSGENTAAQPPKPAETPKPT 243
>M.Javanica_Scaff6344g043521 on ABA06476 MSA-2a2 (Invasion) [Babesia bovis]
Length = 265
Score = 25.8 bits (55), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 97 TAPVQEPAPSQPAPVQQQSPDPVQPPQPT 125
T+ + P+PS Q P P + P+PT
Sbjct: 215 TSEAETPSPSSGENTAAQPPKPAETPKPT 243
>M.Javanica_Scaff6344g043521 on ABA06464 MSA-2c (Invasion) [Babesia bovis]
Length = 265
Score = 25.8 bits (55), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 97 TAPVQEPAPSQPAPVQQQSPDPVQPPQPT 125
T+ + P+PS Q P P + P+PT
Sbjct: 215 TSEAETPSPSSGENTAAQPPKPAETPKPT 243
>M.Javanica_Scaff6344g043521 on AAL15420 MSA-2c (Invasion) [Babesia bovis]
Length = 265
Score = 25.8 bits (55), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 97 TAPVQEPAPSQPAPVQQQSPDPVQPPQPT 125
T+ + P+PS Q P P + P+PT
Sbjct: 215 TSEAETPSPSSGENTAAQPPKPAETPKPT 243
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff31276g098498
(192 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_818193 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.6
>M.Javanica_Scaff31276g098498 on XP_818193 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 838
Score = 24.3 bits (51), Expect = 5.6, Method: Composition-based stats.
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 3 HNWGVSVIFVTQSLYGRDI 21
H WGV F+T ++ RD+
Sbjct: 423 HEWGVGSGFITATIDNRDV 441
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff28g000666
(122 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_817865 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.4
XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum] 25 1.7
XP_001609751 variant erythrocyte surface antigen-1, alpha subun... 23 7.9
>M.Javanica_Scaff28g000666 on XP_817865 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 786
Score = 25.0 bits (53), Expect = 1.4, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 50 DGESSEEIIMPKASGGASRGEESHKALYSK 79
DG+++ ++ K++G + G+E ALY K
Sbjct: 423 DGDAAASSLLYKSAGSGNNGKEELIALYEK 452
>M.Javanica_Scaff28g000666 on XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1711
Score = 25.0 bits (53), Expect = 1.7, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 59 MPKASGGASRGEESHKALYSKIAFKTY 85
M SGG S +ES K L+ +I K Y
Sbjct: 1 MATGSGGDSSRDESVKDLFDRIGKKVY 27
>M.Javanica_Scaff28g000666 on XP_001609751 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1298
Score = 22.7 bits (47), Expect = 7.9, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 35 FGYAPPSEEEYYTAEDGESSEEIIMPKASGGASRGEE 71
F Y P E Y +DG++ + + KA GG R E
Sbjct: 1154 FSYGNPFNLEGYQQKDGKTDGQYDIVKA-GGTKRCHE 1189
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff30680g097800
(81 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAF14193 SBP3 (Others) [Babesia bovis] 23 2.8
XP_805084 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.2
XP_001610496 variant erythrocyte surface antigen-1, beta subuni... 22 4.7
XP_001611898 variant erythrocyte surface antigen-1, beta subuni... 22 5.9
>M.Javanica_Scaff30680g097800 on AAF14193 SBP3 (Others) [Babesia bovis]
Length = 1089
Score = 23.1 bits (48), Expect = 2.8, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Query: 39 GKNPLQQPKTKEENSKDSTH-PLDCKCDACKEAAAKN 74
GKN P +E + H P CKC + AA KN
Sbjct: 635 GKN---LPHDRECSGSTECHCPCKCKCTCNQTAAEKN 668
>M.Javanica_Scaff30680g097800 on XP_805084 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 828
Score = 22.7 bits (47), Expect = 3.2, Method: Composition-based stats.
Identities = 10/17 (58%), Positives = 11/17 (64%)
Query: 12 IFLILINFGSTRSPPLQ 28
IFL+L NF S PLQ
Sbjct: 151 IFLLLSNFTEQSSVPLQ 167
>M.Javanica_Scaff30680g097800 on XP_001610496 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1159
Score = 22.3 bits (46), Expect = 4.7, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 12/26 (46%)
Query: 47 KTKEENSKDSTHPLDCKCDACKEAAA 72
+T E KD +DCK D C A
Sbjct: 960 RTGLEGLKDDYMKVDCKGDGCTGKAG 985
>M.Javanica_Scaff30680g097800 on XP_001611898 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1214
Score = 21.9 bits (45), Expect = 5.9, Method: Composition-based stats.
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 47 KTKEENSKDSTHPLDCKCDACKEAAA 72
KT E +++ + CK D CK A
Sbjct: 964 KTGLEGLEEAFREISCKVDGCKNGRA 989
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff29450g096349
(50 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_806401 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 0.92
AAL38220 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 1.1
>M.Javanica_Scaff29450g096349 on XP_806401 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 863
Score = 23.1 bits (48), Expect = 0.92, Method: Composition-based stats.
Identities = 9/15 (60%), Positives = 9/15 (60%)
Query: 14 CIFCVGRSAPLIFPF 28
C FCVG IFPF
Sbjct: 8 CTFCVGIFFLYIFPF 22
>M.Javanica_Scaff29450g096349 on AAL38220 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2957
Score = 22.7 bits (47), Expect = 1.1, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 25 IFPFLSFSSQYNMFSCSYLQNKNTSN 50
I F+S Q F Y+ NKNT N
Sbjct: 347 ISSFISTQKQLYYFEYIYIMNKNTLN 372
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff26108g091895
(281 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_828101 VSG (Establishment) [Trypanosoma brucei] 27 1.9
AAK94670 SUB1 (Protease) [Toxoplasma gondii] 26 2.5
AAK07772 MSA-1 (Invasion) [Babesia bovis] 25 3.8
AAK07771 MSA-1 (Invasion) [Babesia bovis] 25 3.8
>M.Javanica_Scaff26108g091895 on XP_828101 VSG (Establishment) [Trypanosoma brucei]
Length = 487
Score = 26.6 bits (57), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 23/49 (46%)
Query: 181 NSIKLERLLLTNILKGAAQALQQFHQHGFHLDVHKENFLIALDENQSEP 229
N LE ++ N+ A + LQ F ++ DVHK EN+ EP
Sbjct: 59 NDADLEDIMRLNMSLSAPEWLQMFVKNAADNDVHKTQPETVNKENKWEP 107
>M.Javanica_Scaff26108g091895 on AAK94670 SUB1 (Protease) [Toxoplasma gondii]
Length = 255
Score = 25.8 bits (55), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/72 (20%), Positives = 31/72 (43%), Gaps = 19/72 (26%)
Query: 210 HLDVHKENFLIALDENQSEPNPDPVSNETIPVKLIDFN----ISVIYSKGHVAHFDHMIK 265
H+DV +E+ ++ +D +P + D I ++G + DH+++
Sbjct: 165 HVDVLRESGVVLVD---------------LPAQTTDKQLQELIETARAQGTIVEPDHLVQ 209
Query: 266 SINAPEIADNNP 277
S+N N+P
Sbjct: 210 SVNTSSKGSNDP 221
>M.Javanica_Scaff26108g091895 on AAK07772 MSA-1 (Invasion) [Babesia bovis]
Length = 339
Score = 25.4 bits (54), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 155 LLELGGKTLNDYFYQKVRERHGNFDINSI 183
L E K DYF Q V++ N D+NS+
Sbjct: 160 LTEEDRKKAEDYFKQHVQKTETNVDVNSM 188
>M.Javanica_Scaff26108g091895 on AAK07771 MSA-1 (Invasion) [Babesia bovis]
Length = 334
Score = 25.4 bits (54), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 155 LLELGGKTLNDYFYQKVRERHGNFDINSI 183
L E K DYF Q V++ N D+NS+
Sbjct: 160 LTEEDRKKAEDYFKQHVQKTETNVDVNSM 188
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff52g001114
(902 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAG32024 MIC10 (Others) [Toxoplasma gondii] 28 2.0
XP_814930 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 3.0
XP_001350409 PfEMP1 (Establishment) [Plasmodium falciparum] 28 3.0
XP_807804 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 4.5
XP_812154 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 7.8
XP_803651 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 8.8
>M.Javanica_Scaff52g001114 on AAG32024 MIC10 (Others) [Toxoplasma gondii]
Length = 198
Score = 27.7 bits (60), Expect = 2.0, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 63/125 (50%), Gaps = 14/125 (11%)
Query: 780 QKKNKDLKSEEPPEDIDKETRNVKLELGEKNLIENPKIENDKQKLVLDHEKEEWQEASSK 839
+K++++L+++ P E++++ R EL K E KQ+ V+ QE
Sbjct: 71 RKRHEELQNQSP-EEVEEAKRKYHEELRRK--AEEDAETKRKQEAVI-------QELKEV 120
Query: 840 KKKKGKKR--NKNKKIISDIEENLEDKKKETRIIESDGSLEEQYLNKLKINEENIPLIQS 897
KK+G + + +K I + + N E +++E R + D ++EE+ + + K ++E L +
Sbjct: 121 AKKRGLREAAEREEKRIDEQQANYEQRQQELR--DMDSAMEERLMQQRKKDQEERELARK 178
Query: 898 ADLKV 902
KV
Sbjct: 179 NSDKV 183
>M.Javanica_Scaff52g001114 on XP_814930 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 938
Score = 28.1 bits (61), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 9/105 (8%)
Query: 801 NVKLELGEKNLIENPKIENDKQKLVLDHE-------KEEWQEASSKKKKKGKKRNKNKKI 853
N L +GE +I+ ++E+ K+K D E E+ +E+ + KKG +++KK
Sbjct: 747 NRPLSVGELKMIK--EVEDKKEKGSGDSEDKKESGDSEDKKESGDSEDKKGSGDSEDKKE 804
Query: 854 ISDIEENLEDKKKETRIIESDGSLEEQYLNKLKINEENIPLIQSA 898
D E+ E E + DG+ N E + QSA
Sbjct: 805 SGDSEDKKESGDSEDKKGSGDGAFTPAVSNATTHTAEEETVNQSA 849
>M.Javanica_Scaff52g001114 on XP_001350409 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2223
Score = 28.1 bits (61), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 32/78 (41%), Gaps = 11/78 (14%)
Query: 201 GHYDDKKMLK----------TLELLDRYASCVAKWNKKNIITITGPISVHSDVSEKIEK- 249
G +DD K L+ T L DRY N ++ IT P+S D K++K
Sbjct: 1017 GEFDDDKSLRDWFVKSAAVETFFLWDRYKKENKTQNTSQLLPITAPVSNSDDPQSKLQKS 1076
Query: 250 GRIVKSYPSIFIYFINNF 267
G I + Y + ++
Sbjct: 1077 GEIPPDFLRQMFYTLGDY 1094
>M.Javanica_Scaff52g001114 on XP_807804 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1054
Score = 27.3 bits (59), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 13 LLFIYVISTIKCASRKDDSVPESTNKPDPGPSTS 46
LL I ST+ AS D+++P+S DP T+
Sbjct: 868 LLPIVAGSTVDEASEMDEAIPQSRTSDDPAQQTT 901
>M.Javanica_Scaff52g001114 on XP_812154 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 175
Score = 25.8 bits (55), Expect = 7.8, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 851 KKIISDIEENLEDKKKETRIIESDGS 876
KK + EE L+D KK+ +++E D S
Sbjct: 129 KKTTKEPEEVLKDAKKDIQVLEKDAS 154
>M.Javanica_Scaff52g001114 on XP_803651 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 238
Score = 26.2 bits (56), Expect = 8.8, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 851 KKIISDIEENLEDKKKETRIIESDGS 876
KK + EE L+D KK+ +++E D S
Sbjct: 129 KKTTKEPEEVLKDAKKDIQVLEKDAS 154
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3239g027996
(170 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001611900 variant erythrocyte surface antigen-1, alpha subun... 25 2.0
XP_001610713 variant erythrocyte surface antigen-1, alpha subun... 25 4.3
XP_820181 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 6.9
>M.Javanica_Scaff3239g027996 on XP_001611900 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1226
Score = 25.4 bits (54), Expect = 2.0, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 73 IELGDEQEQLLECTENILTWLERIMRYVKNVLNGKE 108
++LG+ QE L + ++ ++R + KN L+GKE
Sbjct: 700 VQLGNAQEALEGKDKGVIEKVKRALGTAKNGLDGKE 735
>M.Javanica_Scaff3239g027996 on XP_001610713 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1294
Score = 24.6 bits (52), Expect = 4.3, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 7/75 (9%)
Query: 54 GEAVALNFITRGIDSERREIELGDEQEQL-------LECTENILTWLERIMRYVKNVLNG 106
GE+VA+ T ++LG+ QE L +E + L +R + KN LNG
Sbjct: 636 GESVAMKVKTLLEKIGEVVVQLGNAQEALEGKKKEAIEGVKGALGEAKRELEGAKNGLNG 695
Query: 107 KEENPNPEVGRKLME 121
K E + KL +
Sbjct: 696 KLEEAKDGLKDKLQD 710
>M.Javanica_Scaff3239g027996 on XP_820181 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 648
Score = 23.9 bits (50), Expect = 6.9, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 20/45 (44%)
Query: 50 DAFLGEAVALNFITRGIDSERREIELGDEQEQLLECTENILTWLE 94
+A L AL+ GI RR I L + E+L + TW +
Sbjct: 395 NALLYSDGALHLSREGIVGTRRGISLARQTEELKTINSVLSTWAQ 439
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff25295g090692
(108 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAW78133 TRAP (Invasion) [Plasmodium falciparum] 24 1.8
AAW78158 TRAP (Invasion) [Plasmodium falciparum] 24 2.1
AAW78141 TRAP (Invasion) [Plasmodium falciparum] 24 2.2
AAW78161 TRAP (Invasion) [Plasmodium falciparum] 24 2.5
AAW78165 TRAP (Invasion) [Plasmodium falciparum] 24 2.5
AAW78168 TRAP (Invasion) [Plasmodium falciparum] 24 2.6
AAW78146 TRAP (Invasion) [Plasmodium falciparum] 24 2.7
AAW78147 TRAP (Invasion) [Plasmodium falciparum] 24 2.7
AAW78159 TRAP (Invasion) [Plasmodium falciparum] 24 2.7
AAW78174 TRAP (Invasion) [Plasmodium falciparum] 24 2.7
AAW78148 TRAP (Invasion) [Plasmodium falciparum] 24 2.7
AAW78167 TRAP (Invasion) [Plasmodium falciparum] 23 3.4
AAW78150 TRAP (Invasion) [Plasmodium falciparum] 23 3.9
AAW78156 TRAP (Invasion) [Plasmodium falciparum] 23 3.9
AAA29775 TRAP (Invasion) [Plasmodium falciparum] 23 4.3
AAA29776 TRAP (Invasion) [Plasmodium falciparum] 23 4.7
AAA29774 TRAP (Invasion) [Plasmodium falciparum] 23 4.8
AAQ11894 TRAP (Invasion) [Plasmodium falciparum] 23 4.9
AAQ11895 TRAP (Invasion) [Plasmodium falciparum] 23 5.1
AAW78163 TRAP (Invasion) [Plasmodium falciparum] 23 6.2
AAW78157 TRAP (Invasion) [Plasmodium falciparum] 23 6.3
AAW78130 TRAP (Invasion) [Plasmodium falciparum] 23 6.4
AAW78177 TRAP (Invasion) [Plasmodium falciparum] 23 6.6
AAW78153 TRAP (Invasion) [Plasmodium falciparum] 23 6.6
AAW78164 TRAP (Invasion) [Plasmodium falciparum] 23 6.7
AAW78149 TRAP (Invasion) [Plasmodium falciparum] 23 7.1
AAW78144 TRAP (Invasion) [Plasmodium falciparum] 23 7.2
AAW78152 TRAP (Invasion) [Plasmodium falciparum] 22 7.9
AAW78172 TRAP (Invasion) [Plasmodium falciparum] 22 8.0
AAW78131 TRAP (Invasion) [Plasmodium falciparum] 22 8.5
AAW78171 TRAP (Invasion) [Plasmodium falciparum] 22 8.6
AAA29770 TRAP (Invasion) [Plasmodium falciparum] 22 8.6
AAW78134 TRAP (Invasion) [Plasmodium falciparum] 22 8.6
AAA29771 TRAP (Invasion) [Plasmodium falciparum] 22 8.8
AAA29777 TRAP (Invasion) [Plasmodium falciparum] 22 8.8
XP_001351435 PfEMP1 (Establishment) [Plasmodium falciparum] 22 8.9
AAA29773 TRAP (Invasion) [Plasmodium falciparum] 22 9.1
XP_815479 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 9.7
AAW78169 TRAP (Invasion) [Plasmodium falciparum] 22 9.8
>M.Javanica_Scaff25295g090692 on AAW78133 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 24.3 bits (51), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 29 TPQVIEDNECDNVYNNDYGEESEEEDELELQEETENEQDNQQFVPLEEFVINQGILDPSE 88
P + ED+E + + E + E+ ++ ++ EN+ DNQ +P ++ P
Sbjct: 361 KPNIPEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPNDK----SDRYIPYS 416
Query: 89 PASPLFSTNEHTSEDTTS 106
P SP NE D S
Sbjct: 417 PLSPKVLDNERKQSDPQS 434
>M.Javanica_Scaff25295g090692 on AAW78158 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 24.3 bits (51), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 29 TPQVIEDNECDNVYNNDYGEESEEEDELELQEETENEQDNQQFVPLEEFVINQGILDPSE 88
P + ED+E + + E + E+ ++ ++ EN+ DNQ +P ++ N P
Sbjct: 364 KPNIPEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPNDKSDRNI----PYS 419
Query: 89 PASPLFSTNEHTSEDTTS 106
P P NE D S
Sbjct: 420 PLPPKVLDNERKQSDPQS 437
>M.Javanica_Scaff25295g090692 on AAW78141 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 24.3 bits (51), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 29 TPQVIEDNECDNVYNNDYGEESEEEDELELQEETENEQDNQQFVPLEEFVINQGILDPSE 88
P + ED+E + + E + E+ ++ ++ EN+ DNQ +P ++ N P
Sbjct: 367 KPNIPEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPNDKSDRNI----PYS 422
Query: 89 PASPLFSTNEHTSEDTTS 106
P P NE D S
Sbjct: 423 PLPPKVLDNERKQSDPQS 440
>M.Javanica_Scaff25295g090692 on AAW78161 TRAP (Invasion) [Plasmodium falciparum]
Length = 554
Score = 23.9 bits (50), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 29 TPQVIEDNECDNVYNNDYGEESEEEDELELQEETENEQDNQQFVPLEEFVINQGILDPSE 88
P + ED+E + + E + E+ ++ ++ EN+ DNQ +P ++ N P
Sbjct: 376 KPNIPEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPNDKSDRNI----PYS 431
Query: 89 PASPLFSTNEHTSEDTTS 106
P P NE D S
Sbjct: 432 PLPPKVLDNERKQSDPQS 449
>M.Javanica_Scaff25295g090692 on AAW78165 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 23.9 bits (50), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 30 PQVIEDNECDNVYNNDYGEESEEEDELELQEETENEQDNQQFVPLEEFVINQGILDPSEP 89
P + ED+E + + E + E+ ++ ++ EN+ DNQ +P ++ N P P
Sbjct: 362 PNIPEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPNDKSDRNI----PYSP 417
Query: 90 ASPLFSTNEHTSEDTTS 106
P NE D S
Sbjct: 418 LPPKVLDNERKQSDPQS 434
>M.Javanica_Scaff25295g090692 on AAW78168 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 23.9 bits (50), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 29 TPQVIEDNECDNVYNNDYGEESEEEDELELQEETENEQDNQQFVPLEEFVINQGILDPSE 88
P + ED+E + + E + E+ ++ ++ EN+ DNQ +P ++ N P
Sbjct: 361 KPNIPEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPNDKSDRNI----PYS 416
Query: 89 PASPLFSTNEHTSEDTTS 106
P P NE D S
Sbjct: 417 PLPPKVLDNERKQSDPQS 434
>M.Javanica_Scaff25295g090692 on AAW78146 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 23.9 bits (50), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 29 TPQVIEDNECDNVYNNDYGEESEEEDELELQEETENEQDNQQFVPLEEFVINQGILDPSE 88
P + ED+E + + E + E+ ++ ++ EN+ DNQ +P ++ N P
Sbjct: 361 KPNIPEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPNDKSDRNI----PYS 416
Query: 89 PASPLFSTNEHTSEDTTS 106
P P NE D S
Sbjct: 417 PLPPKVLDNERKQSDPQS 434
>M.Javanica_Scaff25295g090692 on AAW78147 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 23.9 bits (50), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 29 TPQVIEDNECDNVYNNDYGEESEEEDELELQEETENEQDNQQFVPLEEFVINQGILDPSE 88
P + ED+E + + E + E+ ++ ++ EN+ DNQ +P ++ N P
Sbjct: 361 KPNIPEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPNDKSDRNI----PYS 416
Query: 89 PASPLFSTNEHTSEDTTS 106
P P NE D S
Sbjct: 417 PLPPKVLDNERKQSDPQS 434
>M.Javanica_Scaff25295g090692 on AAW78159 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 23.9 bits (50), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 30 PQVIEDNECDNVYNNDYGEESEEEDELELQEETENEQDNQQFVPLEEFVINQGILDPSEP 89
P + ED+E + + E + E+ ++ ++ EN+ DNQ +P ++ N P P
Sbjct: 362 PNIPEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPNDKSDRNI----PYSP 417
Query: 90 ASPLFSTNEHTSEDTTS 106
P NE D S
Sbjct: 418 LPPKVLDNERKQSDPQS 434
>M.Javanica_Scaff25295g090692 on AAW78174 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 23.9 bits (50), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 29 TPQVIEDNECDNVYNNDYGEESEEEDELELQEETENEQDNQQFVPLEEFVINQGILDPSE 88
P + ED+E + + E + E+ ++ ++ EN+ DNQ +P ++ N P
Sbjct: 361 KPNIPEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPNDKSDRNI----PYS 416
Query: 89 PASPLFSTNEHTSEDTTS 106
P P NE D S
Sbjct: 417 PLPPKVLDNERKQSDPQS 434
>M.Javanica_Scaff25295g090692 on AAW78148 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 23.9 bits (50), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 30 PQVIEDNECDNVYNNDYGEESEEEDELELQEETENEQDNQQFVPLEEFVINQGILDPSEP 89
P + ED+E + + E + E+ ++ ++ EN+ DNQ +P ++ N P P
Sbjct: 362 PNIPEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPNDKSDRNI----PYSP 417
Query: 90 ASPLFSTNEHTSEDTTS 106
P NE D S
Sbjct: 418 LPPKVLDNERKQSDPQS 434
>M.Javanica_Scaff25295g090692 on AAW78167 TRAP (Invasion) [Plasmodium falciparum]
Length = 575
Score = 23.5 bits (49), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 29 TPQVIEDNECDNVYNNDYGEESEEEDELELQEETENEQDNQQFVPLEEFVINQGILDPSE 88
P + ED+E + + E + E+ ++ ++ EN+ DNQ +P ++ N P
Sbjct: 397 KPNIPEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPNDKSDRNI----PYS 452
Query: 89 PASPLFSTNEHTSEDTTS 106
P P NE D S
Sbjct: 453 PLPPKVLDNERKQSDPQS 470
>M.Javanica_Scaff25295g090692 on AAW78150 TRAP (Invasion) [Plasmodium falciparum]
Length = 569
Score = 23.5 bits (49), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 29 TPQVIEDNECDNVYNNDYGEESEEEDELELQEETENEQDNQQFVPLEEFVINQGILDPSE 88
P + ED+E + + E + E+ ++ ++ EN+ DNQ +P ++ N P
Sbjct: 391 KPNIPEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPNDKSDRNI----PYS 446
Query: 89 PASPLFSTNEHTSEDTTS 106
P P NE D S
Sbjct: 447 PLPPNVLDNERKQSDPQS 464
>M.Javanica_Scaff25295g090692 on AAW78156 TRAP (Invasion) [Plasmodium falciparum]
Length = 581
Score = 23.5 bits (49), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 29 TPQVIEDNECDNVYNNDYGEESEEEDELELQEETENEQDNQQFVPLEEFVINQGILDPSE 88
P + ED+E + + E + E+ ++ ++ EN+ DNQ +P ++ N P
Sbjct: 403 KPNIPEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPNDKSDRNI----PYS 458
Query: 89 PASPLFSTNEHTSEDTTS 106
P P NE D S
Sbjct: 459 PLPPKVLDNERKQSDPQS 476
>M.Javanica_Scaff25295g090692 on AAA29775 TRAP (Invasion) [Plasmodium falciparum]
Length = 574
Score = 23.1 bits (48), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 30 PQVIEDNECDNVYNNDYGEESEEEDELELQEETENEQDNQQFVPLEEFVINQGILDPSEP 89
P + ED+E + + E + E+ ++ ++ EN+ DNQ +P ++ P P
Sbjct: 377 PNIPEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPNDK----SDRYIPYSP 432
Query: 90 ASPLFSTNEHTSEDTTS 106
+P NE D S
Sbjct: 433 LAPKVLDNERKQSDPQS 449
>M.Javanica_Scaff25295g090692 on AAA29776 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 23.1 bits (48), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 30 PQVIEDNECDNVYNNDYGEESEEEDELELQEETENEQDNQQFVPLEEFVINQGILDPSEP 89
P + ED+E + + E + E+ ++ ++ EN+ DNQ +P ++ ++ I P P
Sbjct: 362 PNIPEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPNDKS--DRSI--PYSP 417
Query: 90 ASPLFSTNEHTSEDTTS 106
P NE D S
Sbjct: 418 LPPKVLDNERKQSDPQS 434
>M.Javanica_Scaff25295g090692 on AAA29774 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 23.1 bits (48), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 30 PQVIEDNECDNVYNNDYGEESEEEDELELQEETENEQDNQQFVPLEEFVINQGILDPSEP 89
P + ED+E + + E + E+ ++ ++ EN+ DNQ +P ++ ++ I P P
Sbjct: 362 PNIPEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPNDKS--DRSI--PYSP 417
Query: 90 ASPLFSTNEHTSEDTTS 106
P NE D S
Sbjct: 418 LPPKVLDNERKQSDPQS 434
>M.Javanica_Scaff25295g090692 on AAQ11894 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 23.1 bits (48), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 30 PQVIEDNECDNVYNNDYGEESEEEDELELQEETENEQDNQQFVPLEEFVINQGILDPSEP 89
P + ED+E + + E + E+ ++ ++ EN+ DNQ +P ++ ++ I P P
Sbjct: 362 PNIPEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPNDKS--DRSI--PYSP 417
Query: 90 ASPLFSTNEHTSEDTTS 106
P NE D S
Sbjct: 418 LPPKVLDNERKQSDPQS 434
>M.Javanica_Scaff25295g090692 on AAQ11895 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 23.1 bits (48), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 30 PQVIEDNECDNVYNNDYGEESEEEDELELQEETENEQDNQQFVPLEEFVINQGILDPSEP 89
P + ED+E + + E + E+ ++ ++ EN+ DNQ +P ++ ++ I P P
Sbjct: 362 PNIPEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPNDKS--DRSI--PYSP 417
Query: 90 ASPLFSTNEHTSEDTTS 106
P NE D S
Sbjct: 418 LPPKVLDNERKQSDPQS 434
>M.Javanica_Scaff25295g090692 on AAW78163 TRAP (Invasion) [Plasmodium falciparum]
Length = 565
Score = 22.7 bits (47), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Query: 30 PQVIEDNECDNVYNNDYGEESEEEDELELQEETENEQDNQQFVPLEEFVINQGILDPSEP 89
P + ED+E + + E + E+ ++ ++ EN+ DNQ +P ++ P P
Sbjct: 388 PNIPEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPNDK----SDRYIPYSP 443
Query: 90 ASPLFSTNEHTSEDTTS 106
P NE D S
Sbjct: 444 LPPKVLDNERKQSDPQS 460
>M.Javanica_Scaff25295g090692 on AAW78157 TRAP (Invasion) [Plasmodium falciparum]
Length = 557
Score = 22.7 bits (47), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 29 TPQVIEDNECDNVYNNDYGEESEEEDELELQEETENEQDNQQFVPLEEFVINQGILDPSE 88
P + ED+E + + E + E+ ++ ++ EN+ DNQ +P ++ P
Sbjct: 379 KPNIPEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPNDK----SDRYIPYS 434
Query: 89 PASPLFSTNEHTSEDTTS 106
P P NE D S
Sbjct: 435 PLPPKVLDNERKQSDPQS 452
>M.Javanica_Scaff25295g090692 on AAW78130 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 22.7 bits (47), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Query: 30 PQVIEDNECDNVYNNDYGEESEEEDELELQEETENEQDNQQFVPLEEFVINQGILDPSEP 89
P + ED+E + + E + E+ ++ ++ EN+ DNQ +P ++ P P
Sbjct: 362 PNIPEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPNDK----SDRYIPYSP 417
Query: 90 ASPLFSTNEHTSEDTTS 106
P NE D S
Sbjct: 418 LPPKVLDNERKQSDPQS 434
>M.Javanica_Scaff25295g090692 on AAW78177 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 22.7 bits (47), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 10/80 (12%)
Query: 30 PQVIEDNECDNVYNNDYGEESEEEDELELQEETENEQDNQQFVP---LEEFVINQGILDP 86
P + ED+E + + E + E+ ++ ++ EN+ DNQ +P E ++ P
Sbjct: 362 PNIPEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPNDKSERYI-------P 414
Query: 87 SEPASPLFSTNEHTSEDTTS 106
P P NE D S
Sbjct: 415 YSPLPPNVLDNERKQSDPQS 434
>M.Javanica_Scaff25295g090692 on AAW78153 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 22.7 bits (47), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Query: 30 PQVIEDNECDNVYNNDYGEESEEEDELELQEETENEQDNQQFVPLEEFVINQGILDPSEP 89
P + ED+E + + E + E+ ++ ++ EN+ DNQ +P ++ P P
Sbjct: 368 PNIPEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPNDK----SDRYIPYSP 423
Query: 90 ASPLFSTNEHTSEDTTS 106
P NE D S
Sbjct: 424 LPPKVLDNERKQSDPQS 440
>M.Javanica_Scaff25295g090692 on AAW78164 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 22.7 bits (47), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Query: 30 PQVIEDNECDNVYNNDYGEESEEEDELELQEETENEQDNQQFVPLEEFVINQGILDPSEP 89
P + ED+E + + E + E+ ++ ++ EN+ DNQ +P ++ P P
Sbjct: 362 PNIPEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPNDK----SDRYIPYSP 417
Query: 90 ASPLFSTNEHTSEDTTS 106
P NE D S
Sbjct: 418 LPPKVLDNERKQSDPQS 434
>M.Javanica_Scaff25295g090692 on AAW78149 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 22.7 bits (47), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Query: 30 PQVIEDNECDNVYNNDYGEESEEEDELELQEETENEQDNQQFVPLEEFVINQGILDPSEP 89
P + ED+E + + E + E+ ++ ++ EN+ DNQ +P ++ P P
Sbjct: 365 PNIPEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPNDK----SDRYIPYSP 420
Query: 90 ASPLFSTNEHTSEDTTS 106
P NE D S
Sbjct: 421 LPPKVLDNERKQSDPQS 437
>M.Javanica_Scaff25295g090692 on AAW78144 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 22.7 bits (47), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Query: 30 PQVIEDNECDNVYNNDYGEESEEEDELELQEETENEQDNQQFVPLEEFVINQGILDPSEP 89
P + ED+E + + E + E+ ++ ++ EN+ DNQ +P ++ P P
Sbjct: 365 PNIPEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPNDK----SDRYIPYSP 420
Query: 90 ASPLFSTNEHTSEDTTS 106
P NE D S
Sbjct: 421 LPPKVLDNERKQSDPQS 437
>M.Javanica_Scaff25295g090692 on AAW78152 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 22.3 bits (46), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Query: 30 PQVIEDNECDNVYNNDYGEESEEEDELELQEETENEQDNQQFVPLEEFVINQGILDPSEP 89
P + ED+E + + E + E+ ++ ++ EN+ DNQ +P ++ P P
Sbjct: 365 PNIPEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPNDK----SDRYIPYSP 420
Query: 90 ASPLFSTNEHTSEDTTS 106
P NE D S
Sbjct: 421 LPPKVLDNERKQSDPQS 437
>M.Javanica_Scaff25295g090692 on AAW78172 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 22.3 bits (46), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Query: 30 PQVIEDNECDNVYNNDYGEESEEEDELELQEETENEQDNQQFVPLEEFVINQGILDPSEP 89
P + ED+E + + E + E+ ++ ++ EN+ DNQ +P ++ P P
Sbjct: 368 PNIPEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPNDK----SDRYIPYSP 423
Query: 90 ASPLFSTNEHTSEDTTS 106
P NE D S
Sbjct: 424 LPPKVLDNERKQSDPQS 440
>M.Javanica_Scaff25295g090692 on AAW78131 TRAP (Invasion) [Plasmodium falciparum]
Length = 557
Score = 22.3 bits (46), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Query: 30 PQVIEDNECDNVYNNDYGEESEEEDELELQEETENEQDNQQFVPLEEFVINQGILDPSEP 89
P + ED+E + + E + E+ ++ ++ EN+ DNQ +P ++ P P
Sbjct: 380 PNIPEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPNDK----SDRYIPYSP 435
Query: 90 ASPLFSTNEHTSEDTTS 106
P NE D S
Sbjct: 436 LPPKVLDNERKQSDPQS 452
>M.Javanica_Scaff25295g090692 on AAW78171 TRAP (Invasion) [Plasmodium falciparum]
Length = 551
Score = 22.3 bits (46), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Query: 30 PQVIEDNECDNVYNNDYGEESEEEDELELQEETENEQDNQQFVPLEEFVINQGILDPSEP 89
P + ED+E + + E + E+ ++ ++ EN+ DNQ +P ++ P P
Sbjct: 374 PNIPEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPNDK----SDRYIPYSP 429
Query: 90 ASPLFSTNEHTSEDTTS 106
P NE D S
Sbjct: 430 LPPKVLDNERKQSDPQS 446
>M.Javanica_Scaff25295g090692 on AAA29770 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 22.3 bits (46), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Query: 30 PQVIEDNECDNVYNNDYGEESEEEDELELQEETENEQDNQQFVPLEEFVINQGILDPSEP 89
P + ED+E + + E + E+ ++ ++ EN+ DNQ +P ++ P P
Sbjct: 362 PNIPEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPNDK----SDRYIPYSP 417
Query: 90 ASPLFSTNEHTSEDTTS 106
P NE D S
Sbjct: 418 LPPKVLDNERKQSDPQS 434
>M.Javanica_Scaff25295g090692 on AAW78134 TRAP (Invasion) [Plasmodium falciparum]
Length = 551
Score = 22.3 bits (46), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Query: 30 PQVIEDNECDNVYNNDYGEESEEEDELELQEETENEQDNQQFVPLEEFVINQGILDPSEP 89
P + ED+E + + E + E+ ++ ++ EN+ DNQ +P ++ P P
Sbjct: 374 PNIPEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPNDK----SDRYIPYSP 429
Query: 90 ASPLFSTNEHTSEDTTS 106
P NE D S
Sbjct: 430 LPPKVLDNERKQSDPQS 446
>M.Javanica_Scaff25295g090692 on AAA29771 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 22.3 bits (46), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 29 TPQVIEDNECDNVYNNDYGEESEEEDELELQEETENEQDNQQFVPLEEFVINQGILDPSE 88
P + ED+E + + E + E+ ++ ++ EN+ DNQ +P ++ P
Sbjct: 361 KPNIPEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPNDK----SDRYIPYS 416
Query: 89 PASPLFSTNEHTSEDTTS 106
P P NE D S
Sbjct: 417 PLPPKVLDNERKQSDPQS 434
>M.Javanica_Scaff25295g090692 on AAA29777 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 22.3 bits (46), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Query: 30 PQVIEDNECDNVYNNDYGEESEEEDELELQEETENEQDNQQFVPLEEFVINQGILDPSEP 89
P + ED+E + + E + E+ ++ ++ EN+ DNQ +P ++ P P
Sbjct: 362 PNIPEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPNDK----SDRYIPYSP 417
Query: 90 ASPLFSTNEHTSEDTTS 106
P NE D S
Sbjct: 418 LPPKVLDNERKQSDPQS 434
>M.Javanica_Scaff25295g090692 on XP_001351435 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2209
Score = 22.3 bits (46), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 59 QEETENEQDNQQFVPLEEFVINQGILDPSEPASPL 93
+EE EN ++Q+ + V+ + PS PA+P+
Sbjct: 875 EEEAENHSNDQEDKDTLDAVVENTEVGPSGPATPV 909
>M.Javanica_Scaff25295g090692 on AAA29773 TRAP (Invasion) [Plasmodium falciparum]
Length = 568
Score = 22.3 bits (46), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Query: 30 PQVIEDNECDNVYNNDYGEESEEEDELELQEETENEQDNQQFVPLEEFVINQGILDPSEP 89
P + ED+E + + E + E+ ++ ++ EN+ DNQ +P ++ P P
Sbjct: 371 PNIPEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPNDK----SDRYIPYSP 426
Query: 90 ASPLFSTNEHTSEDTTS 106
P NE D S
Sbjct: 427 LPPKVLDNERKQSDPQS 443
>M.Javanica_Scaff25295g090692 on XP_815479 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1047
Score = 22.3 bits (46), Expect = 9.7, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Query: 30 PQVIEDNECDNVYNNDYGEESEEEDELELQEETENEQDNQQFVPLEEFV 78
P ED DN+ + GEES ED E+ + + N P E +
Sbjct: 945 PTSAEDT--DNISRTE-GEESSSEDVKEVPQTVDTAPGNTNTTPGETMI 990
>M.Javanica_Scaff25295g090692 on AAW78169 TRAP (Invasion) [Plasmodium falciparum]
Length = 551
Score = 22.3 bits (46), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Query: 30 PQVIEDNECDNVYNNDYGEESEEEDELELQEETENEQDNQQFVPLEEFVINQGILDPSEP 89
P + ED+E + + E + E+ ++ ++ EN+ DNQ +P ++ P P
Sbjct: 374 PNIPEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPNDK----SDRYIPYSP 429
Query: 90 ASPLFSTNEHTSEDTTS 106
P NE D S
Sbjct: 430 LPPKVLDNERKQSDPQS 446
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff25891g091578
(58 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_803409 VSG (Establishment) [Trypanosoma brucei] 26 0.15
XP_001610197 variant erythrocyte surface antigen-1, beta subuni... 25 0.29
XP_001611898 variant erythrocyte surface antigen-1, beta subuni... 24 0.68
XP_001609936 variant erythrocyte surface antigen-1, beta subuni... 23 1.2
AAB65410 AMA1 (Invasion) [Toxoplasma gondii] 22 3.4
XP_001610720 variant erythrocyte surface antigen-1, beta subuni... 22 4.3
XP_001608664 variant erythrocyte surface antigen-1, beta subuni... 22 4.4
XP_001610496 variant erythrocyte surface antigen-1, beta subuni... 21 5.4
XP_805038 Trans-sialidase (Invasion) [Trypanosoma cruzi] 21 6.6
XP_813578 Trans-sialidase (Invasion) [Trypanosoma cruzi] 21 7.0
XP_812152 Trans-sialidase (Invasion) [Trypanosoma cruzi] 21 7.8
>M.Javanica_Scaff25891g091578 on XP_803409 VSG (Establishment) [Trypanosoma brucei]
Length = 501
Score = 25.8 bits (55), Expect = 0.15, Method: Composition-based stats.
Identities = 11/19 (57%), Positives = 12/19 (63%)
Query: 39 GAGGAGTCPVWTKVDGSGS 57
GAG GTC V+ GSGS
Sbjct: 212 GAGQTGTCGVFETASGSGS 230
>M.Javanica_Scaff25891g091578 on XP_001610197 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1123
Score = 24.6 bits (52), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 10/19 (52%), Positives = 14/19 (73%), Gaps = 2/19 (10%)
Query: 25 PQQCP--MGWSADGSPGAG 41
P+ CP MGWSA+ + G+G
Sbjct: 722 PKHCPVPMGWSAESTSGSG 740
>M.Javanica_Scaff25891g091578 on XP_001611898 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1214
Score = 23.9 bits (50), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 19 VDGQYSPQQCPMGWSADGSPGAG 41
+D Q+ PMGWS DG G
Sbjct: 743 LDKQHGHCPVPMGWSTDGRNTTG 765
>M.Javanica_Scaff25891g091578 on XP_001609936 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1133
Score = 23.1 bits (48), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 3/20 (15%)
Query: 22 QYSPQQCP--MGWSADGSPG 39
QY PQ CP MGWS +G+ G
Sbjct: 726 QY-PQLCPVPMGWSKEGTSG 744
>M.Javanica_Scaff25891g091578 on AAB65410 AMA1 (Invasion) [Toxoplasma gondii]
Length = 255
Score = 21.9 bits (45), Expect = 3.4, Method: Composition-based stats.
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 35 DGSPGAGGAGTCPVWTK 51
DG+ AG CP+W K
Sbjct: 78 DGTLYREPAGLCPIWGK 94
>M.Javanica_Scaff25891g091578 on XP_001610720 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1102
Score = 21.6 bits (44), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 14/46 (30%)
Query: 16 FASVDGQYSPQQCP--MGWSADGS-----------PGAGGAGTCPV 48
F + D Y P+ CP MGWSA+ G+G AGT P
Sbjct: 711 FGTPDLNY-PKLCPVPMGWSAESGSGSTQQRENHFKGSGAAGTYPA 755
>M.Javanica_Scaff25891g091578 on XP_001608664 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1116
Score = 21.6 bits (44), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 14/46 (30%)
Query: 16 FASVDGQYSPQQCP--MGWSADGS-----------PGAGGAGTCPV 48
F + D Y P+ CP MGWSA+ G+G AGT P
Sbjct: 725 FGTPDLNY-PKLCPVPMGWSAESGSGSTQQRENHFKGSGAAGTYPA 769
>M.Javanica_Scaff25891g091578 on XP_001610496 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1159
Score = 21.2 bits (43), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 8/13 (61%), Positives = 8/13 (61%)
Query: 29 PMGWSADGSPGAG 41
PMGWS DG G
Sbjct: 747 PMGWSTDGRNTTG 759
>M.Javanica_Scaff25891g091578 on XP_805038 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 927
Score = 21.2 bits (43), Expect = 6.6, Method: Composition-based stats.
Identities = 7/29 (24%), Positives = 13/29 (44%)
Query: 24 SPQQCPMGWSADGSPGAGGAGTCPVWTKV 52
+ ++ P GW+ +G C W K+
Sbjct: 512 ATKKVPSGWTFEGRSAGAEWPVCKQWPKM 540
>M.Javanica_Scaff25891g091578 on XP_813578 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 893
Score = 21.2 bits (43), Expect = 7.0, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 27 QCPMGWSADGSPGAGGAGT 45
Q G S DG+P GG T
Sbjct: 803 QVTSGTSPDGNPTVGGGST 821
>M.Javanica_Scaff25891g091578 on XP_812152 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 923
Score = 20.8 bits (42), Expect = 7.8, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 27 QCPMGWSADGSPGAGGAGT 45
Q G S DG+P GG T
Sbjct: 832 QVTSGTSPDGNPTVGGGST 850
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6846g045717
(83 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_803420 VSG (Establishment) [Trypanosoma brucei] 23 2.9
XP_814625 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.0
XP_806668 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.1
XP_805943 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.6
XP_829794 VSG (Establishment) [Trypanosoma brucei] 23 3.8
XP_803379 VSG (Establishment) [Trypanosoma brucei] 22 4.5
XP_821146 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 6.1
XP_827707 VSG (Establishment) [Trypanosoma brucei] 22 6.9
XP_820458 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 9.5
>M.Javanica_Scaff6846g045717 on XP_803420 VSG (Establishment) [Trypanosoma brucei]
Length = 526
Score = 23.1 bits (48), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 9/15 (60%), Positives = 12/15 (80%)
Query: 5 LLLLMQCCVAQHLTE 19
L+LL +CC AQ +TE
Sbjct: 23 LMLLSRCCQAQAVTE 37
>M.Javanica_Scaff6846g045717 on XP_814625 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 941
Score = 23.1 bits (48), Expect = 3.0, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 4/34 (11%)
Query: 5 LLLLMQCCVAQHLTEAELKHQ----KIKLIKETE 34
LL++M CC A EAE + K K++K+ +
Sbjct: 50 LLVVMMCCTAGGAAEAEEQSSAPKFKWKVVKDED 83
>M.Javanica_Scaff6846g045717 on XP_806668 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 779
Score = 23.1 bits (48), Expect = 3.1, Method: Composition-based stats.
Identities = 9/17 (52%), Positives = 15/17 (88%)
Query: 28 KLIKETEEKFKKLLEPT 44
KL+K T++K K++L+PT
Sbjct: 130 KLLKLTDQKPKEVLDPT 146
>M.Javanica_Scaff6846g045717 on XP_805943 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 983
Score = 22.7 bits (47), Expect = 3.6, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 5 LLLLMQCCVAQHLTEAELKHQKIKLIKETEEKFKKLLEPTL 45
LLL + C AE + K+I + E F + TL
Sbjct: 15 LLLFVMVCCGSGAAPAEASNSGKKIIFQVSESFSDSMNATL 55
>M.Javanica_Scaff6846g045717 on XP_829794 VSG (Establishment) [Trypanosoma brucei]
Length = 476
Score = 22.7 bits (47), Expect = 3.8, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 14/29 (48%)
Query: 18 TEAELKHQKIKLIKETEEKFKKLLEPTLE 46
T + H IKL E K K LLE T E
Sbjct: 38 TPCKSAHYLIKLAAAAEGKLKSLLEKTTE 66
>M.Javanica_Scaff6846g045717 on XP_803379 VSG (Establishment) [Trypanosoma brucei]
Length = 532
Score = 22.3 bits (46), Expect = 4.5, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 41 LEPTLEFDACSYNFLRLCNRRRNVMDNTSVRSTEDAGSHPAPD 83
+ P D SYN +R N + D ++DA + P P+
Sbjct: 51 IPPQESVDEASYNKIRNLNFSTSTTDWRKTFYSDDALTKPHPE 93
>M.Javanica_Scaff6846g045717 on XP_821146 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 911
Score = 22.3 bits (46), Expect = 6.1, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 5 LLLLMQCCVAQHLTEAELKHQKIK 28
LLL+M CC A EA ++ + K
Sbjct: 52 LLLVMMCCNAGGAAEAAVQSSEPK 75
>M.Javanica_Scaff6846g045717 on XP_827707 VSG (Establishment) [Trypanosoma brucei]
Length = 474
Score = 21.9 bits (45), Expect = 6.9, Method: Composition-based stats.
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 17 LTEAELKHQKIKLIKETEEKFKKLLE 42
L +++ K K+K IKE ++ + L+E
Sbjct: 347 LQDSKYKSTKLKRIKELSQEIQNLIE 372
>M.Javanica_Scaff6846g045717 on XP_820458 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 923
Score = 21.6 bits (44), Expect = 9.5, Method: Composition-based stats.
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 5 LLLLMQCCVAQHLTEAELKHQKI 27
L+++M CC EAE+K +
Sbjct: 51 LIVVMMCCNTGVAAEAEVKESTV 73
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5969g041878
(145 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350798 PfEMP1 (Establishment) [Plasmodium falciparum] 25 3.2
XP_650534 HgI (Adhesin) [Entamoeba histolytica] 24 3.8
>M.Javanica_Scaff5969g041878 on XP_001350798 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2359
Score = 24.6 bits (52), Expect = 3.2, Method: Composition-based stats.
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 29 LARALNNDRGKKCDKHQFCASDADCY 54
L + +NN GK+ + C D DC+
Sbjct: 790 LDKCINNTNGKQTKCRKGCKGDCDCF 815
>M.Javanica_Scaff5969g041878 on XP_650534 HgI (Adhesin) [Entamoeba histolytica]
Length = 1207
Score = 24.3 bits (51), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 8/79 (10%)
Query: 55 GGKCFGVHVGRCMCQCVKNRRCRLDLHCGLLQ-NACDLKTGRCKC---ENAYKMLGFSSI 110
G K G G C C + +C+ D G CD G KC +N ++ G +
Sbjct: 579 GMKVCGKVNGNCRCDASTSYQCKCDTSNGCTNGEVCDYTDGDPKCINVDNCEELKGHDIV 638
Query: 111 KEAYSKFCFKKSCTKFNEN 129
E C+KK C ++ N
Sbjct: 639 WEG----CYKKVCKEYTAN 653
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3604g030091
(372 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_803103 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 4.5
XP_807433 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 5.9
XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum] 25 6.7
XP_001351079 PfEMP1 (Establishment) [Plasmodium falciparum] 25 7.9
>M.Javanica_Scaff3604g030091 on XP_803103 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 531
Score = 25.8 bits (55), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 22/118 (18%)
Query: 21 EEEEDLFKEELLEEKIEEKDSVFISSRCWSNSNGQN----ERWINEG-EIVDRGKYWYLC 75
+E L + + KIE++D + +++ +SN G W+ + IVD G
Sbjct: 301 DENVKLVRGGFITAKIEDRDVILVTTPVYSNEKGNRKGVLHLWLTDNTHIVDIGP----V 356
Query: 76 SGGKLVPAGCI---------DEKEKRIPLNKTFINGN----FLVECILWSNLIKIKTV 120
SG PA D KE+ I L + +G+ +V +L + L ++K V
Sbjct: 357 SGDDEDPAASSLLYKSAEGEDRKEELIALYEKKKDGDEASLGMVSVLLTAQLQRVKDV 414
>M.Javanica_Scaff3604g030091 on XP_807433 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1042
Score = 25.4 bits (54), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 64 EIVDRGKYWYL-CSGGKLVPAGCIDEKEKRIPLNK 97
E+ GKYW + G L+P DEK+K NK
Sbjct: 187 EVTGDGKYWVPRIAAGSLIPYDDDDEKKKEFKWNK 221
>M.Javanica_Scaff3604g030091 on XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2980
Score = 25.4 bits (54), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 23/114 (20%), Positives = 48/114 (42%), Gaps = 23/114 (20%)
Query: 68 RGKYWYLCSGGKLVPAGC-IDEKEKRIPLNKTFINGNFLVECILWSNLIKIKTVGCLDNE 126
RG Y C G +L C IDEK +SN I K+ G +
Sbjct: 779 RGTYNLGCQGDQLDATFCNIDEK---------------------YSNRIPRKSEGPCYGK 817
Query: 127 NNKTFFVGENWLNGEFLWECAWEGIYLKKRQKSCVFNKTKIINVGEQKIEGKTV 180
N + F+ G++W + + +++ ++L R++ + + +N+ + + ++
Sbjct: 818 NPQRFYTGKDWTHV-VQEKTSYKDVFLPPRREHMCTSNLENLNLNSKGLSNSSI 870
>M.Javanica_Scaff3604g030091 on XP_001351079 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2203
Score = 25.0 bits (53), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 27/134 (20%), Positives = 51/134 (38%), Gaps = 21/134 (15%)
Query: 126 ENNKTFFVGENWLNGEFLWECAWEGIYL-----KKRQKSCVFNKTKIINVGEQKIEGKTV 180
+ NKTF+ ++ C W G K + K C K +I + E +
Sbjct: 483 DGNKTFY------RTKYCEACPWCGAQKVEGGWKDKNKDCAKKKERIFD--EHNTTTIEI 534
Query: 181 FECKQNEYGLLNLVAIECISDDGKRXGKLVPAGCIDEKEKRIPLNKTFINGNFLFLWECA 240
+ + +L + C S +G +++ +KR+ T GN + W+C
Sbjct: 535 LTADKKQLDILKKYSKFCDSVNG--------TANVEKDKKRVSNGATGKKGNQIVTWQCY 586
Query: 241 WEGIYLKKRQKSCV 254
++ K+ +CV
Sbjct: 587 FDKEKPSKKNNNCV 600
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4412g034481
(256 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum] 24 8.6
>M.Javanica_Scaff4412g034481 on XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2994
Score = 24.3 bits (51), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 34/90 (37%), Gaps = 19/90 (21%)
Query: 32 GEEVKYYQYLDKKPSERFNLELTNNLLDNPIYGQTNGYDTYHFSQDDLVGKDESLI---T 88
GEE+KY N+ + N +D+P Y N Y D L G I
Sbjct: 2758 GEEIKY------------NINMGTNSMDDPTYVSNNVYSGIDLINDTLSGNQHIDIYDEV 2805
Query: 89 FFKLEVSMYGNNSVKGSIDNIENNSIVYII 118
+ E ++G N K N NN++ +
Sbjct: 2806 LKRKENELFGTNYKK----NTSNNNVAKLT 2831
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7204g047166
(100 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_821438 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.027
XP_818403 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.0
XP_808179 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.1
XP_807660 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.4
>M.Javanica_Scaff7204g047166 on XP_821438 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 957
Score = 29.3 bits (64), Expect = 0.027, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 7/63 (11%)
Query: 4 MSTITSVNSTNTCIIDLNPSISSIGTQSYSAAGENFDN-------KNFGSGSGYPKISVR 56
MST+++ ++ ++ + S GTQ+ AA + N +N G G P+I V
Sbjct: 800 MSTVSTSSAEEDSVVQVTSGTSPDGTQTMDAASSHDGNTAVETEARNTVQGDGSPQIPVG 859
Query: 57 IPD 59
I D
Sbjct: 860 ISD 862
>M.Javanica_Scaff7204g047166 on XP_818403 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 957
Score = 25.0 bits (53), Expect = 1.0, Method: Composition-based stats.
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 25 SSIGTQSYSAAGENFDNKNFGSGSG 49
SS GTQS +AA + +K G G+G
Sbjct: 823 SSDGTQSVNAASSSVGDKRVGRGAG 847
>M.Javanica_Scaff7204g047166 on XP_808179 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 942
Score = 24.6 bits (52), Expect = 1.1, Method: Composition-based stats.
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 25 SSIGTQSYSAAGENFDNKNFGSGSG 49
SS GTQS AA + +K G G+G
Sbjct: 806 SSDGTQSVDAASSSVGDKRVGRGAG 830
>M.Javanica_Scaff7204g047166 on XP_807660 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 269
Score = 23.1 bits (48), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 25 SSIGTQSYSAAGENFDNKNFGSGSG 49
SS GTQS +AA + +K G G+G
Sbjct: 134 SSDGTQSVNAASSSVGDKRVGRGAG 158
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5458g039555
(348 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_808156 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 5.9
>M.Javanica_Scaff5458g039555 on XP_808156 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1058
Score = 25.4 bits (54), Expect = 5.9, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 7/44 (15%)
Query: 26 PTS--NIENSGRDDILDVEGERGENVLRTIE-----TQTTPAQS 62
PTS + +N R D +V E G+ V +T+E T TTP ++
Sbjct: 956 PTSAEDTDNISRTDGAEVSSENGKEVPQTVETAPGNTNTTPGET 999
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff281g004366
(118 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAK49521 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum] 23 7.5
AAM45250 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum] 23 8.1
AAM45258 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum] 23 8.1
AAL23761 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum] 23 8.3
AAM45253 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum] 23 8.4
AAM45255 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum] 23 8.4
>M.Javanica_Scaff281g004366 on AAK49521 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum]
Length = 1210
Score = 22.7 bits (47), Expect = 7.5, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 71 EEHGIVTDWGDINLFKYQFREKNFRWACQII 101
+EH + + L KY+++EK+ C II
Sbjct: 505 KEHLLGASIYEAQLLKYKYKEKDENALCSII 535
>M.Javanica_Scaff281g004366 on AAM45250 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum]
Length = 616
Score = 22.7 bits (47), Expect = 8.1, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 71 EEHGIVTDWGDINLFKYQFREKNFRWACQII 101
+EH + + L KY+++EK+ C II
Sbjct: 365 KEHLLGASIYEAQLLKYKYKEKDENALCSII 395
>M.Javanica_Scaff281g004366 on AAM45258 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum]
Length = 616
Score = 22.7 bits (47), Expect = 8.1, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 71 EEHGIVTDWGDINLFKYQFREKNFRWACQII 101
+EH + + L KY+++EK+ C II
Sbjct: 365 KEHLLGASIYEAQLLKYKYKEKDENALCSII 395
>M.Javanica_Scaff281g004366 on AAL23761 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum]
Length = 616
Score = 22.7 bits (47), Expect = 8.3, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 71 EEHGIVTDWGDINLFKYQFREKNFRWACQII 101
+EH + + L KY+++EK+ C II
Sbjct: 365 KEHLLGASIYEAQLLKYKYKEKDENALCSII 395
>M.Javanica_Scaff281g004366 on AAM45253 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum]
Length = 616
Score = 22.7 bits (47), Expect = 8.4, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 71 EEHGIVTDWGDINLFKYQFREKNFRWACQII 101
+EH + + L KY+++EK+ C II
Sbjct: 365 KEHLLGASIYEAQLLKYKYKEKDENALCSII 395
>M.Javanica_Scaff281g004366 on AAM45255 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum]
Length = 616
Score = 22.7 bits (47), Expect = 8.4, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 71 EEHGIVTDWGDINLFKYQFREKNFRWACQII 101
+EH + + L KY+++EK+ C II
Sbjct: 365 KEHLLGASIYEAQLLKYKYKEKDENALCSII 395
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6480g044133
(230 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7758g049367
(91 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_813143 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.38
XP_001349032 PfEMP1 (Establishment) [Plasmodium falciparum] 25 0.51
XP_829767 VSG (Establishment) [Trypanosoma brucei] 25 1.0
XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum] 23 4.0
XP_001610568 variant erythrocyte surface antigen-1, alpha subun... 23 4.2
XP_808840 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.3
XP_808213 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.4
XP_844697 VSG (Establishment) [Trypanosoma brucei] 22 5.3
XP_805213 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 7.9
XP_813726 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 8.2
XP_806300 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 9.5
>M.Javanica_Scaff7758g049367 on XP_813143 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 795
Score = 25.8 bits (55), Expect = 0.38, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 12 CSRGGSEQPEVSEIGTIGNGSKVGNRKSK 40
C+ GG++ E+S G+G GN++S+
Sbjct: 670 CTLGGTDLREISHFYIGGDGGSTGNKESR 698
>M.Javanica_Scaff7758g049367 on XP_001349032 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2267
Score = 25.4 bits (54), Expect = 0.51, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 29 GNGSKVGNRKSKFFSEIGRKKTSEIGIPTHLRYV 62
G GS V K + E G+ +T+E +PT+ YV
Sbjct: 279 GKGSSVARNKCRCKDEEGKNETNE--VPTYFDYV 310
>M.Javanica_Scaff7758g049367 on XP_829767 VSG (Establishment) [Trypanosoma brucei]
Length = 452
Score = 24.6 bits (52), Expect = 1.0, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 12 CSRGGSEQPEVSEIGTIGNGSKVGNRKSK 40
C GG+++P+ + GTI GN +SK
Sbjct: 210 CGGGGTQKPQNTVAGTIICVCGTGNTQSK 238
Score = 23.1 bits (48), Expect = 3.6, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Query: 38 KSKFFSEIGRKKTSEIGIPTHLRYVGKTKHFCAYLYQFKK 77
+ + SE RKK + + + + V K H YL+QF+K
Sbjct: 351 RDNYNSEQRRKKAAIADLISRAKAVTKRAH---YLFQFQK 387
>M.Javanica_Scaff7758g049367 on XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3954
Score = 23.1 bits (48), Expect = 4.0, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 33 KVGNRKSKFFSEIGRKKTSEIGIPTHLRYVGK 64
K GN ++ F + + KT+ IG+ H G+
Sbjct: 2428 KCGNFRTLFKTSTSKTKTNLIGLEAHNHRAGR 2459
>M.Javanica_Scaff7758g049367 on XP_001610568 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1329
Score = 22.7 bits (47), Expect = 4.2, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 34 VGNRKSKFFSEIGRKKTSE-IGIPTHLRYVGKTKHFCAY 71
VGN+ + G +KT + G P+ KTK+FC +
Sbjct: 997 VGNKDKGIPPKGGDEKTCDHTGNPSETSEENKTKYFCGW 1035
>M.Javanica_Scaff7758g049367 on XP_808840 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 821
Score = 22.7 bits (47), Expect = 4.3, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 12 CSRGGSEQPEVSEIGTIGNGSKVGNRK 38
C+ G +E E+S G+G G+R+
Sbjct: 671 CTLGSTESQEISHFYIGGDGGSAGSRE 697
>M.Javanica_Scaff7758g049367 on XP_808213 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 819
Score = 22.7 bits (47), Expect = 4.4, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 12 CSRGGSEQPEVSEIGTIGNGSKVGNRK 38
C+ G +E E+S G+G G+R+
Sbjct: 669 CTLGSTESQEISHFYIGGDGGSAGSRE 695
>M.Javanica_Scaff7758g049367 on XP_844697 VSG (Establishment) [Trypanosoma brucei]
Length = 342
Score = 22.3 bits (46), Expect = 5.3, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 3 GKSALKMIVC-SRGGSEQPEVSEIGTIGNGSKVGNRK 38
GK+ ++ ++C G + QP++ ++ GN KV +++
Sbjct: 104 GKALVRDLICLCEGTNRQPDLKDLCYTGNVRKVNSQE 140
>M.Javanica_Scaff7758g049367 on XP_805213 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 338
Score = 21.9 bits (45), Expect = 7.9, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 12 CSRGGSEQPEVSEIGTIGNGSKVGNRK 38
C G +E E+S G+G G+R+
Sbjct: 188 CELGSTESQEISHFYIGGDGRSAGSRE 214
>M.Javanica_Scaff7758g049367 on XP_813726 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 924
Score = 21.9 bits (45), Expect = 8.2, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 3 GKSALKMIVCSRGGSEQPEVSEIGTIGNGSKVGNRK 38
GKS + + C G E ++S G+G G+++
Sbjct: 667 GKSVCENVQCQLEGKEDKKISHFYIGGDGGSTGSQE 702
>M.Javanica_Scaff7758g049367 on XP_806300 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 274
Score = 21.6 bits (44), Expect = 9.5, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 3 GKSALKMIVCSRGGSEQPEVSEIGTIGNGSKVGNRK 38
G+ L+ + C G E +S G+GS G+++
Sbjct: 45 GRRVLENVQCQLEGKENKNISHFYFGGDGSNTGSQE 80
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4326g034023
(104 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_814919 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.51
XP_815193 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.99
XP_803984 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.9
XP_812068 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.7
>M.Javanica_Scaff4326g034023 on XP_814919 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 854
Score = 25.8 bits (55), Expect = 0.51, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 16/76 (21%)
Query: 30 GACSPIYLSRRGIDLGRYRPLI-RFNPDKVQLIPKNPVIPGCVKIKAEGVEILKPIKNLF 88
G C ++ R + + RP I F P+K Q++PK+ EG +KN+F
Sbjct: 126 GTCGAVHAVERNLGDLQMRPEIAMFLPNKTQVVPKS---------GGEG-----KVKNIF 171
Query: 89 AEIEM-RIGGRYSSFI 103
A + GG +F+
Sbjct: 172 ASPSLVSAGGVMIAFV 187
>M.Javanica_Scaff4326g034023 on XP_815193 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 702
Score = 25.0 bits (53), Expect = 0.99, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
Query: 43 DLGRYRPLIR---FNPDKVQLIPKNPVIPG 69
DL +R L R F P K Q++PK PG
Sbjct: 20 DLRNFRKLQRVDLFVPQKTQVLPKGGGTPG 49
>M.Javanica_Scaff4326g034023 on XP_803984 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 794
Score = 23.9 bits (50), Expect = 2.9, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 27 RVSGACSPIYLSRRGIDLGRYRPLIRFNPDKVQLIPK 63
R SGA L R DL + + F P+K Q++PK
Sbjct: 58 RGSGAAHA--LERNSGDLQMPQEIAMFVPNKTQVVPK 92
>M.Javanica_Scaff4326g034023 on XP_812068 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 812
Score = 23.5 bits (49), Expect = 3.7, Method: Composition-based stats.
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 53 FNPDKVQLIPKNPVIPG 69
F P K ++PK+ ++PG
Sbjct: 86 FVPQKTPVLPKDGIVPG 102
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff680g008831
(69 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAZ38165 ROP14 (Establishment) [Toxoplasma gondii] 27 0.079
XP_813237 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.6
>M.Javanica_Scaff680g008831 on AAZ38165 ROP14 (Establishment) [Toxoplasma gondii]
Length = 255
Score = 26.9 bits (58), Expect = 0.079, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 6 YLISSLFIFTTGQGLFGGCGIRPPSNYL 33
Y + L F QGL G GI P S+Y+
Sbjct: 102 YFFAFLIAFNQSQGLIGSDGILPASDYV 129
>M.Javanica_Scaff680g008831 on XP_813237 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1496
Score = 23.1 bits (48), Expect = 1.6, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Query: 1 MLFK--YYLISSLFIFTTGQGLFGGCGIR 27
MLF Y L SLF F G L G IR
Sbjct: 164 MLFTTPYRLFGSLFAFVEGYDLRNGARIR 192
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6449g043983
(264 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_816855 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.9
XP_816852 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.0
>M.Javanica_Scaff6449g043983 on XP_816855 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 754
Score = 26.6 bits (57), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 243 PNKILEDNTNHIDLNKKFILLT 264
P I +DN H+ LN+ F L+
Sbjct: 504 PVSIPDDNVRHVSLNRNFTLVA 525
>M.Javanica_Scaff6449g043983 on XP_816852 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 739
Score = 26.6 bits (57), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 240 VEEPNKILEDNTNHIDLNKKFILLT 264
V P I +DN H+ LN+ F L+
Sbjct: 539 VIWPVSIPDDNVRHVSLNRNFTLVA 563
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4157g033141
(99 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_806966 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.0
XP_808800 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.7
XP_820795 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.5
XP_803400 VSG (Establishment) [Trypanosoma brucei] 24 2.6
XP_001351321 PfEMP1 (Establishment) [Plasmodium falciparum] 23 4.4
>M.Javanica_Scaff4157g033141 on XP_806966 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 777
Score = 25.0 bits (53), Expect = 1.0, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 40 LTEEPPFAGGSTSEIVAEDEGVHGDS 65
LT+ A G+T E A D G HG S
Sbjct: 730 LTDLKKLAAGATGEGTARDGGAHGGS 755
>M.Javanica_Scaff4157g033141 on XP_808800 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 776
Score = 24.3 bits (51), Expect = 1.7, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 46 FAGGSTSEIVAEDEGVHGDSA 66
A G+T E A D G HGD +
Sbjct: 734 LAAGATGEGTARDGGAHGDGS 754
>M.Javanica_Scaff4157g033141 on XP_820795 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 782
Score = 23.9 bits (50), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 40 LTEEPPFAGGSTSEIVAEDEGVHGDS 65
LT+ A G+T E A D G HG S
Sbjct: 735 LTDLKTLAAGATGEGTARDGGAHGGS 760
>M.Javanica_Scaff4157g033141 on XP_803400 VSG (Establishment) [Trypanosoma brucei]
Length = 483
Score = 23.9 bits (50), Expect = 2.6, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 25 GSSGDWGYGDFGYSHLTEEPPFAGGSTSEI 54
G+SGD+G G T+E FA + ++I
Sbjct: 258 GTSGDYGRGHISSYSETDEDHFAKQAATDI 287
>M.Javanica_Scaff4157g033141 on XP_001351321 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3467
Score = 23.1 bits (48), Expect = 4.4, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 61 VHGDSAKGYSAAGSEPASSVDRTDVLAITPRR 92
V+GD ++ + A E D + + + PRR
Sbjct: 2143 VNGDRSQRHRRAAGEATGKSDASGSICVPPRR 2174
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5072g037698
(57 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_845634 VSG (Establishment) [Trypanosoma brucei] 24 0.62
>M.Javanica_Scaff5072g037698 on XP_845634 VSG (Establishment) [Trypanosoma brucei]
Length = 461
Score = 23.9 bits (50), Expect = 0.62, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 20 QKILHILNSARRDESNGIYFKFRSRCSYTKVQ 51
Q I I+NS DE+ IY K ++ Q
Sbjct: 98 QHITEIINSKHGDENKQIYAKLTNKAQKASAQ 129
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff27771g094191
(215 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_819344 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.84
XP_821148 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 5.5
XP_001611897 variant erythrocyte surface antigen-1, alpha subun... 25 6.0
XP_001351435 PfEMP1 (Establishment) [Plasmodium falciparum] 24 7.6
>M.Javanica_Scaff27771g094191 on XP_819344 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 861
Score = 27.3 bits (59), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 11/69 (15%)
Query: 76 YQLNDFGNPHSRTHAYGWETEKAVDIARKQVADLIGADQREIIFTSG------ATESNNI 129
++L+ G +S+ H WETEK QVA ++ + + G + E N
Sbjct: 609 WELSCGGGTNSQEHNSAWETEKTY-----QVAIVLHNGTQGSAYVDGQRVGDASCELQNT 663
Query: 130 AIKGVANFY 138
KG+++FY
Sbjct: 664 KDKGISHFY 672
>M.Javanica_Scaff27771g094191 on XP_821148 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 924
Score = 24.6 bits (52), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 76 YQLNDFGNPHSRTHAYGWETEKAVDIA 102
+QL+ G +S+ H+ W+ EK +A
Sbjct: 617 WQLSCGGGTNSQEHSSAWDKEKKYQVA 643
>M.Javanica_Scaff27771g094191 on XP_001611897 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1369
Score = 24.6 bits (52), Expect = 6.0, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 14 GKISQATVSSNAAESSRSERMEKLQNGIV 42
G IS + N E R R+EKL+ G+V
Sbjct: 640 GVISWMCLGCNPMEHDRKCRVEKLRKGLV 668
>M.Javanica_Scaff27771g094191 on XP_001351435 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2209
Score = 24.3 bits (51), Expect = 7.6, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 14/61 (22%)
Query: 32 ERMEKLQ-------------NGIVEAFVSSDVNVRPIYLDVQATTPTDPRVVDAMLPYQL 78
ER++KL+ NGI SSD++ I+ + TP+D + + +PY L
Sbjct: 2067 ERLDKLKELWDNETHSGNKHNGIQSNIPSSDIHPSDIHSGKLSDTPSDNN-IHSDIPYVL 2125
Query: 79 N 79
N
Sbjct: 2126 N 2126
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5233g038463
(76 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001610568 variant erythrocyte surface antigen-1, alpha subun... 25 0.41
XP_001349514 PfEMP1 (Establishment) [Plasmodium falciparum] 22 4.5
>M.Javanica_Scaff5233g038463 on XP_001610568 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1329
Score = 25.0 bits (53), Expect = 0.41, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 27 EVDKVLWEVTAGELGRAPAAVSDTLEQQKE 56
E++K+L V G+ G P A+ D LE+ E
Sbjct: 652 ELEKILNGVPKGKSGDLPGALKDVLEKIGE 681
>M.Javanica_Scaff5233g038463 on XP_001349514 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2120
Score = 22.3 bits (46), Expect = 4.5, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 6 EIIEETMESFEPENMEELAQEEVDKVLWE 34
E ++ET+ PE +E+ E+ K L+E
Sbjct: 800 EAVQETVAEVTPEKKDEVNPCEIVKTLFE 828
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6650g044870
(53 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2973g026384
(71 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_844692 VSG (Establishment) [Trypanosoma brucei] 23 1.5
XP_001352170 MSP1 (Invasion) [Plasmodium falciparum] 22 3.3
>M.Javanica_Scaff2973g026384 on XP_844692 VSG (Establishment) [Trypanosoma brucei]
Length = 482
Score = 23.5 bits (49), Expect = 1.5, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 15 VESLFVGDWTEPEAMENCFHQVKILQLFQCHSHLS 49
VE LF+G W EA + KI L + + L+
Sbjct: 8 VELLFLGHWRHAEATHAALDEEKIKTLCKIANQLT 42
>M.Javanica_Scaff2973g026384 on XP_001352170 MSP1 (Invasion) [Plasmodium falciparum]
Length = 1720
Score = 22.3 bits (46), Expect = 3.3, Method: Composition-based stats.
Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 1 MEERLERAAEALAGVESLFVGDWTEPEAMENCFHQVKILQLFQCHSHLSEASKQIWASHL 60
ME+ +++ +A + L G + +N ++ +L+Q LS +KQ+ +H
Sbjct: 253 MEDYIKKNKTTIANINELIEGSKKTIDQNKNADNEEGKKKLYQAQYDLSIYNKQLEEAHN 312
Query: 61 MAVSMFE 67
+ +S+ E
Sbjct: 313 L-ISVLE 318
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6009g042053
(183 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349533 PfEMP3 (Establishment) [Plasmodium falciparum] 27 0.55
XP_827758 VSG (Establishment) [Trypanosoma brucei] 24 5.6
XP_001611897 variant erythrocyte surface antigen-1, alpha subun... 24 6.6
XP_001608795 variant erythrocyte surface antigen-1, alpha subun... 24 8.5
>M.Javanica_Scaff6009g042053 on XP_001349533 PfEMP3 (Establishment) [Plasmodium falciparum]
Length = 2441
Score = 27.3 bits (59), Expect = 0.55, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 33 PNQSTMLYDKNFLDSNQSINNEPASRCDNCDQNTISK 69
P++S YD++ L + I N+P D DQ ++K
Sbjct: 675 PHESVDEYDQSELAKGKDITNKPHESVDEYDQTELAK 711
Score = 27.3 bits (59), Expect = 0.55, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 33 PNQSTMLYDKNFLDSNQSINNEPASRCDNCDQNTISK 69
P++S YD++ L + I N+P D DQ ++K
Sbjct: 741 PHESVDEYDQSELAKGKDITNKPHESVDEYDQTELAK 777
Score = 24.3 bits (51), Expect = 5.7, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 40 YDKNFLDSNQSINNEPASRCDNCDQNTISK 69
YD+ L + I N+P D DQ+ ++K
Sbjct: 660 YDQTELAKGKDITNKPHESVDEYDQSELAK 689
>M.Javanica_Scaff6009g042053 on XP_827758 VSG (Establishment) [Trypanosoma brucei]
Length = 487
Score = 24.3 bits (51), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 28/69 (40%), Gaps = 12/69 (17%)
Query: 112 ADYLIYANSSYSFLALNTGASEISNGKKTYEFSPSMNFIPNGKTFLNA----PFLSVSCS 167
D+L A + + LA + G KTY S IPN KT A L +
Sbjct: 236 GDFLKTAAVTTTRLASSAG--------KTYPAITSTTTIPNDKTLNKAVTAIRKLETAVE 287
Query: 168 GCDAISDPS 176
DAISD S
Sbjct: 288 ALDAISDVS 296
>M.Javanica_Scaff6009g042053 on XP_001611897 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1369
Score = 24.3 bits (51), Expect = 6.6, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 153 GKTFLNAPFLSVSCSGCDAISDPS 176
G L + FL + C GC DP+
Sbjct: 1145 GLKSLTSEFLQIECRGCKGQCDPN 1168
>M.Javanica_Scaff6009g042053 on XP_001608795 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1323
Score = 23.9 bits (50), Expect = 8.5, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 152 NGKTFLNAPFLSVSCSGCDAISDPS 176
+G L+ FL + C GC DP+
Sbjct: 1113 SGLESLSEAFLQIECRGCKGQCDPN 1137
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5943g041746
(63 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff783g009860
(77 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_845640 VSG (Establishment) [Trypanosoma brucei] 26 0.22
XP_001351876 PfEMP1 (Establishment) [Plasmodium falciparum] 22 8.1
XP_001351561 PfEMP1 (Establishment) [Plasmodium falciparum] 22 9.5
XP_001348946 PfEMP1 (Establishment) [Plasmodium falciparum] 22 9.5
>M.Javanica_Scaff783g009860 on XP_845640 VSG (Establishment) [Trypanosoma brucei]
Length = 145
Score = 25.8 bits (55), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 23/51 (45%)
Query: 3 IYNLSRIAKENFFKLASQKCLVVFPPHALLVHELAVAEYVHCRVHVKQKTK 53
+ NL A E KL+ + + P A L ++ V C VH K KTK
Sbjct: 2 LINLEATAAEEAIKLSGAEAKLNGPLPAGLPTKVPPITTVTCEVHNKSKTK 52
>M.Javanica_Scaff783g009860 on XP_001351876 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3164
Score = 21.6 bits (44), Expect = 8.1, Method: Composition-based stats.
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 38 VAEYVHCRVHVKQKTKNTLLKKKKLKDQ 65
+ +Y+ + ++ +N +K KK KDQ
Sbjct: 3129 IRKYISLNILIQNSMENLNIKYKKFKDQ 3156
>M.Javanica_Scaff783g009860 on XP_001351561 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3553
Score = 21.6 bits (44), Expect = 9.5, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 21/39 (53%)
Query: 26 FPPHALLVHELAVAEYVHCRVHVKQKTKNTLLKKKKLKD 64
F H+LL L A++ ++ + K KN + +K++ D
Sbjct: 877 FASHSLLGDVLLAAKFEAQKIILVYKNKNNINIRKRITD 915
>M.Javanica_Scaff783g009860 on XP_001348946 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3553
Score = 21.6 bits (44), Expect = 9.5, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 21/39 (53%)
Query: 26 FPPHALLVHELAVAEYVHCRVHVKQKTKNTLLKKKKLKD 64
F H+LL L A++ ++ + K KN + +K++ D
Sbjct: 877 FASHSLLGDVLLAAKFEAQKIILVYKNKNNINIRKRITD 915
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3286g028287
(652 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7069g046599
(368 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_814969 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 7.7
XP_815192 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 9.3
>M.Javanica_Scaff7069g046599 on XP_814969 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 258
Score = 25.0 bits (53), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 6/48 (12%)
Query: 257 MNQTKIENIIAYTSISDPGKCPTRVYSGNPELAHGGPHTFIGGNMAYI 304
MN K+ + +T G P N GPHTF+ N A +
Sbjct: 51 MNAVKVHDGFKFTGFGSGGIWPVNNRESN------GPHTFVNYNFALV 92
>M.Javanica_Scaff7069g046599 on XP_815192 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 722
Score = 25.0 bits (53), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 170 AMREASYKILQ--STNVCLPYWDSTMDGSLPTPK--DSYFFTADFIGSTNATGQVIDGPF 225
A A K+++ S++V Y DS+ D S K +S + + +G+T+ +DG F
Sbjct: 131 AQYAADGKVIKPISSDVVAGYIDSSWDWSTLVDKVSESTWKAYNVLGTTDGANNRVDGVF 190
Query: 226 SPWET 230
+P T
Sbjct: 191 NPTTT 195
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff796g009987
(63 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001611442 variant erythrocyte surface antigen-1, alpha subun... 22 3.1
>M.Javanica_Scaff796g009987 on XP_001611442 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1350
Score = 22.3 bits (46), Expect = 3.1, Method: Composition-based stats.
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 27 HKSCTSTRSPEDTFKRMPFLSFYCTS 52
+K C +P D KR + +C S
Sbjct: 1027 NKKCDHVSNPSDQSKREEYFCGWCAS 1052
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff813g010170
(81 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350935 PfEMP1 (Establishment) [Plasmodium falciparum] 23 3.2
XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum] 22 5.4
XP_804432 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 7.4
XP_802364 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 9.0
XP_814929 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 10.0
>M.Javanica_Scaff813g010170 on XP_001350935 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2268
Score = 23.1 bits (48), Expect = 3.2, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 13/32 (40%), Gaps = 3/32 (9%)
Query: 9 ICSTISSNSTFAWSQNRHKPITFPCSGCPSSG 40
+CS N Q + P FP CPS G
Sbjct: 1301 VCSGYGENCD---DQLKDNPSIFPSLNCPSCG 1329
>M.Javanica_Scaff813g010170 on XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2994
Score = 22.3 bits (46), Expect = 5.4, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 3 NLWSSFICSTISSNSTFAWSQNRHKPITFPCSG 35
++W + CS S F S+ K T P G
Sbjct: 268 DVWKALTCSADDSEDYFIQSEGVTKSFTNPKCG 300
>M.Javanica_Scaff813g010170 on XP_804432 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 799
Score = 21.9 bits (45), Expect = 7.4, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 21 WSQNRHKPITFPCSGCPSSGIIFGKTSSILQNILLADFLCL 61
W+Q K + FP P++G++ + + + + ++LCL
Sbjct: 491 WAQ---KDVFFPGLSIPTAGLVAVLSDAASDDTWIDEYLCL 528
>M.Javanica_Scaff813g010170 on XP_802364 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 327
Score = 21.6 bits (44), Expect = 9.0, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 21 WSQNRHKPITFPCSGCPSSGIIFGKTSSILQNILLADFLCL 61
W+Q K + FP P++G++ + + + + ++LCL
Sbjct: 10 WAQ---KDVFFPGLSIPTAGLVAVLSDAASDDTWIDEYLCL 47
>M.Javanica_Scaff813g010170 on XP_814929 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 833
Score = 21.6 bits (44), Expect = 10.0, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 32 PCSGCPSSGIIFGKTSSILQNILLA 56
P G PS I +GK S +Q LA
Sbjct: 245 PAGGEPSGWIKWGKVQSPVQQTTLA 269
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff28247g094797
(219 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_820062 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.086
XP_808840 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.7
XP_810753 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.4
XP_821548 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.4
XP_815119 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.5
XP_001351564 PfEMP1 (Establishment) [Plasmodium falciparum] 25 4.2
>M.Javanica_Scaff28247g094797 on XP_820062 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 898
Score = 30.4 bits (67), Expect = 0.086, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 10/55 (18%)
Query: 1 MNIHLIFSSFILLILVPSKSLGCNC------GDSGPLSSTDPFDALGP----WHQ 45
M+ HL +S+ LL+L C C G SG + DPF P WH+
Sbjct: 39 MSRHLFYSAVPLLLLFVVMMCCCGCEAASADGSSGEGKAVDPFHGTKPAPYEWHE 93
>M.Javanica_Scaff28247g094797 on XP_808840 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 821
Score = 25.8 bits (55), Expect = 2.7, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 7/73 (9%)
Query: 62 DAQAKIHAIWVNYQAGDECEQEQEQTRAIIMAIPEETRMQLFKGVCGPGFLKNESDEVRD 121
+A + +W N G++ + I A EE + L V P + K ES+E
Sbjct: 343 EALGTLSRVWGNKHKGNK----KGVGNGFITATIEEKDVML---VTLPVYAKTESEENGK 395
Query: 122 RFMHFWFNDDMTI 134
+H W D+ I
Sbjct: 396 GRLHLWLTDNTHI 408
>M.Javanica_Scaff28247g094797 on XP_810753 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 955
Score = 25.4 bits (54), Expect = 3.4, Method: Composition-based stats.
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 109 PGFLKNESDEVRDRFMHFWFNDDMTI 134
P +LK E++ R +H W D+ I
Sbjct: 440 PAYLKTENEVNARRKLHLWLTDNTHI 465
>M.Javanica_Scaff28247g094797 on XP_821548 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 958
Score = 25.4 bits (54), Expect = 3.4, Method: Composition-based stats.
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 109 PGFLKNESDEVRDRFMHFWFNDDMTI 134
P +LK E++ R +H W D+ I
Sbjct: 443 PAYLKTENEVNARRKLHLWLTDNTHI 468
>M.Javanica_Scaff28247g094797 on XP_815119 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 380
Score = 25.0 bits (53), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 9/14 (64%), Positives = 9/14 (64%)
Query: 122 RFMHFWFNDDMTIE 135
RFM FWF DM E
Sbjct: 259 RFMGFWFRGDMACE 272
>M.Javanica_Scaff28247g094797 on XP_001351564 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2207
Score = 25.0 bits (53), Expect = 4.2, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 20 SLGCNCGDSGPLSSTDPFD 38
SLGCNC D+ +TD D
Sbjct: 1594 SLGCNCSDNSQKKNTDERD 1612
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff30960g098124
(64 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff8296g051449
(59 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum] 23 0.96
>M.Javanica_Scaff8296g051449 on XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2980
Score = 23.5 bits (49), Expect = 0.96, Method: Composition-based stats.
Identities = 8/27 (29%), Positives = 18/27 (66%)
Query: 29 QREYEVLNYFNTLEQQQGFAARNRIIK 55
+++ +V+++ L + AARNR+I+
Sbjct: 1096 EKDKDVVDFLKQLLPRNSAAARNRVIR 1122
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4412g034482
(69 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_965997 PfEMP1 (Establishment) [Plasmodium falciparum] 26 0.22
AAV85504 AP120 (Adhesin) [Trichomonas vaginalis] 25 0.35
XP_001350797 PfEMP1 (Establishment) [Plasmodium falciparum] 23 1.2
XP_808639 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.2
XP_807743 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.3
XP_813642 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 7.0
>M.Javanica_Scaff4412g034482 on XP_965997 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2879
Score = 25.8 bits (55), Expect = 0.22, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 4/38 (10%)
Query: 28 SGPSDKLYNIDNEQNATDRERKWW----YRWWSYGGCG 61
S SDK+ NI T+ KWW Y+ W CG
Sbjct: 2209 SSLSDKIGNIFTNTKDTNARSKWWNEIKYQVWHAMLCG 2246
>M.Javanica_Scaff4412g034482 on AAV85504 AP120 (Adhesin) [Trichomonas vaginalis]
Length = 255
Score = 25.0 bits (53), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 9/36 (25%), Positives = 21/36 (58%)
Query: 15 SLQIQANPVLYEVSGPSDKLYNIDNEQNATDRERKW 50
L + P+L +V PS+K+Y + ++ + +++ W
Sbjct: 154 DLAEKIKPLLAKVQNPSEKMYALQSQADILSKKQVW 189
>M.Javanica_Scaff4412g034482 on XP_001350797 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2287
Score = 23.5 bits (49), Expect = 1.2, Method: Composition-based stats.
Identities = 9/37 (24%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 32 DKLYNIDNEQNATDRERKWW--YRWWSYGGCGCGYGY 66
DK+ N N++ + ++ + WW + + + G C Y
Sbjct: 1142 DKILNSGNKEPSDEQRKTWWGDFAQYIWNGMICALTY 1178
>M.Javanica_Scaff4412g034482 on XP_808639 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 949
Score = 21.9 bits (45), Expect = 4.2, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 22/38 (57%)
Query: 7 LLVLLLVCSLQIQANPVLYEVSGPSDKLYNIDNEQNAT 44
LL+++++C A ++SGP+ K ++ +E+ T
Sbjct: 51 LLLVVMMCCNTGGAAEAAEQLSGPNYKWKDVKDEEGVT 88
>M.Javanica_Scaff4412g034482 on XP_807743 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 931
Score = 21.9 bits (45), Expect = 5.3, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 21/38 (55%)
Query: 7 LLVLLLVCSLQIQANPVLYEVSGPSDKLYNIDNEQNAT 44
LL+++++C A + SGP+ K ++ +E+ T
Sbjct: 50 LLIVVMMCCNTGGAAEAAEQSSGPNYKWKDVKDEEGVT 87
>M.Javanica_Scaff4412g034482 on XP_813642 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 872
Score = 21.6 bits (44), Expect = 7.0, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 5 AYLLVLLLVCSLQIQANPVLYEVSGPSDKLYNIDNEQNAT 44
A LL++++VC +A V + SGP + I+ + T
Sbjct: 47 AVLLLVVMVCCGSGEAAGVAGQPSGPQFEWRGINESDDVT 86
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5330g038963
(115 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609040 variant erythrocyte surface antigen-1, alpha subun... 28 0.096
XP_809489 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.28
XP_001609751 variant erythrocyte surface antigen-1, alpha subun... 25 1.1
XP_820450 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.1
XP_001609166 variant erythrocyte surface antigen-1, beta subuni... 25 2.0
XP_001609162 variant erythrocyte surface antigen-1, beta subuni... 25 2.0
XP_820067 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.7
XP_001609163 variant erythrocyte surface antigen-1, alpha subun... 23 4.3
XP_001609101 variant erythrocyte surface antigen-1, alpha subun... 23 4.3
XP_829782 VSG (Establishment) [Trypanosoma brucei] 23 8.3
>M.Javanica_Scaff5330g038963 on XP_001609040 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1335
Score = 28.5 bits (62), Expect = 0.096, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 5/47 (10%)
Query: 64 EKMTDDPQKRRPDITRAKEFLGWEPKVQMIEGLHKTIEYFKGELEQE 110
+++ D Q+ R D + AK+ + + I+GLHK +E K +E++
Sbjct: 752 QQIVDSGQEWRKDYSSAKDRIS-----EAIDGLHKVLEILKEGVEKQ 793
>M.Javanica_Scaff5330g038963 on XP_809489 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 787
Score = 26.9 bits (58), Expect = 0.28, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 1 VYGNGNQTRSFQYISDLITGLISLMESNTT 30
V NG + R F + DL GL+ + S +T
Sbjct: 221 VESNGKKRREFGVVGDLTKGLVGFLSSTST 250
>M.Javanica_Scaff5330g038963 on XP_001609751 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1298
Score = 25.4 bits (54), Expect = 1.1, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 93 IEGLHKTIEYFKGELEQEK 111
I+GLHK +E FK EQ++
Sbjct: 744 IDGLHKVLEIFKKWAEQDE 762
>M.Javanica_Scaff5330g038963 on XP_820450 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 724
Score = 25.4 bits (54), Expect = 1.1, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 2 YGNGNQTRSFQYISDLITGLISLMESNTTL--PVNIGNPEEYSIL 44
Y + T SF Y SD++ G ++ ES +L +N G +++L
Sbjct: 126 YNPSSATESFVYHSDIVAGYVNAAESWPSLVAEINDGTWRAHTVL 170
>M.Javanica_Scaff5330g038963 on XP_001609166 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1161
Score = 24.6 bits (52), Expect = 2.0, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 80 AKEFLGWEPKVQMIEGLHKTIEYFKGELEQ 109
A +L W V +IEG +E KGE +Q
Sbjct: 886 AGTYLSW--LVYLIEGFRTGLEGLKGEFQQ 913
>M.Javanica_Scaff5330g038963 on XP_001609162 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1166
Score = 24.6 bits (52), Expect = 2.0, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 80 AKEFLGWEPKVQMIEGLHKTIEYFKGELEQ 109
A +L W V +IEG +E KGE +Q
Sbjct: 920 AGTYLSW--LVYLIEGFRTGLEGLKGEFQQ 947
>M.Javanica_Scaff5330g038963 on XP_820067 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 722
Score = 23.5 bits (49), Expect = 3.7, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 2 YGNGNQTRSFQYISDLITGLISLMESNTTL--PVNIGNPEEYSIL 44
Y T +F Y SD++ G ++ ES +L +N G +++L
Sbjct: 127 YNPSGATETFVYHSDIVAGYVNAAESWPSLVAEINDGTWRAHTVL 171
>M.Javanica_Scaff5330g038963 on XP_001609163 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1360
Score = 23.5 bits (49), Expect = 4.3, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 85 GWEPKVQMIEGLHKTIEYFKGELEQEK 111
G + KV+ +E + KT+E K +LE+ K
Sbjct: 732 GVKEKVKALEEIKKTLEAAKEKLEEAK 758
>M.Javanica_Scaff5330g038963 on XP_001609101 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1359
Score = 23.5 bits (49), Expect = 4.3, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 85 GWEPKVQMIEGLHKTIEYFKGELEQEK 111
G + KV+ +E + KT+E K +LE+ K
Sbjct: 732 GVKEKVKALEEIKKTLEAAKEKLEEAK 758
>M.Javanica_Scaff5330g038963 on XP_829782 VSG (Establishment) [Trypanosoma brucei]
Length = 497
Score = 22.7 bits (47), Expect = 8.3, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 50 VKNLIGGSSKIIHTEKMTDDPQ 71
VK + GG K + E +TD P+
Sbjct: 363 VKKIDGGKPKEVKIETLTDPPE 384
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5594g040151
(70 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff436g006251
(93 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001608664 variant erythrocyte surface antigen-1, beta subuni... 26 0.29
XP_001611146 variant erythrocyte surface antigen-1, beta subuni... 25 0.56
XP_001611737 variant erythrocyte surface antigen-1, beta subuni... 25 1.1
XP_001609566 variant erythrocyte surface antigen-1, beta subuni... 24 1.5
XP_001610496 variant erythrocyte surface antigen-1, beta subuni... 24 2.0
>M.Javanica_Scaff436g006251 on XP_001608664 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1116
Score = 26.2 bits (56), Expect = 0.29, Method: Composition-based stats.
Identities = 8/11 (72%), Positives = 9/11 (81%)
Query: 8 PGFPGPGPSRS 18
PGFPGP P R+
Sbjct: 64 PGFPGPSPRRN 74
>M.Javanica_Scaff436g006251 on XP_001611146 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 958
Score = 25.4 bits (54), Expect = 0.56, Method: Composition-based stats.
Identities = 8/10 (80%), Positives = 8/10 (80%)
Query: 8 PGFPGPGPSR 17
PGFPGP P R
Sbjct: 64 PGFPGPHPDR 73
>M.Javanica_Scaff436g006251 on XP_001611737 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1139
Score = 24.6 bits (52), Expect = 1.1, Method: Composition-based stats.
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 6 RIPGFPGPGPSRS 18
R PG PGP P R+
Sbjct: 71 RCPGSPGPSPKRN 83
>M.Javanica_Scaff436g006251 on XP_001609566 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1062
Score = 24.3 bits (51), Expect = 1.5, Method: Composition-based stats.
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 6 RIPGFPGPGPSRS 18
R PG PGP P R+
Sbjct: 64 RSPGTPGPSPERN 76
>M.Javanica_Scaff436g006251 on XP_001610496 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1159
Score = 23.9 bits (50), Expect = 2.0, Method: Composition-based stats.
Identities = 8/12 (66%), Positives = 8/12 (66%)
Query: 6 RIPGFPGPGPSR 17
R PG PGP P R
Sbjct: 69 RSPGSPGPSPKR 80
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3057g026883
(102 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_846885 VSG (Establishment) [Trypanosoma brucei] 23 5.1
>M.Javanica_Scaff3057g026883 on XP_846885 VSG (Establishment) [Trypanosoma brucei]
Length = 525
Score = 22.7 bits (47), Expect = 5.1, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 16/35 (45%)
Query: 28 QNDVNERPQVLTDAEDFYAVDEKRVPHPGSTWRQQ 62
Q + E P+ D+ + + + G+ WR+Q
Sbjct: 42 QRPIPELPETQQATTDYQEIQKLNISLSGTDWRKQ 76
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff752g009568
(90 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_847561 VSG (Establishment) [Trypanosoma brucei] 25 0.68
XP_847559 VSG (Establishment) [Trypanosoma brucei] 25 0.72
XP_802286 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.3
XP_829797 VSG (Establishment) [Trypanosoma brucei] 23 2.4
XP_818708 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.0
XP_829786 VSG (Establishment) [Trypanosoma brucei] 23 4.9
XP_803413 VSG (Establishment) [Trypanosoma brucei] 23 5.1
XP_829791 VSG (Establishment) [Trypanosoma brucei] 23 5.2
XP_845140 VSG (Establishment) [Trypanosoma brucei] 22 6.7
XP_001347288 PfEMP1 (Establishment) [Plasmodium falciparum] 22 6.9
XP_827742 VSG (Establishment) [Trypanosoma brucei] 22 7.2
XP_001349434 PfEMP1 (Establishment) [Plasmodium falciparum] 22 7.4
>M.Javanica_Scaff752g009568 on XP_847561 VSG (Establishment) [Trypanosoma brucei]
Length = 361
Score = 25.0 bits (53), Expect = 0.68, Method: Composition-based stats.
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 44 CNCDCDKCDRSKDRFCCKN 62
C C D+ R K + CC+N
Sbjct: 195 CLCATDRKSRRKTKLCCEN 213
>M.Javanica_Scaff752g009568 on XP_847559 VSG (Establishment) [Trypanosoma brucei]
Length = 361
Score = 25.0 bits (53), Expect = 0.72, Method: Composition-based stats.
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 44 CNCDCDKCDRSKDRFCCKN 62
C C D+ R K + CC+N
Sbjct: 195 CLCATDRKSRRKTKLCCEN 213
>M.Javanica_Scaff752g009568 on XP_802286 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 461
Score = 24.3 bits (51), Expect = 1.3, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 14/32 (43%)
Query: 52 DRSKDRFCCKNEKLFGGDCSKYGGWFSDKRKR 83
DR CC +K+ G G FSDK R
Sbjct: 262 DRPTSTPCCATDKITAGLVGFLSGNFSDKTWR 293
>M.Javanica_Scaff752g009568 on XP_829797 VSG (Establishment) [Trypanosoma brucei]
Length = 509
Score = 23.5 bits (49), Expect = 2.4, Method: Composition-based stats.
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 20 DKTNGYCCKVNGFVGYP 36
DKT G C K G+ G P
Sbjct: 314 DKTQGICIKYAGYDGTP 330
>M.Javanica_Scaff752g009568 on XP_818708 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 929
Score = 23.1 bits (48), Expect = 3.0, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 60 CKNEKLFGGDCSKYGGWFSDKRKR 83
CKN K+ G + G FSDK R
Sbjct: 507 CKNTKITDGLVGFFSGNFSDKTWR 530
>M.Javanica_Scaff752g009568 on XP_829786 VSG (Establishment) [Trypanosoma brucei]
Length = 482
Score = 22.7 bits (47), Expect = 4.9, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 45 NCDCDKCDRSKDRFCCKNEK 64
NCD KC +K+ CK +K
Sbjct: 443 NCDTTKCTWNKEENECKVKK 462
>M.Javanica_Scaff752g009568 on XP_803413 VSG (Establishment) [Trypanosoma brucei]
Length = 486
Score = 22.7 bits (47), Expect = 5.1, Method: Composition-based stats.
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 45 NCDCDKCDRSKDRFCCK 61
NCD KCD + ++ CK
Sbjct: 446 NCDKTKCDWNAEKKQCK 462
>M.Javanica_Scaff752g009568 on XP_829791 VSG (Establishment) [Trypanosoma brucei]
Length = 506
Score = 22.7 bits (47), Expect = 5.2, Method: Composition-based stats.
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 45 NCDCDKCDRSKDRFCCK 61
NCD KC +K++ CK
Sbjct: 467 NCDTTKCTWNKEKNECK 483
>M.Javanica_Scaff752g009568 on XP_845140 VSG (Establishment) [Trypanosoma brucei]
Length = 533
Score = 22.3 bits (46), Expect = 6.7, Method: Composition-based stats.
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 49 DKCDRSKDRFCCKNEK 64
++C KD+ C+N+K
Sbjct: 458 NRCTAHKDKLACENDK 473
>M.Javanica_Scaff752g009568 on XP_001347288 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2241
Score = 22.3 bits (46), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 38 HCNIFGCNCDCDKCDRSKDRFCCK-NEKLFGGDCSKYGGWFSDKRKRSLQLIN 89
+C++ GC+C R K R+ + + LF C +Y W ++RK+ L+ N
Sbjct: 346 YCSLNGCDCTKTVRARGKLRYGNRCTDCLFA--CHRYENWIDNQRKQFLKQRN 396
>M.Javanica_Scaff752g009568 on XP_827742 VSG (Establishment) [Trypanosoma brucei]
Length = 505
Score = 21.9 bits (45), Expect = 7.2, Method: Composition-based stats.
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 46 CDCDKCDRSKDRFCCK 61
CD KCD +K++ CK
Sbjct: 466 CDKTKCDWNKEKNECK 481
>M.Javanica_Scaff752g009568 on XP_001349434 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2109
Score = 22.3 bits (46), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Query: 3 YYYFIYITFIFILFSSVDKTNGYCCKVNGFVGYPPHCNIFGCNCDCD 49
YY F Y + I +L SVD + K+N + GCN +CD
Sbjct: 589 YYSFFYGSIIDMLKDSVD----WRDKLNNCINNETKACKNGCNKNCD 631
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6409g043797
(78 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_821712 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.0
XP_001350413 PfEMP1 (Establishment) [Plasmodium falciparum] 22 4.8
>M.Javanica_Scaff6409g043797 on XP_821712 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 905
Score = 22.7 bits (47), Expect = 3.0, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 18/29 (62%)
Query: 2 KNYFILIIILLYSMAVIIAEINMGMNGDG 30
KN+ +L+ L S ++ +++ GM+ DG
Sbjct: 260 KNFSLLMYTLDTSRNIVTCKLSKGMSADG 288
>M.Javanica_Scaff6409g043797 on XP_001350413 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2860
Score = 22.3 bits (46), Expect = 4.8, Method: Composition-based stats.
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 60 NNCDSGNCPYWRRI 73
NN DSG+C +R++
Sbjct: 118 NNSDSGSCAPYRKL 131
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff292g004501
(149 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff26368g092249
(198 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349737 PfEMP1 (Establishment) [Plasmodium falciparum] 30 0.085
XP_821898 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 8.6
>M.Javanica_Scaff26368g092249 on XP_001349737 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2199
Score = 30.0 bits (66), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 89 QKIFKELQFNNPGRQLVESLSTDGLTEYATNRPKRNKNRNKTTNE-GFFSIFIG 141
QK F + + GR L +S+ G N PKR K RN+ ++ G F +IG
Sbjct: 653 QKTFHDFFYFWIGRFLNDSMYWRGKVNSCINNPKRKKCRNECKDDCGCFKEWIG 706
>M.Javanica_Scaff26368g092249 on XP_821898 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 846
Score = 23.9 bits (50), Expect = 8.6, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 48 EDELSTNARTLIEQIASASEAGCSTQSISEELV 80
++ +S TL+ Q + SE C+T I++ LV
Sbjct: 499 DESVSQLCTTLLAQKVALSEIACTTDKITDGLV 531
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff28318g094908
(81 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001611365 variant erythrocyte surface antigen-1, alpha subun... 28 0.041
XP_001610196 variant erythrocyte surface antigen-1, alpha subun... 28 0.047
XP_001611900 variant erythrocyte surface antigen-1, alpha subun... 28 0.069
XP_001608670 variant erythrocyte surface antigen-1, alpha subun... 27 0.079
XP_001608668 variant erythrocyte surface antigen-1, alpha subun... 27 0.11
XP_001608665 variant erythrocyte surface antigen-1, alpha subun... 26 0.28
XP_001609167 variant erythrocyte surface antigen-1, alpha subun... 26 0.31
XP_001609163 variant erythrocyte surface antigen-1, alpha subun... 25 0.38
XP_001609666 variant erythrocyte surface antigen-1, alpha subun... 25 0.41
XP_001609101 variant erythrocyte surface antigen-1, alpha subun... 25 0.41
XP_001611901 variant erythrocyte surface antigen-1, alpha subun... 25 0.47
XP_001609618 variant erythrocyte surface antigen-1, alpha subun... 25 0.79
AAZ73240 ROP5 (Establishment) [Toxoplasma gondii] 24 0.94
XP_001609540 variant erythrocyte surface antigen-1, alpha subun... 24 1.5
XP_001610567 variant erythrocyte surface antigen-1, alpha subun... 23 2.0
XP_001609040 variant erythrocyte surface antigen-1, alpha subun... 22 4.4
XP_813429 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.6
XP_817310 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.7
>M.Javanica_Scaff28318g094908 on XP_001611365 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1335
Score = 28.1 bits (61), Expect = 0.041, Method: Composition-based stats.
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 55 CRNPRCPRCPATSSTSSKNPNIATC 79
C +P+CP C + S+ + P C
Sbjct: 846 CNSPKCPSCKSHSNKCGRQPQSKYC 870
>M.Javanica_Scaff28318g094908 on XP_001610196 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1330
Score = 28.1 bits (61), Expect = 0.047, Method: Composition-based stats.
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 55 CRNPRCPRCPATSSTSSKNPNIATC 79
C +P+CP C + S+ + P C
Sbjct: 840 CNSPKCPSCKSHSNKCGRQPQSKYC 864
>M.Javanica_Scaff28318g094908 on XP_001611900 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1226
Score = 27.7 bits (60), Expect = 0.069, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 55 CRNPRCPRCPATSSTSSKNPNIATC 79
C +P+CP C + SS + P + C
Sbjct: 843 CTSPKCPPCESHSSKCGQKPVSSYC 867
>M.Javanica_Scaff28318g094908 on XP_001608670 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1320
Score = 27.3 bits (59), Expect = 0.079, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Query: 55 CRNPRCPRCPATSSTSSK--NPNIATCC 80
C +P+CP C + S+ K P I C
Sbjct: 841 CNSPKCPSCKSHSTKCGKEGKPTICKTC 868
>M.Javanica_Scaff28318g094908 on XP_001608668 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1337
Score = 26.9 bits (58), Expect = 0.11, Method: Composition-based stats.
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 57 NPRCPRCPATSSTSSKNPNIATC 79
+P+CP C + S+ + P TC
Sbjct: 881 SPKCPSCESHSTKCGQQPQSKTC 903
>M.Javanica_Scaff28318g094908 on XP_001608665 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1326
Score = 25.8 bits (55), Expect = 0.28, Method: Composition-based stats.
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 55 CRNPRCPRCPATSSTSSKNPNIATC 79
C +P+CP C S + P C
Sbjct: 865 CTSPKCPGCTKHSEKCGRQPQSKYC 889
>M.Javanica_Scaff28318g094908 on XP_001609167 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1317
Score = 25.8 bits (55), Expect = 0.31, Method: Composition-based stats.
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 55 CRNPRCPRCPATSSTSSKNPNIATC 79
C +P+CP C S + P C
Sbjct: 840 CNSPKCPGCTKHSDKCGQPPKPTVC 864
>M.Javanica_Scaff28318g094908 on XP_001609163 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1360
Score = 25.4 bits (54), Expect = 0.38, Method: Composition-based stats.
Identities = 8/25 (32%), Positives = 10/25 (40%)
Query: 55 CRNPRCPRCPATSSTSSKNPNIATC 79
C P+CP C S + P C
Sbjct: 876 CNTPKCPGCTKHSDKCGQPPKPTVC 900
>M.Javanica_Scaff28318g094908 on XP_001609666 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1269
Score = 25.4 bits (54), Expect = 0.41, Method: Composition-based stats.
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 55 CRNPRCPRCPATSSTSSKNPNIATC 79
C +P+CP C + K N C
Sbjct: 779 CNSPKCPPCHEHAKKCGKQSNPTVC 803
>M.Javanica_Scaff28318g094908 on XP_001609101 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1359
Score = 25.4 bits (54), Expect = 0.41, Method: Composition-based stats.
Identities = 8/25 (32%), Positives = 10/25 (40%)
Query: 55 CRNPRCPRCPATSSTSSKNPNIATC 79
C P+CP C S + P C
Sbjct: 876 CNTPKCPGCTKHSDKCGQPPKPTVC 900
>M.Javanica_Scaff28318g094908 on XP_001611901 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1211
Score = 25.4 bits (54), Expect = 0.47, Method: Composition-based stats.
Identities = 9/28 (32%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Query: 55 CRNPRCPRCPATSSTSSK--NPNIATCC 80
C +P+CP C S+ + NP + C
Sbjct: 837 CNSPKCPGCTKHSNKCGQPSNPTVCPAC 864
>M.Javanica_Scaff28318g094908 on XP_001609618 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1325
Score = 24.6 bits (52), Expect = 0.79, Method: Composition-based stats.
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 55 CRNPRCPRCPATSSTSSKNPNIATC 79
C +P+C C S+ K P C
Sbjct: 841 CNSPKCSGCTKHSTKCGKKPESKYC 865
>M.Javanica_Scaff28318g094908 on AAZ73240 ROP5 (Establishment) [Toxoplasma gondii]
Length = 255
Score = 24.3 bits (51), Expect = 0.94, Method: Composition-based stats.
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 59 RCPRCPATSSTSSKNPNI 76
R PR PA+S+T+S + I
Sbjct: 76 RVPRVPASSTTTSASEGI 93
>M.Javanica_Scaff28318g094908 on XP_001609540 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1349
Score = 23.9 bits (50), Expect = 1.5, Method: Composition-based stats.
Identities = 7/25 (28%), Positives = 11/25 (44%)
Query: 55 CRNPRCPRCPATSSTSSKNPNIATC 79
C +P+CP C S+ + C
Sbjct: 863 CNSPKCPGCTKHSTKCGQKAESTIC 887
>M.Javanica_Scaff28318g094908 on XP_001610567 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1315
Score = 23.5 bits (49), Expect = 2.0, Method: Composition-based stats.
Identities = 7/25 (28%), Positives = 11/25 (44%)
Query: 55 CRNPRCPRCPATSSTSSKNPNIATC 79
C +P+CP C S+ + C
Sbjct: 830 CNSPKCPTCDQHSTKCGQQGTPTMC 854
>M.Javanica_Scaff28318g094908 on XP_001609040 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1335
Score = 22.3 bits (46), Expect = 4.4, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 17/39 (43%), Gaps = 7/39 (17%)
Query: 32 DEPKQFRVKRAKRCYNY-------NIRTHQCRNPRCPRC 63
DE K V + + Y+Y N C +P+CP C
Sbjct: 814 DENKLENVLKQELSYDYTALLNAINQLISICNSPKCPPC 852
>M.Javanica_Scaff28318g094908 on XP_813429 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 818
Score = 22.3 bits (46), Expect = 4.6, Method: Composition-based stats.
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 67 SSTSSKNPNIATCC 80
+ST++KNP+ T C
Sbjct: 480 TSTAAKNPSTGTAC 493
>M.Javanica_Scaff28318g094908 on XP_817310 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 904
Score = 22.3 bits (46), Expect = 4.7, Method: Composition-based stats.
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 67 SSTSSKNPNIATCC 80
+ST++KNP+ T C
Sbjct: 504 TSTAAKNPSTGTAC 517
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5116g037916
(147 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_810383 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.9
XP_820499 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.1
XP_829788 VSG (Establishment) [Trypanosoma brucei] 23 6.6
XP_001349032 PfEMP1 (Establishment) [Plasmodium falciparum] 23 7.2
>M.Javanica_Scaff5116g037916 on XP_810383 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 928
Score = 24.3 bits (51), Expect = 3.9, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 8/57 (14%)
Query: 11 LILTFLTKINSNPAPNPSPLFGISIGRLQSSGVEGYLTCEGKPAANVLVKLYDDDRG 67
LI + +N N P P P+ G + G L S +G+P ++ +KL ++D G
Sbjct: 712 LISAEIDALNPNKLPIPPPVGGSAQGTLLQS------PSDGQPLSD--LKLLNEDEG 760
>M.Javanica_Scaff5116g037916 on XP_820499 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 654
Score = 23.9 bits (50), Expect = 5.1, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 111 MIPDKYITAGKKPDKYYDAGTIELEGKFKGEER 143
M+ KY G D+ D G + + G G+ER
Sbjct: 197 MLAGKYSNKGASDDQAGDWGLLLVRGNVSGKER 229
>M.Javanica_Scaff5116g037916 on XP_829788 VSG (Establishment) [Trypanosoma brucei]
Length = 473
Score = 23.5 bits (49), Expect = 6.6, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 12 ILTFLTKINSNPAPNPSPLFGISIGRLQSSGVEG 45
+ TF + I S P+ + + +G QS+G +G
Sbjct: 276 LATFFSHIGSLPSSHSNAAVRFVLGEAQSTGCQG 309
>M.Javanica_Scaff5116g037916 on XP_001349032 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2267
Score = 23.5 bits (49), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 121 KKPDKYYDAGTIELEGKFKGEERDC 145
+K KY D GK++GEER C
Sbjct: 326 RKKKKYVDIVKTYCRGKYQGEERYC 350
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3882g031700
(514 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_817877 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 6.8
XP_805203 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 8.5
>M.Javanica_Scaff3882g031700 on XP_817877 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 900
Score = 25.8 bits (55), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 56/139 (40%), Gaps = 20/139 (14%)
Query: 32 IIPKAIINEFPQEKNRIPLRDPFRNVHWKAKDGENVNNRGPFYGQPEQ-VHLSYGGDPSR 90
++ I++ P + IPL + K D EN G Y ++ + L YGG+
Sbjct: 582 LVATVSIDKVPTREGPIPL------MGVKMSDAENPVRLGLSYNNKKKWLLLCYGGENKE 635
Query: 91 IFITWLTFDDTIESIVEYWVDSIQNLKRVEAKMDYFDDGGINKVRRYTHRALLEGISPGI 150
+ ITW +IV +QN K+ A +D GG + + + + I
Sbjct: 636 LSITWQPGKKHQLAIV------LQNGKQGSAYVDGKRVGGDEQCKLENTESKV------I 683
Query: 151 RYFYRVGSQYGWSSIFSFV 169
+FY +G G + I V
Sbjct: 684 SHFY-IGGDGGSAEIQEGV 701
>M.Javanica_Scaff3882g031700 on XP_805203 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 844
Score = 25.4 bits (54), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 165 IFSFVGLEERPDGGYRFAVYGDMGNV 190
+FS + + E+ DG Y +Y D G+
Sbjct: 296 VFSLMAMNEKNDGVYSMIIYSDNGST 321
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7686g049067
(717 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAB63303 MIC2 (Invasion) [Toxoplasma gondii] 51 6e-08
AAD03350 MIC1 (Adhesin) [Eimeria tenella] 46 3e-06
AAW78158 TRAP (Invasion) [Plasmodium falciparum] 39 0.001
AAW78139 TRAP (Invasion) [Plasmodium falciparum] 39 0.001
AAW78150 TRAP (Invasion) [Plasmodium falciparum] 39 0.001
AAW78175 TRAP (Invasion) [Plasmodium falciparum] 38 0.001
AAW78156 TRAP (Invasion) [Plasmodium falciparum] 37 0.002
AAW78153 TRAP (Invasion) [Plasmodium falciparum] 37 0.003
AAW78167 TRAP (Invasion) [Plasmodium falciparum] 37 0.003
AAQ11894 TRAP (Invasion) [Plasmodium falciparum] 37 0.003
AAQ11891 TRAP (Invasion) [Plasmodium falciparum] 37 0.004
AAW78146 TRAP (Invasion) [Plasmodium falciparum] 37 0.005
AAW78147 TRAP (Invasion) [Plasmodium falciparum] 37 0.005
AAW78166 TRAP (Invasion) [Plasmodium falciparum] 37 0.005
AAW78169 TRAP (Invasion) [Plasmodium falciparum] 37 0.005
AAW78138 TRAP (Invasion) [Plasmodium falciparum] 37 0.005
AAW78171 TRAP (Invasion) [Plasmodium falciparum] 37 0.005
AAW78152 TRAP (Invasion) [Plasmodium falciparum] 37 0.005
AAW78134 TRAP (Invasion) [Plasmodium falciparum] 37 0.005
AAW78130 TRAP (Invasion) [Plasmodium falciparum] 36 0.005
AAW78154 TRAP (Invasion) [Plasmodium falciparum] 36 0.005
AAW78172 TRAP (Invasion) [Plasmodium falciparum] 36 0.006
AAA29778 TRAP (Invasion) [Plasmodium falciparum] 36 0.006
AAA29772 TRAP (Invasion) [Plasmodium falciparum] 36 0.006
AAW78173 TRAP (Invasion) [Plasmodium falciparum] 36 0.006
AAW78148 TRAP (Invasion) [Plasmodium falciparum] 36 0.007
AAW78131 TRAP (Invasion) [Plasmodium falciparum] 36 0.007
AAW78137 TRAP (Invasion) [Plasmodium falciparum] 36 0.007
AAW78163 TRAP (Invasion) [Plasmodium falciparum] 36 0.007
AAA29774 TRAP (Invasion) [Plasmodium falciparum] 36 0.007
AAW78177 TRAP (Invasion) [Plasmodium falciparum] 36 0.007
AAA29777 TRAP (Invasion) [Plasmodium falciparum] 36 0.007
AAW78174 TRAP (Invasion) [Plasmodium falciparum] 36 0.007
AAA29776 TRAP (Invasion) [Plasmodium falciparum] 36 0.007
AAQ11895 TRAP (Invasion) [Plasmodium falciparum] 36 0.008
AAW78149 TRAP (Invasion) [Plasmodium falciparum] 36 0.008
AAW78151 TRAP (Invasion) [Plasmodium falciparum] 36 0.008
AAW78133 TRAP (Invasion) [Plasmodium falciparum] 36 0.008
AAW78164 TRAP (Invasion) [Plasmodium falciparum] 36 0.008
AAW78144 TRAP (Invasion) [Plasmodium falciparum] 36 0.008
AAA29770 TRAP (Invasion) [Plasmodium falciparum] 36 0.008
AAQ11892 TRAP (Invasion) [Plasmodium falciparum] 35 0.010
AAA29775 TRAP (Invasion) [Plasmodium falciparum] 35 0.010
AAW78168 TRAP (Invasion) [Plasmodium falciparum] 35 0.011
AAW78160 TRAP (Invasion) [Plasmodium falciparum] 35 0.013
AAW78159 TRAP (Invasion) [Plasmodium falciparum] 35 0.013
AAW78176 TRAP (Invasion) [Plasmodium falciparum] 35 0.014
AAW78157 TRAP (Invasion) [Plasmodium falciparum] 35 0.015
AAW78132 TRAP (Invasion) [Plasmodium falciparum] 35 0.015
AAW78165 TRAP (Invasion) [Plasmodium falciparum] 35 0.015
AAW78161 TRAP (Invasion) [Plasmodium falciparum] 35 0.016
AAW78141 TRAP (Invasion) [Plasmodium falciparum] 35 0.017
AAA29771 TRAP (Invasion) [Plasmodium falciparum] 34 0.025
AAA29773 TRAP (Invasion) [Plasmodium falciparum] 34 0.029
AAW78135 TRAP (Invasion) [Plasmodium falciparum] 33 0.043
AAW78162 TRAP (Invasion) [Plasmodium falciparum] 32 0.092
AAW78136 TRAP (Invasion) [Plasmodium falciparum] 32 0.15
XP_001351221 CTRP (Adhesin) [Plasmodium falciparum] 31 0.26
XP_819490 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 3.8
XP_821102 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 4.1
AAX07966 alpha-19 giardin (Others) [Giardia duodenalis] 27 4.4
XP_807986 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 7.4
XP_807279 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 9.2
>M.Javanica_Scaff7686g049067 on AAB63303 MIC2 (Invasion) [Toxoplasma gondii]
Length = 255
Score = 51.2 bits (121), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 76/161 (47%), Gaps = 25/161 (15%)
Query: 39 IDLLFLLDGSGSVGGNTFQTQMEILDKLIDILEIGPGQN-----------------QSQL 81
+D+ FL+D SGS+G F+ + L + +L IGP + QS
Sbjct: 75 LDICFLIDSSGSIGIQNFRLVKQFLHTFLMVLPIGPEEVNNAVVTYSTDVHLQWDLQSPN 134
Query: 82 AVMHQL-RQALQRIRHKSGTTKTGKALEKAIQLYKDKSSGARFG--NVAKVVVVVSDGRS 138
AV QL A+ + +K G+T T L+ Q+ +G+R G +V K+V+ ++DG S
Sbjct: 135 AVDKQLAAHAVLEMPYKKGSTNTSDGLKACKQIL---FTGSRPGREHVPKLVIGMTDGES 191
Query: 139 LDD--PVPTAIRLRQTGVFLISLGIGTHVNLAELLQMSGDS 177
D V A +R+ G + L +G +V +E M G S
Sbjct: 192 DSDFRTVRAAKEIRELGGIVTVLAVGHYVKHSECRSMCGCS 232
>M.Javanica_Scaff7686g049067 on AAD03350 MIC1 (Adhesin) [Eimeria tenella]
Length = 255
Score = 45.8 bits (107), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 82/160 (51%), Gaps = 23/160 (14%)
Query: 39 IDLLFLLDGSGSVGGNTFQTQMEILDKLIDILEIGPGQNQSQL---AVMHQLR------- 88
+D++ ++D SGS+G + F+ + ++ ++ + I P + L A ++R
Sbjct: 49 LDVMLVVDESGSIGTSNFRKVRQFIEDFVNSMPISPEDVRVGLITFATRSKVRWNLSDPK 108
Query: 89 --------QALQRIRHKSGTTKTGKALEKAIQLYKDKSSGARFGNVAKVVVVVSDGRSLD 140
A + + + +G T T L+ A +L D ++GAR NV K+V+V++DG S +
Sbjct: 109 ATNPSLAISAARSLSYSTGVTYTHYGLQDAKKLLYDTNAGAR-NNVPKLVLVMTDGAS-N 166
Query: 141 DPVPT---AIRLRQTGVFLISLGIGTHVNLAELLQMSGDS 177
P T A LR G ++ LG+G+ VN +E ++G S
Sbjct: 167 LPSQTRSSAAALRDAGAIVVVLGVGSGVNSSECRSIAGCS 206
>M.Javanica_Scaff7686g049067 on AAW78158 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 82/194 (42%), Gaps = 34/194 (17%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFEYIPENDLAKICRPVNRPIDLLFLLDGSGSVG-GNTF 56
+ FL+F F ++ +Q ++ E L ++C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEI---KYLEEVC---NDQVDLYLLMDCSGSIRRHNWV 65
Query: 57 QTQMEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIR-HKSGTTKTGKAL-------- 107
+ + + KLI L + N L V A + IR H + KAL
Sbjct: 66 KHAVPLAMKLIQQLNLN--DNAIHLYVNVFSNNAKEIIRLHSDASKNKEKALIIIKSLLS 123
Query: 108 -----------EKAIQLYKDKSSGARFGNVAKVVVVVSDG--RSLDDPVPTAIRLRQTGV 154
+ +Q+ K + N ++VV+++DG S+ D + + +L GV
Sbjct: 124 TNLPYGKTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPDSIQDSLKESRKLNDLGV 183
Query: 155 FLISLGIGTHVNLA 168
+ GIG +N+A
Sbjct: 184 KIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAW78139 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 40/197 (20%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFEYIPENDLAKICRPVNRPIDLLFLLDGSGSVG-GNTF 56
+ FL+F F ++ +Q ++ E L ++C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEI---KYLEEVC---NDQVDLYLLMDCSGSIRRHNWV 65
Query: 57 QTQMEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIRHKSGTTKTGKALEKAIQLYKD 116
+ + + KLI L + N L V A + IR S +K EKA+ + K
Sbjct: 66 KHAVPLAMKLIQQLNLN--DNAIHLYVNVFSNNAREIIRLHSDASKNK---EKALSIIKS 120
Query: 117 K-SSGARFG----------------------NVAKVVVVVSDG--RSLDDPVPTAIRLRQ 151
S+ FG N ++VV+++DG S+ D + + +L
Sbjct: 121 LLSTNLPFGRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPDSIQDSLKESRKLSD 180
Query: 152 TGVFLISLGIGTHVNLA 168
GV + GIG +N+A
Sbjct: 181 RGVKIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAW78150 TRAP (Invasion) [Plasmodium falciparum]
Length = 569
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 82/194 (42%), Gaps = 34/194 (17%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFEYIPENDLAKICRPVNRPIDLLFLLDGSGSVG-GNTF 56
+ FL+F F ++ +Q ++ E L ++C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEI---KYLEEVC---NDQVDLYLLMDCSGSIRRHNWV 65
Query: 57 QTQMEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIR-HKSGTTKTGKAL-------- 107
+ + + KLI L + N L V A + IR H + KAL
Sbjct: 66 KHAVPLAMKLIQQLNLN--DNAIHLYVNVFSNNAKEIIRLHSDASKNKEKALIIIKSLLS 123
Query: 108 -----------EKAIQLYKDKSSGARFGNVAKVVVVVSDG--RSLDDPVPTAIRLRQTGV 154
+ +Q+ K + N ++VV+++DG S+ D + + +L GV
Sbjct: 124 TNLPYGKTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPDSIQDSLKESRKLNDLGV 183
Query: 155 FLISLGIGTHVNLA 168
+ GIG +N+A
Sbjct: 184 KIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAW78175 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 81/194 (41%), Gaps = 34/194 (17%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFEYIPENDLAKICRPVNRPIDLLFLLDGSGSVG-GNTF 56
+ FL+F F ++ +Q ++ E L ++C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEI---KYLEEVC---NDQVDLYLLMDCSGSIRRHNWV 65
Query: 57 QTQMEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIR-HKSGTTKTGKAL-------- 107
+ + KLI L + N L V A + IR H + KAL
Sbjct: 66 NHAVPLAMKLIQQLNLN--DNAIHLYVNVFSNNAREIIRLHSDASKNKEKALIIIKSLLS 123
Query: 108 -----------EKAIQLYKDKSSGARFGNVAKVVVVVSDG--RSLDDPVPTAIRLRQTGV 154
+ +Q+ K + N ++VV+++DG S+ D + + +L GV
Sbjct: 124 TNLPYGRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPDSIQDSLKESRKLSDRGV 183
Query: 155 FLISLGIGTHVNLA 168
+ GIG +N+A
Sbjct: 184 KIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAW78156 TRAP (Invasion) [Plasmodium falciparum]
Length = 581
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 83/196 (42%), Gaps = 38/196 (19%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFE--YIPENDLAKICRPVNRPIDLLFLLDGSGSVG-GN 54
+ FL+F F ++ +Q ++ E Y E +C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEIKYREE-----VC---NDQVDLYLLMDCSGSIRRHN 63
Query: 55 TFQTQMEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIR-HKSGTTKTGKAL------ 107
+ + + KLI L + +N L V A + IR H + KAL
Sbjct: 64 WVKHAVPLAMKLIQQLNLN--ENAIHLYVNVFSNNAKEIIRLHSDASKNKEKALIIIRSL 121
Query: 108 -------------EKAIQLYKDKSSGARFGNVAKVVVVVSDG--RSLDDPVPTAIRLRQT 152
+ +Q+ K + N ++VV+++DG S+ D + + +L
Sbjct: 122 LSTNLPYGKTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPDSIQDSLKESRKLSDR 181
Query: 153 GVFLISLGIGTHVNLA 168
GV + GIG +N+A
Sbjct: 182 GVKIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAW78153 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 82/196 (41%), Gaps = 38/196 (19%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFE--YIPENDLAKICRPVNRPIDLLFLLDGSGSVGGNT 55
+ FL+F F ++ +Q ++ E Y E +C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEIKYREE-----VC---NDEVDLYLLMDCSGSIRRNN 63
Query: 56 FQTQ-MEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIR-HKSGTTKTGKAL------ 107
+ + + KLI L + N L V A + IR H + KAL
Sbjct: 64 WVNHAVPLAMKLIQQLNLN--DNAIHLYVNVFSNNAREIIRLHSDASKNKEKALSIIKSL 121
Query: 108 -------------EKAIQLYKDKSSGARFGNVAKVVVVVSDG--RSLDDPVPTAIRLRQT 152
+ +Q+ K + N ++VV+++DG S+ D + + +L
Sbjct: 122 LSTNLPYGRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPDSIQDSLKESRKLNDR 181
Query: 153 GVFLISLGIGTHVNLA 168
GV + GIG +N+A
Sbjct: 182 GVKIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAW78167 TRAP (Invasion) [Plasmodium falciparum]
Length = 575
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 83/196 (42%), Gaps = 38/196 (19%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFE--YIPENDLAKICRPVNRPIDLLFLLDGSGSVG-GN 54
+ FL+F F ++ +Q ++ E Y E +C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEIKYREE-----VC---NDQVDLYLLMDCSGSIRRHN 63
Query: 55 TFQTQMEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIR-HKSGTTKTGKAL------ 107
+ + + KLI L + +N L V A + IR H + KAL
Sbjct: 64 WVKHAVPLAMKLIQQLNLN--ENAIHLYVNVFSNNAKEIIRLHSDASKNKEKALIIIRSL 121
Query: 108 -------------EKAIQLYKDKSSGARFGNVAKVVVVVSDG--RSLDDPVPTAIRLRQT 152
+ +Q+ K + N ++VV+++DG S+ D + + +L
Sbjct: 122 LSTNLPYGKTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPDSIQDSLKESRKLSDR 181
Query: 153 GVFLISLGIGTHVNLA 168
GV + GIG +N+A
Sbjct: 182 GVKIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAQ11894 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 83/196 (42%), Gaps = 38/196 (19%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFE--YIPENDLAKICRPVNRPIDLLFLLDGSGSVG-GN 54
+ FL+F F ++ +Q ++ E Y E +C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEIKYREE-----VC---NDEVDLYLLMDCSGSIRRHN 63
Query: 55 TFQTQMEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIR-HKSGTTKTGKAL------ 107
+ + + KLI L + +N L V A + IR H + KAL
Sbjct: 64 WVKHAVPLAMKLIQQLNLN--ENAIHLYVNIFSNNAKEIIRLHSDASKNKEKALIIIKSL 121
Query: 108 -------------EKAIQLYKDKSSGARFGNVAKVVVVVSDG--RSLDDPVPTAIRLRQT 152
+ +Q+ K + N ++VV+++DG S+ D + + +L
Sbjct: 122 LSTNLPYGRTNLSDALLQVRKHLNDRINRENANQLVVILTDGIPDSIQDSLKESRKLNDR 181
Query: 153 GVFLISLGIGTHVNLA 168
GV + GIG +N+A
Sbjct: 182 GVKIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAQ11891 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 82/196 (41%), Gaps = 38/196 (19%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFE--YIPENDLAKICRPVNRPIDLLFLLDGSGSVG-GN 54
+ FL+F F ++ +Q ++ E Y E +C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEIKYREE-----VC---NDEVDLYLLMDCSGSIRRHN 63
Query: 55 TFQTQMEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIR-HKSGTTKTGKAL------ 107
+ + KLI L + +N L V A + IR H + KAL
Sbjct: 64 WVNHAVPLAMKLIQQLNLN--ENTIHLYVNIFSNNAKEIIRLHSDASKNKEKALIIIKSL 121
Query: 108 -------------EKAIQLYKDKSSGARFGNVAKVVVVVSDG--RSLDDPVPTAIRLRQT 152
+ +Q+ K + N ++VV+++DG S+ D + + +L
Sbjct: 122 LSTNLPYGRTNLSDALLQVRKHLNDRINRENANQLVVILTDGIPDSIQDSLKESRKLNDR 181
Query: 153 GVFLISLGIGTHVNLA 168
GV + GIG +N+A
Sbjct: 182 GVKIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAW78146 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 82/196 (41%), Gaps = 38/196 (19%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFE--YIPENDLAKICRPVNRPIDLLFLLDGSGSVG-GN 54
+ FL+F F ++ +Q ++ E Y E +C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEIKYREE-----VC---NDQVDLYLLMDCSGSIRRHN 63
Query: 55 TFQTQMEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIR-HKSGTTKTGKAL------ 107
+ + + KLI L + N L V A + IR H + KAL
Sbjct: 64 WVKHAVPLAMKLIQQLNLN--DNAIHLYVNVFSNNAKEIIRLHSDASKNKEKALIIIKSL 121
Query: 108 -------------EKAIQLYKDKSSGARFGNVAKVVVVVSDG--RSLDDPVPTAIRLRQT 152
+ +Q+ K + N ++VV+++DG S+ D + + +L
Sbjct: 122 LSTNLPYGKTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPDSIQDSLKESRKLNDL 181
Query: 153 GVFLISLGIGTHVNLA 168
GV + GIG +N+A
Sbjct: 182 GVKIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAW78147 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 82/196 (41%), Gaps = 38/196 (19%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFE--YIPENDLAKICRPVNRPIDLLFLLDGSGSVG-GN 54
+ FL+F F ++ +Q ++ E Y E +C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEIKYREE-----VC---NDQVDLYLLMDCSGSIRRHN 63
Query: 55 TFQTQMEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIR-HKSGTTKTGKAL------ 107
+ + + KLI L + N L V A + IR H + KAL
Sbjct: 64 WVKHAVPLAMKLIQQLNLN--DNAIHLYVNVFSNNAKEIIRLHSDASKNKEKALIIIKSL 121
Query: 108 -------------EKAIQLYKDKSSGARFGNVAKVVVVVSDG--RSLDDPVPTAIRLRQT 152
+ +Q+ K + N ++VV+++DG S+ D + + +L
Sbjct: 122 LSTNLPYGKTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPDSIQDSLKESRKLNDL 181
Query: 153 GVFLISLGIGTHVNLA 168
GV + GIG +N+A
Sbjct: 182 GVKIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAW78166 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 81/196 (41%), Gaps = 38/196 (19%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFE--YIPENDLAKICRPVNRPIDLLFLLDGSGSVGGNT 55
+ FL+F F ++ +Q ++ E Y E +C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEIKYREE-----VC---NDEVDLYLLMDCSGSIRRNN 63
Query: 56 FQTQ-MEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIR-HKSGTTKTGKAL------ 107
+ + + KLI L + N L A + IR H + KAL
Sbjct: 64 WVNHAVPLAMKLIQQLNLN--DNAIHLYANVFSNNAREIIRLHSDASKNKEKALIIIKSL 121
Query: 108 -------------EKAIQLYKDKSSGARFGNVAKVVVVVSDG--RSLDDPVPTAIRLRQT 152
+ +Q+ K + N ++VV+++DG S+ D + + +L
Sbjct: 122 LNTNLPFGRTNLSDALLQVRKHLNDRINRENANQLVVILTDGIPNSIQDSLKESRKLNDL 181
Query: 153 GVFLISLGIGTHVNLA 168
GV + GIG +N+A
Sbjct: 182 GVKIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAW78169 TRAP (Invasion) [Plasmodium falciparum]
Length = 551
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 81/196 (41%), Gaps = 38/196 (19%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFE--YIPENDLAKICRPVNRPIDLLFLLDGSGSVG-GN 54
+ FL+F F ++ +Q ++ E Y E +C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEIKYREE-----VC---NDEVDLYLLMDCSGSIRRHN 63
Query: 55 TFQTQMEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIR-HKSGTTKTGKAL------ 107
+ + KLI L + N L V A + IR H + KAL
Sbjct: 64 WVNHAVPLAMKLIQQLNLN--DNAIHLYVNVFSNNAREIIRLHSDASKNKEKALSIIKSL 121
Query: 108 -------------EKAIQLYKDKSSGARFGNVAKVVVVVSDG--RSLDDPVPTAIRLRQT 152
+ +Q+ K + N ++VV+++DG S+ D + + +L
Sbjct: 122 LSTNLPYGRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPDSIQDSLKESRKLNDR 181
Query: 153 GVFLISLGIGTHVNLA 168
GV + GIG +N+A
Sbjct: 182 GVKIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAW78138 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 83/199 (41%), Gaps = 44/199 (22%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFE--YIPENDLAKICRPVNRPIDLLFLLDGSGSVG-GN 54
+ FL+F F ++ +Q ++ E Y E +C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEIKYREE-----VC---NDEVDLYLLMDCSGSIRRHN 63
Query: 55 TFQTQMEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIRHKSGTTKTGKALEKAIQLY 114
+ + KLI L + N L V A + IR S +K EKA+ +
Sbjct: 64 WVNHAVPLAMKLIQQLNLN--DNAIHLYVNVFSNNAREIIRLHSDASKNK---EKALSII 118
Query: 115 KDK-SSGARFG----------------------NVAKVVVVVSDG--RSLDDPVPTAIRL 149
K S+ FG N ++VV+++DG S+ D + + +L
Sbjct: 119 KSLLSTNLPFGRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPNSIQDSLKESRKL 178
Query: 150 RQTGVFLISLGIGTHVNLA 168
GV + GIG +N+A
Sbjct: 179 SDRGVKIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAW78171 TRAP (Invasion) [Plasmodium falciparum]
Length = 551
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 81/196 (41%), Gaps = 38/196 (19%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFE--YIPENDLAKICRPVNRPIDLLFLLDGSGSVG-GN 54
+ FL+F F ++ +Q ++ E Y E +C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEIKYREE-----VC---NDEVDLYLLMDCSGSIRRHN 63
Query: 55 TFQTQMEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIR-HKSGTTKTGKAL------ 107
+ + KLI L + N L V A + IR H + KAL
Sbjct: 64 WVNHAVPLAMKLIQQLNLN--DNAIHLYVNVFSNNAREIIRLHSDASKNKEKALIIIKSL 121
Query: 108 -------------EKAIQLYKDKSSGARFGNVAKVVVVVSDG--RSLDDPVPTAIRLRQT 152
+ +Q+ K + N ++VV+++DG S+ D + + +L
Sbjct: 122 LSTNLPYGRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPDSIQDSLKESRKLNDR 181
Query: 153 GVFLISLGIGTHVNLA 168
GV + GIG +N+A
Sbjct: 182 GVKIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAW78152 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 83/199 (41%), Gaps = 44/199 (22%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFE--YIPENDLAKICRPVNRPIDLLFLLDGSGSVG-GN 54
+ FL+F F ++ +Q ++ E Y E +C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEIKYREE-----VC---NDEVDLYLLMDCSGSIRRHN 63
Query: 55 TFQTQMEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIRHKSGTTKTGKALEKAIQLY 114
+ + KLI L + N L V A + IR S +K EKA+ +
Sbjct: 64 WVNHAVPLAMKLIQQLNLN--DNAIHLYVNVFSNNAREIIRLHSDASKNK---EKALSII 118
Query: 115 KDK-SSGARFG----------------------NVAKVVVVVSDG--RSLDDPVPTAIRL 149
K S+ FG N ++VV+++DG S+ D + + +L
Sbjct: 119 KSLLSTNLPFGRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPNSIQDSLKESRKL 178
Query: 150 RQTGVFLISLGIGTHVNLA 168
GV + GIG +N+A
Sbjct: 179 SDRGVKIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAW78134 TRAP (Invasion) [Plasmodium falciparum]
Length = 551
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 81/196 (41%), Gaps = 38/196 (19%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFE--YIPENDLAKICRPVNRPIDLLFLLDGSGSVG-GN 54
+ FL+F F ++ +Q ++ E Y E +C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEIKYREE-----VC---NDEVDLYLLMDCSGSIRRHN 63
Query: 55 TFQTQMEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIR-HKSGTTKTGKAL------ 107
+ + KLI L + N L V A + IR H + KAL
Sbjct: 64 WVNHAVPLAMKLIQQLNLN--DNAIHLYVNVFSNNAREIIRLHSDASKNKEKALIIIKSL 121
Query: 108 -------------EKAIQLYKDKSSGARFGNVAKVVVVVSDG--RSLDDPVPTAIRLRQT 152
+ +Q+ K + N ++VV+++DG S+ D + + +L
Sbjct: 122 LSTNLPYGRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPDSIQDSLKESRKLNDR 181
Query: 153 GVFLISLGIGTHVNLA 168
GV + GIG +N+A
Sbjct: 182 GVKIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAW78130 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 82/196 (41%), Gaps = 38/196 (19%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFE--YIPENDLAKICRPVNRPIDLLFLLDGSGSVG-GN 54
+ FL+F F ++ +Q ++ E Y E +C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEIKYREE-----VC---NDQVDLYLLMDCSGSIRRHN 63
Query: 55 TFQTQMEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIR-HKSGTTKTGKAL------ 107
+ + + KLI L + N L V A + IR H + KAL
Sbjct: 64 WVKHAVPLAMKLIQQLNLN--DNAIHLYVNVFSNNAKEIIRLHSDASKNKEKALIIIKSL 121
Query: 108 -------------EKAIQLYKDKSSGARFGNVAKVVVVVSDG--RSLDDPVPTAIRLRQT 152
+ +Q+ K + N ++VV+++DG S+ D + + +L
Sbjct: 122 LSTNLPYGKTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPDSIQDSLKESRKLNDL 181
Query: 153 GVFLISLGIGTHVNLA 168
GV + GIG +N+A
Sbjct: 182 GVKIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAW78154 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 82/196 (41%), Gaps = 38/196 (19%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFE--YIPENDLAKICRPVNRPIDLLFLLDGSGSVG-GN 54
+ FL+F F ++ +Q ++ E Y E +C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEIKYREE-----VC---NDQVDLYLLMDCSGSIRRHN 63
Query: 55 TFQTQMEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIR-HKSGTTKTGKAL------ 107
+ + + KLI L + N L V A + IR H + KAL
Sbjct: 64 WVKHAVPLAMKLIQQLNLN--DNAIHLYVNVFSNNAKEIIRLHSDASKNKEKALIIIKSL 121
Query: 108 -------------EKAIQLYKDKSSGARFGNVAKVVVVVSDG--RSLDDPVPTAIRLRQT 152
+ +Q+ K + N ++VV+++DG S+ D + + +L
Sbjct: 122 LSTNLPYGKTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPDSIQDSLKESRKLNDL 181
Query: 153 GVFLISLGIGTHVNLA 168
GV + GIG +N+A
Sbjct: 182 GVKIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAW78172 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 81/196 (41%), Gaps = 38/196 (19%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFE--YIPENDLAKICRPVNRPIDLLFLLDGSGSVG-GN 54
+ FL+F F ++ +Q ++ E Y E +C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEIKYREE-----VC---NDEVDLYLLMDCSGSIRRHN 63
Query: 55 TFQTQMEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIR-HKSGTTKTGKAL------ 107
+ + KLI L + N L V A + IR H + KAL
Sbjct: 64 WVNHAVPLAMKLIQQLNLN--DNAIHLYVNVFSNNAREIIRLHSDASKNKEKALIIIKSL 121
Query: 108 -------------EKAIQLYKDKSSGARFGNVAKVVVVVSDG--RSLDDPVPTAIRLRQT 152
+ +Q+ K + N ++VV+++DG S+ D + + +L
Sbjct: 122 LSTNLPYGRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPDSIQDSLKESRKLNDR 181
Query: 153 GVFLISLGIGTHVNLA 168
GV + GIG +N+A
Sbjct: 182 GVKIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAA29778 TRAP (Invasion) [Plasmodium falciparum]
Length = 562
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 81/196 (41%), Gaps = 38/196 (19%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFE--YIPENDLAKICRPVNRPIDLLFLLDGSGSVG-GN 54
+ FL+F F ++ +Q ++ E Y E +C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEIKYREE-----VC---NDEVDLYLLMDCSGSIRRHN 63
Query: 55 TFQTQMEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIR-HKSGTTKTGKAL------ 107
+ + KLI L + N L V A + IR H + KAL
Sbjct: 64 WVNHAVPLAMKLIQQLNLN--DNAIHLYVNVFSNNAKEIIRLHSDASKNKEKALIIIRSL 121
Query: 108 -------------EKAIQLYKDKSSGARFGNVAKVVVVVSDG--RSLDDPVPTAIRLRQT 152
+ +Q+ K + N ++VV+++DG S+ D + + +L
Sbjct: 122 LSTNLPYGRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPDSIQDSLKESRKLNDL 181
Query: 153 GVFLISLGIGTHVNLA 168
GV + GIG +N+A
Sbjct: 182 GVKIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAA29772 TRAP (Invasion) [Plasmodium falciparum]
Length = 565
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 81/196 (41%), Gaps = 38/196 (19%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFE--YIPENDLAKICRPVNRPIDLLFLLDGSGSVG-GN 54
+ FL+F F ++ +Q ++ E Y E +C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEIKYREE-----VC---NDEVDLYLLMDCSGSIRRHN 63
Query: 55 TFQTQMEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIR-HKSGTTKTGKAL------ 107
+ + KLI L + N L V A + IR H + KAL
Sbjct: 64 WVNHAVPLAMKLIQQLNLN--DNAIHLYVNVFSNNAKEIIRLHSDASKNKEKALIIIRSL 121
Query: 108 -------------EKAIQLYKDKSSGARFGNVAKVVVVVSDG--RSLDDPVPTAIRLRQT 152
+ +Q+ K + N ++VV+++DG S+ D + + +L
Sbjct: 122 LSTNLPYGRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPDSIQDSLKESRKLSDR 181
Query: 153 GVFLISLGIGTHVNLA 168
GV + GIG +N+A
Sbjct: 182 GVKIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAW78173 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 83/199 (41%), Gaps = 44/199 (22%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFE--YIPENDLAKICRPVNRPIDLLFLLDGSGSVG-GN 54
+ FL+F F ++ +Q ++ E Y E +C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEIKYREE-----VC---NDEVDLYLLMDCSGSIRRHN 63
Query: 55 TFQTQMEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIRHKSGTTKTGKALEKAIQLY 114
+ + KLI L + N L V A + IR S +K EKA+ +
Sbjct: 64 WVNHAVPLAMKLIQQLNLN--DNAIHLYVNVFSNNAREIIRLHSDASKNK---EKALSII 118
Query: 115 KDK-SSGARFG----------------------NVAKVVVVVSDG--RSLDDPVPTAIRL 149
K S+ FG N ++VV+++DG S+ D + + +L
Sbjct: 119 KSLLSTNLPFGRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPDSIQDSLKESRKL 178
Query: 150 RQTGVFLISLGIGTHVNLA 168
GV + GIG +N+A
Sbjct: 179 SDRGVKIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAW78148 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 81/196 (41%), Gaps = 38/196 (19%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFE--YIPENDLAKICRPVNRPIDLLFLLDGSGSVG-GN 54
+ FL+F F ++ +Q ++ E Y E +C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEIKYREE-----VC---NDQVDLYLLMDCSGSIRRHN 63
Query: 55 TFQTQMEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIR-HKSGTTKTGKAL------ 107
+ + KLI L + N L V A + IR H + KAL
Sbjct: 64 WVNHAVPLAMKLIQQLNLN--DNAIHLYVNVFSNNAREIIRLHSDASKNKEKALIIIKSL 121
Query: 108 -------------EKAIQLYKDKSSGARFGNVAKVVVVVSDG--RSLDDPVPTAIRLRQT 152
+ +Q+ K + N ++VV+++DG S+ D + + +L
Sbjct: 122 LSTNLPYGRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPDSIQDSLKESRKLNDL 181
Query: 153 GVFLISLGIGTHVNLA 168
GV + GIG +N+A
Sbjct: 182 GVKIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAW78131 TRAP (Invasion) [Plasmodium falciparum]
Length = 557
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 82/196 (41%), Gaps = 38/196 (19%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFE--YIPENDLAKICRPVNRPIDLLFLLDGSGSVG-GN 54
+ FL+F F ++ +Q ++ E Y E +C N +D+ L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEIKYREE-----VC---NDEVDVYLLMDCSGSIRRHN 63
Query: 55 TFQTQMEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIR-HKSGTTKTGKAL------ 107
+ + KLI L + N L V A + IR H + KAL
Sbjct: 64 WVNHAVPLAMKLIQQLNLN--DNAIHLYVNVFSNNAKEIIRLHSDASKNKEKALIIIKSL 121
Query: 108 -------------EKAIQLYKDKSSGARFGNVAKVVVVVSDG--RSLDDPVPTAIRLRQT 152
+ +Q+ K + N ++VV+++DG S+ D + + +L+
Sbjct: 122 LSTNLPFGRTNLSDALLQVRKHLNDRINRENANQLVVILTDGIPDSIQDSLKESRKLKDR 181
Query: 153 GVFLISLGIGTHVNLA 168
GV + GIG +N+A
Sbjct: 182 GVKIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAW78137 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 81/196 (41%), Gaps = 38/196 (19%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFE--YIPENDLAKICRPVNRPIDLLFLLDGSGSVG-GN 54
+ FL+F F ++ +Q ++ E Y E +C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEIKYREE-----VC---NDEVDLYLLMDCSGSIRRHN 63
Query: 55 TFQTQMEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIR-HKSGTTKTGKAL------ 107
+ + KLI L + N L V A + IR H + KAL
Sbjct: 64 WVNHAVPLAMKLIQQLNLN--DNAIHLYVNVFSNNAREIIRLHSDASKNKEKALIIIKSL 121
Query: 108 -------------EKAIQLYKDKSSGARFGNVAKVVVVVSDG--RSLDDPVPTAIRLRQT 152
+ +Q+ K + N ++VV+++DG S+ D + + +L
Sbjct: 122 LSTNLPYGRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPDSIQDSLKESRKLNDR 181
Query: 153 GVFLISLGIGTHVNLA 168
GV + GIG +N+A
Sbjct: 182 GVKIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAW78163 TRAP (Invasion) [Plasmodium falciparum]
Length = 565
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 83/199 (41%), Gaps = 44/199 (22%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFE--YIPENDLAKICRPVNRPIDLLFLLDGSGSVG-GN 54
+ FL+F F ++ +Q ++ E Y E +C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEIKYREE-----VC---NDEVDLYLLMDCSGSIRRHN 63
Query: 55 TFQTQMEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIRHKSGTTKTGKALEKAIQLY 114
+ + KLI L + N L V A + IR S +K EKA+ +
Sbjct: 64 WVNHAVPLAMKLIQQLNLN--DNAIHLYVNVFSNNAREIIRLHSDASKNK---EKALSII 118
Query: 115 KDK-SSGARFG----------------------NVAKVVVVVSDG--RSLDDPVPTAIRL 149
K S+ FG N ++VV+++DG S+ D + + +L
Sbjct: 119 KSLLSTNLPFGRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPNSIQDSLKESRKL 178
Query: 150 RQTGVFLISLGIGTHVNLA 168
GV + GIG +N+A
Sbjct: 179 SDRGVKIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAA29774 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 80/195 (41%), Gaps = 36/195 (18%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFE--YIPENDLAKICRPVNRPIDLLFLLDGSGSVG-GN 54
+ FL+F F ++ +Q ++ E Y E +C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEIKYREE-----VC---NDEVDLYLLMDCSGSIRRHN 63
Query: 55 TFQTQMEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIRHKSGTTKTGKAL------- 107
+ + KLI L + L + + + R+ H + KAL
Sbjct: 64 WVNHAVPLAMKLIQQLNLNENAIHLYLNIFSNNAREIIRL-HSDASKNKEKALIIIKSLL 122
Query: 108 ------------EKAIQLYKDKSSGARFGNVAKVVVVVSDG--RSLDDPVPTAIRLRQTG 153
+ +Q+ K + N ++VV+++DG S+ D + + +L G
Sbjct: 123 STNLPYGRTNLSDALLQVRKHLNDRINRENANQLVVILTDGIPDSIQDSLKESRKLNDRG 182
Query: 154 VFLISLGIGTHVNLA 168
V + GIG +N+A
Sbjct: 183 VKIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAW78177 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 80/195 (41%), Gaps = 36/195 (18%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFE--YIPENDLAKICRPVNRPIDLLFLLDGSGSVG-GN 54
+ FL+F F ++ +Q ++ E Y E +C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEIKYREE-----VC---NDEVDLYLLMDCSGSIRRHN 63
Query: 55 TFQTQMEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIRHKSGTTKTGKAL------- 107
+ + KLI L + +V + + R+ H + KAL
Sbjct: 64 WVNHAVPLAMKLIQQLNLNDNAIHLYASVFSNNAREIIRL-HSDASKNKEKALIIIKSLL 122
Query: 108 ------------EKAIQLYKDKSSGARFGNVAKVVVVVSDG--RSLDDPVPTAIRLRQTG 153
+ +Q+ K + N ++VV+++DG S+ D + + +L G
Sbjct: 123 NTNLPFGRTNLSDALLQVRKHLNDRINRENANQLVVILTDGIPNSIQDSLKESRKLNDLG 182
Query: 154 VFLISLGIGTHVNLA 168
V + GIG +N+A
Sbjct: 183 VKIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAA29777 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 82/196 (41%), Gaps = 38/196 (19%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFE--YIPENDLAKICRPVNRPIDLLFLLDGSGSVG-GN 54
+ FL+F F ++ +Q ++ E Y E +C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEIKYREE-----VC---NDEVDLYLLMDCSGSIRRHN 63
Query: 55 TFQTQMEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIR-HKSGTTKTGKAL------ 107
+ + + KLI L + +N L A + IR H + KAL
Sbjct: 64 WVKHAVPLAMKLIQQLNLN--ENAIHLYANIFSNNAKEIIRLHSDASKNKEKALIIIKSL 121
Query: 108 -------------EKAIQLYKDKSSGARFGNVAKVVVVVSDG--RSLDDPVPTAIRLRQT 152
+ +Q+ K + N ++VV+++DG S+ D + + +L
Sbjct: 122 LSTNLPYGRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPDSIQDSLKESRKLNDR 181
Query: 153 GVFLISLGIGTHVNLA 168
GV + GIG +N+A
Sbjct: 182 GVKIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAW78174 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 81/196 (41%), Gaps = 38/196 (19%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFE--YIPENDLAKICRPVNRPIDLLFLLDGSGSVG-GN 54
+ FL+F F ++ +Q ++ E Y E +C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEIKYREE-----VC---NDEVDLYLLMDCSGSIRRHN 63
Query: 55 TFQTQMEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIR-HKSGTTKTGKAL------ 107
+ + KLI L + N L V A + IR H + KAL
Sbjct: 64 WVNHAVPLAMKLIQQLNLN--DNAIHLYVNVFSNNAKEIIRLHSDASKNKEKALIIIRSL 121
Query: 108 -------------EKAIQLYKDKSSGARFGNVAKVVVVVSDG--RSLDDPVPTAIRLRQT 152
+ +Q+ K + N ++VV+++DG S+ D + + +L
Sbjct: 122 LSTNLPYGRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPDSIQDSLKESRKLSDR 181
Query: 153 GVFLISLGIGTHVNLA 168
GV + GIG +N+A
Sbjct: 182 GVKIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAA29776 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 80/195 (41%), Gaps = 36/195 (18%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFE--YIPENDLAKICRPVNRPIDLLFLLDGSGSVG-GN 54
+ FL+F F ++ +Q ++ E Y E +C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEIKYREE-----VC---NDEVDLYLLMDCSGSIRRHN 63
Query: 55 TFQTQMEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIRHKSGTTKTGKAL------- 107
+ + KLI L + L + + + R+ H + KAL
Sbjct: 64 WVNHAVPLAMKLIQQLNLNENAIHLYLNIFSNNAREIIRL-HSDASKNKEKALIIIKSLL 122
Query: 108 ------------EKAIQLYKDKSSGARFGNVAKVVVVVSDG--RSLDDPVPTAIRLRQTG 153
+ +Q+ K + N ++VV+++DG S+ D + + +L G
Sbjct: 123 STNLPYGRTNLSDALLQVRKHLNDRINRENANQLVVILTDGIPDSIQDSLKESRKLNDRG 182
Query: 154 VFLISLGIGTHVNLA 168
V + GIG +N+A
Sbjct: 183 VKIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAQ11895 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 80/195 (41%), Gaps = 36/195 (18%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFE--YIPENDLAKICRPVNRPIDLLFLLDGSGSVG-GN 54
+ FL+F F ++ +Q ++ E Y E +C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEIKYREE-----VC---NDEVDLYLLMDCSGSIRRHN 63
Query: 55 TFQTQMEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIRHKSGTTKTGKAL------- 107
+ + KLI L + L + + + R+ H + KAL
Sbjct: 64 WVNHAVPLAMKLIQQLNLNENAIHLYLNIFSNNAREIIRL-HSDASKNKEKALIIIKSLL 122
Query: 108 ------------EKAIQLYKDKSSGARFGNVAKVVVVVSDG--RSLDDPVPTAIRLRQTG 153
+ +Q+ K + N ++VV+++DG S+ D + + +L G
Sbjct: 123 STNLPYGRTNLSDALLQVRKHLNDRINRENANQLVVILTDGIPDSIQDSLKESRKLNDRG 182
Query: 154 VFLISLGIGTHVNLA 168
V + GIG +N+A
Sbjct: 183 VKIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAW78149 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 81/196 (41%), Gaps = 38/196 (19%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFE--YIPENDLAKICRPVNRPIDLLFLLDGSGSVG-GN 54
+ FL+F F ++ +Q ++ E Y E +C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEIKYREE-----VC---NDQVDLYLLMDCSGSIRRHN 63
Query: 55 TFQTQMEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIR-HKSGTTKTGKAL------ 107
+ + KLI L + N L V A + IR H + KAL
Sbjct: 64 WVNHAVPLAMKLIQQLNLN--DNAIHLYVNVFSNNAREIIRLHSDASKNKEKALSIIKSL 121
Query: 108 -------------EKAIQLYKDKSSGARFGNVAKVVVVVSDG--RSLDDPVPTAIRLRQT 152
+ +Q+ K + N ++VV+++DG S+ D + + +L
Sbjct: 122 LSTNLPYGRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPDSIQDSLKESRKLNDR 181
Query: 153 GVFLISLGIGTHVNLA 168
GV + GIG +N+A
Sbjct: 182 GVKIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAW78151 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 81/196 (41%), Gaps = 38/196 (19%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFE--YIPENDLAKICRPVNRPIDLLFLLDGSGSVG-GN 54
+ FL+F F ++ +Q ++ E Y E +C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEIKYREE-----VC---NDEVDLYLLMDCSGSIRRHN 63
Query: 55 TFQTQMEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIR-HKSGTTKTGKAL------ 107
+ + KLI L + N L V A + IR H + KAL
Sbjct: 64 WVNHAVPLAMKLIQQLNLN--DNAIHLYVNVFSNNAKEIIRLHSDASKNKEKALIIIRSL 121
Query: 108 -------------EKAIQLYKDKSSGARFGNVAKVVVVVSDG--RSLDDPVPTAIRLRQT 152
+ +Q+ K + N ++VV+++DG S+ D + + +L
Sbjct: 122 LSTNLPYGRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPDSIQDSLKESRKLSDR 181
Query: 153 GVFLISLGIGTHVNLA 168
GV + GIG +N+A
Sbjct: 182 GVKIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAW78133 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 81/196 (41%), Gaps = 38/196 (19%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFE--YIPENDLAKICRPVNRPIDLLFLLDGSGSVG-GN 54
+ FL+F F ++ +Q ++ E Y E +C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEIKYREE-----VC---NDEVDLYLLMDCSGSIRRHN 63
Query: 55 TFQTQMEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIR-HKSGTTKTGKAL------ 107
+ + KLI L + N L V A + IR H + KAL
Sbjct: 64 WVNHAVPLAMKLIQQLNLN--DNAIHLYVNVFSNNAKEIIRLHSDASKNKEKALIIIRSL 121
Query: 108 -------------EKAIQLYKDKSSGARFGNVAKVVVVVSDG--RSLDDPVPTAIRLRQT 152
+ +Q+ K + N ++VV+++DG S+ D + + +L
Sbjct: 122 LSTNLPYGRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPDSIQDSLKESRKLSDR 181
Query: 153 GVFLISLGIGTHVNLA 168
GV + GIG +N+A
Sbjct: 182 GVKIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAW78164 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 81/196 (41%), Gaps = 38/196 (19%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFE--YIPENDLAKICRPVNRPIDLLFLLDGSGSVG-GN 54
+ FL+F F ++ +Q ++ E Y E +C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEIKYREE-----VC---NDEVDLYLLMDCSGSIRRHN 63
Query: 55 TFQTQMEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIR-HKSGTTKTGKAL------ 107
+ + KLI L + +N L A + IR H + KAL
Sbjct: 64 WVNHAVPLAMKLIQQLNLN--ENAIHLYANVFSNNAREIIRLHSDASKNKEKALIIIKSL 121
Query: 108 -------------EKAIQLYKDKSSGARFGNVAKVVVVVSDG--RSLDDPVPTAIRLRQT 152
+ +Q+ K + N ++VV+++DG S+ D + + +L
Sbjct: 122 LSTNLPFGRTNLSDALLQVRKHLNDRINRENANQLVVILTDGIPNSIQDSLKESRKLNDL 181
Query: 153 GVFLISLGIGTHVNLA 168
GV + GIG +N+A
Sbjct: 182 GVKIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAW78144 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 81/196 (41%), Gaps = 38/196 (19%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFE--YIPENDLAKICRPVNRPIDLLFLLDGSGSVG-GN 54
+ FL+F F ++ +Q ++ E Y E +C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEIKYREE-----VC---NDQVDLYLLMDCSGSIRRHN 63
Query: 55 TFQTQMEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIR-HKSGTTKTGKAL------ 107
+ + KLI L + N L V A + IR H + KAL
Sbjct: 64 WVNHAVPLAMKLIQQLNLN--DNAIHLYVNVFSNNAREIIRLHSDASKNKEKALSIIKSL 121
Query: 108 -------------EKAIQLYKDKSSGARFGNVAKVVVVVSDG--RSLDDPVPTAIRLRQT 152
+ +Q+ K + N ++VV+++DG S+ D + + +L
Sbjct: 122 LSTNLPYGRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPDSIQDSLKESRKLSDR 181
Query: 153 GVFLISLGIGTHVNLA 168
GV + GIG +N+A
Sbjct: 182 GVKIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAA29770 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 82/196 (41%), Gaps = 38/196 (19%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFE--YIPENDLAKICRPVNRPIDLLFLLDGSGSVG-GN 54
+ FL+F F ++ +Q ++ E Y E +C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEIKYREE-----VC---NDEVDLYLLMDCSGSIRRHN 63
Query: 55 TFQTQMEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIR-HKSGTTKTGKAL------ 107
+ + + KLI L + +N L A + IR H + KAL
Sbjct: 64 WVKHAVPLAMKLIQQLNLN--ENAIHLYANIFSNNAKEIIRLHSDASKNKEKALIIIKSL 121
Query: 108 -------------EKAIQLYKDKSSGARFGNVAKVVVVVSDG--RSLDDPVPTAIRLRQT 152
+ +Q+ K + N ++VV+++DG S+ D + + +L
Sbjct: 122 LSTNLPYGRTNLSDALLQVRKHLNDRINRENANQLVVILTDGIPDSIQDSLKESRKLNDR 181
Query: 153 GVFLISLGIGTHVNLA 168
GV + GIG +N+A
Sbjct: 182 GVKIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAQ11892 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 35.4 bits (80), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 81/196 (41%), Gaps = 38/196 (19%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFE--YIPENDLAKICRPVNRPIDLLFLLDGSGSVG-GN 54
+ FL+F F ++ +Q ++ E Y E +C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEIKYHEE-----VC---NDQVDLYLLMDCSGSIRRHN 63
Query: 55 TFQTQMEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIR-HKSGTTKTGKAL------ 107
+ + KLI L + +N L A + IR H + KAL
Sbjct: 64 WVNHAVPLAMKLIQQLNLN--ENAIHLYANVFSNNAREIIRLHSDASKNKEKALIIIKSL 121
Query: 108 -------------EKAIQLYKDKSSGARFGNVAKVVVVVSDG--RSLDDPVPTAIRLRQT 152
+ +Q+ K + N ++VV+++DG S+ D + + +L
Sbjct: 122 LSTNLPYGRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPDSIQDSLKESRKLNDR 181
Query: 153 GVFLISLGIGTHVNLA 168
GV + GIG +N+A
Sbjct: 182 GVKIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAA29775 TRAP (Invasion) [Plasmodium falciparum]
Length = 574
Score = 35.4 bits (80), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 80/195 (41%), Gaps = 36/195 (18%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFE--YIPENDLAKICRPVNRPIDLLFLLDGSGSVG-GN 54
+ FL+F F ++ +Q ++ E Y E +C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEIKYREE-----VC---NDEVDLYLLMDCSGSIRRHN 63
Query: 55 TFQTQMEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIRHKSGTTKTGKAL------- 107
+ + KLI L + +V + + R+ H + KAL
Sbjct: 64 WVNHAVPLAMKLIQQLNLNDNAIHLYASVFSNNAREIIRL-HSDASKNKEKALIIIKSLL 122
Query: 108 ------------EKAIQLYKDKSSGARFGNVAKVVVVVSDG--RSLDDPVPTAIRLRQTG 153
+ +Q+ K + N ++VV+++DG S+ D + + +L G
Sbjct: 123 STNLPYGKTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPDSIQDSLKESRKLSDRG 182
Query: 154 VFLISLGIGTHVNLA 168
V + GIG +N+A
Sbjct: 183 VKIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAW78168 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 82/199 (41%), Gaps = 44/199 (22%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFE--YIPENDLAKICRPVNRPIDLLFLLDGSGSVG-GN 54
+ FL+F F ++ +Q ++ E Y E +C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEIKYREE-----VC---NDEVDLYLLMDCSGSIRRHN 63
Query: 55 TFQTQMEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIRHKSGTTKTGKALEKAIQLY 114
+ + KLI L + N L V A + IR S +K EKA+ +
Sbjct: 64 WVNHAVPLAMKLIQQLNLN--DNAIHLYVNVFSNNAREIIRLHSDASKNK---EKALSII 118
Query: 115 KDK-SSGARFG----------------------NVAKVVVVVSDG--RSLDDPVPTAIRL 149
K S+ FG N ++VV+++DG S+ D + + L
Sbjct: 119 KSLLSTNLPFGRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPDSIQDSLKESRNL 178
Query: 150 RQTGVFLISLGIGTHVNLA 168
GV + GIG +N+A
Sbjct: 179 NDRGVKIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAW78160 TRAP (Invasion) [Plasmodium falciparum]
Length = 557
Score = 35.0 bits (79), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 80/196 (40%), Gaps = 38/196 (19%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFE--YIPENDLAKICRPVNRPIDLLFLLDGSGSVG-GN 54
+ FL+F F ++ +Q ++ E Y E +C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEIKYREE-----VC---NDEVDLYLLMDCSGSIRRHN 63
Query: 55 TFQTQMEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIR-HKSGTTKTGKAL------ 107
+ + KLI L + N L A + IR H + KAL
Sbjct: 64 WVNHAVPLAMKLIQQLNLN--DNAIHLYANVFSNNAREIIRLHSDASKNKEKALIIIKSL 121
Query: 108 -------------EKAIQLYKDKSSGARFGNVAKVVVVVSDG--RSLDDPVPTAIRLRQT 152
+ +Q+ K + N ++VV+++DG S+ D + + +L
Sbjct: 122 LNTNLPFGRTNLSDALLQVRKHLNDRINRENANQLVVILTDGIPDSIQDSLKESRKLNDL 181
Query: 153 GVFLISLGIGTHVNLA 168
GV + GIG +N+A
Sbjct: 182 GVKIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAW78159 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 35.0 bits (79), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 80/196 (40%), Gaps = 38/196 (19%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFE--YIPENDLAKICRPVNRPIDLLFLLDGSGSVG-GN 54
+ FL+F F ++ +Q ++ E Y E +C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEIKYREE-----VC---NDEVDLYLLMDCSGSIRRHN 63
Query: 55 TFQTQMEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIR-HKSGTTKTGKAL------ 107
+ + KLI L + N L A + IR H + KAL
Sbjct: 64 WVNHAVPLAMKLIQQLNLN--DNAIHLYANVFSNNAREIIRLHSDASKNKEKALIIIKSL 121
Query: 108 -------------EKAIQLYKDKSSGARFGNVAKVVVVVSDG--RSLDDPVPTAIRLRQT 152
+ +Q+ K + N ++VV+++DG S+ D + + +L
Sbjct: 122 LNTNLPFGRTNLSDALLQVRKHLNDRINRENANQLVVILTDGIPNSIQDSLKESRKLNDL 181
Query: 153 GVFLISLGIGTHVNLA 168
GV + GIG +N+A
Sbjct: 182 GVKIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAW78176 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 82/199 (41%), Gaps = 44/199 (22%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFE--YIPENDLAKICRPVNRPIDLLFLLDGSGSVG-GN 54
+ FL+F F ++ +Q ++ E Y E +C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEIKYREE-----VC---NDEVDLYLLMDCSGSIRRHN 63
Query: 55 TFQTQMEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIRHKSGTTKTGKALEKAIQLY 114
+ + KLI L + N L A + IR S +K EKA+ +
Sbjct: 64 WVNHAVPLAMKLIQQLNLN--DNAIHLYANVFSNNAREIIRLHSDASKNK---EKALSII 118
Query: 115 KDK-SSGARFG----------------------NVAKVVVVVSDG--RSLDDPVPTAIRL 149
K S+ FG N ++VV+++DG S+ D + + +L
Sbjct: 119 KSLLSTNLPFGRTNLSDALLQVRKHLNDRINRENANQLVVILTDGIPNSIQDSLKESRKL 178
Query: 150 RQTGVFLISLGIGTHVNLA 168
GV + GIG +N+A
Sbjct: 179 NDLGVKIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAW78157 TRAP (Invasion) [Plasmodium falciparum]
Length = 557
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 80/196 (40%), Gaps = 38/196 (19%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFE--YIPENDLAKICRPVNRPIDLLFLLDGSGSVG-GN 54
+ FL+F F ++ +Q ++ E Y E +C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEIKYREE-----VC---NDQVDLYLLMDCSGSIRRHN 63
Query: 55 TFQTQMEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIR-HKSGTTKTGKAL------ 107
+ + KLI L + N L V A + IR H + KAL
Sbjct: 64 WVNHAVPLAMKLIQQLNLN--DNAIHLYVNVFSNNAKEIIRLHSDASKNKEKALIIIKSL 121
Query: 108 -------------EKAIQLYKDKSSGARFGNVAKVVVVVSDG--RSLDDPVPTAIRLRQT 152
+ +Q+ K + N ++VV+++DG S+ D + + L
Sbjct: 122 LSTNLPFGRTNLSDALLQVRKHLNDRINRENANQLVVILTDGIPDSIQDSLKESRNLNDR 181
Query: 153 GVFLISLGIGTHVNLA 168
GV + GIG +N+A
Sbjct: 182 GVKIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAW78132 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 80/196 (40%), Gaps = 38/196 (19%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFE--YIPENDLAKICRPVNRPIDLLFLLDGSGSVG-GN 54
+ FL+F F ++ +Q ++ E Y E +C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEIKYREE-----VC---NDEVDLYLLMDCSGSIRRHN 63
Query: 55 TFQTQMEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIR-HKSGTTKTGKAL------ 107
+ + KLI L + N L A + IR H + KAL
Sbjct: 64 WVNHAVPLAMKLIQQLNLN--DNAIHLYANVFSNNAREIIRLHSDASKNKEKALIIIKSL 121
Query: 108 -------------EKAIQLYKDKSSGARFGNVAKVVVVVSDG--RSLDDPVPTAIRLRQT 152
+ +Q+ K + N ++VV+++DG S+ D + + +L
Sbjct: 122 LNTNLPFGRTNLSDALLQVRKHLNDRINRENANQLVVILTDGIPDSIQDSLKESRKLNDL 181
Query: 153 GVFLISLGIGTHVNLA 168
GV + GIG +N+A
Sbjct: 182 GVKIAVFGIGQGINVA 197
>M.Javanica_Scaff7686g049067 on AAW78165 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 80/196 (40%), Gaps = 38/196 (19%)
Query: 1 MYFLLFIFQFYIS---IQKSLTFE--YIPENDLAKICRPVNRPIDLLFLLDGSGSVG-GN 54
+ FL+F F ++ +Q ++ E Y E +C N +DL L+D SGS+ N
Sbjct: 12 IVFLIFFDLFLVNGRDVQNNIVDEIKYREE-----VC---NDEVDLYLLMDCSGSIRRHN 63
Query: 55 TFQTQMEILDKLIDILEIGPGQNQSQLAVMHQLRQALQRIR-HKSGTTKTGKAL------ 107
+ + KLI L + N L A + IR H + KAL
Sbjct: 64 WVNHAVPLAMKLIQQLNLN--DNAIHLYANVFSNNAREIIRLHSDASKNKEKALIIIKSL 121
Query: 108 -------------EKAIQLYKDKSSGARFGNVAKVVVVVSDG--RSLDDPVPTAIRLRQT 152
+ +Q+ K + N ++VV+++DG S+ D + + +L
Sbjct: 122 LNTNLPFGRTNLSDALLQVRKHLNDRINRENANQLVVILTDGIPDSIQDSLKESRKLNDL 181
Query: 153 GVFLISLGIGTHVNLA 168
GV + GIG +N+A
Sbjct: 182 GVKIAVFGIGQGINVA 197
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff286g004415
(358 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_803344 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.12
XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum] 25 8.1
XP_001351319 PfEMP1 (Establishment) [Plasmodium falciparum] 25 9.8
>M.Javanica_Scaff286g004415 on XP_803344 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 249
Score = 30.4 bits (67), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 27/129 (20%)
Query: 143 IRRCDHKKGNNT---TKSTTTTTPPS---NNNT------------TIKSTKQTNNQITTP 184
+ + DH+ GNNT T S P + NNN+ T S ++ +P
Sbjct: 77 VAQHDHQAGNNTSTPTGSEREAAPAASGDNNNSPTAAVAGAGEFETTHSEDFFTTEVESP 136
Query: 185 ITPKSTIVPSE---TTTTQS--TSGDSLVVPQVITTKDTCLSLSNASGIIDSELNSPIED 239
+ + P E +TT QS T+GD P +++ SL+ + G++ + +P+ +
Sbjct: 137 MGEEEQSAPEEGANSTTLQSRETTGDGDAQP----VQESMASLAGSEGLLPKQSEAPVPE 192
Query: 240 GIFTFYGAG 248
+ G+G
Sbjct: 193 NSHSESGSG 201
>M.Javanica_Scaff286g004415 on XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2264
Score = 25.0 bits (53), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Query: 151 GNNTTKSTTTTTPPSNNNTTIKSTKQTNNQITTPITPKSTIVPSETTT 198
GNNTT S TT S NNTT T+ N I P S I +E T
Sbjct: 1903 GNNTTASGNNTT-ASGNNTTASDTQ---NDIQNDGIPSSKITDNEWNT 1946
>M.Javanica_Scaff286g004415 on XP_001351319 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2646
Score = 25.0 bits (53), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 151 GNNTTKSTTTTTPPSNNNTTI-KST-KQTNNQITTPITPKSTIVPSETTT 198
GNNTT S TT NN T K+T T N I + P S I +E T
Sbjct: 2298 GNNTTASGNNTTASGNNTTASGKNTPSDTQNDIQSDGIPSSKITDNEWNT 2347
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff25685g091275
(184 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAR88085 TbcatB (Cysteine proteases) [Trypanosoma brucei] 23 9.9
>M.Javanica_Scaff25685g091275 on AAR88085 TbcatB (Cysteine proteases) [Trypanosoma brucei]
Length = 340
Score = 23.5 bits (49), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 160 EQQLRPIPERFNAAQRWGDC 179
E+ P+P F++A+ W +C
Sbjct: 88 EEARAPLPSSFDSAEAWPNC 107
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff26056g091826
(326 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4999g037315
(182 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_821669 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.0
XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum] 25 4.9
XP_829779 VSG (Establishment) [Trypanosoma brucei] 24 5.5
XP_820143 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 6.3
>M.Javanica_Scaff4999g037315 on XP_821669 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 879
Score = 25.0 bits (53), Expect = 3.0, Method: Composition-based stats.
Identities = 10/20 (50%), Positives = 17/20 (85%)
Query: 124 KYDEIVKNSKNVGEMLEEGV 143
K +E++KN+K+ ++LEEGV
Sbjct: 132 KPEEVLKNAKDKTQVLEEGV 151
>M.Javanica_Scaff4999g037315 on XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2858
Score = 24.6 bits (52), Expect = 4.9, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 8/67 (11%)
Query: 68 EEYKYLKEHEEYKTLFETFNKAFGRLVNKVVEFAQLNLKNINISLDETEEIANELKKYDE 127
EEYK K E +K FET NKA+ + N N NI + T+ N +KK E
Sbjct: 1965 EEYK--KFIEIWKKQFETQNKAYQEIYRNA---TTTNRDNNNIVDENTK---NFVKKLQE 2016
Query: 128 IVKNSKN 134
+ +N
Sbjct: 2017 NCRTDRN 2023
>M.Javanica_Scaff4999g037315 on XP_829779 VSG (Establishment) [Trypanosoma brucei]
Length = 486
Score = 24.3 bits (51), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 63 DSIEFEEYKYLKEHEEYKTLFETFNKAFGRLVN 95
D +E EE Y K++ KT+ + NKA G+L
Sbjct: 368 DPLENEEITYDKDNNPVKTMIKDANKA-GKLAT 399
>M.Javanica_Scaff4999g037315 on XP_820143 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 869
Score = 24.3 bits (51), Expect = 6.3, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 10/61 (16%)
Query: 127 EIVKNSKNVGEMLEEGV---------MIRTVKLVLGQDGVEMLGGLCAMLRVPRGDAGGY 177
E+++ K+ ++LEEG + R ++ G D + ML G C P AGG
Sbjct: 135 EVLEKPKDWTKVLEEGASDDAKTKVDVSRPTTVLKGSD-IYMLVGQCGSKESPNSGAGGC 193
Query: 178 E 178
E
Sbjct: 194 E 194
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4503g034936
(70 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAX07967 alpha-10 giardin (Others) [Giardia duodenalis] 23 1.8
XP_818859 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.5
>M.Javanica_Scaff4503g034936 on AAX07967 alpha-10 giardin (Others) [Giardia duodenalis]
Length = 255
Score = 23.1 bits (48), Expect = 1.8, Method: Composition-based stats.
Identities = 6/18 (33%), Positives = 13/18 (72%)
Query: 38 FCRLDPFRSLLYLTYTPW 55
+C+ PF+SL+ + + P+
Sbjct: 89 YCKKGPFQSLMSMAWEPY 106
>M.Javanica_Scaff4503g034936 on XP_818859 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 867
Score = 21.9 bits (45), Expect = 4.5, Method: Composition-based stats.
Identities = 8/20 (40%), Positives = 11/20 (55%), Gaps = 1/20 (5%)
Query: 44 FRSLLYLTYTPWSVCC-CGG 62
F S + L + W +CC CG
Sbjct: 44 FTSTVLLLFLVWMICCDCGA 63
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6290g043271
(510 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_816371 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.30
XP_001351318 PfEMP1 (Establishment) [Plasmodium falciparum] 28 2.0
XP_001348153 MAEBL (Adhesin) [Plasmodium falciparum] 27 3.2
XP_820307 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 6.4
XP_820662 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 8.7
>M.Javanica_Scaff6290g043271 on XP_816371 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 757
Score = 30.4 bits (67), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Query: 335 FEEFSNRPIGNKGLETSGGKLSFPLKLAEDDYDNFEDDSLGDDSFDNDSL 384
FE F P G G+ GG L FP+ +DD D++ DS N L
Sbjct: 268 FERFF--PSGGSGVLMEGGTLVFPVIAFDDDNDDYSMIVYSTDSGANWML 315
>M.Javanica_Scaff6290g043271 on XP_001351318 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2169
Score = 27.7 bits (60), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 6/46 (13%)
Query: 96 KLVKAVTCQVCKKINQDKNPKPKDQKLSKNQKRELKKEKKEKTKKL 141
KLVK C C D P KNQK+E +K+K + TK++
Sbjct: 365 KLVKGYDCHKCSVACDDFEP------WIKNQKQEFEKQKGKYTKEM 404
>M.Javanica_Scaff6290g043271 on XP_001348153 MAEBL (Adhesin) [Plasmodium falciparum]
Length = 2054
Score = 26.9 bits (58), Expect = 3.2, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 359 LKLAEDDYDNFEDDSLGDDSFDNDSLGDVDEDGDLPNSSLGKAESDENGKGASEEDKSDE 418
+K +D+++N ++ + + + N + D + + ++ E+D K SE KS
Sbjct: 1778 IKDTKDNFENIQEGNNKNTPYINKEMFDSEIKEVVITKNMQLNEADAFEKHNSENSKSSN 1837
Query: 419 LDVDDFKEDEL----NSNLLKTDKDKKL 442
+ D KE +L N+L+TD+++K+
Sbjct: 1838 KNADFSKEKDLLEDDIENILETDENEKI 1865
>M.Javanica_Scaff6290g043271 on XP_820307 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 964
Score = 26.2 bits (56), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 282 VSSPLAR--KNVENKLPNSSNPSVPGALPSNMFGGKRKTEMDS 322
+S P AR K VE P +S + P A + GG+++TE DS
Sbjct: 747 LSIPKARGAKTVEGTPPVASKQATPEAETPSSLGGQQQTEQDS 789
>M.Javanica_Scaff6290g043271 on XP_820662 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 956
Score = 25.4 bits (54), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 282 VSSPLAR--KNVENKLPNSSNPSVPGALPSNMFGGKRKTEMD 321
+S P AR K VE P +S + P A + GG+++TE D
Sbjct: 740 LSIPEAREAKTVEVTPPEASKQATPEAATPSGLGGQQRTEQD 781
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7129g046859
(104 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum] 28 0.097
XP_811309 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.71
XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum] 23 7.7
>M.Javanica_Scaff7129g046859 on XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2858
Score = 28.1 bits (61), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 14 IFLKIQCAGKRIHVDVKIRDDWKEKREFIYLKNVEIKDRFVVKVIGKSNNQHGSFNKNIE 73
IF+ ++C R D K + W E ++ + K E + + N++HG +NK
Sbjct: 355 IFMDLECP--RCADDCKSYETWVENKKKEFNKQKEKYKEEINESKPGVNSEHGKYNKAFY 412
Query: 74 GYLRSVDLNLDKNMFEI 90
LR++ DK FEI
Sbjct: 413 DKLRTIYRTNDK-FFEI 428
>M.Javanica_Scaff7129g046859 on XP_811309 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1033
Score = 25.4 bits (54), Expect = 0.71, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 28 DVKIRDDWKEKREFIYLKNVEIKDRFVVKVIGKSNNQHGSFNKNI 72
D + DDW+ R + + ++ D + V V GK + H ++KN+
Sbjct: 604 DAEYFDDWEPNRTYQVVLRMDDDDEWTVFVDGKQID-HKRYDKNL 647
>M.Javanica_Scaff7129g046859 on XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3346
Score = 22.7 bits (47), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 14 IFLKIQCAGKRIHVDVKIRDDWKEKREFIYLKNVEIKDRFVVKVIGKSNNQHGSFNKNIE 73
IF+ ++C R D K + W EK++ + K + ++ V NN++G +NK
Sbjct: 362 IFMDLECP--RCADDCKSYETWVEKKKKEFNKQKKKYEKEVDATQNNDNNENGIYNKKFY 419
Query: 74 GYLRS 78
L+S
Sbjct: 420 DELKS 424
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5545g039933
(74 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3730g030848
(111 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum] 23 6.8
>M.Javanica_Scaff3730g030848 on XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2264
Score = 22.7 bits (47), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 9/39 (23%), Positives = 22/39 (56%)
Query: 42 ESSEKSWRRMFQRRKFRTPRYTCKLLRAKKYKLGIIRRY 80
++SEKS++ + + RT + C+ + KK + + ++
Sbjct: 1456 KNSEKSFKDSYLFKSLRTEEWECRFNKEKKMDVCKLNKF 1494
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5559g040012
(55 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_812152 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.4
XP_821438 Trans-sialidase (Invasion) [Trypanosoma cruzi] 21 7.3
>M.Javanica_Scaff5559g040012 on XP_812152 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 923
Score = 21.6 bits (44), Expect = 4.4, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 10 ILIFISGMPSDATAVRQVAMKSVESKSEKGH 40
I I G+ D V + + SK+E+GH
Sbjct: 380 ITAMIKGVGDDKKEVMLITLPVYSSKNEEGH 410
>M.Javanica_Scaff5559g040012 on XP_821438 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 957
Score = 20.8 bits (42), Expect = 7.3, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 14 ISGMPSDATAVRQVAMKSVESKSEKGHAVTLKE 46
+SG + + KS ESK +K + L E
Sbjct: 422 VSGKEEEDVTASSLLYKSAESKDKKDELIALYE 454
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5673g040516
(134 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_820143 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.9
XP_805336 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 7.8
>M.Javanica_Scaff5673g040516 on XP_820143 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 869
Score = 23.9 bits (50), Expect = 3.9, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 6/38 (15%)
Query: 23 LTEQI--ISGMMTT----QGRVEMTCTSNTSKTSSCST 54
LTEQ+ + ++TT GRV CTS +S+ ST
Sbjct: 452 LTEQLKRVKDVLTTWKEVDGRVSQLCTSLSSEKERAST 489
>M.Javanica_Scaff5673g040516 on XP_805336 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 931
Score = 23.1 bits (48), Expect = 7.8, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 20/40 (50%)
Query: 15 IILPSFLSLTEQIISGMMTTQGRVEMTCTSNTSKTSSCST 54
++L L +++++ GRV CTS +++ ST
Sbjct: 460 VLLTEQLQRVKEVLTTWKEVDGRVSQLCTSLSAQKERTST 499
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5074g037707
(510 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001611206 variant erythrocyte surface antigen-1, alpha subun... 31 0.17
AAS67870 Leucyl aminopeptidase (Others) [Trypanosoma brucei] 27 4.6
XP_820184 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 5.3
XP_815842 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 5.7
>M.Javanica_Scaff5074g037707 on XP_001611206 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1285
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 153 MPLSIDPNE-SKQYRVEIYLKRFDGGTVLLLEPWEGRDEYSTINIENVLLTLGIANVEY- 210
M L DP E ++ RV+ DG + ++ EG +++VL+T+G V+
Sbjct: 609 MCLGCDPMEHDRKCRVDKVKGELDG-VMKKVKALEGEKTEGIKEVKDVLVTIGNVVVQLG 667
Query: 211 HQPENIENRKKDKELYGKVK-FLERSRELKARKKEEM 246
+ E +E KDKE VK LE+++E K+E+
Sbjct: 668 NAQEALEG--KDKEAINAVKEALEKAKEALGTAKQEL 702
>M.Javanica_Scaff5074g037707 on AAS67870 Leucyl aminopeptidase (Others) [Trypanosoma brucei]
Length = 671
Score = 26.6 bits (57), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 117 SSSSSRGKKIRKNDSPQEGLGYE 139
S +S+ GKK+ KN P+EG G E
Sbjct: 590 SKTSAGGKKLTKNAEPKEGKGKE 612
>M.Javanica_Scaff5074g037707 on XP_820184 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1050
Score = 26.2 bits (56), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 90 GYGHHIPIQTYGHARRGGGRKKHTGGAS 117
GYG P++ G RGGG G +S
Sbjct: 851 GYGTQQPVEEEGTNGRGGGSTSSVGASS 878
>M.Javanica_Scaff5074g037707 on XP_815842 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 894
Score = 26.2 bits (56), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 197 ENVLLTLGIANVEYHQPENIENRKKDKELYGKVKFLERSRELKARKKEEMTTKELADRIA 256
E+++ T GIA+ + E++E ++ K+ K +FLE +E R K +++ + +
Sbjct: 113 EDIIFT-GIASQLLTETEDVEQKEVMKDAKKKTQFLE--KEGSERNKVDVSRPTIVVKEN 169
Query: 257 DFYNNSGRVSN 267
D Y +G S+
Sbjct: 170 DIYMMAGTYSS 180
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff614g008193
(159 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff26241g092076
(98 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_807279 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.49
>M.Javanica_Scaff26241g092076 on XP_807279 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 872
Score = 25.8 bits (55), Expect = 0.49, Method: Composition-based stats.
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Query: 52 RRMETPMGLGRMGRWMETPMG-MGR 75
+R E P GL G W E P+G MG+
Sbjct: 577 KRREVPNGLTFKGSWAEWPVGDMGQ 601
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff338g005069
(1838 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum] 28 5.6
>M.Javanica_Scaff338g005069 on XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3954
Score = 28.1 bits (61), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 7/99 (7%)
Query: 142 LLTEEQYSVYVKAETIASRTVFEDSASIRASQKSISIFVQTDKAIYKPGSDVHYRVIVVT 201
+++++ +Y++A+T +RT F D Q+ + F + K I + S R I VT
Sbjct: 1177 VISKKYEELYLQAKTAFARTAFPDDDP--DYQQVVEFFKELQKEINRSASQRSKRSIDVT 1234
Query: 202 ---PELT-PYSEPVS-LYIEDPNQNRIVDTPKIELKKGV 235
P LT PYS ++ E N V T E K GV
Sbjct: 1235 NTDPTLTSPYSSAAGYIHQEIGNVGCNVQTQFCEKKNGV 1273
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff25281g090673
(157 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_815192 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.84
XP_811916 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.0
XP_814969 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 6.4
>M.Javanica_Scaff25281g090673 on XP_815192 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 722
Score = 26.6 bits (57), Expect = 0.84, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 13/86 (15%)
Query: 46 HRIALGAEPKQSAVFFGTHDLDKDGKLSVAE-------FVPLAFELSRKPVKEAEKVFQK 98
+++AL + K+++V+ L ++ L AE F A E+ PV V
Sbjct: 622 YQVALMLQGKKASVYIDGQSLGEEETLLTAERPLELAVFCFGACEIHNSPVT----VRNV 677
Query: 99 FDSNSDGFLSVDELKKEKISDGIIDG 124
F N LSVDEL+ K SDG + G
Sbjct: 678 FLYNRP--LSVDELRMVKKSDGSMHG 701
>M.Javanica_Scaff25281g090673 on XP_811916 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 685
Score = 23.9 bits (50), Expect = 5.0, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 13/86 (15%)
Query: 46 HRIALGAEPKQSAVFFGTHDLDKDGKLSVAE----FVPLAF---ELSRKPVKEAEKVFQK 98
+++AL + K+++V+ L ++ + E FV F ++ PV V
Sbjct: 585 YQVALMLQGKKASVYIDGQSLGEEETMLTGERPLEFVHFCFGACKMHNSPVT----VKNV 640
Query: 99 FDSNSDGFLSVDELKKEKISDGIIDG 124
F N LSVDEL+ K SDG + G
Sbjct: 641 FLYNRP--LSVDELRMVKKSDGSMHG 664
>M.Javanica_Scaff25281g090673 on XP_814969 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 258
Score = 23.5 bits (49), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 12/18 (66%), Positives = 13/18 (72%)
Query: 107 LSVDELKKEKISDGIIDG 124
LSVDELK K SDG + G
Sbjct: 220 LSVDELKMVKKSDGSMHG 237
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3178g027642
(91 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349207 EBA-175 (Adhesin) [Plasmodium falciparum] 22 5.9
>M.Javanica_Scaff3178g027642 on XP_001349207 EBA-175 (Adhesin) [Plasmodium falciparum]
Length = 1462
Score = 22.3 bits (46), Expect = 5.9, Method: Composition-based stats.
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 3 VRINRVASFFSSLLNN 18
VR++R+ SF S +NN
Sbjct: 129 VRVSRILSFLDSRINN 144
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2589g023954
(595 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAL38220 PfNBP1 (Adhesin) [Plasmodium falciparum] 28 1.3
AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum] 28 1.4
AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum] 28 1.4
AAL38218 PfNBP1 (Adhesin) [Plasmodium falciparum] 28 1.4
AAL38222 PfNBP1 (Adhesin) [Plasmodium falciparum] 28 1.5
XP_001609167 variant erythrocyte surface antigen-1, alpha subun... 27 4.3
XP_814620 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 4.8
ACB87908 Rh5 (Adhesin) [Plasmodium falciparum] 26 7.5
>M.Javanica_Scaff2589g023954 on AAL38220 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2957
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 26/44 (59%)
Query: 411 LLNETSAALKADQKASNDAMENMKKQIKRVENELEDALAKAEKS 454
LLNE + L D ++N+ ++NM +I ++N + + +A KS
Sbjct: 1789 LLNEQALKLFVDINSTNNNLDNMLSEINSIQNNIHTYIQEANKS 1832
>M.Javanica_Scaff2589g023954 on AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2965
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 26/44 (59%)
Query: 411 LLNETSAALKADQKASNDAMENMKKQIKRVENELEDALAKAEKS 454
LLNE + L D ++N+ ++NM +I ++N + + +A KS
Sbjct: 1795 LLNEQALKLFVDINSTNNNLDNMLSEINSIQNNIHTYIQEANKS 1838
>M.Javanica_Scaff2589g023954 on AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2969
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 26/44 (59%)
Query: 411 LLNETSAALKADQKASNDAMENMKKQIKRVENELEDALAKAEKS 454
LLNE + L D ++N+ ++NM +I ++N + + +A KS
Sbjct: 1791 LLNEQALKLFVDINSTNNNLDNMLSEINSIQNNIHTYIQEANKS 1834
>M.Javanica_Scaff2589g023954 on AAL38218 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2977
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 26/44 (59%)
Query: 411 LLNETSAALKADQKASNDAMENMKKQIKRVENELEDALAKAEKS 454
LLNE + L D ++N+ ++NM +I ++N + + +A KS
Sbjct: 1799 LLNEQALKLFVDINSTNNNLDNMLSEINSIQNNIHTYIQEANKS 1842
>M.Javanica_Scaff2589g023954 on AAL38222 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2976
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 26/44 (59%)
Query: 411 LLNETSAALKADQKASNDAMENMKKQIKRVENELEDALAKAEKS 454
LLNE + L D ++N+ ++NM +I ++N + + +A KS
Sbjct: 1802 LLNEQALKLFVDINSTNNNLDNMLSEINSIQNNIHTYIQEANKS 1845
>M.Javanica_Scaff2589g023954 on XP_001609167 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1317
Score = 26.9 bits (58), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 42/92 (45%), Gaps = 7/92 (7%)
Query: 428 DAMENMKKQIKRVENELEDALAKAEKSNSNEDWANVDRISVKASRAGVEAAKLG---RQI 484
D +E K ++ + + ELE + K K N + +R G KLG +++
Sbjct: 699 DKLEGAKGELVKAQKELEAEVQKVNKGGLNGKLGAAKNKLEELTRNGRSNGKLGEVVQKL 758
Query: 485 AENAEKG----MDAIKEMKELENLMNKQVEAQ 512
+A+ G +AI ++ E+ L+ + E++
Sbjct: 759 GGDADPGKNKISEAINKVYEVLTLLKEWSESE 790
>M.Javanica_Scaff2589g023954 on XP_814620 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 931
Score = 26.6 bits (57), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 168 IAGNGDSWISSVCEKVPTTTVTNAKRYQR 196
I G GDS +S+ E+ + TVTN Y R
Sbjct: 688 IGGGGDSAVSTGIEEEMSVTVTNVLLYNR 716
>M.Javanica_Scaff2589g023954 on ACB87908 Rh5 (Adhesin) [Plasmodium falciparum]
Length = 526
Score = 25.8 bits (55), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 20/108 (18%)
Query: 365 KEDDKVGKDSPLKIVNSKTNALTKWMNDIKKLLKSDKKIDLNEGQKLLNETSAALKADQK 424
K+D K GKD +I N K N T D +KS ++N+G K L
Sbjct: 51 KDDIKNGKDIKKEIDNDKENIKTNNAKDHSTYIKSYLNTNVNDGLKYL------------ 98
Query: 425 ASNDAMENMKKQIKR--VENELEDALAKAEKSN--SNEDWANVDRISV 468
+ + IK+ V N++ D + EK++ +NED+ NVD +V
Sbjct: 99 ----FIPSHNSFIKKYSVFNQINDGMLLNEKNDVKNNEDYKNVDYKNV 142
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7510g048385
(71 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum] 22 6.8
AAL38220 PfNBP1 (Adhesin) [Plasmodium falciparum] 22 6.9
AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum] 22 6.9
AAL38222 PfNBP1 (Adhesin) [Plasmodium falciparum] 22 6.9
AAL38218 PfNBP1 (Adhesin) [Plasmodium falciparum] 22 6.9
>M.Javanica_Scaff7510g048385 on AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2965
Score = 21.6 bits (44), Expect = 6.8, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 44 QLISNPNDLENPYQSAFGGINILTTTNF 71
Q+I N++EN + NIL TN+
Sbjct: 1543 QIIQYTNEIENIFNEIKNINNILVLTNY 1570
>M.Javanica_Scaff7510g048385 on AAL38220 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2957
Score = 21.6 bits (44), Expect = 6.9, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 44 QLISNPNDLENPYQSAFGGINILTTTNF 71
Q+I N++EN + NIL TN+
Sbjct: 1537 QIIQYTNEIENIFNEIKNINNILVLTNY 1564
>M.Javanica_Scaff7510g048385 on AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2969
Score = 21.6 bits (44), Expect = 6.9, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 44 QLISNPNDLENPYQSAFGGINILTTTNF 71
Q+I N++EN + NIL TN+
Sbjct: 1539 QIIQYTNEIENIFNEIKNINNILVLTNY 1566
>M.Javanica_Scaff7510g048385 on AAL38222 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2976
Score = 21.6 bits (44), Expect = 6.9, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 44 QLISNPNDLENPYQSAFGGINILTTTNF 71
Q+I N++EN + NIL TN+
Sbjct: 1550 QIIQYTNEIENIFNEIKNINNILVLTNY 1577
>M.Javanica_Scaff7510g048385 on AAL38218 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2977
Score = 21.6 bits (44), Expect = 6.9, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 44 QLISNPNDLENPYQSAFGGINILTTTNF 71
Q+I N++EN + NIL TN+
Sbjct: 1547 QIIQYTNEIENIFNEIKNINNILVLTNY 1574
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff622g008256
(184 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_810391 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.1
XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum] 24 8.1
>M.Javanica_Scaff622g008256 on XP_810391 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 885
Score = 24.3 bits (51), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 24/92 (26%)
Query: 13 IVLLIVLIECV-------KNEGRRGAGRGRGRGGRGRGRAHEVQPFIQTSS----FVPPS 61
++LL+V++ C +N G+R G GG+G GR+ P T++ F P
Sbjct: 47 VLLLLVVMMCAAVGPVQAQNRGKR---VGDFYGGQGSGRSPREYPVADTAAAGHIFHNPH 103
Query: 62 LLESSALQEVNVHGQSLE--GPNISGPTAEGS 91
L VNV G L G +G GS
Sbjct: 104 L--------VNVDGMLLAIVGAQFNGSVRSGS 127
>M.Javanica_Scaff622g008256 on XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2178
Score = 23.9 bits (50), Expect = 8.1, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 98 GVQGGGGPSGSVTHDSNVEGPNEEG 122
G GG GPS D N+E + +G
Sbjct: 754 GAPGGAGPSPDTGTDDNLEDIDSDG 778
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff31267g098490
(295 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_808081 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 5.1
>M.Javanica_Scaff31267g098490 on XP_808081 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 893
Score = 25.4 bits (54), Expect = 5.1, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 16/21 (76%)
Query: 109 GNNKSIQKFLPKLEKRRDEEK 129
G+NK +KF+ EK++++EK
Sbjct: 422 GDNKEEEKFIALYEKKKEDEK 442
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2565g023788
(198 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_818346 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.3
XP_966160 PfEMP1 (Establishment) [Plasmodium falciparum] 25 5.6
XP_809996 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.6
XP_808396 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.6
XP_001351321 PfEMP1 (Establishment) [Plasmodium falciparum] 25 5.8
XP_804800 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 8.3
>M.Javanica_Scaff2565g023788 on XP_818346 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 927
Score = 25.8 bits (55), Expect = 2.3, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 30/69 (43%)
Query: 63 NSNTGISSQIQNNPSRELVVIRQPEEQHRARYASEGSRGAVKDRSGTSYCSIQITSRKYF 122
NS TGI+SQI + V +++ + ++ EG+ K + S + + +
Sbjct: 118 NSFTGIASQIITKDNANTPVEALTDQKDKTQFLEEGTSDDPKKKVDVSRPTTVVEGNDIY 177
Query: 123 QLNGYYRPT 131
L G Y T
Sbjct: 178 MLVGKYSRT 186
>M.Javanica_Scaff2565g023788 on XP_966160 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2394
Score = 24.6 bits (52), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
Query: 34 NNQQLNYEFWQQQNSSQFKITRNDNLNLYNSNTGISSQ 71
+ + +N++ W+ ++ T NDN L N NTG Q
Sbjct: 522 DTEHINHDIWK----CHYENTDNDNCILQNENTGSEKQ 555
>M.Javanica_Scaff2565g023788 on XP_809996 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 787
Score = 24.3 bits (51), Expect = 5.6, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 175 KNNGSECLEIILRPENRMIGMKKY 198
K G+E L+++LRP M G K +
Sbjct: 173 KAEGNEGLDVVLRPTTTMKGNKVF 196
>M.Javanica_Scaff2565g023788 on XP_808396 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 786
Score = 24.3 bits (51), Expect = 5.6, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 175 KNNGSECLEIILRPENRMIGMKKY 198
K G+E L+++LRP M G K +
Sbjct: 172 KAEGNEGLDVVLRPTTTMKGNKVF 195
>M.Javanica_Scaff2565g023788 on XP_001351321 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3467
Score = 24.6 bits (52), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 7/24 (29%), Positives = 18/24 (75%)
Query: 33 INNQQLNYEFWQQQNSSQFKITRN 56
+N+ ++Y+FW ++ ++FKI ++
Sbjct: 367 CSNKCVDYDFWLEKQQNEFKIQKD 390
>M.Javanica_Scaff2565g023788 on XP_804800 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 940
Score = 23.9 bits (50), Expect = 8.3, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 22/53 (41%)
Query: 58 NLNLYNSNTGISSQIQNNPSRELVVIRQPEEQHRARYASEGSRGAVKDRSGTS 110
+L L N N G+ + + V +EQ + +SE S G K G S
Sbjct: 763 DLKLLNGNEGVGGGSTSTSAPSTVTTSLGKEQSTIQLSSETSPGGTKTVDGGS 815
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5240g038492
(85 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum] 24 1.2
XP_845139 VSG (Establishment) [Trypanosoma brucei] 23 2.8
XP_811406 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 7.5
XP_808402 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 8.8
XP_807740 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 9.0
>M.Javanica_Scaff5240g038492 on XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum]
Length = 3130
Score = 24.3 bits (51), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 5/27 (18%)
Query: 18 NESNAKTKKAKKKDAHPKNTEKDKIKE 44
NESN K DAH NT+ DK+KE
Sbjct: 1320 NESNGL-----KSDAHNNNTQVDKLKE 1341
>M.Javanica_Scaff5240g038492 on XP_845139 VSG (Establishment) [Trypanosoma brucei]
Length = 533
Score = 23.1 bits (48), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 10/50 (20%)
Query: 19 ESNAKTKKAKKKDAHPKNTEKDKIKESETLKPPEKVDEG-TNDKSNKKQF 67
ESN T+ KKKD KE+E KP EK + G DK N F
Sbjct: 473 ESNRYTRHTKKKDCE---------KENEGHKPGEKANCGRIEDKCNDSSF 513
>M.Javanica_Scaff5240g038492 on XP_811406 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 924
Score = 21.9 bits (45), Expect = 7.5, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 56 EGTNDKSNKKQFKKQKKNKNKEKKIDSSK 84
E ND + K QF ++ + +KK+D S+
Sbjct: 143 EIMNDANTKTQFLEESISAGPKKKVDVSR 171
>M.Javanica_Scaff5240g038492 on XP_808402 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 846
Score = 21.9 bits (45), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 59 NDKSNKKQFKKQKKNKNKEKKIDSSK 84
ND + K QF + + + E+K+D S+
Sbjct: 150 NDANTKTQFLVKGPSADAEQKVDVSR 175
>M.Javanica_Scaff5240g038492 on XP_807740 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 681
Score = 21.6 bits (44), Expect = 9.0, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 56 EGTNDKSNKKQFKKQKKNKNKEKKIDSSK 84
E ND + K QF ++ + +KK+D S+
Sbjct: 138 EIMNDANTKTQFLEESISAGPKKKVDVSR 166
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4463g034726
(66 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAK07772 MSA-1 (Invasion) [Babesia bovis] 25 0.38
AAK07771 MSA-1 (Invasion) [Babesia bovis] 25 0.44
>M.Javanica_Scaff4463g034726 on AAK07772 MSA-1 (Invasion) [Babesia bovis]
Length = 339
Score = 24.6 bits (52), Expect = 0.38, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Query: 11 NFLHMYQVRESTRYEAKNRASTRK------KRPVRKYERFSKFQTLITVEEFFNYRNNF 63
N HMY+ +S ++EA+ RK K+ V+K E +++ +FF ++ ++
Sbjct: 143 NIHHMYEYLKSLKWEAQLTEEDRKKAEDYFKQHVQKTETNVDVNSMVAFLKFFFHQESY 201
>M.Javanica_Scaff4463g034726 on AAK07771 MSA-1 (Invasion) [Babesia bovis]
Length = 334
Score = 24.6 bits (52), Expect = 0.44, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Query: 11 NFLHMYQVRESTRYEAKNRASTRK------KRPVRKYERFSKFQTLITVEEFFNYRNNF 63
N HMY+ +S ++EA+ RK K+ V+K E +++ +FF ++ ++
Sbjct: 143 NIHHMYEYLKSLKWEAQLTEEDRKKAEDYFKQHVQKTETNVDVNSMVAFLKFFFHQESY 201
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3636g030287
(252 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_805195 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.92
XP_001611206 variant erythrocyte surface antigen-1, alpha subun... 27 1.3
XP_805196 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.4
XP_001349578 MSP2 (Invasion) [Plasmodium falciparum] 25 3.4
XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum] 26 3.6
ABB59609 CSP (Invasion) [Plasmodium falciparum] 23 7.4
ABB59608 CSP (Invasion) [Plasmodium falciparum] 23 7.5
>M.Javanica_Scaff3636g030287 on XP_805195 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 769
Score = 27.3 bits (59), Expect = 0.92, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
Query: 15 LFNIQSEGELIQVEVKIKNDWKGKREF---IYLKNFEIKKRFVLNKIEKNNNQFASFDKN 71
L + EG + + + N WKG+RE +YL + + F + + NN+ N
Sbjct: 397 LITVTIEGRKVMLYTQRGNFWKGQREMFNALYLWVTDNNRSFHVGPVAMYNNKNWDLASN 456
Query: 72 I---DGYLRLIE 80
+ DG L L++
Sbjct: 457 LLYSDGSLHLLQ 468
>M.Javanica_Scaff3636g030287 on XP_001611206 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1285
Score = 26.9 bits (58), Expect = 1.3, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Query: 132 EINLIGYKIELLEKQKVEYSKELKSRIIYIGNKISEIN------EGTKRHCFN 178
E++ + K++ LE +K E KE+K ++ IGN + ++ EG + N
Sbjct: 630 ELDGVMKKVKALEGEKTEGIKEVKDVLVTIGNVVVQLGNAQEALEGKDKEAIN 682
>M.Javanica_Scaff3636g030287 on XP_805196 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 731
Score = 26.9 bits (58), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
Query: 15 LFNIQSEGELIQVEVKIKNDWKGKREF---IYLKNFEIKKRFVLNKIEKNNNQFASFDKN 71
L + EG + + + N WKG+RE +YL + + F + + NN+ N
Sbjct: 359 LITVTIEGRKVMLYTQRGNFWKGQREMFNALYLWVTDNNRSFHVGPVAMYNNKNWDLASN 418
Query: 72 I---DGYLRLIE 80
+ DG L L++
Sbjct: 419 LLYSDGSLHLLQ 430
>M.Javanica_Scaff3636g030287 on XP_001349578 MSP2 (Invasion) [Plasmodium falciparum]
Length = 272
Score = 25.4 bits (54), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 9/21 (42%), Positives = 16/21 (76%)
Query: 1 MIKFIFLIILFLFILFNIQSE 21
+IK + +I F+F+ FNI++E
Sbjct: 3 VIKTLSIINFFIFVTFNIKNE 23
>M.Javanica_Scaff3636g030287 on XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3119
Score = 25.8 bits (55), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 136 IGYKIELLEKQKVEYSKELKSRIIYIGNKISEINEGTKRHCFN 178
+G + E KQK +Y+KE+++ + G S IN G + +N
Sbjct: 374 LGNQREAFRKQKEKYAKEIEAYVTNRGIPKSSINNGYYKDFYN 416
>M.Javanica_Scaff3636g030287 on ABB59609 CSP (Invasion) [Plasmodium falciparum]
Length = 77
Score = 23.1 bits (48), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 60 KNNNQFASFDKNIDGYLRLIE--LNTDRNIFNVKLSN 94
KNNN DK+I+ YLR I+ L+T+ + +V N
Sbjct: 1 KNNNNEEPSDKHIEQYLRNIQNSLSTEWSPCSVTCGN 37
>M.Javanica_Scaff3636g030287 on ABB59608 CSP (Invasion) [Plasmodium falciparum]
Length = 77
Score = 23.1 bits (48), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 60 KNNNQFASFDKNIDGYLRLIE--LNTDRNIFNVKLSN 94
KNNN DK+I+ YLR I+ L+T+ + +V N
Sbjct: 1 KNNNNEEPSDKHIEQYLRNIQNSLSTEWSPCSVTCGN 37
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff25935g091637
(93 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_815166 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.58
XP_001609167 variant erythrocyte surface antigen-1, alpha subun... 25 0.63
XP_804330 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.0
XP_810574 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.5
XP_817719 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.0
>M.Javanica_Scaff25935g091637 on XP_815166 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 894
Score = 25.4 bits (54), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 15 MSGEVVPMTGEVVPMTGEVVPMTGEVVPMKREVV-PMTGEV 54
M G P T EV +GE M G KRE + P GEV
Sbjct: 811 MRGNGSPQTPEVGASSGEDGEMAGGTDGQKREAIHPHNGEV 851
>M.Javanica_Scaff25935g091637 on XP_001609167 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1317
Score = 25.4 bits (54), Expect = 0.63, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 12/72 (16%)
Query: 3 GEVVPMTGEVVPMSGEVVPMTGEVVPMTGEVVPMTG------------EVVPMKREVVPM 50
G V M +V ++GEV EV+ GEVV G E+ +K ++
Sbjct: 645 GRVENMKKGLVGVNGEVALKVKEVLQKIGEVVVQLGNAQEALEGRKGEEITKVKDKLEGA 704
Query: 51 TGEVVPMKREAD 62
GE+V ++E +
Sbjct: 705 KGELVKAQKELE 716
>M.Javanica_Scaff25935g091637 on XP_804330 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 910
Score = 24.6 bits (52), Expect = 1.0, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 26/68 (38%)
Query: 16 SGEVVPMTGEVVPMTGEVVPMTGEVVPMKREVVPMTGEVVPMKREADPSNDPSMSSTSPL 75
S V P+T V T VP P E + G VP + + ++++P
Sbjct: 709 SSSVEPLTTSVTTETQPTVPSPTPAGPQPTEQATLNGSSVPSGGAPSTPEELNAATSTPA 768
Query: 76 NLTSIPSN 83
L + S+
Sbjct: 769 ELNAATSS 776
>M.Javanica_Scaff25935g091637 on XP_810574 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 954
Score = 24.3 bits (51), Expect = 1.5, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 25/69 (36%)
Query: 16 SGEVVPMTGEVVPMTGEVVPMTGEVVPMKREVVPMTGEVVPMKREADPSNDPSMSSTSPL 75
S V P+T V VP P E + G VP + + ++++P
Sbjct: 742 SPPVEPLTTSVTTEMQPTVPSPATAGPQPTEQATLNGSSVPSGGAPSTPEELNAATSTPE 801
Query: 76 NLTSIPSNP 84
L + S P
Sbjct: 802 ELNAATSTP 810
>M.Javanica_Scaff25935g091637 on XP_817719 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1053
Score = 23.5 bits (49), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Query: 9 TGEVVPMSG-EVVPMTGEVVPMTGEVVP 35
TG+V G EV GE VP TG+ P
Sbjct: 957 TGDVSRTEGDEVSSENGEEVPQTGDTAP 984
Score = 23.5 bits (49), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Query: 2 TGEVVPMTG-EVVPMSGEVVPMTGEVVP 28
TG+V G EV +GE VP TG+ P
Sbjct: 957 TGDVSRTEGDEVSSENGEEVPQTGDTAP 984
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4380g034309
(100 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_809659 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.1
>M.Javanica_Scaff4380g034309 on XP_809659 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 796
Score = 24.6 bits (52), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 23 YLQHFSKALIHSGGVLLAFQQLPVCVIYDHAPVIV 57
+ F+ +L+ +GGV+ AF + V YD V++
Sbjct: 107 WNSFFAPSLVSAGGVIAAFAEGYVYGHYDTDDVLI 141
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff26613g092614
(53 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7830g049635
(235 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_818848 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.2
>M.Javanica_Scaff7830g049635 on XP_818848 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1053
Score = 24.6 bits (52), Expect = 6.2, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 20/51 (39%), Gaps = 12/51 (23%)
Query: 89 YKDYNTFFYPNEYMSHNYC------------RSTSLNLYEYNKEISNATFH 127
Y +YN + +SH Y T N+ YNK +SN T H
Sbjct: 660 YTEYNQRLFDTHRISHFYIGGDSKNQSATGGHVTVTNVMLYNKILSNYTLH 710
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7714g049179
(128 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAN16379 MIC11 (Others) [Toxoplasma gondii] 27 0.19
XP_818396 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.1
XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum] 23 5.2
XP_001350409 PfEMP1 (Establishment) [Plasmodium falciparum] 23 6.3
XP_815166 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 6.9
XP_001349034 PfEMP1 (Establishment) [Plasmodium falciparum] 23 7.3
>M.Javanica_Scaff7714g049179 on AAN16379 MIC11 (Others) [Toxoplasma gondii]
Length = 204
Score = 27.3 bits (59), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 16/93 (17%)
Query: 1 MKIYNLILLNFYFLNLFSLSFGKYPGGSSTDPGEGS------GSPQTSENYFNQLCKQIS 54
M++ L +++ L LF K+ G S EG GS + NQ+ + +
Sbjct: 1 MQLKKLSVVSITLLGLF-----KFVNGVS----EGVVVPVRFGSETARADLLNQVSETVF 51
Query: 55 PLLETAGDSKPCQELTSKDYRHILCREKIVNVR 87
L+ET D K + +R L +E +V V+
Sbjct: 52 SLVETTEDDKSAASIVRGAFRSAL-KEILVAVK 83
>M.Javanica_Scaff7714g049179 on XP_818396 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1044
Score = 23.9 bits (50), Expect = 4.1, Method: Composition-based stats.
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 22 GKYPGGSSTDPGEGSGSPQT 41
GK GGS+ + GE SG+ T
Sbjct: 805 GKATGGSAGEDGESSGAADT 824
>M.Javanica_Scaff7714g049179 on XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2178
Score = 23.5 bits (49), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 13/66 (19%)
Query: 60 AGDSKPCQELTSKDYRHIL----------CRE---KIVNVRQQYDILVKAYKAKLNYIDT 106
+GD + C+E+ +DY I CR+ I R ++D KAY + + T
Sbjct: 1198 SGDGEDCEEVRKQDYSKISNFNCPGCGRECRKYKNWIKTKRTEFDEQKKAYVDRKDKYKT 1257
Query: 107 NNQKLE 112
N+ E
Sbjct: 1258 ENKGAE 1263
>M.Javanica_Scaff7714g049179 on XP_001350409 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2223
Score = 23.5 bits (49), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 46 FNQLCKQISPLLETAGDSKPCQELTSKDYRHILCREKIVNVRQ-QYDILVKAYKAKLNYI 104
+N++ K++ P + G+ C+ +K + C K V ++ +++ + + Y K NY
Sbjct: 1523 YNRIQKKLKPCM-NDGNESSCR---NKCKKKCDCVGKWVEEKKNEWEKIKEHYVDKYNYK 1578
Query: 105 DTNN 108
DTNN
Sbjct: 1579 DTNN 1582
>M.Javanica_Scaff7714g049179 on XP_815166 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 894
Score = 23.1 bits (48), Expect = 6.9, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 18 SLSFGKYPGGSSTDPGEGSGSPQTSE 43
S F + G D G+GSPQT E
Sbjct: 796 SSDFAQTVGSEVGDTMRGNGSPQTPE 821
>M.Javanica_Scaff7714g049179 on XP_001349034 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 23.1 bits (48), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 81 EKIVNVRQQYDILVKAYKAKL 101
E I N R+Q+D VK YK ++
Sbjct: 400 EWIENQRKQFDKQVKKYKTEI 420
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3811g031314
(126 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAW78167 TRAP (Invasion) [Plasmodium falciparum] 24 4.3
XP_829763 VSG (Establishment) [Trypanosoma brucei] 23 4.4
XP_951757 VSG (Establishment) [Trypanosoma brucei] 23 4.4
AAW78156 TRAP (Invasion) [Plasmodium falciparum] 23 4.5
XP_803413 VSG (Establishment) [Trypanosoma brucei] 23 5.3
>M.Javanica_Scaff3811g031314 on AAW78167 TRAP (Invasion) [Plasmodium falciparum]
Length = 575
Score = 23.9 bits (50), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 5/35 (14%)
Query: 51 ENGETP-----PKNSENPANSENSGNDVTPKNGGN 80
EN E P P N ENP+N EN N P N N
Sbjct: 347 ENPENPSNPENPSNPENPSNPENPSNPENPSNPEN 381
Score = 22.7 bits (47), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 57 PKNSENPANSENSGNDVTPKNGGN 80
P N ENP+N EN N P N N
Sbjct: 364 PSNPENPSNPENPSNPENPSNPEN 387
>M.Javanica_Scaff3811g031314 on XP_829763 VSG (Establishment) [Trypanosoma brucei]
Length = 476
Score = 23.5 bits (49), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 3/43 (6%)
Query: 39 GPCENNYCSGKLENGETPPKNSENPANSENSGNDVTPKNGGNS 81
G CE +GK GE K E +EN G T G NS
Sbjct: 422 GKCEWKEINGK---GECKSKTGEEGVKAENEGKTTTNTTGRNS 461
>M.Javanica_Scaff3811g031314 on XP_951757 VSG (Establishment) [Trypanosoma brucei]
Length = 476
Score = 23.5 bits (49), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 15/34 (44%)
Query: 48 GKLENGETPPKNSENPANSENSGNDVTPKNGGNS 81
G + G PKN E EN G T GGNS
Sbjct: 417 GTEDKGTCKPKNEEEGVKVENDGKTNTNTTGGNS 450
>M.Javanica_Scaff3811g031314 on AAW78156 TRAP (Invasion) [Plasmodium falciparum]
Length = 581
Score = 23.5 bits (49), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 5/35 (14%)
Query: 51 ENGETP-----PKNSENPANSENSGNDVTPKNGGN 80
EN E P P N ENP+N EN N P N N
Sbjct: 347 ENPENPSNPENPSNPENPSNPENPSNPENPSNPEN 381
Score = 22.7 bits (47), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 57 PKNSENPANSENSGNDVTPKNGGN 80
P N ENP+N EN N P N N
Sbjct: 364 PSNPENPSNPENPSNPENPSNPEN 387
Score = 22.7 bits (47), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 57 PKNSENPANSENSGNDVTPKNGGN 80
P N ENP+N EN N P N N
Sbjct: 370 PSNPENPSNPENPSNPENPSNPEN 393
>M.Javanica_Scaff3811g031314 on XP_803413 VSG (Establishment) [Trypanosoma brucei]
Length = 486
Score = 23.5 bits (49), Expect = 5.3, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 60 SENPANSENSGNDVT-PKNGGNSQTSSDCK 88
+ENP+ ++ + K+G N T++DCK
Sbjct: 411 TENPSKKTDTEDKTEEKKDGDNKTTAADCK 440
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4933g037020
(236 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_805175 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.54
XP_803124 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.2
XP_804448 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.5
XP_810614 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.2
XP_807173 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.8
>M.Javanica_Scaff4933g037020 on XP_805175 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 728
Score = 28.1 bits (61), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 164 GRSGFDNSER--SYSSAVGWARGXFRIVESGTPWYGSMRLDKL-NRTIPGRSGFDNSERS 220
G+S F++ + ++S AVG G + + G PW S+ + L TI GR ++R
Sbjct: 319 GQSVFESRDMGTTWSKAVGALSGVWTKSKPGAPWDKSLHVGALITATIEGRKVMLYTQRG 378
Query: 221 YSSA 224
Y+S
Sbjct: 379 YTSG 382
>M.Javanica_Scaff4933g037020 on XP_803124 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 620
Score = 26.2 bits (56), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 174 SYSSAVGWARGXFRIVESGTPWYGSMRLDKL-NRTIPGRSGFDNSERSYS 222
+++ AV G + +SG PW S+ +D L TI GR ++R Y+
Sbjct: 174 TWTEAVRTLPGVWTKSKSGAPWDKSLHVDALITATIEGRKVMLYTQRGYA 223
>M.Javanica_Scaff4933g037020 on XP_804448 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 748
Score = 25.8 bits (55), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 162 IPGRSGFDNSE--RSYSSAVGWARGXFRIVESGTPWYGSMRLDKL-NRTIPGRSGFDNSE 218
+ G+S F++ + ++++ A+G G + SG W +R+D L TI R ++
Sbjct: 334 VDGQSVFESRDMGKTWTEAIGTLPGIWVRPRSGVSWDEGLRVDALITATIEERKVMLYTQ 393
Query: 219 RSYSSAVG 226
R Y+S G
Sbjct: 394 RGYASGEG 401
>M.Javanica_Scaff4933g037020 on XP_810614 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 728
Score = 25.0 bits (53), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 147 TPWYGS--MRLDKLNRTIPGRSGFDNSE--RSYSSAVGWARGXFRIVESGTPWYGSMRLD 202
T W GS M +D N G+S F++ + ++++ AVG G + SG W +R+D
Sbjct: 313 TEWKGSLLMIVDCEN----GQSVFESRDMGKTWTEAVGTLSGVWVKSRSGFRWDEGLRVD 368
Query: 203 KL-NRTIPGRSGFDNSERSYSSA 224
L TI G ++R Y+S
Sbjct: 369 ALITATIEGMKVMLYTQRGYASG 391
>M.Javanica_Scaff4933g037020 on XP_807173 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 734
Score = 25.0 bits (53), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 173 RSYSSAVGWARGXFRIVESGTPWYGSMRLDKL-NRTIPGRSGFDNSERSYSSA 224
++++ A+G G + SG W +R+D L TI GR ++R Y+S
Sbjct: 345 KTWTEAIGTLSGVWVKSRSGFRWDEGLRVDALITATIEGRKVMLYTQRGYASG 397
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff261g004134
(280 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_808639 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.29
XP_001610568 variant erythrocyte surface antigen-1, alpha subun... 27 2.2
XP_818399 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 3.8
XP_001608665 variant erythrocyte surface antigen-1, alpha subun... 25 7.2
XP_001609565 variant erythrocyte surface antigen-1, alpha subun... 25 7.6
>M.Javanica_Scaff261g004134 on XP_808639 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 949
Score = 29.3 bits (64), Expect = 0.29, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 5/48 (10%)
Query: 208 RGQPPPPSIQTGNRGIETPFGQAGQFIRLITNTIREVRERGNNGGGGG 255
+G PPP +I+ TP GQ T +E+ + N G GG
Sbjct: 743 KGTPPPEAIKPATLETGTPSSLGGQ-----QQTEQELLRKSENAGSGG 785
>M.Javanica_Scaff261g004134 on XP_001610568 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1329
Score = 26.6 bits (57), Expect = 2.2, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 20/51 (39%)
Query: 26 GLPQSLDPFLEKLFETPECEVFISDSSFLAVSTIECHPFKCNFPYQLCMRP 76
G+P L FLE C+V +D+S H CN Q C P
Sbjct: 883 GVPSPLQAFLEDRLPGFSCDVVRNDNSEQPYPPAASHLGHCNGSGQCCPLP 933
>M.Javanica_Scaff261g004134 on XP_818399 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 953
Score = 25.8 bits (55), Expect = 3.8, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 211 PPPPSIQTGNRGIETPFGQAGQ 232
PPP +I+ ETP G GQ
Sbjct: 757 PPPEAIKQATPEAETPSGPGGQ 778
>M.Javanica_Scaff261g004134 on XP_001608665 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1326
Score = 24.6 bits (52), Expect = 7.2, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 26/68 (38%), Gaps = 3/68 (4%)
Query: 24 IKGLPQSLDPFLEKLFETPECEVFISDSSFLAVSTIECHPFKCNFPYQLCMRP---SNQY 80
+ G P L FLE C+V ++ S H CN Q C P Q+
Sbjct: 897 MDGFPSPLQAFLEDRLPGFSCDVVRNNDSEQPYPPAASHLGHCNGSGQCCPLPMGFRGQF 956
Query: 81 QNEAANNC 88
+ + ++C
Sbjct: 957 YSGSISDC 964
>M.Javanica_Scaff261g004134 on XP_001609565 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1341
Score = 24.6 bits (52), Expect = 7.6, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 22/66 (33%), Gaps = 3/66 (4%)
Query: 26 GLPQSLDPFLEKLFETPECEVFISDSSFLAVSTIECHPFKCNFPYQLCMRP---SNQYQN 82
G+P L FLE C+ + H CN Q C P Q+Q
Sbjct: 896 GVPSPLQAFLEDRLPGFSCQNVVDQDENPEYPPAASHLGHCNGSGQCCPLPMGFRGQFQK 955
Query: 83 EAANNC 88
+ +C
Sbjct: 956 DGIRDC 961
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3251g028066
(317 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAX07972 alpha-18 giardin (Others) [Giardia duodenalis] 29 0.26
XP_001351876 PfEMP1 (Establishment) [Plasmodium falciparum] 29 0.37
XP_001608665 variant erythrocyte surface antigen-1, alpha subun... 28 0.65
XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum] 27 1.9
XP_001609040 variant erythrocyte surface antigen-1, alpha subun... 26 4.5
>M.Javanica_Scaff3251g028066 on AAX07972 alpha-18 giardin (Others) [Giardia duodenalis]
Length = 255
Score = 29.3 bits (64), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 19/91 (20%)
Query: 132 LYESWLPMK----------FQDYIPEGWREKIITIITSELDKLAAVWDTLAKYKTLEHVW 181
L WLP K F++ +P IT E ++ +++T AK ++
Sbjct: 63 LINMWLPTKILRLRVLERNFKELVPLELAHCAITCPQEEFVEICDIYNTTAK----ASLY 118
Query: 182 KALKRNTPTLASLLEDAWKIIKQRWAKFNGG 212
++R + + WK + Q+W FN G
Sbjct: 119 AGIRRQC-----IGPEPWKYLVQQWVTFNHG 144
>M.Javanica_Scaff3251g028066 on XP_001351876 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3164
Score = 29.3 bits (64), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%)
Query: 253 NSLTKAFPAVEPYLTKLSESEVFSKWAADLAGEEEEELKK 292
N +TK P++E ++ + F++WA + E +E+LKK
Sbjct: 2270 NDMTKLTPSLEEFVKRPQFLRWFTEWAEEFCNERKEQLKK 2309
>M.Javanica_Scaff3251g028066 on XP_001608665 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1326
Score = 28.5 bits (62), Expect = 0.65, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 23/36 (63%)
Query: 282 LAGEEEEELKKKKEKEEEEKKKDEEGKKKEGVKSEL 317
L G++ E ++K KE+ E K K E+ KK+G+ +L
Sbjct: 719 LEGKKTEAIEKVKEELTEAKTKLEDAVKKDGLTGKL 754
>M.Javanica_Scaff3251g028066 on XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2858
Score = 26.9 bits (58), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 61/151 (40%), Gaps = 16/151 (10%)
Query: 180 VWKALKRNTPTLASLLE----DAWKIIKQRWAKFNGGLEPEAKEYMHDVKTSFGHWLSDK 235
VW+AL + P A + + + + + N G P +Y+ F W +
Sbjct: 255 VWEALTCSAPYYADYFKKKSGNTYNFTTEGYCGRNEGAPPTNLDYVPQFLRWFDEWAEE- 313
Query: 236 VLVPFKNLP----PKTSTNVRNSLTKAFPAVEPYLTKLSESEVF-----SKWAADLAGEE 286
KN+ K+ T N+ + + T L +E+F + A D E
Sbjct: 314 -FCRIKNIKIGNIKKSCTGESNNKHCSREGYDCNKTNLRLNEIFMDLECPRCADDCKSYE 372
Query: 287 E-EELKKKKEKEEEEKKKDEEGKKKEGVKSE 316
E KKK+ +++EK K+E + K GV SE
Sbjct: 373 TWVENKKKEFNKQKEKYKEEINESKPGVNSE 403
>M.Javanica_Scaff3251g028066 on XP_001609040 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1335
Score = 25.8 bits (55), Expect = 4.5, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 282 LAGEEEEELKKKKEKEEEEKKKDEEGKKKEGV 313
L G+++E +KK KEK E K GK KEG+
Sbjct: 678 LEGKDKEAIKKVKEKLTE--AKGALGKAKEGL 707
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3766g031061
(103 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349034 PfEMP1 (Establishment) [Plasmodium falciparum] 22 9.0
>M.Javanica_Scaff3766g031061 on XP_001349034 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 22.3 bits (46), Expect = 9.0, Method: Composition-based stats.
Identities = 8/39 (20%), Positives = 20/39 (51%)
Query: 65 QEDVISRKKRQWILKANSKREAIHGDQADSFHVLDKTFN 103
+E+++ + K++W N+ + IH + ++ FN
Sbjct: 2065 KEELLDKLKKEWEQDYNNNSDDIHTSDNNIVSTVNHVFN 2103
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4071g032717
(311 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350582 PTRAMP (Adhesin) [Plasmodium falciparum] 30 0.21
XP_001350798 PfEMP1 (Establishment) [Plasmodium falciparum] 28 0.68
XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum] 28 1.1
AAQ11891 TRAP (Invasion) [Plasmodium falciparum] 27 1.7
AAA29770 TRAP (Invasion) [Plasmodium falciparum] 27 1.9
AAA29777 TRAP (Invasion) [Plasmodium falciparum] 27 1.9
AAW78167 TRAP (Invasion) [Plasmodium falciparum] 27 2.4
AAW78156 TRAP (Invasion) [Plasmodium falciparum] 26 2.5
AAW78174 TRAP (Invasion) [Plasmodium falciparum] 26 2.5
AAW78146 TRAP (Invasion) [Plasmodium falciparum] 26 2.6
AAW78147 TRAP (Invasion) [Plasmodium falciparum] 26 2.7
AAW78165 TRAP (Invasion) [Plasmodium falciparum] 26 2.8
AAA29776 TRAP (Invasion) [Plasmodium falciparum] 26 2.8
AAQ11894 TRAP (Invasion) [Plasmodium falciparum] 26 2.9
AAA29774 TRAP (Invasion) [Plasmodium falciparum] 26 2.9
AAW78158 TRAP (Invasion) [Plasmodium falciparum] 26 2.9
AAW78161 TRAP (Invasion) [Plasmodium falciparum] 26 2.9
AAW78141 TRAP (Invasion) [Plasmodium falciparum] 26 3.0
AAQ11895 TRAP (Invasion) [Plasmodium falciparum] 26 3.1
AAW78133 TRAP (Invasion) [Plasmodium falciparum] 26 4.0
AAW78130 TRAP (Invasion) [Plasmodium falciparum] 25 4.3
AAW78164 TRAP (Invasion) [Plasmodium falciparum] 25 4.6
AAA29771 TRAP (Invasion) [Plasmodium falciparum] 25 4.7
AAW78131 TRAP (Invasion) [Plasmodium falciparum] 25 4.9
AAW78171 TRAP (Invasion) [Plasmodium falciparum] 25 4.9
AAA29775 TRAP (Invasion) [Plasmodium falciparum] 25 5.0
AAW78157 TRAP (Invasion) [Plasmodium falciparum] 25 5.0
AAW78172 TRAP (Invasion) [Plasmodium falciparum] 25 5.2
AAQ11892 TRAP (Invasion) [Plasmodium falciparum] 25 5.5
AAA29773 TRAP (Invasion) [Plasmodium falciparum] 25 6.5
AAW78137 TRAP (Invasion) [Plasmodium falciparum] 25 8.0
AAW78139 TRAP (Invasion) [Plasmodium falciparum] 25 9.0
AAW78148 TRAP (Invasion) [Plasmodium falciparum] 25 9.1
AAW78168 TRAP (Invasion) [Plasmodium falciparum] 25 9.8
>M.Javanica_Scaff4071g032717 on XP_001350582 PTRAMP (Adhesin) [Plasmodium falciparum]
Length = 352
Score = 29.6 bits (65), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 18/108 (16%)
Query: 134 QTDKLFYRPNERNSTHRKIYLKISNVSIKIDGHSPFSTVL---AGAPDINLINIQTDKLF 190
+T +L+ E N ++ + + ++ + I +SP+ L + N+ N +
Sbjct: 100 KTLELYLSKEENNKSYLMLTFYLGDLKLMIGHNSPYEISLILNVATVNKNMSNCK----- 154
Query: 191 YRPNERINIRALPLT-----SDRQIYRGPIQFQLLDPNG-FRIFNKTN 232
N NI L T SD +I GPIQF L +G FRI N TN
Sbjct: 155 ---NNSYNIVLLKTTDVFNTSDLEILEGPIQFSLGKSSGAFRI-NVTN 198
>M.Javanica_Scaff4071g032717 on XP_001350798 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2359
Score = 28.5 bits (62), Expect = 0.68, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 228 FNKTNNGNLHYDNDDSLELEEN--DEVNSL-SDNNENKSQTSGFLREYFDLPKFLRYGNW 284
FN NGN Y D ++ E+N D ++ L SD+N+NKS+T E D+ + ++ W
Sbjct: 1558 FNCKKNGN-GYITSDHIKNEDNFTDTIDMLVSDDNKNKSETVLEACEGADIFEGIKENKW 1616
Query: 285 K 285
K
Sbjct: 1617 K 1617
>M.Javanica_Scaff4071g032717 on XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2994
Score = 27.7 bits (60), Expect = 1.1, Method: Composition-based stats.
Identities = 12/47 (25%), Positives = 25/47 (53%)
Query: 246 LEENDEVNSLSDNNENKSQTSGFLREYFDLPKFLRYGNWKVVAFAGD 292
++END++ DN +NK + +G + E F F +++ + F +
Sbjct: 1326 IDENDQIPKDPDNPQNKIRKNGEIHEEFKSQMFYTLADYRDILFGNN 1372
>M.Javanica_Scaff4071g032717 on AAQ11891 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 26.9 bits (58), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 14/76 (18%)
Query: 206 SDRQIYRGPIQFQLLDPNGFRIFN---KTNNGNLHYDNDDSLELEENDEVNSLSDNNENK 262
SDR I P+ ++LD N + + + NNGN H N E+ E NNEN+
Sbjct: 409 SDRYIPYSPLPSKVLD-NERKQSDPQSQDNNGNRHVPN------SEDRETRPHGRNNENR 461
Query: 263 SQTSGFLREYFDLPKF 278
S + R+Y D PK+
Sbjct: 462 S----YNRKYNDTPKY 473
>M.Javanica_Scaff4071g032717 on AAA29770 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 26.6 bits (57), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 14/76 (18%)
Query: 206 SDRQIYRGPIQFQLLDPNGFRIFN---KTNNGNLHYDNDDSLELEENDEVNSLSDNNENK 262
SDR I P+ ++LD N + + + NNGN H N E+ E NNEN+
Sbjct: 409 SDRYIPYSPLPPKVLD-NERKQSDPQSQDNNGNRHVPN------SEDRETRPHGRNNENR 461
Query: 263 SQTSGFLREYFDLPKF 278
S + R+Y D PK+
Sbjct: 462 S----YNRKYNDTPKY 473
>M.Javanica_Scaff4071g032717 on AAA29777 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 26.6 bits (57), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 14/76 (18%)
Query: 206 SDRQIYRGPIQFQLLDPNGFRIFN---KTNNGNLHYDNDDSLELEENDEVNSLSDNNENK 262
SDR I P+ ++LD N + + + NNGN H N E+ E NNEN+
Sbjct: 409 SDRYIPYSPLPPKVLD-NERKQSDPQSQDNNGNRHVPN------SEDRETRPHGRNNENR 461
Query: 263 SQTSGFLREYFDLPKF 278
S + R+Y D PK+
Sbjct: 462 S----YNRKYNDTPKY 473
>M.Javanica_Scaff4071g032717 on AAW78167 TRAP (Invasion) [Plasmodium falciparum]
Length = 575
Score = 26.6 bits (57), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 14/75 (18%)
Query: 206 SDRQIYRGPIQFQLLDPNGFRIFN---KTNNGNLHYDNDDSLELEENDEVNSLSDNNENK 262
SDR I P+ ++LD N + + + NNGN H N E+ E NNEN+
Sbjct: 445 SDRNIPYSPLPPKVLD-NERKQSDPQSQDNNGNRHVPN------SEDRETRPHGRNNENR 497
Query: 263 SQTSGFLREYFDLPK 277
S + R+Y D PK
Sbjct: 498 S----YNRKYNDTPK 508
>M.Javanica_Scaff4071g032717 on AAW78156 TRAP (Invasion) [Plasmodium falciparum]
Length = 581
Score = 26.2 bits (56), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 14/75 (18%)
Query: 206 SDRQIYRGPIQFQLLDPNGFRIFN---KTNNGNLHYDNDDSLELEENDEVNSLSDNNENK 262
SDR I P+ ++LD N + + + NNGN H N E+ E NNEN+
Sbjct: 451 SDRNIPYSPLPPKVLD-NERKQSDPQSQDNNGNRHVPN------SEDRETRPHGRNNENR 503
Query: 263 SQTSGFLREYFDLPK 277
S + R+Y D PK
Sbjct: 504 S----YNRKYNDTPK 514
>M.Javanica_Scaff4071g032717 on AAW78174 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 26.2 bits (56), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 14/75 (18%)
Query: 206 SDRQIYRGPIQFQLLDPNGFRIFN---KTNNGNLHYDNDDSLELEENDEVNSLSDNNENK 262
SDR I P+ ++LD N + + + NNGN H N E+ E NNEN+
Sbjct: 409 SDRNIPYSPLPPKVLD-NERKQSDPQSQDNNGNRHVPN------SEDRETRPHGRNNENR 461
Query: 263 SQTSGFLREYFDLPK 277
S + R+Y D PK
Sbjct: 462 S----YNRKYNDTPK 472
>M.Javanica_Scaff4071g032717 on AAW78146 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 26.2 bits (56), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 14/75 (18%)
Query: 206 SDRQIYRGPIQFQLLDPNGFRIFN---KTNNGNLHYDNDDSLELEENDEVNSLSDNNENK 262
SDR I P+ ++LD N + + + NNGN H N E+ E NNEN+
Sbjct: 409 SDRNIPYSPLPPKVLD-NERKQSDPQSQDNNGNRHVPN------SEDRETRPHGRNNENR 461
Query: 263 SQTSGFLREYFDLPK 277
S + R+Y D PK
Sbjct: 462 S----YNRKYNDTPK 472
>M.Javanica_Scaff4071g032717 on AAW78147 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 26.2 bits (56), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 14/75 (18%)
Query: 206 SDRQIYRGPIQFQLLDPNGFRIFN---KTNNGNLHYDNDDSLELEENDEVNSLSDNNENK 262
SDR I P+ ++LD N + + + NNGN H N E+ E NNEN+
Sbjct: 409 SDRNIPYSPLPPKVLD-NERKQSDPQSQDNNGNRHVPN------SEDRETRPHGRNNENR 461
Query: 263 SQTSGFLREYFDLPK 277
S + R+Y D PK
Sbjct: 462 S----YNRKYNDTPK 472
>M.Javanica_Scaff4071g032717 on AAW78165 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 26.2 bits (56), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 14/75 (18%)
Query: 206 SDRQIYRGPIQFQLLDPNGFRIFN---KTNNGNLHYDNDDSLELEENDEVNSLSDNNENK 262
SDR I P+ ++LD N + + + NNGN H N E+ E NNEN+
Sbjct: 409 SDRNIPYSPLPPKVLD-NERKQSDPQSQDNNGNRHVPN------SEDRETRPHGRNNENR 461
Query: 263 SQTSGFLREYFDLPK 277
S + R+Y D PK
Sbjct: 462 S----YNRKYNDTPK 472
>M.Javanica_Scaff4071g032717 on AAA29776 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 26.2 bits (56), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 14/75 (18%)
Query: 206 SDRQIYRGPIQFQLLDPNGFRIFN---KTNNGNLHYDNDDSLELEENDEVNSLSDNNENK 262
SDR I P+ ++LD N + + + NNGN H N E+ E NNEN+
Sbjct: 409 SDRSIPYSPLPPKVLD-NERKQSDPQSQDNNGNRHVPN------SEDRETRPHGRNNENR 461
Query: 263 SQTSGFLREYFDLPK 277
S + R+Y D PK
Sbjct: 462 S----YNRKYNDTPK 472
>M.Javanica_Scaff4071g032717 on AAQ11894 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 26.2 bits (56), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 14/75 (18%)
Query: 206 SDRQIYRGPIQFQLLDPNGFRIFN---KTNNGNLHYDNDDSLELEENDEVNSLSDNNENK 262
SDR I P+ ++LD N + + + NNGN H N E+ E NNEN+
Sbjct: 409 SDRSIPYSPLPPKVLD-NERKQSDPQSQDNNGNRHVPN------SEDRETRPHGRNNENR 461
Query: 263 SQTSGFLREYFDLPK 277
S + R+Y D PK
Sbjct: 462 S----YNRKYNDTPK 472
>M.Javanica_Scaff4071g032717 on AAA29774 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 26.2 bits (56), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 14/75 (18%)
Query: 206 SDRQIYRGPIQFQLLDPNGFRIFN---KTNNGNLHYDNDDSLELEENDEVNSLSDNNENK 262
SDR I P+ ++LD N + + + NNGN H N E+ E NNEN+
Sbjct: 409 SDRSIPYSPLPPKVLD-NERKQSDPQSQDNNGNRHVPN------SEDRETRPHGRNNENR 461
Query: 263 SQTSGFLREYFDLPK 277
S + R+Y D PK
Sbjct: 462 S----YNRKYNDTPK 472
>M.Javanica_Scaff4071g032717 on AAW78158 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 26.2 bits (56), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 14/75 (18%)
Query: 206 SDRQIYRGPIQFQLLDPNGFRIFN---KTNNGNLHYDNDDSLELEENDEVNSLSDNNENK 262
SDR I P+ ++LD N + + + NNGN H N E+ E NNEN+
Sbjct: 412 SDRNIPYSPLPPKVLD-NERKQSDPQSQDNNGNRHVPN------SEDRETRPHGRNNENR 464
Query: 263 SQTSGFLREYFDLPK 277
S + R+Y D PK
Sbjct: 465 S----YNRKYNDTPK 475
>M.Javanica_Scaff4071g032717 on AAW78161 TRAP (Invasion) [Plasmodium falciparum]
Length = 554
Score = 26.2 bits (56), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 14/75 (18%)
Query: 206 SDRQIYRGPIQFQLLDPNGFRIFN---KTNNGNLHYDNDDSLELEENDEVNSLSDNNENK 262
SDR I P+ ++LD N + + + NNGN H N E+ E NNEN+
Sbjct: 424 SDRNIPYSPLPPKVLD-NERKQSDPQSQDNNGNRHVPN------SEDRETRPHGRNNENR 476
Query: 263 SQTSGFLREYFDLPK 277
S + R+Y D PK
Sbjct: 477 S----YNRKYNDTPK 487
>M.Javanica_Scaff4071g032717 on AAW78141 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 26.2 bits (56), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 14/75 (18%)
Query: 206 SDRQIYRGPIQFQLLDPNGFRIFN---KTNNGNLHYDNDDSLELEENDEVNSLSDNNENK 262
SDR I P+ ++LD N + + + NNGN H N E+ E NNEN+
Sbjct: 415 SDRNIPYSPLPPKVLD-NERKQSDPQSQDNNGNRHVPN------SEDRETRPHGRNNENR 467
Query: 263 SQTSGFLREYFDLPK 277
S + R+Y D PK
Sbjct: 468 S----YNRKYNDTPK 478
>M.Javanica_Scaff4071g032717 on AAQ11895 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 26.2 bits (56), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 14/75 (18%)
Query: 206 SDRQIYRGPIQFQLLDPNGFRIFN---KTNNGNLHYDNDDSLELEENDEVNSLSDNNENK 262
SDR I P+ ++LD N + + + NNGN H N E+ E NNEN+
Sbjct: 409 SDRSIPYSPLPPKVLD-NERKQSDPQSQDNNGNRHVPN------SEDRETRPHGRNNENR 461
Query: 263 SQTSGFLREYFDLPK 277
S + R+Y D PK
Sbjct: 462 S----YNRKYNDTPK 472
>M.Javanica_Scaff4071g032717 on AAW78133 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 25.8 bits (55), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 14/76 (18%)
Query: 206 SDRQIYRGPIQFQLLDPNGFRIFN---KTNNGNLHYDNDDSLELEENDEVNSLSDNNENK 262
SDR I P+ ++LD N + + + NNGN H N E+ E + NNEN+
Sbjct: 409 SDRYIPYSPLSPKVLD-NERKQSDPQSQDNNGNRHVPN------SEDRETHPHGRNNENR 461
Query: 263 SQTSGFLREYFDLPKF 278
S + R++ D PK+
Sbjct: 462 S----YNRKHNDTPKY 473
>M.Javanica_Scaff4071g032717 on AAW78130 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 25.4 bits (54), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 14/75 (18%)
Query: 206 SDRQIYRGPIQFQLLDPNGFRIFN---KTNNGNLHYDNDDSLELEENDEVNSLSDNNENK 262
SDR I P+ ++LD N + + + NNGN H N E+ E NNEN+
Sbjct: 409 SDRYIPYSPLPPKVLD-NERKQSDPQSQDNNGNRHVPN------SEDRETRPHGRNNENR 461
Query: 263 SQTSGFLREYFDLPK 277
S + R+Y D PK
Sbjct: 462 S----YNRKYNDTPK 472
>M.Javanica_Scaff4071g032717 on AAW78164 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 25.4 bits (54), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 14/75 (18%)
Query: 206 SDRQIYRGPIQFQLLDPNGFRIFN---KTNNGNLHYDNDDSLELEENDEVNSLSDNNENK 262
SDR I P+ ++LD N + + + NNGN H N E+ E NNEN+
Sbjct: 409 SDRYIPYSPLPPKVLD-NERKQSDPQSQDNNGNRHVPN------SEDRETRPHGRNNENR 461
Query: 263 SQTSGFLREYFDLPK 277
S + R+Y D PK
Sbjct: 462 S----YNRKYNDTPK 472
>M.Javanica_Scaff4071g032717 on AAA29771 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 25.4 bits (54), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 14/75 (18%)
Query: 206 SDRQIYRGPIQFQLLDPNGFRIFN---KTNNGNLHYDNDDSLELEENDEVNSLSDNNENK 262
SDR I P+ ++LD N + + + NNGN H N E+ E NNEN+
Sbjct: 409 SDRYIPYSPLPPKVLD-NERKQSDPQSQDNNGNRHVPN------SEDRETRPHGRNNENR 461
Query: 263 SQTSGFLREYFDLPK 277
S + R+Y D PK
Sbjct: 462 S----YNRKYNDTPK 472
>M.Javanica_Scaff4071g032717 on AAW78131 TRAP (Invasion) [Plasmodium falciparum]
Length = 557
Score = 25.4 bits (54), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 14/76 (18%)
Query: 206 SDRQIYRGPIQFQLLDPNGFRIFN---KTNNGNLHYDNDDSLELEENDEVNSLSDNNENK 262
SDR I P+ ++LD N + + + NNGN H N E+ E + NNEN+
Sbjct: 427 SDRYIPYSPLPPKVLD-NERKQSDPQSQDNNGNRHVPN------SEDRETHPHGRNNENR 479
Query: 263 SQTSGFLREYFDLPKF 278
S + R++ D PK+
Sbjct: 480 S----YNRKHNDTPKY 491
>M.Javanica_Scaff4071g032717 on AAW78171 TRAP (Invasion) [Plasmodium falciparum]
Length = 551
Score = 25.4 bits (54), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 14/76 (18%)
Query: 206 SDRQIYRGPIQFQLLDPNGFRIFN---KTNNGNLHYDNDDSLELEENDEVNSLSDNNENK 262
SDR I P+ ++LD N + + + NNGN H N E+ E + NNEN+
Sbjct: 421 SDRYIPYSPLPPKVLD-NERKQSDPQSQDNNGNRHVPN------SEDRETHPHGRNNENR 473
Query: 263 SQTSGFLREYFDLPKF 278
S + R++ D PK+
Sbjct: 474 S----YNRKHNDTPKY 485
>M.Javanica_Scaff4071g032717 on AAA29775 TRAP (Invasion) [Plasmodium falciparum]
Length = 574
Score = 25.4 bits (54), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 14/75 (18%)
Query: 206 SDRQIYRGPIQFQLLDPNGFRIFN---KTNNGNLHYDNDDSLELEENDEVNSLSDNNENK 262
SDR I P+ ++LD N + + + NNGN H N E+ E NNEN+
Sbjct: 424 SDRYIPYSPLAPKVLD-NERKQSDPQSQDNNGNRHVPN------SEDRETRPHGRNNENR 476
Query: 263 SQTSGFLREYFDLPK 277
S + R+Y D PK
Sbjct: 477 S----YNRKYNDTPK 487
>M.Javanica_Scaff4071g032717 on AAW78157 TRAP (Invasion) [Plasmodium falciparum]
Length = 557
Score = 25.4 bits (54), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 14/75 (18%)
Query: 206 SDRQIYRGPIQFQLLDPNGFRIFN---KTNNGNLHYDNDDSLELEENDEVNSLSDNNENK 262
SDR I P+ ++LD N + + + NNGN H N E+ E NNEN+
Sbjct: 427 SDRYIPYSPLPPKVLD-NERKQSDPQSQDNNGNRHVPN------SEDRETRPHGRNNENR 479
Query: 263 SQTSGFLREYFDLPK 277
S + R+Y D PK
Sbjct: 480 S----YNRKYNDTPK 490
>M.Javanica_Scaff4071g032717 on AAW78172 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 25.4 bits (54), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 14/76 (18%)
Query: 206 SDRQIYRGPIQFQLLDPNGFRIFN---KTNNGNLHYDNDDSLELEENDEVNSLSDNNENK 262
SDR I P+ ++LD N + + + NNGN H N E+ E + NNEN+
Sbjct: 415 SDRYIPYSPLPPKVLD-NERKQSDPQSQDNNGNRHVPN------SEDRETHPHGRNNENR 467
Query: 263 SQTSGFLREYFDLPKF 278
S + R++ D PK+
Sbjct: 468 S----YNRKHNDTPKY 479
>M.Javanica_Scaff4071g032717 on AAQ11892 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 25.4 bits (54), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 14/76 (18%)
Query: 206 SDRQIYRGPIQFQLLDPNGFRIFN---KTNNGNLHYDNDDSLELEENDEVNSLSDNNENK 262
SDR I P+ ++LD N + + + NNGN H N E+ E + NNEN+
Sbjct: 409 SDRYIPYSPLPPKVLD-NERKQSDPQSQDNNGNRHVPN------SEDRETHPHGRNNENR 461
Query: 263 SQTSGFLREYFDLPKF 278
S + R++ D PK+
Sbjct: 462 S----YNRKHNDTPKY 473
>M.Javanica_Scaff4071g032717 on AAA29773 TRAP (Invasion) [Plasmodium falciparum]
Length = 568
Score = 25.0 bits (53), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 14/76 (18%)
Query: 206 SDRQIYRGPIQFQLLDPNGFRIFN---KTNNGNLHYDNDDSLELEENDEVNSLSDNNENK 262
SDR I P+ ++LD N + + + NNGN H N E+ E + NNEN+
Sbjct: 418 SDRYIPYSPLPPKVLD-NERKQSDPQSQDNNGNRHVPN------SEDRETHPHGRNNENR 470
Query: 263 SQTSGFLREYFDLPKF 278
S + R++ D PK+
Sbjct: 471 S----YNRKHNDTPKY 482
>M.Javanica_Scaff4071g032717 on AAW78137 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 24.6 bits (52), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 14/75 (18%)
Query: 206 SDRQIYRGPIQFQLLDPNGFRIFN---KTNNGNLHYDNDDSLELEENDEVNSLSDNNENK 262
SDR I P+ +LD N + + + NNGN H N E+ E NNEN+
Sbjct: 415 SDRYIPYSPLPPNVLD-NERKQSDPQSQDNNGNRHVPN------SEDRETRPHGRNNENR 467
Query: 263 SQTSGFLREYFDLPK 277
S + R+Y D PK
Sbjct: 468 S----YNRKYNDTPK 478
>M.Javanica_Scaff4071g032717 on AAW78139 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 24.6 bits (52), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 14/75 (18%)
Query: 206 SDRQIYRGPIQFQLLDPNGFRIFN---KTNNGNLHYDNDDSLELEENDEVNSLSDNNENK 262
SDR I P+ +LD N + + + NNGN H N E+ E NNEN+
Sbjct: 415 SDRYIPYSPLPPNVLD-NERKQSDPQSQDNNGNRHVPN------SEDRETRPHGRNNENR 467
Query: 263 SQTSGFLREYFDLPK 277
S + R+Y D PK
Sbjct: 468 S----YNRKYNDTPK 478
>M.Javanica_Scaff4071g032717 on AAW78148 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 24.6 bits (52), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 14/75 (18%)
Query: 206 SDRQIYRGPIQFQLLDPNGFRIFN---KTNNGNLHYDNDDSLELEENDEVNSLSDNNENK 262
SDR I P+ ++LD N + + + NNGN H N E+ E NNEN+
Sbjct: 409 SDRNIPYSPLPPKVLD-NERKQSDPQSQDNNGNRHVPN------SEDRETRPHGRNNENR 461
Query: 263 SQTSGFLREYFDLPK 277
S + R++ D PK
Sbjct: 462 S----YNRKHNDTPK 472
>M.Javanica_Scaff4071g032717 on AAW78168 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 24.6 bits (52), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 14/75 (18%)
Query: 206 SDRQIYRGPIQFQLLDPNGFRIFN---KTNNGNLHYDNDDSLELEENDEVNSLSDNNENK 262
SDR I P+ ++LD N + + + NNGN H N E+ E NNEN+
Sbjct: 409 SDRNIPYSPLPPKVLD-NERKQSDPQSQDNNGNRHVPN------SEDRETRPHGRNNENR 461
Query: 263 SQTSGFLREYFDLPK 277
S + R++ D PK
Sbjct: 462 S----YNRKHNDTPK 472
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff278g004326
(315 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001347690 PfEMP1 (Establishment) [Plasmodium falciparum] 27 1.3
XP_001609041 variant erythrocyte surface antigen-1, alpha subun... 25 4.9
XP_001351514 PfEMP1 (Establishment) [Plasmodium falciparum] 25 5.3
XP_001351513 PfEMP1 (Establishment) [Plasmodium falciparum] 25 5.8
XP_001349533 PfEMP3 (Establishment) [Plasmodium falciparum] 25 6.0
AAA29462 ABRA (Others) [Plasmodium falciparum] 25 6.6
XP_652394 Igl2 (Adhesin) [Entamoeba histolytica] 25 7.0
>M.Javanica_Scaff278g004326 on XP_001347690 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 27.3 bits (59), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 10/35 (28%), Positives = 20/35 (57%)
Query: 1 MKLISILIFLIFNSILWSLINSVKNNKNQNELIRV 35
+K+I I++++ LW + K K+ +L+RV
Sbjct: 1782 LKVIYIVVYMYIYIYLWMYMYVWKKTKSTIDLLRV 1816
>M.Javanica_Scaff278g004326 on XP_001609041 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1318
Score = 25.4 bits (54), Expect = 4.9, Method: Composition-based stats.
Identities = 9/18 (50%), Positives = 14/18 (77%)
Query: 56 PQKHDRDYYYKNREKILE 73
P +HDR+Y +N +KIL+
Sbjct: 645 PMEHDRNYRVENMKKILD 662
>M.Javanica_Scaff278g004326 on XP_001351514 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2201
Score = 25.4 bits (54), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 154 QSQKYEETLKTTSKIANKNNEGEKKYKIEIVQNINS 189
Q QKY+E +K +K+A+ ++ G K N+N
Sbjct: 402 QKQKYDEEIKKYTKVASSSSGGRAKRAARGGSNVNG 437
>M.Javanica_Scaff278g004326 on XP_001351513 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2152
Score = 25.4 bits (54), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 154 QSQKYEETLKTTSKIANKNNEGEKKYKIEIVQNINS 189
Q QKY+E +K +K+A+ ++ G K N+N
Sbjct: 402 QKQKYDEEIKKYTKVASSSSGGRAKRAARGGSNVNG 437
>M.Javanica_Scaff278g004326 on XP_001349533 PfEMP3 (Establishment) [Plasmodium falciparum]
Length = 2441
Score = 25.4 bits (54), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 3 LISILIFLIFNSILWSLINS 22
LI +L +F+ ++W LI S
Sbjct: 16 LIFLLKIFLFSPLIWILIYS 35
>M.Javanica_Scaff278g004326 on AAA29462 ABRA (Others) [Plasmodium falciparum]
Length = 743
Score = 25.0 bits (53), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 3 LISILIFLIFNSILWSLINSVKNNKNQNELIRVEETSKDLIKIL 46
L S+L+F+I W++I+ KN+KNQ + V ++L K +
Sbjct: 8 LFSLLLFVI----RWNIISCNKNDKNQGVDMNVLNNYENLFKFV 47
>M.Javanica_Scaff278g004326 on XP_652394 Igl2 (Adhesin) [Entamoeba histolytica]
Length = 1105
Score = 25.0 bits (53), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Query: 230 VNDNAEKGEDTPIQTSHNVEMN-ENAEGTLCVNPQTDDCVNNLSGQPNNQSLDSLHIQQM 288
+ND + T Q + +E + + +LC +P T+ C+ + + P +L S H+
Sbjct: 318 LNDGFKTSAKTECQKGYYLEKDGDKKRCSLCPDPFTE-CLTSQTPVPGKLNLRSAHLTST 376
Query: 289 DDHDDLIDLSLLDDSDFLDY 308
D L L D D + Y
Sbjct: 377 DGPCKLPGCLLCSDDDTICY 396
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2700g024675
(111 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_816570 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.1
>M.Javanica_Scaff2700g024675 on XP_816570 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 718
Score = 23.1 bits (48), Expect = 5.1, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 23 TPGNGMTSSTPIPSGIVLDPSGCSHLMVTCMA 54
TP G STP+ + DP+G + + ++C A
Sbjct: 565 TPA-GSIKSTPLVGASLEDPAGTNFIGLSCTA 595
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff320g004847
(238 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum] 26 3.0
XP_001351876 PfEMP1 (Establishment) [Plasmodium falciparum] 25 7.5
XP_818689 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 8.7
>M.Javanica_Scaff320g004847 on XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2980
Score = 25.8 bits (55), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 158 QYCDKKCTRLNTLENHRRSHMGERKIYQ----C-AHCDKTF-KSKNGKVGHEKSKHSSDA 211
++ D+K T N + + R+H R ++ C +K F S++G+ + + K S +
Sbjct: 62 RFKDQKNTTTNPCQLNYRNHSNVRSSFENDNPCYGREEKRFSDSRSGQCTYNRIKDSKEG 121
Query: 212 DHKVDKCSPRVMLH 225
D+KV C+P LH
Sbjct: 122 DNKVGACAPYRRLH 135
>M.Javanica_Scaff320g004847 on XP_001351876 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3164
Score = 24.6 bits (52), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 15/68 (22%), Positives = 26/68 (38%), Gaps = 6/68 (8%)
Query: 85 CGHVFDNEENFMEHVKAHAKMEKGTHPYCRW------SSCNGKKFLRQNFSQHIRMHTGE 138
CG++ N+ + + E GT + RW +C KK +R + R +
Sbjct: 3053 CGYISKNKNENINPKWCNVPTEDGTDQFLRWLIEWAMQACKEKKRVRDSLKTKCRCSNKD 3112
Query: 139 KLYVCEVL 146
E+L
Sbjct: 3113 NFKASELL 3120
>M.Javanica_Scaff320g004847 on XP_818689 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 844
Score = 24.3 bits (51), Expect = 8.7, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 35 SGANVDHHENSSNYYEQPNQGSANYSEGDSSSVPALTLVSPT 76
SG N D E+ + E P AN + + AL P+
Sbjct: 731 SGENADVEEDGDSPSEDPESAEANSPSVEGEHIVALPATKPS 772
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]