BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4456g034691
(118 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_807433 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 8.3
>M.Javanica_Scaff4456g034691 on XP_807433 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1042
Score = 22.7 bits (47), Expect = 8.3, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 47 LGGENLTNNIQVLVSNTNTSLTEEDVEDDE 76
+GG+N +N+ + V+ +N L ++DDE
Sbjct: 700 IGGDNKSNSGNIHVTVSNVLLYNRLLQDDE 729
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff26409g092306
(135 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_844692 VSG (Establishment) [Trypanosoma brucei] 29 0.099
XP_966160 PfEMP1 (Establishment) [Plasmodium falciparum] 23 6.6
>M.Javanica_Scaff26409g092306 on XP_844692 VSG (Establishment) [Trypanosoma brucei]
Length = 482
Score = 28.9 bits (63), Expect = 0.099, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 13 EPNHIAENASKVSKDQVEDHDCKANIFSTCSRSRPVTDSNGMKKASFECKDSS 65
E I NA+ SK ++ D DCKA C NG KK + K+++
Sbjct: 394 EGEKIKRNAA-TSKAKLSDDDCKAKTGGACKDGCKEISENGQKKCVVDKKEAT 445
>M.Javanica_Scaff26409g092306 on XP_966160 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2394
Score = 23.5 bits (49), Expect = 6.6, Method: Composition-based stats.
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 60 ECKDSSNTGRRSLNP 74
+CK+ +G RSLNP
Sbjct: 707 KCKEQEESGGRSLNP 721
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2657g024381
(73 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350797 PfEMP1 (Establishment) [Plasmodium falciparum] 27 0.062
XP_001349035 PfEMP1 (Establishment) [Plasmodium falciparum] 27 0.11
XP_001349030 PfEMP1 (Establishment) [Plasmodium falciparum] 25 0.65
XP_001351438 PfEMP1 (Establishment) [Plasmodium falciparum] 24 1.1
XP_001351439 PfEMP1 (Establishment) [Plasmodium falciparum] 24 1.3
>M.Javanica_Scaff2657g024381 on XP_001350797 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2287
Score = 27.3 bits (59), Expect = 0.062, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 19 PQGLQEHFVNPANQHGGELQLFPTNVEHQENNQNEEYFQGNYPYEDV 65
P + ++FV+ NQ+ ++ PT ++ + N+ N E + YP D+
Sbjct: 2239 PADINKNFVDKNNQNQHPIEK-PTKIQIEMNSNNREVVEQQYPIADI 2284
>M.Javanica_Scaff2657g024381 on XP_001349035 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2239
Score = 26.6 bits (57), Expect = 0.11, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 19 PQGLQEHFVNPANQHGGELQLFPTNVEHQENNQNEEYFQGNYPYEDV 65
P + ++FV+ NQ+ ++ PT ++ + N+ N E + YP D+
Sbjct: 2191 PADINKNFVHKNNQNQHPIEK-PTKIQIEMNSNNREVVEQQYPIADI 2236
>M.Javanica_Scaff2657g024381 on XP_001349030 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 24.6 bits (52), Expect = 0.65, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Query: 27 VNPANQHGGELQLFPTNVEHQENNQNEEYFQGNYPYEDV 65
+N NQH E PT ++ + N+ N E + YP D+
Sbjct: 2177 INNHNQHPIEK---PTKIQIEMNSNNREVVEQQYPIADI 2212
>M.Javanica_Scaff2657g024381 on XP_001351438 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2312
Score = 23.9 bits (50), Expect = 1.1, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Query: 27 VNPANQHGGELQLFPTNVEHQENNQNEEYFQGNYPYEDV 65
+N NQH E PT ++ + N+ N E + YP D+
Sbjct: 2274 INNHNQHPIEK---PTKIQIEMNSNNREVDEQQYPIADI 2309
>M.Javanica_Scaff2657g024381 on XP_001351439 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2326
Score = 23.9 bits (50), Expect = 1.3, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Query: 27 VNPANQHGGELQLFPTNVEHQENNQNEEYFQGNYPYEDV 65
+N NQH E PT ++ + N+ N E + YP D+
Sbjct: 2288 INNHNQHPIEK---PTKIQIEMNSNNREVDEQQYPIADI 2323
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff580g007810
(70 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum] 24 1.1
XP_652394 Igl2 (Adhesin) [Entamoeba histolytica] 23 2.6
XP_654447 Igl1 (Adhesin) [Entamoeba histolytica] 23 2.9
XP_829766 VSG (Establishment) [Trypanosoma brucei] 22 4.6
XP_001349514 PfEMP1 (Establishment) [Plasmodium falciparum] 22 5.5
XP_001609167 variant erythrocyte surface antigen-1, alpha subun... 22 6.6
XP_001608670 variant erythrocyte surface antigen-1, alpha subun... 22 7.1
XP_001609315 variant erythrocyte surface antigen-1, alpha subun... 21 8.0
XP_001609618 variant erythrocyte surface antigen-1, alpha subun... 21 8.3
>M.Javanica_Scaff580g007810 on XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3119
Score = 23.9 bits (50), Expect = 1.1, Method: Composition-based stats.
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 15 VSLSMGDHCTDIIKLDCEKYCHDTCTKASGDEVVCNLVKSICDNI 59
++ + + CTD + Y C +GD+ C +VK+ +NI
Sbjct: 519 ITKRLSEFCTDSSNNKGKNYEQWKCYYKNGDDNKCKMVKNSGNNI 563
>M.Javanica_Scaff580g007810 on XP_652394 Igl2 (Adhesin) [Entamoeba histolytica]
Length = 1105
Score = 22.7 bits (47), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 10 ILLFLVSLSMGDHCTDII 27
ILL +S+S+GD+ D +
Sbjct: 3 ILLLFISISLGDYTADKL 20
>M.Javanica_Scaff580g007810 on XP_654447 Igl1 (Adhesin) [Entamoeba histolytica]
Length = 1101
Score = 22.7 bits (47), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 10 ILLFLVSLSMGDHCTDII 27
ILL +S+S+GD+ D +
Sbjct: 3 ILLLFISISLGDYTADKL 20
>M.Javanica_Scaff580g007810 on XP_829766 VSG (Establishment) [Trypanosoma brucei]
Length = 490
Score = 21.9 bits (45), Expect = 4.6, Method: Composition-based stats.
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 53 KSICDNIGCCHHEGDTDT 70
K+ C+N G C EG+ +T
Sbjct: 391 KTECENAGKCKWEGENET 408
>M.Javanica_Scaff580g007810 on XP_001349514 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2120
Score = 21.9 bits (45), Expect = 5.5, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 22 HCTDIIKLDCEKYCHDTCTKASGDEV 47
H DII D K +D K SG E+
Sbjct: 20 HLLDIIGEDIYKIANDAALKRSGSEL 45
>M.Javanica_Scaff580g007810 on XP_001609167 variant erythrocyte surface antigen-1, alpha
subunit (Establishment) [Babesia bovis]
Length = 1317
Score = 21.6 bits (44), Expect = 6.6, Method: Composition-based stats.
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 43 SGDEVVCNLVKSICD 57
SGDE +C L ++ D
Sbjct: 39 SGDECICGLASAVTD 53
>M.Javanica_Scaff580g007810 on XP_001608670 variant erythrocyte surface antigen-1, alpha
subunit (Establishment) [Babesia bovis]
Length = 1320
Score = 21.6 bits (44), Expect = 7.1, Method: Composition-based stats.
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 43 SGDEVVCNLVKSICD 57
SGDE +C L ++ D
Sbjct: 39 SGDECICGLAAAVTD 53
>M.Javanica_Scaff580g007810 on XP_001609315 variant erythrocyte surface antigen-1, alpha
subunit (Establishment) [Babesia bovis]
Length = 1338
Score = 21.2 bits (43), Expect = 8.0, Method: Composition-based stats.
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 43 SGDEVVCNLVKSICD 57
SGDE +C L ++ D
Sbjct: 39 SGDECICGLAAAVTD 53
>M.Javanica_Scaff580g007810 on XP_001609618 variant erythrocyte surface antigen-1, alpha
subunit (Establishment) [Babesia bovis]
Length = 1325
Score = 21.2 bits (43), Expect = 8.3, Method: Composition-based stats.
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 43 SGDEVVCNLVKSICD 57
SGDE +C L ++ D
Sbjct: 39 SGDECICGLAAAVTD 53
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5806g041136
(341 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_652394 Igl2 (Adhesin) [Entamoeba histolytica] 25 9.9
XP_650534 HgI (Adhesin) [Entamoeba histolytica] 25 9.9
>M.Javanica_Scaff5806g041136 on XP_652394 Igl2 (Adhesin) [Entamoeba histolytica]
Length = 1105
Score = 24.6 bits (52), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 173 PAVCLKPPRCQCLPGYARTSDGIC 196
+V +KPP C CL G + +G C
Sbjct: 756 SSVDIKPPTCACLTGTVQLENGTC 779
>M.Javanica_Scaff5806g041136 on XP_650534 HgI (Adhesin) [Entamoeba histolytica]
Length = 1207
Score = 24.6 bits (52), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 286 CPLGSLCKFVNGEPTCVRAKDCSRI 310
C G +C + +G+P C+ +C +
Sbjct: 608 CTNGEVCDYTDGDPKCINVDNCEEL 632
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff8290g051425
(111 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_807450 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.6
XP_819733 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.1
XP_001349031 PfEMP1 (Establishment) [Plasmodium falciparum] 23 5.5
XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum] 23 7.7
XP_803061 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 8.6
XP_815514 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 9.0
XP_001351438 PfEMP1 (Establishment) [Plasmodium falciparum] 22 9.3
XP_001351439 PfEMP1 (Establishment) [Plasmodium falciparum] 22 9.7
XP_001350796 PfEMP1 (Establishment) [Plasmodium falciparum] 22 9.7
XP_001351437 PfEMP1 (Establishment) [Plasmodium falciparum] 22 9.9
>M.Javanica_Scaff8290g051425 on XP_807450 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 810
Score = 23.5 bits (49), Expect = 3.6, Method: Composition-based stats.
Identities = 10/16 (62%), Positives = 11/16 (68%)
Query: 8 YSMEENSNNNNSNSVL 23
YS +E S NNN SVL
Sbjct: 394 YSKKEKSGNNNGKSVL 409
>M.Javanica_Scaff8290g051425 on XP_819733 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 799
Score = 23.5 bits (49), Expect = 4.1, Method: Composition-based stats.
Identities = 13/27 (48%), Positives = 14/27 (51%)
Query: 2 EEDFRQYSMEENSNNNNSNSVLGEGRS 28
E + YSM S NN SN L EG S
Sbjct: 305 ESEVDAYSMIIYSTNNGSNWTLSEGIS 331
>M.Javanica_Scaff8290g051425 on XP_001349031 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2275
Score = 23.1 bits (48), Expect = 5.5, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
Query: 35 NSEESPPTI-----TDNTEKKQQKHKNRQRASLSSIHPNNL 70
N++ + P I +NT +HK Q+ + SIH NL
Sbjct: 1973 NTQNTEPNILHDNVDNNTHPTMSRHKVDQKPFIMSIHDRNL 2013
>M.Javanica_Scaff8290g051425 on XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2238
Score = 22.7 bits (47), Expect = 7.7, Method: Composition-based stats.
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 43 ITDNTEKKQQKHKNRQRASLSSIHPNNLIT 72
+ +NT +H ++ ++SIH NL T
Sbjct: 1958 VDNNTNTTMSRHNVEEKPFITSIHDRNLYT 1987
>M.Javanica_Scaff8290g051425 on XP_803061 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 657
Score = 22.3 bits (46), Expect = 8.6, Method: Composition-based stats.
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 8 YSMEENSNNNNSNSVL 23
YS +E + NNN SVL
Sbjct: 394 YSKKEKNGNNNGKSVL 409
>M.Javanica_Scaff8290g051425 on XP_815514 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 811
Score = 22.3 bits (46), Expect = 9.0, Method: Composition-based stats.
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 8 YSMEENSNNNNSNSVL 23
YS +E + NNN SVL
Sbjct: 395 YSKKEKNGNNNGKSVL 410
>M.Javanica_Scaff8290g051425 on XP_001351438 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2312
Score = 22.3 bits (46), Expect = 9.3, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 5/43 (11%)
Query: 35 NSEESPPTI-----TDNTEKKQQKHKNRQRASLSSIHPNNLIT 72
N++ + P I +NT +H Q+ + SIH NL +
Sbjct: 1979 NTQNTEPNILHDNVDNNTHPTMSRHNMDQKPFIMSIHDRNLFS 2021
>M.Javanica_Scaff8290g051425 on XP_001351439 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2326
Score = 22.3 bits (46), Expect = 9.7, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 5/43 (11%)
Query: 35 NSEESPPTI-----TDNTEKKQQKHKNRQRASLSSIHPNNLIT 72
N++ + P I +NT +H Q+ + SIH NL +
Sbjct: 1993 NTQNTEPNILHDNVDNNTHPTMSRHNMDQKPFIMSIHDRNLFS 2035
>M.Javanica_Scaff8290g051425 on XP_001350796 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2646
Score = 22.3 bits (46), Expect = 9.7, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 43 ITDNTEKKQQKHKNRQRASLSSIHPNNLIT 72
+ +NT +H Q+ ++SIH NL T
Sbjct: 2372 VDNNTHPTPSRHTLDQKPFITSIHDRNLYT 2401
>M.Javanica_Scaff8290g051425 on XP_001351437 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2277
Score = 22.3 bits (46), Expect = 9.9, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 5/43 (11%)
Query: 35 NSEESPPTI-----TDNTEKKQQKHKNRQRASLSSIHPNNLIT 72
N++ + P I +NT +H Q+ + SIH NL +
Sbjct: 1975 NTQNTEPNILHDNVDNNTHPTMSRHNMDQKPFIMSIHDRNLFS 2017
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7035g046466
(110 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2578g023883
(99 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4071g032721
(147 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_811916 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.0
XP_820183 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.9
XP_815662 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 9.2
XP_810286 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 9.5
>M.Javanica_Scaff4071g032721 on XP_811916 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 685
Score = 25.0 bits (53), Expect = 2.0, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 86 RGNIGGHTAAEGDIIGEYSSQRASRESSAVW 116
RGNI AA+G +I SS + ++W
Sbjct: 88 RGNINAQYAADGKVIKPISSDVVAEYIDSLW 118
>M.Javanica_Scaff4071g032721 on XP_820183 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 721
Score = 24.3 bits (51), Expect = 3.9, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 86 RGNIGGHTAAEGDIIGEYSSQRASRESSAVW 116
RGNI AA+G +I SS + + W
Sbjct: 125 RGNINAQYAADGKVIKPISSDVVAEYIDSSW 155
>M.Javanica_Scaff4071g032721 on XP_815662 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 963
Score = 23.1 bits (48), Expect = 9.2, Method: Composition-based stats.
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 89 IGGHTAAEGDIIGEYSSQRA 108
+GGH+AA G+ +G Q+
Sbjct: 891 VGGHSAASGEKVGGTDGQKG 910
>M.Javanica_Scaff4071g032721 on XP_810286 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 846
Score = 23.1 bits (48), Expect = 9.5, Method: Composition-based stats.
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 89 IGGHTAAEGDIIGEYSSQRA 108
+GGH+AA G+ +G Q+
Sbjct: 772 VGGHSAASGEKVGGTDGQKG 791
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6238g043061
(303 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_819381 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.3
XP_812720 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.4
XP_806299 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 3.1
XP_001350415 PfEMP1 (Establishment) [Plasmodium falciparum] 26 3.7
XP_804892 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 7.5
XP_818346 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 9.4
XP_815493 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 9.5
>M.Javanica_Scaff6238g043061 on XP_819381 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1046
Score = 27.3 bits (59), Expect = 1.3, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 201 NTSRGYNFNNKPKSSKSIWTNDYNRQ 226
+T GYN+N K +W N +NR+
Sbjct: 329 STENGYNWNGHVKPITRVWGNSHNRK 354
>M.Javanica_Scaff6238g043061 on XP_812720 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1041
Score = 27.3 bits (59), Expect = 1.4, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 201 NTSRGYNFNNKPKSSKSIWTNDYNRQ 226
+T GYN+N K +W N +NR+
Sbjct: 329 STENGYNWNGHVKPITRVWGNSHNRK 354
>M.Javanica_Scaff6238g043061 on XP_806299 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1047
Score = 26.2 bits (56), Expect = 3.1, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 201 NTSRGYNFNNKPKSSKSIWTNDYNR 225
+T GYN+N K +W N +NR
Sbjct: 328 STENGYNWNGHVKPITRVWGNTHNR 352
>M.Javanica_Scaff6238g043061 on XP_001350415 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3056
Score = 25.8 bits (55), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 21/49 (42%)
Query: 51 YKISPQFFEKENCTMLTAKNTCCSYLKNFKYILNAKNDRDLVFDEKMLY 99
Y + Q+ + T L K CC+ +F + + DLV DE Y
Sbjct: 1649 YYLWKQYHAHNDTTYLAHKKACCAIRGSFYDLEDIIKGNDLVHDEYTKY 1697
>M.Javanica_Scaff6238g043061 on XP_804892 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1046
Score = 25.0 bits (53), Expect = 7.5, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 200 TNTSRGYNFNNKPKSSKSIWTNDYNRQ 226
++TS GY +N + +W N +NR+
Sbjct: 333 SSTSDGYGWNTLGEPINRVWGNSHNRK 359
>M.Javanica_Scaff6238g043061 on XP_818346 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 927
Score = 24.6 bits (52), Expect = 9.4, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 41/110 (37%), Gaps = 12/110 (10%)
Query: 95 EKMLYRLNWPKINDILEGFELESLPSSSFTASNSVRRASSLRGSEDTEGMETPVCKKSTS 154
E + + W +I + +G L+SL + L+ D + CKK+
Sbjct: 69 ESTVSKFEWKEIKSV-DGVNLDSLGAPGL-----------LKVGSDVFAVAEAQCKKNGE 116
Query: 155 VRDLVGSFLSRSSSERRRSPSPTVTNKRSDPKFLDKNILKENNNSTNTSR 204
G + + +P +T+++ +FL++ + + SR
Sbjct: 117 SNSFTGIASQIITKDNANTPVEALTDQKDKTQFLEEGTSDDPKKKVDVSR 166
>M.Javanica_Scaff6238g043061 on XP_815493 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 706
Score = 24.6 bits (52), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 204 RGYNFNNKPKSSKSIWTNDYNRQYR 228
RGY NK ++ +W D NR +
Sbjct: 356 RGYTSGNKRATALCLWVTDNNRTFH 380
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3643g030320
(239 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_818662 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.5
XP_815514 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.6
XP_001351575 RAP2 (Invasion) [Plasmodium falciparum] 25 5.0
>M.Javanica_Scaff3643g030320 on XP_818662 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1038
Score = 25.0 bits (53), Expect = 4.5, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 24/57 (42%)
Query: 30 RRGGHGGASSSSGEGELREKQRVRAELIRDYTTRSVDDYIKHHNCAVMMGQLQQQGS 86
R H G + SSG E RE + R + R +T +V + C +Q G+
Sbjct: 12 RTHNHCGVTGSSGRREGRESEPQRPNMSRRVSTSAVLLLVVMVCCGSGAAHAEQTGA 68
>M.Javanica_Scaff3643g030320 on XP_815514 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 811
Score = 25.0 bits (53), Expect = 4.6, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 1 MSKSLNALLFLIFIQILPSNSSGGGSSSSRRGGHGGASSSSGEGELREK 49
MS+ + A L+ + ++ S+GGG++SS+ G SS + R+K
Sbjct: 39 MSRHVFASAVLLLV-VMMCCSTGGGAASSKETSSGAESSPKPYFDWRDK 86
>M.Javanica_Scaff3643g030320 on XP_001351575 RAP2 (Invasion) [Plasmodium falciparum]
Length = 398
Score = 24.6 bits (52), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 16/103 (15%)
Query: 60 YTTRSVDDYIKHHNCAVMMGQLQQQGSIDIPKQFLEFLEKSLSNRIGSKKQLKITK--NR 117
YT SV +Y++ +N + G + + DI +S++N I K L + K +
Sbjct: 207 YTEISVLNYVRDYNFLIYAGSRENYYNSDIAGP-----ARSVNNVISKNKTLGLRKRSSS 261
Query: 118 MISDGSAVNE-IKEYCEK-----YMG---DTIEEIHENCKNKM 151
+ G+ N+ I YCEK Y G D I K KM
Sbjct: 262 LALVGTNNNDPIFAYCEKDNKSEYYGTPDDLITSFFSIIKTKM 304
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff41g000931
(67 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7434g048083
(61 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_808176 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.1
XP_816852 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.2
XP_811687 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.3
XP_812043 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.7
XP_816855 Trans-sialidase (Invasion) [Trypanosoma cruzi] 21 6.1
XP_821162 Trans-sialidase (Invasion) [Trypanosoma cruzi] 21 6.2
XP_805533 Trans-sialidase (Invasion) [Trypanosoma cruzi] 21 7.5
>M.Javanica_Scaff7434g048083 on XP_808176 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 889
Score = 22.7 bits (47), Expect = 2.1, Method: Composition-based stats.
Identities = 12/25 (48%), Positives = 12/25 (48%), Gaps = 1/25 (4%)
Query: 32 SARRLTARRM-PQNPAQSAGFCTSA 55
S RR R PQ P S CTSA
Sbjct: 23 SGRRREGRESEPQRPNMSRRVCTSA 47
>M.Javanica_Scaff7434g048083 on XP_816852 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 739
Score = 21.6 bits (44), Expect = 4.2, Method: Composition-based stats.
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 43 QNPAQSAGFCTSAC 56
+ P + AGFC AC
Sbjct: 652 ETPLELAGFCFGAC 665
>M.Javanica_Scaff7434g048083 on XP_811687 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 722
Score = 21.6 bits (44), Expect = 4.3, Method: Composition-based stats.
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 43 QNPAQSAGFCTSAC 56
+ P + AGFC AC
Sbjct: 652 ETPLELAGFCFGAC 665
>M.Javanica_Scaff7434g048083 on XP_812043 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 807
Score = 21.6 bits (44), Expect = 4.7, Method: Composition-based stats.
Identities = 11/21 (52%), Positives = 12/21 (57%), Gaps = 4/21 (19%)
Query: 36 LTARRMPQNPAQSAGFCTSAC 56
LTA R P + AGFC AC
Sbjct: 664 LTAER----PLELAGFCFGAC 680
>M.Javanica_Scaff7434g048083 on XP_816855 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 754
Score = 21.2 bits (43), Expect = 6.1, Method: Composition-based stats.
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 43 QNPAQSAGFCTSAC 56
+ P + AGFC AC
Sbjct: 614 ETPLELAGFCFGAC 627
>M.Javanica_Scaff7434g048083 on XP_821162 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 787
Score = 21.2 bits (43), Expect = 6.2, Method: Composition-based stats.
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 43 QNPAQSAGFCTSAC 56
+ P + AGFC AC
Sbjct: 650 ERPLELAGFCFGAC 663
>M.Javanica_Scaff7434g048083 on XP_805533 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 794
Score = 21.2 bits (43), Expect = 7.5, Method: Composition-based stats.
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 43 QNPAQSAGFCTSAC 56
+ P + AGFC AC
Sbjct: 655 ETPLELAGFCFGAC 668
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3196g027749
(415 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
P02892 BabR (Others) [Babesia bovis] 25 6.5
P02890 BabR (Others) [Babesia bovis] 25 6.6
P02891 BabR (Others) [Babesia bovis] 25 8.5
>M.Javanica_Scaff3196g027749 on P02892 BabR (Others) [Babesia bovis]
Length = 212
Score = 25.0 bits (53), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Query: 75 GRNFNENEENLKQKKPVVYLQHGLLASSFD-----WVANLPNQSLGFILADAGYDVWMGN 129
++ E ++NLK ++ + +S FD +++ N+ L +L DA +
Sbjct: 3 AQSATETQKNLKTLMELIKTKRPFKSSDFDTLNLDYLSGQSNEELFKLLIDAINGMKENV 62
Query: 130 VRGNVYSSKHEKSFLGKDEYWKFTWDEMALID 161
+ N Y ++ L DE KF + E+ D
Sbjct: 63 AKVNEYLTEEGDHSLSGDELLKFVYKELVYDD 94
>M.Javanica_Scaff3196g027749 on P02890 BabR (Others) [Babesia bovis]
Length = 191
Score = 25.0 bits (53), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Query: 75 GRNFNENEENLKQKKPVVYLQHGLLASSFD-----WVANLPNQSLGFILADAGYDVWMGN 129
++ E ++NLK ++ + +S FD +++ N+ L +L DA +
Sbjct: 3 AQSATETQKNLKTLMELIKTKRPFKSSDFDTLNLDYLSGQSNEELFKLLIDAINGMKENV 62
Query: 130 VRGNVYSSKHEKSFLGKDEYWKFTWDEMALID 161
+ N Y ++ L DE KF + E+ D
Sbjct: 63 AKVNEYLTEEGDHSLSGDELLKFVYKELVYDD 94
>M.Javanica_Scaff3196g027749 on P02891 BabR (Others) [Babesia bovis]
Length = 183
Score = 24.6 bits (52), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Query: 75 GRNFNENEENLKQKKPVVYLQHGLLASSFD-----WVANLPNQSLGFILADAGYDVWMGN 129
++ E ++NLK ++ + +S FD +++ N+ L +L DA +
Sbjct: 3 AQSATETQKNLKTLMELIKTKRPFKSSDFDTLNLDYLSGQSNEELFKLLIDAINGMKENV 62
Query: 130 VRGNVYSSKHEKSFLGKDEYWKFTWDEMALID 161
+ N Y ++ L DE KF + E+ D
Sbjct: 63 AKVNEYLTEEGDHSLSGDELLKFVYKELVYDD 94
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6310g043366
(402 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_814930 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 8.8
XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum] 25 9.5
>M.Javanica_Scaff6310g043366 on XP_814930 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 938
Score = 25.0 bits (53), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 15/68 (22%), Positives = 28/68 (41%)
Query: 23 EDDNNDEQLGDFEIGEAFDEDIETFDNLHDVKGEDTLKDDILQDYQNLDVGKRNFNSDVT 82
E+ N G F I ++ + D+ + +N G D ++DI + F +
Sbjct: 842 EETVNQSASGTFSITDSTEGDVSSDENGETTGGADGQEEDIQPQDGEANAAALGFALKSS 901
Query: 83 LGYVTPWN 90
LG + W+
Sbjct: 902 LGTSSQWD 909
>M.Javanica_Scaff6310g043366 on XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2178
Score = 25.0 bits (53), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 5/59 (8%)
Query: 57 DTLKDDILQDYQNLDVGKRNFNSDVTLGYVTPWNNHGYDVAKWAAQKFTHISPVWFQLK 115
DT K +I++ Y+N + NSD + W H YD +K + Q + W K
Sbjct: 534 DTTKSNIVEKYRNFCNSSDDNNSD----QINNWQCH-YDESKKSGQNDNCVEGTWQNFK 587
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5642g040371
(61 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7080g046650
(228 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609040 variant erythrocyte surface antigen-1, alpha subun... 30 0.097
XP_001351517 PfEMP1 (Establishment) [Plasmodium falciparum] 27 1.5
XP_001611365 variant erythrocyte surface antigen-1, alpha subun... 27 1.7
XP_001609935 variant erythrocyte surface antigen-1, alpha subun... 26 2.6
XP_001610196 variant erythrocyte surface antigen-1, alpha subun... 26 2.9
XP_001608670 variant erythrocyte surface antigen-1, alpha subun... 25 3.7
XP_001611441 variant erythrocyte surface antigen-1, beta subuni... 25 4.9
XP_656181 Hgl2 (Adhesin) [Entamoeba histolytica] 25 6.7
XP_001609041 variant erythrocyte surface antigen-1, alpha subun... 24 9.0
XP_655415 Hgl (Adhesin) [Entamoeba histolytica] 24 9.4
>M.Javanica_Scaff7080g046650 on XP_001609040 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1335
Score = 30.4 bits (67), Expect = 0.097, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 17/43 (39%), Gaps = 9/43 (20%)
Query: 22 CQKCANDVCGPP---------CKTSKSACDNCKIIDLPKRCGC 55
C KC D CG P CK S C + ++CGC
Sbjct: 178 CDKCDGDKCGKPGAGGGCQCQCKGGASGCTSASDCKCDRKCGC 220
>M.Javanica_Scaff7080g046650 on XP_001351517 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2193
Score = 26.6 bits (57), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 12/81 (14%)
Query: 97 KTCPAVKETCKECKNRICD--YPCKSSKSACNNCQKIDVPKQCESCPSYNSTCFDCKERV 154
KTC VKE + D PCK + N+ ++ V +Q E +D K+
Sbjct: 63 KTCDLVKEYYEHFNGDASDKRQPCKKDTNG-NDVERFSVKQQAE---------YDNKKMK 112
Query: 155 CGHPCSIKNDQACNNCIELDL 175
C + + KN+ AC + L+L
Sbjct: 113 CSNGSNGKNEGACASFRRLNL 133
>M.Javanica_Scaff7080g046650 on XP_001611365 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1335
Score = 26.6 bits (57), Expect = 1.7, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 13/82 (15%)
Query: 60 VNETCDQCKHRICDYPCSVSDSACKKIVKLLMFHKLCKTCPAVKETCKECKNRICDYP-C 118
+ E K I Y + D+ +I++ F+K AVKE IC+ P C
Sbjct: 804 LKEVLKNIKDEIEQYESDMDDNT-GRIIQEKTFYK------AVKELIS-----ICNSPKC 851
Query: 119 KSSKSACNNCQKIDVPKQCESC 140
S KS N C + K C+ C
Sbjct: 852 PSCKSHSNKCGRQPQSKYCDKC 873
>M.Javanica_Scaff7080g046650 on XP_001609935 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1317
Score = 25.8 bits (55), Expect = 2.6, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 113 ICDYP-CKSSKSACNNCQKIDVPKQCESC 140
IC+ P C + C K VP+QC +C
Sbjct: 838 ICNSPKCSACDQHSAKCGKPPVPRQCPTC 866
>M.Javanica_Scaff7080g046650 on XP_001610196 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1330
Score = 25.8 bits (55), Expect = 2.9, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 113 ICDYP-CKSSKSACNNCQKIDVPKQCESC 140
IC+ P C S KS N C + K C+ C
Sbjct: 839 ICNSPKCPSCKSHSNKCGRQPQSKYCDKC 867
>M.Javanica_Scaff7080g046650 on XP_001608670 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1320
Score = 25.4 bits (54), Expect = 3.7, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 113 ICDYP-CKSSKSACNNCQKIDVPKQCESC 140
IC+ P C S KS C K P C++C
Sbjct: 840 ICNSPKCPSCKSHSTKCGKEGKPTICKTC 868
>M.Javanica_Scaff7080g046650 on XP_001611441 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1205
Score = 25.0 bits (53), Expect = 4.9, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 20/53 (37%), Gaps = 9/53 (16%)
Query: 94 KLCKTCPAVKETCKECKNRICDYPCKSSKSACNNCQKIDVPKQCESCPSYNST 146
K+C+ CP +C C S CQ PKQC +YN T
Sbjct: 152 KVCE-CPGTGGGGAQC--------CSPGTSGSGTCQCATNPKQCCYKSAYNKT 195
>M.Javanica_Scaff7080g046650 on XP_656181 Hgl2 (Adhesin) [Entamoeba histolytica]
Length = 1286
Score = 24.6 bits (52), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 9/50 (18%)
Query: 25 CANDVCGPPCKTSKSACDNCKIIDLPKRCGCCFPAVNETCDQCKHRICDY 74
C D G CK S + CK C CD KH ICDY
Sbjct: 585 CGGDSTGSVCKCDASTGNQCK---------CNKVENGNYCDSSKHEICDY 625
>M.Javanica_Scaff7080g046650 on XP_001609041 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1318
Score = 24.3 bits (51), Expect = 9.0, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 113 ICDYP-CKSSKSACNNCQKIDVPKQCESC 140
IC+ P C + +S C K P C++C
Sbjct: 833 ICNSPKCSACESHSTKCGKPPTPSFCQTC 861
>M.Javanica_Scaff7080g046650 on XP_655415 Hgl (Adhesin) [Entamoeba histolytica]
Length = 1291
Score = 23.9 bits (50), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 21/54 (38%), Gaps = 9/54 (16%)
Query: 25 CANDVCGPPCKTSKSACDNCKIIDLPKRCGCCFPAVNETCDQCKHRICDYPCSV 78
C D G CK CD+ +C C CD KH+ICDY +
Sbjct: 591 CGGDSTGSVCK-----CDST----TNNQCQCTQVQNGNYCDSNKHQICDYTGTT 635
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3212g027841
(122 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum] 24 3.8
XP_001351561 PfEMP1 (Establishment) [Plasmodium falciparum] 23 8.6
XP_001348946 PfEMP1 (Establishment) [Plasmodium falciparum] 23 8.6
XP_966160 PfEMP1 (Establishment) [Plasmodium falciparum] 23 9.2
>M.Javanica_Scaff3212g027841 on XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2994
Score = 23.9 bits (50), Expect = 3.8, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Query: 62 KNKEGDYLPSAANMYLMKYSKTLESSAKEWAKQ--CTISHSHGKFGENLFMSTNKKLSDC 119
+NKE + L N Y + K ++S + K T++ +G NLF+ T K+ S C
Sbjct: 390 ENKENE-LDKQKNKYTKEIEKLKDNSKSNYDKNFYLTLTKKYGSI--NLFLDTLKEGSHC 446
Query: 120 GF 121
+
Sbjct: 447 SY 448
>M.Javanica_Scaff3212g027841 on XP_001351561 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3553
Score = 22.7 bits (47), Expect = 8.6, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 80 YSKTLESSAKEWAKQCTISHSHGKFGENLFMSTNKKLSDC 119
Y K K+ ++C+ S GK G + T K+ +DC
Sbjct: 1529 YCKAQSQEYKKLEEKCSQCKSKGKGGNECYRET-KECNDC 1567
>M.Javanica_Scaff3212g027841 on XP_001348946 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3553
Score = 22.7 bits (47), Expect = 8.6, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 80 YSKTLESSAKEWAKQCTISHSHGKFGENLFMSTNKKLSDC 119
Y K K+ ++C+ S GK G + T K+ +DC
Sbjct: 1529 YCKAQSQEYKKLEEKCSQCKSKGKGGNECYRET-KECNDC 1567
>M.Javanica_Scaff3212g027841 on XP_966160 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2394
Score = 22.7 bits (47), Expect = 9.2, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 27/68 (39%)
Query: 26 RYLYLFELSLHLLKEIRKIILHCHNHYRSILAKGKAKNKEGDYLPSAANMYLMKYSKTLE 85
R ++ E S KE K+ S KGK K +GD + + +Y K +
Sbjct: 1016 RLRWMTEWSEWFCKEQSKLYGELVKDCASCKKKGKEKCTQGDNDCTPCDKKCKEYGKKIR 1075
Query: 86 SSAKEWAK 93
+ +W K
Sbjct: 1076 TWKDQWTK 1083
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6291g043284
(262 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001608795 variant erythrocyte surface antigen-1, alpha subun... 25 4.8
XP_001610720 variant erythrocyte surface antigen-1, beta subuni... 25 7.1
XP_001610567 variant erythrocyte surface antigen-1, alpha subun... 25 8.2
>M.Javanica_Scaff6291g043284 on XP_001608795 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1323
Score = 25.4 bits (54), Expect = 4.8, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 3/27 (11%)
Query: 210 DSSNLGKCPSCDCHNCGINLCGNGDEP 236
D N KC +CD H+ N CG +P
Sbjct: 827 DICNTAKCSACDQHS---NKCGKPSQP 850
>M.Javanica_Scaff6291g043284 on XP_001610720 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1102
Score = 24.6 bits (52), Expect = 7.1, Method: Composition-based stats.
Identities = 9/23 (39%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Query: 211 SSNLGKCPSCDCHNCGINLCGNG 233
S+ +G+ CDC+ G+N C G
Sbjct: 156 STGIGR--KCDCNGSGVNCCSPG 176
>M.Javanica_Scaff6291g043284 on XP_001610567 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1315
Score = 24.6 bits (52), Expect = 8.2, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 3/29 (10%)
Query: 208 FLDSSNLGKCPSCDCHNCGINLCGNGDEP 236
F+ N KCP+CD H+ CG P
Sbjct: 826 FISICNSPKCPTCDQHSTK---CGQQGTP 851
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2973g026378
(120 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_650534 HgI (Adhesin) [Entamoeba histolytica] 25 1.2
XP_845633 VSG (Establishment) [Trypanosoma brucei] 25 1.8
XP_821693 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.5
XP_001351877 PfEMP1 (Establishment) [Plasmodium falciparum] 23 4.6
XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum] 23 6.2
>M.Javanica_Scaff2973g026378 on XP_650534 HgI (Adhesin) [Entamoeba histolytica]
Length = 1207
Score = 25.4 bits (54), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 43/100 (43%), Gaps = 25/100 (25%)
Query: 22 NKCIVEGKSCINDKQQGNLCCQTSKKLYCVEDVKP--------KYYVCSSKSCTY-NGKC 72
NKC+ K C+ GN C S C +D+KP + +VC + SC NG+C
Sbjct: 456 NKCVSTVK-CLEPYCSGNNCAFRSN---CTDDIKPSSIIESGVEKFVCRTYSCDRTNGEC 511
Query: 73 GKN-VGSCCYGSKCINGKCQTCAGGSSSCSTYPCCAGTCV 111
N + S Y C SS C Y C AGTC+
Sbjct: 512 IPNTLQSSSY-----------CPKLSSKCEEYYCSAGTCM 540
>M.Javanica_Scaff2973g026378 on XP_845633 VSG (Establishment) [Trypanosoma brucei]
Length = 488
Score = 24.6 bits (52), Expect = 1.8, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 7/62 (11%)
Query: 11 FSTFLLFNYVDNKCIVEGKSCINDKQQGNLCCQTSKKLYCVEDVKPKYYVCSSKSCTYNG 70
F+T L F+Y + KS I +++ +KK C ED + Y+ + +G
Sbjct: 397 FATTLAFSYSRRQ---RKKSAITAQKE----VSDTKKEKCKEDTEKSKYIADTDCEHKDG 449
Query: 71 KC 72
KC
Sbjct: 450 KC 451
>M.Javanica_Scaff2973g026378 on XP_821693 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 834
Score = 24.3 bits (51), Expect = 2.5, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 20 VDNKCIVEGKSCINDKQQGNLC 41
V CI EG C DK++ +C
Sbjct: 147 VPEGCICEGGKCPADKEEKRVC 168
>M.Javanica_Scaff2973g026378 on XP_001351877 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2270
Score = 23.5 bits (49), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 22/47 (46%)
Query: 11 FSTFLLFNYVDNKCIVEGKSCINDKQQGNLCCQTSKKLYCVEDVKPK 57
F + + D K I+EGK+ + D GN K ++++ PK
Sbjct: 1097 FLRQMFYTLADYKDILEGKNIVVDMLSGNDKDTMKKIQAKIDEILPK 1143
>M.Javanica_Scaff2973g026378 on XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2178
Score = 23.1 bits (48), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 65 SCTYNGKCGKNVGSCCY 81
+CT++GKC KN C+
Sbjct: 496 TCTFDGKCTKNPEELCH 512
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3940g032027
(153 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Q27895 NTPase2 (Establishment) [Toxoplasma gondii] 23 9.3
>M.Javanica_Scaff3940g032027 on Q27895 NTPase2 (Establishment) [Toxoplasma gondii]
Length = 255
Score = 23.1 bits (48), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Query: 35 EGGQELEKLLTREDLGAKGSYGGGNHKAREKTKRLPVILVHGITASAAGMEPIRKYFKN 93
EG ++L +LL + + S K + K +PV+L S AG+ +++++
Sbjct: 147 EGAKKLMQLLEEDTVAILDSQLNEEQKVQVKALGIPVML-----CSTAGVRDFHEWYRD 200
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff298g004559
(442 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001610567 variant erythrocyte surface antigen-1, alpha subun... 25 9.6
>M.Javanica_Scaff298g004559 on XP_001610567 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1315
Score = 25.0 bits (53), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 10/71 (14%)
Query: 375 EEHLSENNEEENLESKEVFNEIKNKMIG-DNMEEENEEKDEENI-----KLEKST----T 424
E L + NEE L+ KEV I N ++ N +E E K +E I KL+++
Sbjct: 661 RETLGKVNEEVALKVKEVLQAIGNVVVQLGNAQEALEGKKKEAIEGVKAKLQEAKEGLDK 720
Query: 425 IKTATEEKKKE 435
+TA EE K+
Sbjct: 721 ARTALEEAAKK 731
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7801g049535
(116 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001610497 variant erythrocyte surface antigen-1, alpha subun... 30 0.025
XP_001612314 variant erythrocyte surface antigen-1, alpha subun... 27 0.28
XP_816303 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.72
XP_001610713 variant erythrocyte surface antigen-1, alpha subun... 24 3.4
XP_001610714 variant erythrocyte surface antigen-1, alpha subun... 23 5.9
AAY44831 MSA-1 (Invasion) [Babesia bovis] 23 6.0
XP_001610196 variant erythrocyte surface antigen-1, alpha subun... 23 7.2
XP_001610567 variant erythrocyte surface antigen-1, alpha subun... 23 8.3
XP_001609533 variant erythrocyte surface antigen-1, alpha subun... 23 8.4
XP_001611736 variant erythrocyte surface antigen-1, alpha subun... 23 8.4
XP_001609565 variant erythrocyte surface antigen-1, alpha subun... 23 8.7
XP_001609935 variant erythrocyte surface antigen-1, alpha subun... 23 8.7
XP_001608670 variant erythrocyte surface antigen-1, alpha subun... 23 9.1
XP_001612315 variant erythrocyte surface antigen-1, beta subuni... 22 9.5
>M.Javanica_Scaff7801g049535 on XP_001610497 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1315
Score = 30.0 bits (66), Expect = 0.025, Method: Composition-based stats.
Identities = 11/19 (57%), Positives = 14/19 (73%)
Query: 64 GDGGGDGGGGCGCHTGVSC 82
G+ G +GGG CGC + VSC
Sbjct: 1146 GEHGSNGGGQCGCQSIVSC 1164
>M.Javanica_Scaff7801g049535 on XP_001612314 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1308
Score = 26.9 bits (58), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 64 GDGGGDGGGGCGCHTGVSCGCV 85
G+ G +GGG CGC + VSC V
Sbjct: 1141 GEHGSNGGGQCGCQSVVSCTGV 1162
>M.Javanica_Scaff7801g049535 on XP_816303 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 955
Score = 25.8 bits (55), Expect = 0.72, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 76 CHTGVSCGCVCCESPPKKRPKPRNYWR 102
C +G + V SP K PKP WR
Sbjct: 59 CGSGGAAQSVASPSPQKSSPKPYFDWR 85
>M.Javanica_Scaff7801g049535 on XP_001610713 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1294
Score = 23.9 bits (50), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 12/19 (63%)
Query: 64 GDGGGDGGGGCGCHTGVSC 82
G G GGG CGC + VSC
Sbjct: 1112 GSHGVTGGGLCGCQSIVSC 1130
>M.Javanica_Scaff7801g049535 on XP_001610714 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1231
Score = 23.1 bits (48), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 68 GDGGGGCGCHTGVSCGCV 85
G G G CGC + VSC V
Sbjct: 1062 GQGSGQCGCQSIVSCTGV 1079
>M.Javanica_Scaff7801g049535 on AAY44831 MSA-1 (Invasion) [Babesia bovis]
Length = 310
Score = 23.1 bits (48), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 9 FYIFICSLQSLTKNVYGVEGSSNKIFKLEQLEPSYNEDEQKLIIDRKKRH 58
F SL S+ N++ ++ K K + EP E++++ +D K+H
Sbjct: 124 FNAIFDSLMSMFNNIHHMD----KFLKSLKWEPQLTEEDRQKAVDYFKKH 169
>M.Javanica_Scaff7801g049535 on XP_001610196 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1330
Score = 22.7 bits (47), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 68 GDGGGGCGCHTGVSCGCV 85
G G G CGC + VSC V
Sbjct: 1161 GQGSGQCGCQSIVSCTGV 1178
>M.Javanica_Scaff7801g049535 on XP_001610567 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1315
Score = 22.7 bits (47), Expect = 8.3, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 64 GDGGGDGGGGCGCHTGVSC 82
G G GG C C + VSC
Sbjct: 1137 GSHGNKGGAQCLCQSIVSC 1155
>M.Javanica_Scaff7801g049535 on XP_001609533 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1162
Score = 22.7 bits (47), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 68 GDGGGGCGCHTGVSC 82
G G G CGC + VSC
Sbjct: 1120 GQGSGQCGCQSIVSC 1134
>M.Javanica_Scaff7801g049535 on XP_001611736 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1365
Score = 22.7 bits (47), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 68 GDGGGGCGCHTGVSC 82
G G G CGC + VSC
Sbjct: 1171 GQGSGQCGCQSIVSC 1185
>M.Javanica_Scaff7801g049535 on XP_001609565 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1341
Score = 22.7 bits (47), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 68 GDGGGGCGCHTGVSCGCV 85
G G G CGC + VSC V
Sbjct: 1177 GQGSGQCGCQSIVSCTGV 1194
>M.Javanica_Scaff7801g049535 on XP_001609935 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1317
Score = 22.7 bits (47), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 68 GDGGGGCGCHTGVSCGCV 85
G G G CGC + VSC V
Sbjct: 1156 GQGSGQCGCQSIVSCTGV 1173
>M.Javanica_Scaff7801g049535 on XP_001608670 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1320
Score = 22.7 bits (47), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 68 GDGGGGCGCHTGVSCGCV 85
G G G CGC + VSC V
Sbjct: 1153 GQGSGQCGCQSIVSCTGV 1170
>M.Javanica_Scaff7801g049535 on XP_001612315 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1140
Score = 22.3 bits (46), Expect = 9.5, Method: Composition-based stats.
Identities = 9/16 (56%), Positives = 10/16 (62%)
Query: 67 GGDGGGGCGCHTGVSC 82
GG G CGC + VSC
Sbjct: 995 GGANQGVCGCTSVVSC 1010
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff816g010193
(198 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609751 variant erythrocyte surface antigen-1, alpha subun... 28 0.30
XP_001609618 variant erythrocyte surface antigen-1, alpha subun... 27 0.76
XP_819146 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.3
XP_809961 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.8
XP_001349207 EBA-175 (Adhesin) [Plasmodium falciparum] 24 8.6
XP_815842 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 9.2
>M.Javanica_Scaff816g010193 on XP_001609751 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1298
Score = 28.5 bits (62), Expect = 0.30, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 12/57 (21%)
Query: 62 GSDYIEGALHQPLLPPHHLDGINIPTVASIVNSGSVDDG-----ENGIDRNRIGAFL 113
G DY + QP G+N V+ G+ D NGID+N++GA
Sbjct: 353 GKDYNDNTFRQPA-------GMNYAGYIHTVDKGAFDSSVFKGTGNGIDKNKLGALF 402
>M.Javanica_Scaff816g010193 on XP_001609618 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1325
Score = 27.3 bits (59), Expect = 0.76, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 12/57 (21%)
Query: 62 GSDYIEGALHQPLLPPHHLDGINIPTVASIVNSGSVD-----DGENGIDRNRIGAFL 113
GSD + QP G+N V+ G+ D + NG+D+N++GA
Sbjct: 400 GSDNNDNTFRQPA-------GMNYAGYIHTVDRGAFDSSVFKENSNGVDKNKLGALF 449
>M.Javanica_Scaff816g010193 on XP_819146 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 825
Score = 26.6 bits (57), Expect = 1.3, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 8/51 (15%)
Query: 139 EEVERQPPPLHLRGRNDNPNRI--------NGNWAMTTSGENERKFSNRFD 181
EE + P + + +D+ N + GNWA+ SG+ +K SN ++
Sbjct: 573 EEGDTPIPLMGAKMNDDSENTVLLGLSYKREGNWAVLCSGQTTKKHSNTWE 623
>M.Javanica_Scaff816g010193 on XP_809961 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 916
Score = 24.3 bits (51), Expect = 5.8, Method: Composition-based stats.
Identities = 7/8 (87%), Positives = 8/8 (100%)
Query: 25 PHFPHKYG 32
PH+PHKYG
Sbjct: 229 PHYPHKYG 236
>M.Javanica_Scaff816g010193 on XP_001349207 EBA-175 (Adhesin) [Plasmodium falciparum]
Length = 1462
Score = 23.9 bits (50), Expect = 8.6, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 157 PNRINGNWAMTTSGENERKFSNRFDKIFISFFSLI 191
P+ I+ N ++ NE F+N + F+S SLI
Sbjct: 85 PDNIDKNMSLINKHNNEEMFNNNYQS-FLSTSSLI 118
>M.Javanica_Scaff816g010193 on XP_815842 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 894
Score = 23.9 bits (50), Expect = 9.2, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Query: 81 DGINIPTVASIVNSGSVDDGEN-GIDRN 107
DG ++ T+ ++ G V DGEN ID N
Sbjct: 188 DGADVATLKLLLVKGQVSDGENKKIDWN 215
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6300g043320
(163 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001347691 PfEMP1 (Establishment) [Plasmodium falciparum] 25 3.2
XP_001351517 PfEMP1 (Establishment) [Plasmodium falciparum] 24 5.1
XP_001351513 PfEMP1 (Establishment) [Plasmodium falciparum] 24 5.2
XP_001351514 PfEMP1 (Establishment) [Plasmodium falciparum] 24 5.9
XP_821677 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 7.2
XP_814441 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 8.3
>M.Javanica_Scaff6300g043320 on XP_001347691 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2182
Score = 24.6 bits (52), Expect = 3.2, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 91 PMRVKHKSSDMPPSFRREYFKQLA 114
P KS D+PP F R+ F +A
Sbjct: 1067 PQSKLQKSGDIPPPFLRQMFYTIA 1090
>M.Javanica_Scaff6300g043320 on XP_001351517 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2193
Score = 24.3 bits (51), Expect = 5.1, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 6/48 (12%)
Query: 73 AEEGIVG------HGMAGEQLNIRPMRVKHKSSDMPPSFRREYFKQLA 114
AE+G+ G + GE+ P ++ ++PP F R+ F L
Sbjct: 1035 AEQGLTGGLPGLSSSVLGEEEEQPPQSKLQQTGEIPPDFLRQMFYTLG 1082
>M.Javanica_Scaff6300g043320 on XP_001351513 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2152
Score = 24.3 bits (51), Expect = 5.2, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 24 KDKEKADEEPSSPRKV--EESGGRSRGRGRG 52
K K+K DEE KV SGGR++ RG
Sbjct: 401 KQKQKYDEEIKKYTKVASSSSGGRAKRAARG 431
>M.Javanica_Scaff6300g043320 on XP_001351514 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2201
Score = 23.9 bits (50), Expect = 5.9, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 24 KDKEKADEEPSSPRKV--EESGGRSRGRGRG 52
K K+K DEE KV SGGR++ RG
Sbjct: 401 KQKQKYDEEIKKYTKVASSSSGGRAKRAARG 431
>M.Javanica_Scaff6300g043320 on XP_821677 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 861
Score = 23.5 bits (49), Expect = 7.2, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 104 SFRREYFKQLAAAQNKGKGIQFNEGGIPMR 133
++R EYF A NK G++ E GI +
Sbjct: 508 TWRDEYFGVNATVTNKDLGVEKTENGITFK 537
>M.Javanica_Scaff6300g043320 on XP_814441 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 931
Score = 23.5 bits (49), Expect = 8.3, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 26 KEKADEEPSSPRKV-EESGGRSRGRGRGRITGGRRPPITGEG 66
K + EE S+ + V EES S+ G G G P TGEG
Sbjct: 778 KTSSGEEESATQLVSEESSDGSKNVGGGSSPGSDAPVETGEG 819
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff647g008512
(758 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_806503 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.49
XP_001351438 PfEMP1 (Establishment) [Plasmodium falciparum] 27 3.9
XP_001351439 PfEMP1 (Establishment) [Plasmodium falciparum] 27 4.2
XP_807454 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 5.6
>M.Javanica_Scaff647g008512 on XP_806503 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 234
Score = 29.6 bits (65), Expect = 0.49, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 444 HLKTRMGKGEIVYYGYSDAKGNNTDNAWN 472
H R GKG+ + + YSD D+AWN
Sbjct: 128 HENVRKGKGQSIRHFYSDVVAGYIDSAWN 156
>M.Javanica_Scaff647g008512 on XP_001351438 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2312
Score = 27.3 bits (59), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 78 GTEEEFKRVLEWEE-KFFKAFIGEEKYK-EYVKLSEDKDKDDQLV---KFVKPYARKLKE 132
G ++ ++ +W + KF + E+KYK EY KL++DK DD+ + K + + ++LK
Sbjct: 1357 GCYKQCRKYKKWIDIKFVEYHNQEKKYKDEYGKLTKDKSSDDKKLEGYKCAENFLKELKH 1416
Query: 133 KLPGEKN 139
P E N
Sbjct: 1417 CKPSEDN 1423
>M.Javanica_Scaff647g008512 on XP_001351439 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2326
Score = 27.3 bits (59), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 78 GTEEEFKRVLEWEE-KFFKAFIGEEKYK-EYVKLSEDKDKDDQLV---KFVKPYARKLKE 132
G ++ ++ +W + KF + E+KYK EY KL++DK DD+ + K + + ++LK
Sbjct: 1371 GCYKQCRKYKKWIDIKFVEYHNQEKKYKDEYGKLTKDKSSDDKKLEGYKCAENFLKELKH 1430
Query: 133 KLPGEKN 139
P E N
Sbjct: 1431 CKPSEDN 1437
>M.Javanica_Scaff647g008512 on XP_807454 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 825
Score = 26.9 bits (58), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 485 NLKEFGAENGSDAL----KAMWMTIEIDEDSDEVKSLLINNKED 524
NLKEF A GS L ++ + ++E +D V S++I +K++
Sbjct: 276 NLKEFAASGGSGVLMEDGTLVFSLMAVNEKNDGVYSMIIYSKDN 319
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4380g034304
(103 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3638g030293
(135 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_816556 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.9
XP_820741 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 7.0
AAC80459 Oligopeptidase B (Others) [Trypanosoma brucei] 23 9.9
>M.Javanica_Scaff3638g030293 on XP_816556 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 807
Score = 23.9 bits (50), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 9/35 (25%), Positives = 19/35 (54%)
Query: 16 VVVSLPIADKTMQKRHAVPVYVAPAYHYAPSGPAS 50
++V+LP+ K +K+ + +++ H GP S
Sbjct: 392 MLVTLPVFSKEKEKKGVLHLWLTDNTHIVDIGPVS 426
>M.Javanica_Scaff3638g030293 on XP_820741 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 894
Score = 23.1 bits (48), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Query: 44 APSGPASSSFVSGGGGSGGGIQSVIGGGYGLPGSSFVAGGGGGSGG 89
PS S S G S G Q+V GGG+ G + GG+ G
Sbjct: 794 TPSAEEDSLVQSASGTSPDGTQTV-GGGFTADGEPTMETREGGTNG 838
>M.Javanica_Scaff3638g030293 on AAC80459 Oligopeptidase B (Others) [Trypanosoma brucei]
Length = 715
Score = 22.7 bits (47), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 25 KTMQKRHAVPVYVAPAYHYAPSGPASSSFVSGGGGSGGGI 64
K + KR+ ++A A H SG + + +S G S GG+
Sbjct: 528 KYLTKRNTFMDFIACAEHLISSGLTTPAQLSCEGRSAGGL 567
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff25536g091051
(246 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_812956 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.8
XP_808432 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 5.7
XP_001350798 PfEMP1 (Establishment) [Plasmodium falciparum] 25 5.8
>M.Javanica_Scaff25536g091051 on XP_812956 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1005
Score = 25.4 bits (54), Expect = 3.8, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 163 NNRPYYWGQQYHPSYQGGGYGGGYGG--GGGGYGA 195
NN+ W + Y + Q GY G GGGG GA
Sbjct: 179 NNKKLLWNETYLVNPQAIGYSGSLTEFLGGGGSGA 213
>M.Javanica_Scaff25536g091051 on XP_808432 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 831
Score = 24.6 bits (52), Expect = 5.7, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 34/85 (40%), Gaps = 10/85 (11%)
Query: 163 NNRPYYWGQQYHPSYQGGGYGGGY----GGGGGGYGAAPSKTMCRMAIEPDDPVLGQ-VY 217
NN+ W + Q GY G + GGGG G K + M + D GQ V
Sbjct: 217 NNKKLVWNETLVVKPQAIGYSGAFTEFLGGGGSGAVMRDGKLVFPMQAKKKD---GQRVL 273
Query: 218 MSDNTRPKEIVWTCEIHEECCGYEC 242
+S + P + W E+ E G C
Sbjct: 274 LSMSFIPSKNKW--ELSLETPGNGC 296
>M.Javanica_Scaff25536g091051 on XP_001350798 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2359
Score = 25.0 bits (53), Expect = 5.8, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 65 GRRSITDRLLGRNKGGGYGGNRNRGVMAGAAGGG 98
GR + + G+N GGG G+R +G + + G
Sbjct: 470 GRINFKNVNSGKNSGGGESGDRGKGASSTSDTSG 503
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff8040g050453
(66 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2511g023439
(221 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_965997 PfEMP1 (Establishment) [Plasmodium falciparum] 29 0.23
>M.Javanica_Scaff2511g023439 on XP_965997 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2879
Score = 29.3 bits (64), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query: 76 CSHCNFKCIELDSFLLHRKEHVQLLQQRLMTIIKRSANDNVLVKEN------KTRFSRSA 129
C+ C+ KCI D +L +R++ + + + IK +DN + N K+ + + A
Sbjct: 343 CTPCSNKCIPYDLWLRNRRDEFNMQKGKYENEIKTYESDNDISNSNINTEYYKSFYKKFA 402
Query: 130 RSD 132
+SD
Sbjct: 403 KSD 405
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6152g042687
(472 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351321 PfEMP1 (Establishment) [Plasmodium falciparum] 37 0.003
XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum] 29 0.63
XP_001351561 PfEMP1 (Establishment) [Plasmodium falciparum] 28 1.2
XP_001348946 PfEMP1 (Establishment) [Plasmodium falciparum] 28 1.2
XP_001351513 PfEMP1 (Establishment) [Plasmodium falciparum] 28 1.8
XP_001350413 PfEMP1 (Establishment) [Plasmodium falciparum] 27 4.2
XP_001351563 PfEMP1 (Establishment) [Plasmodium falciparum] 26 5.5
>M.Javanica_Scaff6152g042687 on XP_001351321 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3467
Score = 37.0 bits (84), Expect = 0.003, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 317 LNTNTLPNNFIKNLFASFGSLKEWHFIVKISEGDEHSLEMSKNYSNVFLTSWAPQRAILE 376
L + T+P NF + ++ +F ++ F I+ D H L++SKN N Q++++
Sbjct: 1300 LKSGTIPENFKRQMYYTFADYRDIFFGTDITSHD-HILDVSKNAKNKLKEKNGEQKSVII 1358
Query: 377 HPNTKLFI----SHGGYNSLMEAALCA 399
+ KL HG + + E LCA
Sbjct: 1359 IDDEKLLADWWKEHG--HEIWEGMLCA 1383
Score = 32.0 bits (71), Expect = 0.088, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 30/52 (57%)
Query: 313 LGSLLNTNTLPNNFIKNLFASFGSLKEWHFIVKISEGDEHSLEMSKNYSNVF 364
L + L + +P++F + +F +FG +++ F IS+G E++K ++F
Sbjct: 1670 LQNQLESGIIPDDFKRQMFYTFGDYRDFLFGTDISKGHGIGSELAKKIDSLF 1721
>M.Javanica_Scaff6152g042687 on XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3346
Score = 29.3 bits (64), Expect = 0.63, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 29/53 (54%)
Query: 312 SLGSLLNTNTLPNNFIKNLFASFGSLKEWHFIVKISEGDEHSLEMSKNYSNVF 364
+L + L T+P++F + +F ++G +++ F IS+G + K + +F
Sbjct: 1313 NLQTQLKDGTIPDDFKRQMFYTYGDYRDFLFGTDISKGLGEGTALEKQINILF 1365
>M.Javanica_Scaff6152g042687 on XP_001351561 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3553
Score = 28.5 bits (62), Expect = 1.2, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 317 LNTNTLPNNFIKNLFASFGSLKEWHFIVKISEGDEHSLEMSK---NYSNVF 364
LN+ T+P++F + +F +FG ++ IS + S + K N +VF
Sbjct: 1816 LNSGTIPDDFKRQMFYTFGDYRDLCLDTDISSKADTSTGVGKVKINIDSVF 1866
>M.Javanica_Scaff6152g042687 on XP_001348946 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3553
Score = 28.5 bits (62), Expect = 1.2, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 317 LNTNTLPNNFIKNLFASFGSLKEWHFIVKISEGDEHSLEMSK---NYSNVF 364
LN+ T+P++F + +F +FG ++ IS + S + K N +VF
Sbjct: 1816 LNSGTIPDDFKRQMFYTFGDYRDLCLDTDISSKADTSTGVGKVKINIDSVF 1866
>M.Javanica_Scaff6152g042687 on XP_001351513 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2152
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 317 LNTNTLPNNFIKNLFASFGSLKEWHFIVKISEGDEHSLEMSKNYSNVFLTSWAP 370
L T+P++F++ +F +FG ++ F I G++ ++ N VF S P
Sbjct: 1028 LEDGTIPDDFLRQMFYTFGDYRDIFFGNNIGSGNDVE-KVKPNIDKVFENSEKP 1080
>M.Javanica_Scaff6152g042687 on XP_001350413 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2860
Score = 26.6 bits (57), Expect = 4.2, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 76 VKKISVRTDLNKAKETIQGRLTEIYFKEATAW 107
V+K + L + + +QGRL++ F T+W
Sbjct: 37 VQKQAYSEALTRGRSALQGRLSDARFLHGTSW 68
>M.Javanica_Scaff6152g042687 on XP_001351563 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2149
Score = 26.2 bits (56), Expect = 5.5, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Query: 89 KETIQGRLTEIYFKEATAWSLITGYKN--DEDFQNTINEVCEHFLDTQTELIEQLKN 143
K+ I+ + TE Y + A+ TG K +E+ + +N VCE + + +E+LKN
Sbjct: 1209 KKWIEKKKTE-YENQQKAY---TGQKKKYEEESKGGVNGVCETLQENAAQFLERLKN 1261
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff25066g090323
(123 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001611442 variant erythrocyte surface antigen-1, alpha subun... 24 3.4
XP_814930 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.3
XP_815479 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.5
XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum] 23 6.8
>M.Javanica_Scaff25066g090323 on XP_001611442 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1350
Score = 23.9 bits (50), Expect = 3.4, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 8/54 (14%)
Query: 47 FDNLHGVKGEDTLKDDILQDYQNLDVGKRNFNSDVTLGYVTPWNN------HGY 94
+NL G+K + I Q + L+ K+N GY+ P N HG+
Sbjct: 778 LENLKGIKHDGETSQAISQARKALEAAKKNAGKGA--GYIDPCKNAVSAAIHGF 829
>M.Javanica_Scaff25066g090323 on XP_814930 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 938
Score = 23.5 bits (49), Expect = 4.3, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 27/68 (39%)
Query: 23 EDDNNDEQLGDFEIGEAFDEDFETFDNLHGVKGEDTLKDDILQDYQNLDVGKRNFNSDVT 82
E+ N G F I ++ + D + +N G D ++DI + F +
Sbjct: 842 EETVNQSASGTFSITDSTEGDVSSDENGETTGGADGQEEDIQPQDGEANAAALGFALKSS 901
Query: 83 LGYVTPWN 90
LG + W+
Sbjct: 902 LGTSSQWD 909
>M.Javanica_Scaff25066g090323 on XP_815479 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1047
Score = 23.5 bits (49), Expect = 4.5, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 45 ETFDNLHGVKGEDTLKDDILQDYQNLDVGKRNFNS 79
E DN+ +GE++ +D+ + Q +D N N+
Sbjct: 949 EDTDNISRTEGEESSSEDVKEVPQTVDTAPGNTNT 983
>M.Javanica_Scaff25066g090323 on XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2178
Score = 23.1 bits (48), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 5/59 (8%)
Query: 57 DTLKDDILQDYQNLDVGKRNFNSDVTLGYVTPWNNHGYDVAKWAAQKFTHISPVWFQLK 115
DT K +I++ Y+N + NSD + W H YD +K + Q + W K
Sbjct: 534 DTTKSNIVEKYRNFCNSSDDNNSD----QINNWQCH-YDESKKSGQNDNCVEGTWQNFK 587
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff28101g094619
(143 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349438 PfEMP1 (Establishment) [Plasmodium falciparum] 28 0.27
XP_001609619 variant erythrocyte surface antigen-1, beta subuni... 27 0.56
XP_818096 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.8
XP_845069 VSG (Establishment) [Trypanosoma brucei] 24 4.6
AAD55381 GRA8 (Establishment) [Toxoplasma gondii] 23 5.3
XP_001351438 PfEMP1 (Establishment) [Plasmodium falciparum] 23 6.6
XP_001351439 PfEMP1 (Establishment) [Plasmodium falciparum] 23 6.6
XP_807549 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 6.7
XP_815151 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 8.6
>M.Javanica_Scaff28101g094619 on XP_001349438 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2265
Score = 27.7 bits (60), Expect = 0.27, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 81 TTTPMPTTVTTEETTTTNTTGAPSTEPMNTSYFIIGPP 118
T++ M T+ T ETT+ ++ P+ S F++ PP
Sbjct: 1213 TSSAMSTSPRTSETTSASSDNTPTLNNPKLSDFVLRPP 1250
>M.Javanica_Scaff28101g094619 on XP_001609619 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1086
Score = 26.6 bits (57), Expect = 0.56, Method: Composition-based stats.
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 35 QTTPSEVLSQLAQSLTPSPERPNTVMPV 62
+ TP++ + + S+TPSP +P T+ +
Sbjct: 366 KVTPAKPATTSSASVTPSPRKPRTIREI 393
>M.Javanica_Scaff28101g094619 on XP_818096 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 861
Score = 25.0 bits (53), Expect = 1.8, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 7/76 (9%)
Query: 48 SLTPSPERPNTVMPVPPL-----NTTVDVG-VPQSELTMTTTPMPTTV-TTEETTTTNTT 100
S +PS ++ + P P N VG +P++ + TT P T+++TT T+
Sbjct: 745 SDSPSADQEPSAEPASPFVSTDKNVAPSVGELPEAPVEPTTPQQPQQERETQKSTTVGTS 804
Query: 101 GAPSTEPMNTSYFIIG 116
P NTS +G
Sbjct: 805 ATTQEVPANTSQGSVG 820
>M.Javanica_Scaff28101g094619 on XP_845069 VSG (Establishment) [Trypanosoma brucei]
Length = 477
Score = 23.9 bits (50), Expect = 4.6, Method: Composition-based stats.
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 12 IFVFTQSDGENPETNLAV 29
+ VFTQS G+ P TN V
Sbjct: 128 VAVFTQSVGKTPRTNACV 145
>M.Javanica_Scaff28101g094619 on AAD55381 GRA8 (Establishment) [Toxoplasma gondii]
Length = 255
Score = 23.5 bits (49), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 15/33 (45%)
Query: 59 VMPVPPLNTTVDVGVPQSELTMTTTPMPTTVTT 91
V PVPP G+PQ E+ P P TT
Sbjct: 134 VAPVPPYPVGTPTGMPQPEIPAVHHPFPYVTTT 166
>M.Javanica_Scaff28101g094619 on XP_001351438 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2312
Score = 23.5 bits (49), Expect = 6.6, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 2/21 (9%)
Query: 118 PVQDVVNTNTPTPETTPITPE 138
P D+ + NTPTP+ PIT +
Sbjct: 1945 PTSDIPSDNTPTPQ--PITDD 1963
>M.Javanica_Scaff28101g094619 on XP_001351439 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2326
Score = 23.5 bits (49), Expect = 6.6, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 2/21 (9%)
Query: 118 PVQDVVNTNTPTPETTPITPE 138
P D+ + NTPTP+ PIT +
Sbjct: 1959 PTSDIPSDNTPTPQ--PITDD 1977
>M.Javanica_Scaff28101g094619 on XP_807549 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 894
Score = 23.5 bits (49), Expect = 6.7, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Query: 64 PLNTTVDVGVPQSELTMTTTPMPT---TVTTEETTTTNTTGAPSTEPMNTS 111
PL + GV S ++ TTP P TV T T G+ T ++ S
Sbjct: 775 PLTANIGAGVLSSATSIATTPSPDADPTVVTVGGETVQGDGSLQTPGVSVS 825
>M.Javanica_Scaff28101g094619 on XP_815151 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 894
Score = 23.1 bits (48), Expect = 8.6, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Query: 64 PLNTTVDVGVPQSELTMTTTPMPT---TVTTEETTTTNTTGAPSTEPMNTS 111
PL + GV S ++ TTP P TV T T G+ T ++ S
Sbjct: 775 PLTANIGAGVLSSATSIATTPSPDADPTVVTVGGETVQGDGSLQTPGVSVS 825
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2530g023550
(101 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_815560 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.76
XP_809179 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.3
XP_809181 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.5
XP_818689 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.3
CAA07157 Cpa135 (Invasion) [Cryptosporidium parvum] 23 3.4
XP_812152 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.8
XP_820147 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.1
XP_803400 VSG (Establishment) [Trypanosoma brucei] 23 5.5
XP_805786 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.7
XP_812550 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 6.7
XP_817612 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 7.5
>M.Javanica_Scaff2530g023550 on XP_815560 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 922
Score = 25.4 bits (54), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 21/90 (23%)
Query: 14 LIAQIVISAPIADKTV---QKRHAVYAPAYYYPY--YYAPAAPASSSFVSGGGGSGGGIQ 68
L+AQI + + ++ + R A A Y+ P+ + P P + FV G
Sbjct: 134 LMAQISVDDGVTWQSYAGPEDRDAFAASPYWLPFPSSFGPFEPLFA-FVEG--------- 183
Query: 69 SVIGGGYGLPGSSFVAGGGGYGGGGIQSVI 98
Y L + + G+GG G++SVI
Sbjct: 184 ------YDLRNDAMIRFTDGWGGSGLESVI 207
>M.Javanica_Scaff2530g023550 on XP_809179 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 853
Score = 24.6 bits (52), Expect = 1.3, Method: Composition-based stats.
Identities = 10/47 (21%), Positives = 24/47 (51%)
Query: 18 IVISAPIADKTVQKRHAVYAPAYYYPYYYAPAAPASSSFVSGGGGSG 64
+++ ++++ K+ ++ Y P+ Y S + ++G GGSG
Sbjct: 218 MLVKGNVSEEAESKKRILWNDTYAIPWNYKGKQHESLTKLTGSGGSG 264
>M.Javanica_Scaff2530g023550 on XP_809181 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 665
Score = 24.6 bits (52), Expect = 1.5, Method: Composition-based stats.
Identities = 10/47 (21%), Positives = 24/47 (51%)
Query: 18 IVISAPIADKTVQKRHAVYAPAYYYPYYYAPAAPASSSFVSGGGGSG 64
+++ ++++ K+ ++ Y P+ Y S + ++G GGSG
Sbjct: 29 MLVKGNVSEEAESKKRILWNDTYAIPWNYKGKQHESLTKLTGSGGSG 75
>M.Javanica_Scaff2530g023550 on XP_818689 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 844
Score = 23.9 bits (50), Expect = 2.3, Method: Composition-based stats.
Identities = 11/47 (23%), Positives = 22/47 (46%)
Query: 18 IVISAPIADKTVQKRHAVYAPAYYYPYYYAPAAPASSSFVSGGGGSG 64
+++ ++D+ + + + Y P+ Y S + GGGGSG
Sbjct: 223 VLVKGNVSDENQKDKRIYWDDTYAIPWTYKGNQHKSLVRLIGGGGSG 269
>M.Javanica_Scaff2530g023550 on CAA07157 Cpa135 (Invasion) [Cryptosporidium parvum]
Length = 255
Score = 23.1 bits (48), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 66 GIQSVIGGGYGLPGSSFVAGGGGYGGGGIQSVIGGR 101
GI+ ++ G G P + ++G G VIGGR
Sbjct: 155 GIRQLVALGSGSPLAMIISGITDEKGDNCLQVIGGR 190
>M.Javanica_Scaff2530g023550 on XP_812152 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 923
Score = 23.5 bits (49), Expect = 3.8, Method: Composition-based stats.
Identities = 11/47 (23%), Positives = 23/47 (48%)
Query: 18 IVISAPIADKTVQKRHAVYAPAYYYPYYYAPAAPASSSFVSGGGGSG 64
+++ ++ + K+ ++ Y P+ Y S + + GGGGSG
Sbjct: 218 MLVKGNVSKEEESKKRILWNDTYAIPWNYKGKQHESLTKLIGGGGSG 264
>M.Javanica_Scaff2530g023550 on XP_820147 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 878
Score = 23.1 bits (48), Expect = 4.1, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 19/48 (39%)
Query: 43 PYYYAPAAPASSSFVSGGGGSGGGIQSVIGGGYGLPGSSFVAGGGGYG 90
P P+A S G S G Q+V GG + + GG YG
Sbjct: 776 PTVSTPSAGKDSLQQVASGKSSDGTQTVDGGSFSDGDPTVETRGGTYG 823
>M.Javanica_Scaff2530g023550 on XP_803400 VSG (Establishment) [Trypanosoma brucei]
Length = 483
Score = 22.7 bits (47), Expect = 5.5, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Query: 32 RHAVYA--PAYYYPYYYAPAAPASSS---FVSGGGGSGGGIQSVIGGG 74
+HA +A P ++P S+S F++ G GSG G Q + GG
Sbjct: 181 KHASWATVPGLKKFSIHSPEPEVSASDNRFLAVGKGSGNGQQCDVNGG 228
>M.Javanica_Scaff2530g023550 on XP_805786 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 581
Score = 22.7 bits (47), Expect = 5.7, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
Query: 14 LIAQIVISAPIADKTVQKRHAVYAPAYYYPYYYAPAAPASSSFVSGGGGSG 64
L+A +SA +DK + + AY P Y S + + GGGGSG
Sbjct: 219 LVASGNVSAEGSDKRI-----YWNDAYVIPSTYFEKQHESLTRLIGGGGSG 264
>M.Javanica_Scaff2530g023550 on XP_812550 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 795
Score = 22.7 bits (47), Expect = 6.7, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 12 AALIAQIVISAPIADKTVQKRHAVYAPAYYYPYYYAPAAPASSSFVSGGGGSG 64
AA +V S ++ + KR + AY P+ Y S + + GGGGSG
Sbjct: 214 AAKWGLLVASGNVSTEGSDKR-IYWNDAYVIPWTYFEKRHESLTPLIGGGGSG 265
>M.Javanica_Scaff2530g023550 on XP_817612 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 922
Score = 22.3 bits (46), Expect = 7.5, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 74 GYGLPGSSFVAGGGGYGGGGIQSVI 98
GY L + + G+GG G++SVI
Sbjct: 183 GYDLRNDAMIRFTDGWGGSGLESVI 207
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4411g034476
(182 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAR88085 TbcatB (Cysteine proteases) [Trypanosoma brucei] 49 4e-08
P92132 CP2 (Cysteine protease) [Giardia duodenalis] 37 2e-04
CAA54436 CP2 (Cysteine protease) [Trichomonas vaginalis] 35 0.001
AAS38514 CP65 (Cysteine protease) [Trichomonas vaginalis] 33 0.006
AAX77225 Falcipain 2' (Cysteine protease) [Plasmodium falcipa... 32 0.013
CAC67416 Brucipain (Cysteine proteases) [Trypanosoma brucei] 32 0.015
XP_001347833 Falcipain 3 (Cysteine protease) [Plasmodium falc... 32 0.016
ABC02174 Falstatin (Others) [Plasmodium falciparum] 32 0.018
XP_001347836 Falcipain 2 (Cysteine protease) [Plasmodium falc... 32 0.018
AAV98582 CP4 (Cysteine protease) [Trichomonas vaginalis] 32 0.018
CAA54438 CP1 (Cysteine protease) [Trichomonas vaginalis] 31 0.022
CAA54437 CP3 (Cysteine protease) [Trichomonas vaginalis] 31 0.030
CAJ20707 Toxopain-2 (Protease) [Toxoplasma gondii] 29 0.092
PF14_0553 Falcipain1 (Cysteine protease) [Plasmodium falciparum] 30 0.10
XP_821909 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.18
XP_650937 CP5 (Cysteine protease) [Entamoeba histolytica] 27 0.44
XP_844158 VSG (Establishment) [Trypanosoma brucei] 26 1.1
AAC48337 AP33-1 (Adhesin) [Trichomonas vaginalis] 25 1.9
AAC48339 AP33-3 (Adhesin) [Trichomonas vaginalis] 25 2.1
XP_001611737 variant erythrocyte surface antigen-1, beta subuni... 25 2.2
BAA96736 Cruzipain (Cysteine protease) [Trypanosoma cruzi] 24 2.3
BAA96737 Cruzipain (Cysteine protease) [Trypanosoma cruzi] 23 2.8
XP_650156 CP1 (Cysteine protease) [Entamoeba histolytica] 24 6.8
XP_828094 VSG (Establishment) [Trypanosoma brucei] 24 7.5
>M.Javanica_Scaff4411g034476 on AAR88085 TbcatB (Cysteine proteases) [Trypanosoma brucei]
Length = 340
Score = 48.5 bits (114), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 13/105 (12%)
Query: 71 IAQINEQNGGYWKAKVNYYSLLPEN----EQKRICGVQNNGKSKNGDGKPEFPILEKLAN 126
+ ++N N G WKAK Y + +N E KR+ GV K+ N P+ E+ A
Sbjct: 37 VDRVNRLNRGIWKAK---YDGVMQNITLREAKRLNGVIK--KNNNASILPKRRFTEEEAR 91
Query: 127 NDDCVTEIEFDARENWPDCSSFINYIQNQGRCGSCWAVSTASVIT 171
FD+ E WP+C + I I +Q CGSCWAV+ AS ++
Sbjct: 92 AP---LPSSFDSAEAWPNCPT-IPQIADQSACGSCWAVAAASAMS 132
>M.Javanica_Scaff4411g034476 on P92132 CP2 (Cysteine protease) [Giardia duodenalis]
Length = 255
Score = 37.4 bits (85), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Query: 136 FDARENWPDCSSFINYIQNQGRCGSCWAVSTASVI 170
FD RE +P C I + +QG CGSCWA S+ +
Sbjct: 79 FDFREEYPHC---IPEVVDQGGCGSCWAFSSVATF 110
>M.Javanica_Scaff4411g034476 on CAA54436 CP2 (Cysteine protease) [Trichomonas vaginalis]
Length = 255
Score = 34.7 bits (78), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 18/96 (18%)
Query: 71 IAQINEQNGGYWKAKVNYYSLLPENEQKRICGVQNNGKSKNGDGKPEFPILEKLANNDDC 130
+ + N N G+ K +N + L ++E + + G + G+ K + P +D
Sbjct: 51 VQEHNAANKGF-KLGLNKLAHLTQSEYRSLLGAKRLGQKSGNFFKCDAPA-------NDA 102
Query: 131 VTEIEFDARENWPDCSSFINYIQNQGRCGSCWAVST 166
V +W D +N I++QG+CGSCWA S
Sbjct: 103 V---------DWRD-KGIVNKIKDQGQCGSCWAFSA 128
>M.Javanica_Scaff4411g034476 on AAS38514 CP65 (Cysteine protease) [Trichomonas vaginalis]
Length = 206
Score = 32.7 bits (73), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 12/18 (66%), Positives = 15/18 (83%)
Query: 149 INYIQNQGRCGSCWAVST 166
+N IQ+QG+CGSCWA S
Sbjct: 33 VNPIQDQGQCGSCWAFSA 50
>M.Javanica_Scaff4411g034476 on AAX77225 Falcipain 2' (Cysteine protease) [Plasmodium
falciparum]
Length = 484
Score = 32.3 bits (72), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 152 IQNQGRCGSCWAVST-ASVITSYSIHYTKL 180
+++Q CGSCWA S+ SV + Y+I KL
Sbjct: 276 VKDQKNCGSCWAFSSIGSVESQYAIRKNKL 305
>M.Javanica_Scaff4411g034476 on CAC67416 Brucipain (Cysteine proteases) [Trypanosoma brucei]
Length = 450
Score = 32.0 bits (71), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 108 KSKNGDGKPEFPILEKLANNDDCVTEIEFDARENWPDCSSFINYIQNQGRCGSCWAVST 166
+++ +G F +K VT A +W + + +++QG+CGSCWA ST
Sbjct: 98 RARYRNGASYFAAAQKRLRKTVNVTTGRAPAAVDWRE-KGAVTPVKDQGQCGSCWAFST 155
>M.Javanica_Scaff4411g034476 on XP_001347833 Falcipain 3 (Cysteine protease) [Plasmodium
falciparum]
Length = 482
Score = 32.0 bits (71), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 152 IQNQGRCGSCWAVST-ASVITSYSIHYTKL 180
+++Q CGSCWA S+ SV + Y+I KL
Sbjct: 274 VKDQKNCGSCWAFSSIGSVESQYAIRKNKL 303
>M.Javanica_Scaff4411g034476 on ABC02174 Falstatin (Others) [Plasmodium falciparum]
Length = 492
Score = 32.0 bits (71), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 50/114 (43%), Gaps = 12/114 (10%)
Query: 75 NEQNGGYWKAKVNYYS-LLPENEQKRICGVQNNGKSKNGDGKPEF-----PILEKLANND 128
N++ +K +N + L PE + + ++ +G K + +++K D
Sbjct: 206 NKKTNSLYKRGMNKFGDLSPEEFRSKYLNLKTHGPFKTLSPPVSYEANYEDVIKKYKPAD 265
Query: 129 DCVTEIEFDARENWPDCSSFINYIQNQGRCGSCWAVST-ASVITSYSIHYTKLY 181
+ I +D R + +++Q CGSCWA S+ SV + Y+I L+
Sbjct: 266 AKLDRIAYDWR-----LHGGVTPVKDQALCGSCWAFSSVGSVESQYAIRKKALF 314
>M.Javanica_Scaff4411g034476 on XP_001347836 Falcipain 2 (Cysteine protease) [Plasmodium
falciparum]
Length = 492
Score = 32.0 bits (71), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 50/114 (43%), Gaps = 12/114 (10%)
Query: 75 NEQNGGYWKAKVNYYS-LLPENEQKRICGVQNNGKSKNGDGKPEF-----PILEKLANND 128
N++ +K +N + L PE + + ++ +G K + +++K D
Sbjct: 206 NKKTNSLYKRGMNKFGDLSPEEFRSKYLNLKTHGPFKTLSPPVSYEANYEDVIKKYKPAD 265
Query: 129 DCVTEIEFDARENWPDCSSFINYIQNQGRCGSCWAVST-ASVITSYSIHYTKLY 181
+ I +D R + +++Q CGSCWA S+ SV + Y+I L+
Sbjct: 266 AKLDRIAYDWR-----LHGGVTPVKDQALCGSCWAFSSVGSVESQYAIRKKALF 314
>M.Javanica_Scaff4411g034476 on AAV98582 CP4 (Cysteine protease) [Trichomonas vaginalis]
Length = 255
Score = 31.6 bits (70), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 15/18 (83%)
Query: 149 INYIQNQGRCGSCWAVST 166
+N I++QG+CGSCWA S
Sbjct: 100 VNPIKDQGQCGSCWAFSA 117
>M.Javanica_Scaff4411g034476 on CAA54438 CP1 (Cysteine protease) [Trichomonas vaginalis]
Length = 255
Score = 31.2 bits (69), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 15/18 (83%)
Query: 149 INYIQNQGRCGSCWAVST 166
+N I++QG+CGSCWA S
Sbjct: 87 VNPIKDQGQCGSCWAFSA 104
>M.Javanica_Scaff4411g034476 on CAA54437 CP3 (Cysteine protease) [Trichomonas vaginalis]
Length = 255
Score = 30.8 bits (68), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 146 SSFINYIQNQGRCGSCWAVSTASV 169
+ +N I++Q +CGSCWA S V
Sbjct: 109 AKIVNPIKDQAQCGSCWAFSVVQV 132
>M.Javanica_Scaff4411g034476 on CAJ20707 Toxopain-2 (Protease) [Toxoplasma gondii]
Length = 255
Score = 29.3 bits (64), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 10/99 (10%)
Query: 73 QINEQNGGYWKAKVNYYSLLPENE-QKRICGVQNNGKSKNGDGKPEFPILEKLANNDDCV 131
+ Q G + K+N++ L +E +++ G + KS+N + +L N V
Sbjct: 149 HTHNQQGYSYSLKMNHFGDLSRDEFRRKYLGFK---KSRNLKSH-HLGVATELLN----V 200
Query: 132 TEIEFDARENWPDCSSFINYIQNQGRCGSCWAVSTASVI 170
E A +W + +++Q CGSCWA ST +
Sbjct: 201 LPSELPAGVDW-RSRGCVTPVKDQRDCGSCWAFSTTGAL 238
>M.Javanica_Scaff4411g034476 on PF14_0553 Falcipain1 (Cysteine protease) [Plasmodium falciparum]
Length = 569
Score = 29.6 bits (65), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 153 QNQGRCGSCWAVSTASVITS 172
++QG CGSCWA ++ I S
Sbjct: 349 KDQGLCGSCWAFASVGNIES 368
>M.Javanica_Scaff4411g034476 on XP_821909 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 954
Score = 28.9 bits (63), Expect = 0.18, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Query: 67 IAGDIAQINEQNGGYWKAKVNYYSLLPENEQKRICGVQNNGKS--KNGDGKPEFPILEKL 124
+ G+++ ++ + YW S E + K + + N G S K DG FP+
Sbjct: 223 VKGNVSTVDGKKRIYWNDTYGLPSAFFEKQHKSLTQLTNGGGSGIKMNDGTFVFPVEATK 282
Query: 125 ANNDD 129
ANN +
Sbjct: 283 ANNKE 287
>M.Javanica_Scaff4411g034476 on XP_650937 CP5 (Cysteine protease) [Entamoeba histolytica]
Length = 318
Score = 27.3 bits (59), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 25/43 (58%), Gaps = 5/43 (11%)
Query: 133 EIEFDARENWPDCSSF-----INYIQNQGRCGSCWAVSTASVI 170
EI +D+R + P+ + + I++Q CGSC++ ++ + I
Sbjct: 86 EIVYDSRGDVPESVDWRAKGKVPAIRDQASCGSCYSFASVAAI 128
>M.Javanica_Scaff4411g034476 on XP_844158 VSG (Establishment) [Trypanosoma brucei]
Length = 490
Score = 26.2 bits (56), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 20/39 (51%)
Query: 36 LNEEEVKKLAEEISLIKEVYDVEINEEQIRKIAGDIAQI 74
+N+EE K L ++L E D E +IR A DI I
Sbjct: 29 INQEEFKALCAFVNLANESVDYAGLEAEIRDAAADIGAI 67
>M.Javanica_Scaff4411g034476 on AAC48337 AP33-1 (Adhesin) [Trichomonas vaginalis]
Length = 255
Score = 25.4 bits (54), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 16 IASFESSEILNIIGNVFDGKLNEEEVKKLAEE 47
+A S ++ I G+ F G+L+ + VK+ A +
Sbjct: 179 LAGLGQSTVVGIGGDPFAGQLHTDVVKRFAAD 210
>M.Javanica_Scaff4411g034476 on AAC48339 AP33-3 (Adhesin) [Trichomonas vaginalis]
Length = 255
Score = 25.4 bits (54), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 16 IASFESSEILNIIGNVFDGKLNEEEVKKLAEE 47
+A S ++ I G+ F G+L+ + VK+ A +
Sbjct: 179 LAGLGQSTVVGIGGDPFAGQLHTDVVKRFAAD 210
>M.Javanica_Scaff4411g034476 on XP_001611737 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1139
Score = 25.4 bits (54), Expect = 2.2, Method: Composition-based stats.
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 95 NEQKRICGVQNNGKSKNGDGKPEFPIL 121
N+ + CG+QN S G G P L
Sbjct: 634 NDHSKNCGLQNAAGSGTGSGSPLMAFL 660
>M.Javanica_Scaff4411g034476 on BAA96736 Cruzipain (Cysteine protease) [Trypanosoma cruzi]
Length = 70
Score = 23.9 bits (50), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 8/11 (72%), Positives = 9/11 (81%)
Query: 156 GRCGSCWAVST 166
G+CGSCWA S
Sbjct: 1 GQCGSCWAFSA 11
>M.Javanica_Scaff4411g034476 on BAA96737 Cruzipain (Cysteine protease) [Trypanosoma cruzi]
Length = 70
Score = 23.5 bits (49), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 8/11 (72%), Positives = 9/11 (81%)
Query: 156 GRCGSCWAVST 166
G+CGSCWA S
Sbjct: 1 GQCGSCWAFSA 11
>M.Javanica_Scaff4411g034476 on XP_650156 CP1 (Cysteine protease) [Entamoeba histolytica]
Length = 315
Score = 23.9 bits (50), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 152 IQNQGRCGSCWAVSTASVI 170
I++QG CGSC+ + + +
Sbjct: 109 IRDQGNCGSCYTFGSIAAL 127
>M.Javanica_Scaff4411g034476 on XP_828094 VSG (Establishment) [Trypanosoma brucei]
Length = 483
Score = 23.9 bits (50), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 9/15 (60%), Positives = 15/15 (100%)
Query: 35 KLNEEEVKKLAEEIS 49
KL++EEVKK+A+E++
Sbjct: 442 KLDKEEVKKIADEVA 456
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff27563g093902
(88 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349036 PfEMP1 (Establishment) [Plasmodium falciparum] 26 0.27
XP_845638 VSG (Establishment) [Trypanosoma brucei] 22 7.0
>M.Javanica_Scaff27563g093902 on XP_001349036 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2192
Score = 26.2 bits (56), Expect = 0.27, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
Query: 4 SGAENTTTNTLLLEYLRSQHGDLAESLFLTNDAVAAVATCF 44
+GA+ T +Y++ GDL+++ F + + +++ TC+
Sbjct: 37 NGADGTAK-----KYIKELKGDLSKATFSSEETASSIETCY 72
>M.Javanica_Scaff27563g093902 on XP_845638 VSG (Establishment) [Trypanosoma brucei]
Length = 510
Score = 21.9 bits (45), Expect = 7.0, Method: Composition-based stats.
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 39 AVATCFEKSGIVLIAGTGSACRL 61
A A C + S L+A TG+A ++
Sbjct: 317 ASAACVDMSASTLLAATGTATKI 339
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff80g001577
(338 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_807549 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.9
XP_001609166 variant erythrocyte surface antigen-1, beta subuni... 26 3.0
XP_815151 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 3.1
XP_818312 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 9.7
>M.Javanica_Scaff80g001577 on XP_807549 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 894
Score = 26.6 bits (57), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 164 VLTHPSPKCDPGEILSGDKCVTNDGEGECPDLHLC 198
+ T PSP DP + G + V DG + P + +
Sbjct: 791 IATTPSPDADPTVVTVGGETVQGDGSLQTPGVSVS 825
>M.Javanica_Scaff80g001577 on XP_001609166 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1161
Score = 26.2 bits (56), Expect = 3.0, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 8/42 (19%)
Query: 263 DECYRKACQIGERCD-------SGICLRIEGTPCRDAAKECG 297
D C + IG++CD SG C GTPC + +CG
Sbjct: 147 DCCLKGTDGIGKKCDCPSGVGASGCCSTSSGTPCHQCS-QCG 187
>M.Javanica_Scaff80g001577 on XP_815151 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 894
Score = 26.2 bits (56), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 164 VLTHPSPKCDPGEILSGDKCVTNDGEGECPDLHLC 198
+ T PSP DP + G + V DG + P + +
Sbjct: 791 IATTPSPDADPTVVTVGGETVQGDGSLQTPGVSVS 825
>M.Javanica_Scaff80g001577 on XP_818312 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 928
Score = 24.6 bits (52), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Query: 204 VSDVCAANGRVKC-PPEHACSPT 225
VS +C + G V+ PP+ ACSPT
Sbjct: 478 VSKLCPSEGAVQVTPPDTACSPT 500
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4251g033625
(275 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349738 PfEMP1 (Establishment) [Plasmodium falciparum] 29 0.30
XP_001351564 PfEMP1 (Establishment) [Plasmodium falciparum] 29 0.41
XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum] 27 1.4
XP_656181 Hgl2 (Adhesin) [Entamoeba histolytica] 27 1.6
XP_001350936 PfEMP1 (Establishment) [Plasmodium falciparum] 27 1.9
XP_628559 gp900 (Adhesin) [Cryptosporidium parvum] 26 2.3
XP_655415 Hgl (Adhesin) [Entamoeba histolytica] 25 4.1
XP_845638 VSG (Establishment) [Trypanosoma brucei] 24 9.1
AAX77225 Falcipain 2' (Cysteine protease) [Plasmodium falcipa... 24 9.1
>M.Javanica_Scaff4251g033625 on XP_001349738 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2162
Score = 29.3 bits (64), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 17/83 (20%)
Query: 75 DKGERKVFNKSEHNKEYYQKNKERLNKNSRNYYEMNKEKVLERKRN--------YREQNK 126
DK R N SEH+ + Q NK Y N +K E K N Y Q
Sbjct: 273 DKYFRNTCNDSEHSGTFSQPNK---------YCRCNGDKPGEDKANVDPPTYFDYVPQYL 323
Query: 127 EKINEYNRNYSKIHKNKLKNYRE 149
E+ ++ +I K+KLKN +E
Sbjct: 324 RWFEEWAEDFCRIRKHKLKNAKE 346
>M.Javanica_Scaff4251g033625 on XP_001351564 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2207
Score = 28.9 bits (63), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 17/83 (20%)
Query: 75 DKGERKVFNKSEHNKEYYQKNKERLNKNSRNYYEMNKEKVLERKRN--------YREQNK 126
DK R N SEH+ + Q NK Y N +K E K N Y Q
Sbjct: 273 DKYFRNTCNDSEHSGTFSQPNK---------YCRCNGDKPGEDKANVDPPTYFDYVPQYL 323
Query: 127 EKINEYNRNYSKIHKNKLKNYRE 149
E+ ++ +I K+KLKN +E
Sbjct: 324 RWFEEWAEDFCRIRKHKLKNAKE 346
>M.Javanica_Scaff4251g033625 on XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3954
Score = 26.9 bits (58), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
Query: 54 INPQSQKDKEELIPKLKNTKMDKGER-KVFNKSEHNK-----EYYQKNKERLNKNS 103
I+P++ + E + LK DK E K F K +N+ EYY KNK L KN
Sbjct: 2466 ISPRAHQLYLEPLKDLKENNTDKNELIKAFTKCAYNEGKCLYEYYSKNKATLGKNG 2521
>M.Javanica_Scaff4251g033625 on XP_656181 Hgl2 (Adhesin) [Entamoeba histolytica]
Length = 1286
Score = 26.9 bits (58), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Query: 119 RNYREQNKEKINEYNRNYSK-----IHKNKLKNYREIYYQKNKGTVLKK 162
R++ +NK+ I++YN N + +HKN + + I TV+K
Sbjct: 184 RSFNNENKDFIDQYNTNTTSKCIIDVHKNNVNTHLAIILGITDSTVIKS 232
>M.Javanica_Scaff4251g033625 on XP_001350936 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2163
Score = 26.6 bits (57), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Query: 176 EYRRKYRQKKKSQFNNNEGTSFVNPQ-----TGDFINKGKLPIVCEEEGNPNQEE 225
E + K +++ KS NN G F Q GDF+N+ K +E G NQE+
Sbjct: 1289 EQKTKCQKESKSAKGNNHGNEFCGTQGTCDTAGDFLNRLKSGPCKKENGKDNQED 1343
>M.Javanica_Scaff4251g033625 on XP_628559 gp900 (Adhesin) [Cryptosporidium parvum]
Length = 1937
Score = 26.2 bits (56), Expect = 2.3, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 189 FNNNEGTSFVNPQTGDFINKGKLPIVCEEEGNPNQEEGEYNNCEDRQNQIEVEEPNKILE 248
FN+ G V+P TG IN IV + G P E+ E N D + ++ N+++
Sbjct: 1275 FNSTTG-ELVDPSTGKPINNSTAGIVSGKPGLPPIED-ENGNLFDPSTNLPIDGNNQLVN 1332
Query: 249 EAT 251
T
Sbjct: 1333 PET 1335
>M.Javanica_Scaff4251g033625 on XP_655415 Hgl (Adhesin) [Entamoeba histolytica]
Length = 1291
Score = 25.4 bits (54), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Query: 119 RNYREQNKEKINEYNRNYSK-----IHKNKLKNYREIYYQKNKGTVLKK 162
R++ +NK I++YN N + ++KN + + I + TV+K
Sbjct: 181 RSFNTENKAFIDQYNTNTTSKCLLDVYKNNVNTHLAIIFGITDSTVIKS 229
>M.Javanica_Scaff4251g033625 on XP_845638 VSG (Establishment) [Trypanosoma brucei]
Length = 510
Score = 24.3 bits (51), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 3/67 (4%)
Query: 169 NNKEKRNEYRRKYRQKKKSQFNNNEGTSFVNPQTGDFINKGKLPIVCEEEGNPNQEEGEY 228
N+K E + K K Q G + N QT GK+ VC++E EE
Sbjct: 429 NDKATEGEKKCKLNTTKVGQAKTQAGETKGNEQTATEKCTGKVEDVCKKEAGCKWEE--- 485
Query: 229 NNCEDRQ 235
N C+D
Sbjct: 486 NKCKDSS 492
>M.Javanica_Scaff4251g033625 on AAX77225 Falcipain 2' (Cysteine protease) [Plasmodium
falciparum]
Length = 484
Score = 24.3 bits (51), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 81 VFNKSEHNKEYYQKNKERLNKNSRNYYEMNKEKVLERKRNYREQNKEKINEYNRNYSKIH 140
+ N +EH ++Y + N++ Y N+ K ER + + QN K+N +N N + ++
Sbjct: 155 LMNNAEHINQFYM----FIKTNNKQYNSPNEMK--ERFQVFL-QNAHKVNMHNNNKNSLY 207
Query: 141 KNKLKNYREIYYQ--KNKGTVLKKQK 164
K +L + ++ Y KNK L+ K
Sbjct: 208 KKELNRFADLTYHEFKNKYLSLRSSK 233
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6297g043313
(173 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff743g009500
(56 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_802467 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 2.1
XP_001219219 VSG (Establishment) [Trypanosoma brucei] 22 3.3
>M.Javanica_Scaff743g009500 on XP_802467 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 172
Score = 22.3 bits (46), Expect = 2.1, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 4/27 (14%)
Query: 29 SRTSNRVYASSP----VTTNCCLNCCA 51
S S V+AS+ VTT CC C A
Sbjct: 37 SNMSRHVFASAVLLLLVTTMCCATCGA 63
>M.Javanica_Scaff743g009500 on XP_001219219 VSG (Establishment) [Trypanosoma brucei]
Length = 463
Score = 21.9 bits (45), Expect = 3.3, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 11/29 (37%)
Query: 23 LFKCLISRTSNRVYASSPVTTNCCLNCCA 51
L ++ TS R P C N CA
Sbjct: 8 LIGIMVLSTSRRAQTEKPADDAACANLCA 36
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4511g034972
(191 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAS38514 CP65 (Cysteine protease) [Trichomonas vaginalis] 25 2.2
XP_805336 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 8.2
>M.Javanica_Scaff4511g034972 on AAS38514 CP65 (Cysteine protease) [Trichomonas vaginalis]
Length = 206
Score = 25.4 bits (54), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 149 DCLKKVDKSVNNFIMIVNQI--DEQNDALKMAVKG 181
DCL DK+V+N + +N + DE + A K++ G
Sbjct: 117 DCLFDTDKAVSNIVSYINVVEGDENDLATKISTNG 151
>M.Javanica_Scaff4511g034972 on XP_805336 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 931
Score = 23.9 bits (50), Expect = 8.2, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Query: 37 ADDRLTLSDYVALYKVVNNQSITDPKREEKLLNDMRSKGKNLSLAEDYVTLIFQDQINAS 96
DD +T S LY N+ TD K+EE + + KG ++ + V+++ +Q+
Sbjct: 415 GDDEITASSL--LY---NSGGNTDEKKEELIALYEKKKGNDVKPSPGMVSVLLTEQLQRV 469
Query: 97 K 97
K
Sbjct: 470 K 470
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3768g031072
(233 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351561 PfEMP1 (Establishment) [Plasmodium falciparum] 25 6.7
XP_001348946 PfEMP1 (Establishment) [Plasmodium falciparum] 25 6.7
>M.Javanica_Scaff3768g031072 on XP_001351561 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3553
Score = 24.6 bits (52), Expect = 6.7, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 19/50 (38%), Gaps = 4/50 (8%)
Query: 132 GMPSVNNDINKNDFFTRCGITWNYLTSTRSMSEFDDL----RRRHQVSKN 177
G P D KN F + G W + + + D RR+H + N
Sbjct: 812 GEPCTGKDKVKNGFRLKIGTPWTNIVQKKKKKSYKDFYLPPRRQHMCTSN 861
>M.Javanica_Scaff3768g031072 on XP_001348946 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3553
Score = 24.6 bits (52), Expect = 6.7, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 19/50 (38%), Gaps = 4/50 (8%)
Query: 132 GMPSVNNDINKNDFFTRCGITWNYLTSTRSMSEFDDL----RRRHQVSKN 177
G P D KN F + G W + + + D RR+H + N
Sbjct: 812 GEPCTGKDKVKNGFRLKIGTPWTNIVQKKKKKSYKDFYLPPRRQHMCTSN 861
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3356g028674
(292 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349219 PfEMP1 (Establishment) [Plasmodium falciparum] 29 0.41
Q4U925 Casein kinase II alpha (Establishment) [Theileria annu... 27 1.2
XP_818353 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.7
>M.Javanica_Scaff3356g028674 on XP_001349219 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2595
Score = 28.9 bits (63), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 26/132 (19%)
Query: 113 LNDSDVGNVKLFYYDISINQKCNEETLFSDFLRVVIIGSNRRKKREVAKNNKSLTNCTLV 172
+ND+ GN + YD + +K NE + G+N KK + LTN +
Sbjct: 2351 INDTLSGNKHIDIYDEVLKRKENE-----------LFGTNHTKKNTSTNSVAKLTNSDPI 2399
Query: 173 TTVLELGEEDATKHWQRLNAKKFNSNKQLEQLKLQIQKQ--------------LDKLHEK 218
LEL + +H + + K N N++L +LK + + + L +
Sbjct: 2400 HNQLELFHKWLDRH-RDMCEKLKNDNERLAKLKEEWENETHSGDINSGIPSGKLSDIPSD 2458
Query: 219 GLAHCDIHPDNI 230
H DIHP +I
Sbjct: 2459 NNIHSDIHPSDI 2470
>M.Javanica_Scaff3356g028674 on Q4U925 Casein kinase II alpha (Establishment) [Theileria
annulata]
Length = 348
Score = 27.3 bits (59), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 207 QIQKQLDKLHEKGLAHCDIHPDNILLFPNNGTSINAKLIDYGWSCCFNSTK 257
Q+ K ++ H +G+ H DI P N+++ ++ I +LID+G + ++ +
Sbjct: 155 QLLKAMNYCHSQGIMHRDIKPHNVMI--DHEKKI-LRLIDWGLAEFYHPEQ 202
>M.Javanica_Scaff3356g028674 on XP_818353 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 903
Score = 25.4 bits (54), Expect = 4.7, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 180 EEDATKHWQRL--NAKKFNSNKQLEQLKLQIQKQLDKLHEKGLAHCDIHPD 228
E++ T+H L N F++ +Q+ + ++L+ H KG++H I D
Sbjct: 644 EKEKTQHVVLLIRNGSHFSAYADGKQVGEDVPRELENTHSKGISHFYIGGD 694
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7144g046927
(245 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ABA06447 MSA-2a/b (Invasion) [Babesia bovis] 27 0.69
XP_804895 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.2
ABA06443 MSA-2a/b (Invasion) [Babesia bovis] 26 1.7
XP_810140 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.9
XP_816558 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.3
XP_804812 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.8
XP_816523 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 5.6
ABA06441 MSA-2a/b (Invasion) [Babesia bovis] 25 6.2
XP_810023 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 8.3
AAL15422 MSA-2a2 (Invasion) [Babesia bovis] 24 9.0
>M.Javanica_Scaff7144g046927 on ABA06447 MSA-2a/b (Invasion) [Babesia bovis]
Length = 270
Score = 27.3 bits (59), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 8/71 (11%)
Query: 168 LTALTEQEKIFIKEAEEGRKFPMEEDIDENPDYDTLQYADKKDVFKTGFTSKGVRIEKEK 227
L+A E +F G+ P E + ++ + L+Y D VFK + +GV + K K
Sbjct: 74 LSAFVEILDVF------GKGVPFETSLFDDYELGNLEYQDPDQVFK--YLLQGVTLIKTK 125
Query: 228 PKTIKIKPGDS 238
+ DS
Sbjct: 126 ISAFNVFLNDS 136
>M.Javanica_Scaff7144g046927 on XP_804895 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 787
Score = 26.9 bits (58), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 15/119 (12%)
Query: 60 EAASNGNKISKVPPTSSKAVESVKAKEGEKDKKNNSGEEKTAISAEHPFSTEDGNDSKMP 119
+AASNG I + ++ + K K+G + ++NSG A P +T D N +
Sbjct: 500 DAASNGTWIDEYLCLNATVTNATKVKDGFQLTESNSG-------AIWPVNTRDDNVRHV- 551
Query: 120 STLKSKATAFTPGTGETKTTTPTTTTPTTKLSLSKIGEQGGEKKVSAVLTALTEQEKIF 178
S + FT T P+ +TP L + GE + + TA + E +F
Sbjct: 552 ----SLSHNFTLVASVTIEKAPSNSTP---LLGAIWGETNSTHTMGILYTADKKWETMF 603
>M.Javanica_Scaff7144g046927 on ABA06443 MSA-2a/b (Invasion) [Babesia bovis]
Length = 270
Score = 26.2 bits (56), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 8/71 (11%)
Query: 168 LTALTEQEKIFIKEAEEGRKFPMEEDIDENPDYDTLQYADKKDVFKTGFTSKGVRIEKEK 227
L+A E +F G+ P E + ++ + L+Y D VFK + +GV + K K
Sbjct: 74 LSAFVEILDVF------GKGVPFETSLFDDYELGNLEYQDPDQVFK--YLLQGVTLIKTK 125
Query: 228 PKTIKIKPGDS 238
+ D+
Sbjct: 126 ISAFNVFLNDN 136
>M.Javanica_Scaff7144g046927 on XP_810140 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 923
Score = 26.2 bits (56), Expect = 1.9, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 42 EEAMPKQEEKQ--KSAETKKEAASNGNKISKVPPTSSKAVESVKAKEGEKDKKNNSGEEK 99
EE P + E + K AE++ E S+ P + + A+EG D+ ++
Sbjct: 758 EEPKPAESESEEPKPAESESEEPKPVESESEEPKPAEPNAATSSAREGTADQPASATSSS 817
Query: 100 TAISAEHPFSTEDG 113
AI+ FS++D
Sbjct: 818 AAITDFGAFSSDDA 831
>M.Javanica_Scaff7144g046927 on XP_816558 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 813
Score = 25.0 bits (53), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 207 DKKDVFKTGFTSKGVRIEKEKPKTI 231
D+KD F TG SK + + E PK +
Sbjct: 120 DEKDYFFTGIASKLLELSDENPKKL 144
>M.Javanica_Scaff7144g046927 on XP_804812 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 506
Score = 25.0 bits (53), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Query: 94 NSGEEKTAISAEHPFSTEDGNDSKMPSTLKSKATAFTPGTGETKTTTPTTTTPTTKLSLS 153
++G A + HP S E N S PS S A A+ + +T +T + +
Sbjct: 115 SAGGVIAAFAEGHPSSKESNNASSEPS---SDAVAWYIDSAWDWSTLVAEVKKSTWQAHT 171
Query: 154 KIGEQGGEKKVSAVL--TALTEQEKIFI 179
+G+ G ++ VL T T+ K+F+
Sbjct: 172 VLGKADGTERFDVVLRPTTTTKDNKVFL 199
>M.Javanica_Scaff7144g046927 on XP_816523 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 892
Score = 25.0 bits (53), Expect = 5.6, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Query: 90 DKKNNSGEEKTAISAEH--PFSTEDGNDSKMPSTLKSKATAFTPGTGETKTTTPTTTTP 146
D +S T S+ H P +T D + PST + TP T + T +TP
Sbjct: 730 DSSAHSTPSTTVDSSAHSTPSTTVDSSAHSTPSTPVDSSAHSTPSTTADSSAHSTPSTP 788
Score = 24.6 bits (52), Expect = 6.4, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Query: 90 DKKNNSGEEKTAISAEH--PFSTEDGNDSKMPSTLKSKATAFTPGTGETKTTTPTTTTP 146
D +S TA S+ H P + D + PST + TP T + T +TP
Sbjct: 766 DSSAHSTPSTTADSSAHSTPSTPADSSAHSTPSTPVDSSAHSTPSTPADSSAHSTPSTP 824
>M.Javanica_Scaff7144g046927 on ABA06441 MSA-2a/b (Invasion) [Babesia bovis]
Length = 278
Score = 24.6 bits (52), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 187 KFPMEEDIDENPDYDTLQYADKKDVFKT 214
K P + + +N YD L+Y D ++FK+
Sbjct: 87 KVPFKTPLFDNGVYDNLKYQDTDEIFKS 114
>M.Javanica_Scaff7144g046927 on XP_810023 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 804
Score = 24.3 bits (51), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 67 KISKVPPTSSK--AVESVKAKEGEKDKKNNSGEEKTAI 102
I + P S A S+ K GE NN+GEE A+
Sbjct: 364 HIVDIGPVSDDDVAASSLLYKSGESGNDNNNGEELIAL 401
>M.Javanica_Scaff7144g046927 on AAL15422 MSA-2a2 (Invasion) [Babesia bovis]
Length = 292
Score = 23.9 bits (50), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 187 KFPMEEDIDENPDYDTLQYADKKDVFKT 214
K P + + +N +D L+Y D ++FK+
Sbjct: 87 KVPFKTSLFDNSVFDNLKYQDTDEIFKS 114
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff8240g051214
(76 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_803373 VSG (Establishment) [Trypanosoma brucei] 22 4.1
ABR92030 MSA-1 (Invasion) [Babesia bovis] 22 5.2
>M.Javanica_Scaff8240g051214 on XP_803373 VSG (Establishment) [Trypanosoma brucei]
Length = 499
Score = 22.3 bits (46), Expect = 4.1, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 23 SELISEIAKKAFDLELNSGNFIYGNQHIAD 52
S++ S + KAF N+G ++ GN A+
Sbjct: 259 SQVESVLGNKAFTGHTNNGRYVLGNGAAAN 288
>M.Javanica_Scaff8240g051214 on ABR92030 MSA-1 (Invasion) [Babesia bovis]
Length = 328
Score = 21.9 bits (45), Expect = 5.2, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Query: 14 ILQNINFVSSELISEIAKKAFDLELNSGNFIYGNQHIADAILKMLTPFYPFQRFM 68
+++N +SSEL E A K+F + + F I D++ M +F+
Sbjct: 97 MIKNNPMISSELFKETAAKSFLSKTDEDKF----NAIFDSLKSMFVRINHMDKFL 147
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff421g006094
(173 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_829766 VSG (Establishment) [Trypanosoma brucei] 30 0.078
>M.Javanica_Scaff421g006094 on XP_829766 VSG (Establishment) [Trypanosoma brucei]
Length = 490
Score = 29.6 bits (65), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 10/51 (19%)
Query: 36 GCVSYMGQIEHMPGNSENIPWKKNTSGAAHLILKKSIEGLNRVTLIFEDKT 86
GC+ Y G P +IPW K GA HL+L R I E+KT
Sbjct: 300 GCILYKGL---GPNGIHDIPWVKKLEGAQHLLLL-------RYQAIREEKT 340
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff25135g090434
(148 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_819216 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 7.1
AAA69859 ROP1 (Establishment) [Toxoplasma gondii] 23 8.8
>M.Javanica_Scaff25135g090434 on XP_819216 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 482
Score = 23.5 bits (49), Expect = 7.1, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 116 RRRPIGDFVSFDSSRRTLSNEVLY 139
R RP+G D RT++N +L+
Sbjct: 376 RARPVGPISMDDDRERTVANRLLH 399
>M.Javanica_Scaff25135g090434 on AAA69859 ROP1 (Establishment) [Toxoplasma gondii]
Length = 255
Score = 23.1 bits (48), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 61 GICGDFAATEAPNTSRAREIGIGLCYEPRPSARRLPARRVPQNPAR 106
GI G F + P+ + A + YEP PS P R Q PAR
Sbjct: 51 GIRGTFHMSVKPH-ANADDFASDDNYEPLPSFVEAPVRGPDQVPAR 95
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff26911g093022
(59 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001348165 RESA (Others) [plasmodium falciparum] 24 0.64
>M.Javanica_Scaff26911g093022 on XP_001348165 RESA (Others) [plasmodium falciparum]
Length = 1085
Score = 23.9 bits (50), Expect = 0.64, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 20 IEAEEESFYSLLGVEQDADLLTIRKAFKSLALEKHP 55
IE + +Y +LGV +AD+ I + + LA +P
Sbjct: 517 IEIPDTLYYDILGVGVNADMNEITERYFKLAENYYP 552
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5083g037743
(188 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_821904 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.22
XP_818689 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.89
XP_820757 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.7
XP_820027 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.9
XP_808800 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.0
XP_820017 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.1
XP_817865 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.2
XP_821293 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.3
XP_816823 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.7
XP_815315 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.5
XP_808719 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.5
XP_821294 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.7
XP_807798 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.8
XP_820393 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 5.1
XP_816821 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.2
XP_816720 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.3
XP_808836 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.9
XP_812701 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 7.8
XP_815511 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 8.0
XP_821902 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 9.9
>M.Javanica_Scaff5083g037743 on XP_821904 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 851
Score = 28.5 bits (62), Expect = 0.22, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 125 EYWIGLVYGSPTFEDGTQVDQEVFWQIADRVPWAHPSTLKGYICKAVADADAGV 178
E+ + L G+ TF+DG + ++W D +P + + GY+ + + +GV
Sbjct: 214 EWGLLLARGNVTFDDGD--GKRIYWTDVDALPISSNTEQYGYVTELLGSGGSGV 265
>M.Javanica_Scaff5083g037743 on XP_818689 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 844
Score = 26.9 bits (58), Expect = 0.89, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 20/50 (40%)
Query: 129 GLVYGSPTFEDGTQVDQEVFWQIADRVPWAHPSTLKGYICKAVADADAGV 178
GLV D Q D+ ++W +PW + + + + +GV
Sbjct: 221 GLVLVKGNVSDENQKDKRIYWDDTYAIPWTYKGNQHKSLVRLIGGGGSGV 270
>M.Javanica_Scaff5083g037743 on XP_820757 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 912
Score = 25.8 bits (55), Expect = 1.7, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 130 LVYGSPTFEDGTQVDQEVFWQIADRVPWAHPSTLKGYICKAVADADAGV 178
LV G+ + +DG + ++W +PW+H K + + V +GV
Sbjct: 217 LVKGNVSKKDGEK--NRIYWSDNYVIPWSHKDNQKEPLKRLVGSGGSGV 263
>M.Javanica_Scaff5083g037743 on XP_820027 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 377
Score = 25.8 bits (55), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/57 (22%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Query: 127 WIGLVYGSPTFEDGTQVDQEVFWQIADRVPWAHPSTLKGYICKAVADADAGVFEYKD 183
W LV DG+ ++++W A +PW + + + +GV + KD
Sbjct: 177 WGLLVAVGNVSNDGSSGKKKIYWNDASVIPWTDSEKQHKSLTRLIGSGGSGV-QMKD 232
>M.Javanica_Scaff5083g037743 on XP_808800 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 776
Score = 25.8 bits (55), Expect = 2.0, Method: Composition-based stats.
Identities = 7/40 (17%), Positives = 20/40 (50%)
Query: 139 DGTQVDQEVFWQIADRVPWAHPSTLKGYICKAVADADAGV 178
DG+ + ++W+ A +PW + ++ + + +G+
Sbjct: 228 DGSSGKKYIYWEDASVIPWTEFEKQQEFLTRLIGGGGSGI 267
>M.Javanica_Scaff5083g037743 on XP_820017 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 779
Score = 25.8 bits (55), Expect = 2.1, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Query: 127 WIGLVYGSPTFEDGTQVDQEVFWQIADRVPWAHPSTLKGYICKAVADADAGVFEYKD 183
W LV DG+ ++++W A +PW + + + +GV + KD
Sbjct: 215 WGLLVAVGNVSNDGSSGKKKIYWNDASVIPWTDSEKQHKSLTRLIGSGGSGV-QMKD 270
>M.Javanica_Scaff5083g037743 on XP_817865 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 786
Score = 25.4 bits (54), Expect = 2.2, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Query: 127 WIGLVYGSPTFEDGTQVDQEVFWQIADRVPWAHPSTLKGYICKAVADADAGVFEYKD 183
W LV DG+ ++++W A +PW + + + +GV + KD
Sbjct: 216 WGLLVAVGNVSNDGSSGKKKIYWNDASVIPWTDSEKRHESLTRLIGSGGSGV-QMKD 271
>M.Javanica_Scaff5083g037743 on XP_821293 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 786
Score = 25.4 bits (54), Expect = 2.3, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 21/52 (40%)
Query: 127 WIGLVYGSPTFEDGTQVDQEVFWQIADRVPWAHPSTLKGYICKAVADADAGV 178
W LV DG+ ++++W A +PW + + + +GV
Sbjct: 215 WGLLVAVGNVSNDGSSDKKKIYWNDASVIPWTDSEKRHESLTRLIGSGGSGV 266
>M.Javanica_Scaff5083g037743 on XP_816823 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 772
Score = 25.4 bits (54), Expect = 2.7, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
Query: 105 FTSVHSLREFKFITDNFDLKEYWIGLVYGSPTFEDGTQVDQEVFWQIADRVPWAHPSTLK 164
F +S EF D W LV DG+ ++++W A +PW +
Sbjct: 192 FAGTYSF-EFTEGVDQTAAAAKWGLLVAVGNVSNDGSSDKKKIYWNDASVIPWTYFEKRH 250
Query: 165 GYICKAVADADAGV 178
+ + + +GV
Sbjct: 251 ESLTRLIGGGGSGV 264
>M.Javanica_Scaff5083g037743 on XP_815315 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 799
Score = 25.0 bits (53), Expect = 3.5, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 127 WIGLVYGSPTFEDGTQVDQEVFWQIADRVPW 157
W LV DG+ D++++W A +PW
Sbjct: 216 WGLLVASGKVCNDGSS-DKKIYWNDASVIPW 245
>M.Javanica_Scaff5083g037743 on XP_808719 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 779
Score = 24.6 bits (52), Expect = 4.5, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 127 WIGLVYGSPTFEDGTQVDQEVFWQIADRVPW 157
W LV DG+ ++++W+ A +PW
Sbjct: 215 WELLVAVGNVSNDGSSGKKKIYWKDASVIPW 245
>M.Javanica_Scaff5083g037743 on XP_821294 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 776
Score = 24.6 bits (52), Expect = 4.7, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 127 WIGLVYGSPTFEDGTQVDQEVFWQIADRVPWAH 159
W LV DG+ ++++W A +PW +
Sbjct: 213 WGLLVAVGNVSNDGSSDKKKIYWNDASVIPWTY 245
>M.Javanica_Scaff5083g037743 on XP_807798 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 875
Score = 24.6 bits (52), Expect = 4.8, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 127 WIGLVYGSPTFEDGTQVDQEVFWQIADRVPW 157
W LV DG+ ++++W+ A +PW
Sbjct: 213 WELLVAVGNVSNDGSNGKKKIYWKDASVIPW 243
>M.Javanica_Scaff5083g037743 on XP_820393 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 836
Score = 24.6 bits (52), Expect = 5.1, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 127 WIGLVYGSPTFEDGTQVDQEVFWQIADRVPW 157
W LV DG+ ++++W+ A +PW
Sbjct: 275 WGLLVAVGNVSNDGSSGKKKIYWKDASVIPW 305
>M.Javanica_Scaff5083g037743 on XP_816821 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 782
Score = 24.3 bits (51), Expect = 5.2, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 127 WIGLVYGSPTFEDGTQVDQEVFWQIADRVPW 157
W LV DG+ ++++W A +PW
Sbjct: 215 WGLLVASGKVSNDGSSDKKKIYWNDAYVIPW 245
>M.Javanica_Scaff5083g037743 on XP_816720 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 782
Score = 24.3 bits (51), Expect = 5.3, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 127 WIGLVYGSPTFEDGTQVDQEVFWQIADRVPW 157
W LV DG+ ++++W+ A +PW
Sbjct: 220 WGLLVAVGNVSNDGSSGKKKIYWKDASVIPW 250
>M.Javanica_Scaff5083g037743 on XP_808836 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 376
Score = 24.3 bits (51), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 127 WIGLVYGSPTFEDGTQVDQEVFWQIADRVPWAH 159
W LV DG+ ++++W+ A +PW
Sbjct: 218 WGLLVAVGNVSNDGSSGKKKIYWKDASVIPWTE 250
>M.Javanica_Scaff5083g037743 on XP_812701 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 804
Score = 23.9 bits (50), Expect = 7.8, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 130 LVYGSPTFEDGTQVDQEVFWQIADRVPWAHPSTLKGYICKAVADADAGV 178
L G+ + +DG + ++ ++W D +P + GY+ + +GV
Sbjct: 215 LARGNVSVDDGDR-NKRIYWTDVDALPITSNTEQYGYVTVLLGSGGSGV 262
>M.Javanica_Scaff5083g037743 on XP_815511 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 848
Score = 23.9 bits (50), Expect = 8.0, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 119 DNFDLKEYWIGLVYGSPTFEDGTQVDQEVFWQIADRVPWAHPSTLKGYICKAVADADAGV 178
+N+ + + LV G + E+ Q D+ ++W +PW + + + + +GV
Sbjct: 211 ENYQAVGWGLMLVKGHVSGEN--QNDKRIYWNDTYAIPWTYKGNQHSILKRLIGGGGSGV 268
>M.Javanica_Scaff5083g037743 on XP_821902 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 854
Score = 23.5 bits (49), Expect = 9.9, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 125 EYWIGLVYGSPTFEDGTQVDQEVFWQIADRVPWAHPSTLKGYICKAVADADAGV 178
E+ + L G+ + DG ++ ++W D +P + GY+ + + +GV
Sbjct: 214 EWGLLLARGNVSVVDGR--NKRIYWTDVDALPITSNTEQYGYVTELLGSGGSGV 265
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff678g008818
(229 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_805038 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 7.7
>M.Javanica_Scaff678g008818 on XP_805038 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 927
Score = 24.3 bits (51), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 22/54 (40%)
Query: 52 TTPKPYVPPPPVYAPPPAPPAPPAYAPPPSPPAPPTYAPPPPPSPPPAYAPPPP 105
T +P VPPP P + PS APPT A P P PA + P
Sbjct: 718 TNTQPTVPPPATAGPQQTDQTTLNTSSVPSGGAPPTPAEPKSEEPKPAESRPEE 771
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4080g032770
(225 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_820382 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.8
>M.Javanica_Scaff4080g032770 on XP_820382 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 729
Score = 25.0 bits (53), Expect = 3.8, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 24/63 (38%)
Query: 127 KWDKTLIASARNTVVPEHKRLPYDWIRHSSNGSGYKEDEIVRALWKLREYLVEDTTGIKR 186
KWD + V+ P +W++ S KE I L+E+L +G+
Sbjct: 215 KWDNLGLKLVVGDVMEPTSSEPREWVKWGEISSPLKESTIAAHEGNLKEFLAAGGSGVLM 274
Query: 187 NQG 189
G
Sbjct: 275 EDG 277
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff595g007982
(57 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349036 PfEMP1 (Establishment) [Plasmodium falciparum] 23 1.9
BAC44837 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 21 5.8
>M.Javanica_Scaff595g007982 on XP_001349036 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2192
Score = 22.7 bits (47), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 9/14 (64%), Positives = 10/14 (71%)
Query: 2 FVDELLNHGYCDLN 15
F EL NHGY D+N
Sbjct: 439 FYGELKNHGYGDVN 452
>M.Javanica_Scaff595g007982 on BAC44837 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 1566
Score = 21.2 bits (43), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 38 ISYCLNINKYGRNHVFLRK 56
+S LNI KYGR +L +
Sbjct: 98 VSSFLNIKKYGRKGEYLNR 116
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff30403g097464
(117 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAW78163 TRAP (Invasion) [Plasmodium falciparum] 32 0.004
AAW78133 TRAP (Invasion) [Plasmodium falciparum] 32 0.004
AAW78141 TRAP (Invasion) [Plasmodium falciparum] 32 0.004
AAW78153 TRAP (Invasion) [Plasmodium falciparum] 32 0.004
XP_001351221 CTRP (Adhesin) [Plasmodium falciparum] 32 0.008
AAA29778 TRAP (Invasion) [Plasmodium falciparum] 31 0.009
AAW78130 TRAP (Invasion) [Plasmodium falciparum] 31 0.009
AAW78146 TRAP (Invasion) [Plasmodium falciparum] 31 0.009
AAW78154 TRAP (Invasion) [Plasmodium falciparum] 31 0.009
AAQ11892 TRAP (Invasion) [Plasmodium falciparum] 31 0.009
AAA29772 TRAP (Invasion) [Plasmodium falciparum] 31 0.009
AAW78159 TRAP (Invasion) [Plasmodium falciparum] 31 0.009
AAW78172 TRAP (Invasion) [Plasmodium falciparum] 31 0.009
AAA29775 TRAP (Invasion) [Plasmodium falciparum] 31 0.009
AAW78158 TRAP (Invasion) [Plasmodium falciparum] 31 0.009
AAW78173 TRAP (Invasion) [Plasmodium falciparum] 31 0.009
AAW78167 TRAP (Invasion) [Plasmodium falciparum] 31 0.009
AAW78137 TRAP (Invasion) [Plasmodium falciparum] 31 0.010
AAA29773 TRAP (Invasion) [Plasmodium falciparum] 31 0.010
AAW78150 TRAP (Invasion) [Plasmodium falciparum] 31 0.010
AAW78168 TRAP (Invasion) [Plasmodium falciparum] 31 0.010
AAW78149 TRAP (Invasion) [Plasmodium falciparum] 31 0.010
AAW78166 TRAP (Invasion) [Plasmodium falciparum] 31 0.010
AAQ11894 TRAP (Invasion) [Plasmodium falciparum] 31 0.010
AAW78132 TRAP (Invasion) [Plasmodium falciparum] 31 0.010
AAW78174 TRAP (Invasion) [Plasmodium falciparum] 31 0.010
AAW78139 TRAP (Invasion) [Plasmodium falciparum] 31 0.010
AAW78151 TRAP (Invasion) [Plasmodium falciparum] 31 0.010
AAW78134 TRAP (Invasion) [Plasmodium falciparum] 31 0.010
AAW78171 TRAP (Invasion) [Plasmodium falciparum] 31 0.010
AAW78131 TRAP (Invasion) [Plasmodium falciparum] 31 0.010
AAW78160 TRAP (Invasion) [Plasmodium falciparum] 31 0.010
AAW78164 TRAP (Invasion) [Plasmodium falciparum] 31 0.010
AAQ11891 TRAP (Invasion) [Plasmodium falciparum] 31 0.010
AAA29774 TRAP (Invasion) [Plasmodium falciparum] 31 0.010
AAA29776 TRAP (Invasion) [Plasmodium falciparum] 31 0.010
AAW78165 TRAP (Invasion) [Plasmodium falciparum] 31 0.010
AAW78144 TRAP (Invasion) [Plasmodium falciparum] 31 0.010
AAW78169 TRAP (Invasion) [Plasmodium falciparum] 31 0.010
AAQ11895 TRAP (Invasion) [Plasmodium falciparum] 31 0.010
AAA29771 TRAP (Invasion) [Plasmodium falciparum] 31 0.010
AAW78156 TRAP (Invasion) [Plasmodium falciparum] 31 0.010
AAW78161 TRAP (Invasion) [Plasmodium falciparum] 31 0.010
AAW78176 TRAP (Invasion) [Plasmodium falciparum] 31 0.010
AAW78157 TRAP (Invasion) [Plasmodium falciparum] 31 0.010
AAA29770 TRAP (Invasion) [Plasmodium falciparum] 31 0.010
AAW78148 TRAP (Invasion) [Plasmodium falciparum] 31 0.010
AAW78136 TRAP (Invasion) [Plasmodium falciparum] 31 0.010
AAW78177 TRAP (Invasion) [Plasmodium falciparum] 31 0.010
AAA29777 TRAP (Invasion) [Plasmodium falciparum] 31 0.010
AAW78162 TRAP (Invasion) [Plasmodium falciparum] 31 0.011
AAW78175 TRAP (Invasion) [Plasmodium falciparum] 31 0.011
AAW78138 TRAP (Invasion) [Plasmodium falciparum] 31 0.011
AAW78152 TRAP (Invasion) [Plasmodium falciparum] 31 0.011
AAW78135 TRAP (Invasion) [Plasmodium falciparum] 30 0.018
AAW78147 TRAP (Invasion) [Plasmodium falciparum] 30 0.018
AAW59565 CSP (Invasion) [Plasmodium falciparum] 28 0.11
AAM19072 CSP (Invasion) [Plasmodium falciparum] 26 0.22
AAA29545 CSP (Invasion) [Plasmodium falciparum] 27 0.23
AAA29552 CSP (Invasion) [Plasmodium falciparum] 27 0.23
AAN87580 CSP (Invasion) [Plasmodium falciparum] 27 0.23
AAW78216 CSP (Invasion) [Plasmodium falciparum] 27 0.23
AAW78211 CSP (Invasion) [Plasmodium falciparum] 27 0.23
BAD73952 CSP (Invasion) [Plasmodium falciparum] 27 0.24
AAW78202 CSP (Invasion) [Plasmodium falciparum] 27 0.24
AAW78179 CSP (Invasion) [Plasmodium falciparum] 27 0.24
AAW78219 CSP (Invasion) [Plasmodium falciparum] 27 0.24
AAN87613 CSP (Invasion) [Plasmodium falciparum] 27 0.24
AAA29550 CSP (Invasion) [Plasmodium falciparum] 27 0.24
ABB59596 CSP (Invasion) [Plasmodium falciparum] 26 0.24
BAD73953 CSP (Invasion) [Plasmodium falciparum] 27 0.24
AAA29569 CSP (Invasion) [Plasmodium falciparum] 27 0.25
ABB59592 CSP (Invasion) [Plasmodium falciparum] 26 0.25
ABB59597 CSP (Invasion) [Plasmodium falciparum] 26 0.25
ABB59599 CSP (Invasion) [Plasmodium falciparum] 26 0.25
ABB59604 CSP (Invasion) [Plasmodium falciparum] 26 0.25
ABB59605 CSP (Invasion) [Plasmodium falciparum] 26 0.25
AAA29573 CSP (Invasion) [Plasmodium falciparum] 27 0.25
ABB59590 CSP (Invasion) [Plasmodium falciparum] 26 0.26
ABB59603 CSP (Invasion) [Plasmodium falciparum] 26 0.26
ABB59611 CSP (Invasion) [Plasmodium falciparum] 26 0.26
ABB59591 CSP (Invasion) [Plasmodium falciparum] 26 0.26
ABB59593 CSP (Invasion) [Plasmodium falciparum] 26 0.26
ABB59606 CSP (Invasion) [Plasmodium falciparum] 26 0.26
AAA29571 CSP (Invasion) [Plasmodium falciparum] 27 0.26
AAG37074 CSP (Invasion) [Plasmodium falciparum] 27 0.26
AAN87592 CSP (Invasion) [Plasmodium falciparum] 27 0.26
ABB59612 CSP (Invasion) [Plasmodium falciparum] 26 0.26
AAA29551 CSP (Invasion) [Plasmodium falciparum] 27 0.27
BAD73956 CSP (Invasion) [Plasmodium falciparum] 27 0.27
ABB59601 CSP (Invasion) [Plasmodium falciparum] 26 0.27
ABB59607 CSP (Invasion) [Plasmodium falciparum] 26 0.27
AAA29554 CSP (Invasion) [Plasmodium falciparum] 27 0.27
AAA63422 CSP (Invasion) [Plasmodium falciparum] 27 0.27
BAD73955 CSP (Invasion) [Plasmodium falciparum] 27 0.27
ABB59594 CSP (Invasion) [Plasmodium falciparum] 26 0.27
ABB59609 CSP (Invasion) [Plasmodium falciparum] 26 0.27
AAN87607 CSP (Invasion) [Plasmodium falciparum] 27 0.27
AAA29575 CSP (Invasion) [Plasmodium falciparum] 26 0.28
ABB59608 CSP (Invasion) [Plasmodium falciparum] 26 0.28
>M.Javanica_Scaff30403g097464 on AAW78163 TRAP (Invasion) [Plasmodium falciparum]
Length = 565
Score = 32.3 bits (72), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 83 WSECSTSCGPGIRSRQVECMAK 104
WS CS +CG G RSR+ E + K
Sbjct: 250 WSPCSVTCGKGTRSRKREILHK 271
>M.Javanica_Scaff30403g097464 on AAW78133 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 32.3 bits (72), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 83 WSECSTSCGPGIRSRQVECMAK 104
WS CS +CG G RSR+ E + K
Sbjct: 250 WSPCSVTCGKGTRSRKREILHK 271
>M.Javanica_Scaff30403g097464 on AAW78141 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 32.3 bits (72), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 83 WSECSTSCGPGIRSRQVECMAK 104
WS CS +CG G RSR+ E + K
Sbjct: 250 WSPCSVTCGKGTRSRKREILHK 271
>M.Javanica_Scaff30403g097464 on AAW78153 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 32.3 bits (72), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 83 WSECSTSCGPGIRSRQVECMAK 104
WS CS +CG G RSR+ E + K
Sbjct: 250 WSPCSVTCGKGTRSRKREILHK 271
>M.Javanica_Scaff30403g097464 on XP_001351221 CTRP (Adhesin) [Plasmodium falciparum]
Length = 2112
Score = 31.6 bits (70), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 12/17 (70%), Positives = 13/17 (76%)
Query: 81 GGWSECSTSCGPGIRSR 97
G WSECS +CG GIR R
Sbjct: 1599 GEWSECSATCGEGIRVR 1615
Score = 25.4 bits (54), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 83 WSECSTSCGPGIRSRQVECMAKQI 106
WS CS +CG RSR + + I
Sbjct: 1661 WSSCSKTCGYSTRSRTFTILPEYI 1684
Score = 24.6 bits (52), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Query: 48 LIEEQQRITSYSEEREEENEINEKNGNKPRFYVGGWSECSTSCGPGIRSRQ 98
+ EE+ R E +EE+ KN P WSEC +C G+R R
Sbjct: 1778 ICEEEVRHYLDKVEYDEESTCENKN---PCGDWSDWSECDRTCNVGVRIRH 1825
Score = 23.5 bits (49), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 9/19 (47%), Positives = 13/19 (68%), Gaps = 3/19 (15%)
Query: 83 WSECSTSCGPG---IRSRQ 98
W +CS++CG G IR R+
Sbjct: 1943 WGDCSSTCGEGSFKIRKRK 1961
>M.Javanica_Scaff30403g097464 on AAA29778 TRAP (Invasion) [Plasmodium falciparum]
Length = 562
Score = 31.2 bits (69), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 83 WSECSTSCGPGIRSRQVECM 102
WS CS +CG G RSR+ E +
Sbjct: 250 WSPCSVTCGKGTRSRKREIL 269
>M.Javanica_Scaff30403g097464 on AAW78130 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 31.2 bits (69), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 83 WSECSTSCGPGIRSRQVECM 102
WS CS +CG G RSR+ E +
Sbjct: 250 WSPCSVTCGKGTRSRKREIL 269
>M.Javanica_Scaff30403g097464 on AAW78146 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 31.2 bits (69), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 83 WSECSTSCGPGIRSRQVECM 102
WS CS +CG G RSR+ E +
Sbjct: 250 WSPCSVTCGKGTRSRKREIL 269
>M.Javanica_Scaff30403g097464 on AAW78154 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 31.2 bits (69), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 83 WSECSTSCGPGIRSRQVECM 102
WS CS +CG G RSR+ E +
Sbjct: 250 WSPCSVTCGKGTRSRKREIL 269
>M.Javanica_Scaff30403g097464 on AAQ11892 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 31.2 bits (69), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 83 WSECSTSCGPGIRSRQVECM 102
WS CS +CG G RSR+ E +
Sbjct: 250 WSPCSVTCGKGTRSRKREIL 269
>M.Javanica_Scaff30403g097464 on AAA29772 TRAP (Invasion) [Plasmodium falciparum]
Length = 565
Score = 31.2 bits (69), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 83 WSECSTSCGPGIRSRQVECM 102
WS CS +CG G RSR+ E +
Sbjct: 250 WSPCSVTCGKGTRSRKREIL 269
>M.Javanica_Scaff30403g097464 on AAW78159 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 31.2 bits (69), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 83 WSECSTSCGPGIRSRQVECM 102
WS CS +CG G RSR+ E +
Sbjct: 250 WSPCSVTCGKGTRSRKREIL 269
>M.Javanica_Scaff30403g097464 on AAW78172 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 31.2 bits (69), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 83 WSECSTSCGPGIRSRQVECM 102
WS CS +CG G RSR+ E +
Sbjct: 250 WSPCSVTCGKGTRSRKREIL 269
>M.Javanica_Scaff30403g097464 on AAA29775 TRAP (Invasion) [Plasmodium falciparum]
Length = 574
Score = 31.2 bits (69), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 83 WSECSTSCGPGIRSRQVECM 102
WS CS +CG G RSR+ E +
Sbjct: 250 WSPCSVTCGKGTRSRKREIL 269
>M.Javanica_Scaff30403g097464 on AAW78158 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 31.2 bits (69), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 83 WSECSTSCGPGIRSRQVECM 102
WS CS +CG G RSR+ E +
Sbjct: 250 WSPCSVTCGKGTRSRKREIL 269
>M.Javanica_Scaff30403g097464 on AAW78173 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 31.2 bits (69), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 83 WSECSTSCGPGIRSRQVECM 102
WS CS +CG G RSR+ E +
Sbjct: 250 WSPCSVTCGKGTRSRKREIL 269
>M.Javanica_Scaff30403g097464 on AAW78167 TRAP (Invasion) [Plasmodium falciparum]
Length = 575
Score = 31.2 bits (69), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 83 WSECSTSCGPGIRSRQVECM 102
WS CS +CG G RSR+ E +
Sbjct: 250 WSPCSVTCGKGTRSRKREIL 269
>M.Javanica_Scaff30403g097464 on AAW78137 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 31.2 bits (69), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 83 WSECSTSCGPGIRSRQVECM 102
WS CS +CG G RSR+ E +
Sbjct: 250 WSPCSVTCGKGTRSRKREIL 269
>M.Javanica_Scaff30403g097464 on AAA29773 TRAP (Invasion) [Plasmodium falciparum]
Length = 568
Score = 31.2 bits (69), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 83 WSECSTSCGPGIRSRQVECM 102
WS CS +CG G RSR+ E +
Sbjct: 250 WSPCSVTCGKGTRSRKREIL 269
>M.Javanica_Scaff30403g097464 on AAW78150 TRAP (Invasion) [Plasmodium falciparum]
Length = 569
Score = 31.2 bits (69), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 83 WSECSTSCGPGIRSRQVECM 102
WS CS +CG G RSR+ E +
Sbjct: 250 WSPCSVTCGKGTRSRKREIL 269
>M.Javanica_Scaff30403g097464 on AAW78168 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 31.2 bits (69), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 83 WSECSTSCGPGIRSRQVECM 102
WS CS +CG G RSR+ E +
Sbjct: 250 WSPCSVTCGKGTRSRKREIL 269
>M.Javanica_Scaff30403g097464 on AAW78149 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 31.2 bits (69), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 83 WSECSTSCGPGIRSRQVECM 102
WS CS +CG G RSR+ E +
Sbjct: 250 WSPCSVTCGKGTRSRKREIL 269
>M.Javanica_Scaff30403g097464 on AAW78166 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 31.2 bits (69), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 83 WSECSTSCGPGIRSRQVECM 102
WS CS +CG G RSR+ E +
Sbjct: 250 WSPCSVTCGKGTRSRKREIL 269
>M.Javanica_Scaff30403g097464 on AAQ11894 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 31.2 bits (69), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 83 WSECSTSCGPGIRSRQVECM 102
WS CS +CG G RSR+ E +
Sbjct: 250 WSPCSVTCGKGTRSRKREIL 269
>M.Javanica_Scaff30403g097464 on AAW78132 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 31.2 bits (69), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 83 WSECSTSCGPGIRSRQVECM 102
WS CS +CG G RSR+ E +
Sbjct: 250 WSPCSVTCGKGTRSRKREIL 269
>M.Javanica_Scaff30403g097464 on AAW78174 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 31.2 bits (69), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 83 WSECSTSCGPGIRSRQVECM 102
WS CS +CG G RSR+ E +
Sbjct: 250 WSPCSVTCGKGTRSRKREIL 269
>M.Javanica_Scaff30403g097464 on AAW78139 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 31.2 bits (69), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 83 WSECSTSCGPGIRSRQVECM 102
WS CS +CG G RSR+ E +
Sbjct: 250 WSPCSVTCGKGTRSRKREIL 269
>M.Javanica_Scaff30403g097464 on AAW78151 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 31.2 bits (69), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 83 WSECSTSCGPGIRSRQVECM 102
WS CS +CG G RSR+ E +
Sbjct: 250 WSPCSVTCGKGTRSRKREIL 269
>M.Javanica_Scaff30403g097464 on AAW78134 TRAP (Invasion) [Plasmodium falciparum]
Length = 551
Score = 31.2 bits (69), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 83 WSECSTSCGPGIRSRQVECM 102
WS CS +CG G RSR+ E +
Sbjct: 250 WSPCSVTCGKGTRSRKREIL 269
>M.Javanica_Scaff30403g097464 on AAW78171 TRAP (Invasion) [Plasmodium falciparum]
Length = 551
Score = 31.2 bits (69), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 83 WSECSTSCGPGIRSRQVECM 102
WS CS +CG G RSR+ E +
Sbjct: 250 WSPCSVTCGKGTRSRKREIL 269
>M.Javanica_Scaff30403g097464 on AAW78131 TRAP (Invasion) [Plasmodium falciparum]
Length = 557
Score = 31.2 bits (69), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 83 WSECSTSCGPGIRSRQVECM 102
WS CS +CG G RSR+ E +
Sbjct: 250 WSPCSVTCGKGTRSRKREIL 269
>M.Javanica_Scaff30403g097464 on AAW78160 TRAP (Invasion) [Plasmodium falciparum]
Length = 557
Score = 31.2 bits (69), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 83 WSECSTSCGPGIRSRQVECM 102
WS CS +CG G RSR+ E +
Sbjct: 250 WSPCSVTCGKGTRSRKREIL 269
>M.Javanica_Scaff30403g097464 on AAW78164 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 31.2 bits (69), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 83 WSECSTSCGPGIRSRQVECM 102
WS CS +CG G RSR+ E +
Sbjct: 250 WSPCSVTCGKGTRSRKREIL 269
>M.Javanica_Scaff30403g097464 on AAQ11891 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 31.2 bits (69), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 83 WSECSTSCGPGIRSRQVECM 102
WS CS +CG G RSR+ E +
Sbjct: 250 WSPCSVTCGKGTRSRKREIL 269
>M.Javanica_Scaff30403g097464 on AAA29774 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 31.2 bits (69), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 83 WSECSTSCGPGIRSRQVECM 102
WS CS +CG G RSR+ E +
Sbjct: 250 WSPCSVTCGKGTRSRKREIL 269
>M.Javanica_Scaff30403g097464 on AAA29776 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 31.2 bits (69), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 83 WSECSTSCGPGIRSRQVECM 102
WS CS +CG G RSR+ E +
Sbjct: 250 WSPCSVTCGKGTRSRKREIL 269
>M.Javanica_Scaff30403g097464 on AAW78165 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 31.2 bits (69), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 83 WSECSTSCGPGIRSRQVECM 102
WS CS +CG G RSR+ E +
Sbjct: 250 WSPCSVTCGKGTRSRKREIL 269
>M.Javanica_Scaff30403g097464 on AAW78144 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 31.2 bits (69), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 83 WSECSTSCGPGIRSRQVECM 102
WS CS +CG G RSR+ E +
Sbjct: 250 WSPCSVTCGKGTRSRKREIL 269
>M.Javanica_Scaff30403g097464 on AAW78169 TRAP (Invasion) [Plasmodium falciparum]
Length = 551
Score = 31.2 bits (69), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 83 WSECSTSCGPGIRSRQVECM 102
WS CS +CG G RSR+ E +
Sbjct: 250 WSPCSVTCGKGTRSRKREIL 269
>M.Javanica_Scaff30403g097464 on AAQ11895 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 31.2 bits (69), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 83 WSECSTSCGPGIRSRQVECM 102
WS CS +CG G RSR+ E +
Sbjct: 250 WSPCSVTCGKGTRSRKREIL 269
>M.Javanica_Scaff30403g097464 on AAA29771 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 31.2 bits (69), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 83 WSECSTSCGPGIRSRQVECM 102
WS CS +CG G RSR+ E +
Sbjct: 250 WSPCSVTCGKGTRSRKREIL 269
>M.Javanica_Scaff30403g097464 on AAW78156 TRAP (Invasion) [Plasmodium falciparum]
Length = 581
Score = 31.2 bits (69), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 83 WSECSTSCGPGIRSRQVECM 102
WS CS +CG G RSR+ E +
Sbjct: 250 WSPCSVTCGKGTRSRKREIL 269
>M.Javanica_Scaff30403g097464 on AAW78161 TRAP (Invasion) [Plasmodium falciparum]
Length = 554
Score = 31.2 bits (69), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 83 WSECSTSCGPGIRSRQVECM 102
WS CS +CG G RSR+ E +
Sbjct: 250 WSPCSVTCGKGTRSRKREIL 269
>M.Javanica_Scaff30403g097464 on AAW78176 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 31.2 bits (69), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 83 WSECSTSCGPGIRSRQVECM 102
WS CS +CG G RSR+ E +
Sbjct: 250 WSPCSVTCGKGTRSRKREIL 269
>M.Javanica_Scaff30403g097464 on AAW78157 TRAP (Invasion) [Plasmodium falciparum]
Length = 557
Score = 31.2 bits (69), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 83 WSECSTSCGPGIRSRQVECM 102
WS CS +CG G RSR+ E +
Sbjct: 250 WSPCSVTCGKGTRSRKREIL 269
>M.Javanica_Scaff30403g097464 on AAA29770 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 31.2 bits (69), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 83 WSECSTSCGPGIRSRQVECM 102
WS CS +CG G RSR+ E +
Sbjct: 250 WSPCSVTCGKGTRSRKREIL 269
>M.Javanica_Scaff30403g097464 on AAW78148 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 31.2 bits (69), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 83 WSECSTSCGPGIRSRQVECM 102
WS CS +CG G RSR+ E +
Sbjct: 250 WSPCSVTCGKGTRSRKREIL 269
>M.Javanica_Scaff30403g097464 on AAW78136 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 31.2 bits (69), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 83 WSECSTSCGPGIRSRQVECM 102
WS CS +CG G RSR+ E +
Sbjct: 250 WSPCSVTCGKGTRSRKREIL 269
>M.Javanica_Scaff30403g097464 on AAW78177 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 31.2 bits (69), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 83 WSECSTSCGPGIRSRQVECM 102
WS CS +CG G RSR+ E +
Sbjct: 250 WSPCSVTCGKGTRSRKREIL 269
>M.Javanica_Scaff30403g097464 on AAA29777 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 31.2 bits (69), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 83 WSECSTSCGPGIRSRQVECM 102
WS CS +CG G RSR+ E +
Sbjct: 250 WSPCSVTCGKGTRSRKREIL 269
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff82g001600
(178 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349031 PfEMP1 (Establishment) [Plasmodium falciparum] 27 0.88
XP_001611366 variant erythrocyte surface antigen-1, beta subuni... 25 2.1
AAY44829 MSA-1 (Invasion) [Babesia bovis] 23 8.2
AAY44834 MSA-1 (Invasion) [Babesia bovis] 23 8.3
AAY44830 MSA-1 (Invasion) [Babesia bovis] 23 8.7
ABR92032 MSA-1 (Invasion) [Babesia bovis] 23 8.7
ABR92025 MSA-1 (Invasion) [Babesia bovis] 23 9.3
ABR92033 MSA-1 (Invasion) [Babesia bovis] 23 9.8
>M.Javanica_Scaff82g001600 on XP_001349031 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2275
Score = 26.6 bits (57), Expect = 0.88, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 99 EAQQHPSRRHRLPTPPPGTSQPPQQNPPRVEGRSPRHDDQ 138
EAQ+ +R + PPP S Q PP SPR D +
Sbjct: 807 EAQKCLEKRKQ-TCPPPEESPDRSQTPPASRSDSPRVDQK 845
>M.Javanica_Scaff82g001600 on XP_001611366 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1173
Score = 25.4 bits (54), Expect = 2.1, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 12/57 (21%)
Query: 67 PPSQE------TPQPIQQTPHQVEEEAEAEAHPVP--WHLEAQQHPSRRHRLPTPPP 115
PP +E TP ++ PH+ E PVP W + + H + PT PP
Sbjct: 725 PPIEEHMNKIVTPSGQEKGPHK----HYPELCPVPMGWSTDKENHFKGTSQYPTVPP 777
>M.Javanica_Scaff82g001600 on AAY44829 MSA-1 (Invasion) [Babesia bovis]
Length = 318
Score = 23.5 bits (49), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 43 RGRHRGHLSPQAEQNPNTII 62
RGRH GH E NP+ +
Sbjct: 206 RGRHYGHAEDYVEPNPDATL 225
>M.Javanica_Scaff82g001600 on AAY44834 MSA-1 (Invasion) [Babesia bovis]
Length = 320
Score = 23.5 bits (49), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 43 RGRHRGHLSPQAEQNPNTII 62
RGRH GH E NP+ +
Sbjct: 206 RGRHYGHAEDYVEPNPDATL 225
>M.Javanica_Scaff82g001600 on AAY44830 MSA-1 (Invasion) [Babesia bovis]
Length = 322
Score = 23.5 bits (49), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 43 RGRHRGHLSPQAEQNPNTII 62
RGRH GH E NP+ +
Sbjct: 206 RGRHYGHAEDYVEPNPDATL 225
>M.Javanica_Scaff82g001600 on ABR92032 MSA-1 (Invasion) [Babesia bovis]
Length = 319
Score = 23.5 bits (49), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 30/82 (36%), Gaps = 22/82 (26%)
Query: 101 QQHPSRRHRLPTPPPGTSQPPQQNPPRVEGRSPR---------HDDQNQELQWQQG---- 147
+Q P+R P PG + QQ PP G SP+ + + LQ QQG
Sbjct: 239 EQKPARSESTGVPAPGDASGVQQ-PP-ASGTSPQGPAPTTPSPSPESSGNLQGQQGTTKP 296
Query: 148 -------GGLTMHEWQPLPLPP 162
GGLT+ L
Sbjct: 297 AGSSFTYGGLTVATLCYFVLSA 318
>M.Javanica_Scaff82g001600 on ABR92025 MSA-1 (Invasion) [Babesia bovis]
Length = 319
Score = 23.5 bits (49), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 30/82 (36%), Gaps = 22/82 (26%)
Query: 101 QQHPSRRHRLPTPPPGTSQPPQQNPPRVEGRSPR---------HDDQNQELQWQQG---- 147
+Q P+R P PG + QQ PP G SP+ + + LQ QQG
Sbjct: 239 EQKPARSESTEVPAPGDASGVQQ-PP-ASGTSPQGPAPTTPSPSPESSGNLQGQQGTTKP 296
Query: 148 -------GGLTMHEWQPLPLPP 162
GGLT+ L
Sbjct: 297 AGSSFTYGGLTVATLCYFVLSA 318
>M.Javanica_Scaff82g001600 on ABR92033 MSA-1 (Invasion) [Babesia bovis]
Length = 319
Score = 23.1 bits (48), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 30/82 (36%), Gaps = 22/82 (26%)
Query: 101 QQHPSRRHRLPTPPPGTSQPPQQNPPRVEGRSPR---------HDDQNQELQWQQG---- 147
+Q P+R P PG + QQ PP G SP+ + + LQ QQG
Sbjct: 239 EQKPARSESTEVPAPGDASGVQQ-PP-ASGTSPQGPAPTTPSPSPESSGNLQGQQGTTKP 296
Query: 148 -------GGLTMHEWQPLPLPP 162
GGLT+ L
Sbjct: 297 AGSSFTYGGLTVATLCYFVLSA 318
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5795g041088
(224 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum] 32 0.040
>M.Javanica_Scaff5795g041088 on XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3346
Score = 31.6 bits (70), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Query: 99 ISILHPPGQDKLSGESAAERWNPAHG---VRSILLSVISMLNEPNISSPANVDASVSYRK 155
I+IL P G K+ E E+W HG + +L ++ + L+E + D S
Sbjct: 1361 INILFPNGVRKIPNEKTREKWWTDHGPEIWKGMLCALTNGLSESEKKTKIFDDYSHDKVN 1420
Query: 156 YKENGNKEFPDIIKK 170
+NGN D KK
Sbjct: 1421 QSKNGNPSLEDFAKK 1435
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7587g048681
(114 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5304g038836
(134 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_843646 VSG (Establishment) [Trypanosoma brucei] 24 3.1
XP_001350415 PfEMP1 (Establishment) [Plasmodium falciparum] 23 9.3
>M.Javanica_Scaff5304g038836 on XP_843646 VSG (Establishment) [Trypanosoma brucei]
Length = 526
Score = 24.3 bits (51), Expect = 3.1, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 73 DVDQRMKEIFDEKNAEEIPEDWFI--VRGPKPDKRNKKGSSSH 113
D D ++E + A ++PEDW KR+ KG +H
Sbjct: 80 DTDGNVQEWTKAQQAGKLPEDWATEWPAWAAAAKRSAKGGETH 122
>M.Javanica_Scaff5304g038836 on XP_001350415 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3056
Score = 23.1 bits (48), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)
Query: 68 DNYQQDVDQRMKEIFDEKNAEEIP-----EDWF 95
D Y + +D ++ EIFD N +I DW+
Sbjct: 1692 DEYTKYIDSKLNEIFDSSNKNDIETKRARTDWW 1724
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff27741g094146
(148 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_843649 VSG (Establishment) [Trypanosoma brucei] 25 2.2
XP_001349033 PfEMP1 (Establishment) [Plasmodium falciparum] 24 5.2
XP_001350415 PfEMP1 (Establishment) [Plasmodium falciparum] 24 6.2
>M.Javanica_Scaff27741g094146 on XP_843649 VSG (Establishment) [Trypanosoma brucei]
Length = 509
Score = 25.0 bits (53), Expect = 2.2, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 56 SKHTLKYSKEFQNRKKKIGEYSGGKFSNSNLSICRSLILPRDRRGTVSRAG 106
+ +KY+K ++KK+G S G ++LSI S I+ + + +A
Sbjct: 368 ANQDVKYTKAGNEQEKKLGALSKG----ADLSIALSFIINKRHESQLQKAA 414
>M.Javanica_Scaff27741g094146 on XP_001349033 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2064
Score = 23.9 bits (50), Expect = 5.2, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Query: 45 PSPYNWLEQLESKHTLKYSKEFQNRKKKIGEYSGGKFSNSNLSICRSLILPRDRRGTVSR 104
P W E+ + K K+ QN +K + S + + N C++ I D T+S+
Sbjct: 295 PQYLRWFEEWAEEFCRKRKKKLQNAQKFCRDESSKLYCSLNGYDCKATIRANDEY-TISQ 353
Query: 105 A 105
A
Sbjct: 354 A 354
>M.Javanica_Scaff27741g094146 on XP_001350415 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3056
Score = 23.9 bits (50), Expect = 6.2, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 45 PSPYNWLEQLESKHTLKYSKEFQNRKKKIGEYSGGKFSNSNLSI 88
P WLE+ ++ KY+K F++ K G + N +I
Sbjct: 1788 PQFIRWLEEWTNEFCEKYTKYFEDMKSNCNLRKGADDCDDNSNI 1831
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2606g024064
(174 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_812613 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.8
XP_001609533 variant erythrocyte surface antigen-1, alpha subun... 24 4.8
XP_803953 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 6.0
XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum] 24 7.5
>M.Javanica_Scaff2606g024064 on XP_812613 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1038
Score = 25.8 bits (55), Expect = 1.8, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 72 RKRESGASALLTAVSTKSGIKRIGEEKNHCNNPH 105
RK+E G + VS + G+K+I + H NP
Sbjct: 199 RKKERGLLLVKGTVSDEGGMKKIRWNETHVVNPQ 232
>M.Javanica_Scaff2606g024064 on XP_001609533 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1162
Score = 24.3 bits (51), Expect = 4.8, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Query: 115 IIGDLVGT-RNAIHSELRAKLGGNYIINCAHT--PSFAYSGDSVIDYCVDG 162
++GD+ G R I + R K N ++ C HT PS D +C G
Sbjct: 944 VLGDVFGFFRGGIGEKERGKNKKNLVVPCDHTKDPSKKGDDDYFCGWCASG 994
>M.Javanica_Scaff2606g024064 on XP_803953 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1027
Score = 24.3 bits (51), Expect = 6.0, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 5/46 (10%)
Query: 63 PPSCGCCGRRKRESGASALLTAVSTKSGIKRIGEEKNHCNNPHIKR 108
PP G K E G + V+ + G K+I + H NP KR
Sbjct: 200 PPVGG-----KNEPGLLLVRGTVADEGGTKKIKWNETHVVNPQGKR 240
>M.Javanica_Scaff2606g024064 on XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3954
Score = 23.9 bits (50), Expect = 7.5, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
Query: 61 CPPPSCGCCGRRKR---ESGASALLT--AVSTKSGIKRIGEEKNHCNNP 104
CP SC C +R + E + AL T ++ +S K E K C P
Sbjct: 1640 CPDGSCSCMEQRSQQHNEDSSDALETHNSIMPQSLDKEPKEVKGRCKCP 1688
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2703g024692
(214 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_628559 gp900 (Adhesin) [Cryptosporidium parvum] 28 0.43
ABO31335 PP2C (Establishment) [Toxoplasma gondii] 24 6.4
XP_001610713 variant erythrocyte surface antigen-1, alpha subun... 24 8.2
XP_001350413 PfEMP1 (Establishment) [Plasmodium falciparum] 24 8.5
>M.Javanica_Scaff2703g024692 on XP_628559 gp900 (Adhesin) [Cryptosporidium parvum]
Length = 1937
Score = 28.1 bits (61), Expect = 0.43, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 29 PGSHSGWINFGEGSVSQPAGMNQGEGPSGPGSKQPMNLD 67
PGSHSG+IN G S + G+ P P + P + D
Sbjct: 1520 PGSHSGFINGTSGEQSHEKDPSTGK-PLDPNTGLPFDED 1557
>M.Javanica_Scaff2703g024692 on ABO31335 PP2C (Establishment) [Toxoplasma gondii]
Length = 255
Score = 24.3 bits (51), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 166 QHEIIEDRKKIYNHLNEAERKHRHAEASRRYRKRRRDLRAGNHESGSN 213
+H + + + N+LN+ R E +R++ + DLRA N GS+
Sbjct: 135 RHSAMWLAQNVMNYLNDL-RDVNEEEITRQFERMDGDLRAANLPGGSS 181
>M.Javanica_Scaff2703g024692 on XP_001610713 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1294
Score = 24.3 bits (51), Expect = 8.2, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 55 PSGPGSKQPMNLDKEIHKLLQVV---GDSEAHPEIRRRQLKNQGNVQEIRN-IGEQYQNL 110
P G G M + + K+ +VV G+++ E ++++ ++ ++ +GE + L
Sbjct: 632 PLGSGESVAMKVKTLLEKIGEVVVQLGNAQEALEGKKKEA-----IEGVKGALGEAKREL 686
Query: 111 DIEYNELQGEFENVFQEIKDKHKAAI 136
+ N L G+ E +KDK + A+
Sbjct: 687 EGAKNGLNGKLEEAKDGLKDKLQDAM 712
>M.Javanica_Scaff2703g024692 on XP_001350413 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2860
Score = 24.3 bits (51), Expect = 8.5, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 112 IEYNELQGEFENVFQEIKDKHKAAINSRIRPETLNEISSE------IDKLVTRLQKIQAE 165
+E+N ++ ++E + ++H + + + L I I+K+ LQK +
Sbjct: 633 VEWNTMKEQYEKQPDLVNNRHFTTLEWFLEGQFLKTIEKAYGNEDAIEKIQEFLQKKSKQ 692
Query: 166 QHEIIEDRKKIYNHLNEAE 184
+ + I+D++ I + L E E
Sbjct: 693 EDDEIKDKRDIIDILLEHE 711
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4583g035323
(181 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349438 PfEMP1 (Establishment) [Plasmodium falciparum] 25 4.3
XP_806401 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 9.8
XP_816389 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 9.9
>M.Javanica_Scaff4583g035323 on XP_001349438 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2265
Score = 24.6 bits (52), Expect = 4.3, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 7/36 (19%)
Query: 137 LFELLKKCRNHENYGE-------VHDCIHSKRPKNM 165
L + ++KCR + YG+ +DC +KR +NM
Sbjct: 339 LNDAIQKCRGEDKYGKDRYCDLNGYDCEKTKRGRNM 374
>M.Javanica_Scaff4583g035323 on XP_806401 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 863
Score = 23.5 bits (49), Expect = 9.8, Method: Composition-based stats.
Identities = 12/45 (26%), Positives = 19/45 (42%)
Query: 34 NDKTSIVRKCCPKEKIRHHRRPLHCCQDGLFRDEVDGYLLKECAD 78
N+ V K CP E + P C + D + G+L + +D
Sbjct: 542 NEVDKRVSKLCPSENAKEDPSPATACGAAIPTDGLVGFLSGKFSD 586
>M.Javanica_Scaff4583g035323 on XP_816389 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 920
Score = 23.5 bits (49), Expect = 9.9, Method: Composition-based stats.
Identities = 12/45 (26%), Positives = 19/45 (42%)
Query: 34 NDKTSIVRKCCPKEKIRHHRRPLHCCQDGLFRDEVDGYLLKECAD 78
N+ V K CP E + P C + D + G+L + +D
Sbjct: 471 NEVDKRVSKLCPSENAKEDPSPATACGAAIPTDGLVGFLSGKFSD 515
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2768g025103
(197 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_827749 VSG (Establishment) [Trypanosoma brucei] 26 1.6
ABR92030 MSA-1 (Invasion) [Babesia bovis] 24 5.4
>M.Javanica_Scaff2768g025103 on XP_827749 VSG (Establishment) [Trypanosoma brucei]
Length = 516
Score = 26.2 bits (56), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 44 PDMVEEKSEGIKQQKHFNYQTE 65
P VEEK +GIK++K Q E
Sbjct: 446 PKQVEEKDDGIKEEKCAGKQQE 467
>M.Javanica_Scaff2768g025103 on ABR92030 MSA-1 (Invasion) [Babesia bovis]
Length = 328
Score = 24.3 bits (51), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 62 YQTEGLVENNEPCVNNNVVKNDFAKSVTSKNERRRISGGINGAFAALRSLI 112
Y+ +++NN P +++ + K AKS SK + + N F +L+S+
Sbjct: 92 YKVRDMIKNN-PMISSELFKETAAKSFLSKTDEDK----FNAIFDSLKSMF 137
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7292g047490
(167 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350413 PfEMP1 (Establishment) [Plasmodium falciparum] 26 1.6
XP_001350796 PfEMP1 (Establishment) [Plasmodium falciparum] 23 8.9
>M.Javanica_Scaff7292g047490 on XP_001350413 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2860
Score = 25.8 bits (55), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 20/46 (43%)
Query: 1 MKYLFLLFFLFLLLNKIIGLNNNSENTKKQNIFDRIFNRHGHNLKN 46
MKY F + I NNN K Q +F I++ + H L N
Sbjct: 1794 MKYSFADLGDIIRGRDIYIGNNNQIENKLQQVFKNIYDSNKHKLSN 1839
>M.Javanica_Scaff7292g047490 on XP_001350796 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2646
Score = 23.5 bits (49), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 17 IIGLNNNSENTKKQNIFDRIFNRHGHNLKNKTKEFEDTKTKCV 59
I+ N +N KKQ F+ F+ +L N + E+ D KC+
Sbjct: 584 ILEKTNGDKNGKKQKTFNDFFHFWVRHLLNDSIEWRDKLKKCI 626
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6640g044829
(200 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609041 variant erythrocyte surface antigen-1, alpha subun... 26 1.9
>M.Javanica_Scaff6640g044829 on XP_001609041 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1318
Score = 25.8 bits (55), Expect = 1.9, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 14 TLILHLPQHPYYNNNQQQQQFYGGYRPTP 42
T++L P N Q Q FY RP P
Sbjct: 500 TVVLKTPNEATSTNEQPQLMFYQDKRPHP 528
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2805g025331
(569 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff535g007326
(80 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_814753 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.7
XP_820670 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.7
XP_651378 Lgl4 (Adhesin) [Entamoeba histolytica] 23 1.7
XP_821669 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.4
XP_001351439 PfEMP1 (Establishment) [Plasmodium falciparum] 22 7.9
XP_001351438 PfEMP1 (Establishment) [Plasmodium falciparum] 22 8.0
XP_001351437 PfEMP1 (Establishment) [Plasmodium falciparum] 22 8.7
XP_001349035 PfEMP1 (Establishment) [Plasmodium falciparum] 22 9.5
>M.Javanica_Scaff535g007326 on XP_814753 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 882
Score = 23.5 bits (49), Expect = 1.7, Method: Composition-based stats.
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 20 IVCSANNEQHNSLLETKTQ 38
++C N +H+S ET+TQ
Sbjct: 617 VLCGGENTEHSSNWETETQ 635
>M.Javanica_Scaff535g007326 on XP_820670 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 883
Score = 23.5 bits (49), Expect = 1.7, Method: Composition-based stats.
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 20 IVCSANNEQHNSLLETKTQ 38
++C N +H+S ET+TQ
Sbjct: 618 VLCGGENTEHSSNWETETQ 636
>M.Javanica_Scaff535g007326 on XP_651378 Lgl4 (Adhesin) [Entamoeba histolytica]
Length = 271
Score = 23.5 bits (49), Expect = 1.7, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 60 KRSDSNFLGGFDVSFSKYSI 79
K +++NF FD S+SKY +
Sbjct: 30 KNTNANFNVAFDSSYSKYQV 49
>M.Javanica_Scaff535g007326 on XP_821669 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 879
Score = 22.3 bits (46), Expect = 5.4, Method: Composition-based stats.
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 26 NEQHNSLLETKTQNN 40
N++H+S LETKT +
Sbjct: 612 NKEHSSYLETKTSKH 626
>M.Javanica_Scaff535g007326 on XP_001351439 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2326
Score = 21.9 bits (45), Expect = 7.9, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 33 LETKTQNNNPREMDKRHLFSLYSILNDKRS 62
+++ T NN+ DK L+S ++ND S
Sbjct: 2060 MDSLTSNNHSPYNDKNDLYSGIDLINDALS 2089
>M.Javanica_Scaff535g007326 on XP_001351438 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2312
Score = 21.6 bits (44), Expect = 8.0, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 33 LETKTQNNNPREMDKRHLFSLYSILNDKRS 62
+++ T NN+ DK L+S ++ND S
Sbjct: 2046 MDSLTSNNHSPYNDKNDLYSGIDLINDALS 2075
>M.Javanica_Scaff535g007326 on XP_001351437 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2277
Score = 21.6 bits (44), Expect = 8.7, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 33 LETKTQNNNPREMDKRHLFSLYSILNDKRS 62
+++ T NN+ DK L+S ++ND S
Sbjct: 2042 MDSLTSNNHSPYNDKNDLYSGIDLINDALS 2071
>M.Javanica_Scaff535g007326 on XP_001349035 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2239
Score = 21.6 bits (44), Expect = 9.5, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 33 LETKTQNNNPREMDKRHLFSLYSILNDKRS 62
+++ T NN+ DK L+S ++ND S
Sbjct: 1975 MDSLTSNNHSPYNDKNDLYSGIDLINDALS 2004
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4778g036261
(70 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAX07967 alpha-10 giardin (Others) [Giardia duodenalis] 23 2.1
XP_818859 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.8
>M.Javanica_Scaff4778g036261 on AAX07967 alpha-10 giardin (Others) [Giardia duodenalis]
Length = 255
Score = 22.7 bits (47), Expect = 2.1, Method: Composition-based stats.
Identities = 6/18 (33%), Positives = 13/18 (72%)
Query: 38 FCRLDPFRSLLYLTYTPW 55
+C+ PF+SL+ + + P+
Sbjct: 89 YCKKGPFQSLMSMAWEPY 106
>M.Javanica_Scaff4778g036261 on XP_818859 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 867
Score = 21.9 bits (45), Expect = 4.8, Method: Composition-based stats.
Identities = 8/20 (40%), Positives = 11/20 (55%), Gaps = 1/20 (5%)
Query: 44 FRSLLYLTYTPWSVCC-CGG 62
F S + L + W +CC CG
Sbjct: 44 FTSTVLLLFLVWMICCDCGA 63
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7612g048780
(400 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351513 PfEMP1 (Establishment) [Plasmodium falciparum] 25 8.0
>M.Javanica_Scaff7612g048780 on XP_001351513 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2152
Score = 25.4 bits (54), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 16/77 (20%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 263 CEHGGFKCLQQLD----ILLHKFGVNAYFCGHDHNLQHIKIEKENLDKNNIEEEKEEETF 318
C GF C + ++ + + K + +F + + + I+ +KE DK + ++E + +
Sbjct: 355 CSRNGFDCEKTVNARGKVRMGKGCTDCFFACNPY-IDWIEKQKEQFDKQKQKYDEEIKKY 413
Query: 319 VNYIVSGAASRSDRSAK 335
S + R+ R+A+
Sbjct: 414 TKVASSSSGGRAKRAAR 430
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2727g024838
(616 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_812550 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.88
XP_821991 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 1.0
XP_813642 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 1.6
XP_821693 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.8
XP_804542 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 3.7
XP_819146 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 4.3
XP_821425 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 5.3
XP_807166 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 7.8
>M.Javanica_Scaff2727g024838 on XP_812550 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 795
Score = 28.9 bits (63), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 7/57 (12%)
Query: 175 LGELQYERRCKFAKLCSTSLPAPPKSVYAPTFSYAVNTQMQDPWEGVSNGTKFLVYI 231
L EL Y+ + K+ LCS KS +A Y V +Q NGT+ VY+
Sbjct: 612 LMELSYDSQNKWRVLCSDGTTKKLKSTWATETQYQVAIVLQ-------NGTQGSVYV 661
>M.Javanica_Scaff2727g024838 on XP_821991 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 882
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 8/80 (10%)
Query: 165 EMEKGNSNYYLGELQYERRCKFAKLCSTSLPAPPKSVYAPTFSYAVNTQMQDPWEGVSNG 224
++ GN+N L L Y + K+ LC S + P Y V +Q NG
Sbjct: 594 KINDGNNNPVLLGLSYNSQNKWQVLCIGGNTKDLSSTWEPQTQYQVAIVLQ-------NG 646
Query: 225 TKFLVYIFERNPEKGLPFSL 244
T+ VYI + E G+ F L
Sbjct: 647 TQGSVYIDGKRLE-GVLFDL 665
>M.Javanica_Scaff2727g024838 on XP_813642 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 872
Score = 28.1 bits (61), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 7/63 (11%)
Query: 169 GNSNYYLGELQYERRCKFAKLCSTSLPAPPKSVYAPTFSYAVNTQMQDPWEGVSNGTKFL 228
G+ N L L Y+ K+ LC P P S + Y V ++ NGT+
Sbjct: 601 GDGNSVLLGLSYDSERKWHVLCCDKTPKEPSSTWETETQYQVAIVLK-------NGTQGS 653
Query: 229 VYI 231
VY+
Sbjct: 654 VYV 656
>M.Javanica_Scaff2727g024838 on XP_821693 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 834
Score = 27.3 bits (59), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 7/57 (12%)
Query: 175 LGELQYERRCKFAKLCSTSLPAPPKSVYAPTFSYAVNTQMQDPWEGVSNGTKFLVYI 231
L EL Y+ K+ LCS KS + P Y V +Q NGT+ Y+
Sbjct: 629 LMELSYDSEKKWRVLCSDGTTKRLKSTWEPQTQYQVAIVLQ-------NGTQGSAYV 678
>M.Javanica_Scaff2727g024838 on XP_804542 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 813
Score = 26.9 bits (58), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 24/56 (42%)
Query: 165 EMEKGNSNYYLGELQYERRCKFAKLCSTSLPAPPKSVYAPTFSYAVNTQMQDPWEG 220
++ G+ N L L Y + K+ LC A S + P Y V +Q+ +G
Sbjct: 621 KVNDGDKNTVLLGLSYNKERKWQALCCDGTTAEHSSTWDPQRQYQVAIVLQNEKQG 676
>M.Javanica_Scaff2727g024838 on XP_819146 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 825
Score = 26.9 bits (58), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 7/67 (10%)
Query: 165 EMEKGNSNYYLGELQYERRCKFAKLCSTSLPAPPKSVYAPTFSYAVNTQMQDPWEGVSNG 224
+M + N L L Y+R +A LCS + + P Y V + +NG
Sbjct: 585 KMNDDSENTVLLGLSYKREGNWAVLCSGQTTKKHSNTWEPQTQYQVAIVL-------NNG 637
Query: 225 TKFLVYI 231
T+ VY+
Sbjct: 638 TQGSVYV 644
>M.Javanica_Scaff2727g024838 on XP_821425 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 787
Score = 26.6 bits (57), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 175 LGELQYERRCKFAKLCSTSLPAPPKSVYAPTFSYAVNTQMQDPWEG 220
L EL Y+ + K+ LCS KS +A Y V+ +Q+ +G
Sbjct: 605 LMELSYDSQSKWRLLCSDGTTKRLKSTWATEKQYQVSIVLQNGKQG 650
>M.Javanica_Scaff2727g024838 on XP_807166 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 801
Score = 26.2 bits (56), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 175 LGELQYERRCKFAKLCSTSLPAPPKSVYAPTFSYAVNTQMQDPWEG 220
L EL Y+ + K+ LCS KS +A Y V+ +Q+ +G
Sbjct: 619 LMELSYDSQRKWRLLCSDGTTKRLKSTWATETQYQVSIVLQNGKQG 664
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2949g026241
(100 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609602 SBP2 (Others) [Babesia bovis] 25 1.4
XP_806381 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.6
ABA06450 MSA-2a1 (Invasion) [Babesia bovis] 23 2.7
AAL15421 MSA-2a1 (Invasion) [Babesia bovis] 23 2.7
>M.Javanica_Scaff2949g026241 on XP_001609602 SBP2 (Others) [Babesia bovis]
Length = 2248
Score = 24.6 bits (52), Expect = 1.4, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 27 VDVKIIDDWEEKREFIYLKKFEIKERFVLESRKIISKIVLRYNNFIEKEKNYYKT-SILN 85
VDV I D E+ + F + E+K R V+ I+ R + +E + Y T S+L
Sbjct: 71 VDVIIGHDLEDHKNFRTPQYAELKRRDVVREMFYFDLILQRLPIDVAQEASEYATFSMLP 130
Query: 86 ESLVKNSKL 94
+ L + K+
Sbjct: 131 DDLARKVKI 139
>M.Javanica_Scaff2949g026241 on XP_806381 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1045
Score = 24.3 bits (51), Expect = 1.6, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 28 DVKIIDDWEEKREFIYLKKFEIKERFVLESRKIISKIVLRYN 69
+VK++DDWE R + + + + V R+ I RYN
Sbjct: 617 NVKLVDDWEPNRTYQVVLRMDCHYWTVFVDREEIHN--KRYN 656
>M.Javanica_Scaff2949g026241 on ABA06450 MSA-2a1 (Invasion) [Babesia bovis]
Length = 316
Score = 23.5 bits (49), Expect = 2.7, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
Query: 69 NNFIE-----KEKNYYKTSILNESLVKNSKLNSIEE 99
N F+E KEK +KTS+ + S+ N K +E
Sbjct: 75 NAFVEILDSFKEKVPFKTSLFDNSVFDNLKYQDTDE 110
>M.Javanica_Scaff2949g026241 on AAL15421 MSA-2a1 (Invasion) [Babesia bovis]
Length = 316
Score = 23.5 bits (49), Expect = 2.7, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
Query: 69 NNFIE-----KEKNYYKTSILNESLVKNSKLNSIEE 99
N F+E KEK +KTS+ + S+ N K +E
Sbjct: 75 NAFVEILDSFKEKVPFKTSLFDNSVFDNLKYQDTDE 110
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff30430g097499
(288 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_809719 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.4
XP_001350797 PfEMP1 (Establishment) [Plasmodium falciparum] 25 6.7
>M.Javanica_Scaff30430g097499 on XP_809719 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 844
Score = 25.0 bits (53), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query: 109 RATQPNQMVRETGSQMLRATQPNQMVRETGSQMVRATQPNQMVRETGSQMI 159
+A +P ++V++ ++ TQ + V TG + V +QP +V+E M+
Sbjct: 128 KANEPEEVVKD-----VKDTQFLKEVTSTGEKEVDVSQPTTVVKENDIYML 173
>M.Javanica_Scaff30430g097499 on XP_001350797 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2287
Score = 25.0 bits (53), Expect = 6.7, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 25/60 (41%)
Query: 40 VVADTQANQMASDVSQVIIGTQTNQTDREIVSQMISGLQTNQMASEIASEMRHATQPNQM 99
VV + N + TQ + + I S I+ + NQ+ + S M + QPN +
Sbjct: 1904 VVLEPSGNNTTASGKNTPSDTQNDIQNDGIPSSKITDNEWNQLKDDFISNMLQSEQPNDI 1963
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff787g009898
(143 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum] 29 0.11
XP_001351561 PfEMP1 (Establishment) [Plasmodium falciparum] 24 5.1
XP_001348946 PfEMP1 (Establishment) [Plasmodium falciparum] 24 5.1
>M.Javanica_Scaff787g009898 on XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2980
Score = 28.9 bits (63), Expect = 0.11, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 12/80 (15%)
Query: 44 DVDGSEFAIFQLLAEQYEQLPVTVCQMNIELHHQPFYGSFFIRHRFFRNFDWFIRHGRFA 103
D++ + +Q+ YE + CQM H P +G FF FD ++++
Sbjct: 535 DINNGKVKNYQIWQCYYENSEINKCQMTPSSHKVPKHGYIM---SFFAFFDLWVKN---- 587
Query: 104 LMKTDSIN----VTDLINVT 119
+ D+IN +T+ IN T
Sbjct: 588 -LLIDTINWKNELTNCINNT 606
>M.Javanica_Scaff787g009898 on XP_001351561 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3553
Score = 23.9 bits (50), Expect = 5.1, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 12/64 (18%)
Query: 60 YEQLPVTVCQMNIELHHQPFYGSFFIRHRFFRNFDWFIRHGRFALMKTDSIN----VTDL 115
Y+ + CQM H P +G F+ FD ++++ + DSIN +T+
Sbjct: 554 YKSSEINKCQMTPSSHKVPKHGYIM---SFYAFFDLWVKN-----LLIDSINWKNDLTNC 605
Query: 116 INVT 119
IN T
Sbjct: 606 INNT 609
>M.Javanica_Scaff787g009898 on XP_001348946 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3553
Score = 23.9 bits (50), Expect = 5.1, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 12/64 (18%)
Query: 60 YEQLPVTVCQMNIELHHQPFYGSFFIRHRFFRNFDWFIRHGRFALMKTDSIN----VTDL 115
Y+ + CQM H P +G F+ FD ++++ + DSIN +T+
Sbjct: 554 YKSSEINKCQMTPSSHKVPKHGYIM---SFYAFFDLWVKN-----LLIDSINWKNDLTNC 605
Query: 116 INVT 119
IN T
Sbjct: 606 INNT 609
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6800g045497
(80 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum] 23 1.7
XP_818889 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.9
XP_802704 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.0
XP_804011 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.2
XP_819490 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.2
XP_804105 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.2
>M.Javanica_Scaff6800g045497 on XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2994
Score = 23.5 bits (49), Expect = 1.7, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Query: 22 NFGHQLFWNFGHQRN--FGHQIKKRN 45
+F Q+F+ FG R+ FG I K N
Sbjct: 969 DFKRQMFYTFGDYRDFLFGTDISKLN 994
>M.Javanica_Scaff6800g045497 on XP_818889 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 750
Score = 23.1 bits (48), Expect = 2.9, Method: Composition-based stats.
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 52 RRGEFGRRSEFFDL 65
R+GEF RSE F++
Sbjct: 3 RKGEFAPRSESFEM 16
>M.Javanica_Scaff6800g045497 on XP_802704 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 318
Score = 22.3 bits (46), Expect = 4.0, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 13 GILVTKDFRNFGHQLFWNFGHQRNFGH 39
G+L+ K + G+++ WN H FG+
Sbjct: 203 GLLLVKGSVSGGNEITWNETHAVTFGN 229
>M.Javanica_Scaff6800g045497 on XP_804011 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 952
Score = 22.3 bits (46), Expect = 4.2, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 13 GILVTKDFRNFGHQLFWNFGHQRNFGH 39
G+L+ K + G+++ WN H FG+
Sbjct: 203 GLLLVKGSVSGGNEITWNETHAVTFGN 229
>M.Javanica_Scaff6800g045497 on XP_819490 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 997
Score = 22.3 bits (46), Expect = 4.2, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 13 GILVTKDFRNFGHQLFWNFGHQRNFGH 39
G+L+ K + G+++ WN H FG+
Sbjct: 166 GLLLVKGSVSGGNEITWNETHAVTFGN 192
>M.Javanica_Scaff6800g045497 on XP_804105 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1017
Score = 22.3 bits (46), Expect = 4.2, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 13 GILVTKDFRNFGHQLFWNFGHQRNFGH 39
G+L+ K + G+++ WN H FG+
Sbjct: 204 GLLLVKGSVSGGNEITWNETHAVTFGN 230
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5655g040426
(101 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAF14193 SBP3 (Others) [Babesia bovis] 23 6.4
>M.Javanica_Scaff5655g040426 on AAF14193 SBP3 (Others) [Babesia bovis]
Length = 1089
Score = 22.7 bits (47), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 10/49 (20%), Positives = 24/49 (48%)
Query: 50 QPNNQDVLASSQMRPPKSDLTNFWCLVYYYEMNERVGEVFKSEWKQXSY 98
QP+ + V+ +Q+ PP ++ + + + ++N R W + +Y
Sbjct: 295 QPDQEGVINYTQLTPPSQHISKMFSQLQFLKVNIRQSPRENGPWTRTTY 343
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7325g047628
(547 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_818859 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.70
XP_812792 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 1.4
>M.Javanica_Scaff7325g047628 on XP_818859 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 867
Score = 29.3 bits (64), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 340 IKILILSNFVGENVTDKMKPEEKNKLVETINKTNFNLTG 378
+++L S ENVTD + P K ++++TN + +G
Sbjct: 780 VRVLAGSESSAENVTDGLSPHTAAKNGTSVSETNHSASG 818
>M.Javanica_Scaff7325g047628 on XP_812792 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 879
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 60/147 (40%), Gaps = 19/147 (12%)
Query: 98 IVLNSKTKKEAIDKAKNHLWFY-------IECV--DGFFIQTKTKNKHKKQMSDTNKQPE 148
+ L ++K+ +K + HLW I V DG + +K D NK+ E
Sbjct: 384 VTLPVYSEKDGNEKGELHLWLTDNTHIVDIGSVSDDGDEEVAASSLLYKSGTGD-NKKEE 442
Query: 149 FKGIFQLNEGSENYKNLLRSFLLTKPLYIATLMYKTLKEYDTHSFLEIVSTQKLEE---- 204
+++ +GSE + S LLT+ L + T KE D L S E+
Sbjct: 443 LIALYEKKKGSEKTSPGMVSVLLTEQLKRVKKVLATWKEVDGRVSLLCTSLIAQEDRSTD 502
Query: 205 -----LKVSLKLMAVLYPNFKEIKFLD 226
++V+ L+ L NF + ++D
Sbjct: 503 TACSAVEVTDGLVGFLSGNFSDGTWMD 529
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7517g048414
(124 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_807757 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.69
XP_001349437 PfEMP1 (Establishment) [Plasmodium falciparum] 23 7.0
>M.Javanica_Scaff7517g048414 on XP_807757 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 205
Score = 25.8 bits (55), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 25/44 (56%)
Query: 8 LSASQYKAQHNELNADVVLDYLHTHPGFLESFVTGPQISAETFQ 51
+S ++ +A++N+ + LD G++++ T P I AET +
Sbjct: 117 ISVAEGRAKYNDPHKSGWLDSSDIVAGYIDAAGTWPSIVAETTK 160
>M.Javanica_Scaff7517g048414 on XP_001349437 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2231
Score = 23.1 bits (48), Expect = 7.0, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 6/49 (12%)
Query: 77 EKNFRQMLSDNIVNRNRLLYELALSCAQVAQV-----EQFELVVPASAN 120
+KN +Q+ ++NI N LL ++ L+ + EQ+E+ P+S +
Sbjct: 130 DKNIQQIKTENITTHN-LLLDVCLAAKYEGESLKGYHEQYEVQYPSSGS 177
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff270g004218
(75 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_819966 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.44
>M.Javanica_Scaff270g004218 on XP_819966 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 716
Score = 25.0 bits (53), Expect = 0.44, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 28 GTQQLKEKQRRTKRTRSCSINWPFPGVIKGAQCRGIQ--EWLN 68
GT + R + NW FP A+C GI EW N
Sbjct: 277 GTNEQHGHSNRIIYSTDDGANWVFPAGTPPAECVGISITEWEN 319
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff25980g091712
(69 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_650534 HgI (Adhesin) [Entamoeba histolytica] 23 2.0
XP_001609166 variant erythrocyte surface antigen-1, beta subuni... 22 3.8
XP_817382 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 6.5
XP_810023 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 7.3
P92132 CP2 (Cysteine protease) [Giardia duodenalis] 21 7.5
>M.Javanica_Scaff25980g091712 on XP_650534 HgI (Adhesin) [Entamoeba histolytica]
Length = 1207
Score = 23.1 bits (48), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 41 AEGMCRCRLNYSGRKMDSSGHSS 63
AEGM CR Y G K+ + SS
Sbjct: 164 AEGMSPCRFEYIGGKVITFRSSS 186
>M.Javanica_Scaff25980g091712 on XP_001609166 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1161
Score = 22.3 bits (46), Expect = 3.8, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 24 KTCDCDPGIAYANHCDSAEG 43
K CDC G+ + C ++ G
Sbjct: 158 KKCDCPSGVGASGCCSTSSG 177
>M.Javanica_Scaff25980g091712 on XP_817382 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 836
Score = 21.6 bits (44), Expect = 6.5, Method: Composition-based stats.
Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Query: 38 CDSAEGMCRCRL-NYSGRKMDSSGHSS 63
C S +G C CR+ + +G K + H S
Sbjct: 154 CPSEQGECSCRIADQAGTKSGTRIHVS 180
>M.Javanica_Scaff25980g091712 on XP_810023 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 804
Score = 21.6 bits (44), Expect = 7.3, Method: Composition-based stats.
Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Query: 38 CDSAEGMCRCRL-NYSGRKMDSSGHSS 63
C S +G C CR+ + +G K + H S
Sbjct: 100 CPSEQGECSCRIADQAGTKSGTRIHVS 126
>M.Javanica_Scaff25980g091712 on P92132 CP2 (Cysteine protease) [Giardia duodenalis]
Length = 255
Score = 21.2 bits (43), Expect = 7.5, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 26/65 (40%), Gaps = 5/65 (7%)
Query: 3 EQCDHCLQEHYGLSVADPNGCKTCDCDPGIAYANHCDSAEGMCRCRLNYSGRKMDSSGHS 62
E+ HC+ E V D GC +C +A G+ + + YS + + S H
Sbjct: 83 EEYPHCIPE-----VVDQGGCGSCWAFSSVATFGDRRCVAGLDKKPVKYSPQYVVSCDHG 137
Query: 63 SININ 67
+ N
Sbjct: 138 DMACN 142
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff26478g092409
(179 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2866g025716
(315 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349533 PfEMP3 (Establishment) [Plasmodium falciparum] 27 2.1
XP_001610197 variant erythrocyte surface antigen-1, beta subuni... 26 4.5
XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum] 26 4.9
XP_001348275 RAP1 (Invasion) [Plasmodium falciparum] 25 5.7
XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum] 25 6.4
XP_805084 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 7.1
XP_001349737 PfEMP1 (Establishment) [Plasmodium falciparum] 25 9.0
XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum] 25 9.7
>M.Javanica_Scaff2866g025716 on XP_001349533 PfEMP3 (Establishment) [Plasmodium falciparum]
Length = 2441
Score = 26.9 bits (58), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 41/96 (42%), Gaps = 17/96 (17%)
Query: 22 GKEVEVKIKDDWKEKREFIYLKNVE--------LKERFVLKRIERFHKRYGRSCYNIDGF 73
GKEV K +++ +E E Y+KN E LKE LK E +K DG
Sbjct: 1042 GKEVTNKARENLEEYEEKDYMKNNELQNKGSDGLKENAELKNKELRNK-------GSDGL 1094
Query: 74 LRPIELIPKANIFSVKINDGLEYIIELKMRVLIEIG 109
EL K K +DGL+ ELK + L G
Sbjct: 1095 KENAEL--KNKELRNKGSDGLKENAELKNKELQNKG 1128
>M.Javanica_Scaff2866g025716 on XP_001610197 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1123
Score = 25.8 bits (55), Expect = 4.5, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 205 IGSKISEINEGNRRHCFNCG-VKQYKKCY 232
+G K ++ N C+ CG V KKCY
Sbjct: 174 VGGKCCTNDDKNSHECYQCGKVTAPKKCY 202
>M.Javanica_Scaff2866g025716 on XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3346
Score = 25.8 bits (55), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 10/65 (15%)
Query: 55 RIERFHKRYGRSCYNIDGFLRPI-ELIPKANIFSVKINDGLEYIIELKMRVLIEIGNNKS 113
+IE K G+S ++D +L P E I +N LEY+++ ++++GNNK
Sbjct: 2367 KIETQWKDTGKSGKHVDVYLPPRREHICTSN---------LEYLLKGNSDQIMKVGNNKI 2417
Query: 114 IQKFL 118
FL
Sbjct: 2418 NHSFL 2422
>M.Javanica_Scaff2866g025716 on XP_001348275 RAP1 (Invasion) [Plasmodium falciparum]
Length = 782
Score = 25.4 bits (54), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 29/85 (34%)
Query: 132 INKDNNYETSILNEIFEKLKINKIELLKENKENYKNKLLSNYWTEINLIGYKMELLGKQK 191
+N DNNY +I+N F N ++Y NYWT IN K E L +
Sbjct: 25 VNGDNNYGKTIINNDF-------------NFDDY------NYWTPIN----KKEFLNSYE 61
Query: 192 VKYPKELKSEIKFIGSKISEINEGN 216
K+ E F+ +K S +++GN
Sbjct: 62 DKFSSE-----SFLENK-SSVDDGN 80
>M.Javanica_Scaff2866g025716 on XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3119
Score = 25.4 bits (54), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 180 IGYKMELLGKQKVKYPKELKSEIKFIGSKISEINEG 215
+G + E KQK KY KE+++ + G S IN G
Sbjct: 374 LGNQREAFRKQKEKYAKEIEAYVTNRGIPKSSINNG 409
>M.Javanica_Scaff2866g025716 on XP_805084 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 828
Score = 25.0 bits (53), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 110 NNKSIQKFLPGLEKRVLRYNNFINKDNNYETSILNEIFEKLKINKIELLKENKENYKN-- 167
+ K ++K G E + F +NY ++ + +E+L + + E EN
Sbjct: 500 SEKGVKKVYNGFELTGVDARIFWPAGSNYNNALYSPRYEELTVVATVTINEAPENITPLL 559
Query: 168 --KLLSNYWTEINL 179
++ + W E+NL
Sbjct: 560 GVSVVGSTWRELNL 573
>M.Javanica_Scaff2866g025716 on XP_001349737 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2199
Score = 24.6 bits (52), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 8 SLLILVFLLNIPCNGKEVEVKIKDDWKEKREFIYLKNVELKERFVLKRIERFHKRYGRSC 67
+ + + NI N KEV + + DD K EF + E K++ + K I + G+ C
Sbjct: 1440 TTIAATEIENIKTNTKEVTMLVSDDSKSATEFKDGLS-ECKDKGIFKGIRKDEWECGKVC 1498
>M.Javanica_Scaff2866g025716 on XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2980
Score = 24.6 bits (52), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 4/31 (12%)
Query: 146 IFEKLKINKIELLKENKENYKNKLLSNYWTE 176
I EK + K E+ K+ YKN+LL ++W E
Sbjct: 1348 ILEKENLTKSEV----KQKYKNELLDDWWNE 1374
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5125g037970
(110 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAL38220 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 5.4
AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 5.4
AAL38218 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 5.4
AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 5.7
AAL38222 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 5.7
>M.Javanica_Scaff5125g037970 on AAL38220 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2957
Score = 23.1 bits (48), Expect = 5.4, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 1 MNSWVEKINNILNQLIFIYIQQNNYTEN 28
++S+ +KINNI N+L +++ Y N
Sbjct: 2110 ISSYYDKINNINNKLYIYKNKEDTYFNN 2137
>M.Javanica_Scaff5125g037970 on AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2965
Score = 23.1 bits (48), Expect = 5.4, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 1 MNSWVEKINNILNQLIFIYIQQNNYTEN 28
++S+ +KINNI N+L +++ Y N
Sbjct: 2116 ISSYYDKINNINNKLYIYKNKEDTYFNN 2143
>M.Javanica_Scaff5125g037970 on AAL38218 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2977
Score = 23.1 bits (48), Expect = 5.4, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 1 MNSWVEKINNILNQLIFIYIQQNNYTEN 28
++S+ +KINNI N+L +++ Y N
Sbjct: 2120 ISSYYDKINNINNKLYIYKNKEDTYFNN 2147
>M.Javanica_Scaff5125g037970 on AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2969
Score = 23.1 bits (48), Expect = 5.7, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 1 MNSWVEKINNILNQLIFIYIQQNNYTEN 28
++S+ +KINNI N+L +++ Y N
Sbjct: 2112 ISSYYDKINNINNKLYIYKNKEDTYFNN 2139
>M.Javanica_Scaff5125g037970 on AAL38222 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2976
Score = 23.1 bits (48), Expect = 5.7, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 1 MNSWVEKINNILNQLIFIYIQQNNYTEN 28
++S+ +KINNI N+L +++ Y N
Sbjct: 2123 ISSYYDKINNINNKLYIYKNKEDTYFNN 2150
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff28898g095681
(91 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351513 PfEMP1 (Establishment) [Plasmodium falciparum] 27 0.22
XP_001351321 PfEMP1 (Establishment) [Plasmodium falciparum] 25 0.55
XP_815822 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.4
XP_001349030 PfEMP1 (Establishment) [Plasmodium falciparum] 23 2.6
>M.Javanica_Scaff28898g095681 on XP_001351513 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2152
Score = 26.6 bits (57), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 52 KKIRER-----DKTRYEISQKIRDFHEIRDHEILSIFLNYSILK 90
K+I+ER D Y+I+ K+R + E + ++ NY +LK
Sbjct: 1489 KQIKERYKVHHDSKGYDIAHKVRSYFEKNESDVNKSIDNYEVLK 1532
>M.Javanica_Scaff28898g095681 on XP_001351321 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3467
Score = 25.4 bits (54), Expect = 0.55, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 19/29 (65%)
Query: 62 YEISQKIRDFHEIRDHEILSIFLNYSILK 90
Y++S K++++ E ++E+ NY +LK
Sbjct: 2808 YDMSHKVKNYFEKNENELRKWIDNYDVLK 2836
>M.Javanica_Scaff28898g095681 on XP_815822 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 884
Score = 24.3 bits (51), Expect = 1.4, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Query: 34 WSSCHKIRDTRFTRYE-ILKKIRERD 58
WSS HK+ +F R I +I RD
Sbjct: 416 WSSKHKVEKVKFARSGFITARIENRD 441
>M.Javanica_Scaff28898g095681 on XP_001349030 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 23.5 bits (49), Expect = 2.6, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 12/22 (54%)
Query: 46 TRYEILKKIRERDKTRYEISQK 67
T YE KK E K+ YE QK
Sbjct: 1295 TEYEKQKKAYEEQKSNYENEQK 1316
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff410g005966
(57 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_845143 VSG (Establishment) [Trypanosoma brucei] 23 1.5
>M.Javanica_Scaff410g005966 on XP_845143 VSG (Establishment) [Trypanosoma brucei]
Length = 501
Score = 22.7 bits (47), Expect = 1.5, Method: Composition-based stats.
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 23 TKNCGQLVPRSARPCQRRQPMHVITS 48
TK CG++ PR + + RQ + I +
Sbjct: 277 TKLCGKIPPRQLKENELRQAIEEIVA 302
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3412g029006
(56 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_816720 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 2.9
XP_808836 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 3.4
>M.Javanica_Scaff3412g029006 on XP_816720 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 782
Score = 21.9 bits (45), Expect = 2.9, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 19 LFWGEKFEYAINSSFERALQAESNDTKIAVIGQDCSK 55
FW +K E SS + E ND AV C++
Sbjct: 84 FFWRDKNEGETVSSLRVPVLVEMNDDVFAVAEAQCTE 120
>M.Javanica_Scaff3412g029006 on XP_808836 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 376
Score = 21.6 bits (44), Expect = 3.4, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 19 LFWGEKFEYAINSSFERALQAESNDTKIAVIGQDCSK 55
FW +K E SS + E ND AV C++
Sbjct: 84 FFWRDKNEGETVSSLRVPVLVEMNDDVFAVAEAQCTE 120
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7645g048905
(114 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349522 PfEMP1 (Establishment) [Plasmodium falciparum] 25 1.3
XP_845134 VSG (Establishment) [Trypanosoma brucei] 25 1.6
XP_001612315 variant erythrocyte surface antigen-1, beta subuni... 23 4.0
XP_001611205 variant erythrocyte surface antigen-1, beta subuni... 23 4.1
XP_845635 VSG (Establishment) [Trypanosoma brucei] 23 6.4
>M.Javanica_Scaff7645g048905 on XP_001349522 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 355
Score = 25.0 bits (53), Expect = 1.3, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 24 SSHPETLSYSLETSNXLSNRNFYKY 48
SSH + L ET N +S N Y Y
Sbjct: 271 SSHDDILKIKDETYNIISTNNLYSY 295
>M.Javanica_Scaff7645g048905 on XP_845134 VSG (Establishment) [Trypanosoma brucei]
Length = 486
Score = 24.6 bits (52), Expect = 1.6, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 20/44 (45%)
Query: 67 LSCEQLCPLTEAFLKRPCAIDSKLWVTVCPMTAELEGIENLWIL 110
+C Q+ P T A K C +D + T LEG+ + +L
Sbjct: 152 FTCAQVFPATAASTKPDCKLDDLTTIFNGDKTLNLEGVHTIKLL 195
>M.Javanica_Scaff7645g048905 on XP_001612315 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1140
Score = 23.5 bits (49), Expect = 4.0, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 48 YAIELFAGNLKHKNEELKPLSCEQLC 73
Y IE F G L+ +E K + C++ C
Sbjct: 929 YLIEGFEGGLQSLVQEYKNIQCKEDC 954
>M.Javanica_Scaff7645g048905 on XP_001611205 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1146
Score = 23.5 bits (49), Expect = 4.1, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 48 YAIELFAGNLKHKNEELKPLSCEQLC 73
Y IE F G L+ +E K + C++ C
Sbjct: 914 YLIEGFEGGLQSLVQEYKNIQCKEDC 939
>M.Javanica_Scaff7645g048905 on XP_845635 VSG (Establishment) [Trypanosoma brucei]
Length = 487
Score = 22.7 bits (47), Expect = 6.4, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
Query: 64 LKPLSCEQLCPLTEAFLKRPCA-----IDSKLWVTVCPMTAELEGIE 105
L+PL + L LKR A I W +C ++ EL+GIE
Sbjct: 7 LQPLVLFVMTLLLATGLKRVDAATGVGIKKTTWEPLCQVSEELDGIE 53
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff437g006268
(149 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_809850 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.23
XP_827773 VSG (Establishment) [Trypanosoma brucei] 27 0.58
XP_827709 VSG (Establishment) [Trypanosoma brucei] 26 0.85
XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum] 25 3.2
>M.Javanica_Scaff437g006268 on XP_809850 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 915
Score = 28.1 bits (61), Expect = 0.23, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 72 AQLPQDDEGEEAKKAFAHFFWSETDSSVTLDEFFEHGDNKIGILMIN 118
A+ P ++GE FA++ ++ ++V++D+ E GDN I ++ +N
Sbjct: 568 AEWPVGEQGENQLYHFANYNFTLV-ATVSIDKAPEEGDNTIPLMGVN 613
>M.Javanica_Scaff437g006268 on XP_827773 VSG (Establishment) [Trypanosoma brucei]
Length = 497
Score = 26.6 bits (57), Expect = 0.58, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 72 AQLPQDDEGEEAKKAFAHFFWSETDSSVTLDEFF 105
Q P++ + E+ K A TD S TLD+FF
Sbjct: 345 GQTPKEGDNEQGKNAVKKLL--GTDDSKTLDKFF 376
>M.Javanica_Scaff437g006268 on XP_827709 VSG (Establishment) [Trypanosoma brucei]
Length = 474
Score = 26.2 bits (56), Expect = 0.85, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Query: 55 LDTIFSINKSKLINYHRAQLPQDDE-----GEEAKKAFAHFFWSETDSSVTLDEFFEHGD 109
+D + I+ ++ N ++ Q+ E ++ K F+ E D V + E+ D
Sbjct: 277 MDAVTEISANRRTNLYKLGEKQNKEIKDCGADKNSKEGICVFYRERDGVVFWMKALENVD 336
Query: 110 NKIGILMINHTEKAKIKLKNI 130
NK+ +L+ + T+K KL+ I
Sbjct: 337 NKMEVLLQDRTKKTS-KLERI 356
>M.Javanica_Scaff437g006268 on XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2264
Score = 24.6 bits (52), Expect = 3.2, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 23/55 (41%)
Query: 92 WSETDSSVTLDEFFEHGDNKIGILMINHTEKAKIKLKNILKIIFFNYKKSNPNYQ 146
W +F + G+N G ++ E L+ +LK+ F+ K + + Q
Sbjct: 696 WDRIKQQFRKQDFRKQGENIAGGMLGKEIESPDFVLQEVLKLEFYKEKSEDGSAQ 750
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2660g024396
(201 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_818312 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.32
XP_815188 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.6
XP_815905 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 9.8
>M.Javanica_Scaff2660g024396 on XP_818312 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 928
Score = 28.5 bits (62), Expect = 0.32, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 37/94 (39%), Gaps = 3/94 (3%)
Query: 53 EGANIKQIFYDNDLEKIARKWNCSGGNDEEFGENVYGYTGKPANVLLKACIAWADTCKYG 112
EGA K F + A+K + S G ++Y GK + C A + K G
Sbjct: 144 EGAREKTQFLEEGTSPEAKKVDVSRPTAVVNGSDIYMLVGKRSYEAATNCQAGTEKIKSG 203
Query: 113 VSEELIYDSEHSRSGSCTQMIWAESFKIGCAYVD 146
+ L+ E S G Q+ W E+ + C D
Sbjct: 204 I---LLVKGEISGEGGNEQIHWRETDGLPCTLGD 234
>M.Javanica_Scaff2660g024396 on XP_815188 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 862
Score = 25.0 bits (53), Expect = 3.6, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
Query: 86 NVYGYTGKPANVLLKACIAWADTCKYGVSEELIYDSEHSRSGSCTQMIWAESFKIGCAYV 145
N+Y GK + L C A DT K G+ L+ E G+ ++ W ++ + CA
Sbjct: 174 NIYMLVGKNSGENLAECKATTDTIKSGI---LLVKGEVGEGGN--KINWNDTDGLPCALG 228
Query: 146 D 146
D
Sbjct: 229 D 229
>M.Javanica_Scaff2660g024396 on XP_815905 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 888
Score = 23.9 bits (50), Expect = 9.8, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 5/104 (4%)
Query: 43 KGENSEGFLPEGANIKQIFYDNDLEKIARKWNCSGGNDEEFGENVYGYTGKPANVLLKAC 102
KG+ E L + + + D +EK +K + S G N+Y GK ++ C
Sbjct: 136 KGKGPEEVLKDAKYTQVLEEDISMEK--KKVDVSRPTTVVKGNNIYMIVGKHSHEDAANC 193
Query: 103 IAWADTCKYGVSEELIYDSEHSRSGSCTQMIWAESFKIGCAYVD 146
A + K G+ L+ E ++ W E+ + C D
Sbjct: 194 QAGTENTKSGI---LLVKGEVGGEADNNRIHWKETDGVPCTLGD 234
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3522g029612
(81 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_806989 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.3
XP_817389 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.8
XP_845136 VSG (Establishment) [Trypanosoma brucei] 22 6.3
XP_821395 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 9.1
>M.Javanica_Scaff3522g029612 on XP_806989 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 922
Score = 22.3 bits (46), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 40 SFEKPWRRNFQRRIQHSSKWEYYLRGSTN 68
+ EK W+ F +++SS ++Y + TN
Sbjct: 574 THEKKWKVTFGESLRNSSAYDYGVGWETN 602
>M.Javanica_Scaff3522g029612 on XP_817389 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 792
Score = 22.3 bits (46), Expect = 4.8, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Query: 22 LCDEYSARDENSENVGDESFEKPWR 46
C +A ENS++V D +FE WR
Sbjct: 4 FCGGGAAAVENSDSVADPTFE--WR 26
>M.Javanica_Scaff3522g029612 on XP_845136 VSG (Establishment) [Trypanosoma brucei]
Length = 481
Score = 21.9 bits (45), Expect = 6.3, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 5 PKFTAPKTPVTNIPFFRLCDEYSA 28
P T P+ P+ LCD Y+A
Sbjct: 17 PGKTTNNQPLKTTPWKNLCDVYAA 40
>M.Javanica_Scaff3522g029612 on XP_821395 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 768
Score = 21.6 bits (44), Expect = 9.1, Method: Composition-based stats.
Identities = 10/20 (50%), Positives = 14/20 (70%), Gaps = 2/20 (10%)
Query: 27 SARDENSENVGDESFEKPWR 46
+A DENSE+ D +FE W+
Sbjct: 63 AAADENSESETDPNFE--WK 80
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7536g048490
(276 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609619 variant erythrocyte surface antigen-1, beta subuni... 27 1.4
XP_001609936 variant erythrocyte surface antigen-1, beta subuni... 26 3.1
XP_829781 VSG (Establishment) [Trypanosoma brucei] 25 4.7
XP_818092 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 10.0
>M.Javanica_Scaff7536g048490 on XP_001609619 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1086
Score = 26.9 bits (58), Expect = 1.4, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 27/70 (38%), Gaps = 7/70 (10%)
Query: 104 PLDWTAEPENPFREPTPPPPAKQNEDFHPKGPTTSTSLRSKTNLPIPLIEYLCQLRNCSF 163
P+ W+AE +P R + QN H KG T N L+EY C C
Sbjct: 704 PMGWSAE--SPSRTTS-----GQNRVNHFKGNTGKYPAHCTGNTLSLLLEYYCDPEKCQS 756
Query: 164 KELHVLFHNL 173
L VL L
Sbjct: 757 GTLVVLLRLL 766
>M.Javanica_Scaff7536g048490 on XP_001609936 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1133
Score = 25.8 bits (55), Expect = 3.1, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 26/73 (35%), Gaps = 3/73 (4%)
Query: 104 PLDWTAEP---ENPFREPTPPPPAKQNEDFHPKGPTTSTSLRSKTNLPIPLIEYLCQLRN 160
P+ W+ E EN F++ T + P G + N L+EY C
Sbjct: 734 PMGWSKEGTSGENHFKDLTQGTHKQAELTTKPPGTNNKYPVHCTGNTLALLLEYYCDPEK 793
Query: 161 CSFKELHVLFHNL 173
C L VL L
Sbjct: 794 CPSGTLVVLLRLL 806
>M.Javanica_Scaff7536g048490 on XP_829781 VSG (Establishment) [Trypanosoma brucei]
Length = 514
Score = 25.4 bits (54), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 166 LHVLFHNLDARREIIDHLRQSVQLRTSHLKPT 197
+H+ FH AR + I + Q +Q + H T
Sbjct: 373 MHLYFHYRSAREQAIQNRMQKLQEKAKHASDT 404
>M.Javanica_Scaff7536g048490 on XP_818092 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 884
Score = 24.3 bits (51), Expect = 10.0, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 40/103 (38%), Gaps = 27/103 (26%)
Query: 15 VIEDDPEPEQQQNTSSEAQTDQPALVVVEDSGDEVEEKEKKGVDVITPAFGLLTIM---- 70
V +DD S+E TD+ L+ + EK+KKG + P+ G+++++
Sbjct: 418 VSDDDAAASSLLYKSAEGGTDKKELIA-------LYEKKKKGDE--KPSPGMVSVLLTAQ 468
Query: 71 --------------DDIVEDKMDEEQIEDEINIDTNDKILRIT 99
DD V +ED D I+RIT
Sbjct: 469 LQRVKEVLATWKKADDRVSKLCPSSDVEDASTGDACSPIVRIT 511
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4576g035292
(83 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001610713 variant erythrocyte surface antigen-1, alpha subun... 25 0.65
XP_809398 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 8.7
>M.Javanica_Scaff4576g035292 on XP_001610713 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1294
Score = 25.0 bits (53), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 29 GGYNTGKKCKGLGGNSPPE 47
GG +G +CKG GGN P
Sbjct: 88 GGEKSGSQCKGTGGNDNPH 106
>M.Javanica_Scaff4576g035292 on XP_809398 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 139
Score = 21.6 bits (44), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 21 KAIAAKCPGGYNTGKKCKGLGGNSPPECK--DYIGPDKVGGKL 61
+ +AA G GK G +PP K + G + G L
Sbjct: 58 RIVAAAVDGSSGEGKAVDPFQGTTPPPYKWQEMTGSEAAAGSL 100
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2869g025747
(321 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_845142 VSG (Establishment) [Trypanosoma brucei] 29 0.43
XP_804171 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 3.1
XP_001609315 variant erythrocyte surface antigen-1, alpha subun... 25 7.4
>M.Javanica_Scaff2869g025747 on XP_845142 VSG (Establishment) [Trypanosoma brucei]
Length = 481
Score = 28.9 bits (63), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 17/105 (16%)
Query: 29 VKIKDDWQEKREFIYLKNVELEERFVMNKIE--KQINQYDASYTYNIEG------YLRRI 80
V DD Q+ I + N+ L ++KI+ K + +AS +G +L+ +
Sbjct: 45 VPAVDDTQDIAATIGVINISLANADFISKIDLKKDYSDSNASMKEAADGKPSKYAFLKNV 104
Query: 81 Y-VNHEGNYKVEIDDRSEYAEELKRRILINIAKNKIIQNIHPGFE 124
V+H D+ YAE ++RR L AK K+IQ F+
Sbjct: 105 LEVSHG-------QDKKSYAE-VRRRQLTTAAKRKLIQAAEVAFQ 141
>M.Javanica_Scaff2869g025747 on XP_804171 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 787
Score = 26.2 bits (56), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 5/98 (5%)
Query: 9 SLFLFSLLNIKCDGRKVSIEVKIKDDWQEKRE-FIYLKNVELEERFVMNK--IEKQINQY 65
SL + +L+ DGRKV + + D EKRE +YL + F I+ + +
Sbjct: 372 SLRVEALITATIDGRKVMLYTQRGDSSGEKRERALYLWVTDNNRSFYFGPIGIDSAVGEE 431
Query: 66 DASYTYNIEGYLRRIYVNHEGNYKVEIDDRSEYAEELK 103
AS +G L + G+Y+ S EEL
Sbjct: 432 FASTLMYSDGNLH--LLQQRGDYESTFMSLSRLTEELS 467
>M.Javanica_Scaff2869g025747 on XP_001609315 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1338
Score = 25.0 bits (53), Expect = 7.4, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 64/169 (37%), Gaps = 53/169 (31%)
Query: 85 EGNYKVEIDDRSEYAEELKRRILINIAKNKIIQNIHPGFEKQVVRFTEFIKKKNKYYETS 144
+GN E++ E A+ +++ + AK+KI IH +V+ + + K K YE
Sbjct: 761 KGNLLGEVEGALENAKNIEKERDYSNAKDKISAAIH-----KVLEVLKILTKLAKQYE-- 813
Query: 145 ILDESLEKINKKELLKEKIENFKDKLLSSYWTEINLIGYKIELFEKRKVEYANELKS--T 202
E KDK+ + T KIEL + + ELK
Sbjct: 814 -------------------EELKDKMKGNEPTN-----NKIEL-----ISFIKELKEFLN 844
Query: 203 IIDIGNKISRVNEVNKRKCFNCRVIQTK----PWYRYLKEHYLCQLCHE 247
IID + V +C +CR TK P +Y C CH+
Sbjct: 845 IID-----DMFDIVGSTRCVHCRDHSTKCGKEPVSKY------CNTCHQ 882
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2711g024747
(139 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAK97078 ECSP (Others) [Giardia duodenalis] 24 4.3
XP_001610714 variant erythrocyte surface antigen-1, alpha subun... 23 5.6
>M.Javanica_Scaff2711g024747 on AAK97078 ECSP (Others) [Giardia duodenalis]
Length = 255
Score = 23.9 bits (50), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 6/90 (6%)
Query: 48 IESLWSIYKRKFRHQAGNNTGTYKNP-NIHTQNIESLWSTYKRKFRHQAGNNTGTYKSYL 106
+ +WS+ F++ GN T ++ P NI + + ++ TGT+
Sbjct: 24 VLGVWSLQFTDFKYSGGNGTDRFECPANIAATTTKRIRLLAPNIAINEQTGATGTWTMAY 83
Query: 107 PEFLWRKRFGNIENVFYNFWHHVSLFYPCE 136
E L R + +FY W YP E
Sbjct: 84 TEGL-EIRLNGLNYLFYFAWKE----YPLE 108
>M.Javanica_Scaff2711g024747 on XP_001610714 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1231
Score = 23.5 bits (49), Expect = 5.6, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 53 SIYKRKFRHQAGNNTGTYKNPNIHT 77
S YK+ ++ NN + KN NI T
Sbjct: 180 SCYKKSYKSAYSNNNDSRKNDNIVT 204
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff27698g094086
(295 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff26985g093120
(174 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_844697 VSG (Establishment) [Trypanosoma brucei] 25 3.9
XP_815706 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 7.9
XP_815707 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 7.9
>M.Javanica_Scaff26985g093120 on XP_844697 VSG (Establishment) [Trypanosoma brucei]
Length = 342
Score = 24.6 bits (52), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 147 NDGLNNIQSKNETDKLQTQNEPPQEQQ 173
NDG N Q+ ++K T PP+EQ+
Sbjct: 297 NDGNPNAQATTSSEKDATTTRPPEEQK 323
>M.Javanica_Scaff26985g093120 on XP_815706 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 907
Score = 23.9 bits (50), Expect = 7.9, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Query: 63 YYGGGSNTNDNSEFKYHNHQPPSHSGIFNN 92
YYGG S+ E+ N P H IF N
Sbjct: 75 YYGGHSSEQSQREYPVANPPVPGH--IFRN 102
>M.Javanica_Scaff26985g093120 on XP_815707 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 907
Score = 23.9 bits (50), Expect = 7.9, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Query: 63 YYGGGSNTNDNSEFKYHNHQPPSHSGIFNN 92
YYGG S+ E+ N P H IF N
Sbjct: 75 YYGGHSSEQSQREYPVANPPVPGH--IFRN 102
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4591g035364
(241 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5512g039792
(50 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7329g047644
(95 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_816558 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.6
XP_802208 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 9.0
XP_829779 VSG (Establishment) [Trypanosoma brucei] 22 9.5
>M.Javanica_Scaff7329g047644 on XP_816558 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 813
Score = 22.7 bits (47), Expect = 5.6, Method: Composition-based stats.
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 37 LKNCDSNDAKCILNACDCIG 56
L+ C S +AKC + +C G
Sbjct: 154 LEKCPSQEAKCPSQSTNCAG 173
>M.Javanica_Scaff7329g047644 on XP_802208 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 410
Score = 21.9 bits (45), Expect = 9.0, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 14/39 (35%)
Query: 28 DTLEKSCARLKNCDSNDAKCILNACDCIGLGGPQGTGFD 66
DT + L+ C S KC L D G G D
Sbjct: 119 DTAQVKTQVLEECSSKKEKCSLQNADRTGSQSVTGVSVD 157
>M.Javanica_Scaff7329g047644 on XP_829779 VSG (Establishment) [Trypanosoma brucei]
Length = 486
Score = 21.9 bits (45), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 23 QSNCKDTLEKSCARLKNCDSNDAKCIL 49
+ CKDT + C K+C+ ++ KC L
Sbjct: 427 EKKCKDTEKNKCTADKDCEYSEGKCKL 453
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff29821g096798
(144 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_803379 VSG (Establishment) [Trypanosoma brucei] 25 2.5
XP_828098 VSG (Establishment) [Trypanosoma brucei] 24 4.6
>M.Javanica_Scaff29821g096798 on XP_803379 VSG (Establishment) [Trypanosoma brucei]
Length = 532
Score = 24.6 bits (52), Expect = 2.5, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 101 ASQCNKPISACEKMSRLHNGGPNGCSLARTDVYWNAVKRCAG 142
A+QC + ACE ++ GP+ C L T+V A + G
Sbjct: 425 AAQCKEKKPACEWQNKAAEDGPH-CKLNATNVEQQATQAGTG 465
>M.Javanica_Scaff29821g096798 on XP_828098 VSG (Establishment) [Trypanosoma brucei]
Length = 474
Score = 23.9 bits (50), Expect = 4.6, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
Query: 110 ACEKMSRLHNGG--PNGCSLARTDVYWNAVK 138
A + M H G P C L T V WNA K
Sbjct: 218 ASDMMCLCHGTGVTPQDCGLTVTAVQWNAAK 248
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3712g030742
(351 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_803347 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.48
XP_001611365 variant erythrocyte surface antigen-1, alpha subun... 27 1.5
XP_804625 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 9.0
>M.Javanica_Scaff3712g030742 on XP_803347 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 688
Score = 28.9 bits (63), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 43/105 (40%), Gaps = 10/105 (9%)
Query: 90 SDKGKSNAGGNAQIADLTSLTMAFGVLD------KMMFTEGDLNVVNKYNNKIKHFFEYR 143
D GK +GG A AD L + G L K+M GD+ V+ + F +
Sbjct: 40 GDYGKKTSGGRAADADGWRLLLTRGTLTEDGGQKKIM--RGDIRAVDPVAIGLTQFLKRV 97
Query: 144 ERINEIAVNTQIQFLIAQPGQIFKKVGKDIAKSMNLFNTMQKDCK 188
V T +L+ P Q +K G+ + SM FN + C+
Sbjct: 98 IGGGGSGVVTNNGYLVL-PMQAVEKDGRSVVLSMR-FNMRIEACE 140
>M.Javanica_Scaff3712g030742 on XP_001611365 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1335
Score = 27.3 bits (59), Expect = 1.5, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 247 LEKTTETIKALNDVLAANRKKIEAKEKGKKWAIRSTKKDTLTEELVELNKIKENVDDDLK 306
+EK + A+ DV+ EA E GKK + K+ LTE EL KE +D+ +K
Sbjct: 671 IEKAKALLVAIGDVVVQLGNAQEALE-GKKTEGINAVKEKLTEAKGELEGAKEKLDEAVK 729
>M.Javanica_Scaff3712g030742 on XP_804625 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1042
Score = 25.0 bits (53), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 207 FIDQETINIKKYNRSFYKPTGLTH 230
F+DQE I KYN S ++ ++H
Sbjct: 643 FVDQEEIQKTKYNTSLFEEHRISH 666
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3748g030958
(154 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_807798 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.46
XP_804330 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.0
XP_815706 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.5
XP_815707 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.5
XP_810140 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.5
AAC37226 SBP1 (Others) [Babesia bovis] 25 2.9
XP_845633 VSG (Establishment) [Trypanosoma brucei] 25 3.1
XP_001351876 PfEMP1 (Establishment) [Plasmodium falciparum] 24 5.8
XP_001610197 variant erythrocyte surface antigen-1, beta subuni... 23 8.2
>M.Javanica_Scaff3748g030958 on XP_807798 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 875
Score = 27.3 bits (59), Expect = 0.46, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 10/19 (52%)
Query: 123 PPRPTTTPPTTTTPPPSTP 141
PP P TP T PSTP
Sbjct: 750 PPTPLVTPNAQQTETPSTP 768
>M.Javanica_Scaff3748g030958 on XP_804330 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 910
Score = 26.2 bits (56), Expect = 1.0, Method: Composition-based stats.
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 127 TTTPPTTTTPPPSTPQP 143
T T PT +P P+ PQP
Sbjct: 721 TETQPTVPSPTPAGPQP 737
>M.Javanica_Scaff3748g030958 on XP_815706 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 907
Score = 25.8 bits (55), Expect = 1.5, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 120 PTFPPRPTTTPPTTTTPPPSTPQPCGEK 147
P P T PT +P + PQP +K
Sbjct: 712 PLTTPAAKNTQPTVPSPATAGPQPTDQK 739
>M.Javanica_Scaff3748g030958 on XP_815707 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 907
Score = 25.8 bits (55), Expect = 1.5, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 120 PTFPPRPTTTPPTTTTPPPSTPQPCGEK 147
P P T PT +P + PQP +K
Sbjct: 712 PLTTPAAKNTQPTVPSPATAGPQPTDQK 739
>M.Javanica_Scaff3748g030958 on XP_810140 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 923
Score = 25.8 bits (55), Expect = 1.5, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 4/30 (13%)
Query: 118 TPPTFPP----RPTTTPPTTTTPPPSTPQP 143
T P+ P T T PT P P+ PQP
Sbjct: 703 TSPSVGPANERMTTNTQPTAPAPTPAGPQP 732
>M.Javanica_Scaff3748g030958 on AAC37226 SBP1 (Others) [Babesia bovis]
Length = 596
Score = 24.6 bits (52), Expect = 2.9, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 17/39 (43%)
Query: 57 PTRPPTTTPKPTPCENDYDCPSGYKCDYKISQCCWWGNR 95
P P TP TP E + P+ + S+ C+ G +
Sbjct: 400 PAETPAETPAETPAETPAETPAEKPAEKPASRPCYGGRK 438
>M.Javanica_Scaff3748g030958 on XP_845633 VSG (Establishment) [Trypanosoma brucei]
Length = 488
Score = 24.6 bits (52), Expect = 3.1, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 50 GRYCRIPPTRPPTTTPKPT 68
G +C IP +R P+TT T
Sbjct: 153 GEHCTIPTSRGPSTTDSCT 171
>M.Javanica_Scaff3748g030958 on XP_001351876 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3164
Score = 23.9 bits (50), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 120 PTFPPRPTTTPPTTTTPPPSTPQPC 144
PT PP+ PPT P TP+
Sbjct: 2022 PTKPPKKVEQPPTGIRAPTRTPRAA 2046
>M.Javanica_Scaff3748g030958 on XP_001610197 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1123
Score = 23.5 bits (49), Expect = 8.2, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 4/33 (12%)
Query: 26 GQCCWRGNR-FRNCFWC---IYPSSCYFGRYCR 54
G+CC ++ C+ C P CY YC+
Sbjct: 176 GKCCTNDDKNSHECYQCGKVTAPKKCYLSAYCK 208
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff25852g091530
(75 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_655415 Hgl (Adhesin) [Entamoeba histolytica] 23 2.9
XP_001349031 PfEMP1 (Establishment) [Plasmodium falciparum] 22 6.0
>M.Javanica_Scaff25852g091530 on XP_655415 Hgl (Adhesin) [Entamoeba histolytica]
Length = 1291
Score = 22.7 bits (47), Expect = 2.9, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 5 TFTIIFVIVQMVILTQAIENKAADVCNADQFAHNPCRCCKMDCWYS 50
T T +F ++ + + +K + C+A P CC+ DC+Y+
Sbjct: 378 TITALFKGIRANLTERCDRDKCSGFCDAMNRCTCP-MCCENDCFYT 422
>M.Javanica_Scaff25852g091530 on XP_001349031 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2275
Score = 21.9 bits (45), Expect = 6.0, Method: Composition-based stats.
Identities = 10/44 (22%), Positives = 18/44 (40%)
Query: 2 FLRTFTIIFVIVQMVILTQAIENKAADVCNADQFAHNPCRCCKM 45
+L F + I + + + K C+ D + N C C K+
Sbjct: 1547 WLEDFLYGYYISKKRKIVEKCTQKGEKACSGDGNSKNDCACVKI 1590
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff801g010045
(103 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_804241 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.53
Q9XYH7 MIC6 (Invasion) [Toxoplasma gondii] 25 1.0
XP_805718 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.0
XP_804648 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.8
XP_804748 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.9
XP_804553 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.1
XP_802738 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.3
XP_845634 VSG (Establishment) [Trypanosoma brucei] 22 9.5
>M.Javanica_Scaff801g010045 on XP_804241 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 765
Score = 25.8 bits (55), Expect = 0.53, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 26 CGISSSAIVANAAAITTPFGNPLSKEAGGAGN 57
CG +++A V N A +TP G+ L+ G G+
Sbjct: 58 CGGAATAEVENNADASTPSGSTLAGAIAGEGS 89
>M.Javanica_Scaff801g010045 on Q9XYH7 MIC6 (Invasion) [Toxoplasma gondii]
Length = 255
Score = 25.0 bits (53), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 45 GNPLSKEAGGAGNFIPLGCKRRCVPGVLIGLERSE 79
GNP A G P G RC PG ++G+E +
Sbjct: 42 GNPCGGTAAGTCINTPSGYDCRCEPGYVLGVENDQ 76
>M.Javanica_Scaff801g010045 on XP_805718 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 482
Score = 25.0 bits (53), Expect = 1.0, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 10/65 (15%)
Query: 26 CGISSSAIVANAAAITTPFGNPLSKEAGGAGNFIPLGCKRRCVPGVLIGLERSEDFDCPN 85
CG +++A V + A +TP G+ L+ G G+ G + GL+R + F
Sbjct: 58 CGGAATAEVGSNAVASTPSGSTLTGVIAGEGS----------TSGGVEGLQRVDLFVPQT 107
Query: 86 TFLVP 90
T ++P
Sbjct: 108 TQVLP 112
>M.Javanica_Scaff801g010045 on XP_804648 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 827
Score = 24.3 bits (51), Expect = 1.8, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 26 CGISSSAIVANAAAITTPFGNPLSKEAGGAGN 57
CG +++A V N A +TP G+ L+ G+
Sbjct: 58 CGGAATAQVGNNAVASTPSGSTLTGAITAEGS 89
>M.Javanica_Scaff801g010045 on XP_804748 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 843
Score = 24.3 bits (51), Expect = 1.9, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 10/65 (15%)
Query: 26 CGISSSAIVANAAAITTPFGNPLSKEAGGAGNFIPLGCKRRCVPGVLIGLERSEDFDCPN 85
CG +++A V + A +TP G+ L+ G G+ G + GL+R + F
Sbjct: 58 CGGAATAEVGSNADASTPSGSALTGVIAGEGS----------TSGGVEGLQRVDLFVPQT 107
Query: 86 TFLVP 90
T ++P
Sbjct: 108 TQVLP 112
>M.Javanica_Scaff801g010045 on XP_804553 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 827
Score = 24.3 bits (51), Expect = 2.1, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 26 CGISSSAIVANAAAITTPFGNPLSKEAGGAGN 57
CG +++A V A +TP G+ L+ G G+
Sbjct: 58 CGGAATAEVEKATDASTPSGSELTGAIAGEGS 89
>M.Javanica_Scaff801g010045 on XP_802738 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 140
Score = 23.5 bits (49), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 10/67 (14%)
Query: 26 CGISSSAIVANAAAITTPFGNPLSKEAGGAGNFIPLGCKRRCVPGVLIGLERSEDFDCPN 85
C +++A V A +TP G+ L+ G G+ G + G++R E F
Sbjct: 57 CSGATTAQVEKATDASTPSGSALTGAIAGEGS----------TSGRVEGMQRVELFVPQT 106
Query: 86 TFLVPID 92
T ++P D
Sbjct: 107 TQVLPKD 113
>M.Javanica_Scaff801g010045 on XP_845634 VSG (Establishment) [Trypanosoma brucei]
Length = 461
Score = 21.9 bits (45), Expect = 9.5, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 37 AAAITTPFGNPLSKEAGGAGN 57
AAA TT G+ + + GAGN
Sbjct: 214 AAATTTECGSATAPQVDGAGN 234
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3809g031293
(60 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_821390 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.11
XP_001610714 variant erythrocyte surface antigen-1, alpha subun... 25 0.25
>M.Javanica_Scaff3809g031293 on XP_821390 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 940
Score = 26.2 bits (56), Expect = 0.11, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 8 IPLLFSILNYSTGLQQKKFSERPNNSGNIWAVLVAGSN 45
IPL+ ++N ++KK E +SG W VL G N
Sbjct: 590 IPLMGVMMNGDE--KKKKLMELSYDSGKKWQVLCGGEN 625
>M.Javanica_Scaff3809g031293 on XP_001610714 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1231
Score = 25.0 bits (53), Expect = 0.25, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 17 YSTGLQQKKFSERPNNSGNIWAVL 40
Y TGLQ+K PNN I +L
Sbjct: 379 YFTGLQKKTIPTTPNNPKTIREIL 402
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7g000193
(310 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_821294 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.9
XP_814969 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.3
XP_821397 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 3.7
XP_816764 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.1
XP_821137 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.3
XP_821388 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.6
XP_804826 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 8.3
>M.Javanica_Scaff7g000193 on XP_821294 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 776
Score = 26.9 bits (58), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 80 FLYKV--SGENNGEQMLFPMKRRLDGGLSEHRLVAI 113
LYK SG NN E+++ P +++ GG S +V++
Sbjct: 424 LLYKSAGSGNNNNERLIAPYEKKKGGGESSLGMVSV 459
>M.Javanica_Scaff7g000193 on XP_814969 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 258
Score = 26.2 bits (56), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 151 CCLKNNEKPDQGVIGDHYNAATGPILVEDSRTLVIQKFSLEANKAPDAWIFAGKG 205
+ P G++G NAA+G ++D R+ + + A K D + F G G
Sbjct: 14 ASFSASSTPTAGLVGLLSNAASGDTWIDDYRS--VNAKVMNAVKVHDGFKFTGFG 66
>M.Javanica_Scaff7g000193 on XP_821397 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 932
Score = 25.8 bits (55), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 11/44 (25%), Positives = 22/44 (50%)
Query: 70 ISEEAVEPVKFLYKVSGENNGEQMLFPMKRRLDGGLSEHRLVAI 113
+S++ LYK G N E+++ +++ G S H L ++
Sbjct: 409 VSDDDAAASSLLYKSDGSGNNEELIALYEKKKGDGESSHSLWSV 452
>M.Javanica_Scaff7g000193 on XP_816764 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 868
Score = 25.0 bits (53), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 80 FLYKV--SGENNGEQMLFPMKRRLDGGLSEHRLVAI 113
LYK SG+NN E+++ +++ +GG H L ++
Sbjct: 421 LLYKSAESGDNNDEKLIALYEKKKNGGKPSHSLWSV 456
>M.Javanica_Scaff7g000193 on XP_821137 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 956
Score = 25.0 bits (53), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 70 ISEEAVEPVKFLYKVSGENNGEQMLFPMKRRLDGG-LSEHRLVAI 113
+S++ LYK+ G NN E+++ +++ DGG + H L ++
Sbjct: 431 VSDDDAASSALLYKI-GNNNEEELIALYEKKKDGGDKTSHSLWSV 474
>M.Javanica_Scaff7g000193 on XP_821388 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 907
Score = 25.0 bits (53), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 70 ISEEAVEPVKFLYKV--SGENNGEQMLFPMKRRLDGGLSEHRLVAI 113
+S++ V LYK SG+N E+++ +++ G S H L ++
Sbjct: 416 VSDDDVAASSLLYKSAGSGDNKKEELIVLYEKKKGDGESSHSLWSV 461
>M.Javanica_Scaff7g000193 on XP_804826 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 720
Score = 24.6 bits (52), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 151 CCLKNNEKPDQGVIGDHYNAATGPILVEDSRTLVIQKFSLEANKAPDAWIFAGKGDV 207
+ P G++G NAA+G ++D L + +A K + + F G G +
Sbjct: 480 ASFSKSSTPTAGLVGFLSNAASGDTWIDD--YLCVNATVTKATKVENGFKFTGPGSM 534
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4319g033987
(100 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Q4U925 Casein kinase II alpha (Establishment) [Theileria annu... 33 0.001
XP_821438 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.55
XP_818092 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.81
XP_820499 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.8
XP_001348015 AMA-1 (Invasion) [Plasmodium falciparum] 23 3.5
XP_001609539 variant erythrocyte surface antigen-1, beta subuni... 23 3.8
XP_815156 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.9
XP_001348275 RAP1 (Invasion) [Plasmodium falciparum] 23 6.7
XP_818353 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 7.1
>M.Javanica_Scaff4319g033987 on Q4U925 Casein kinase II alpha (Establishment) [Theileria
annulata]
Length = 348
Score = 33.1 bits (74), Expect = 0.001, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 11 IADCYKIKRKIGSGSFGEIFSAINLQTGEE 40
+ D Y+I RKIG G F E+F +N T ++
Sbjct: 51 VPDSYEIVRKIGRGKFSEVFEGLNTVTKDK 80
>M.Javanica_Scaff4319g033987 on XP_821438 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 957
Score = 25.8 bits (55), Expect = 0.55, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Query: 5 GTNDFVIADCYKIKRKIGSGSFGEIFSAINLQTGEEVAVKMEHIHKRRRRVEQLEE 60
G++ F +A+ K+ G G F I S + TGE+ E + K + + + LEE
Sbjct: 103 GSDVFAVAEAQDTKK--GEGGFTGIASKLLAWTGEQTK---EELDKTKLKTQVLEE 153
>M.Javanica_Scaff4319g033987 on XP_818092 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 884
Score = 25.0 bits (53), Expect = 0.81, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 5 GTNDFVIADCYKIKRKIGSGSFGEIFSAINLQTGEEVAVKMEHIHKRRRRVEQLEED 61
G++ F +A+ K K K G GSF I S + +T E+ + K + + LEED
Sbjct: 100 GSDVFAVAEA-KNKEKNGQGSFTGIASQLLTETEEKKDNTPVEVLKDPKDTKFLEED 155
>M.Javanica_Scaff4319g033987 on XP_820499 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 654
Score = 24.3 bits (51), Expect = 1.8, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Query: 18 KRKIGSGSFGEIFSAINLQTGEEVAVKMEHIHKRRRRVEQLEE 60
K+ G GSF I S + TGE E + K + + + LEE
Sbjct: 117 KKDTGEGSFTGIASGLLTLTGEN---PKEELDKTKLKTQVLEE 156
>M.Javanica_Scaff4319g033987 on XP_001348015 AMA-1 (Invasion) [Plasmodium falciparum]
Length = 622
Score = 23.5 bits (49), Expect = 3.5, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 44 KMEHIHKRRRRVEQLEEDVLCS 65
+M H +K + V+ L+E LCS
Sbjct: 197 EMRHFYKDNKYVKNLDELTLCS 218
>M.Javanica_Scaff4319g033987 on XP_001609539 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 884
Score = 23.1 bits (48), Expect = 3.8, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 5 GTNDFVIADCYKIKRKIGSGSFGEIFSAINLQTG 38
G F+ A Y ++R GSGS GE ++ TG
Sbjct: 271 GLGSFMAAMGYDLERLNGSGSKGEYCLGLSGNTG 304
>M.Javanica_Scaff4319g033987 on XP_815156 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 966
Score = 23.1 bits (48), Expect = 4.9, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 18 KRKIGSGSFGEIFSAINLQTGEEVAVKMEHIHKRRRRVEQLEE 60
K++ G GSF I S + TGE+ E + K + + + LE+
Sbjct: 116 KKEAGEGSFTGIASELLTLTGEK---PKEELDKSKLKTQVLEK 155
>M.Javanica_Scaff4319g033987 on XP_001348275 RAP1 (Invasion) [Plasmodium falciparum]
Length = 782
Score = 22.7 bits (47), Expect = 6.7, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 16 KIKRKIGSGSFGEIFSAINLQTGEEVAVKME 46
++K + +GSF FS +N +EV K E
Sbjct: 285 QVKERNVAGSFSRFFSKLNPFKKDEVIEKTE 315
>M.Javanica_Scaff4319g033987 on XP_818353 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 903
Score = 22.3 bits (46), Expect = 7.1, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 9 FVIADCYKIKRKIGSGSFGEIFSAINLQTGEEVAVKMEHIHKRRRRVEQLEED 61
F +A+ K++ GSF I S + TGE+ +++++ + +E+ D
Sbjct: 101 FAVAEAEDTKKE--EGSFTGIASELLALTGEQASMELDKAKLNTQLLEKCSSD 151
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5216g038397
(235 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_815845 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.27
XP_812339 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.34
XP_817003 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.4
XP_820663 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.0
XP_001350935 PfEMP1 (Establishment) [Plasmodium falciparum] 25 5.3
XP_804542 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 5.9
XP_965997 PfEMP1 (Establishment) [Plasmodium falciparum] 25 7.3
>M.Javanica_Scaff5216g038397 on XP_815845 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 936
Score = 28.9 bits (63), Expect = 0.27, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
Query: 141 LWGKKKKEVMERYENALATGIDESRKWKDWERLIIDMCKNNGGEEETP--NRKRPIEEQF 198
LW E ++R ++ LAT WK + L+ ++C + +++ P N P ++
Sbjct: 458 LWSVLLTEQLQRVKDVLAT-------WKTVDDLVSELCPSENAKKDAPTENACSPTDKIT 510
Query: 199 LALANYQSNNSNKN 212
L + S N ++N
Sbjct: 511 AGLVGFLSGNFSEN 524
>M.Javanica_Scaff5216g038397 on XP_812339 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 949
Score = 28.5 bits (62), Expect = 0.34, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 9/74 (12%)
Query: 141 LWGKKKKEVMERYENALATGIDESRKWKDWERLIIDMCKNNGGEEETP--NRKRPIEEQF 198
LW E ++R ++ LAT WK + L+ +C + E TP N P +
Sbjct: 454 LWSVLLTEQLQRVKDVLAT-------WKKVDDLVSKLCTTSSAVESTPSENACSPTVKIT 506
Query: 199 LALANYQSNNSNKN 212
L + S+N ++N
Sbjct: 507 AGLVGFLSDNFSEN 520
>M.Javanica_Scaff5216g038397 on XP_817003 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 931
Score = 25.4 bits (54), Expect = 3.4, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 21/48 (43%), Gaps = 7/48 (14%)
Query: 141 LWGKKKKEVMERYENALATGIDESRKWKDWERLIIDMCKNNGGEEETP 188
LW + E ++R + L T WK + + +C + E+TP
Sbjct: 450 LWSVRLTEQLQRVKEVLTT-------WKKVDERVFQLCPSESALEDTP 490
>M.Javanica_Scaff5216g038397 on XP_820663 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 928
Score = 25.4 bits (54), Expect = 4.0, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 7/46 (15%)
Query: 141 LWGKKKKEVMERYENALATGIDESRKWKDWERLIIDMCKNNGGEEE 186
LW + ++R ++ LAT WK + L+ ++C + EE+
Sbjct: 457 LWSVRLTAQLQRVKDVLAT-------WKKVDDLVSELCPSKSAEED 495
>M.Javanica_Scaff5216g038397 on XP_001350935 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2268
Score = 25.0 bits (53), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 7/75 (9%)
Query: 9 IGLFNRINVNEAECIKCKEDGAFKYIFKLPYRNLKGLFAHVRSKIHKDTEICKYFEQLMA 68
+G F R+ NE C + G K P KG S+ TEIC+ A
Sbjct: 445 VGEFLRLLNNEKTCKDQPQVGNEK---ASPVDFTKGKTKETFSR----TEICEPCPWCGA 497
Query: 69 EQDRTGVSNWTELEL 83
E+D TG W + EL
Sbjct: 498 EKDNTGNGKWKDKEL 512
Score = 24.6 bits (52), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 42 LKG--LFAHVRSKIHKDTEICKYFEQLMAEQDRTGV 75
LKG L +++ +H DTE KY + L+ +++ GV
Sbjct: 700 LKGGNLLQNIKD-VHGDTEDIKYIKDLLNDEEAAGV 734
>M.Javanica_Scaff5216g038397 on XP_804542 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 813
Score = 24.6 bits (52), Expect = 5.9, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 7/42 (16%)
Query: 148 EVMERYENALATGIDESRKWKDWERLIIDMCKNNGGEEETPN 189
E ++R ++ LAT WK+ + L+ +C + E++ PN
Sbjct: 482 EQLKRVKDVLAT-------WKEVDDLVSKLCTPSNTEKDRPN 516
>M.Javanica_Scaff5216g038397 on XP_965997 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2879
Score = 24.6 bits (52), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 207 NNSNKNGSNMDEIAQTSSNLGW 228
NN+ K S+++E AQTS L W
Sbjct: 1464 NNAKKGDSSLEEFAQTSQFLRW 1485
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4732g036056
(341 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5741g040819
(322 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_806299 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 3.2
>M.Javanica_Scaff5741g040819 on XP_806299 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1047
Score = 26.2 bits (56), Expect = 3.2, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 18/40 (45%)
Query: 19 SEGAPKKRKGETSGQQTQGNANYFEGGSSSSPALTLVPPT 58
S P K ET + N ++ EGG SS + VP T
Sbjct: 937 SSPTPSKSGAETKSAENTDNISWSEGGEFSSEDVEEVPQT 976
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff25383g090817
(163 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350797 PfEMP1 (Establishment) [Plasmodium falciparum] 25 3.6
>M.Javanica_Scaff25383g090817 on XP_001350797 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2287
Score = 24.6 bits (52), Expect = 3.6, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 8/52 (15%)
Query: 105 RKFSKTQDQDYTPRPRLHPKTKTQDQDLTPRLKTKNYQDSRQFLGSISQIFG 156
++++ T DY R L QDL PR+ N + + L + I+G
Sbjct: 1596 KQYNVTDSNDYNVRSFL--------QDLIPRIALTNDKKHFKTLDDLENIYG 1639
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff31330g098561
(311 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_808179 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 7.2
AAK31234 variable surface protein 21a (Establishment) [Giardi... 24 7.6
XP_819344 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 7.9
AAK31226 variable surface protein 7c (Establishment) [Giardia... 24 9.3
>M.Javanica_Scaff31330g098561 on XP_808179 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 942
Score = 25.0 bits (53), Expect = 7.2, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 16 ESPEGSNATQDEIVCGIIRSKLP-SEALETLIGWEEDEHAVWTLGELRNGLGRLV 69
E+ S A ++I GI+ K E I W+E + TLGE N L RL+
Sbjct: 185 ENAAESKAKSEKIKSGILLVKGEVGEGGNNRIHWKETDGLPCTLGEHHNTLKRLI 239
>M.Javanica_Scaff31330g098561 on AAK31234 variable surface protein 21a (Establishment) [Giardia
duodenalis]
Length = 165
Score = 24.3 bits (51), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 8/46 (17%)
Query: 141 PLEEYGCSLCHTGSTHKPSRCLMFNSRNRRRARLLEQGRCLNCLYD 186
P GCS C+ G T + ++CL L +C C D
Sbjct: 56 PACAEGCSACNAGQTQQCTKCL--------AGYYLSNSKCFKCTAD 93
>M.Javanica_Scaff31330g098561 on XP_819344 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 861
Score = 24.6 bits (52), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 23 ATQDEIVCGI--IRSKLPSEALETLIGWEEDEHAVWTLGELRNGLGRLV 69
A ++I GI ++ ++ SEA I W+E + TLG+ N L +L+
Sbjct: 195 AETEKIKSGILLVKGEVSSEADNKQIHWKETDGVPCTLGDQHNSLSQLI 243
>M.Javanica_Scaff31330g098561 on AAK31226 variable surface protein 7c (Establishment) [Giardia
duodenalis]
Length = 163
Score = 23.9 bits (50), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 8/46 (17%)
Query: 141 PLEEYGCSLCHTGSTHKPSRCLMFNSRNRRRARLLEQGRCLNCLYD 186
P GCS C G+T + ++C L +CL C D
Sbjct: 54 PACAEGCSACSNGNTQQCTKCF--------AGYYLSNSKCLKCTAD 91
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff27530g093864
(197 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_951757 VSG (Establishment) [Trypanosoma brucei] 25 3.0
XP_001352240 PfEMP1 (Establishment) [Plasmodium falciparum] 24 6.1
XP_965999 PfEMP1 (Establishment) [Plasmodium falciparum] 24 8.4
>M.Javanica_Scaff27530g093864 on XP_951757 VSG (Establishment) [Trypanosoma brucei]
Length = 476
Score = 25.0 bits (53), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 17/25 (68%), Gaps = 3/25 (12%)
Query: 129 VRNMIERSFGKDGSA---EVWIGLK 150
++N++E S+GKD + +W G+K
Sbjct: 315 IKNIVESSYGKDPTTYEETIWKGVK 339
>M.Javanica_Scaff27530g093864 on XP_001352240 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1315
Score = 24.3 bits (51), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 46/128 (35%), Gaps = 27/128 (21%)
Query: 17 FSYTTEAYF-GCNCQYPNNHYVPWYLSGNVENRLTFLERQTSQKINMLIARIEALERELG 75
F T E + C C+ PN P N EN+ + R + +
Sbjct: 455 FEITPEKFKKACKCKIPN----PLEKCPNEENK-------------NVCTRFDKVYSCTS 497
Query: 76 LIHRISMQEWNNSGAGNIYKIFNTSKTWEEAKNTCMTFGARLASIDSDYK----NAFVRN 131
L + + EWNNSG N N +N C+ ++ DYK N F +
Sbjct: 498 LSFKNDLSEWNNSGVKNKENDNNGVLVPPRRRNLCINLFSK-----KDYKMKDENDFKED 552
Query: 132 MIERSFGK 139
++ +F +
Sbjct: 553 LLNAAFSQ 560
>M.Javanica_Scaff27530g093864 on XP_965999 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1325
Score = 23.9 bits (50), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 42/118 (35%), Gaps = 26/118 (22%)
Query: 26 GCNCQYPNNHYVPWYLSGNVENRLTFLERQTSQKINMLIARIEALERELGLIHRISMQEW 85
C C+ PN P N EN+ + R + + L + + EW
Sbjct: 475 ACKCKIPN----PLEKCPNEENK-------------NVCTRFDKVSSCTSLFFKNDLIEW 517
Query: 86 NNSGAGNIYKIFNTSKTWEEAKNTCMTFGARLASIDSDYK----NAFVRNMIERSFGK 139
NNSG N N +N C+ ++ DYK N F +++ +F +
Sbjct: 518 NNSGVKNKENDNNGVLVPPRRRNLCINLFSK-----KDYKMKDENDFKEDLLNAAFSQ 570
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff495g006909
(75 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_829797 VSG (Establishment) [Trypanosoma brucei] 23 3.5
XP_001347690 PfEMP1 (Establishment) [Plasmodium falciparum] 22 6.6
XP_815188 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 8.6
>M.Javanica_Scaff495g006909 on XP_829797 VSG (Establishment) [Trypanosoma brucei]
Length = 509
Score = 22.7 bits (47), Expect = 3.5, Method: Composition-based stats.
Identities = 11/43 (25%), Positives = 18/43 (41%)
Query: 24 LCKDGCTILCSDCAGNCSNLVTCESYKGLFASVRKRCAKLGFN 66
+ KDG + CAG +T GL ++ ++G N
Sbjct: 257 MTKDGFEEIVKHCAGPAKTHLTSSLLMGLITKIKNLIRRVGAN 299
>M.Javanica_Scaff495g006909 on XP_001347690 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 21.9 bits (45), Expect = 6.6, Method: Composition-based stats.
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 46 CESYKGLFASVRKRCAK 62
C+ KG+ +++K C K
Sbjct: 1244 CKKRKGMLENIKKECMK 1260
>M.Javanica_Scaff495g006909 on XP_815188 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 862
Score = 21.6 bits (44), Expect = 8.6, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 37 AGNCSNLVTCESYKGLFASVRKR 59
+GN SN E Y G+ A+V+K+
Sbjct: 506 SGNFSNDTWREEYLGVNATVKKK 528
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2749g024989
(101 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_810574 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.20
XP_001349030 PfEMP1 (Establishment) [Plasmodium falciparum] 25 0.94
XP_001609033 variant erythrocyte surface antigen-1, alpha subun... 24 2.3
XP_812044 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.9
XP_001347288 PfEMP1 (Establishment) [Plasmodium falciparum] 23 3.3
XP_813679 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.2
XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum] 23 6.6
XP_001351221 CTRP (Adhesin) [Plasmodium falciparum] 22 9.2
>M.Javanica_Scaff2749g024989 on XP_810574 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 954
Score = 26.9 bits (58), Expect = 0.20, Method: Composition-based stats.
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 8 ITPISKKPTPTTAITTYKPP 27
I P +KP P A+TT PP
Sbjct: 725 IPPPERKPVPAKALTTTSPP 744
>M.Javanica_Scaff2749g024989 on XP_001349030 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 25.0 bits (53), Expect = 0.94, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 34 DQCKLFNNPELIERYACNCADLS 56
D+ K+ + P ++ Y CNCAD S
Sbjct: 1566 DKKKIKDLPAFLKLYGCNCADNS 1588
>M.Javanica_Scaff2749g024989 on XP_001609033 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1270
Score = 23.9 bits (50), Expect = 2.3, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 13 KKPTPTTAITTYKPPTSFAP 32
K P PTT T ++P T+ P
Sbjct: 812 KTPKPTTCPTCHQPTTTGVP 831
>M.Javanica_Scaff2749g024989 on XP_812044 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 855
Score = 23.5 bits (49), Expect = 2.9, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 15 PTPTTAITTYKPPTSFAPLDQCKL 38
PT TAI KP ++ AP Q K+
Sbjct: 747 PTEMTAIKDRKPVSTRAPEPQVKI 770
>M.Javanica_Scaff2749g024989 on XP_001347288 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2241
Score = 23.5 bits (49), Expect = 3.3, Method: Composition-based stats.
Identities = 8/12 (66%), Positives = 9/12 (75%)
Query: 26 PPTSFAPLDQCK 37
P T+F PLD CK
Sbjct: 1408 PETTFGPLDYCK 1419
>M.Javanica_Scaff2749g024989 on XP_813679 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 823
Score = 22.7 bits (47), Expect = 5.2, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 13/27 (48%)
Query: 16 TPTTAITTYKPPTSFAPLDQCKLFNNP 42
T TAI KP AP Q K+ NP
Sbjct: 716 TEMTAIKDRKPVPKRAPEPQVKIVPNP 742
>M.Javanica_Scaff2749g024989 on XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2238
Score = 22.7 bits (47), Expect = 6.6, Method: Composition-based stats.
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 37 KLFNNPELIERYACN 51
KLF NP+ + ACN
Sbjct: 848 KLFQNPQQFKEVACN 862
>M.Javanica_Scaff2749g024989 on XP_001351221 CTRP (Adhesin) [Plasmodium falciparum]
Length = 2112
Score = 22.3 bits (46), Expect = 9.2, Method: Composition-based stats.
Identities = 10/18 (55%), Positives = 13/18 (72%), Gaps = 3/18 (16%)
Query: 34 DQCKLFNNPELIERYACN 51
D+CKLFN+ E+ ACN
Sbjct: 1625 DKCKLFNSTEM---EACN 1639
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3692g030621
(379 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_827741 VSG (Establishment) [Trypanosoma brucei] 27 2.0
XP_813188 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.1
XP_815234 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.7
XP_812850 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.7
XP_805135 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 4.3
XP_810614 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 4.5
XP_807804 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 4.6
XP_819719 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 5.6
XP_807433 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.6
XP_804086 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 7.0
>M.Javanica_Scaff3692g030621 on XP_827741 VSG (Establishment) [Trypanosoma brucei]
Length = 514
Score = 26.9 bits (58), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/112 (21%), Positives = 41/112 (36%), Gaps = 14/112 (12%)
Query: 232 PNVLGDPTYTKELNMAYRESYVFKFRDRIGVRFSCEIKLCVKAENGCDGITP-------P 284
P DP T EL A D + + GCDG +P P
Sbjct: 270 PKARDDPVTTTELETALNNLLALIHTDGTHEYLGAYV------QTGCDGTSPNGICVQFP 323
Query: 285 DCQNDREENSNNIHFQNSLDDSSIENIKNITNNYNNQSLITPRNRIRKHRSV 336
D E + + ++ + I+N+K + NN + + + +KHR++
Sbjct: 324 DLATSAPEVATRDTWLATVAEI-IQNLKILENNQAKAEYVNNQIKDKKHRAL 374
>M.Javanica_Scaff3692g030621 on XP_813188 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1002
Score = 26.9 bits (58), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/90 (20%), Positives = 39/90 (43%), Gaps = 6/90 (6%)
Query: 284 PDCQNDREENSNNIHFQNSLDDSSIENIKNITNNYNNQSLITPRNRIRKHRSVNTKVVDA 343
P + + +S HF++ + SS+ ++ +T + TP+ + + R ++ + DA
Sbjct: 793 PQKARETDVSSGEDHFESEQEHSSLSVVQPMTEQAEEVVVATPQRKTTEERPQHSTLSDA 852
Query: 344 ------DLFSQYVFVLDEPVVGEDEKEENN 367
F DE V +E+++ N
Sbjct: 853 SEDVEESSFHSAPLTSDEQTVDPEERKDTN 882
>M.Javanica_Scaff3692g030621 on XP_815234 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1032
Score = 26.6 bits (57), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 25/56 (44%)
Query: 315 TNNYNNQSLITPRNRIRKHRSVNTKVVDADLFSQYVFVLDEPVVGEDEKEENNYLN 370
T Y+ S + +R R V V A + Q V ++ PV E +K+E L+
Sbjct: 334 TEEYDTLSRVWGNSRTRVGHGVQGGFVSAMIDGQKVILVSRPVYSEKDKKETGRLH 389
>M.Javanica_Scaff3692g030621 on XP_812850 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1032
Score = 26.6 bits (57), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 25/56 (44%)
Query: 315 TNNYNNQSLITPRNRIRKHRSVNTKVVDADLFSQYVFVLDEPVVGEDEKEENNYLN 370
T Y+ S + +R R V V A + Q V ++ PV E +K+E L+
Sbjct: 334 TEEYDTLSRVWGNSRTRVGHGVQGGFVSAMIDGQKVILVSRPVYSEKDKKETGRLH 389
>M.Javanica_Scaff3692g030621 on XP_805135 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 553
Score = 25.8 bits (55), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 24/56 (42%)
Query: 315 TNNYNNQSLITPRNRIRKHRSVNTKVVDADLFSQYVFVLDEPVVGEDEKEENNYLN 370
T Y+ S + +R R V A + Q V ++ PV E +K+E L+
Sbjct: 337 TEEYDTLSRVWGNSRTRVGHGAQGGFVSAMIDGQKVILVSRPVYSEKDKKETGRLH 392
>M.Javanica_Scaff3692g030621 on XP_810614 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 728
Score = 25.8 bits (55), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 11/68 (16%)
Query: 117 LFVTKTDRAFHINCMYREDSQTLDSEMTVGDVTPANILHNELPLPQCQYTIRKDNINGEL 176
L+VT +R FHI ++ ED+ V + +N+L+++ L + + N G
Sbjct: 400 LWVTDNNRTFHIGPLFGEDN--------VNETFSSNLLYSDGALHLLK---ERANEKGSA 448
Query: 177 LKFSRVGD 184
+ +R+ D
Sbjct: 449 ISLARLTD 456
>M.Javanica_Scaff3692g030621 on XP_807804 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1054
Score = 25.8 bits (55), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/127 (19%), Positives = 54/127 (42%), Gaps = 13/127 (10%)
Query: 244 LNMAYRESYVFKFRDRIGVRFSCEIKLCVKAENGCDGITPPDCQNDREENSNNIHFQNSL 303
+ +A + S+ ++F D C ++ E+G D + C E+ S +++ +++
Sbjct: 277 VALAEKSSFGWEFSDATS-DDGCIQPAVLEWEDG-DLVMMTSC----EDGSRRVYWSSAM 330
Query: 304 DDSSIENIKNITNNYNNQSLITPRNRIRKHRSVNTKVVDADLFSQYVFVLDEPVVGEDEK 363
+E ++ + N + R V V A + Q V ++ +PV E +K
Sbjct: 331 GSWWMEEYDTLSRVWGN-------SLKRTGHGVQGGFVSATIDGQRVILVSQPVYSEKDK 383
Query: 364 EENNYLN 370
+E L+
Sbjct: 384 KETGRLH 390
>M.Javanica_Scaff3692g030621 on XP_819719 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1053
Score = 25.8 bits (55), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 25/127 (19%), Positives = 54/127 (42%), Gaps = 13/127 (10%)
Query: 244 LNMAYRESYVFKFRDRIGVRFSCEIKLCVKAENGCDGITPPDCQNDREENSNNIHFQNSL 303
+ +A + S+ ++F D C ++ E+G D + C E+ S +++ +++
Sbjct: 276 VALAEKSSFGWEFSDATS-DDGCIQPAVLEWEDG-DLVMMTSC----EDGSRRVYWSSAM 329
Query: 304 DDSSIENIKNITNNYNNQSLITPRNRIRKHRSVNTKVVDADLFSQYVFVLDEPVVGEDEK 363
+E ++ + N + R V V A + Q V ++ +PV E +K
Sbjct: 330 GSWWMEEYDTLSRVWGN-------SLKRTGHGVQGGFVSATIDGQRVILVSQPVYSEKDK 382
Query: 364 EENNYLN 370
+E L+
Sbjct: 383 KETGRLH 389
>M.Javanica_Scaff3692g030621 on XP_807433 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1042
Score = 25.4 bits (54), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 24/56 (42%)
Query: 315 TNNYNNQSLITPRNRIRKHRSVNTKVVDADLFSQYVFVLDEPVVGEDEKEENNYLN 370
T Y+ S + +R R V A + Q V ++ PV E +K+E L+
Sbjct: 337 TEEYDTLSRVWGNSRTRVGHGAQGGFVSAMIDGQKVILVSRPVYSEKDKKETGRLH 392
>M.Javanica_Scaff3692g030621 on XP_804086 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 742
Score = 25.4 bits (54), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 24/56 (42%)
Query: 315 TNNYNNQSLITPRNRIRKHRSVNTKVVDADLFSQYVFVLDEPVVGEDEKEENNYLN 370
T Y+ S + +R R V A + Q V ++ PV E +K+E L+
Sbjct: 38 TEEYDTLSRVWGNSRTRVGHGAQGGFVSAMIDGQKVILVSRPVYSEKDKKETGRLH 93
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5194g038307
(116 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum] 25 1.7
XP_001609040 variant erythrocyte surface antigen-1, alpha subun... 24 2.9
XP_001349219 PfEMP1 (Establishment) [Plasmodium falciparum] 23 4.7
>M.Javanica_Scaff5194g038307 on XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3119
Score = 24.6 bits (52), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 10/50 (20%)
Query: 76 TDRGKDKVFNKNKYFKEYYQKNKER----------MLEKGRNYRKQNKED 115
T+RG K N Y+K++Y K KE+ +L +GR +KQ E+
Sbjct: 397 TNRGIPKSSINNGYYKDFYNKLKEKTYNTVDEFINLLNEGRYCKKQKPEE 446
>M.Javanica_Scaff5194g038307 on XP_001609040 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1335
Score = 23.9 bits (50), Expect = 2.9, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 42 VNKILNDGAESSVKPQNQKIKETLKPKLKITKKD 75
V +IL +G E +K + ++ K+TL K+T +
Sbjct: 782 VLEILKEGVEKQIKEEAKEAKKTLDVFFKLTNDE 815
>M.Javanica_Scaff5194g038307 on XP_001349219 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2595
Score = 23.5 bits (49), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 83 VFNKNKYFKEYYQKNKERMLEKGRN 107
V+N+ K YY K+ E++LE +N
Sbjct: 1796 VYNEAKQLSRYYAKDNEKILEAIKN 1820
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff8044g050464
(59 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_807358 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.1
>M.Javanica_Scaff8044g050464 on XP_807358 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 872
Score = 21.6 bits (44), Expect = 5.1, Method: Composition-based stats.
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 2 ALAEKAINEVSSPFKNWFDRDTR 24
ALAEKA + SSP ++ RD +
Sbjct: 130 ALAEKAPGQESSPSSSFGWRDAK 152
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff532g007287
(149 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6833g045658
(214 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609935 variant erythrocyte surface antigen-1, alpha subun... 25 4.7
XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum] 25 4.8
XP_818221 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 5.8
XP_001609034 variant erythrocyte surface antigen-1, alpha subun... 24 9.3
>M.Javanica_Scaff6833g045658 on XP_001609935 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1317
Score = 25.0 bits (53), Expect = 4.7, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 26 GSVCCEVLSGDPNNPNYNPAS 46
G C +VL+ + NPNY PA+
Sbjct: 888 GFSCQKVLNDEKENPNYPPAA 908
>M.Javanica_Scaff6833g045658 on XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3346
Score = 25.0 bits (53), Expect = 4.8, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 4/27 (14%)
Query: 127 PPNYGNQ---PL-MNNYPPSYNNFPPN 149
PPN Q PL + ++PP + N PPN
Sbjct: 2239 PPNPDTQTDTPLPLESFPPPFCNVPPN 2265
>M.Javanica_Scaff6833g045658 on XP_818221 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 748
Score = 24.6 bits (52), Expect = 5.8, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 29/65 (44%)
Query: 61 PQTNNRPNTGTFPGYYPPGQQFPPQTYYPPQQQYNQPPVIIVINNPGSGAGYSYNIPPNY 120
P+T+NR G G++ PQ + ++ +N +++++ AG S + N
Sbjct: 11 PRTHNRRRVTGSSGRRREGRESEPQRPHMSRRFFNSAVLLLLVVMMCCSAGASNAVTSNS 70
Query: 121 GTGYL 125
G L
Sbjct: 71 GNAQL 75
>M.Javanica_Scaff6833g045658 on XP_001609034 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1313
Score = 23.9 bits (50), Expect = 9.3, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 26 GSVCCEVLSGDPNNPNYNPAS 46
G C EVL+ + NP Y PA+
Sbjct: 863 GFSCSEVLNDEKENPVYPPAA 883
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3528g029650
(121 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3577g029919
(256 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_816821 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 7.4
>M.Javanica_Scaff3577g029919 on XP_816821 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 782
Score = 24.6 bits (52), Expect = 7.4, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 14/28 (50%)
Query: 229 ENVRGLCQCSAGAGVKGLGSVCSKIKIT 256
E V LC S A G+ CS +KIT
Sbjct: 486 ERVSKLCLTSRAAVSASTGNACSAVKIT 513
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3161g027515
(77 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_821162 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.10
XP_802557 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.50
>M.Javanica_Scaff3161g027515 on XP_821162 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 787
Score = 26.9 bits (58), Expect = 0.10, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 2 SICFSSLPMASVEIFAATDICCYPDKSPVDSPRGVPQNPARSAG 45
++C + P+ E+ A D P ++P GVPQ A SAG
Sbjct: 674 NVCLYNRPLNPTEMTAIKDRKPVPKRAPEPQAGGVPQTIA-SAG 716
>M.Javanica_Scaff3161g027515 on XP_802557 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 608
Score = 25.0 bits (53), Expect = 0.50, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 25 PDKSPVDSPRGVPQNPARSAG 45
P +P + PR VP+ P R G
Sbjct: 556 PIPNPGEEPRSVPEIPPRPTG 576
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff710g009151
(130 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_966151 TLP (Invasion) [Plasmodium falciparum] 24 4.8
>M.Javanica_Scaff710g009151 on XP_966151 TLP (Invasion) [Plasmodium falciparum]
Length = 1371
Score = 23.9 bits (50), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 37 TAPIYAYNHGIIDEEFWNLYGHRCCNGCV 65
PIY+ ++ DEE+ + +GH+ N
Sbjct: 1277 VTPIYSKDYDADDEEYEHWHGHQRDNKST 1305
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff31107g098307
(250 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349035 PfEMP1 (Establishment) [Plasmodium falciparum] 30 0.17
XP_806541 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.6
>M.Javanica_Scaff31107g098307 on XP_001349035 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2239
Score = 29.6 bits (65), Expect = 0.17, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 30/73 (41%), Gaps = 10/73 (13%)
Query: 172 FELEPKHLDDCANPRRQLHRMPTTLTVRRSFAVYNNGEVGFSVVNISISGAPC------E 225
FE EP+ L NP + HR T T RS+ E FS V+ G C +
Sbjct: 54 FENEPEGLQTQGNPCQLDHRYHTNATNVRSYPCRAGKEERFSQVH----GGECDKNKIRD 109
Query: 226 NRGFRVLNCDKFR 238
N RV C FR
Sbjct: 110 NEDDRVGACAPFR 122
>M.Javanica_Scaff31107g098307 on XP_806541 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 753
Score = 24.6 bits (52), Expect = 6.6, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 34 ILPLVIYPDSDSLLDILSDELSIPPLINP 62
+LP++IY D +LS+++S NP
Sbjct: 252 VLPMIIYSTDDGSTWLLSEDISPANCFNP 280
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2909g026009
(216 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350415 PfEMP1 (Establishment) [Plasmodium falciparum] 27 1.6
XP_001350936 PfEMP1 (Establishment) [Plasmodium falciparum] 24 9.2
>M.Javanica_Scaff2909g026009 on XP_001350415 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3056
Score = 26.6 bits (57), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 95 YGGKTNGSTNDCTLPNGQKVQKAIRKEIRLLTE 127
YGG++N ND QK++ AI+KE LL E
Sbjct: 1273 YGGRSN-IKNDTKESLKQKIKNAIQKETELLYE 1304
>M.Javanica_Scaff2909g026009 on XP_001350936 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2163
Score = 23.9 bits (50), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 8/43 (18%)
Query: 138 RIMKNNGDYDYFAALHRDAVGTGCAHGGQAFAGWHRELTKRFE 180
RI+ N D FA +H D + T ++G R L KR++
Sbjct: 221 RIILENNLKDIFAKIHSDVMSTSGSNG--------RALQKRYK 255
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff26328g092206
(73 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff8018g050357
(53 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4225g033502
(152 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351221 CTRP (Adhesin) [Plasmodium falciparum] 23 7.6
>M.Javanica_Scaff4225g033502 on XP_001351221 CTRP (Adhesin) [Plasmodium falciparum]
Length = 2112
Score = 23.5 bits (49), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 4/27 (14%)
Query: 9 ILIFSSIIFFLPSFI----YSSNKTTN 31
+LIFS + FLP I Y+ N+ TN
Sbjct: 6 VLIFSCFLLFLPLHIVRTHYAKNEETN 32
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2850g025607
(391 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAD92130 TashHN (Establishment) [Theileria annulata] 27 1.6
XP_001609666 variant erythrocyte surface antigen-1, alpha subun... 27 1.8
XP_001351561 PfEMP1 (Establishment) [Plasmodium falciparum] 25 7.1
XP_001348946 PfEMP1 (Establishment) [Plasmodium falciparum] 25 7.1
XP_001349533 PfEMP3 (Establishment) [Plasmodium falciparum] 25 7.4
XP_001611736 variant erythrocyte surface antigen-1, alpha subun... 25 8.6
XP_001610568 variant erythrocyte surface antigen-1, alpha subun... 25 8.9
>M.Javanica_Scaff2850g025607 on CAD92130 TashHN (Establishment) [Theileria annulata]
Length = 332
Score = 27.3 bits (59), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 80/170 (47%), Gaps = 19/170 (11%)
Query: 212 KTVSPTTESS-TSPITEEIINSTETAEIKVTENATEASEE-QQPTSTVSSSINVSEGTEQ 269
K V+P+ E + TS TEEI+ + + E T + E TS++S +I+ S G +
Sbjct: 178 KYVTPSNEDTETSSETEEIL------KFRYNERPTHSREHTGHTTSSLSDTISNSSGLQV 231
Query: 270 SVKVEEEKKEASKTEETNNVSVISETEKPEIETIKNAAENKEATEQPKIDINQEKP--KN 327
V +E K+ + + + V E +PEI ++ ++++ ++P Q +
Sbjct: 232 EVPLERRIKKPQRRQANISTQVYQEELEPEIFELEISSDSDMDVDEPTHSHIQSDAITQT 291
Query: 328 EEPKTEEIKSSDKAENQNIEKENEKKTENLPVKTKGLNQPLGSKTPTEPN 377
+ P E +D + Q+IE + TEN T G + PL K P +P+
Sbjct: 292 DIPTKESSTQTDIQQTQDIETQ----TEN----TNGSSLPL-KKRPYKPD 332
>M.Javanica_Scaff2850g025607 on XP_001609666 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1269
Score = 27.3 bits (59), Expect = 1.8, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 191 LKALPKTATQSTTLEPSTIELKTVSPTTESSTSPITEEIINSTETAEIKVTE 242
L ALP + LE S +LK V+P E +T ++ + + +A I V E
Sbjct: 420 LSALPYSPAYPKILEHSKDKLKKVAPKNEKNTETLS--FLQTGRSAPITVDE 469
>M.Javanica_Scaff2850g025607 on XP_001351561 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3553
Score = 25.4 bits (54), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 82 ERKERVKRFQEEYKRWMKLPLADRRVEMKKWFAERRKE 119
++ + KR YK W+K + + KK+F ++RKE
Sbjct: 1984 DKCDECKRACTTYKTWLKNWKTQYKTQSKKYFDDKRKE 2021
>M.Javanica_Scaff2850g025607 on XP_001348946 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3553
Score = 25.4 bits (54), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 82 ERKERVKRFQEEYKRWMKLPLADRRVEMKKWFAERRKE 119
++ + KR YK W+K + + KK+F ++RKE
Sbjct: 1984 DKCDECKRACTTYKTWLKNWKTQYKTQSKKYFDDKRKE 2021
>M.Javanica_Scaff2850g025607 on XP_001349533 PfEMP3 (Establishment) [Plasmodium falciparum]
Length = 2441
Score = 25.4 bits (54), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 8/23 (34%), Positives = 17/23 (73%)
Query: 78 KLREERKERVKRFQEEYKRWMKL 100
KL+E + + + +F++ YK++ KL
Sbjct: 499 KLKERKMQELHKFKKNYKKYQKL 521
>M.Javanica_Scaff2850g025607 on XP_001611736 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1365
Score = 25.0 bits (53), Expect = 8.6, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 177 KILAQVEAIRNKNKLKALPKTATQSTTLEPSTIELKTVSPTTESSTSPIT---EEIINST 233
K + ++ +I N K A + +T+ STI K + PTT SP+ E+ +
Sbjct: 855 KAIKELISICNSPKCSACDQHSTKCGQKAESTICEKCLQPTTTGVPSPLQAFLEDRLPGF 914
Query: 234 ETAEIKVTEN 243
E+ TEN
Sbjct: 915 SCQEVPETEN 924
>M.Javanica_Scaff2850g025607 on XP_001610568 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1329
Score = 25.0 bits (53), Expect = 8.9, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 33/86 (38%), Gaps = 4/86 (4%)
Query: 184 AIRNKNKLKALPKTATQSTTLEPSTIELKTVSPTTESSTSPITEEIINSTETAEIKVTEN 243
+I N K A K +T+ STI K + PTT SP+ + + V N
Sbjct: 847 SICNSPKCSACDKHSTKCGQKAESTICEKCLQPTTTGVPSPLQAFLEDRLPGFSCDVVRN 906
Query: 244 ATEASEEQQPTSTVSSSINVSEGTEQ 269
+QP +S + G+ Q
Sbjct: 907 ----DNSEQPYPPAASHLGHCNGSGQ 928
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff25042g090275
(72 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349437 PfEMP1 (Establishment) [Plasmodium falciparum] 23 1.4
>M.Javanica_Scaff25042g090275 on XP_001349437 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2231
Score = 23.5 bits (49), Expect = 1.4, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 5/44 (11%)
Query: 25 SCSS--RQTRYAFSREKGQCISFEYSGCGGNLNNFLNMQ--ECQ 64
SC++ R+ R R+K + + +Y+ GG NN++N Q +CQ
Sbjct: 1282 SCATPCRKYRKWIERKKYE-FTEQYNAYGGQKNNYVNEQKDKCQ 1324
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff29136g095982
(132 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAX07978 alpha-6 giardin (Others) [Giardia duodenalis] 26 0.60
Q4VPP5 Giardin subunit alpha-6 (Others) [Giardia duodenalis] 26 0.60
XP_828097 VSG (Establishment) [Trypanosoma brucei] 25 2.3
>M.Javanica_Scaff29136g095982 on AAX07978 alpha-6 giardin (Others) [Giardia duodenalis]
Length = 255
Score = 26.2 bits (56), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 43 SINFKEVLNIGVPKDLEYKEIWTPYGHHW 71
+ ++K VLN + D+ KE WT HW
Sbjct: 116 TTDYKRVLNDDLLSDIGTKEQWTKVFKHW 144
>M.Javanica_Scaff29136g095982 on Q4VPP5 Giardin subunit alpha-6 (Others) [Giardia duodenalis]
Length = 255
Score = 26.2 bits (56), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 43 SINFKEVLNIGVPKDLEYKEIWTPYGHHW 71
+ ++K VLN + D+ KE WT HW
Sbjct: 116 TTDYKRVLNDDLLSDIGTKEQWTKVFKHW 144
>M.Javanica_Scaff29136g095982 on XP_828097 VSG (Establishment) [Trypanosoma brucei]
Length = 520
Score = 24.6 bits (52), Expect = 2.3, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 22/59 (37%), Gaps = 13/59 (22%)
Query: 14 NVTSKDSNLSEFKIWQCERAITLFRRKPPSINFKEVLNIGVPKDLEYKEIWTPYGHHWW 72
NVT+ S WQ +L R NF E L KD Y +IW WW
Sbjct: 74 NVTTSSSE------WQKIFDTSLSREA--GTNFPETL-----KDKPYADIWKANWASWW 119
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4476g034792
(126 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_843643 VSG (Establishment) [Trypanosoma brucei] 28 0.11
XP_001609450 variant erythrocyte surface antigen-1, alpha subun... 23 5.3
>M.Javanica_Scaff4476g034792 on XP_843643 VSG (Establishment) [Trypanosoma brucei]
Length = 516
Score = 28.5 bits (62), Expect = 0.11, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 21/46 (45%)
Query: 9 SRCSLFEEGRITELNPGCFDELNSQNKTLVYCRLKCEESDEATVLR 54
S+C LF E N G F S + Y LK E D++T L+
Sbjct: 207 SKCGLFRHEANPESNGGIFITAASSKPSFGYGMLKIEAEDQSTGLK 252
>M.Javanica_Scaff4476g034792 on XP_001609450 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1309
Score = 23.5 bits (49), Expect = 5.3, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 30 LNSQNKTLVYCRL-KCEESDEATVLRKEPSNNHICAS 65
LN+ N L C KC D+ + +PSN +C +
Sbjct: 811 LNAINNLLSICNSPKCHSCDQHSTKCGQPSNPTVCPA 847
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3063g026913
(93 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_843847 VSG (Establishment) [Trypanosoma brucei] 28 0.089
XP_001351080 PfEMP1 (Establishment) [Plasmodium falciparum] 25 1.2
XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum] 24 2.4
XP_001349033 PfEMP1 (Establishment) [Plasmodium falciparum] 23 2.7
XP_965997 PfEMP1 (Establishment) [Plasmodium falciparum] 23 3.1
XP_807433 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.9
XP_815234 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 6.5
XP_812850 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 6.5
>M.Javanica_Scaff3063g026913 on XP_843847 VSG (Establishment) [Trypanosoma brucei]
Length = 407
Score = 27.7 bits (60), Expect = 0.089, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 11/47 (23%)
Query: 18 SECGYGYGGGGGFGGGGL-----------GGGGFQNSQQSEWRAWFD 53
++CGY GGGFGG L G G Q + E AW+D
Sbjct: 128 ADCGYTSIFGGGFGGKALALDLLCLCRPSGNGDHQKNLCYEANAWYD 174
>M.Javanica_Scaff3063g026913 on XP_001351080 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2209
Score = 24.6 bits (52), Expect = 1.2, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
Query: 33 GGLGGGGFQ--NSQQSEWRAWFDK 54
GGL G G + N Q+ W+ ++DK
Sbjct: 529 GGLCGNGAKKNNIQEKTWKCYYDK 552
>M.Javanica_Scaff3063g026913 on XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2994
Score = 23.9 bits (50), Expect = 2.4, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 46 SEWRAWFDKLQQAELKTIL 64
+EW WF K+Q E + ++
Sbjct: 2221 TEWAEWFCKMQSQEYEVLV 2239
>M.Javanica_Scaff3063g026913 on XP_001349033 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2064
Score = 23.5 bits (49), Expect = 2.7, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 46 SEWRAWFDKLQQAELKTIL 64
+EW WF K+Q E ++
Sbjct: 1025 TEWAEWFCKMQSQEYNKLM 1043
>M.Javanica_Scaff3063g026913 on XP_965997 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2879
Score = 23.5 bits (49), Expect = 3.1, Method: Composition-based stats.
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 46 SEWRAWFDKLQQAELKTI 63
+EW W+ K+Q E K +
Sbjct: 1006 TEWAEWYCKMQSQEYKKL 1023
>M.Javanica_Scaff3063g026913 on XP_807433 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1042
Score = 23.1 bits (48), Expect = 3.9, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 25/61 (40%)
Query: 8 LLFLIIAIHLSECGYGYGGGGGFGGGGLGGGGFQNSQQSEWRAWFDKLQQAELKTILGTL 67
+LF+++ SE YG G G GG F + + FD + L + G +
Sbjct: 48 VLFIVMMCCSSEATYGKEGNSRNGIIFEGGNSFNDPETENLVQAFDSFRAPSLAYVNGVV 107
Query: 68 L 68
+
Sbjct: 108 V 108
>M.Javanica_Scaff3063g026913 on XP_815234 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1032
Score = 22.3 bits (46), Expect = 6.5, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 25/61 (40%)
Query: 8 LLFLIIAIHLSECGYGYGGGGGFGGGGLGGGGFQNSQQSEWRAWFDKLQQAELKTILGTL 67
LL +++ SE YG G G GG F +++ FD + L + G +
Sbjct: 49 LLLVVLTSCSSEATYGKEGNSRNGTIFEGGNSFSDAENKLLVQAFDSFRAPSLAYVNGVV 108
Query: 68 L 68
+
Sbjct: 109 V 109
>M.Javanica_Scaff3063g026913 on XP_812850 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1032
Score = 22.3 bits (46), Expect = 6.5, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 25/61 (40%)
Query: 8 LLFLIIAIHLSECGYGYGGGGGFGGGGLGGGGFQNSQQSEWRAWFDKLQQAELKTILGTL 67
LL +++ SE YG G G GG F +++ FD + L + G +
Sbjct: 49 LLLVVLTSCSSEATYGKEGNSRNGTIFEGGNSFSDAENKLLVQAFDSFRAPSLAYVNGVV 108
Query: 68 L 68
+
Sbjct: 109 V 109
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3780g031140
(204 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_652967 Vps35 (Establishment) [Entamoeba histolytica] 25 4.4
AAW78166 TRAP (Invasion) [Plasmodium falciparum] 25 4.6
AAW78159 TRAP (Invasion) [Plasmodium falciparum] 25 5.2
AAW78177 TRAP (Invasion) [Plasmodium falciparum] 25 5.2
AAW78176 TRAP (Invasion) [Plasmodium falciparum] 25 5.4
AAW78164 TRAP (Invasion) [Plasmodium falciparum] 24 5.7
AAW78138 TRAP (Invasion) [Plasmodium falciparum] 24 6.3
AAW78152 TRAP (Invasion) [Plasmodium falciparum] 24 6.3
AAW78163 TRAP (Invasion) [Plasmodium falciparum] 24 6.5
>M.Javanica_Scaff3780g031140 on XP_652967 Vps35 (Establishment) [Entamoeba histolytica]
Length = 757
Score = 24.6 bits (52), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 9/64 (14%)
Query: 35 KTRATLHNLCNNTLEDD--NEYA-----RYCDVTVSSAIFGVTSNCNLYFNQTRIKTLPI 87
K AT++ + +N L + ++YA R ++++S FGV N+Y + I LP
Sbjct: 370 KQTATIYEMVSNYLPETGLDQYAITHLMRLLQLSLTS--FGVKEMLNIYGFRNSISLLPY 427
Query: 88 DKER 91
K +
Sbjct: 428 SKRK 431
>M.Javanica_Scaff3780g031140 on AAW78166 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 24.6 bits (52), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 41/95 (43%), Gaps = 18/95 (18%)
Query: 46 NTLEDD-NEYARYCDVTVSSAIFGVTSNCNLYFNQTRIKTLPIDKERCEGFFNSTDHSDY 104
N+++D E + D+ V A+FG+ N+ FN+ + P D +
Sbjct: 166 NSIQDSLKESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGK-------------- 211
Query: 105 CKIFLDGAY--LRCMCHP-IKECCMYTEDTLLAAV 136
C ++ D A+ ++ + P +K C+ E T V
Sbjct: 212 CNLYADSAWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff3780g031140 on AAW78159 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 24.6 bits (52), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 41/95 (43%), Gaps = 18/95 (18%)
Query: 46 NTLEDD-NEYARYCDVTVSSAIFGVTSNCNLYFNQTRIKTLPIDKERCEGFFNSTDHSDY 104
N+++D E + D+ V A+FG+ N+ FN+ + P D +
Sbjct: 166 NSIQDSLKESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGK-------------- 211
Query: 105 CKIFLDGAY--LRCMCHP-IKECCMYTEDTLLAAV 136
C ++ D A+ ++ + P +K C+ E T V
Sbjct: 212 CNLYADSAWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff3780g031140 on AAW78177 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 24.6 bits (52), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 41/95 (43%), Gaps = 18/95 (18%)
Query: 46 NTLEDD-NEYARYCDVTVSSAIFGVTSNCNLYFNQTRIKTLPIDKERCEGFFNSTDHSDY 104
N+++D E + D+ V A+FG+ N+ FN+ + P D +
Sbjct: 166 NSIQDSLKESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGK-------------- 211
Query: 105 CKIFLDGAY--LRCMCHP-IKECCMYTEDTLLAAV 136
C ++ D A+ ++ + P +K C+ E T V
Sbjct: 212 CNLYADSAWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff3780g031140 on AAW78176 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 24.6 bits (52), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 18/90 (20%)
Query: 46 NTLEDD-NEYARYCDVTVSSAIFGVTSNCNLYFNQTRIKTLPIDKERCEGFFNSTDHSDY 104
N+++D E + D+ V A+FG+ N+ FN+ + P D +
Sbjct: 166 NSIQDSLKESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGK-------------- 211
Query: 105 CKIFLDGAY--LRCMCHP-IKECCMYTEDT 131
C ++ D A+ ++ + P +K C+ E T
Sbjct: 212 CNLYADSAWENVKNVIGPFMKAVCVEVEKT 241
>M.Javanica_Scaff3780g031140 on AAW78164 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 24.3 bits (51), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 41/95 (43%), Gaps = 18/95 (18%)
Query: 46 NTLEDD-NEYARYCDVTVSSAIFGVTSNCNLYFNQTRIKTLPIDKERCEGFFNSTDHSDY 104
N+++D E + D+ V A+FG+ N+ FN+ + P D +
Sbjct: 166 NSIQDSLKESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGK-------------- 211
Query: 105 CKIFLDGAY--LRCMCHP-IKECCMYTEDTLLAAV 136
C ++ D A+ ++ + P +K C+ E T V
Sbjct: 212 CNLYADSAWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff3780g031140 on AAW78138 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 24.3 bits (51), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 18/95 (18%)
Query: 46 NTLEDD-NEYARYCDVTVSSAIFGVTSNCNLYFNQTRIKTLPIDKERCEGFFNSTDHSDY 104
N+++D E + D V A+FG+ N+ FN+ + P D +
Sbjct: 166 NSIQDSLKESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGK-------------- 211
Query: 105 CKIFLDGAY--LRCMCHP-IKECCMYTEDTLLAAV 136
C ++ D A+ ++ + P +K C+ E T V
Sbjct: 212 CNLYADSAWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff3780g031140 on AAW78152 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 24.3 bits (51), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 18/95 (18%)
Query: 46 NTLEDD-NEYARYCDVTVSSAIFGVTSNCNLYFNQTRIKTLPIDKERCEGFFNSTDHSDY 104
N+++D E + D V A+FG+ N+ FN+ + P D +
Sbjct: 166 NSIQDSLKESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGK-------------- 211
Query: 105 CKIFLDGAY--LRCMCHP-IKECCMYTEDTLLAAV 136
C ++ D A+ ++ + P +K C+ E T V
Sbjct: 212 CNLYADSAWENVKNVIGPFMKAVCVEVEKTASCGV 246
>M.Javanica_Scaff3780g031140 on AAW78163 TRAP (Invasion) [Plasmodium falciparum]
Length = 565
Score = 24.3 bits (51), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 18/95 (18%)
Query: 46 NTLEDD-NEYARYCDVTVSSAIFGVTSNCNLYFNQTRIKTLPIDKERCEGFFNSTDHSDY 104
N+++D E + D V A+FG+ N+ FN+ + P D +
Sbjct: 166 NSIQDSLKESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGK-------------- 211
Query: 105 CKIFLDGAY--LRCMCHP-IKECCMYTEDTLLAAV 136
C ++ D A+ ++ + P +K C+ E T V
Sbjct: 212 CNLYADSAWENVKNVIGPFMKAVCVEVEKTASCGV 246
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5778g040999
(65 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_816729 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.27
Q9XZD5 TgPrx2 (Others) [Toxoplasma gondii] 22 3.6
>M.Javanica_Scaff5778g040999 on XP_816729 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 890
Score = 25.4 bits (54), Expect = 0.27, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 2 QRILLFVSLFLCIVLVFENIKFASASPLESREYSHHAHPPAYNW 45
QR +F LF +VL+F + AS E S+ P + W
Sbjct: 35 QRPHMFRHLFYSVVLLFCVVVMCCASEDAHAEESNPVTAPTFAW 78
>M.Javanica_Scaff5778g040999 on Q9XZD5 TgPrx2 (Others) [Toxoplasma gondii]
Length = 255
Score = 21.9 bits (45), Expect = 3.6, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 13/34 (38%)
Query: 14 IVLVFENIKFASASPLESREYSHHAHPPAYNWDL 47
I V + IKF + R H H P WD
Sbjct: 141 IFFVRDAIKFPDFIHTQKRHPQTHLHDPNMVWDF 174
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3027g026710
(73 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609667 variant erythrocyte surface antigen-1, alpha subun... 24 1.2
XP_001609041 variant erythrocyte surface antigen-1, alpha subun... 23 1.3
XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum] 23 2.5
XP_966160 PfEMP1 (Establishment) [Plasmodium falciparum] 22 3.8
>M.Javanica_Scaff3027g026710 on XP_001609667 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1303
Score = 23.9 bits (50), Expect = 1.2, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Query: 28 QVCPLICKACTANGCLSTDKLCEPAV 53
Q CPL+ G STDK EPA+
Sbjct: 533 QYCPLVLIGIQG-GIHSTDKTLEPAI 557
>M.Javanica_Scaff3027g026710 on XP_001609041 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1318
Score = 23.5 bits (49), Expect = 1.3, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Query: 28 QVCPLICKACTANGCLSTDKLCEPAV 53
Q CPL+ G STDK EPA+
Sbjct: 545 QYCPLVLIGIQG-GLKSTDKTLEPAI 569
>M.Javanica_Scaff3027g026710 on XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3346
Score = 23.1 bits (48), Expect = 2.5, Method: Composition-based stats.
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 34 CKACTANGCLSTDKLCEPAVDFCK 57
C+ C + C+ D CE CK
Sbjct: 2585 CEDCRSWKCMKGDSKCENCTKACK 2608
>M.Javanica_Scaff3027g026710 on XP_966160 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2394
Score = 22.3 bits (46), Expect = 3.8, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 12/30 (40%), Gaps = 3/30 (10%)
Query: 34 CKACTANG---CLSTDKLCEPAVDFCKFFG 60
C +C G C D C P CK +G
Sbjct: 1042 CASCKKKGKEKCTQGDNDCTPCDKKCKEYG 1071
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff30300g097350
(115 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_804800 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.1
XP_812514 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.1
>M.Javanica_Scaff30300g097350 on XP_804800 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 940
Score = 23.5 bits (49), Expect = 4.1, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 30/84 (35%), Gaps = 6/84 (7%)
Query: 24 PNSYPPEIAILSTANEGLNMIELGTLQNHAVTLNISYMQVHPSLDNDVLPLGATRRF--- 80
P+ PP L NEG+ T VT ++ Q L ++ P G T+
Sbjct: 756 PDGQPPPDLKLLNGNEGVGGGSTSTSAPSTVTTSLGKEQSTIQLSSETSP-GGTKTVDGG 814
Query: 81 --KRSGQLLEMTVARLFPGNRVSQ 102
Q +E PG+R Q
Sbjct: 815 SSSNGDQTVEAEAGDTVPGDRPPQ 838
>M.Javanica_Scaff30300g097350 on XP_812514 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 925
Score = 23.1 bits (48), Expect = 5.1, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 61 MQVHPSLDNDVLPLGATRRFKRSGQLLEMTVARLFPGNRVS 101
+Q+ S++ DV+ R + GQLLE + + P S
Sbjct: 727 VQMDGSIEGDVIQPSGVGRPEEQGQLLESSGVNVVPAPTAS 767
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4895g036850
(387 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001611898 variant erythrocyte surface antigen-1, beta subuni... 28 1.2
>M.Javanica_Scaff4895g036850 on XP_001611898 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1214
Score = 28.1 bits (61), Expect = 1.2, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 30/84 (35%), Gaps = 4/84 (4%)
Query: 307 GTHWFKFLKEYYLCQCCGDYNRRTGRCRQINLLSKAKKPSMNDRKCYTCGVTQTTCWRRH 366
G +W + L +C + T R R I + D CG+ ++H
Sbjct: 637 GVYWGSGYSQSNLWRCKTEVTVSTARNRAIWINGVVGAGGAGDEHTKQCGLQSGAGGKKH 696
Query: 367 AKLGFHLCNA----CGFKQRGYKN 386
+ L LC+ C FK G N
Sbjct: 697 SPLMCFLCDGLHGMCCFKTVGRGN 720
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4132g033043
(62 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 1.9
AAL38222 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 1.9
AAL38218 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 1.9
AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 2.0
XP_001351513 PfEMP1 (Establishment) [Plasmodium falciparum] 22 2.9
AAL38220 PfNBP1 (Adhesin) [Plasmodium falciparum] 22 4.7
>M.Javanica_Scaff4132g033043 on AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2965
Score = 22.7 bits (47), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 5 LINLFILIKLINSQDLFTSSAELQQLVHVEKEIPKIIENYILLENKRLENLKGV 58
++N+ I K N Q + ++ L++ ++EI K I N I+ NK EN+ +
Sbjct: 2150 ILNIIIKKKQQNEQRIVINAEYDSSLINKDEEIKKEINNQIIELNKHNENISNI 2203
>M.Javanica_Scaff4132g033043 on AAL38222 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2976
Score = 22.7 bits (47), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 5 LINLFILIKLINSQDLFTSSAELQQLVHVEKEIPKIIENYILLENKRLENLKGV 58
++N+ I K N Q + ++ L++ ++EI K I N I+ NK EN+ +
Sbjct: 2157 ILNIIIKKKQQNEQRIVINAEYDSSLINKDEEIKKEINNQIIELNKHNENISNI 2210
>M.Javanica_Scaff4132g033043 on AAL38218 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2977
Score = 22.7 bits (47), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 5 LINLFILIKLINSQDLFTSSAELQQLVHVEKEIPKIIENYILLENKRLENLKGV 58
++N+ I K N Q + ++ L++ ++EI K I N I+ NK EN+ +
Sbjct: 2154 ILNIIIKKKQQNEQRIVINAEYDSSLINKDEEIKKEINNQIIELNKHNENISNI 2207
>M.Javanica_Scaff4132g033043 on AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2969
Score = 22.7 bits (47), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 5 LINLFILIKLINSQDLFTSSAELQQLVHVEKEIPKIIENYILLENKRLENLKGV 58
++N+ I K N Q + ++ L++ ++EI K I N I+ NK EN+ +
Sbjct: 2146 ILNIIIKKKQQNEQRIVINAEYDSSLINKDEEIKKEINNQIIELNKHNENISNI 2199
>M.Javanica_Scaff4132g033043 on XP_001351513 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2152
Score = 22.3 bits (46), Expect = 2.9, Method: Composition-based stats.
Identities = 8/11 (72%), Positives = 10/11 (90%)
Query: 34 EKEIPKIIENY 44
EKEIPK+ +NY
Sbjct: 1258 EKEIPKLKDNY 1268
>M.Javanica_Scaff4132g033043 on AAL38220 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2957
Score = 21.6 bits (44), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 28/51 (54%)
Query: 5 LINLFILIKLINSQDLFTSSAELQQLVHVEKEIPKIIENYILLENKRLENL 55
++N+ I K N Q + ++ L++ ++EI K I N I+ NK EN+
Sbjct: 2144 ILNIIIKKKQQNEQRIVINAEYDSSLINKDEEIKKEINNQIIELNKHNENI 2194
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4191g033320
(176 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_810562 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.1
AAL38220 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 9.6
AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 9.8
AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 9.8
AAL38218 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 9.8
>M.Javanica_Scaff4191g033320 on XP_810562 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 874
Score = 25.0 bits (53), Expect = 3.1, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 63 KGKNIYKLVYKKSIEKIAQATADNCKMAH-PGTV-GYGENLWANSWAM-DNLTEAVTGAP 119
KG +IY LV + S + + A C++ G+V G G N W + +N + + GA
Sbjct: 170 KGNDIYMLVGQHSSKDCQNSGAGGCELLLVKGSVSGEGTNNKKIDWKVTENPPQGLCGAQ 229
Query: 120 LSWWS 124
L W+
Sbjct: 230 LDSWT 234
>M.Javanica_Scaff4191g033320 on AAL38220 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2957
Score = 23.5 bits (49), Expect = 9.6, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 61 LPKGKNIYKLVYKKSIEKIAQATADNCKMAHPGTV 95
+PK K+ +K YK +EKI D+ K+ G +
Sbjct: 178 IPKDKDYHKF-YKNELEKILFNLKDSLKLLREGYI 211
>M.Javanica_Scaff4191g033320 on AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2965
Score = 23.5 bits (49), Expect = 9.8, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 61 LPKGKNIYKLVYKKSIEKIAQATADNCKMAHPGTV 95
+PK K+ +K YK +EKI D+ K+ G +
Sbjct: 178 IPKDKDYHKF-YKNKLEKILFNLKDSLKLLREGYI 211
>M.Javanica_Scaff4191g033320 on AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2969
Score = 23.5 bits (49), Expect = 9.8, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 61 LPKGKNIYKLVYKKSIEKIAQATADNCKMAHPGTV 95
+PK K+ +K YK +EKI D+ K+ G +
Sbjct: 178 IPKDKDYHKF-YKNKLEKILFNLKDSLKLLREGYI 211
>M.Javanica_Scaff4191g033320 on AAL38218 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2977
Score = 23.5 bits (49), Expect = 9.8, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 61 LPKGKNIYKLVYKKSIEKIAQATADNCKMAHPGTV 95
+PK K+ +K YK +EKI D+ K+ G +
Sbjct: 178 IPKDKDYHKF-YKNKLEKILFNLKDSLKLLREGYI 211
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff549g007499
(56 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6236g043048
(104 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_829792 VSG (Establishment) [Trypanosoma brucei] 23 3.2
>M.Javanica_Scaff6236g043048 on XP_829792 VSG (Establishment) [Trypanosoma brucei]
Length = 514
Score = 23.5 bits (49), Expect = 3.2, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 2 LLSLHERPFPLKFFDHQLKMAF 23
L++L ERP P K D Q ++++
Sbjct: 40 LVNLAERPAPAKITDAQAQVSY 61
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff599g008017
(278 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_817310 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.0
XP_818689 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.1
XP_001610567 variant erythrocyte surface antigen-1, alpha subun... 27 1.8
XP_001348153 MAEBL (Adhesin) [Plasmodium falciparum] 25 5.4
>M.Javanica_Scaff599g008017 on XP_817310 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 904
Score = 27.3 bits (59), Expect = 1.0, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Query: 102 SSLETLNVQPSIHFEQQNGQQNNYLIE--EQSEGYCPNNERSKIRCSAAGQCSPS 154
S TL +PS ++ N + L+E EG CP K C A Q S S
Sbjct: 127 SKFLTLTDEPSKELDKSN-LKTQVLVECSANKEGKCPAGNEEKCACRVADQVSGS 180
>M.Javanica_Scaff599g008017 on XP_818689 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 844
Score = 27.3 bits (59), Expect = 1.1, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 12/22 (54%)
Query: 132 EGYCPNNERSKIRCSAAGQCSP 153
EG CP + K CS AGQ P
Sbjct: 159 EGKCPAGKEEKRACSTAGQDDP 180
>M.Javanica_Scaff599g008017 on XP_001610567 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1315
Score = 26.6 bits (57), Expect = 1.8, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Query: 200 CCQCK-VGRSAGYCNMGACQPGYQCQ 224
C +CK G + C+ G C PG +CQ
Sbjct: 180 CQRCKGSGDAQCSCSTGGCSPGEECQ 205
>M.Javanica_Scaff599g008017 on XP_001348153 MAEBL (Adhesin) [Plasmodium falciparum]
Length = 2054
Score = 25.0 bits (53), Expect = 5.4, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 124 NYLIEEQSEGYCPNNERSKIRCSAAGQC 151
+Y+ + S G C N ER + CS + C
Sbjct: 1925 DYMKDNISSGTCSNEERKSLCCSISDFC 1952
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3898g031792
(347 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_818470 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.4
>M.Javanica_Scaff3898g031792 on XP_818470 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 868
Score = 26.6 bits (57), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 118 PKPDDLNIIEIPIDDQIENRSINYFVKTYTEIFKHKNRNTN 158
P PDD +P D + S N+F KT+ + + N N
Sbjct: 508 PSPDDACSAAMPTDGLVGFLSGNFFDKTWRDEYLGVNATVN 548
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff432g006207
(149 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351517 PfEMP1 (Establishment) [Plasmodium falciparum] 27 0.76
XP_828093 VSG (Establishment) [Trypanosoma brucei] 26 1.3
XP_966151 TLP (Invasion) [Plasmodium falciparum] 24 4.2
>M.Javanica_Scaff432g006207 on XP_001351517 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2193
Score = 26.6 bits (57), Expect = 0.76, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 30 NLIQKEENNAVKTEGGEIQYGITNSIPTIFLQSRSPFETFC 70
N++ KE+ + KT GG+ S PT F ETFC
Sbjct: 1206 NVVLKEDESGAKTTGGDTPLTNFISRPTYFRYLEEWGETFC 1246
>M.Javanica_Scaff432g006207 on XP_828093 VSG (Establishment) [Trypanosoma brucei]
Length = 512
Score = 25.8 bits (55), Expect = 1.3, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 26/59 (44%)
Query: 13 QINQEMSFETFRQEQQINLIQKEENNAVKTEGGEIQYGITNSIPTIFLQSRSPFETFCT 71
Q+NQ +S+ + N +QK+ + A K + + N I S PF T+ T
Sbjct: 367 QLNQILSYYVYHASLNYNALQKKLDEATKKKDTKAAEDTCNKIKDETACSNKPFCTYNT 425
>M.Javanica_Scaff432g006207 on XP_966151 TLP (Invasion) [Plasmodium falciparum]
Length = 1371
Score = 24.3 bits (51), Expect = 4.2, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 7 HNNTPMQINQEMSFETFRQEQQINLIQKEENNAVKTEGGEIQ 48
HNN N E ++++ I+++ KEE+N E+Q
Sbjct: 1036 HNNNYYMTN-EHDERKIKKQENIDILSKEEDNISSNYNNELQ 1076
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff27920g094381
(69 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_818270 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.4
XP_829778 VSG (Establishment) [Trypanosoma brucei] 22 7.0
>M.Javanica_Scaff27920g094381 on XP_818270 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 380
Score = 21.6 bits (44), Expect = 5.4, Method: Composition-based stats.
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 51 KEYYNCIVKECKY 63
K +Y C ECKY
Sbjct: 129 KLFYRCFSTECKY 141
>M.Javanica_Scaff27920g094381 on XP_829778 VSG (Establishment) [Trypanosoma brucei]
Length = 493
Score = 21.6 bits (44), Expect = 7.0, Method: Composition-based stats.
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 31 KRDPKNPTECEKGCKTK 47
K D K+ TE ++ C+TK
Sbjct: 403 KEDGKSSTETDETCETK 419
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff27621g093975
(229 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_815511 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.28
XP_815662 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.69
XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum] 27 0.89
XP_809010 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.8
XP_807444 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.8
XP_815498 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.0
XP_809607 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.0
XP_818477 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.1
XP_804542 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.3
XP_806774 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.6
XP_805548 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.9
XP_811362 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.3
ABB59609 CSP (Invasion) [Plasmodium falciparum] 23 4.4
XP_812988 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.0
XP_804421 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.5
XP_819146 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.5
XP_818480 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.6
XP_804820 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.8
>M.Javanica_Scaff27621g093975 on XP_815511 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 848
Score = 28.9 bits (63), Expect = 0.28, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 17/110 (15%)
Query: 63 NQHDGLTKNI-EGFLRS----IDLNINKNMFEVEIRDKSKYIPTDQLKKKILIEITNNEI 117
N+H G K + GF+ + +D N + + + + K + + K ++ + +T+N
Sbjct: 368 NKHKGPAKGVTSGFITATIDGVDNNRDVMLVTLPVYSKKEKNGNNNRKGELHLWLTDNTH 427
Query: 118 IQNSLPGFEKMVLRNVNFIENNNCYETSILYKSGNNFSSVEENIEDYKNK 167
I + P E E+ + +S+LYKSGNN EE I Y+ K
Sbjct: 428 IVDIGPVSE----------EDEDAAASSLLYKSGNN--KKEELIALYEKK 465
>M.Javanica_Scaff27621g093975 on XP_815662 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 963
Score = 27.7 bits (60), Expect = 0.69, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 15/88 (17%)
Query: 84 NKNMFEVEI----RDKSKYIPTDQLKKKILIEITNNEIIQNSLPGFEKMVLRNVNFIENN 139
N+N+ V + R+ SK + TD K K+ + +T+N I + P + N +++
Sbjct: 388 NRNVMLVTLPVYPREDSKKV-TDNRKGKLHLWLTDNTHIVDIGP------VSN----DDD 436
Query: 140 NCYETSILYKSGNNFSSVEENIEDYKNK 167
+ +S+LYKSG + EE I Y+ K
Sbjct: 437 DAAASSLLYKSGKSEDKKEELIALYEKK 464
>M.Javanica_Scaff27621g093975 on XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3954
Score = 27.3 bits (59), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 93 RDKSKYIPTDQLKKKILIEITNNEIIQNSLPGFEKMVLRNVNFIENNNCYETSILYKSGN 152
R+ + D+ K+K E N+I Q L EK+ E Y S++ SGN
Sbjct: 1467 RNNGPHKEGDKEKRKKFWETNKNDIWQGMLCALEKIANNKKTLTET---YNYSLVKFSGN 1523
Query: 153 NFSSVEE 159
N +++E+
Sbjct: 1524 NSTTLED 1530
>M.Javanica_Scaff27621g093975 on XP_809010 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 774
Score = 25.8 bits (55), Expect = 2.8, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 21/32 (65%)
Query: 136 IENNNCYETSILYKSGNNFSSVEENIEDYKNK 167
+ +++ +S+LYKSG N ++ +E I Y+ K
Sbjct: 435 VSDDDAAASSLLYKSGTNNNNKDELIALYEKK 466
>M.Javanica_Scaff27621g093975 on XP_807444 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 777
Score = 25.8 bits (55), Expect = 2.8, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 21/32 (65%)
Query: 136 IENNNCYETSILYKSGNNFSSVEENIEDYKNK 167
+ +++ +S+LYKSG N ++ +E I Y+ K
Sbjct: 437 VSDDDAAASSLLYKSGTNNNNKDELIALYEKK 468
>M.Javanica_Scaff27621g093975 on XP_815498 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 822
Score = 25.4 bits (54), Expect = 3.0, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 137 ENNNCYETSILYKSGNNFSSVEENIEDYKNK 167
E+ + +S+LYKSGNN EE I Y+ K
Sbjct: 418 EDEDAAASSLLYKSGNN--KKEELIALYEKK 446
>M.Javanica_Scaff27621g093975 on XP_809607 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 920
Score = 25.4 bits (54), Expect = 3.0, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 18/108 (16%)
Query: 63 NQHDGLTKNIE-GFLR-SID-LNINKNMFEVEIRDKSKYIPTDQLKKKILIEITNNEIIQ 119
N+H G K++ GF+ +ID + N+N+ V + Y K K+ + +T+N I
Sbjct: 346 NKHKGNVKSVRSGFITATIDGVEDNRNVMLVTL---PVYAEKGNEKGKLHLWLTDNTHIV 402
Query: 120 NSLPGFEKMVLRNVNFIENNNCYETSILYKSGNNFSSVEENIEDYKNK 167
+ P + ++ +S+LYKSG + EE I Y+ +
Sbjct: 403 DIGP------------VSDDEAATSSLLYKSGKSGDKKEELIALYEKR 438
>M.Javanica_Scaff27621g093975 on XP_818477 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 869
Score = 25.4 bits (54), Expect = 3.1, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Query: 138 NNNCYETSILYKSGNNFSSVEENIEDYKNK 167
N++ +S+LYKSGNN EE I Y+ K
Sbjct: 408 NDDVAASSLLYKSGNN---KEELIALYEKK 434
>M.Javanica_Scaff27621g093975 on XP_804542 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 813
Score = 25.4 bits (54), Expect = 3.3, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 138 NNNCYETSILYKSGNNFSSVEENIEDYKNK 167
N++ +S+LYKSG N ++ E I Y+ K
Sbjct: 436 NDDAAASSLLYKSGTNGNNNNELIALYEKK 465
>M.Javanica_Scaff27621g093975 on XP_806774 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 837
Score = 25.4 bits (54), Expect = 3.6, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 137 ENNNCYETSILYKSGNNFSSVEENIEDYKNK 167
E + +S+LYKSG N EE I Y+ K
Sbjct: 426 EEADVTASSLLYKSGGNGDKKEELIALYEKK 456
>M.Javanica_Scaff27621g093975 on XP_805548 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1044
Score = 25.4 bits (54), Expect = 3.9, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Query: 137 ENNNCYETSILYKSGNNFSSVEENIEDYKNK 167
EN++ +S+L KSG N + EE I Y+NK
Sbjct: 410 ENDDAAASSLLMKSGKN--NNEELISLYENK 438
>M.Javanica_Scaff27621g093975 on XP_811362 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 524
Score = 25.0 bits (53), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 23/41 (56%)
Query: 132 NVNFIENNNCYETSILYKSGNNFSSVEENIEDYKNKLLSSY 172
+ + +++ +S+LYKSG N ++ +E I Y+ K Y
Sbjct: 431 GIGPVSDDDAAASSLLYKSGTNNNNKDELIALYEKKKDDGY 471
>M.Javanica_Scaff27621g093975 on ABB59609 CSP (Invasion) [Plasmodium falciparum]
Length = 77
Score = 23.5 bits (49), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 10/55 (18%)
Query: 60 KTNNQHDGLTKNIEGFLRSIDLNIN----------KNMFEVEIRDKSKYIPTDQL 104
K NN + K+IE +LR+I +++ N +V I+ S P DQL
Sbjct: 1 KNNNNEEPSDKHIEQYLRNIQNSLSTEWSPCSVTCGNGIQVRIKPGSADKPKDQL 55
>M.Javanica_Scaff27621g093975 on XP_812988 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 889
Score = 24.6 bits (52), Expect = 6.0, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 136 IENNNCYETSILYKSGNNFSSVEENIEDYKNK 167
+ +++ +S+LYKSG + + EE I Y+ K
Sbjct: 410 VSDDDVAASSLLYKSGESETKKEELIALYEKK 441
>M.Javanica_Scaff27621g093975 on XP_804421 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 864
Score = 24.6 bits (52), Expect = 6.5, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 49/115 (42%), Gaps = 27/115 (23%)
Query: 63 NQHDGLTKNI-EGFLRS----IDLNINKNMFEVEIRDKSKYIPTDQLKKKILIEITNNEI 117
N+H G K + GF+ + +D N + + + + K + + K + + +T+N
Sbjct: 417 NKHKGTAKGVTSGFITATIDGVDNNRDVMLVTLPVYSKKEKNGNNNGKSVLHLWVTDNAH 476
Query: 118 IQNSLPGFEKMVLRNVNFIENNNCYETSILYKSGNNFSSVEENIEDYKNKLLSSY 172
I + P ++ + +S+LYKSGNN NKL++ Y
Sbjct: 477 IVDIGP-----------VSDDEDAAASSLLYKSGNN-----------NNKLIALY 509
>M.Javanica_Scaff27621g093975 on XP_819146 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 825
Score = 24.6 bits (52), Expect = 6.5, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 138 NNNCYETSILYKSGNNFSSVEENIEDYKNK 167
+++ +S+LYKSGNN + EE I Y+ K
Sbjct: 403 DDDVAASSLLYKSGNN-NDEEELITLYEKK 431
>M.Javanica_Scaff27621g093975 on XP_818480 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 926
Score = 24.6 bits (52), Expect = 6.6, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 137 ENNNCYETSILYKSGNNFSSVEENIEDYKNK 167
++++ +S+LYKSG + + EE I Y+ K
Sbjct: 411 DDDDAAASSLLYKSGKDNNEKEELIALYEKK 441
>M.Javanica_Scaff27621g093975 on XP_804820 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 954
Score = 24.6 bits (52), Expect = 6.8, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 23/112 (20%)
Query: 63 NQHDGLTKNI-EGFLRSIDLNINKNMFEVEIRDKSKYIPTDQLKK-KILIEITNNEIIQN 120
N+H G K + GF+ + ++ + V + Y D KK K+ + +T+N I +
Sbjct: 365 NKHKGPAKGVTSGFITATIDGVDSDKRNVMLVTLPVYSEKDGKKKGKLHLWLTDNTHIVD 424
Query: 121 SLPGFEKMVLRNVNFIENNNCYETSILYKSGNNFSSVEENIEDYKNKLLSSY 172
P K + +S+LYKSGNN NKL++ Y
Sbjct: 425 IGPVSGK----------EEDAAASSLLYKSGNN-----------NNKLIALY 455
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff451g006426
(128 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_804686 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.0
XP_001609602 SBP2 (Others) [Babesia bovis] 24 3.7
XP_001350796 PfEMP1 (Establishment) [Plasmodium falciparum] 23 5.5
>M.Javanica_Scaff451g006426 on XP_804686 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1045
Score = 24.3 bits (51), Expect = 3.0, Method: Composition-based stats.
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 61 FERVYVHESKFLIVPRCAGFSQIIYI 86
F Y HE K+L +P +G + +Y+
Sbjct: 599 FGLSYTHEKKWLAIPENSGDPEDVYV 624
>M.Javanica_Scaff451g006426 on XP_001609602 SBP2 (Others) [Babesia bovis]
Length = 2248
Score = 23.9 bits (50), Expect = 3.7, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 1 MPRYQRILIYFNEKLKISSCYFHIF 25
M +Y RIL+Y E ++ + + IF
Sbjct: 2120 MDKYNRILMYLPENIRKEAGQYAIF 2144
>M.Javanica_Scaff451g006426 on XP_001350796 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2646
Score = 23.5 bits (49), Expect = 5.5, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 12 NEKLKISSCYFHIFRRWTYNEIGNESPTCSLIECSV 47
NE ++ S ++ RR +N + E+P I+C V
Sbjct: 981 NENKQLRSDWWEANRRQVWNAMTCETPNGDNIKCDV 1016
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff30g000720
(166 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_627530 p23 (Adhesin) [Cryptosporidium parvum] 24 3.7
XP_001350935 PfEMP1 (Establishment) [Plasmodium falciparum] 25 4.3
XP_818708 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.7
XP_813726 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 6.2
XP_001351517 PfEMP1 (Establishment) [Plasmodium falciparum] 24 6.2
XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum] 24 7.2
>M.Javanica_Scaff30g000720 on XP_627530 p23 (Adhesin) [Cryptosporidium parvum]
Length = 211
Score = 24.3 bits (51), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 39 TIFDSSLNDLYLITSLNKRPKHLINILSLPNQQTNKLQLSPKHLKFLCNKFLKNNSKEYE 98
T+ S N L+ + K L + LP+ + K++L ++LKF N ++NN E+
Sbjct: 24 TVKPSFYNMLFPTVLWAQTKKALFVTVDLPDLKDYKVELEEQYLKFHAN--VENNEYEF- 80
Query: 99 RLLFLSKNIN 108
RL FL K IN
Sbjct: 81 RLDFL-KPIN 89
>M.Javanica_Scaff30g000720 on XP_001350935 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2268
Score = 24.6 bits (52), Expect = 4.3, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 13/77 (16%)
Query: 86 CNKFLKNNSKEYERLLFLSKNINLCRKEEKFMTKILGNEKRSSSSYDFVRFGRRNSF-QM 144
C+ LK+N +F S N C ++ K + +K + YD +++++ Q
Sbjct: 1309 CDDQLKDNPS-----IFPSLNCPSCGTPCRYYKKWINTKK---TEYD----KQKSAYEQQ 1356
Query: 145 DGKPNKKSNGNNGNTYD 161
GK K++NG GN +D
Sbjct: 1357 QGKCEKENNGAEGNDHD 1373
>M.Javanica_Scaff30g000720 on XP_818708 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 929
Score = 24.3 bits (51), Expect = 4.7, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Query: 120 ILGNEKRSSSSYDFVRFGRRNSFQMDGKPNKKSN-----GNNGNT 159
+L NEK+ S+ D Q++GK +KK + G+ GNT
Sbjct: 659 VLKNEKQGSAYVDGKSVCENVQCQLEGKEDKKISHFYIGGDGGNT 703
>M.Javanica_Scaff30g000720 on XP_813726 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 924
Score = 23.9 bits (50), Expect = 6.2, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Query: 120 ILGNEKRSSSSYDFVRFGRRNSFQMDGKPNKKSN-----GNNGNT 159
+L NEK+ S+ +D Q++GK +KK + G+ G+T
Sbjct: 654 VLKNEKQGSAYFDGKSVCENVQCQLEGKEDKKISHFYIGGDGGST 698
>M.Javanica_Scaff30g000720 on XP_001351517 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2193
Score = 23.9 bits (50), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 125 KRSSSSYDFVRFGRRNSFQMDGKPNKKSNGNNG 157
K+ ++ D RF + + D K K SNG+NG
Sbjct: 87 KKDTNGNDVERFSVKQQAEYDNKKMKCSNGSNG 119
>M.Javanica_Scaff30g000720 on XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2264
Score = 23.9 bits (50), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 125 KRSSSSYDFVRFGRRNSFQMDGKPNKKSNGNNG 157
K+ ++ D RF + + D K K SNG+NG
Sbjct: 85 KKDTNGNDVDRFSVKEQAEYDNKKMKCSNGSNG 117
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3095g027102
(124 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350415 PfEMP1 (Establishment) [Plasmodium falciparum] 26 0.66
XP_803420 VSG (Establishment) [Trypanosoma brucei] 25 1.5
XP_844689 VSG (Establishment) [Trypanosoma brucei] 24 2.6
XP_815156 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 7.9
XP_828105 VSG (Establishment) [Trypanosoma brucei] 23 8.6
>M.Javanica_Scaff3095g027102 on XP_001350415 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3056
Score = 26.2 bits (56), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 10/62 (16%)
Query: 44 LPSSHQEHSLQLDNPSSSNINFQNTNIKTHKDVKEFQNKICQYFKNLKFKENQKRLEKLL 103
+ S QE Q+ +PSS N TH +K + K+C++ K L +EN K L +
Sbjct: 431 IASVEQE---QISDPSS------NKTCITHSSIKANKKKVCKHVK-LGVRENDKDLRVCV 480
Query: 104 FD 105
+
Sbjct: 481 IE 482
Score = 23.1 bits (48), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
Query: 29 PYLTQKASTSIQQYQLPSSHQEHSLQLDNPSSSNIN 64
P++TQ IQ L SSH+E + +D NIN
Sbjct: 2820 PFITQ-----IQDRFLDSSHEEVTYNIDWNVPENIN 2850
>M.Javanica_Scaff3095g027102 on XP_803420 VSG (Establishment) [Trypanosoma brucei]
Length = 526
Score = 25.0 bits (53), Expect = 1.5, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 59 SSSNIN-FQNTNIKTHKDVKEFQNKICQYFK 88
SS+N QN + K+ KD NK+C+Y K
Sbjct: 273 SSTNCAVIQNESTKSEKDNDLLINKLCKYIK 303
>M.Javanica_Scaff3095g027102 on XP_844689 VSG (Establishment) [Trypanosoma brucei]
Length = 509
Score = 24.3 bits (51), Expect = 2.6, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 56 DNPSSSNINFQNTNIKTHKDVKEFQNKICQY 86
DN S++ N K+ KD NKIC Y
Sbjct: 269 DNASTNCALLHNAERKSEKDNDLLINKICNY 299
>M.Javanica_Scaff3095g027102 on XP_815156 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 966
Score = 23.1 bits (48), Expect = 7.9, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 9 NQQMNNNYSTDGNTLEGFVGPYLTQ 33
N+ +N + S+DGN G VG TQ
Sbjct: 833 NESVNADSSSDGNPAVGTVGGDTTQ 857
>M.Javanica_Scaff3095g027102 on XP_828105 VSG (Establishment) [Trypanosoma brucei]
Length = 508
Score = 22.7 bits (47), Expect = 8.6, Method: Composition-based stats.
Identities = 7/15 (46%), Positives = 12/15 (80%)
Query: 100 EKLLFDTKQNECHPI 114
+K +D K+N+C+PI
Sbjct: 431 DKRTYDEKENKCNPI 445
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff27124g093323
(137 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001348153 MAEBL (Adhesin) [Plasmodium falciparum] 24 3.5
XP_828102 VSG (Establishment) [Trypanosoma brucei] 23 9.2
>M.Javanica_Scaff27124g093323 on XP_001348153 MAEBL (Adhesin) [Plasmodium falciparum]
Length = 2054
Score = 24.3 bits (51), Expect = 3.5, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 4 NVVSANPPTNHSHQNSPITNGGTQGNDVSQHQQHHVYSHNVGGLGQQEHHSQYSVPHN 61
N+ + N N+++Q +N G V+Q N G QQ++ ++ +P+N
Sbjct: 548 NIYTDNKLYNNNNQKIKDSNNNMNGMSVTQRSPS--IGENQNGNPQQKYMERFDIPNN 603
>M.Javanica_Scaff27124g093323 on XP_828102 VSG (Establishment) [Trypanosoma brucei]
Length = 471
Score = 22.7 bits (47), Expect = 9.2, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 17/40 (42%)
Query: 2 NNNVVSANPPTNHSHQNSPITNGGTQGNDVSQHQQHHVYS 41
N V NP T S + T TQ +++H H V S
Sbjct: 236 NLKTVCVNPQTELSQWSDGQTGAATQWTTLAKHCTHKVTS 275
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5265g038607
(449 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5g000129
(385 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum] 32 0.049
XP_804273 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.16
XP_807358 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.41
XP_001351877 PfEMP1 (Establishment) [Plasmodium falciparum] 27 3.5
XP_821438 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 4.7
XP_804819 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.5
XP_811702 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 8.0
XP_818190 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 8.4
>M.Javanica_Scaff5g000129 on XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3346
Score = 32.3 bits (72), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 13/64 (20%)
Query: 222 LHNNNSVIIASTCRHNSDWKKFEDERCEEDNAQYDRWDYNQLMDNS--TFCLIPRGRRLG 279
LHNN+ I C+ R +E NA+Y +WD N + + C+ PR ++L
Sbjct: 1219 LHNNDGTIRIGQCK-----------RKDEGNAEYPKWDCNSQIHTTHNGACMPPRRQKLC 1267
Query: 280 SFRF 283
+ F
Sbjct: 1268 VYFF 1271
>M.Javanica_Scaff5g000129 on XP_804273 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 369
Score = 30.4 bits (67), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 182 NEEIGLNSTESQHHDKYLAS------FKGKRYVYGIGSETRDILHYLHNNNSVIIASTCR 235
+E +G+N+T + +K + S F+G + +GS+ + + +Y N N ++A+
Sbjct: 104 DEYLGVNATVKEGTEKKVTSTEKGVTFRGAWVEWPVGSQGQTVPYYFANYNFTLVATVSI 163
Query: 236 HN 237
HN
Sbjct: 164 HN 165
>M.Javanica_Scaff5g000129 on XP_807358 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 872
Score = 29.3 bits (64), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 182 NEEIGLNSTESQHHDKYLAS------FKGKRYVYGIGSETRDILHYLHNNNSVIIASTCR 235
+E +G+N+T + +K + S F+G + +GS+ + + +Y N N ++A+
Sbjct: 607 DEYLGVNATVKEGTEKKVTSTEKGVTFRGAWVEWPVGSQGQTVPYYFANYNFTLVATVSI 666
Query: 236 HN 237
HN
Sbjct: 667 HN 668
>M.Javanica_Scaff5g000129 on XP_001351877 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2270
Score = 26.6 bits (57), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 57/172 (33%), Gaps = 45/172 (26%)
Query: 59 PQSKIYSDILTVLRRSVYFTEDASEACLFILSVDTIDRDRISENYVKDLNSLISSLPKNI 118
P++ Y ++ V+ AS I + + I D I + + D N
Sbjct: 1901 PRAPKYKTLIEVVLEPSGKNTTASGKNTPIDTQNDIQSDGIPSSKITD----------NE 1950
Query: 119 WNNGLNHLIFNFYSGTFPN-----YSSNDLGFNPEKAMIAWTSSSRQHFRTDFDISIPLF 173
WN + I N PN YSS D+ FN + + + + F T
Sbjct: 1951 WNTLKDEFISNMLQSEQPNDVPNDYSSGDIPFNTQPNTLYFDKPEEKPFITSI------- 2003
Query: 174 HKEHPSISNEEIGLNSTESQHHDKYLASFKGKRYVYGIGSETRDILHYLHNN 225
HD+ L S G+ Y Y + + T D Y+ NN
Sbjct: 2004 ---------------------HDRNLLS--GEEYSYDMSTNTMDDPKYVSNN 2032
>M.Javanica_Scaff5g000129 on XP_821438 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 957
Score = 25.8 bits (55), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 182 NEEIGLNSTESQHHDKYLAS----FKGKRYVYGIGSETRDILHYLHNNNSVIIASTCRH 236
+E +G+N+T +++ AS F+G + +GS+ + L++ N+N ++A+ H
Sbjct: 535 DEYLGVNATVNKNDGATKASDGVTFQGAWAEWPVGSQGENQLYHFANHNFTLVATVSIH 593
>M.Javanica_Scaff5g000129 on XP_804819 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 266
Score = 25.0 bits (53), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Query: 187 LNSTESQHHDKYLAS------FKGKRYVYGIGSETRDILHYLHNNNSVIIASTCRHN 237
+N+T + +K + S F+G + +GS+ + + +Y N N ++A+ HN
Sbjct: 21 VNATVKKGTEKKVTSTEKGVTFRGAWVEWPVGSQGQTVPYYFANYNFTLVATVSIHN 77
>M.Javanica_Scaff5g000129 on XP_811702 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 776
Score = 25.0 bits (53), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Query: 181 SNEEIGLNSTESQHHDKYLA------SFKGKRYVYGIGSETRDILHYLHNNNSVIIASTC 234
S+E +G+N+T + + +F+G + +GS+ + L+Y N+N ++A+
Sbjct: 525 SDEYLGVNATVKKGTNGGATGYADGVTFRGAWAEWPVGSQGENQLYYFANHNFTLVATLS 584
Query: 235 RHN 237
H+
Sbjct: 585 VHD 587
>M.Javanica_Scaff5g000129 on XP_818190 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 807
Score = 25.0 bits (53), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 34/63 (53%), Gaps = 8/63 (12%)
Query: 177 HPSISNEEIGLNSTESQHHDKYLASFKGKRY--VYGIGSETRDILHYLHNNNSVIIASTC 234
+ ++SN++ G+ TE+ +FKG+ + +GS+ + L++ N+N ++A+
Sbjct: 546 NATVSNKDGGVEKTENG------VTFKGRGAWAEWPVGSQGENQLYHFANHNFTLVATVS 599
Query: 235 RHN 237
H
Sbjct: 600 IHG 602
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff488g006837
(251 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_806299 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.51
XP_001351080 PfEMP1 (Establishment) [Plasmodium falciparum] 28 0.51
XP_813123 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.91
XP_804686 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.8
XP_812068 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.0
XP_818394 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.5
XP_001351079 PfEMP1 (Establishment) [Plasmodium falciparum] 25 8.0
XP_001349033 PfEMP1 (Establishment) [Plasmodium falciparum] 24 9.5
>M.Javanica_Scaff488g006837 on XP_806299 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1047
Score = 28.1 bits (61), Expect = 0.51, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 181 QLDKLEWLWKFILNRKRHRGRDFGHFRFALNRIAHFYRCANTK 223
Q+D EW I++RK + + F +RI+HFY ++K
Sbjct: 641 QMDYDEW--TVIVDRKEIDHKSYDQSLFNFHRISHFYIGGDSK 681
>M.Javanica_Scaff488g006837 on XP_001351080 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2209
Score = 28.1 bits (61), Expect = 0.51, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 45 DKNLKKYKNVFINSLFSILQEYYFEGINK 73
+K++ KNV I +LF EY+FE N+
Sbjct: 1445 NKHIHDKKNVLIRTLFKRWLEYFFEDYNR 1473
>M.Javanica_Scaff488g006837 on XP_813123 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1048
Score = 27.3 bits (59), Expect = 0.91, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 187 WLWKFILNRKRHRGRDFGHFRFALNRIAHFYRCANTK 223
+ W ++NR+ + F +RI+HFY N+K
Sbjct: 643 YYWTVVVNREEIHKTKYNTSLFNSHRISHFYIGGNSK 679
>M.Javanica_Scaff488g006837 on XP_804686 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1045
Score = 26.6 bits (57), Expect = 1.8, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 189 WKFILNRKRHRGRDFGHFRFALNRIAHFYRCANTK 223
W +NR R + + F +RI+HFY ++K
Sbjct: 643 WTVFVNRYEIRQKRYDESLFNSHRISHFYIGGDSK 677
>M.Javanica_Scaff488g006837 on XP_812068 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 812
Score = 26.2 bits (56), Expect = 2.0, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 25/42 (59%)
Query: 69 EGINKKENDNLLIERINSVLDCVEDLSLTKRYSFVGAVLMSD 110
+G+ E D+ ++ R+N+ D V +SL+ ++ V +V + +
Sbjct: 528 DGVQLTEPDSRVMWRVNTRGDNVRHISLSHNFTLVASVTIEE 569
>M.Javanica_Scaff488g006837 on XP_818394 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1059
Score = 25.4 bits (54), Expect = 3.5, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 187 WLWKFILNRKRHRGRDFGHFRFALNRIAHFYRCANTK 223
+ W ++NR+ + F +RI+HFY ++K
Sbjct: 655 YYWTVVVNREEIHKTKYNTSLFNSHRISHFYIGGDSK 691
>M.Javanica_Scaff488g006837 on XP_001351079 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2203
Score = 24.6 bits (52), Expect = 8.0, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 39 NQTILDDKNLKKYKNVFINSLFSILQEYYFEGINK 73
N D K + + + I +LF I EY+ E NK
Sbjct: 1463 NGETFDAKKKGENQIIIIRALFKIWLEYFLEDYNK 1497
>M.Javanica_Scaff488g006837 on XP_001349033 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2064
Score = 24.3 bits (51), Expect = 9.5, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 57 NSLFSILQEYYFEGINKKENDNLLIERINSV 87
N+L IL+E +F+GI++ IERI ++
Sbjct: 647 NTLEYILEEDFFKGISEAYGSVDAIERIKNI 677
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff444g006341
(232 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff25255g090633
(208 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_819490 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.6
XP_821102 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 8.9
XP_001349035 PfEMP1 (Establishment) [Plasmodium falciparum] 24 9.5
>M.Javanica_Scaff25255g090633 on XP_819490 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 997
Score = 25.4 bits (54), Expect = 2.6, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 69 PTCEASAQARSDMCLVANNETEIGCFLGWNETYTVT 104
P+ SA+AR L+ G + WNET+ VT
Sbjct: 154 PSVGKSAKARDWGLLLVKGSVSGGNEITWNETHAVT 189
>M.Javanica_Scaff25255g090633 on XP_821102 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 929
Score = 23.9 bits (50), Expect = 8.9, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 16/36 (44%)
Query: 69 PTCEASAQARSDMCLVANNETEIGCFLGWNETYTVT 104
P SA AR L+ G + WNET+ VT
Sbjct: 153 PLVGKSANARDWGLLLVKGSVSGGNGITWNETHAVT 188
>M.Javanica_Scaff25255g090633 on XP_001349035 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2239
Score = 23.9 bits (50), Expect = 9.5, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Query: 82 CLVANNETEIGCFLGWNETYTV---TAFKTCLDNWWTEAIEYG 121
C V NN+T++ ++ET + T FK L+ +W + YG
Sbjct: 1445 CKVINNDTDVCKLTNFDETIDLNDYTTFKVFLE-YWLDDFLYG 1486
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff359g005319
(675 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_808161 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.67
>M.Javanica_Scaff359g005319 on XP_808161 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 885
Score = 29.6 bits (65), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 134 ERSIGRNKSLSLSSFSNSIRRLFPHSS 160
E GR+ SLS++S S SIR +PH S
Sbjct: 172 ETGPGRSGSLSMTSVSMSIRPPYPHES 198
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff8075g050593
(67 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_815479 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.19
XP_001608668 variant erythrocyte surface antigen-1, alpha subun... 25 0.41
XP_807444 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.55
XP_809010 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 0.59
XP_001611366 variant erythrocyte surface antigen-1, beta subuni... 24 0.63
XP_001609041 variant erythrocyte surface antigen-1, alpha subun... 24 0.86
XP_001609540 variant erythrocyte surface antigen-1, alpha subun... 24 0.90
XP_001610568 variant erythrocyte surface antigen-1, alpha subun... 24 0.98
XP_001611736 variant erythrocyte surface antigen-1, alpha subun... 23 1.3
XP_001352170 MSP1 (Invasion) [Plasmodium falciparum] 22 4.7
>M.Javanica_Scaff8075g050593 on XP_815479 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1047
Score = 25.8 bits (55), Expect = 0.19, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 16 SDASPGGPPCDYDNPCPTGYKCEDDECVKEIPPTTTTTKKPT-TTPKKSKI 65
SDA P D DN T + E VKE+P T T T TTP ++ I
Sbjct: 941 SDAEPTSAE-DTDNISRTEGEESSSEDVKEVPQTVDTAPGNTNTTPGETMI 990
>M.Javanica_Scaff8075g050593 on XP_001608668 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1337
Score = 25.0 bits (53), Expect = 0.41, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 18 ASPGGPPCDYDNPCPTGYKCE 38
S G PPC+ C G +C+
Sbjct: 188 GSSGQPPCECSGTCTAGKECQ 208
>M.Javanica_Scaff8075g050593 on XP_807444 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 777
Score = 24.6 bits (52), Expect = 0.55, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 35 YKCEDDECVKEIPPTTTTTKKPTTTP 60
+K DD K P+ T +PT+TP
Sbjct: 498 WKEVDDRVSKLCTPSNTEKDRPTSTP 523
>M.Javanica_Scaff8075g050593 on XP_809010 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 774
Score = 24.3 bits (51), Expect = 0.59, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 35 YKCEDDECVKEIPPTTTTTKKPTTTP 60
+K DD K P+ T +PT+TP
Sbjct: 496 WKEVDDRVSKLCTPSNTEKDRPTSTP 521
>M.Javanica_Scaff8075g050593 on XP_001611366 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1173
Score = 24.3 bits (51), Expect = 0.63, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
Query: 7 VFIQMWLVLSDASPGGPPCDYDNPCPTGYKCEDDECVKEIPPTTTTTKKPTTTPKKSK 64
V I + V+ S G P CP K + C+ E TT T K +T K K
Sbjct: 499 VVIWTYGVVGTGSTAGAP--EKKQCPEHSKDRNKRCILEDANKTTDTSKSQSTDGKLK 554
>M.Javanica_Scaff8075g050593 on XP_001609041 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1318
Score = 23.9 bits (50), Expect = 0.86, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 19 SPGGPPCDYDNPCPTGYKCEDDECVK-EIPPTTTTTK 54
S G C+Y + KC D EC+K ++P TK
Sbjct: 116 SGGSGKCEYLDDVEQSNKCADCECMKWKVPDAGDHTK 152
>M.Javanica_Scaff8075g050593 on XP_001609540 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1349
Score = 23.9 bits (50), Expect = 0.90, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
Query: 19 SPGGPPC-DYDNPCPTGYKCEDDECVKEIPPTTTTTKKP 56
SP P C + C G K E C K + PTTT P
Sbjct: 865 SPKCPGCTKHSTKC--GQKAESTICEKCLQPTTTGVPSP 901
>M.Javanica_Scaff8075g050593 on XP_001610568 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1329
Score = 23.9 bits (50), Expect = 0.98, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
Query: 19 SPGGPPCD-YDNPCPTGYKCEDDECVKEIPPTTTTTKKP 56
SP CD + C G K E C K + PTTT P
Sbjct: 851 SPKCSACDKHSTKC--GQKAESTICEKCLQPTTTGVPSP 887
>M.Javanica_Scaff8075g050593 on XP_001611736 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1365
Score = 23.5 bits (49), Expect = 1.3, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 19 SPGGPPCDYDNPCPTGYKCEDDECVKEIPPTTTTTKKP 56
SP CD + G K E C K + PTTT P
Sbjct: 866 SPKCSACD-QHSTKCGQKAESTICEKCLQPTTTGVPSP 902
>M.Javanica_Scaff8075g050593 on XP_001352170 MSP1 (Invasion) [Plasmodium falciparum]
Length = 1720
Score = 21.9 bits (45), Expect = 4.7, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 31 CPTGYKCEDDECVKEIPPT 49
C YK E D+CV+ PT
Sbjct: 1636 CLLNYKQEGDKCVENPNPT 1654
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5406g039321
(196 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum] 26 1.8
XP_815151 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.6
XP_807549 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 5.0
XP_813257 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 7.9
>M.Javanica_Scaff5406g039321 on XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3119
Score = 26.2 bits (56), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 160 CDKESEFQIKKDELRVKMFNFMNADGCDKE 189
CD + KD+LR K F ++ GC KE
Sbjct: 2175 CDGDGYDCTDKDKLRNKSFIYLQCSGCQKE 2204
>M.Javanica_Scaff5406g039321 on XP_815151 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 894
Score = 24.6 bits (52), Expect = 4.6, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 170 KDELRVKMFNFMNADGCDKESEFQLK 195
KD K+ N+M+ADGC S + K
Sbjct: 291 KDTQNWKLSNWMSADGCSDPSVVEWK 316
>M.Javanica_Scaff5406g039321 on XP_807549 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 894
Score = 24.6 bits (52), Expect = 5.0, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 170 KDELRVKMFNFMNADGCDKESEFQLK 195
KD K+ N+M+ADGC S + K
Sbjct: 291 KDTQNWKLSNWMSADGCSDPSVVEWK 316
>M.Javanica_Scaff5406g039321 on XP_813257 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 903
Score = 23.9 bits (50), Expect = 7.9, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 170 KDELRVKMFNFMNADGCDKESEFQLK 195
KD K+ N+M+ADGC S + K
Sbjct: 291 KDTKSWKLSNWMSADGCGDPSVVEWK 316
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4475g034786
(151 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_812339 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.89
XP_811703 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.0
XP_821693 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.7
XP_809607 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.5
XP_814186 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.2
XP_819146 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.5
XP_804289 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.6
XP_804902 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 6.7
XP_819012 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 7.9
XP_810496 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 8.4
>M.Javanica_Scaff4475g034786 on XP_812339 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 949
Score = 26.2 bits (56), Expect = 0.89, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 110 RQNFFSRRGKNCVNVRGGGRLLYHSEGVTPFLLEGSKKKG 149
R +F +R + GGG +Y +G F ++G+KKKG
Sbjct: 224 RASFGEQRQSWSRLIGGGGLGVYTDDGRLVFPVQGTKKKG 263
>M.Javanica_Scaff4475g034786 on XP_811703 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1043
Score = 26.2 bits (56), Expect = 1.0, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 59 EGETDKYDTFHFEEVEENNDENLGKYSLKVYKALNKNVCKFVVYCTHKLDQ 109
EG + YDT EE EE + + G S V +L+ + VY H++ Q
Sbjct: 839 EGSAESYDTQQPEEDEEADGRSGGSVS-PVAVSLSMDTATAPVYGEHQVQQ 888
>M.Javanica_Scaff4475g034786 on XP_821693 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 834
Score = 25.4 bits (54), Expect = 1.7, Method: Composition-based stats.
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 124 VRGGGRLLYHSEGVTPFLLEGSKKK 148
+ GGG L ++G F LEG+KKK
Sbjct: 259 IGGGGSGLKMNDGTLVFPLEGTKKK 283
>M.Javanica_Scaff4475g034786 on XP_809607 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 920
Score = 25.0 bits (53), Expect = 2.5, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 30/72 (41%)
Query: 24 KISWRDNPKGLQILANKTRHRFKVELGSNKWEFPKEGETDKYDTFHFEEVEENNDENLGK 83
KI W+D Q L + + +GS E ET + ++ E +E++
Sbjct: 213 KIDWKDTESPPQGLFGTQLNSWTRLIGSGGLGVKMEDETLVFPVEGTKKAAEGAEEDVKT 272
Query: 84 YSLKVYKALNKN 95
SL +Y + N N
Sbjct: 273 VSLIIYSSDNTN 284
>M.Javanica_Scaff4475g034786 on XP_814186 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 883
Score = 24.6 bits (52), Expect = 3.2, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 8/49 (16%)
Query: 101 VYCTHKLDQRQNFFSRRGKNCVNVRGGGRLLYHSEGVTPFLLEGSKKKG 149
V CT L +++N R + GGG + ++G F +EG+KK G
Sbjct: 221 VPCT--LGEKENSLKRL------IGGGGSGIKTNDGTLAFPVEGTKKDG 261
>M.Javanica_Scaff4475g034786 on XP_819146 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 825
Score = 24.3 bits (51), Expect = 4.5, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 124 VRGGGRLLYHSEGVTPFLLEGSKKK 148
+ GGG + +EG F +EG+KKK
Sbjct: 226 IGGGGSGVKMNEGTLVFPVEGTKKK 250
>M.Javanica_Scaff4475g034786 on XP_804289 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1048
Score = 24.3 bits (51), Expect = 4.6, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 59 EGETDKYDTFHFEEVEENNDENLGKYSLKVYKALNKNVCKFVVYCTHKLDQ 109
EG ++ YDT EE E ND + GK + V +L V H++ +
Sbjct: 845 EGSSESYDTPQPEEDGEANDRS-GKSTSSVASSLFMETATETVDSEHQVQK 894
>M.Javanica_Scaff4475g034786 on XP_804902 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1042
Score = 23.5 bits (49), Expect = 6.7, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 59 EGETDKYDTFHFEEVEENNDENLGKYSLKVYKALNKNVCKFVVYCTHKLDQ 109
EG ++ YDT E EE D+ G+ + V + + + V H++ Q
Sbjct: 838 EGSSESYDT-QLPEEEEEADDRSGESTSPVGASSDMDTATETVDSEHQVQQ 887
>M.Javanica_Scaff4475g034786 on XP_819012 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 918
Score = 23.5 bits (49), Expect = 7.9, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 126 GGGRLLYHSEGVTPFLLEGSKKKG 149
GGG + +G F +EG+KK+G
Sbjct: 239 GGGSGVLTDDGTLVFPVEGTKKEG 262
>M.Javanica_Scaff4475g034786 on XP_810496 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 943
Score = 23.5 bits (49), Expect = 8.4, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 124 VRGGGRLLYHSEGVTPFLLEGSKKK 148
+ GGG + ++G F LEG++KK
Sbjct: 241 IGGGGSGVKMNDGTIVFPLEGTRKK 265
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff25226g090581
(58 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609314 variant erythrocyte surface antigen-1, beta subuni... 23 1.7
XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum] 22 4.5
AAL38220 PfNBP1 (Adhesin) [Plasmodium falciparum] 21 7.0
AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum] 21 7.2
AAL38218 PfNBP1 (Adhesin) [Plasmodium falciparum] 21 7.2
AAL38222 PfNBP1 (Adhesin) [Plasmodium falciparum] 21 7.3
AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum] 21 7.3
XP_001351561 PfEMP1 (Establishment) [Plasmodium falciparum] 21 9.2
XP_001348946 PfEMP1 (Establishment) [Plasmodium falciparum] 21 9.2
>M.Javanica_Scaff25226g090581 on XP_001609314 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1115
Score = 22.7 bits (47), Expect = 1.7, Method: Composition-based stats.
Identities = 9/13 (69%), Positives = 10/13 (76%)
Query: 39 KEEENTHIKFLAN 51
K+EENTH K L N
Sbjct: 1026 KDEENTHFKNLIN 1038
>M.Javanica_Scaff25226g090581 on XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2980
Score = 21.6 bits (44), Expect = 4.5, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 13 VNNFCMPNVKNSIRLRRKSGHNLIKTKEEENTHIK 47
+NN + + KN K N KTKE+E ++K
Sbjct: 603 INNTNVTDCKNDCNTNCKCFENWAKTKEKEWENVK 637
>M.Javanica_Scaff25226g090581 on AAL38220 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2957
Score = 21.2 bits (43), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 5/41 (12%)
Query: 11 QDVNNFCMPNV----KNSIRLRRKSGHNLIKTKEEEN-THI 46
Q +NN+ N + +++ R GHNLI ++ N HI
Sbjct: 2407 QKINNYIQTNYNIINEEALQFHRLYGHNLISEDDKNNLVHI 2447
>M.Javanica_Scaff25226g090581 on AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2969
Score = 21.2 bits (43), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 5/41 (12%)
Query: 11 QDVNNFCMPNV----KNSIRLRRKSGHNLIKTKEEEN-THI 46
Q +NN+ N + +++ R GHNLI ++ N HI
Sbjct: 2409 QKINNYIQTNYNIINEEALQFHRLYGHNLISEDDKNNLVHI 2449
>M.Javanica_Scaff25226g090581 on AAL38218 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2977
Score = 21.2 bits (43), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 5/41 (12%)
Query: 11 QDVNNFCMPNV----KNSIRLRRKSGHNLIKTKEEEN-THI 46
Q +NN+ N + +++ R GHNLI ++ N HI
Sbjct: 2417 QKINNYIQTNYNIINEEALQFHRLYGHNLISEDDKNNLVHI 2457
>M.Javanica_Scaff25226g090581 on AAL38222 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2976
Score = 20.8 bits (42), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 5/41 (12%)
Query: 11 QDVNNFCMPNV----KNSIRLRRKSGHNLIKTKEEEN-THI 46
Q +NN+ N + +++ R GHNLI ++ N HI
Sbjct: 2420 QKINNYIQTNYNIINEEALQFHRLYGHNLISEDDKNNLVHI 2460
>M.Javanica_Scaff25226g090581 on AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2965
Score = 20.8 bits (42), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 5/41 (12%)
Query: 11 QDVNNFCMPNV----KNSIRLRRKSGHNLIKTKEEEN-THI 46
Q +NN+ N + +++ R GHNLI ++ N HI
Sbjct: 2413 QKINNYIQTNYNIINEEALQFHRLYGHNLISEDDKNNLVHI 2453
>M.Javanica_Scaff25226g090581 on XP_001351561 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3553
Score = 20.8 bits (42), Expect = 9.2, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 13 VNNFCMPNVKNSIRLRRKSGHNLIKTKEEENTHIK 47
+NN + + KN K N KTKE E +K
Sbjct: 606 INNTNVTDCKNDCNTNCKCFENWAKTKENEWKKVK 640
>M.Javanica_Scaff25226g090581 on XP_001348946 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3553
Score = 20.8 bits (42), Expect = 9.2, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 13 VNNFCMPNVKNSIRLRRKSGHNLIKTKEEENTHIK 47
+NN + + KN K N KTKE E +K
Sbjct: 606 INNTNVTDCKNDCNTNCKCFENWAKTKENEWKKVK 640
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6781g045408
(102 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001610721 variant erythrocyte surface antigen-1, alpha subun... 25 0.82
XP_843847 VSG (Establishment) [Trypanosoma brucei] 25 0.93
CAD21456 ESAG-7 (Establishment) [Trypanosoma brucei] 23 3.3
XP_001351563 PfEMP1 (Establishment) [Plasmodium falciparum] 23 3.6
XP_001609751 variant erythrocyte surface antigen-1, alpha subun... 23 4.8
CAD21778 ESAG-7 (Establishment) [Trypanosoma brucei] 22 7.2
CAD21779 ESAG-7 (Establishment) [Trypanosoma brucei] 22 7.2
XP_001609167 variant erythrocyte surface antigen-1, alpha subun... 22 7.5
XP_001610713 variant erythrocyte surface antigen-1, alpha subun... 22 7.6
XP_001609666 variant erythrocyte surface antigen-1, alpha subun... 22 7.7
XP_001348275 RAP1 (Invasion) [Plasmodium falciparum] 22 7.9
XP_001705755 ADI (Others) [Giardia duodenalis] 22 8.3
XP_001610568 variant erythrocyte surface antigen-1, alpha subun... 22 9.2
>M.Javanica_Scaff6781g045408 on XP_001610721 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1331
Score = 25.4 bits (54), Expect = 0.82, Method: Composition-based stats.
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 65 GWMNMGAGYGVRPVGWRPWRTGGGGRH 91
GW G V+ +GW P + G GG++
Sbjct: 1024 GWCASGLRQEVQNIGWIPQKEGDGGQY 1050
>M.Javanica_Scaff6781g045408 on XP_843847 VSG (Establishment) [Trypanosoma brucei]
Length = 407
Score = 25.0 bits (53), Expect = 0.93, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 24/64 (37%), Gaps = 8/64 (12%)
Query: 24 SAETNSDNNEGRLKRFGG--------WGGGTYRYGPCGYGGCHGYGSGGGWMNMGAGYGV 75
+AE +D + +K G W G R CGY G G GG + +
Sbjct: 94 TAEVANDFDSSAMKVLYGSDSDGSLNWTGKEKREADCGYTSIFGGGFGGKALALDLLCLC 153
Query: 76 RPVG 79
RP G
Sbjct: 154 RPSG 157
>M.Javanica_Scaff6781g045408 on CAD21456 ESAG-7 (Establishment) [Trypanosoma brucei]
Length = 338
Score = 23.5 bits (49), Expect = 3.3, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 36 LKRFGGWGGGTYRYGPCGYGGCHGYGSGGGWMNMGAGYGVR 76
L R WGGG +G C G GG + ++G+ VR
Sbjct: 231 LNRNFTWGGGVLNFGYCVAGNLK--IKGGEYGDVGSHDAVR 269
>M.Javanica_Scaff6781g045408 on XP_001351563 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2149
Score = 23.5 bits (49), Expect = 3.6, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 14/30 (46%)
Query: 27 TNSDNNEGRLKRFGGWGGGTYRYGPCGYGG 56
TN + G K G GG T R PCG G
Sbjct: 59 TNKPCDFGYDKLISGRGGVTARGDPCGKDG 88
>M.Javanica_Scaff6781g045408 on XP_001609751 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1298
Score = 23.1 bits (48), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 65 GWMNMGAGYGVRPVGWRPWRTGGGGRH 91
GW G V+ +GW P + GG++
Sbjct: 995 GWCASGLRDEVKKIGWIPKKEEDGGKY 1021
>M.Javanica_Scaff6781g045408 on CAD21778 ESAG-7 (Establishment) [Trypanosoma brucei]
Length = 340
Score = 22.3 bits (46), Expect = 7.2, Method: Composition-based stats.
Identities = 7/14 (50%), Positives = 8/14 (57%)
Query: 42 WGGGTYRYGPCGYG 55
WGGG +G C G
Sbjct: 239 WGGGVMNFGSCVAG 252
>M.Javanica_Scaff6781g045408 on CAD21779 ESAG-7 (Establishment) [Trypanosoma brucei]
Length = 340
Score = 22.3 bits (46), Expect = 7.2, Method: Composition-based stats.
Identities = 7/14 (50%), Positives = 8/14 (57%)
Query: 42 WGGGTYRYGPCGYG 55
WGGG +G C G
Sbjct: 239 WGGGVMNFGSCVAG 252
>M.Javanica_Scaff6781g045408 on XP_001609167 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1317
Score = 22.3 bits (46), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 65 GWMNMGAGYGVRPVGWRPWRTGGGGRH 91
GW G V+ + W P + G GG++
Sbjct: 1021 GWCASGLRDEVKKIEWIPKKDGDGGQY 1047
>M.Javanica_Scaff6781g045408 on XP_001610713 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1294
Score = 22.3 bits (46), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 65 GWMNMGAGYGVRPVGWRPWRTGGGGRH 91
GW G V+ + W P + G GG++
Sbjct: 983 GWCASGLRDEVKKIEWIPKKDGDGGQY 1009
>M.Javanica_Scaff6781g045408 on XP_001609666 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1269
Score = 22.3 bits (46), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 65 GWMNMGAGYGVRPVGWRPWRTGGGGRH 91
GW G V+ + W P+ T GG++
Sbjct: 968 GWCASGLRDEVKKIEWIPFDTKPGGQY 994
>M.Javanica_Scaff6781g045408 on XP_001348275 RAP1 (Invasion) [Plasmodium falciparum]
Length = 782
Score = 22.3 bits (46), Expect = 7.9, Method: Composition-based stats.
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 10 FVLTLLVIYTNLINSAETNSDNNEGR 35
V+ V++ N+ + N DNN G+
Sbjct: 8 LVIIFHVLFRNVADGINVNGDNNYGK 33
>M.Javanica_Scaff6781g045408 on XP_001705755 ADI (Others) [Giardia duodenalis]
Length = 255
Score = 22.3 bits (46), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 45 GTYRYGPCGYGGCHGYGSGGGWMNMGAGYGVRPVGWR 81
G G C GG H GG ++ + G + VG R
Sbjct: 209 GARVVGDCREGGPHCMLEGGDFVPVSPGLAMMGVGLR 245
>M.Javanica_Scaff6781g045408 on XP_001610568 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1329
Score = 22.3 bits (46), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 65 GWMNMGAGYGVRPVGWRPWRTGGGGRH 91
GW G V+ + W P + G GG++
Sbjct: 1034 GWCASGLRDEVKNIEWIPKKDGDGGKY 1060
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3001g026543
(647 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff28683g095390
(166 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum] 25 2.0
>M.Javanica_Scaff28683g095390 on XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2178
Score = 25.4 bits (54), Expect = 2.0, Method: Composition-based stats.
Identities = 11/19 (57%), Positives = 12/19 (63%)
Query: 48 LIGHKLVNKELPKTNFPDI 66
L HK+V KE P TN DI
Sbjct: 510 LCHHKIVQKEYPDTNTTDI 528
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff465g006610
(653 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum] 45 2e-05
AAG32024 MIC10 (Others) [Toxoplasma gondii] 41 6e-05
XP_814930 Trans-sialidase (Invasion) [Trypanosoma cruzi] 33 0.042
PFE0340c ROM4 (Invasion) [Plasmodium falciparum] 30 0.34
XP_001351080 PfEMP1 (Establishment) [Plasmodium falciparum] 30 0.59
XP_803401 VSG (Establishment) [Trypanosoma brucei] 28 1.5
XP_001350082 Rh2b (Adhesin) [Plasmodium falciparum] 28 2.3
XP_820135 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 4.9
XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum] 26 8.3
XP_814927 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 9.0
>M.Javanica_Scaff465g006610 on XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum]
Length = 3130
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 102/140 (72%), Gaps = 11/140 (7%)
Query: 460 KKKGKEEKDKKKKEKEDKKKKEKEDKDKKKEEKDKKKEDKDDKNKKEKEEKDKKKKEKED 519
+++ ++E++ K++E+E + ++EK+++ +K+EE ++++++ K + K ++ ++ +++E+
Sbjct: 2744 QERLQKEEELKRQEQE-RLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEE 2802
Query: 520 KDKKKEEKEDKKKQEKEEKDK--KKKEKEDKKKQE---KEEKDKKKKEKEDKKKEKEEKD 574
++++E+ +++KQE+ +K++ K++E+E +K+E ++E+++ +KE+E K++E+E +
Sbjct: 2803 LKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQERLE 2862
Query: 575 KKK-----KDKKNKSKDDSD 589
+KK +++ KSK +SD
Sbjct: 2863 RKKIELAEREQHIKSKLESD 2882
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 95/138 (68%), Gaps = 12/138 (8%)
Query: 458 DKKKKGKEEKDKKKKEKEDKKKKEKEDKDKKKEEKDKKKEDKDDKNKKEKEEKDKKKKEK 517
+K+++ ++E++ K++E+E + +KE+ K++E++ +KE++ + ++E+ E++K+++ +
Sbjct: 2764 EKQEQLQKEEELKRQEQE---RLQKEEALKRQEQERLQKEEELKRQEQERLEREKQEQLQ 2820
Query: 518 EDKDKKKEEKEDKKKQE---KEEKDKKKKEKEDKKKQEKEEKDKKK---KEKEDKKKEKE 571
++++ K++E+E +K+E ++E+++ +KE E+ K+QE+E ++KK E+E K K
Sbjct: 2821 KEEELKRQEQERLQKEEALKRQEQERLQKE-EELKRQEQERLERKKIELAEREQHIKSKL 2879
Query: 572 EKDKKK--KDKKNKSKDD 587
E D K KD+ K KD+
Sbjct: 2880 ESDMVKIIKDELTKEKDE 2897
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 74/103 (71%), Gaps = 8/103 (7%)
Query: 479 KKEKEDKDKKKEEKDKKKEDKDDKNKKEKEEKDKKKKEKEDKDKKKEEKEDKKKQEKEEK 538
K++++++ +K+EE ++++++ ++ K+E+ +K+++ K +E + +KEE +++QE+ +K
Sbjct: 2740 KRQEQERLQKEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQK 2799
Query: 539 DKKKKEKEDKKKQEKEEKDKKKKEKEDKKKE--KEEKDKKKKD 579
+ E+ K+QE+E +++K+E+ K++E ++E+++ +K+
Sbjct: 2800 E------EELKRQEQERLEREKQEQLQKEEELKRQEQERLQKE 2836
Score = 31.2 bits (69), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 86/139 (61%), Gaps = 32/139 (23%)
Query: 475 EDKKKKEKEDKD-------------------------KKKEEKDKKKEDKDDKNKKEKEE 509
++K++ E+E ++ K++E++ +KE++ + ++E+ E
Sbjct: 2703 QEKERLEREKQEQLKKEEELRKKEQERQEQQQKEEALKRQEQERLQKEEELKRQEQERLE 2762
Query: 510 KDKKKKEKEDKDKKKEEKEDKKKQE---KEEKDKKKKEKEDKKKQ----EKEEKDKKKKE 562
++K+++ +++++ K++E+E +K+E ++E+++ +KE+E K+++ E+E++++ +KE
Sbjct: 2763 REKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQERLEREKQEQLQKE 2822
Query: 563 KEDKKKEKEEKDKKKKDKK 581
+E K++E+E K++ K+
Sbjct: 2823 EELKRQEQERLQKEEALKR 2841
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 82/120 (68%), Gaps = 15/120 (12%)
Query: 479 KKEKEDKDKKKEEKDKKKEDKDDKNKKE-----------KEEKDKKKKEKEDKDKKKEEK 527
K+EKE +++K+E+ KK+E+ K ++ ++E+++ +KE+E K +++E
Sbjct: 2702 KQEKERLEREKQEQLKKEEELRKKEQERQEQQQKEEALKRQEQERLQKEEELKRQEQERL 2761
Query: 528 E-DKKKQEKEEKDKKKKEKEDKKKQE---KEEKDKKKKEKEDKKKEKEEKDKKKKDKKNK 583
E +K++Q ++E++ K++E+E +K+E ++E+++ +KE+E K++E+E +++K+++ K
Sbjct: 2762 EREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQERLEREKQEQLQK 2821
Score = 27.3 bits (59), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 69/116 (59%), Gaps = 20/116 (17%)
Query: 464 KEEKDKKKKEKEDKKKKEKEDKDKKKEEKDKKKEDKDDKNKKEKEEKDKKKKEKEDKDKK 523
++E+++ ++EK+++ +KE+E K++E++ +KE+ +++E+++ +KE
Sbjct: 2805 RQEQERLEREKQEQLQKEEEL--KRQEQERLQKEE-----ALKRQEQERLQKE------- 2850
Query: 524 KEEKEDKKKQEKEEKDKKKKEKEDKKKQ--EKEEKDKKKKEKEDKKKEKEEKDKKK 577
E+ K+QE+E ++KK E ++++ K E D K K++ KEK+E K K
Sbjct: 2851 ----EELKRQEQERLERKKIELAEREQHIKSKLESDMVKIIKDELTKEKDEIIKNK 2902
>M.Javanica_Scaff465g006610 on AAG32024 MIC10 (Others) [Toxoplasma gondii]
Length = 198
Score = 41.2 bits (95), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 80/145 (55%), Gaps = 1/145 (0%)
Query: 433 ECSYGHKKENNEDDDDDNTKEDDHDDKKKKGKEEKDKKKKEKEDKKKKEKEDKDKKKEEK 492
+ S G N+ D D+ ++ + + + +E ++ K+K E+ ++K +ED + K++++
Sbjct: 52 QASIGEHDFFNDYDQDEEYRKRHEELQNQSPEEVEEAKRKYHEELRRKAEEDAETKRKQE 111
Query: 493 DKKKEDKDDKNKKEKEEKDKKKKEKEDKDKKKEEKEDKKKQEKEEKDKKKKEKEDKKKQE 552
+E K+ K+ E ++++++ D+ + E+ ++ ++ + +++ ++ KK QE
Sbjct: 112 AVIQELKEVAKKRGLREAAEREEKRIDEQQANYEQRQQELRDMDSAMEERLMQQRKKDQE 171
Query: 553 KEEKDKKKKEK-EDKKKEKEEKDKK 576
+ E +K +K ++ KEK + +K
Sbjct: 172 ERELARKNSDKVMEELKEKLARRRK 196
Score = 41.2 bits (95), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 75/134 (55%)
Query: 468 DKKKKEKEDKKKKEKEDKDKKKEEKDKKKEDKDDKNKKEKEEKDKKKKEKEDKDKKKEEK 527
D + E+ K+ +E +++ ++ E+ K+K ++ + K E++ + K+K+E ++ K+ K
Sbjct: 63 DYDQDEEYRKRHEELQNQSPEEVEEAKRKYHEELRRKAEEDAETKRKQEAVIQELKEVAK 122
Query: 528 EDKKKQEKEEKDKKKKEKEDKKKQEKEEKDKKKKEKEDKKKEKEEKDKKKKDKKNKSKDD 587
+ ++ E ++K+ E++ +Q ++E E++ ++ +KD+++++ K+ D
Sbjct: 123 KRGLREAAEREEKRIDEQQANYEQRQQELRDMDSAMEERLMQQRKKDQEERELARKNSDK 182
Query: 588 SDEDDHKKCSCKDK 601
E+ +K + + K
Sbjct: 183 VMEELKEKLARRRK 196
Score = 39.7 bits (91), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 74/126 (58%), Gaps = 2/126 (1%)
Query: 455 DHDDKKKKGKEEKDKKKKEKEDKKKKEKEDKDKKKEEKDKKKEDKDDKNKKEKEEKDKKK 514
D D++ +K EE + E+ ++ K++ ++ ++K E+D + + K + +E +E KK+
Sbjct: 65 DQDEEYRKRHEELQNQSPEEVEEAKRKYHEELRRKAEEDAETKRKQEAVIQELKEVAKKR 124
Query: 515 --KEKEDKDKKKEEKEDKKKQEKEEKDKKKKEKEDKKKQEKEEKDKKKKEKEDKKKEKEE 572
+E ++++K+ +++ ++++++ + +++ ++ +KD++++E K +K
Sbjct: 125 GLREAAEREEKRIDEQQANYEQRQQELRDMDSAMEERLMQQRKKDQEERELARKNSDKVM 184
Query: 573 KDKKKK 578
++ K+K
Sbjct: 185 EELKEK 190
Score = 39.3 bits (90), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 74/132 (56%), Gaps = 8/132 (6%)
Query: 454 DDHDDKKKKGKEEKDKKKKEKEDKKKKEKEDKDKKKEEKDKKKEDKDDKNKKEKEEKDKK 513
D ++ +K+ +E +++ +E E+ K+K E+ +K EE D + K K+E ++ K
Sbjct: 65 DQDEEYRKRHEELQNQSPEEVEEAKRKYHEELRRKAEE------DAETKRKQEAVIQELK 118
Query: 514 KKEKEDKDKKKEEKEDKKKQEKEEKDKKKKEKEDKKKQEKEEK--DKKKKEKEDKKKEKE 571
+ K+ ++ E+E+K+ E++ ++++++ EE+ ++KK++E+++ ++
Sbjct: 119 EVAKKRGLREAAEREEKRIDEQQANYEQRQQELRDMDSAMEERLMQQRKKDQEERELARK 178
Query: 572 EKDKKKKDKKNK 583
DK ++ K K
Sbjct: 179 NSDKVMEELKEK 190
Score = 37.0 bits (84), Expect = 0.001, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 498 DKDDKNKKEKEEKDKKKKEKEDKDKKKEEKEDKKKQEKEEKDKKKKEK--EDKKKQEKEE 555
D+D++ +K EE + E+ ++ K+K +E ++K E++ + K+K+E ++ K+ K+
Sbjct: 65 DQDEEYRKRHEELQNQSPEEVEEAKRKYHEELRRKAEEDAETKRKQEAVIQELKEVAKKR 124
Query: 556 KDKKKKEKEDKKKEKEEKDKKKKDKKNKSKDDSDEDDHKKCSCKDKKK 603
++ E+E+K+ ++++ + +++ ++ + D + E+ + KD+++
Sbjct: 125 GLREAAEREEKRIDEQQANYEQRQQELRDMDSAMEERLMQQRKKDQEE 172
Score = 35.8 bits (81), Expect = 0.003, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 52/89 (58%)
Query: 503 NKKEKEEKDKKKKEKEDKDKKKEEKEDKKKQEKEEKDKKKKEKEDKKKQEKEEKDKKKKE 562
N +++E+ +K+ E+ +E +E K+K +E + K +++ E K+KQE ++ K+
Sbjct: 62 NDYDQDEEYRKRHEELQNQSPEEVEEAKRKYHEELRRKAEEDAETKRKQEAVIQELKEVA 121
Query: 563 KEDKKKEKEEKDKKKKDKKNKSKDDSDED 591
K+ +E E+++K+ D++ + + ++
Sbjct: 122 KKRGLREAAEREEKRIDEQQANYEQRQQE 150
>M.Javanica_Scaff465g006610 on XP_814930 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 938
Score = 33.5 bits (75), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 469 KKKKEKEDKKKKEKEDKDKKKEEKDK--KKEDKDDKNKKEKEEKDKKKKEKEDKDKKKE- 525
K KE EDKK+K D + KKE D KKE D ++KK + + KK+ + +DKK+
Sbjct: 756 KMIKEVEDKKEKGSGDSEDKKESGDSEDKKESGDSEDKKGSGDSEDKKESGDSEDKKESG 815
Query: 526 EKEDKK 531
+ EDKK
Sbjct: 816 DSEDKK 821
Score = 32.3 bits (72), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 504 KKEKEEKDKKKKEKEDKDKKKE--EKEDKKKQEKEEKDKKKKEKEDKKKQEKEEKDKKKK 561
K KE +DKK+K D + KKE + EDKK+ E K + EDKK+ E K+
Sbjct: 756 KMIKEVEDKKEKGSGDSEDKKESGDSEDKKESGDSEDKKGSGDSEDKKESGDSEDKKESG 815
Query: 562 EKEDKK 567
+ EDKK
Sbjct: 816 DSEDKK 821
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 512 KKKKEKEDK-DKKKEEKEDKKKQEKEEKDKKKKEKEDKKKQEKEEKDKKKKEKEDKKKEK 570
K KE EDK +K + EDKK+ E K+ + EDKK E K+ + EDKK+
Sbjct: 756 KMIKEVEDKKEKGSGDSEDKKESGDSEDKKESGDSEDKKGSGDSEDKKESGDSEDKKESG 815
Query: 571 EEKDKK 576
+ +DKK
Sbjct: 816 DSEDKK 821
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 475 EDKKKKEKEDK-DKKKEEKDKKKEDKDDKNKKEKEEKDKKKKEKEDKDKKKEEKEDKKKQ 533
E K KE EDK +K + + KKE D ++KKE + + KK + +DKK+ + KK+
Sbjct: 754 ELKMIKEVEDKKEKGSGDSEDKKESGDSEDKKESGDSEDKKGSGDSEDKKESGDSEDKKE 813
Query: 534 EKEEKDKK 541
+ +DKK
Sbjct: 814 SGDSEDKK 821
Score = 30.4 bits (67), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 457 DDKKKKGKEEKDKKKKEKEDKKKKEKEDKDKKKEEKDK--KKEDKDDKNKKEKEEKDKKK 514
+DKK+KG + + KK+ + + KKE D + KK D KKE D ++KKE + + KK
Sbjct: 762 EDKKEKGSGDSEDKKESGDSEDKKESGDSEDKKGSGDSEDKKESGDSEDKKESGDSEDKK 821
Score = 30.4 bits (67), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 439 KKENNEDDDDDNTKEDDHDDKKKKGKEEKDKKKKEKEDKKKK-EKEDKDKKKEEKDKK 495
KKE D +D + D +DKK+ G E K + EDKK+ + EDK + + +DKK
Sbjct: 764 KKEKGSGDSEDKKESGDSEDKKESGDSEDKKGSGDSEDKKESGDSEDKKESGDSEDKK 821
Score = 29.6 bits (65), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 464 KEEKDKKKKEKEDKK-KKEKEDKDKKKEEKDK--KKEDKDDKNKKEKEEKDKKKKEKEDK 520
KE +DKK+K D + KKE D + KKE D KK D ++KKE + + KK+ + +
Sbjct: 759 KEVEDKKEKGSGDSEDKKESGDSEDKKESGDSEDKKGSGDSEDKKESGDSEDKKESGDSE 818
Query: 521 DKK 523
DKK
Sbjct: 819 DKK 821
Score = 29.6 bits (65), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 532 KQEKEEKDKKKK---EKEDKKKQEKEEKDKKKKEKEDKKKEKEEKDKKKKDKKNKSKDDS 588
K KE +DKK+K + EDKK+ E K+ + EDKK + +DKK+ K+
Sbjct: 756 KMIKEVEDKKEKGSGDSEDKKESGDSEDKKESGDSEDKKGSGDSEDKKESGDSEDKKESG 815
Query: 589 DEDDHK 594
D +D K
Sbjct: 816 DSEDKK 821
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 35/74 (47%)
Query: 432 KECSYGHKKENNEDDDDDNTKEDDHDDKKKKGKEEKDKKKKEKEDKKKKEKEDKDKKKEE 491
+ S G K E +D D +DKK+ G E K+ + EDKK + K+ +
Sbjct: 748 RPLSVGELKMIKEVEDKKEKGSGDSEDKKESGDSEDKKESGDSEDKKGSGDSEDKKESGD 807
Query: 492 KDKKKEDKDDKNKK 505
+ KKE D ++KK
Sbjct: 808 SEDKKESGDSEDKK 821
Score = 26.2 bits (56), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 522 KKKEEKEDKKKQEKEEKDKKKK--EKEDKKKQEKEEKDKKKKEKEDKKKEKEEKDKKK 577
K +E EDKK++ + + KK+ + EDKK+ E K + EDKK+ + +DKK+
Sbjct: 756 KMIKEVEDKKEKGSGDSEDKKESGDSEDKKESGDSEDKKGSGDSEDKKESGDSEDKKE 813
Score = 25.8 bits (55), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 540 KKKKEKEDKKKQEKEEKDKKKK--EKEDKKKEKEEKDKKKKDKKNKSKDDSDEDDHKKCS 597
K KE EDKK++ + + KK+ + EDKK+ + +DKK K+ D +D K+
Sbjct: 756 KMIKEVEDKKEKGSGDSEDKKESGDSEDKKESGDSEDKKGSGDSEDKKESGDSEDKKESG 815
Query: 598 CKDKKK 603
+ KK
Sbjct: 816 DSEDKK 821
>M.Javanica_Scaff465g006610 on PFE0340c ROM4 (Invasion) [Plasmodium falciparum]
Length = 759
Score = 30.4 bits (67), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 73/160 (45%), Gaps = 9/160 (5%)
Query: 456 HDDKKKKGKEEKDKKKKEKEDKKKKEKEDKDKKKEEKDKKKEDKDDKNKKEKEEK----- 510
++ +KKK K K + E+KKK+ + + + + N EK+E
Sbjct: 38 NNMEKKKMTIFKKTKGENNEEKKKRSIFNNNNNNNNNNNTMKINIFNNNNEKKESFSING 97
Query: 511 -DKKKKEKEDKDKKKEEKEDKKKQEKEEKDKKKKEKEDKKKQEKEEKDKKKKEKEDKKKE 569
+KKK + D+KKE ++KE K EK++ K+EK+K D+KKE
Sbjct: 98 DEKKKSFSINGDEKKESFSINGDEKKESFLINKDEKKESFLINKDEKEKSFSINGDEKKE 157
Query: 570 KEEKDKKKKDKKNKSKDDSDEDDHKKCSCKDKKKPPSPWA 609
+ D+K +S ++++ K CS D ++ S ++
Sbjct: 158 SFSING---DEKKESFSINEDETKKSCSINDDERKISIFS 194
Score = 25.8 bits (55), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 67/141 (47%), Gaps = 7/141 (4%)
Query: 414 IVVSDNDKEENECYCDDGKECSYGHKKENNEDDDDDNTKEDDHDDKKKKGKEEKDKKKKE 473
I + +N+ E+ E + +G E K + D+ + + D+KK+ KD+KK+
Sbjct: 80 INIFNNNNEKKESFSINGDE---KKKSFSINGDEKKESFSINGDEKKESFLINKDEKKES 136
Query: 474 ----KEDKKKKEKEDKDKKKEEKDKKKEDKDDKNKKEKEEKDKKKKEKEDKDKKKEEKED 529
K++K+K + D+KKE ++K + ++E K +D+ K +
Sbjct: 137 FLINKDEKEKSFSINGDEKKESFSINGDEKKESFSINEDETKKSCSINDDERKISIFSNN 196
Query: 530 KKKQEKEEKDKKKKEKEDKKK 550
+KK+ D + ++ED+K+
Sbjct: 197 EKKKNSIYSDTQSSKREDEKR 217
>M.Javanica_Scaff465g006610 on XP_001351080 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2209
Score = 30.0 bits (66), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 31/84 (36%), Gaps = 8/84 (9%)
Query: 182 KCIGGNSGGSASTSQTPEASKASTILPSNTEAPVVSTKSSIGGGSSIGPVVTSKPSGAPV 241
KC+ G S P S S +P V+ + + GG + S + PV
Sbjct: 874 KCVPTTRG-----SGEPTGSSGSICVPPRRRRLYVTPLTRLAGGGNTAASQGSGEAAQPV 928
Query: 242 VSTKSAIGGGSTIGPVVTSKPSGA 265
T+ GG+T V P GA
Sbjct: 929 TVTQPQASGGNT---QVAVSPGGA 949
>M.Javanica_Scaff465g006610 on XP_803401 VSG (Establishment) [Trypanosoma brucei]
Length = 493
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 529 DKKKQEKEEKDKKKKEKEDKKKQEKEEKDKKKKEKEDKKKEKEEKDKKKKDKKNKSKDDS 588
D KQ+ E KK +E E KK E K K+KEKE K K+++D K K +
Sbjct: 380 DLNKQKLAETAKKLQEAEFKK----ETKSAKEKEKEGNTKGKDKQDGCDKLKDQGCVFNK 435
Query: 589 DEDDHKKCS 597
D +D +KC+
Sbjct: 436 DGNDGEKCT 444
>M.Javanica_Scaff465g006610 on XP_001350082 Rh2b (Adhesin) [Plasmodium falciparum]
Length = 1115
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 37/52 (71%), Gaps = 4/52 (7%)
Query: 531 KKQEKEEKDKKKKEKEDKKKQEKEEKDKKKKEKEDKKKEKEEKDKKKKDKKN 582
K+QE+E K+ E+ K+QE+E +++K+E+ K++E +K+++K+ ++N
Sbjct: 600 KRQEQERLQKE----EELKRQEQERLEREKQEQLQKEEELRKKEQEKQQQRN 647
Score = 27.3 bits (59), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 47/59 (79%)
Query: 504 KKEKEEKDKKKKEKEDKDKKKEEKEDKKKQEKEEKDKKKKEKEDKKKQEKEEKDKKKKE 562
K++++E+ +K++E + +++++ E+E +++ +KEE+ +KK++++ +++ +E +++KK E
Sbjct: 600 KRQEQERLQKEEELKRQEQERLEREKQEQLQKEEELRKKEQEKQQQRNIQELEEQKKPE 658
>M.Javanica_Scaff465g006610 on XP_820135 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1519
Score = 26.9 bits (58), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 4/129 (3%)
Query: 462 KGKEEKDKKKKEKEDKKKKEKEDKDKKKEEKDKKKEDKDDKNKKEK--EEKDKKKKEKED 519
K E K + K E K + K + K E K + + + K+ + K E K + K E
Sbjct: 989 KSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKSAEP 1048
Query: 520 KDKKKEEKEDKKKQEK--EEKDKKKKEKEDKKKQEKEEKDKKKKEKEDKKKEKEEKDKKK 577
K + + E K ++K E K ++K E K ++K + K + K + K E+K +
Sbjct: 1049 KPAEPKPAEPKPAEQKSAESKPAEQKSAESKPAEQKSAESKPAEPKSAEPKPAEQKSAES 1108
Query: 578 KDKKNKSKD 586
K + KS +
Sbjct: 1109 KPAEQKSAE 1117
>M.Javanica_Scaff465g006610 on XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2238
Score = 26.2 bits (56), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 10/83 (12%)
Query: 188 SGGSASTSQTPEASKASTILPSNTEAPVVSTKSSIGGGSSIGPVVTSKPSGAPVVSTKSA 247
SGGS +T+ S S +P + +GG + +S+ GAP VS +
Sbjct: 921 SGGSGATT----TSSGSICVPPRRR------RLYVGGLTKWAEKQSSQGGGAPQVSPSAT 970
Query: 248 IGGGSTIGPVVTSKPSGAPVVST 270
GS P++ + + + T
Sbjct: 971 ASSGSQSDPLLLTAFVESAAIET 993
>M.Javanica_Scaff465g006610 on XP_814927 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 759
Score = 25.8 bits (55), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 469 KKKKEKEDKKKKEKEDKDKKKEEKDK--KKEDKDDKNKK 505
K KE EDKK+K D + KKE D KKE D ++KK
Sbjct: 692 KMIKEVEDKKEKGSGDSEDKKESGDSEDKKESGDSEDKK 730
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3775g031118
(569 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001352170 MSP1 (Invasion) [Plasmodium falciparum] 28 1.3
XP_805896 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 3.6
>M.Javanica_Scaff3775g031118 on XP_001352170 MSP1 (Invasion) [Plasmodium falciparum]
Length = 1720
Score = 28.5 bits (62), Expect = 1.3, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 20/46 (43%)
Query: 57 ATTTPSNMPTTTTASTTTSTATNLATGASGVGLDTSSAASLAPANV 102
+T++P N T S T S + N + AS A S PA V
Sbjct: 912 STSSPGNTTVNTAQSATHSNSQNQQSNASSTNTQNGVAVSSGPAVV 957
>M.Javanica_Scaff3775g031118 on XP_805896 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 692
Score = 26.9 bits (58), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 26/70 (37%), Gaps = 7/70 (10%)
Query: 68 TTASTTTSTATNLATGASGVGLDTSSAASLAPANVTIINYIYSNNSVTQSANSFATSNST 127
T S TST + +A +G P Y ++NN T SA F
Sbjct: 498 TVGSGVTSTESGVALKGAGAEWPVGDMGQTVP-------YYFTNNKFTLSATVFIHEVPK 550
Query: 128 SGSCPCVLVN 137
+GS P L+
Sbjct: 551 AGSIPVPLIG 560
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff63g001326
(192 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum] 28 0.31
XP_001351563 PfEMP1 (Establishment) [Plasmodium falciparum] 28 0.47
XP_813677 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.49
AAW78133 TRAP (Invasion) [Plasmodium falciparum] 27 0.63
AAW78165 TRAP (Invasion) [Plasmodium falciparum] 27 0.77
AAA29771 TRAP (Invasion) [Plasmodium falciparum] 27 0.87
AAW78147 TRAP (Invasion) [Plasmodium falciparum] 27 0.93
AAA29774 TRAP (Invasion) [Plasmodium falciparum] 27 0.95
AAW78168 TRAP (Invasion) [Plasmodium falciparum] 27 0.96
XP_965997 PfEMP1 (Establishment) [Plasmodium falciparum] 27 1.0
AAW78130 TRAP (Invasion) [Plasmodium falciparum] 26 1.3
AAA29776 TRAP (Invasion) [Plasmodium falciparum] 26 1.3
AAW78164 TRAP (Invasion) [Plasmodium falciparum] 26 1.4
AAQ11895 TRAP (Invasion) [Plasmodium falciparum] 26 1.6
AAQ11892 TRAP (Invasion) [Plasmodium falciparum] 26 1.6
AAA29770 TRAP (Invasion) [Plasmodium falciparum] 26 1.6
AAA29777 TRAP (Invasion) [Plasmodium falciparum] 26 1.6
AAW78146 TRAP (Invasion) [Plasmodium falciparum] 26 1.6
AAW78174 TRAP (Invasion) [Plasmodium falciparum] 26 1.7
AAQ11891 TRAP (Invasion) [Plasmodium falciparum] 26 1.7
AAQ11894 TRAP (Invasion) [Plasmodium falciparum] 26 1.8
AAW78148 TRAP (Invasion) [Plasmodium falciparum] 26 1.8
XP_001350413 PfEMP1 (Establishment) [Plasmodium falciparum] 26 2.3
XP_001349437 PfEMP1 (Establishment) [Plasmodium falciparum] 25 2.6
XP_820135 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.6
XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum] 25 2.7
XP_965999 PfEMP1 (Establishment) [Plasmodium falciparum] 24 5.9
XP_813237 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 7.0
XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum] 24 9.2
>M.Javanica_Scaff63g001326 on XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2994
Score = 28.5 bits (62), Expect = 0.31, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 8/44 (18%)
Query: 7 ILLVFSLMDIGDILEGMDSHTS--------RRNLRHRRKNKYDN 42
I L S DIGDIL G D + R+ L ++ K+ +DN
Sbjct: 182 IALARSFADIGDILRGKDMYVGYDEKEKNRRKQLENKLKDIFDN 225
>M.Javanica_Scaff63g001326 on XP_001351563 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2149
Score = 27.7 bits (60), Expect = 0.47, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 8 LLVFSLMDIGDILEGMDSHTSRRNLRHRRKNKYDNS 43
+L S DIGDI+ G D ++ + + + K +N+
Sbjct: 184 MLARSFADIGDIVRGKDLYSGNKKKKQTEREKLENN 219
>M.Javanica_Scaff63g001326 on XP_813677 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 945
Score = 27.7 bits (60), Expect = 0.49, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 9/60 (15%)
Query: 42 NSPILPP---------QGGTSTSKHPPASHKLTIAPEPSAPRLSNPPMPSSPLSNPLEPS 92
N+ ++PP Q +S++ PP+ HKL E + ++P PS+ ++ E S
Sbjct: 741 NNVLIPPVVPDNAQGTQSQSSSAGQPPSGHKLLNENEGAVGGSTSPSTPSTITNSGKEQS 800
>M.Javanica_Scaff63g001326 on AAW78133 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 27.3 bits (59), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 33/87 (37%), Gaps = 13/87 (14%)
Query: 36 RKNKYDNSPILPPQGGTSTSKHPPASHKLTIAPEPSAPRLSNPPMPSSPLSNPLEPSEQE 95
KN DN+P P P L PE NPP P P P P + E
Sbjct: 317 EKNIIDNNPQEPSPNPEEGKGENPNGFDLDENPE-------NPPNPDIPEQKPNIPEDSE 369
Query: 96 VHLETITDLFKVPFAPEDALRQQNLDV 122
+ + VP PED R++N D+
Sbjct: 370 KEVPS-----DVPKNPEDD-REENFDI 390
>M.Javanica_Scaff63g001326 on AAW78165 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 26.9 bits (58), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 13/87 (14%)
Query: 36 RKNKYDNSPILPPQGGTSTSKHPPASHKLTIAPEPSAPRLSNPPMPSSPLSNPLEPSEQE 95
++N DN+P P P L PE NPP P P P P + E
Sbjct: 317 KENIIDNNPQEPSPNPEEGKDENPNGFDLDENPE-------NPPNPDIPQQEPNIPEDSE 369
Query: 96 VHLETITDLFKVPFAPEDALRQQNLDV 122
+ + VP PED R++N D+
Sbjct: 370 KEVPS-----DVPKNPEDD-REENFDI 390
>M.Javanica_Scaff63g001326 on AAA29771 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 26.9 bits (58), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 33/86 (38%), Gaps = 13/86 (15%)
Query: 37 KNKYDNSPILPPQGGTSTSKHPPASHKLTIAPEPSAPRLSNPPMPSSPLSNPLEPSEQEV 96
KN DN+P P P L PE NPP P P P P + E
Sbjct: 318 KNIIDNNPQEPSPNPEEGKGENPNGFDLDENPE-------NPPNPDIPERKPNIPEDSEK 370
Query: 97 HLETITDLFKVPFAPEDALRQQNLDV 122
+ + VP PED R++N D+
Sbjct: 371 EVPS-----DVPKNPEDD-REENFDI 390
>M.Javanica_Scaff63g001326 on AAW78147 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 26.6 bits (57), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 13/87 (14%)
Query: 36 RKNKYDNSPILPPQGGTSTSKHPPASHKLTIAPEPSAPRLSNPPMPSSPLSNPLEPSEQE 95
++N DN+P P P L PE NPP P P P P + E
Sbjct: 317 KENIIDNNPQEPSPNPEEGKDENPNGFDLDENPE-------NPPNPDIPEQKPNIPEDSE 369
Query: 96 VHLETITDLFKVPFAPEDALRQQNLDV 122
+ + VP PED R++N D+
Sbjct: 370 KEVPS-----DVPKNPEDD-REENFDI 390
>M.Javanica_Scaff63g001326 on AAA29774 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 26.6 bits (57), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 13/87 (14%)
Query: 36 RKNKYDNSPILPPQGGTSTSKHPPASHKLTIAPEPSAPRLSNPPMPSSPLSNPLEPSEQE 95
++N DN+P P P L PE NPP P P P P + E
Sbjct: 317 KENIIDNNPQEPSPNPEEGKGENPNGFDLDENPE-------NPPNPDIPEQEPNIPEDSE 369
Query: 96 VHLETITDLFKVPFAPEDALRQQNLDV 122
+ + VP PED R++N D+
Sbjct: 370 KEVPS-----DVPKNPEDD-REENFDI 390
>M.Javanica_Scaff63g001326 on AAW78168 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 26.6 bits (57), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 13/87 (14%)
Query: 36 RKNKYDNSPILPPQGGTSTSKHPPASHKLTIAPEPSAPRLSNPPMPSSPLSNPLEPSEQE 95
++N DN+P P P L PE NPP P P P P + E
Sbjct: 317 KENIIDNNPQEPSPNPEEGKDENPNGFDLDENPE-------NPPNPDIPEQKPNIPEDSE 369
Query: 96 VHLETITDLFKVPFAPEDALRQQNLDV 122
+ + VP PED R++N D+
Sbjct: 370 KEVPS-----DVPKNPEDD-REENFDI 390
>M.Javanica_Scaff63g001326 on XP_965997 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2879
Score = 26.6 bits (57), Expect = 1.0, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 11 FSLMDIGDILEGMDSHTSRRNLRHRRKNKYD 41
+S D+GDI+ G D + ++H +K+ D
Sbjct: 901 YSFADLGDIIRGRDMWDNETGMKHAKKHLKD 931
Score = 24.6 bits (52), Expect = 4.8, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Query: 8 LLVFSLMDIGDILEGMD---SHTSR-RNLRHRRKNKYDN 42
+L S DIGDI+ G D H R R L K ++N
Sbjct: 172 VLARSFADIGDIVRGKDLFLGHQQRKRKLEENLKQMFEN 210
>M.Javanica_Scaff63g001326 on AAW78130 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 26.2 bits (56), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 33/87 (37%), Gaps = 13/87 (14%)
Query: 36 RKNKYDNSPILPPQGGTSTSKHPPASHKLTIAPEPSAPRLSNPPMPSSPLSNPLEPSEQE 95
+N DN+P P P L PE NPP P P P P + E
Sbjct: 317 EENIIDNNPQEPSPNPEEGKDENPNGFDLDENPE-------NPPNPDIPQQEPNIPEDSE 369
Query: 96 VHLETITDLFKVPFAPEDALRQQNLDV 122
+ + VP PED R++N D+
Sbjct: 370 KEVPS-----DVPKNPEDD-REENFDI 390
>M.Javanica_Scaff63g001326 on AAA29776 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 26.2 bits (56), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 33/86 (38%), Gaps = 13/86 (15%)
Query: 37 KNKYDNSPILPPQGGTSTSKHPPASHKLTIAPEPSAPRLSNPPMPSSPLSNPLEPSEQEV 96
+N DN+P P P L PE NPP P P P P + E
Sbjct: 318 ENIIDNNPQEPSPNPEEGKGENPKGFDLDENPE-------NPPNPDIPQQEPNIPEDSEK 370
Query: 97 HLETITDLFKVPFAPEDALRQQNLDV 122
+ + VP PED R++N D+
Sbjct: 371 EVPS-----DVPKNPEDD-REENFDI 390
>M.Javanica_Scaff63g001326 on AAW78164 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 26.2 bits (56), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 33/86 (38%), Gaps = 13/86 (15%)
Query: 37 KNKYDNSPILPPQGGTSTSKHPPASHKLTIAPEPSAPRLSNPPMPSSPLSNPLEPSEQEV 96
+N DN+P P P L PE NPP P P P P + E
Sbjct: 318 ENIIDNNPQEPSPNPEEGKGENPNGFDLDENPE-------NPPNPDIPQQEPNIPEDSEK 370
Query: 97 HLETITDLFKVPFAPEDALRQQNLDV 122
+ + VP PED R++N D+
Sbjct: 371 EVPS-----DVPKNPEDD-REENFDI 390
>M.Javanica_Scaff63g001326 on AAQ11895 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 26.2 bits (56), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 33/86 (38%), Gaps = 13/86 (15%)
Query: 37 KNKYDNSPILPPQGGTSTSKHPPASHKLTIAPEPSAPRLSNPPMPSSPLSNPLEPSEQEV 96
+N DN+P P P L PE NPP P P P P + E
Sbjct: 318 ENIIDNNPQEPSPNPEEGKGENPNGFDLDENPE-------NPPNPDIPQQEPNIPEDSEK 370
Query: 97 HLETITDLFKVPFAPEDALRQQNLDV 122
+ + VP PED R++N D+
Sbjct: 371 EVPS-----DVPKNPEDD-REENFDI 390
>M.Javanica_Scaff63g001326 on AAQ11892 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 26.2 bits (56), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 33/87 (37%), Gaps = 13/87 (14%)
Query: 36 RKNKYDNSPILPPQGGTSTSKHPPASHKLTIAPEPSAPRLSNPPMPSSPLSNPLEPSEQE 95
+N DN+P P P L PE NPP P P P P + E
Sbjct: 317 EENIIDNNPQEPSPNPEEGKGENPNGFDLDENPE-------NPPNPDIPQQEPNIPEDSE 369
Query: 96 VHLETITDLFKVPFAPEDALRQQNLDV 122
+ + VP PED R++N D+
Sbjct: 370 KEVPS-----DVPKNPEDD-REENFDI 390
>M.Javanica_Scaff63g001326 on AAA29770 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 26.2 bits (56), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 33/87 (37%), Gaps = 13/87 (14%)
Query: 36 RKNKYDNSPILPPQGGTSTSKHPPASHKLTIAPEPSAPRLSNPPMPSSPLSNPLEPSEQE 95
+N DN+P P P L PE NPP P P P P + E
Sbjct: 317 EENIIDNNPQEPSPNPEEGKGENPNGFDLDENPE-------NPPNPDIPEQEPNIPEDSE 369
Query: 96 VHLETITDLFKVPFAPEDALRQQNLDV 122
+ + VP PED R++N D+
Sbjct: 370 KEVPS-----DVPKNPEDD-REENFDI 390
>M.Javanica_Scaff63g001326 on AAA29777 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 25.8 bits (55), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 33/87 (37%), Gaps = 13/87 (14%)
Query: 36 RKNKYDNSPILPPQGGTSTSKHPPASHKLTIAPEPSAPRLSNPPMPSSPLSNPLEPSEQE 95
+N DN+P P P L PE NPP P P P P + E
Sbjct: 317 EENIIDNNPQEPSPNPEEGKGENPNGFDLDENPE-------NPPNPDIPEQEPNIPEDSE 369
Query: 96 VHLETITDLFKVPFAPEDALRQQNLDV 122
+ + VP PED R++N D+
Sbjct: 370 KEVPS-----DVPKNPEDD-REENFDI 390
>M.Javanica_Scaff63g001326 on AAW78146 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 25.8 bits (55), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 33/87 (37%), Gaps = 13/87 (14%)
Query: 36 RKNKYDNSPILPPQGGTSTSKHPPASHKLTIAPEPSAPRLSNPPMPSSPLSNPLEPSEQE 95
+N DN+P P P L PE NPP P P P P + E
Sbjct: 317 EENIIDNNPQEPSPNPEEGKDENPNGFDLDENPE-------NPPNPDIPEQKPNIPEDSE 369
Query: 96 VHLETITDLFKVPFAPEDALRQQNLDV 122
+ + VP PED R++N D+
Sbjct: 370 KEVPS-----DVPKNPEDD-REENFDI 390
>M.Javanica_Scaff63g001326 on AAW78174 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 25.8 bits (55), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 33/86 (38%), Gaps = 13/86 (15%)
Query: 37 KNKYDNSPILPPQGGTSTSKHPPASHKLTIAPEPSAPRLSNPPMPSSPLSNPLEPSEQEV 96
+N DN+P P P L PE NPP P P P P + E
Sbjct: 318 ENIIDNNPQEPSPNPEEGKDENPNGFDLDENPE-------NPPNPDIPEQKPNIPEDSEK 370
Query: 97 HLETITDLFKVPFAPEDALRQQNLDV 122
+ + VP PED R++N D+
Sbjct: 371 EVPS-----DVPKNPEDD-REENFDI 390
>M.Javanica_Scaff63g001326 on AAQ11891 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 25.8 bits (55), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 33/86 (38%), Gaps = 13/86 (15%)
Query: 37 KNKYDNSPILPPQGGTSTSKHPPASHKLTIAPEPSAPRLSNPPMPSSPLSNPLEPSEQEV 96
+N DN+P P P L PE NPP P P P P + E
Sbjct: 318 ENIIDNNPQEPSPNPEEGKGENPNGFDLDENPE-------NPPNPDIPEQEPNIPEDSEK 370
Query: 97 HLETITDLFKVPFAPEDALRQQNLDV 122
+ + VP PED R++N D+
Sbjct: 371 EVPS-----DVPKNPEDD-REENFDI 390
>M.Javanica_Scaff63g001326 on AAQ11894 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 25.8 bits (55), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 33/87 (37%), Gaps = 13/87 (14%)
Query: 36 RKNKYDNSPILPPQGGTSTSKHPPASHKLTIAPEPSAPRLSNPPMPSSPLSNPLEPSEQE 95
+N DN+P P P L PE NPP P P P P + E
Sbjct: 317 EENIIDNNPQEPSPNPEEGKGENPNGFDLDENPE-------NPPNPDIPEQEPNIPEDSE 369
Query: 96 VHLETITDLFKVPFAPEDALRQQNLDV 122
+ + VP PED R++N D+
Sbjct: 370 KEVPS-----DVPKNPEDD-REENFDI 390
>M.Javanica_Scaff63g001326 on AAW78148 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 25.8 bits (55), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 33/87 (37%), Gaps = 13/87 (14%)
Query: 36 RKNKYDNSPILPPQGGTSTSKHPPASHKLTIAPEPSAPRLSNPPMPSSPLSNPLEPSEQE 95
+N DN+P P P L PE NPP P P P P + E
Sbjct: 317 EENIIDNNPQEPSPNPEEGKGENPNGFDLDENPE-------NPPNPDIPQQEPNIPEDSE 369
Query: 96 VHLETITDLFKVPFAPEDALRQQNLDV 122
+ + VP PED R++N D+
Sbjct: 370 KEVPS-----DVPKNPEDD-REENFDI 390
>M.Javanica_Scaff63g001326 on XP_001350413 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2860
Score = 25.8 bits (55), Expect = 2.3, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 11 FSLMDIGDILEGMD--SHTSRRNLRHRRKNKYDN 42
+S DIGDI+ G D H + L++ K+ + N
Sbjct: 931 YSFADIGDIIRGRDMWEHKDQTTLQNHLKSVFKN 964
Score = 25.4 bits (54), Expect = 3.1, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 5/38 (13%)
Query: 11 FSLMDIGDILEGMDSHTSRRN-----LRHRRKNKYDNS 43
+S D+GDI+ G D + N L+ KN YD++
Sbjct: 1796 YSFADLGDIIRGRDIYIGNNNQIENKLQQVFKNIYDSN 1833
>M.Javanica_Scaff63g001326 on XP_001349437 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2231
Score = 25.4 bits (54), Expect = 2.6, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 9 LVFSLMDIGDILEGMDSHTSRRNLRHRRKNKYD 41
L S DIGDI+ G D + + + +RK D
Sbjct: 183 LARSFADIGDIVRGRDLYGGSKKEKEKRKQLDD 215
>M.Javanica_Scaff63g001326 on XP_820135 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1519
Score = 25.4 bits (54), Expect = 2.6, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 8/58 (13%)
Query: 42 NSPILPPQGGTSTSKHPPASHKLTIAPEPSAPRLSNP----PMPSSPLSNPLEPSEQE 95
N +PP S P + + P+P+ P+ + P P P+ P S +P+EQ+
Sbjct: 686 NKVTIPP----PKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKPAEPKSAEPKPAEQK 739
>M.Javanica_Scaff63g001326 on XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3954
Score = 25.4 bits (54), Expect = 2.7, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 35/94 (37%), Gaps = 8/94 (8%)
Query: 16 IGDILEGMDSHTSRRNLRHRRKN---KYDNSPILPPQGGTSTSKHPP--ASHKLTIAPEP 70
+ D+ E D + + KN KY + T+ S P AS L+ +PE
Sbjct: 1697 VKDLFENKDDNKFTEACSTKYKNGKEKYTQWKCINDSSNTTRSSPPAPVASSTLSTSPEA 1756
Query: 71 SAPRLSNPPMPSSPLSNPLEP---SEQEVHLETI 101
A PP PL+ +E +V L I
Sbjct: 1757 GASATCIPPRRQQMYIQPLQSLSGNESQVELRRI 1790
Score = 23.9 bits (50), Expect = 7.6, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Query: 11 FSLMDIGDILEG---MDSHTSRRNLRHRRK--NKYDNSPILPPQGGTSTSKH 57
++ DIGDI++G MD T ++ K +K N+P P + KH
Sbjct: 2874 YTFADIGDIIKGNDMMDDMTYKKIKGKLEKVLDKTGNNPETPEKWWEQNKKH 2925
>M.Javanica_Scaff63g001326 on XP_965999 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1325
Score = 24.3 bits (51), Expect = 5.9, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 7 ILLVFSLMDIGDILEGMDSHTSRRNLRH 34
I L S DIGDI+ G D S N+ +
Sbjct: 187 IALARSFADIGDIVRGKDMFKSNDNVEN 214
>M.Javanica_Scaff63g001326 on XP_813237 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1496
Score = 24.3 bits (51), Expect = 7.0, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 6/55 (10%)
Query: 45 ILPPQGGTSTSKHPPASHKLTIAPEPSAPRLSNP----PMPSSPLSNPLEPSEQE 95
I PP+ P ++ P+P+ P+ + P P P+ P P EP E
Sbjct: 692 IPPPKSAEPKPAEPKSAEPKPAEPKPAEPKPAEPKPAEPKPAEP--KPAEPKPAE 744
>M.Javanica_Scaff63g001326 on XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1711
Score = 23.9 bits (50), Expect = 9.2, Method: Composition-based stats.
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 2 KYKLFILLVFSLMDIGDILEGMD 24
K +L +L S DIGDI+ G D
Sbjct: 172 KSQLCTVLARSFADIGDIIRGKD 194
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5062g037642
(68 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ABA06443 MSA-2a/b (Invasion) [Babesia bovis] 23 2.2
ABA06473 MSA-2b (Invasion) [Babesia bovis] 22 4.1
XP_001348153 MAEBL (Adhesin) [Plasmodium falciparum] 22 4.3
ABA06448 MSA-2a/b T-1 (Invasion) [Babesia bovis] 22 5.2
ABA06441 MSA-2a/b (Invasion) [Babesia bovis] 22 5.6
AAL15426 MSA-2a2 (Invasion) [Babesia bovis] 22 5.9
AAL15425 MSA-2a1 (Invasion) [Babesia bovis] 22 6.2
ABA06451 MSA-2a2 (Invasion) [Babesia bovis] 22 6.9
AAL15423 MSA-2b (Invasion) [Babesia bovis] 22 6.9
ABA06450 MSA-2a1 (Invasion) [Babesia bovis] 21 8.4
AAL15421 MSA-2a1 (Invasion) [Babesia bovis] 21 8.4
AAL15422 MSA-2a2 (Invasion) [Babesia bovis] 21 8.9
>M.Javanica_Scaff5062g037642 on ABA06443 MSA-2a/b (Invasion) [Babesia bovis]
Length = 270
Score = 22.7 bits (47), Expect = 2.2, Method: Composition-based stats.
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 25 RFSNTILQSHSYFNRNYKNFN 45
+F N L S S F R YK FN
Sbjct: 171 KFCNDFLDSKSPFMRIYKAFN 191
>M.Javanica_Scaff5062g037642 on ABA06473 MSA-2b (Invasion) [Babesia bovis]
Length = 316
Score = 21.9 bits (45), Expect = 4.1, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 25 RFSNTILQSHSYFNRNYKNFN 45
+F N L S S F R YK+ N
Sbjct: 171 KFCNDFLDSKSPFMRLYKHLN 191
>M.Javanica_Scaff5062g037642 on XP_001348153 MAEBL (Adhesin) [Plasmodium falciparum]
Length = 2054
Score = 21.9 bits (45), Expect = 4.3, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 17 KSEI-NPPNRFSNTILQSHSYFNRNYKNFNMQNSFPP 52
K+E+ N PN + I + HS F N N + +SF P
Sbjct: 504 KNEVKNYPNNNISYIQKVHSSFVNNRFNIHSDSSFKP 540
>M.Javanica_Scaff5062g037642 on ABA06448 MSA-2a/b T-1 (Invasion) [Babesia bovis]
Length = 284
Score = 21.6 bits (44), Expect = 5.2, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 25 RFSNTILQSHSYFNRNYKNFN 45
+F N L S S F R YK+ N
Sbjct: 171 KFCNDFLDSESPFMRIYKDLN 191
>M.Javanica_Scaff5062g037642 on ABA06441 MSA-2a/b (Invasion) [Babesia bovis]
Length = 278
Score = 21.6 bits (44), Expect = 5.6, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 25 RFSNTILQSHSYFNRNYKNFN 45
+F N L S S F R YK+ N
Sbjct: 171 KFCNDFLDSESPFMRIYKDLN 191
>M.Javanica_Scaff5062g037642 on AAL15426 MSA-2a2 (Invasion) [Babesia bovis]
Length = 281
Score = 21.6 bits (44), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 25 RFSNTILQSHSYFNRNYKNFN 45
+F N L S S F + YK FN
Sbjct: 171 KFCNDYLDSESPFMKIYKAFN 191
>M.Javanica_Scaff5062g037642 on AAL15425 MSA-2a1 (Invasion) [Babesia bovis]
Length = 311
Score = 21.6 bits (44), Expect = 6.2, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 25 RFSNTILQSHSYFNRNYKNFN 45
+F N L S S F R YK+ N
Sbjct: 171 KFCNDFLDSKSPFMRIYKDLN 191
>M.Javanica_Scaff5062g037642 on ABA06451 MSA-2a2 (Invasion) [Babesia bovis]
Length = 287
Score = 21.6 bits (44), Expect = 6.9, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 25 RFSNTILQSHSYFNRNYKNFN 45
+F N L S S F + YK FN
Sbjct: 171 KFCNDYLDSESPFMKMYKAFN 191
>M.Javanica_Scaff5062g037642 on AAL15423 MSA-2b (Invasion) [Babesia bovis]
Length = 287
Score = 21.6 bits (44), Expect = 6.9, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 25 RFSNTILQSHSYFNRNYKNFN 45
+F N L S S F + YK FN
Sbjct: 171 KFCNDYLDSESPFMKMYKAFN 191
>M.Javanica_Scaff5062g037642 on ABA06450 MSA-2a1 (Invasion) [Babesia bovis]
Length = 316
Score = 21.2 bits (43), Expect = 8.4, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 25 RFSNTILQSHSYFNRNYKNFN 45
+F N L S S F R YK+ N
Sbjct: 171 KFCNDFLDSKSPFMRLYKHLN 191
>M.Javanica_Scaff5062g037642 on AAL15421 MSA-2a1 (Invasion) [Babesia bovis]
Length = 316
Score = 21.2 bits (43), Expect = 8.4, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 25 RFSNTILQSHSYFNRNYKNFN 45
+F N L S S F R YK+ N
Sbjct: 171 KFCNDFLDSKSPFMRLYKHLN 191
>M.Javanica_Scaff5062g037642 on AAL15422 MSA-2a2 (Invasion) [Babesia bovis]
Length = 292
Score = 21.2 bits (43), Expect = 8.9, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 25 RFSNTILQSHSYFNRNYKNFN 45
+F N L S S F R YK+ N
Sbjct: 171 KFCNDFLDSKSPFMRLYKHLN 191
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff31120g098321
(166 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350797 PfEMP1 (Establishment) [Plasmodium falciparum] 24 7.5
O00834 MIC1 (Adhesin) [Toxoplasma gondii] 23 7.6
>M.Javanica_Scaff31120g098321 on XP_001350797 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2287
Score = 23.9 bits (50), Expect = 7.5, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 20/33 (60%)
Query: 22 EFIQSFCSVPHANDFEWVSARFSSHPQQEHIFV 54
+FI S C+ + +W++ + + + +QE I+V
Sbjct: 1322 DFIGSSCATSCSYYRKWINTKKAEYEKQEKIYV 1354
>M.Javanica_Scaff31120g098321 on O00834 MIC1 (Adhesin) [Toxoplasma gondii]
Length = 255
Score = 23.5 bits (49), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 7 SNYSNNKYIYNKCPDEFIQSFCSVPHANDFEWVSARF 43
SN++ I +K +E +Q FCS A+ ++ + +F
Sbjct: 122 SNHATRHEILSKLVEEGVQRFCSPYQASANKYCNDKF 158
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3468g029326
(111 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_808639 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.6
>M.Javanica_Scaff3468g029326 on XP_808639 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 949
Score = 23.5 bits (49), Expect = 3.6, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 15/20 (75%)
Query: 57 KRVPYRDNGVLAINSVGRRK 76
KR+ ++DNG ++ SVG R+
Sbjct: 214 KRIKWKDNGDVSRISVGERQ 233
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff30789g097924
(74 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAK69358 P0 (Invasion) [Toxoplasma gondii] 22 5.5
>M.Javanica_Scaff30789g097924 on AAK69358 P0 (Invasion) [Toxoplasma gondii]
Length = 314
Score = 21.9 bits (45), Expect = 5.5, Method: Composition-based stats.
Identities = 10/39 (25%), Positives = 21/39 (53%)
Query: 34 QKSIEIARKSKRIGLILGTLGRQGNIKIFEVIYRIKYIY 72
Q + + ++ ++ TL ++ NIK FE I+++Y
Sbjct: 156 QNEVHLIKEGDKVTASAATLLQKLNIKPFEYGLAIQHVY 194
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff827g010320
(348 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAM45250 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum] 27 1.5
AAM45258 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum] 27 1.5
AAM45253 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum] 27 1.5
AAM45255 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum] 27 1.5
AAL23761 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum] 27 1.5
XP_818092 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.5
AAK49521 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum] 27 2.6
>M.Javanica_Scaff827g010320 on AAM45250 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum]
Length = 616
Score = 27.3 bits (59), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 77 PLANQHQIHHMLLFGCEMPGSDEPAWDC 104
+A+Q ++ + FGC ++E +W+C
Sbjct: 301 DIASQINVNDLRGFGCNYKSNNEKSWNC 328
>M.Javanica_Scaff827g010320 on AAM45258 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum]
Length = 616
Score = 27.3 bits (59), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 77 PLANQHQIHHMLLFGCEMPGSDEPAWDC 104
+A+Q ++ + FGC ++E +W+C
Sbjct: 301 DIASQINVNDLRGFGCNYKSNNEKSWNC 328
>M.Javanica_Scaff827g010320 on AAM45253 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum]
Length = 616
Score = 27.3 bits (59), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 77 PLANQHQIHHMLLFGCEMPGSDEPAWDC 104
+A+Q ++ + FGC ++E +W+C
Sbjct: 301 DIASQINVNDLRGFGCNYKSNNEKSWNC 328
>M.Javanica_Scaff827g010320 on AAM45255 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum]
Length = 616
Score = 27.3 bits (59), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 77 PLANQHQIHHMLLFGCEMPGSDEPAWDC 104
+A+Q ++ + FGC ++E +W+C
Sbjct: 301 DIASQINVNDLRGFGCNYKSNNEKSWNC 328
>M.Javanica_Scaff827g010320 on AAL23761 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum]
Length = 616
Score = 27.3 bits (59), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 77 PLANQHQIHHMLLFGCEMPGSDEPAWDC 104
+A+Q ++ + FGC ++E +W+C
Sbjct: 301 DIASQINVNDLRGFGCNYKSNNEKSWNC 328
>M.Javanica_Scaff827g010320 on XP_818092 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 884
Score = 26.6 bits (57), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 293 IIKIGPTGEDEMCNFYLMYWTETGGQTLKE 322
I+ IGP +D+ L+Y + GG KE
Sbjct: 412 IVDIGPVSDDDAAASSLLYKSAEGGTDKKE 441
>M.Javanica_Scaff827g010320 on AAK49521 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum]
Length = 1210
Score = 26.6 bits (57), Expect = 2.6, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 78 LANQHQIHHMLLFGCEMPGSDEPAWDC-GEMSSSNAGYSRSP 118
+A+Q ++ + FGC ++E +W+C G ++ G P
Sbjct: 442 IASQINVNDLRGFGCNYKSNNEKSWNCTGTFTNKFPGTCEPP 483
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff289g004454
(1064 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_813586 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.75
XP_813237 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 1.2
XP_820135 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 4.2
>M.Javanica_Scaff289g004454 on XP_813586 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1748
Score = 30.4 bits (67), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 601 AAPSPAAAAPAESPPAAASP-QQSPAAPAPAESAPAAAAPAENAPAAASP-QQSPAAAAP 658
A P PA PAE PA P + PA P PAE PA PAE PA P + PA P
Sbjct: 1250 AEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKP 1309
Query: 659 AESAPAQAQPAAAPSPAAEAPA 680
AE PA+ +P A P PA PA
Sbjct: 1310 AEPKPAEPKP-AEPKPAEPKPA 1330
Score = 30.0 bits (66), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 600 AAAPSPAAAAPAESPPAAASP-QQSPAAPAPAESAPAAAAPAENAPAAASP-QQSPAAAA 657
+A P PA PAE PA P + PA P PAE PA PAE PA P + PA
Sbjct: 1529 SAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPK 1588
Query: 658 PAESAPAQAQPA 669
PAE PA+ +PA
Sbjct: 1589 PAEPKPAEPKPA 1600
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 103/227 (45%), Gaps = 26/227 (11%)
Query: 464 ESAAPVPAAAQSAS-APAEQKPAETAPAAAQNA-PAPAAETPAAAAPSSGASAPAESAAP 521
+SA P PA +SA PAE KPAE PA + A P PA PA P+ A +SA P
Sbjct: 1438 KSAEPKPAEPKSAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEP 1497
Query: 522 AQGAAPTEQKPAETAPAPAEAAPAKSAAPAEAAPAAAASPAATGGGYSGAAAEATAPASA 581
P E KPAE P PAE PA PAE PA S AE
Sbjct: 1498 K----PAEPKPAE--PKPAEPKPA-EPKPAEPKPAEPKS------------AEPKPAEPK 1538
Query: 582 AAAPSPAAGE--ATAPSANAAAAPSPAAAAPAESPPAAASP-QQSPAAPAPAESAPAAAA 638
A P PA + P+ A P PA PAE PA P + PA P PAE PA
Sbjct: 1539 PAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPK 1598
Query: 639 PAENAPAA-ASPQQSPAAAAPAESAPAQAQPAAAPSPAAEAPATGSA 684
PAE PA S + PA PAE PA+ +P A P PA PA +A
Sbjct: 1599 PAEPKPAEPKSAEPKPAEPKPAEPKPAEPKP-AEPKPAEPKPAEPNA 1644
Score = 28.1 bits (61), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 100/259 (38%), Positives = 115/259 (44%), Gaps = 30/259 (11%)
Query: 432 SAAVPSTGGASYSGGAAAAESSAPAQSAAAPAESAAPVPAAAQSAS-APAEQKPAETAPA 490
+++VPS G AS AE PA+ A + A P PA + A PAE KPAE PA
Sbjct: 742 TSSVPSGGAASTPAEPKPAEPK-PAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPA 800
Query: 491 AAQNA-PAPAAETPAAAAPSSGASAPAESAAPAQGAAPTEQKPAETAPA---PAEAAPAK 546
+ A P PA PA P+ A + A P P E KPAE PA PAE PA
Sbjct: 801 EPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP----KPAEPKPAEPKPAEPKPAEPKPA- 855
Query: 547 SAAPAEAAPAAAASPAATGGGYSGAAAEATAPASAA---AAPSPAAGEATAPSANAAAAP 603
PAE PA S A + P A A P PA + P A P
Sbjct: 856 EPKPAEPKPAEPKS----------AEPKPAEPKPAEPKPAEPKPAEPKPVEPK---PAEP 902
Query: 604 SPAAAAPAESPPAAASP-QQSPAAPAPAESAPAAAAPAENAPAAASP-QQSPAAAAPAES 661
PA PAE PA P + PA P PAE PA PAE PA P + PA PAE
Sbjct: 903 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 962
Query: 662 APAQAQPAAAPSPAAEAPA 680
PA+ +P A P PA PA
Sbjct: 963 KPAEPKP-AEPKPAEPKPA 980
Score = 27.7 bits (60), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 600 AAAPSPAAAAPAESPPAAASP-QQSPAAPAPAESAPAAAAPAENAPAAASP-QQSPAAAA 657
A P PA PAE PA P + PA P PAE PA PAE PA P + PA
Sbjct: 1369 LAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPK 1428
Query: 658 PAESAPAQAQPAAAPSPAAEAPATGSASPAE 688
PAE PA+ + +A P PA P + PAE
Sbjct: 1429 PAEPKPAEPK-SAEPKPAE--PKSAEPKPAE 1456
>M.Javanica_Scaff289g004454 on XP_813237 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1496
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 601 AAPSPAAAAPAESPPAAASP-QQSPAAPAPAESAPAAAAPAENAPAAASP-QQSPAAAAP 658
A P PA PAE PA P + PA P PAE PA PAE PA P + PA P
Sbjct: 948 AEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKP 1007
Query: 659 AESAPAQAQPAAAPSPAAEAPA 680
AE PA+ +P A P PA PA
Sbjct: 1008 AEPKPAEPKP-AEPKPAEPKPA 1028
>M.Javanica_Scaff289g004454 on XP_820135 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1519
Score = 27.7 bits (60), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 103/215 (47%), Gaps = 19/215 (8%)
Query: 466 AAPVPAAAQSA-SAPAEQKPAETAPAAAQNAPAPAAETPAAAAPSSGASAPAESAAPAQG 524
A P PA +SA S PAEQK AE+ PA ++A + AE P +A P AES Q
Sbjct: 1056 AEPKPAEQKSAESKPAEQKSAESKPAEQKSAESKPAE-PKSAEPKPAEQKSAESKPAEQK 1114
Query: 525 AAPTEQKPAE---TAPAPAEAAPAKSAAPAEAAPAAAASPAATGGGYSGAAAEATAPASA 581
+A E KPAE P PAE PA PAE PA PA A + T P SA
Sbjct: 1115 SA--ESKPAEPKSAEPKPAEPKPA-EPKPAEPKPAGP-KPAEQ----KSAEPKPTEPKSA 1166
Query: 582 AAAPSPAAGEATAPSANAAAAPSPAAAAPAESPPAAASPQQ-SPAAPAPAESAPAAAAPA 640
P+ + P+ A P PA PAE PA P + PA P PAE A + PA
Sbjct: 1167 GPKPAEQKSAESKPAEPKPAEPKPAGPKPAEPKPAEPKPAEPKPAGPKPAEQKSAESKPA 1226
Query: 641 ENAPAAASPQQSPAAAAPAESAPAQAQPAAAPSPA 675
E P +A P+ PA AE PA+ + +A P PA
Sbjct: 1227 E--PKSAEPK--PAEQKSAEPKPAEPK-SAEPKPA 1256
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff633g008378
(76 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001608665 variant erythrocyte surface antigen-1, alpha subun... 23 1.8
XP_818092 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.6
XP_001349514 PfEMP1 (Establishment) [Plasmodium falciparum] 22 4.7
XP_001351319 PfEMP1 (Establishment) [Plasmodium falciparum] 22 5.5
XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum] 22 6.0
XP_001609034 variant erythrocyte surface antigen-1, alpha subun... 22 8.6
>M.Javanica_Scaff633g008378 on XP_001608665 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1326
Score = 23.5 bits (49), Expect = 1.8, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 3 HAQMLQQTCFTPVTGIQHYNNSAASTTSNTISNNLQSSSSMAHF 46
H Q + Q C + GIQ +S T +T + S S +HF
Sbjct: 558 HFQAVTQYCPLVLIGIQGGIHSTTKGTDSTKEPAIHSLYSNSHF 601
>M.Javanica_Scaff633g008378 on XP_818092 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 884
Score = 23.1 bits (48), Expect = 2.6, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 24 SAASTTSNTISNNLQSSSSMAHFQENLNNSSP 55
S+A++T+ T+S++ ++ L N SP
Sbjct: 774 SSAASTATTVSSDFAQEAATGSGDTMLGNGSP 805
>M.Javanica_Scaff633g008378 on XP_001349514 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2120
Score = 22.3 bits (46), Expect = 4.7, Method: Composition-based stats.
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 22 NNSAASTTSNTISNNLQS 39
NN+ AS T N I N++ S
Sbjct: 1776 NNTTASDTQNDIQNDIPS 1793
>M.Javanica_Scaff633g008378 on XP_001351319 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2646
Score = 21.9 bits (45), Expect = 5.5, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 6/53 (11%)
Query: 20 HYNNSAASTTSNTISNNLQSSSSMAHFQENLNNSSPFGLHNYYSPHQQQQQAS 72
H+N + TTS T S+ L MA E + ++ +Y+ H+ + S
Sbjct: 143 HHNLESIETTSKTASDTLLLEVCMAAKYEGQS------INTHYTKHEHSNKDS 189
>M.Javanica_Scaff633g008378 on XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum]
Length = 3130
Score = 21.9 bits (45), Expect = 6.0, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 9 QTCFTPVTGIQHYNNSAASTTSNTISNNLQSSSSMA 44
+T T +G H N+S ++T NT N S +++
Sbjct: 3029 ETESTKRSGTDHTNSSESTTDDNTNDRNFSRSKNLS 3064
>M.Javanica_Scaff633g008378 on XP_001609034 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1313
Score = 21.6 bits (44), Expect = 8.6, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 16 TGIQHYNNSAASTTSNTISN 35
TG+Q N++A STT +N
Sbjct: 439 TGLQKRNSTALSTTPTATNN 458
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff357g005289
(93 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351877 PfEMP1 (Establishment) [Plasmodium falciparum] 26 0.32
XP_001349030 PfEMP1 (Establishment) [Plasmodium falciparum] 25 0.68
XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum] 25 0.97
XP_821088 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.0
XP_812697 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.0
XP_001609041 variant erythrocyte surface antigen-1, alpha subun... 25 1.1
XP_818295 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.3
XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum] 24 1.3
XP_810391 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.8
XP_818399 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.6
XP_821148 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.6
XP_001609533 variant erythrocyte surface antigen-1, alpha subun... 23 3.8
XP_817612 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.4
P13399 TA4 (Others) [Eimeria tenella] 23 4.8
CAE52292 SAG1 (Others) [Eimeria tenella] 23 4.8
XP_954175 TashAT3 (Establishment) [Theileria annulata] 23 5.1
XP_819530 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 6.4
XP_802978 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 8.2
>M.Javanica_Scaff357g005289 on XP_001351877 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2270
Score = 26.2 bits (56), Expect = 0.32, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 32/86 (37%), Gaps = 18/86 (20%)
Query: 16 GVSTQTCEPPTTPP---ICTCTWETSPG---------VTSTVQMTTAGTTSTVSP----- 58
G QTCE P TPP E +P T Q T GT V+P
Sbjct: 1677 GKPGQTCENPITPPDDEDLVLEEEQNPENMRPGFCPPQTPAQQEETDGTCDAVAPGAAKK 1736
Query: 59 ANGYPSVPPETEAPASTAGPIEPEKQ 84
A +PP E P + GP + + +
Sbjct: 1737 AEEESGIPPAAE-PEADKGPEQADTE 1761
>M.Javanica_Scaff357g005289 on XP_001349030 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 25.4 bits (54), Expect = 0.68, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Query: 55 TVSPANGYPSVPPETEAPASTAGPIEPEKQPI 86
TV P P P ET PA+ G PE+ P+
Sbjct: 1661 TVVPTE--PEEPGETCTPAAAGGGHNPEQTPV 1690
>M.Javanica_Scaff357g005289 on XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2264
Score = 24.6 bits (52), Expect = 0.97, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 20/53 (37%), Gaps = 6/53 (11%)
Query: 32 TCTWETSPGVTSTVQMTTAGTTSTVSPANGYPSVPPETEAPASTAGPIEPEKQ 84
TCT E T+ T T ST P + P +T GP EP +
Sbjct: 1699 TCTSE------DTITKETVETDSTDGPKQEEERIAPSAGDDGATRGPQEPSPK 1745
>M.Javanica_Scaff357g005289 on XP_821088 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 910
Score = 24.6 bits (52), Expect = 1.0, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 17 VSTQTCEPPTTPPICTCTWETSPGVTSTVQMTTAG 51
VS+ + PP+ P I T +P + Q+T G
Sbjct: 752 VSSDSIVPPSPPVIATAQQTGTPSTPAGTQLTEQG 786
>M.Javanica_Scaff357g005289 on XP_812697 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 911
Score = 24.6 bits (52), Expect = 1.0, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 17 VSTQTCEPPTTPPICTCTWETSPGVTSTVQMTTAG 51
VS+ + PP+ P I T +P + Q+T G
Sbjct: 753 VSSDSIVPPSPPVIATAQQTGTPSTPAGTQLTEQG 787
>M.Javanica_Scaff357g005289 on XP_001609041 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1318
Score = 24.6 bits (52), Expect = 1.1, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 18 STQTCEPPTTPPIC-TCTWETSPGVTSTVQ 46
ST+ +PP TP C TC T+ GV S +Q
Sbjct: 846 STKCGKPP-TPSFCQTCLQPTTTGVPSPLQ 874
>M.Javanica_Scaff357g005289 on XP_818295 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 922
Score = 24.3 bits (51), Expect = 1.3, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 30/76 (39%), Gaps = 19/76 (25%)
Query: 21 TCEPPTTPPI--CTCTWETSPGVTSTVQMTT-----------------AGTTSTVSPANG 61
T PP P+ T T+++ VT++V T A + + P++G
Sbjct: 690 TIPPPEREPVPALTTTFQSVDTVTTSVATETQATVAAPTPAAPQLTEQANSNGSSDPSDG 749
Query: 62 YPSVPPETEAPASTAG 77
PS P + TAG
Sbjct: 750 APSTPAVSNTTTPTAG 765
>M.Javanica_Scaff357g005289 on XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2858
Score = 24.3 bits (51), Expect = 1.3, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 63 PSVPPETEAPASTAGPIEP 81
PSVP ETE P++P
Sbjct: 2393 PSVPAETEKEKKKDSPLKP 2411
>M.Javanica_Scaff357g005289 on XP_810391 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 885
Score = 23.9 bits (50), Expect = 1.8, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Query: 15 IGVSTQTCEPPTTPPICTCTWETSPGVTSTVQMTTAGTTSTV-SPANGYPSVPPETEAPA 73
+ S T PP P+ TS V S + T T TV SPA P +T A
Sbjct: 683 LNASKVTIPPPERKPVPAAA-ATSSSVESANERVTTNTQPTVPSPATAGPQQTDQTTLNA 741
Query: 74 ST 75
S+
Sbjct: 742 SS 743
>M.Javanica_Scaff357g005289 on XP_818399 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 953
Score = 23.5 bits (49), Expect = 2.6, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 20/51 (39%), Gaps = 4/51 (7%)
Query: 40 GVTSTVQMTTAGTTSTVS----PANGYPSVPPETEAPASTAGPIEPEKQPI 86
G+T+ + T TV P PE E P+ G + EK P+
Sbjct: 736 GLTTKPSIPKTRGTKTVDGDTPPPEAIKQATPEAETPSGPGGQQQTEKDPL 786
>M.Javanica_Scaff357g005289 on XP_821148 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 924
Score = 23.1 bits (48), Expect = 3.6, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Query: 16 GVSTQTCEPPTTPPICTCTWE-TSPGVTSTVQMTTAGTTSTV--SPANG 61
G + Q PP TP T T + +P T+ Q+ A TT S ANG
Sbjct: 814 GDAVQGDTPPKTPVDTTATADANAPTATNVAQVGPADTTEVAASSGANG 862
>M.Javanica_Scaff357g005289 on XP_001609533 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1162
Score = 23.1 bits (48), Expect = 3.8, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 19 TQTCEPPTTPPIC-TCTWETSPGVTSTVQ 46
+ C TP IC TC T+ GV S +Q
Sbjct: 818 STKCGQKPTPSICKTCLQPTTTGVPSPLQ 846
>M.Javanica_Scaff357g005289 on XP_817612 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 922
Score = 22.7 bits (47), Expect = 4.4, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Query: 44 TVQMTTAGTTSTVSPANGYPSVPPETEAPASTAG 77
T Q+T+ G++ P++G PS P + TAG
Sbjct: 736 TEQVTSNGSSD---PSDGAPSTPAVSNTTTPTAG 766
>M.Javanica_Scaff357g005289 on P13399 TA4 (Others) [Eimeria tenella]
Length = 253
Score = 22.7 bits (47), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 25/76 (32%), Gaps = 22/76 (28%)
Query: 17 VSTQTCEPPTTPPICTCTWETSPGVTSTVQMTTAGTTSTV----SPANGYPSVPPETEAP 72
VS P T P+ +C P + AGTT V +PA
Sbjct: 153 VSFVALYNPKTSPVVSCVLLQCPNAGVGGRRLAAGTTDAVICLTNPA------------- 199
Query: 73 ASTAGPIEPEKQPIDD 88
P+E QP DD
Sbjct: 200 -----PLEARSQPFDD 210
>M.Javanica_Scaff357g005289 on CAE52292 SAG1 (Others) [Eimeria tenella]
Length = 253
Score = 22.7 bits (47), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 25/76 (32%), Gaps = 22/76 (28%)
Query: 17 VSTQTCEPPTTPPICTCTWETSPGVTSTVQMTTAGTTSTV----SPANGYPSVPPETEAP 72
VS P T P+ +C P + AGTT V +PA
Sbjct: 153 VSFVALYNPKTSPVVSCVLLQCPNAGVGGRRLAAGTTDAVICLTNPA------------- 199
Query: 73 ASTAGPIEPEKQPIDD 88
P+E QP DD
Sbjct: 200 -----PLEARSQPFDD 210
>M.Javanica_Scaff357g005289 on XP_954175 TashAT3 (Establishment) [Theileria annulata]
Length = 994
Score = 22.7 bits (47), Expect = 5.1, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 52 TTSTVSPANGYPSVPPETEAPASTAGPIEPEKQPIDDPLI 91
T + VS G P P + P+ G P +Q DD ++
Sbjct: 532 TDAGVSSGAGAPPPPGDGSEPSDGPGDCPPPEQDQDDTVL 571
Score = 22.7 bits (47), Expect = 5.5, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 64 SVPPETEAPASTAGPIEPEKQPID 87
S+ +++AP S A P EPE +D
Sbjct: 871 SIKHKSKAPESVAEPTEPETITLD 894
>M.Javanica_Scaff357g005289 on XP_819530 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 904
Score = 22.3 bits (46), Expect = 6.4, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 13/32 (40%)
Query: 50 AGTTSTVSPANGYPSVPPETEAPASTAGPIEP 81
A STVS A+ P PP T P P
Sbjct: 740 AAKPSTVSSASIIPPAPPVTPNGQKAGNPSTP 771
>M.Javanica_Scaff357g005289 on XP_802978 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 340
Score = 21.9 bits (45), Expect = 8.2, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 17/39 (43%)
Query: 50 AGTTSTVSPANGYPSVPPETEAPASTAGPIEPEKQPIDD 88
A T+ V PAN + + APA T +P Q D
Sbjct: 196 AATSPPVEPANDTVTTNAQATAPAPTPAGPQPTDQATLD 234
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff364g005369
(549 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351221 CTRP (Adhesin) [Plasmodium falciparum] 30 0.50
XP_817721 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.68
XP_001352170 MSP1 (Invasion) [Plasmodium falciparum] 27 2.6
XP_001609751 variant erythrocyte surface antigen-1, alpha subun... 27 3.4
XP_818396 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 3.5
XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum] 27 4.8
>M.Javanica_Scaff364g005369 on XP_001351221 CTRP (Adhesin) [Plasmodium falciparum]
Length = 2112
Score = 29.6 bits (65), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 57 ATTTPGNAPTTSTAAASTSTAASLATGSSGVTSSASSGSQA------PANVTISSATQST 110
+ +TPG+ ++ + S ST S + + G S ++ GS + P+ T S ++ST
Sbjct: 767 SESTPGSPSESTPGSPSESTPGSPSESTPGNPSESTPGSPSESTPGNPSESTPGSPSEST 826
Query: 111 -NSVATSSSTSGSCPC 125
S + S+ SG+C C
Sbjct: 827 PGSPSESTPCSGTCLC 842
>M.Javanica_Scaff364g005369 on XP_817721 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 922
Score = 29.3 bits (64), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 16/86 (18%)
Query: 58 TTTPGNAPTTSTAAA---STSTAASLATGSSGVTSSASSGSQ------------APANVT 102
TT NAPT T + +T A +++G SG T G + AP++ +
Sbjct: 829 TTADANAPTAETVGQFDPAVTTGAHVSSGESGETVGGRDGQEDAHSRVREVNATAPSS-S 887
Query: 103 ISSATQSTNSVATSSSTSGSCPCLLV 128
+ + +Q NS A + SG P LL+
Sbjct: 888 LGNVSQGNNSDAGTMRGSGMVPLLLL 913
>M.Javanica_Scaff364g005369 on XP_001352170 MSP1 (Invasion) [Plasmodium falciparum]
Length = 1720
Score = 27.3 bits (59), Expect = 2.6, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 59 TTPGNAPTTSTAAASTSTAASLATGSSGVTS----SASSGSQAPANVTISSATQSTNSVA 114
TT G + + +A S ++A S A+ SG ++ SA SG+ P+ + +S + +N++
Sbjct: 59 TTKGASAQSGASAQSGASAQSGASAQSGASAQSGASAQSGTSGPSGPSGTSPSSRSNTLP 118
Query: 115 TSSSTSGSCP 124
S+++SG+ P
Sbjct: 119 RSNTSSGASP 128
>M.Javanica_Scaff364g005369 on XP_001609751 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1298
Score = 26.9 bits (58), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 14/76 (18%)
Query: 300 LKAKISLVGIVLTVEEYLALCDTYTTISSIGDSML--SGDADSNPLLQSLNNSINSNATA 357
L+ ++ +G + EE D ++G +++ GD D+ S S+ATA
Sbjct: 1001 LRDEVKKIGWIPKKEE-----DGGKYRGTVGQALINIKGDKDTGA-------SAYSDATA 1048
Query: 358 QNYNSSTIAEANNYVS 373
N ST+ + N+YVS
Sbjct: 1049 TTNNLSTLTDGNHYVS 1064
>M.Javanica_Scaff364g005369 on XP_818396 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1044
Score = 26.9 bits (58), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 9/89 (10%)
Query: 36 ESDSSSQARRECNCGPLVDCYATTTPGNAPTTSTAAASTSTAASLATGSS----GVTSSA 91
+SDSS A + G AT + S+ AA T +A ATGSS G +S A
Sbjct: 839 DSDSSGAADTDSAKGK-----ATGGSAGEDSDSSGAADTDSAKGKATGSSAGEDGESSGA 893
Query: 92 SSGSQAPANVTISSATQSTNSVATSSSTS 120
+ A T SA + ++S + + S
Sbjct: 894 ADTDSAKGKATGGSAGEDSDSSGAADTDS 922
>M.Javanica_Scaff364g005369 on XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3954
Score = 26.6 bits (57), Expect = 4.8, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 19/36 (52%)
Query: 25 CPAPLPDIESSESDSSSQARRECNCGPLVDCYATTT 60
CP+ +P+ ++SD ++E CG + T+T
Sbjct: 2405 CPSDMPEKPKTDSDILCDDKKEPKCGNFRTLFKTST 2440
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff25133g090431
(109 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_828103 VSG (Establishment) [Trypanosoma brucei] 24 2.5
AAZ73239 ROP16 (Establishment) [Toxoplasma gondii] 22 7.8
>M.Javanica_Scaff25133g090431 on XP_828103 VSG (Establishment) [Trypanosoma brucei]
Length = 472
Score = 23.9 bits (50), Expect = 2.5, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 5 QIITISSLTFPFFPSSLPSIQSAFVPDYKILFENFPN 41
Q++ S L P P ++QSAF + +++FP+
Sbjct: 304 QVLGDSKLERPDAPVEANAVQSAFGSKMETEYKDFPD 340
>M.Javanica_Scaff25133g090431 on AAZ73239 ROP16 (Establishment) [Toxoplasma gondii]
Length = 255
Score = 22.3 bits (46), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 6/34 (17%)
Query: 75 CQKVIECAESKSELRICLFQTPDPNSTKSNPGQK 108
QK E A+ + + P P+ST SNPG K
Sbjct: 31 AQKASEAAKRQ------IATLPSPDSTLSNPGSK 58
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff777g009799
(79 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff29320g096198
(202 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351515 PfEMP1 (Establishment) [Plasmodium falciparum] 24 6.2
XP_001351514 PfEMP1 (Establishment) [Plasmodium falciparum] 24 6.2
>M.Javanica_Scaff29320g096198 on XP_001351515 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2181
Score = 24.3 bits (51), Expect = 6.2, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 20 DMHSGEAMVPTLSRVSSVPNLHNMHVSDAFRPGTLYKYRRDW 61
D SG+ + T S S P L+N +SD T ++Y +W
Sbjct: 1141 DDQSGDKLQST-SAPSDTPTLNNPKLSDFVLRPTYFRYLEEW 1181
>M.Javanica_Scaff29320g096198 on XP_001351514 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2201
Score = 24.3 bits (51), Expect = 6.2, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 20 DMHSGEAMVPTLSRVSSVPNLHNMHVSDAFRPGTLYKYRRDW 61
D SG+ + T S S P L+N +SD T ++Y +W
Sbjct: 1161 DDQSGDKLQST-SAPSDTPTLNNPKLSDFVLRPTYFRYLEEW 1201
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff30452g097533
(81 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_808495 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.0
XP_804506 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.3
>M.Javanica_Scaff30452g097533 on XP_808495 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 753
Score = 23.5 bits (49), Expect = 2.0, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 25 LESVFVGVLTDGVWNSPGICL 45
L +V G +DG WN +CL
Sbjct: 495 LVAVLSGAASDGRWNDEYLCL 515
>M.Javanica_Scaff30452g097533 on XP_804506 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1012
Score = 22.7 bits (47), Expect = 3.3, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 25 LESVFVGVLTDGVWNSPGICL 45
L +V G +DG WN +CL
Sbjct: 754 LVAVLSGAASDGRWNDEYLCL 774
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff617g008219
(62 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_821388 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.34
XP_819530 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.37
XP_820757 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.4
XP_817816 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.3
XP_812152 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 2.6
XP_821909 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 2.7
XP_812988 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 3.0
XP_818353 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 3.3
XP_812697 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 3.8
XP_820147 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.5
XP_808217 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.0
XP_820741 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.7
XP_802394 Trans-sialidase (Invasion) [Trypanosoma cruzi] 21 7.0
>M.Javanica_Scaff617g008219 on XP_821388 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 907
Score = 25.0 bits (53), Expect = 0.34, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 22 GGGSKDKGKKLVST-SGVEQGHEEQVNGPLG 51
GGGS G+ + T G G EE+VN LG
Sbjct: 830 GGGSTADGEPTMETREGGTNGQEEEVNTQLG 860
>M.Javanica_Scaff617g008219 on XP_819530 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 904
Score = 24.6 bits (52), Expect = 0.37, Method: Composition-based stats.
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Query: 22 GGGSKDKGKKLVST-SGVEQGHEEQVN 47
GGGS G+ + T G GHEE+VN
Sbjct: 827 GGGSTADGEPTMETREGGTNGHEEEVN 853
>M.Javanica_Scaff617g008219 on XP_820757 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 912
Score = 23.1 bits (48), Expect = 1.4, Method: Composition-based stats.
Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Query: 22 GGGSKDKGKKLVST-SGVEQGHEEQVN 47
GGGS G V T G G EE+VN
Sbjct: 836 GGGSTADGDPTVETREGGTNGQEEEVN 862
>M.Javanica_Scaff617g008219 on XP_817816 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 912
Score = 22.7 bits (47), Expect = 2.3, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Query: 22 GGGSKDKGKKLVST-SGVEQGHEEQVN 47
GGGS G+ + T G G EE+VN
Sbjct: 836 GGGSTADGEPTMETREGGTNGQEEEVN 862
>M.Javanica_Scaff617g008219 on XP_812152 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 923
Score = 22.3 bits (46), Expect = 2.6, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Query: 22 GGGSKDKGKKLVST-SGVEQGHEEQVN 47
GGGS G+ + T G G EE+VN
Sbjct: 846 GGGSTADGEPTMETRKGGTNGQEEEVN 872
>M.Javanica_Scaff617g008219 on XP_821909 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 954
Score = 22.3 bits (46), Expect = 2.7, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 22 GGGSKDKGKKLVSTSGVEQGHEEQV 46
GGG+ + K V+TS V EQ+
Sbjct: 789 GGGASNSAKTTVTTSSVGSQSAEQL 813
>M.Javanica_Scaff617g008219 on XP_812988 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 889
Score = 22.3 bits (46), Expect = 3.0, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Query: 22 GGGSKDKGKKLVST-SGVEQGHEEQVN 47
GGGS G+ + T G G EE+VN
Sbjct: 813 GGGSTADGEPTMETIEGGTNGQEEEVN 839
>M.Javanica_Scaff617g008219 on XP_818353 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 903
Score = 21.9 bits (45), Expect = 3.3, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Query: 22 GGGSKDKGKKLVST-SGVEQGHEEQVN 47
GGGS G+ + T G G EE+VN
Sbjct: 826 GGGSTADGEPTMETREGGTNGQEEEVN 852
>M.Javanica_Scaff617g008219 on XP_812697 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 911
Score = 21.9 bits (45), Expect = 3.8, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 22 GGGSKDKGKKLVSTSGVEQGHEEQVN 47
GGGS G+ + T G EEQ++
Sbjct: 835 GGGSTAVGEPTMETREGTNGQEEQIH 860
>M.Javanica_Scaff617g008219 on XP_820147 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 878
Score = 21.6 bits (44), Expect = 4.5, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 23 GGSKDKGKKLVSTSGVEQGHEEQVNGPLG 51
GGS G V T G G EE+++ G
Sbjct: 805 GGSFSDGDPTVETRGGTYGQEEEIHAQNG 833
>M.Javanica_Scaff617g008219 on XP_808217 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 880
Score = 21.6 bits (44), Expect = 5.0, Method: Composition-based stats.
Identities = 9/14 (64%), Positives = 11/14 (78%)
Query: 19 LLEGGGSKDKGKKL 32
LLEGG SKD K++
Sbjct: 145 LLEGGTSKDPNKRV 158
>M.Javanica_Scaff617g008219 on XP_820741 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 894
Score = 21.6 bits (44), Expect = 5.7, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 22 GGGSKDKGKKLVST-SGVEQGHEEQVNGPLG 51
GGG G+ + T G G EE+VN +G
Sbjct: 818 GGGFTADGEPTMETREGGTNGQEEEVNKQVG 848
>M.Javanica_Scaff617g008219 on XP_802394 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 174
Score = 21.2 bits (43), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 26 KDKGKKLVSTSGVEQGHEEQVNGP 49
K +++ +SG +G E ++ GP
Sbjct: 13 KHNRRRVTGSSGRREGRESELQGP 36
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff770g009734
(1922 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAK19757 MIC8 (Invasion) [Toxoplasma gondii] 34 0.044
XP_001609565 variant erythrocyte surface antigen-1, alpha subun... 30 1.2
XP_820186 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 3.4
XP_818889 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 6.7
>M.Javanica_Scaff770g009734 on AAK19757 MIC8 (Invasion) [Toxoplasma gondii]
Length = 255
Score = 34.3 bits (77), Expect = 0.044, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 48/118 (40%), Gaps = 11/118 (9%)
Query: 1739 FNCSKNLNHYCGQQAFCSDK-SVCQCLPGFSGFPPLFPCNAEISLNAPSNSLRNLECF-- 1795
F CSK Y ++C D ++C + CN + N N C
Sbjct: 89 FCCSKTACFYGSCGSWCHDNWALCSSSIIYHDEYSYGKCNCK---RFQENCDVNAICVHA 145
Query: 1796 NNTEGRCVSRCENGYFLNSDGSCEDVDECKMGVAVCGKEAFCRNLEGAYRCECPKNLK 1853
N +G +C+ GY+ DG +D C++ CG R EG Y+C+CP+ K
Sbjct: 146 NREDGGAYCQCKEGYW--GDGKSCKIDFCQL--QPCGAGTCTRTDEG-YKCDCPETHK 198
>M.Javanica_Scaff770g009734 on XP_001609565 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1341
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Query: 328 TEATSILNLETNAASNSILYTEAYTEATSLTTSASNTESTSIKNSETSSILNVEASTKTS 387
T ++ L N+ S IL A+ L S E KN +++I VE K
Sbjct: 754 TAKAKLVELTMNSGSGGIL--GDVVGASGLGMVTSKGEYDPGKNKISAAIHKVEEVLKLC 811
Query: 388 REATSSSKIKTTLETAE 404
+E T K+K +LE +
Sbjct: 812 KEWTEKEKVKESLECLQ 828
>M.Javanica_Scaff770g009734 on XP_820186 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1133
Score = 28.9 bits (63), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%)
Query: 771 AEAKAKFPFESEAKTKFPFEVEAETKFPFEAEAKTKFPLEAEAETKFPSKAEAKMKSSKS 830
AE K+ P +E K+ P E ++ P AE K+ P AE ++ P AE K K
Sbjct: 755 AEPKSAGPKPAEPKSAGPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKP 814
Query: 831 KVSTKSLIKPSKSEAESPSKTDS 853
S + KP++ ++ P +S
Sbjct: 815 AESKSAEPKPAEPKSAEPKPAES 837
Score = 27.7 bits (60), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%)
Query: 771 AEAKAKFPFESEAKTKFPFEVEAETKFPFEAEAKTKFPLEAEAETKFPSKAEAKMKSSKS 830
AE+K+ P +E K+ P E+++ P AE K+ P AE ++ P AE K K
Sbjct: 815 AESKSAEPKPAEPKSAEPKPAESKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKP 874
Query: 831 KVSTKSLIKPSKSEAESP 848
+ KP++S++ P
Sbjct: 875 AEPKSAEPKPAESKSAGP 892
Score = 27.3 bits (59), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%)
Query: 771 AEAKAKFPFESEAKTKFPFEVEAETKFPFEAEAKTKFPLEAEAETKFPSKAEAKMKSSKS 830
AE K+ P +E K+ P E ++ P AE K+ P AE ++ P AE+K K
Sbjct: 765 AEPKSAGPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAESKSAEPKP 824
Query: 831 KVSTKSLIKPSKSEAESP 848
+ KP++S++ P
Sbjct: 825 AEPKSAEPKPAESKSAEP 842
>M.Javanica_Scaff770g009734 on XP_818889 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 750
Score = 28.1 bits (61), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Query: 1544 GTISATESSEANFASSSGFIYKATESSSASNVSASRFKINSEATTKIHPKTTLRTPRRFT 1603
G +S E EA+ +SS +YK+TES + + ++ T H ++R +
Sbjct: 332 GPVSGKE--EADVTASS-LLYKSTESKDRKDELIALYEKKGNGETPSHDMVSVRLTAQLE 388
Query: 1604 KLQNCLQNWTRTTQ 1617
K++ L W + +
Sbjct: 389 KVKEVLATWKKVDE 402
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5661g040466
(50 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6854g045746
(243 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4802g036389
(278 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_803401 VSG (Establishment) [Trypanosoma brucei] 25 6.5
XP_829789 VSG (Establishment) [Trypanosoma brucei] 25 7.2
>M.Javanica_Scaff4802g036389 on XP_803401 VSG (Establishment) [Trypanosoma brucei]
Length = 493
Score = 24.6 bits (52), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Query: 49 TRDFGNVRYVATTNLRS---ECSVDACAKASNIIEVEDGGHVKNVIIGDGAKGILCKGGC 105
T D GN+ +A TN+R+ + + D A +I +E G+ N GG
Sbjct: 42 TADAGNLAGIALTNIRAPALQVAADIKALLRTLIYIE--GNSTNAATKAQRTATAFLGGQ 99
Query: 106 TLENVFFEKTCYHAVDLGNSMDA 128
T EN+ + + A D+ + +A
Sbjct: 100 TAENLEYYSSTSVATDVTTARNA 122
>M.Javanica_Scaff4802g036389 on XP_829789 VSG (Establishment) [Trypanosoma brucei]
Length = 526
Score = 24.6 bits (52), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 153 AGSTTITGFCAANFSKVWRSCGMECNQ 179
A ST TG AAN K+ +SC + Q
Sbjct: 253 AASTFATGVTAANLGKLAKSCPFDAGQ 279
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3583g029961
(51 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6830g045638
(151 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001610720 variant erythrocyte surface antigen-1, beta subuni... 25 1.7
XP_001349033 PfEMP1 (Establishment) [Plasmodium falciparum] 25 3.5
XP_001610568 variant erythrocyte surface antigen-1, alpha subun... 24 6.0
XP_844695 VSG (Establishment) [Trypanosoma brucei] 23 7.5
>M.Javanica_Scaff6830g045638 on XP_001610720 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1102
Score = 25.4 bits (54), Expect = 1.7, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 7/39 (17%)
Query: 86 DCSSSGLNECSKGMCECFTTFIDCMNQKKCTPLPTSVRR 124
DC+ SG+N CS G +C DC +C P T +
Sbjct: 164 DCNGSGVNCCSPGGKKCH----DC---TECGPKATEATK 195
>M.Javanica_Scaff6830g045638 on XP_001349033 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2064
Score = 24.6 bits (52), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Query: 88 SSSGLNECSKGM----CECFTTFIDCMNQKKCTPLPTSVRRVRNFGSF 131
++S NEC K M C+CF +I+ Q + + + FG F
Sbjct: 597 NNSASNECKKNMCFKNCQCFEKWIN-KKQDEWNKIKKHYNNEKGFGEF 643
>M.Javanica_Scaff6830g045638 on XP_001610568 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1329
Score = 23.9 bits (50), Expect = 6.0, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 22/50 (44%)
Query: 73 YKNLSNSCDVILSDCSSSGLNECSKGMCECFTTFIDCMNQKKCTPLPTSV 122
Y L N+ + +LS C+S + C K +C + +K P T V
Sbjct: 835 YTTLLNAINNLLSICNSPKCSACDKHSTKCGQKAESTICEKCLQPTTTGV 884
>M.Javanica_Scaff6830g045638 on XP_844695 VSG (Establishment) [Trypanosoma brucei]
Length = 476
Score = 23.5 bits (49), Expect = 7.5, Method: Composition-based stats.
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 85 SDCSSSGLNECSKGMCE 101
+DC + +EC G CE
Sbjct: 414 NDCKTKSKDECKSGKCE 430
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff29947g096940
(127 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_843643 VSG (Establishment) [Trypanosoma brucei] 26 0.58
XP_802902 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.6
XP_816886 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.2
XP_804105 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.2
XP_808402 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 6.0
AAY44839 MSA-1 (Invasion) [Babesia bovis] 23 8.3
XP_803499 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 9.4
>M.Javanica_Scaff29947g096940 on XP_843643 VSG (Establishment) [Trypanosoma brucei]
Length = 516
Score = 26.2 bits (56), Expect = 0.58, Method: Composition-based stats.
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 53 DGPDPDDVLDEAFTDGSG 70
+GPD DD++D FT +G
Sbjct: 179 NGPDNDDIVDSGFTKIAG 196
>M.Javanica_Scaff29947g096940 on XP_802902 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 719
Score = 25.0 bits (53), Expect = 1.6, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 20/85 (23%)
Query: 34 NRPAGGVKVKLWDEASIYDDGP---DPDD-----------------VLDEAFTDGSGSFS 73
N+ G + + L D+A +YD GP + DD V + +DGS S
Sbjct: 94 NKEKGRLHLWLTDKARVYDVGPISREADDAAASSLLMRSGNEKLISVYENKKSDGSYSLV 153
Query: 74 LRGSTRELTTIDPVLKIYHDCDDGI 98
++L I ++K + D D +
Sbjct: 154 AVSLGKQLERIKSMVKKWKDLDGAL 178
>M.Javanica_Scaff29947g096940 on XP_816886 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 905
Score = 24.6 bits (52), Expect = 2.2, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Query: 34 NRPAGGVKVKLWDEASIYDDGPDPDDVLDEAFTDGSGSFSLRGSTRELTTI 84
N+ G + + L D+A +YD GP + EA + S +R +L ++
Sbjct: 342 NKEKGRLHLWLTDKARVYDVGP----ISREADDAAASSLLMRSGNEKLISV 388
>M.Javanica_Scaff29947g096940 on XP_804105 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1017
Score = 24.6 bits (52), Expect = 2.2, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Query: 34 NRPAGGVKVKLWDEASIYDDGPDPDDVLDEAFTDGSGSFSLRGSTRELTTI 84
N+ G + + L D+A +YD GP + EA + S +R +L ++
Sbjct: 382 NKEKGRLHLWLTDKARVYDVGP----ISREADDAAASSLLMRSGNEKLISV 428
>M.Javanica_Scaff29947g096940 on XP_808402 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 846
Score = 23.5 bits (49), Expect = 6.0, Method: Composition-based stats.
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 30 LLCGNRPAGGVKVKLWDEASIY 51
LLCG+ P G + W+ + Y
Sbjct: 629 LLCGDGPKSGEHSRDWEPGTTY 650
>M.Javanica_Scaff29947g096940 on AAY44839 MSA-1 (Invasion) [Babesia bovis]
Length = 274
Score = 22.7 bits (47), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 18/34 (52%), Gaps = 6/34 (17%)
Query: 82 TTIDPVLKIYHDCD------DGIMPGQRKVKLRI 109
T +D V++IYH C+ D + P ++ + I
Sbjct: 123 TLMDSVIQIYHKCNALNNEVDRLFPNGQETEENI 156
>M.Javanica_Scaff29947g096940 on XP_803499 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 256
Score = 22.7 bits (47), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 3/48 (6%)
Query: 27 KGILLCGNRPA---GGVKVKLWDEASIYDDGPDPDDVLDEAFTDGSGS 71
+G+LL A G K LW+EA + P D T G GS
Sbjct: 201 RGLLLVKGTVANEGGNNKKLLWNEAHLVKPEPRGDSYSLTELTGGGGS 248
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7929g050009
(89 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_844697 VSG (Establishment) [Trypanosoma brucei] 25 0.45
XP_803373 VSG (Establishment) [Trypanosoma brucei] 25 0.83
XP_812771 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.5
XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum] 23 4.1
XP_001610196 variant erythrocyte surface antigen-1, alpha subun... 23 5.0
XP_818346 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 6.2
>M.Javanica_Scaff7929g050009 on XP_844697 VSG (Establishment) [Trypanosoma brucei]
Length = 342
Score = 25.4 bits (54), Expect = 0.45, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 33 VPSENK--NNQANVNSAFAMFRNFDKRAAVANGGGGSEFGIH 72
VPSE + N+ +N D R GGG E+G+H
Sbjct: 166 VPSETEFHENKVQFRMRIKKRKNSDGRQHFYTYGGGKEYGLH 207
>M.Javanica_Scaff7929g050009 on XP_803373 VSG (Establishment) [Trypanosoma brucei]
Length = 499
Score = 24.6 bits (52), Expect = 0.83, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 53 NFDKRAAVANGGGGSEFGIHN 73
NFD RA NGGG ++ N
Sbjct: 172 NFDTRANACNGGGNAKAASQN 192
>M.Javanica_Scaff7929g050009 on XP_812771 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 924
Score = 23.9 bits (50), Expect = 1.5, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Query: 16 ILYN--FDGSTIKFICKLD---VPSENKNNQANVNSAFAMFRNFDKRAAV-ANGGGG 66
+LYN DG+ ++ + + +PS NKN Q NV +F+ + K + NG GG
Sbjct: 703 LLYNRPLDGNEVEALKPNEASSLPSVNKNGQGNVIPSFSGEQQKQKGQPLWKNGAGG 759
>M.Javanica_Scaff7929g050009 on XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2994
Score = 22.7 bits (47), Expect = 4.1, Method: Composition-based stats.
Identities = 11/20 (55%), Positives = 12/20 (60%)
Query: 10 GFDCSPILYNFDGSTIKFIC 29
GFDCS I N +GS F C
Sbjct: 1512 GFDCSEIGPNENGSFAIFKC 1531
>M.Javanica_Scaff7929g050009 on XP_001610196 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1330
Score = 22.7 bits (47), Expect = 5.0, Method: Composition-based stats.
Identities = 8/14 (57%), Positives = 8/14 (57%)
Query: 9 PGFDCSPILYNFDG 22
PGF C ILY D
Sbjct: 888 PGFSCQEILYTEDA 901
>M.Javanica_Scaff7929g050009 on XP_818346 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 927
Score = 22.3 bits (46), Expect = 6.2, Method: Composition-based stats.
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 45 NSAFAMFRNFDKRAAVANGGGGSEFGI 71
N + + + + AAV GGG + G+
Sbjct: 174 NDIYMLVGKYSRTAAVKEGGGADDVGL 200
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4748g036131
(71 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAK94670 SUB1 (Protease) [Toxoplasma gondii] 22 3.7
>M.Javanica_Scaff4748g036131 on AAK94670 SUB1 (Protease) [Toxoplasma gondii]
Length = 255
Score = 22.3 bits (46), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 7/47 (14%)
Query: 7 VLLIILSTTS-------DNDDHLPTTSTSEHVEHLPPTTYLNFLPPV 46
L+++LST + D D L T+ S H E+ PT+ N + +
Sbjct: 12 ALIVLLSTNARGLRVRKDKDVLLATSFLSHHGEYQNPTSTYNLIKEI 58
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff372g005474
(133 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001611442 variant erythrocyte surface antigen-1, alpha subun... 28 0.24
XP_001609040 variant erythrocyte surface antigen-1, alpha subun... 26 0.86
XP_001612314 variant erythrocyte surface antigen-1, alpha subun... 25 1.2
XP_001610497 variant erythrocyte surface antigen-1, alpha subun... 25 1.3
XP_001610197 variant erythrocyte surface antigen-1, beta subuni... 24 4.9
XP_954179 TashAT2 (Establishment) [Theileria annulata] 23 5.4
XP_819490 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 6.9
XP_001611901 variant erythrocyte surface antigen-1, alpha subun... 23 7.1
XP_806299 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 9.4
>M.Javanica_Scaff372g005474 on XP_001611442 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1350
Score = 27.7 bits (60), Expect = 0.24, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 51 IIDRKKRHIGSGFGDGGGDGGGGCGCRESGLTCG-CGC 87
I D H+G G G GG C C T G C C
Sbjct: 213 IFDDNGHHLGRGCTRCKGSGGSDCSCESDCTTSGKCKC 250
>M.Javanica_Scaff372g005474 on XP_001609040 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1335
Score = 25.8 bits (55), Expect = 0.86, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 6/42 (14%)
Query: 50 LIIDRKKRHIGSGFGDGGGD------GGGGCGCRESGLTCGC 85
L + + H+G G GD GGGC C+ G GC
Sbjct: 165 LKVGAENHHLGRGCDKCDGDKCGKPGAGGGCQCQCKGGASGC 206
>M.Javanica_Scaff372g005474 on XP_001612314 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1308
Score = 25.4 bits (54), Expect = 1.2, Method: Composition-based stats.
Identities = 10/20 (50%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
Query: 64 GDGGGDGGGGCGCRESGLTC 83
G+ G +GGG CGC +S ++C
Sbjct: 1141 GEHGSNGGGQCGC-QSVVSC 1159
>M.Javanica_Scaff372g005474 on XP_001610497 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1315
Score = 25.4 bits (54), Expect = 1.3, Method: Composition-based stats.
Identities = 10/20 (50%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
Query: 64 GDGGGDGGGGCGCRESGLTC 83
G+ G +GGG CGC +S ++C
Sbjct: 1146 GEHGSNGGGQCGC-QSIVSC 1164
>M.Javanica_Scaff372g005474 on XP_001610197 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1123
Score = 23.9 bits (50), Expect = 4.9, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 12/27 (44%)
Query: 62 GFGDGGGDGGGGCGCRESGLTCGCGCC 88
G GG G G GC +G G CC
Sbjct: 153 GQTKGGKSDGIGKGCERTGSGVGGKCC 179
>M.Javanica_Scaff372g005474 on XP_954179 TashAT2 (Establishment) [Theileria annulata]
Length = 1161
Score = 23.5 bits (49), Expect = 5.4, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 5 INLILYIFICSLRSITKNVYGIEDPSNKIFRLEQ 38
I ++ I + S+ +I+ + DPS FR+ Q
Sbjct: 3 IYMVCMIILYSIENISSTTLDLNDPSRSKFRVIQ 36
>M.Javanica_Scaff372g005474 on XP_819490 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 997
Score = 23.1 bits (48), Expect = 6.9, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Query: 6 NLILYIFICSLRSITK---NVYGIEDPSNKIFRLEQLEPINNEDEQKLIIDRKKRHIGSG 62
N++LY I R I K + I +P + + ++ P + + + R + H+GS
Sbjct: 674 NVLLYNRIIYGREIAKLRASKVPIPNPGEESRSVPEIPPRPTGEFEATPVKRNEEHLGSH 733
Query: 63 FGDGGGD 69
G GD
Sbjct: 734 AALGNGD 740
>M.Javanica_Scaff372g005474 on XP_001611901 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1211
Score = 23.1 bits (48), Expect = 7.1, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 14/49 (28%)
Query: 53 DRKKRHIGSGFG--DGGG------DG------GGGCGCRESGLTCGCGC 87
D+ H+G G GGG DG G C C ++G C C C
Sbjct: 181 DKNGHHLGRGCTRCSGGGSDCTCKDGEDQCAVGTECKCAKAGKCCKCYC 229
>M.Javanica_Scaff372g005474 on XP_806299 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1047
Score = 22.7 bits (47), Expect = 9.4, Method: Composition-based stats.
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 92 SMKRPKPRNYWRRPY 106
SM+ PK N W PY
Sbjct: 274 SMRFPKSGNKWELPY 288
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff573g007744
(346 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_828102 VSG (Establishment) [Trypanosoma brucei] 27 2.4
AAN35478 MTRAP (Adhesin) [Plasmodium falciparum] 25 6.1
>M.Javanica_Scaff573g007744 on XP_828102 VSG (Establishment) [Trypanosoma brucei]
Length = 471
Score = 26.6 bits (57), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 60/156 (38%), Gaps = 14/156 (8%)
Query: 161 KYPKFIKNDVYITGESYAGIYLPMLTSLIVKGMSKFKINLKGLAIGNPYLNKKIDYESNL 220
K + +KN + E + +YL +I ++ LK L + K ++
Sbjct: 120 KQQQKLKNRGALQLEQHQKLYLSRKLRVIASKSAELASELKMLKVVEQADAAKNAAKNLK 179
Query: 221 IYAYGHG------VVDEELWQSVKKDCCKGCVEGCDIEKLTGICSNNVIQIYNSFSNGNI 274
I AYG +V E+++ KD + C E +K+T S +I + +N
Sbjct: 180 IAAYGADRTAAGPLVGAEVFKGAGKDTAQACCENTAADKVTETISGTIICVCAGGAN--- 236
Query: 275 NPYDIYRNCGNSPNASSYQKYDMFSRAAFRLKNMAK 310
+ C N P Q D + AA + +AK
Sbjct: 237 ----LKTVCVN-PQTELSQWSDGQTGAATQWTTLAK 267
>M.Javanica_Scaff573g007744 on AAN35478 MTRAP (Adhesin) [Plasmodium falciparum]
Length = 498
Score = 25.4 bits (54), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 14/89 (15%)
Query: 246 VEGCDIEKLTGICSNNVIQIYNSFSNGNINPYDIYRNCGNS--------PNASSYQKYDM 297
+EG +I K I N N + NI+ +D RN N PN S+Y YDM
Sbjct: 298 IEGDNITKEERIVPINNKNYDNHDEHSNIHEHDTSRNVDNEKYNSNDDLPNLSTYD-YDM 356
Query: 298 FSRAAFRLKNMAKLAKKAKLNIMEEDTRR 326
+ +++ +M KK +I EE T++
Sbjct: 357 -NNDSYKKNHM----KKPMDSIKEEQTKQ 380
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff395g005758
(174 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_820140 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.7
XP_821714 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.8
>M.Javanica_Scaff395g005758 on XP_820140 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 875
Score = 25.0 bits (53), Expect = 2.7, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Query: 21 KSQESIPQKFFGAFQYENSDNWEAYLAAKGYNEEM 55
K ES PQ+ FGA D+W + + G +M
Sbjct: 218 KDTESSPQRLFGA----QPDSWTKLIGSGGSGVKM 248
>M.Javanica_Scaff395g005758 on XP_821714 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 827
Score = 25.0 bits (53), Expect = 2.8, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Query: 21 KSQESIPQKFFGAFQYENSDNWEAYLAAKGYNEEMR 56
K ES PQ+ FGA D+W + + G +M+
Sbjct: 214 KDTESSPQRLFGA----QLDSWTRLIGSGGSGVKMK 245
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4165g033193
(57 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3527g029642
(146 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609041 variant erythrocyte surface antigen-1, alpha subun... 23 7.5
>M.Javanica_Scaff3527g029642 on XP_001609041 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1318
Score = 23.5 bits (49), Expect = 7.5, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 5/35 (14%)
Query: 96 LSGCRPSLREQFECLPCRRAQSGCRPFLRELSECR 130
L G SL E F+ + CR + C P ++CR
Sbjct: 1113 LQGGLESLSEAFQQIECRGCKGNCDP-----NKCR 1142
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7296g047508
(392 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff8228g051169
(564 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001352170 MSP1 (Invasion) [Plasmodium falciparum] 32 0.13
XP_001350954 RESA (Others) [Plasmodium falciparum] 28 1.2
XP_818346 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 6.0
>M.Javanica_Scaff8228g051169 on XP_001352170 MSP1 (Invasion) [Plasmodium falciparum]
Length = 1720
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 305 HLIERLRKLLKNANLKGVFPSENNKVVVE 333
HLI L++++KN N G PSENNK V E
Sbjct: 1202 HLITELKEVIKNKNYTGNSPSENNKKVNE 1230
>M.Javanica_Scaff8228g051169 on XP_001350954 RESA (Others) [Plasmodium falciparum]
Length = 654
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 53/124 (42%), Gaps = 8/124 (6%)
Query: 171 KLNETNLNTKSLDTTKRTINKEREQQINKTRTEKEKTQETTQTTTTFSTNKTTTINREEQ 230
K NE N N + + +K +K E++ N+T K E + +T + NK+T
Sbjct: 453 KTNEENKNKEKTNNSKSDGSKAHEKKENET---KNTAGENKKVDSTSADNKSTNAATPGA 509
Query: 231 KQINIKTTQLEKEKTEETTKTTTRATTITTFSLNKTPTKTTQTEKEKTEE--TTKTTTKA 288
K KT + +KT +T T K TK T KE T+E T+K TK
Sbjct: 510 KD---KTQGGKTDKTGASTNAATNKGQCAAEGATKGATKEASTSKEATKEASTSKEATKE 566
Query: 289 TTFS 292
+ S
Sbjct: 567 ASTS 570
>M.Javanica_Scaff8228g051169 on XP_818346 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 927
Score = 26.2 bits (56), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 9/55 (16%)
Query: 365 WENNEADDRLAI---RSWAR------EHSRQPDHQLVLPFQNNSDEGEELISTQK 410
W++N+ R+++ SW+R + D LV P + EGE+ +S K
Sbjct: 219 WKDNDDVSRISVGELESWSRLTGGGGSGIKMEDDTLVFPVEGTKKEGEKAVSLLK 273
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7798g049517
(87 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350582 PTRAMP (Adhesin) [Plasmodium falciparum] 26 0.30
XP_657460 Lgl5 (Adhesin) [Entamoeba histolytica] 22 9.2
>M.Javanica_Scaff7798g049517 on XP_001350582 PTRAMP (Adhesin) [Plasmodium falciparum]
Length = 352
Score = 25.8 bits (55), Expect = 0.30, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 10 SSSDLFMLSALSVEDFEEAIDEHGQGGN-QMIRIELQGVVGRIVVWDQDHSEFIAEDLME 68
SS+DL + ++E + + GN +M +E + + + + +++ EFI D E
Sbjct: 23 SSNDLCSCNLKVRNNWEHFLQVYQNNGNFKMEILEPECTIQKNLPSEEEKEEFIDFDRKE 82
Query: 69 EFIHNGITAFNHQLTLEK 86
+H+ + N Q T EK
Sbjct: 83 LLLHDFVVIKNSQFTDEK 100
>M.Javanica_Scaff7798g049517 on XP_657460 Lgl5 (Adhesin) [Entamoeba histolytica]
Length = 270
Score = 21.6 bits (44), Expect = 9.2, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 7/68 (10%)
Query: 14 LFMLSALSVEDFEEAIDEHGQGGNQMIRIELQGVVGRIVVWDQDHSEFIAEDLMEEFIHN 73
LF+L S+ D + G NQ+ G+ R +D D + + +++F +
Sbjct: 4 LFLLIVYSIADTSD-------GRNQLSEKYPYGMDNRNTKFDHDFTSDVNSYQIQKFAES 56
Query: 74 GITAFNHQ 81
G+ + N +
Sbjct: 57 GVFSANQE 64
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4694g035891
(165 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2861g025676
(77 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_809607 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.74
XP_001347833 Falcipain 3 (Cysteine protease) [Plasmodium falc... 21 9.8
>M.Javanica_Scaff2861g025676 on XP_809607 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 920
Score = 24.6 bits (52), Expect = 0.74, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 23/54 (42%)
Query: 20 LAVANQNFLVSDISTVVLPSWLLLWANAETRKHLFGKIIAAKNILTNGNTIQTN 73
AVA + D+S + S LL A+T + LF + +L G + N
Sbjct: 101 FAVAEAQWKKDDVSFTGVASQLLTTKTADTPEELFSDALKETQVLEEGASKDAN 154
>M.Javanica_Scaff2861g025676 on XP_001347833 Falcipain 3 (Cysteine protease) [Plasmodium
falciparum]
Length = 482
Score = 21.2 bits (43), Expect = 9.8, Method: Composition-based stats.
Identities = 6/25 (24%), Positives = 17/25 (68%)
Query: 11 SYDENQNFFLAVANQNFLVSDISTV 35
++ N+N+F+ V + FL++++ +
Sbjct: 136 NFIHNENYFINVFDHKFLMNNVEHI 160
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2811g025357
(533 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001348153 MAEBL (Adhesin) [Plasmodium falciparum] 28 1.9
XP_001611900 variant erythrocyte surface antigen-1, alpha subun... 26 6.2
XP_815267 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 6.3
XP_812082 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 8.1
>M.Javanica_Scaff2811g025357 on XP_001348153 MAEBL (Adhesin) [Plasmodium falciparum]
Length = 2054
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 11/97 (11%)
Query: 408 IENTIPAANPQYEALENWKIKQEKQQENWHPIEQGGVNKSEMYWPWRTKIGQQDVMAGDF 467
+ NT NPQ E ++ + I + W G K ++ +I ++DV++ +
Sbjct: 15 VNNTSAINNPQEEFMDRFDINKNHVNIKWSNSGIHGKGK------FKYEIEERDVLS-EG 67
Query: 468 NENKEEKQC----DGGIDPYWCKDYIKQFMLGIEGGK 500
NE+++ C G C DY K F++G E K
Sbjct: 68 NESEKSTICPNHVKEGTYKLGCPDYGKTFLMGFEDNK 104
>M.Javanica_Scaff2811g025357 on XP_001611900 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1226
Score = 26.2 bits (56), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 13/63 (20%), Positives = 30/63 (47%)
Query: 242 NYLQNYNNNPLNNYQNYPFSNQFDQNLRQQQLSYLNKDLIFNNCPPTFNEQSLHFPSSLY 301
N+ + ++N N ++ N + ++ +K ++FNN + E+++H +LY
Sbjct: 398 NFAVHGHDNHANTFRQPAGMNYAGYIHTMDKGAFCSKAIVFNNGTTSITEENIHKCGALY 457
Query: 302 PQY 304
Y
Sbjct: 458 KLY 460
>M.Javanica_Scaff2811g025357 on XP_815267 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 718
Score = 26.2 bits (56), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Query: 442 GGVNKSEMYWPWRTKIGQQDVM--AGDFNENKEEKQCDGGI---DPYWCKDYIKQFMLGI 496
G NKS+ YW W+ D++ G+ ++ + + I P K++ +M GI
Sbjct: 136 GSYNKSKNYWTWQPDGSDWDILLAVGEVTKSTADGKTTANITWGSPVSLKEFFPAYMEGI 195
>M.Javanica_Scaff2811g025357 on XP_812082 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 554
Score = 25.8 bits (55), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Query: 442 GGVNKSEMYWPWRTKIGQQDVM--AGDFNENKEEKQCDGGI---DPYWCKDYIKQFMLGI 496
G NKS+ YW W+ D++ G+ ++ + + I P K++ +M GI
Sbjct: 136 GSYNKSKNYWTWQPDGSDWDILLAVGEVTKSTADGKTTANITWGSPVSLKEFFPAYMEGI 195
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff348g005187
(924 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ABA06449 MSA-2a/b T-2 (Invasion) [Babesia bovis] 29 0.87
ABA06445 MSA-2a/b (Invasion) [Babesia bovis] 29 1.1
XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum] 27 5.1
XP_806338 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 5.2
>M.Javanica_Scaff348g005187 on ABA06449 MSA-2a/b T-2 (Invasion) [Babesia bovis]
Length = 274
Score = 29.3 bits (64), Expect = 0.87, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 445 PTTTTTEPSTTTTAEPTTTTTEPSTTTTAEPTTTTTEPSTT 485
P+ T + P TTT +P+ + P+T+ + +PS +
Sbjct: 205 PSPTHSSPQGTTTTQPSQDSAAPNTSAESSSGNLNGQPSKS 245
Score = 28.9 bits (63), Expect = 1.1, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 21/48 (43%)
Query: 438 PTTTTTLPTTTTTEPSTTTTAEPTTTTTEPSTTTTAEPTTTTTEPSTT 485
P+ T + P TTT + +A P T+ S +P+ + P T
Sbjct: 205 PSPTHSSPQGTTTTQPSQDSAAPNTSAESSSGNLNGQPSKSAETPKPT 252
Score = 28.5 bits (62), Expect = 1.6, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 424 PTTTTTLPT-TTTTLPTTTTTLPTTTTTEPSTTTTAEPTTTTTEPSTTTTA 473
P+ T + P TTTT P+ + P T+ S +P+ + P T ++
Sbjct: 205 PSPTHSSPQGTTTTQPSQDSAAPNTSAESSSGNLNGQPSKSAETPKPTGSS 255
>M.Javanica_Scaff348g005187 on ABA06445 MSA-2a/b (Invasion) [Babesia bovis]
Length = 274
Score = 28.9 bits (63), Expect = 1.1, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 445 PTTTTTEPSTTTTAEPTTTTTEPSTTTTAEPTTTTTEPS 483
P+ T + P TTT +P+ + P+T+ + +PS
Sbjct: 205 PSPTHSSPQGTTTTQPSQDSAAPNTSAESSSGNLNGQPS 243
Score = 28.1 bits (61), Expect = 2.3, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 20/48 (41%)
Query: 438 PTTTTTLPTTTTTEPSTTTTAEPTTTTTEPSTTTTAEPTTTTTEPSTT 485
P+ T + P TTT + +A P T+ S +P+ P T
Sbjct: 205 PSPTHSSPQGTTTTQPSQDSAAPNTSAESSSGNLNGQPSKPAETPKPT 252
Score = 27.7 bits (60), Expect = 3.1, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 424 PTTTTTLPT-TTTTLPTTTTTLPTTTTTEPSTTTTAEPTTTTTEPSTTTTA 473
P+ T + P TTTT P+ + P T+ S +P+ P T ++
Sbjct: 205 PSPTHSSPQGTTTTQPSQDSAAPNTSAESSSGNLNGQPSKPAETPKPTGSS 255
>M.Javanica_Scaff348g005187 on XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3119
Score = 27.3 bits (59), Expect = 5.1, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 424 PTTTTTLPTTTTTLPTTTTTLPTTTTTEPSTT 455
PT+ +PTT+ TTT + TTT PS +
Sbjct: 1896 PTSWKCVPTTSGGSGVTTTAGSSVTTTPPSNS 1927
>M.Javanica_Scaff348g005187 on XP_806338 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 652
Score = 27.3 bits (59), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 53/155 (34%), Gaps = 11/155 (7%)
Query: 437 LPTTTTTLPTTTTTEPSTTTTAEPTTTTTEPSTTTTAEPTTTTTEPSTTTT---FNCAQP 493
+P TT LP T T + P+ + AE +P T +T +
Sbjct: 103 VPQTTQVLPKTGTGSSRRDSFVSPSLVSAGGVIAAFAEGHIDAKKPHTESTNPSSDVVAE 162
Query: 494 PVTSLLSYNTSDPKIQTGSNATQGVCECPADPGNSNVFFIPVTTITTGSSASNSSVIMKC 553
+ S + T K++ V NS VFF TT T N ++
Sbjct: 163 YIDSAWEWPTLVEKVKKEEWRAHTVLGKAEGTDNSVVFFYHPTTTTK----DNKVFLLAG 218
Query: 554 SKMQDFCICDEDDVCWKVINAYSLVVINSFCDPTC 588
S + +E D WK N +V+ +PT
Sbjct: 219 S----LDLHNESDGKWKWDNFELKLVVGDVREPTS 249
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3176g027624
(616 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_812550 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.94
XP_821991 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 1.1
XP_813642 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 1.8
XP_821693 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 3.0
XP_804542 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 3.7
XP_819146 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 4.5
XP_821425 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 5.4
XP_807166 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 7.9
>M.Javanica_Scaff3176g027624 on XP_812550 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 795
Score = 28.9 bits (63), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 7/57 (12%)
Query: 175 LGELQYERRCKFAKLCSTSLPAPPKSVYAPTFSYAVNTQMQDPWEGVSNGTKFLVYI 231
L EL Y+ + K+ LCS KS +A Y V +Q NGT+ VY+
Sbjct: 612 LMELSYDSQNKWRVLCSDGTTKKLKSTWATETQYQVAIVLQ-------NGTQGSVYV 661
>M.Javanica_Scaff3176g027624 on XP_821991 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 882
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 8/80 (10%)
Query: 165 EMEKGNSNYYLGELQYERRCKFAKLCSTSLPAPPKSVYAPTFSYAVNTQMQDPWEGVSNG 224
++ GN+N L L Y + K+ LC S + P Y V +Q NG
Sbjct: 594 KINDGNNNPVLLGLSYNSQNKWQVLCIGGNTKDLSSTWEPQTQYQVAIVLQ-------NG 646
Query: 225 TKFLVYIFERNPEKGLPFSL 244
T+ VYI + E G+ F L
Sbjct: 647 TQGSVYIDGKRLE-GVLFDL 665
>M.Javanica_Scaff3176g027624 on XP_813642 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 872
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 7/63 (11%)
Query: 169 GNSNYYLGELQYERRCKFAKLCSTSLPAPPKSVYAPTFSYAVNTQMQDPWEGVSNGTKFL 228
G+ N L L Y+ K+ LC P P S + Y V ++ NGT+
Sbjct: 601 GDGNSVLLGLSYDSERKWHVLCCDKTPKEPSSTWETETQYQVAIVLK-------NGTQGS 653
Query: 229 VYI 231
VY+
Sbjct: 654 VYV 656
>M.Javanica_Scaff3176g027624 on XP_821693 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 834
Score = 27.3 bits (59), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 7/57 (12%)
Query: 175 LGELQYERRCKFAKLCSTSLPAPPKSVYAPTFSYAVNTQMQDPWEGVSNGTKFLVYI 231
L EL Y+ K+ LCS KS + P Y V +Q NGT+ Y+
Sbjct: 629 LMELSYDSEKKWRVLCSDGTTKRLKSTWEPQTQYQVAIVLQ-------NGTQGSAYV 678
>M.Javanica_Scaff3176g027624 on XP_804542 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 813
Score = 26.9 bits (58), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 24/56 (42%)
Query: 165 EMEKGNSNYYLGELQYERRCKFAKLCSTSLPAPPKSVYAPTFSYAVNTQMQDPWEG 220
++ G+ N L L Y + K+ LC A S + P Y V +Q+ +G
Sbjct: 621 KVNDGDKNTVLLGLSYNKERKWQALCCDGTTAEHSSTWDPQRQYQVAIVLQNEKQG 676
>M.Javanica_Scaff3176g027624 on XP_819146 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 825
Score = 26.9 bits (58), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 7/67 (10%)
Query: 165 EMEKGNSNYYLGELQYERRCKFAKLCSTSLPAPPKSVYAPTFSYAVNTQMQDPWEGVSNG 224
+M + N L L Y+R +A LCS + + P Y V + +NG
Sbjct: 585 KMNDDSENTVLLGLSYKREGNWAVLCSGQTTKKHSNTWEPQTQYQVAIVL-------NNG 637
Query: 225 TKFLVYI 231
T+ VY+
Sbjct: 638 TQGSVYV 644
>M.Javanica_Scaff3176g027624 on XP_821425 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 787
Score = 26.6 bits (57), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 177 ELQYERRCKFAKLCSTSLPAPPKSVYAPTFSYAVNTQMQDPWEG 220
EL Y+ + K+ LCS KS +A Y V+ +Q+ +G
Sbjct: 607 ELSYDSQSKWRLLCSDGTTKRLKSTWATEKQYQVSIVLQNGKQG 650
>M.Javanica_Scaff3176g027624 on XP_807166 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 801
Score = 25.8 bits (55), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 175 LGELQYERRCKFAKLCSTSLPAPPKSVYAPTFSYAVNTQMQDPWEG 220
L EL Y+ + K+ LCS KS +A Y V+ +Q+ +G
Sbjct: 619 LMELSYDSQRKWRLLCSDGTTKRLKSTWATETQYQVSIVLQNGKQG 664
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff29125g095968
(106 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349737 PfEMP1 (Establishment) [Plasmodium falciparum] 27 0.18
CAA70921 MIC5 (Others) [Toxoplasma gondii] 23 3.6
XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum] 22 8.8
XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum] 22 9.3
>M.Javanica_Scaff29125g095968 on XP_001349737 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2199
Score = 27.3 bits (59), Expect = 0.18, Method: Composition-based stats.
Identities = 11/20 (55%), Positives = 13/20 (65%)
Query: 60 CDDVKGLLTQNHNNLDACEI 79
CD VK LT N N DAC++
Sbjct: 914 CDTVKNALTNNDNLTDACKL 933
>M.Javanica_Scaff29125g095968 on CAA70921 MIC5 (Others) [Toxoplasma gondii]
Length = 231
Score = 23.5 bits (49), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 27/57 (47%)
Query: 2 SLMSLQFSLLILLKLSGESPPLAPPRKTVAAITSENLLPTENQSSISSVQFFPNKAG 58
SL+SL ++++ L L+G + LA ++ + T+N + Q P +A
Sbjct: 63 SLLSLGLTVILYLALTGSADALASHLRSRHMEAGRRTMDTQNDVESAGRQSEPMEAA 119
>M.Javanica_Scaff29125g095968 on XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2980
Score = 22.3 bits (46), Expect = 8.8, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 60 CDDVKGLLTQNHNNLDACEINSSVNACKVPPPLPPKPK 97
C+D+ +N+ NS +N C++ P PK
Sbjct: 533 CNDINNGKVKNYQIWQCYYENSEINKCQMTPSSHKVPK 570
>M.Javanica_Scaff29125g095968 on XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2238
Score = 22.3 bits (46), Expect = 9.3, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 18/39 (46%)
Query: 48 SSVQFFPNKAGSCDDVKGLLTQNHNNLDACEINSSVNAC 86
S V+F K CD+ K ++ +N AC ++ C
Sbjct: 91 SDVRFSDTKGAECDNRKIRDSEKKSNYGACAPYRRLHLC 129
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff358g005304
(91 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349207 EBA-175 (Adhesin) [Plasmodium falciparum] 23 5.3
>M.Javanica_Scaff358g005304 on XP_001349207 EBA-175 (Adhesin) [Plasmodium falciparum]
Length = 1462
Score = 22.7 bits (47), Expect = 5.3, Method: Composition-based stats.
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 3 VRINRVASFFSSLLNN 18
VR++R+ SF S +NN
Sbjct: 129 VRVSRILSFLDSRINN 144
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5594g040152
(63 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001352240 PfEMP1 (Establishment) [Plasmodium falciparum] 25 0.41
XP_001611897 variant erythrocyte surface antigen-1, alpha subun... 24 0.52
XP_001609751 variant erythrocyte surface antigen-1, alpha subun... 24 0.58
XP_001609540 variant erythrocyte surface antigen-1, alpha subun... 24 0.58
XP_001608670 variant erythrocyte surface antigen-1, alpha subun... 24 0.66
XP_001610721 variant erythrocyte surface antigen-1, alpha subun... 24 0.66
XP_001608795 variant erythrocyte surface antigen-1, alpha subun... 24 0.71
XP_965999 PfEMP1 (Establishment) [Plasmodium falciparum] 23 0.96
XP_001611365 variant erythrocyte surface antigen-1, alpha subun... 23 1.2
XP_001611442 variant erythrocyte surface antigen-1, alpha subun... 23 1.3
XP_001609666 variant erythrocyte surface antigen-1, alpha subun... 23 1.6
XP_001349437 PfEMP1 (Establishment) [Plasmodium falciparum] 23 1.9
XP_001609450 variant erythrocyte surface antigen-1, alpha subun... 23 2.0
XP_001610568 variant erythrocyte surface antigen-1, alpha subun... 23 2.4
XP_001611900 variant erythrocyte surface antigen-1, alpha subun... 22 2.9
XP_001611736 variant erythrocyte surface antigen-1, alpha subun... 22 3.3
XP_001610196 variant erythrocyte surface antigen-1, alpha subun... 22 3.4
XP_001349031 PfEMP1 (Establishment) [Plasmodium falciparum] 22 3.7
XP_001612314 variant erythrocyte surface antigen-1, alpha subun... 22 3.8
XP_001609163 variant erythrocyte surface antigen-1, alpha subun... 22 4.0
XP_001609033 variant erythrocyte surface antigen-1, alpha subun... 22 4.1
XP_828094 VSG (Establishment) [Trypanosoma brucei] 22 4.2
XP_001609754 variant erythrocyte surface antigen-1, alpha subun... 22 4.4
XP_001350797 PfEMP1 (Establishment) [Plasmodium falciparum] 21 7.2
XP_001350595 PfEMP1 (Establishment) [Plasmodium falciparum] 21 8.0
XP_001609667 variant erythrocyte surface antigen-1, alpha subun... 21 9.0
>M.Javanica_Scaff5594g040152 on XP_001352240 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1315
Score = 24.6 bits (52), Expect = 0.41, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Query: 25 NECVDELCGPPCRDDPVACRKCYDEDKPKKCKQC 58
N+ +DE+ C+D ++ R+C D+ + KCK+C
Sbjct: 314 NKEIDEM-NNQCKDCEMS-RRCNDDSEGGKCKKC 345
>M.Javanica_Scaff5594g040152 on XP_001611897 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1369
Score = 24.3 bits (51), Expect = 0.52, Method: Composition-based stats.
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 41 VACRKCYDEDKPKKCKQCPPGKK 63
+ CR C + P KCK+ G+K
Sbjct: 1156 IECRGCKGQCDPNKCKKGEHGQK 1178
>M.Javanica_Scaff5594g040152 on XP_001609751 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1298
Score = 24.3 bits (51), Expect = 0.58, Method: Composition-based stats.
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 41 VACRKCYDEDKPKKCKQCPPGKK 63
+ CR C + P KCK+ G+K
Sbjct: 1107 IECRGCKGQCDPNKCKKGEHGQK 1129
>M.Javanica_Scaff5594g040152 on XP_001609540 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1349
Score = 24.3 bits (51), Expect = 0.58, Method: Composition-based stats.
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 41 VACRKCYDEDKPKKCKQCPPGKK 63
+ CR C + P KCK+ G+K
Sbjct: 1159 IECRGCKGQCDPNKCKKGEHGQK 1181
>M.Javanica_Scaff5594g040152 on XP_001608670 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1320
Score = 24.3 bits (51), Expect = 0.66, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 4/42 (9%)
Query: 21 AETCNECVDEL---CGPP-CRDDPVACRKCYDEDKPKKCKQC 58
A T ++ +D++ C P C KC E KP CK C
Sbjct: 827 ANTLHKTIDQIKDICNSPKCPSCKSHSTKCGKEGKPTICKTC 868
>M.Javanica_Scaff5594g040152 on XP_001610721 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1331
Score = 24.3 bits (51), Expect = 0.66, Method: Composition-based stats.
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 41 VACRKCYDEDKPKKCKQCPPGKK 63
+ CR C + P KCK+ G+K
Sbjct: 1136 IECRGCKGQCDPNKCKKGEHGQK 1158
>M.Javanica_Scaff5594g040152 on XP_001608795 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1323
Score = 23.9 bits (50), Expect = 0.71, Method: Composition-based stats.
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 41 VACRKCYDEDKPKKCKQCPPGKK 63
+ CR C + P KCK+ G+K
Sbjct: 1125 IECRGCKGQCDPNKCKKGEHGQK 1147
>M.Javanica_Scaff5594g040152 on XP_965999 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1325
Score = 23.5 bits (49), Expect = 0.96, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Query: 25 NECVDELCGPPCRDDPVACRKCYDEDKPKKCKQC 58
N+ +DE+ C+D ++ R+C ++ + +KCK+C
Sbjct: 324 NKEIDEM-NNQCKDCEMS-RRCNNDTEGEKCKKC 355
>M.Javanica_Scaff5594g040152 on XP_001611365 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1335
Score = 23.5 bits (49), Expect = 1.2, Method: Composition-based stats.
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 41 VACRKCYDEDKPKKCKQCPPGKK 63
+ CR C P KCK+ G+K
Sbjct: 1144 IECRGCKGNCDPNKCKKGAHGQK 1166
>M.Javanica_Scaff5594g040152 on XP_001611442 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1350
Score = 23.1 bits (48), Expect = 1.3, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 41 VACRKCYDEDKPKKCKQCPPGK 62
+ CR C + P KCK+ GK
Sbjct: 1157 IECRGCKGQCDPNKCKKGEHGK 1178
>M.Javanica_Scaff5594g040152 on XP_001609666 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1269
Score = 23.1 bits (48), Expect = 1.6, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 5/44 (11%)
Query: 15 LFDATNAETCNECVDELCGPPCRDDPVACRKCYDEDKPKKCKQC 58
L DA N + + C C PPC + +KC + P C+ C
Sbjct: 768 LLDAIN-KLISICNSPKC-PPCHEH---AKKCGKQSNPTVCQTC 806
Score = 21.9 bits (45), Expect = 4.0, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 41 VACRKCYDEDKPKKCKQCPPG 61
+ CR C + P KCK+ G
Sbjct: 1074 IECRGCKGQCDPNKCKKGSHG 1094
>M.Javanica_Scaff5594g040152 on XP_001349437 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2231
Score = 22.7 bits (47), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/46 (23%), Positives = 21/46 (45%)
Query: 12 VIVLFDATNAETCNECVDELCGPPCRDDPVACRKCYDEDKPKKCKQ 57
+ +L N + + +D+ C + A KCY D+ +K K+
Sbjct: 530 IKILKSGENHDDIKQKIDDFCKTEDDESLYAAWKCYKHDEVQKVKR 575
>M.Javanica_Scaff5594g040152 on XP_001609450 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1309
Score = 22.7 bits (47), Expect = 2.0, Method: Composition-based stats.
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 41 VACRKCYDEDKPKKCKQCPPGKK 63
+ CR C + P KCK+ G +
Sbjct: 1116 IECRGCKGQCDPNKCKKGSHGAR 1138
>M.Javanica_Scaff5594g040152 on XP_001610568 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1329
Score = 22.7 bits (47), Expect = 2.4, Method: Composition-based stats.
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 41 VACRKCYDEDKPKKCKQCPPGK 62
+ CR C + P KCK+ G+
Sbjct: 1146 IECRGCKGQCDPNKCKKGEHGQ 1167
>M.Javanica_Scaff5594g040152 on XP_001611900 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1226
Score = 22.3 bits (46), Expect = 2.9, Method: Composition-based stats.
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 41 VACRKCYDEDKPKKCKQCPPGK 62
+ CR C + P KCK+ G+
Sbjct: 1144 IECRGCKGQCDPNKCKKGEHGQ 1165
>M.Javanica_Scaff5594g040152 on XP_001611736 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1365
Score = 22.3 bits (46), Expect = 3.3, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Query: 17 DATNAETCNECVDELCGPPCRDDPVACRKCYDEDKPKKCKQC 58
D CNEC + + G C KC D PK +C
Sbjct: 198 DELEKNLCNEC-ECIKGGSSSHLGRGCTKCKDSGDPKHTCKC 238
>M.Javanica_Scaff5594g040152 on XP_001610196 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1330
Score = 21.9 bits (45), Expect = 3.4, Method: Composition-based stats.
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 41 VACRKCYDEDKPKKCKQ 57
+ CR C + P KCK+
Sbjct: 1141 IECRGCKGQCDPNKCKK 1157
>M.Javanica_Scaff5594g040152 on XP_001349031 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2275
Score = 21.9 bits (45), Expect = 3.7, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 20 NAETCNECVDELCGPPCRDDPVACRKCYDEDKPKKCKQC 58
NAE E VD+L P VAC++ Y ++ + +C
Sbjct: 904 NAEKPCEIVDKLFNNPDNFKEVACQQKYAKNNSRLGWKC 942
>M.Javanica_Scaff5594g040152 on XP_001612314 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1308
Score = 21.9 bits (45), Expect = 3.8, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 42 ACRKCYDEDKPKKCKQCPPG 61
C+KC +++ KK +C G
Sbjct: 189 GCKKCASDEEAKKACECGTG 208
>M.Javanica_Scaff5594g040152 on XP_001609163 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1360
Score = 21.9 bits (45), Expect = 4.0, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 41 VACRKCYDEDKPKKCKQCPPG 61
+ CR C + P KCK+ G
Sbjct: 1173 IECRGCKGQCDPNKCKKGSHG 1193
>M.Javanica_Scaff5594g040152 on XP_001609033 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1270
Score = 21.9 bits (45), Expect = 4.1, Method: Composition-based stats.
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 41 VACRKCYDEDKPKKCKQ 57
+ CR C + P KCK+
Sbjct: 1090 IECRGCKGQCDPNKCKR 1106
Score = 21.6 bits (44), Expect = 5.5, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Query: 29 DELCGPPCRDDPVACRKCYDEDKPKKCKQC 58
++L G P D +C+ D+D KC C
Sbjct: 75 NDLNGSPHGDS--SCKYLQDKDSENKCDTC 102
>M.Javanica_Scaff5594g040152 on XP_828094 VSG (Establishment) [Trypanosoma brucei]
Length = 483
Score = 21.9 bits (45), Expect = 4.2, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 8/35 (22%)
Query: 22 ETCNECVDELCGPPCRDDPVACRKCYDEDKPKKCK 56
++CN+ C PC+ +P E + KKCK
Sbjct: 416 DSCNKKGQNECNSPCKWNP--------EAEGKKCK 442
>M.Javanica_Scaff5594g040152 on XP_001609754 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1295
Score = 21.9 bits (45), Expect = 4.4, Method: Composition-based stats.
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 41 VACRKCYDEDKPKKCKQCPPGKK 63
+ C C + P KCK+ G+K
Sbjct: 1117 IECNACKGQCDPNKCKKGEHGQK 1139
>M.Javanica_Scaff5594g040152 on XP_001350797 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2287
Score = 21.2 bits (43), Expect = 7.2, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 20 NAETCNECVDELCGPPCRDDPVACRKCYDEDKPKKCKQC 58
NAE + VD+L P + VAC++ Y ++ + +C
Sbjct: 877 NAEKPCDIVDKLFQNPEQFKEVACKQKYAKNNSRLGWKC 915
>M.Javanica_Scaff5594g040152 on XP_001350595 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2256
Score = 21.2 bits (43), Expect = 8.0, Method: Composition-based stats.
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 31 LCGPPCRDDPVACRK 45
L P CRD + CRK
Sbjct: 1320 LADPDCRDCHIQCRK 1334
>M.Javanica_Scaff5594g040152 on XP_001609667 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1303
Score = 20.8 bits (42), Expect = 9.0, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 14/44 (31%), Gaps = 12/44 (27%)
Query: 15 LFDATNAETCNECVDELCGPPCRDDPVACRKCYDEDKPKKCKQC 58
L N C C+D KC E KP +C C
Sbjct: 813 LISICNTAKCLTCMDH------------SSKCGQEGKPYRCTVC 844
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3958g032134
(304 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff71g001437
(101 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001610567 variant erythrocyte surface antigen-1, alpha subun... 22 7.3
>M.Javanica_Scaff71g001437 on XP_001610567 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1315
Score = 22.3 bits (46), Expect = 7.3, Method: Composition-based stats.
Identities = 9/15 (60%), Positives = 12/15 (80%)
Query: 3 TNLNKDGLNFKRWIL 17
TN +K+G NFK +IL
Sbjct: 441 TNQHKNGANFKLYIL 455
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6367g043619
(109 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5421g039384
(155 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff28555g095238
(90 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_809580 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.5
XP_001349207 EBA-175 (Adhesin) [Plasmodium falciparum] 22 8.7
>M.Javanica_Scaff28555g095238 on XP_809580 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 776
Score = 24.3 bits (51), Expect = 1.5, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 53 FVLKVIEKKNNQHDGLTKNIEGFLRSIDLNIN 84
F+ V +K DG TK + L S D N N
Sbjct: 271 FLFPVEARKKQNEDGNTKTVSLILYSKDTNTN 302
>M.Javanica_Scaff28555g095238 on XP_001349207 EBA-175 (Adhesin) [Plasmodium falciparum]
Length = 1462
Score = 21.9 bits (45), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 13/59 (22%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 31 IKNDRKEKREFIYLKNVEIKDRFVLKVIEKKNNQHDGLTKNIEGFLRSIDLNINKNMFE 89
I+N+ + +E + ++ EI R + E+KN + K+++ +S+ N K++ +
Sbjct: 753 IRNNEQTSQEAVPEESTEIAHRTETRTDERKN--QEPANKDLKNPQQSVGENGTKDLLQ 809
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff500g006955
(292 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_844689 VSG (Establishment) [Trypanosoma brucei] 30 0.13
XP_812593 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.32
XP_001351321 PfEMP1 (Establishment) [Plasmodium falciparum] 28 1.0
XP_804085 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.5
XP_001609565 variant erythrocyte surface antigen-1, alpha subun... 25 8.2
XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum] 25 9.0
>M.Javanica_Scaff500g006955 on XP_844689 VSG (Establishment) [Trypanosoma brucei]
Length = 509
Score = 30.4 bits (67), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 2/35 (5%)
Query: 167 GKIENKTEAIK--DEIKYENDFPSLIDSKNVTKKT 199
G+IEN+ +++ DE+ + NDF ++ +KNVT T
Sbjct: 343 GEIENQLKSLYGGDEVTFTNDFIKILWTKNVTYHT 377
>M.Javanica_Scaff500g006955 on XP_812593 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 868
Score = 29.3 bits (64), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 7/19 (36%), Positives = 15/19 (78%)
Query: 3 HQKFNKILLLFLLLICYSS 21
H ++ +LLLF++++C+ S
Sbjct: 43 HHFYSAVLLLFVVMMCFGS 61
>M.Javanica_Scaff500g006955 on XP_001351321 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3467
Score = 27.7 bits (60), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 24/101 (23%)
Query: 177 KDEIKYENDFPSLIDSKNVTKKTMKYKYLSAK--KDSSTSNNSEGELECKEKC------- 227
K +IKYEND S + + + Y+YL+ K K + N S C+ KC
Sbjct: 1853 KQKIKYENDKDSYTNDPDTKQSPQAYQYLNKKLEKICPSGNTSAN---CEYKCMKYPSSQ 1909
Query: 228 --------LEDSPQHIKDEKDGIEGSELSKLKVENFVSTSE 260
L+D+P D KD E ++ S+ NF SE
Sbjct: 1910 NNNNMPASLDDTPS---DYKDTCECTK-SQASSRNFSVRSE 1946
>M.Javanica_Scaff500g006955 on XP_804085 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 257
Score = 25.8 bits (55), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
Query: 77 GGKLEQGGGELGGIRGEIESGEEGQIERGKGQIEGSKGGK 116
GGK ++G EL + GE +S + R KGQ++G G K
Sbjct: 215 GGKWKEGKFELKLVVGEAQS-----LLRAKGQVDGLNGAK 249
>M.Javanica_Scaff500g006955 on XP_001609565 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1341
Score = 24.6 bits (52), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 32/211 (15%)
Query: 36 GKIKGSGGEIEGGKGGELVG-IRDEIESGKEEQIEV----------KGGGGKGGKLEQGG 84
GK+KG + GK GEL G ++D +E E +++ K G KG + G
Sbjct: 673 GKVKGVLETVLKGKSGELTGALKDLLEKIGEVVVQLGNAQEALEGKKPEGIKGVQAALGT 732
Query: 85 GE--LGGIRGEIESGEEGQIERGKGQI-----EGSKGGKLEQVGVGHGGIKSDIERGEED 137
+ L G ++ SG G++E K ++ GG L V VG G+ +GE D
Sbjct: 733 AKEALEGAVKKVNSGLTGKLETAKAKLVELTMNSGSGGILGDV-VGASGLGMVTSKGEYD 791
Query: 138 KIEVKGGERVPEQFVKKSDKETKSLKKVWG---KIENKTEAIKDEIKYENDFPSLIDSKN 194
G ++ K +E L K W K++ E ++D+I +D +ID+ +
Sbjct: 792 ----PGKNKISAAIHKV--EEVLKLCKEWTEKEKVKESLECLQDDIFTSSD---IIDAVH 842
Query: 195 VTKKTMKYKYLSAKKDSSTSNNSEGELECKE 225
+K LSA D + N+ CK+
Sbjct: 843 EVEKEHT-ALLSAINDLISICNTAQCPGCKD 872
>M.Javanica_Scaff500g006955 on XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2980
Score = 24.6 bits (52), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 7/54 (12%)
Query: 176 IKDEIKYENDFPSLIDSKNVTKKTMKYKYLSAKKDSSTSNNSEGELECKEKCLE 229
+K Y ND +V K T Y+YLS K + N +C KC++
Sbjct: 1515 VKSTSPYNND-------NDVNKSTHAYEYLSKKLTNIPCTNGNTTGKCDYKCMD 1561
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3671g030495
(752 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAY40294 Pyroglutamyl peptidase I (Others) [Trypanosoma brucei] 27 3.2
XP_001350935 PfEMP1 (Establishment) [Plasmodium falciparum] 27 4.6
XP_819344 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 6.2
XP_804800 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 8.6
>M.Javanica_Scaff3671g030495 on AAY40294 Pyroglutamyl peptidase I (Others) [Trypanosoma brucei]
Length = 222
Score = 26.9 bits (58), Expect = 3.2, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
Query: 260 PRWY--FDAGAHKCKRFLYRGM 279
PRW +DAG + C LYRG+
Sbjct: 154 PRWIISYDAGRYYCNYALYRGV 175
>M.Javanica_Scaff3671g030495 on XP_001350935 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2268
Score = 27.3 bits (59), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 11/40 (27%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 388 EFVYKGIKGNENSFLTIDECKAICEKLPNPCPIHYDLGER 427
+ +Y G K N N ++ +D+ K I +K+ + ++ D+G++
Sbjct: 1129 DILYSGDKENGNKYMLVDDIKDISDKIKS--ILNSDVGQK 1166
>M.Javanica_Scaff3671g030495 on XP_819344 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 861
Score = 26.6 bits (57), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 169 PTPPPYTQNVPGDVVSSFQRPNPCPE 194
P P T+N PG+++ S +P P E
Sbjct: 714 PITAPVTENAPGNMLQSPAKPQPLEE 739
>M.Javanica_Scaff3671g030495 on XP_804800 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 940
Score = 26.2 bits (56), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 4/33 (12%)
Query: 570 VCCSSGVGKACNQSLAEGFGNALLSRWYYNFKD 602
VCC +G G A ++ A G GNA R Y++++D
Sbjct: 47 VCCGTG-GAASSEVTAPGSGNA---RTYFDWRD 75
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7853g049720
(131 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_626924 Hsp90 (Heat shock protein) [Cryptosporidium parvum] 28 0.15
AAB97088 Hsp90 (Heat shock protein) [Eimeria tenella] 28 0.16
XP_806299 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.26
XP_001609935 variant erythrocyte surface antigen-1, alpha subun... 25 1.7
XP_814625 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.8
XP_819343 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.9
XP_808836 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.6
XP_816720 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.9
XP_827715 VSG (Establishment) [Trypanosoma brucei] 24 3.5
XP_001349033 PfEMP1 (Establishment) [Plasmodium falciparum] 24 3.7
XP_827712 VSG (Establishment) [Trypanosoma brucei] 24 4.4
XP_805883 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.9
XP_816725 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 7.3
XP_820389 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 8.8
XP_803927 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 9.5
>M.Javanica_Scaff7853g049720 on XP_626924 Hsp90 (Heat shock protein) [Cryptosporidium parvum]
Length = 255
Score = 27.7 bits (60), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 45 FPVAGKLLVKRKTKKHDEEQYLWAGKCGGS 74
+ VA K+ V TK + +EQY+W GGS
Sbjct: 139 YLVADKVTVI--TKHNGDEQYIWESSAGGS 166
>M.Javanica_Scaff7853g049720 on AAB97088 Hsp90 (Heat shock protein) [Eimeria tenella]
Length = 255
Score = 27.7 bits (60), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Query: 57 TKKHDEEQYLWAGKCGGSDGKTKMDNRRKAKLDWATGNLIIENFSEEDEGAY 108
+K +D+EQY+W GGS K D G II + +ED+G Y
Sbjct: 139 SKHNDDEQYVWESAAGGSFTVQKDDKYEP----LGRGTRIILHL-KEDQGEY 185
>M.Javanica_Scaff7853g049720 on XP_806299 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1047
Score = 27.3 bits (59), Expect = 0.26, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 7/55 (12%)
Query: 26 ENSEAALARAFIKKGDKFEFPVA-------GKLLVKRKTKKHDEEQYLWAGKCGG 73
+ + L+ F K G+K+E P LVK K KK DE ++ A GG
Sbjct: 267 DGTNVLLSMRFPKSGNKWELPYETPGNGCRDPTLVKWKEKKDDERLFMMAHCAGG 321
>M.Javanica_Scaff7853g049720 on XP_001609935 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1317
Score = 25.0 bits (53), Expect = 1.7, Method: Composition-based stats.
Identities = 11/21 (52%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Query: 70 KCG-GSDGKTKMDNRRKAKLD 89
KCG GS+GK + DN++ LD
Sbjct: 123 KCGNGSNGKCQKDNKKHHGLD 143
>M.Javanica_Scaff7853g049720 on XP_814625 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 941
Score = 25.0 bits (53), Expect = 1.8, Method: Composition-based stats.
Identities = 13/25 (52%), Positives = 13/25 (52%)
Query: 35 AFIKKGDKFEFPVAGKLLVKRKTKK 59
F KGDK FPV G VK KK
Sbjct: 248 GFEMKGDKLVFPVEGMKSVKEGKKK 272
>M.Javanica_Scaff7853g049720 on XP_819343 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 953
Score = 25.0 bits (53), Expect = 1.9, Method: Composition-based stats.
Identities = 13/25 (52%), Positives = 13/25 (52%)
Query: 35 AFIKKGDKFEFPVAGKLLVKRKTKK 59
F KGDK FPV G VK KK
Sbjct: 245 GFEMKGDKLVFPVEGTKNVKEGKKK 269
>M.Javanica_Scaff7853g049720 on XP_808836 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 376
Score = 24.3 bits (51), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 105 EGAYSFPLEKANPGLATSLVIVELKN 130
+G + FP+E G A SL+I N
Sbjct: 273 DGTFVFPMEGTKDGKAVSLIIYSSDN 298
>M.Javanica_Scaff7853g049720 on XP_816720 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 782
Score = 24.3 bits (51), Expect = 2.9, Method: Composition-based stats.
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 105 EGAYSFPLEKANPGLATSLVIVELKNG 131
+G + FP+E G A SL+I N
Sbjct: 275 DGTFVFPMEGTKDGKAVSLIIYSSDNA 301
>M.Javanica_Scaff7853g049720 on XP_827715 VSG (Establishment) [Trypanosoma brucei]
Length = 473
Score = 23.9 bits (50), Expect = 3.5, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 25/50 (50%)
Query: 81 DNRRKAKLDWATGNLIIENFSEEDEGAYSFPLEKANPGLATSLVIVELKN 130
+ +R + +TGN ++++ E++ +Y + E N + S +KN
Sbjct: 408 EKKRSVRKPISTGNGATKSYNSEEDDSYEYECEGENSACSDSPAKPTVKN 457
>M.Javanica_Scaff7853g049720 on XP_001349033 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2064
Score = 23.9 bits (50), Expect = 3.7, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Query: 68 AGKCGGSDGKTKMDNRRKAKLDWATGNLIIENFSEE 103
+G CGG DG+ +M + K W +G + + +E+
Sbjct: 817 SGPCGGKDGRNEM---FEVKDGWKSGADVSKEHAED 849
>M.Javanica_Scaff7853g049720 on XP_827712 VSG (Establishment) [Trypanosoma brucei]
Length = 474
Score = 23.9 bits (50), Expect = 4.4, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 25/50 (50%)
Query: 81 DNRRKAKLDWATGNLIIENFSEEDEGAYSFPLEKANPGLATSLVIVELKN 130
+ +R + +TGN ++++ E++ +Y + E N + S +KN
Sbjct: 409 EKKRSVRKPISTGNGATKSYNSEEDDSYEYECEGENSACSDSPAKPTVKN 458
>M.Javanica_Scaff7853g049720 on XP_805883 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1038
Score = 23.5 bits (49), Expect = 4.9, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 7/55 (12%)
Query: 26 ENSEAALARAFIKKGDKFEFP--VAGK-----LLVKRKTKKHDEEQYLWAGKCGG 73
+ + L+ F G+K+E GK LVK K KK DE ++ A GG
Sbjct: 267 DGTNVLLSMRFPNSGNKWELSSETPGKGCRDPTLVKWKEKKDDESLFMMAHCAGG 321
>M.Javanica_Scaff7853g049720 on XP_816725 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 775
Score = 23.1 bits (48), Expect = 7.3, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 105 EGAYSFPLEKANPGLATSLVI 125
+G + FP+E G A SL+I
Sbjct: 270 DGTFVFPVEGTKNGKAVSLII 290
>M.Javanica_Scaff7853g049720 on XP_820389 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 774
Score = 22.7 bits (47), Expect = 8.8, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 102 EEDEGAYSFPLEKANPGLATSLVIVELKNG 131
+ +G FP+E G A SL+I N
Sbjct: 265 QTKDGTLVFPMEGTKDGKAVSLIIYSSDNA 294
>M.Javanica_Scaff7853g049720 on XP_803927 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 412
Score = 22.7 bits (47), Expect = 9.5, Method: Composition-based stats.
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 105 EGAYSFPLEKANPGLATSLVIVELKNG 131
+G FP+E G A SL+I +G
Sbjct: 271 DGTLVFPVEGTKDGKAVSLIIYTATDG 297
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff665g008695
(274 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAC43441 eIF4A (Others) [Toxoplasma gondii] 27 1.4
XP_965999 PfEMP1 (Establishment) [Plasmodium falciparum] 26 2.3
XP_827754 VSG (Establishment) [Trypanosoma brucei] 25 5.1
>M.Javanica_Scaff665g008695 on CAC43441 eIF4A (Others) [Toxoplasma gondii]
Length = 255
Score = 26.6 bits (57), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 222 LLRSIYGKDDQNPLKINKRPIQPINDR 248
LLR IY + P I +R I+PI DR
Sbjct: 50 LLRGIYSYGFEKPSAIQQRGIKPILDR 76
>M.Javanica_Scaff665g008695 on XP_965999 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1325
Score = 26.2 bits (56), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 7/53 (13%)
Query: 42 EKCKEGRNQSPINIQTKSLKINC----FDKLELVNYNNSGIVEVNNNGHGVIV 90
EKC N+ N+ T+ K++ F K +L+ +NNSG+ N+ +GV+V
Sbjct: 485 EKCPNEENK---NVCTRFDKVSSCTSLFFKNDLIEWNNSGVKNKENDNNGVLV 534
>M.Javanica_Scaff665g008695 on XP_827754 VSG (Establishment) [Trypanosoma brucei]
Length = 480
Score = 25.0 bits (53), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 20/48 (41%)
Query: 25 KDVEWGYEDHNGPHTWEEKCKEGRNQSPINIQTKSLKINCFDKLELVN 72
K V GP T EKCK+ ++++ K C D LVN
Sbjct: 417 KSVSVTQAQTGGPETTTEKCKDNKSEAVCKDGCKWEGTECKDSSILVN 464
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4504g034939
(333 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350936 PfEMP1 (Establishment) [Plasmodium falciparum] 27 3.0
XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum] 26 5.2
>M.Javanica_Scaff4504g034939 on XP_001350936 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2163
Score = 26.6 bits (57), Expect = 3.0, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 8/48 (16%)
Query: 23 GGDDELLELPFDPTHVNWFEERG----KRKWD----INWDLKLGRSRG 62
GGD L + PT+ + EE G K++ + I ++ K+G+ RG
Sbjct: 1180 GGDTPLTQFVLRPTYFRYLEEWGQNFCKKRTEMLEKIKYECKVGQGRG 1227
>M.Javanica_Scaff4504g034939 on XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3954
Score = 25.8 bits (55), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 23/48 (47%)
Query: 156 IVEHENELAGMTPQQLKDLIANNTPKATRNIFLIRHGQYKKEKAKEEK 203
+ EHEN ++ + Q K L N P ++ F K +KA ++K
Sbjct: 2058 VNEHENVISFLNKQSYKQLYENIKPYSSAADFFTSLNHCKPDKANDDK 2105
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7611g048777
(83 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff25241g090605
(92 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAC34726 MIC4 (Adhesin) [Eimeria tenella] 31 0.004
XP_001351876 PfEMP1 (Establishment) [Plasmodium falciparum] 24 2.1
>M.Javanica_Scaff25241g090605 on CAC34726 MIC4 (Adhesin) [Eimeria tenella]
Length = 255
Score = 31.2 bits (69), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Query: 16 DFLTWTGSWA--CSPGKTQAQEKPRKNIPPQRNLSDCGVFSCLFAEFASRRAPITFTQEH 73
DF W+ A C PG T ++ R N P + + CG F C + P+ T +
Sbjct: 161 DFGDWSPPLAGDCVPGTTHTRQ--RANCPNHKEVRVCGAFDCSQCSVNATCDPLGATCQC 218
Query: 74 IPYFR 78
P FR
Sbjct: 219 KPGFR 223
>M.Javanica_Scaff25241g090605 on XP_001351876 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3164
Score = 23.9 bits (50), Expect = 2.1, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 11/22 (50%)
Query: 24 WACSPGKTQAQEKPRKNIPPQR 45
W C QEK R IPP+R
Sbjct: 2537 WKCYKNIKLYQEKKRVCIPPRR 2558
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3033g026749
(462 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_803096 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.86
XP_001608669 variant erythrocyte surface antigen-1, beta subuni... 28 1.5
XP_001608667 variant erythrocyte surface antigen-1, beta subuni... 27 2.2
AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum] 26 5.5
AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum] 26 5.6
AAL38222 PfNBP1 (Adhesin) [Plasmodium falciparum] 26 5.7
AAL38218 PfNBP1 (Adhesin) [Plasmodium falciparum] 26 5.7
>M.Javanica_Scaff3033g026749 on XP_803096 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 753
Score = 28.5 bits (62), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 12/82 (14%)
Query: 238 IELEEDVPADIANHICLLNLHENTKNIDWQVNAYPVLAYGWGPD--------PGTQECHG 289
+ +E + A I +L + +++ + NA Y W D P + G
Sbjct: 374 LRVEALITATIEGRKVMLYIQRGYTSVENEANAL----YLWVTDNNRSLSVGPVGMDNVG 429
Query: 290 KNKRGGCLLYAHSQLHLLKLPG 311
K + G LLY+ LHLLK G
Sbjct: 430 KGELAGALLYSDGSLHLLKQRG 451
>M.Javanica_Scaff3033g026749 on XP_001608669 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 607
Score = 27.7 bits (60), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 181 TDVHNYITVYIGSNCLINSNVV---FGECNSKTHQQRF 215
T VH +++GS CLI S + F CN+K ++R+
Sbjct: 230 TKVHLLARIFLGSVCLIWSGLSQLGFLTCNAKGSERRW 267
>M.Javanica_Scaff3033g026749 on XP_001608667 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1139
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 180 ETDVHNYITVYIGSNCLINSNVV---FGECNSKTHQQRF 215
T VH +++GS CLI S + F CN+K ++R+
Sbjct: 224 STKVHLLARIFLGSVCLIWSGLSQLGFLTCNAKGSERRW 262
>M.Javanica_Scaff3033g026749 on AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2969
Score = 26.2 bits (56), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 233 YDYAIIELEEDVPADIANHICLLNLH-ENTKNI 264
YD ++I +E++ +I N I LN H EN NI
Sbjct: 2167 YDSSLINKDEEIKKEINNQIIELNKHNENISNI 2199
>M.Javanica_Scaff3033g026749 on AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2965
Score = 26.2 bits (56), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 233 YDYAIIELEEDVPADIANHICLLNLH-ENTKNI 264
YD ++I +E++ +I N I LN H EN NI
Sbjct: 2171 YDSSLINKDEEIKKEINNQIIELNKHNENISNI 2203
>M.Javanica_Scaff3033g026749 on AAL38222 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2976
Score = 26.2 bits (56), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 233 YDYAIIELEEDVPADIANHICLLNLH-ENTKNI 264
YD ++I +E++ +I N I LN H EN NI
Sbjct: 2178 YDSSLINKDEEIKKEINNQIIELNKHNENISNI 2210
>M.Javanica_Scaff3033g026749 on AAL38218 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2977
Score = 26.2 bits (56), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 233 YDYAIIELEEDVPADIANHICLLNLH-ENTKNI 264
YD ++I +E++ +I N I LN H EN NI
Sbjct: 2175 YDSSLINKDEEIKKEINNQIIELNKHNENISNI 2207
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff512g007076
(68 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAA53688 gp63 (Invasion) [Leishmania donovani] 26 0.17
AAA29236 gp63 (Invasion) [Leishmania donovani] 26 0.17
AAA29238 gp63 (Invasion) [Leishmania donovani] 26 0.17
>M.Javanica_Scaff512g007076 on AAA53688 gp63 (Invasion) [Leishmania donovani]
Length = 255
Score = 25.8 bits (55), Expect = 0.17, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 30 WYRLRLKKKHISLLNPNQHCSPVEKYIKR 58
W LR+ L +P HC+ V ++IKR
Sbjct: 103 WGALRIAVSTEDLTDPAYHCARVGQHIKR 131
>M.Javanica_Scaff512g007076 on AAA29236 gp63 (Invasion) [Leishmania donovani]
Length = 255
Score = 25.8 bits (55), Expect = 0.17, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 30 WYRLRLKKKHISLLNPNQHCSPVEKYIKR 58
W LR+ L +P HC+ V ++IKR
Sbjct: 103 WGALRIAVSTEDLTDPAYHCARVGQHIKR 131
>M.Javanica_Scaff512g007076 on AAA29238 gp63 (Invasion) [Leishmania donovani]
Length = 255
Score = 25.8 bits (55), Expect = 0.17, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 30 WYRLRLKKKHISLLNPNQHCSPVEKYIKR 58
W LR+ L +P HC+ V ++IKR
Sbjct: 103 WGALRIAVSTEDLTDPAYHCARVGQHIKR 131
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7111g046784
(314 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001611900 variant erythrocyte surface antigen-1, alpha subun... 33 0.022
XP_001610713 variant erythrocyte surface antigen-1, alpha subun... 28 0.89
>M.Javanica_Scaff7111g046784 on XP_001611900 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1226
Score = 33.1 bits (74), Expect = 0.022, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 30 LPFLEEASPSEPKSLNQKKKILEKHRQNFQNKKYFPLYKEDKIWSPTENDF 80
LP+ SP+ PK L K ILEK +F++KK Y+ + T ++F
Sbjct: 496 LPY----SPAYPKILTHSKGILEKVAPDFEDKKQLSFYQTGRTAPITVHEF 542
>M.Javanica_Scaff7111g046784 on XP_001610713 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1294
Score = 28.1 bits (61), Expect = 0.89, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Query: 30 LPFLEEASPSEPKSLNQKKKILEKHRQNFQNKKYFPLYKEDKIWSPTENDF 80
LP+ S + PK L K +LEK + +NKK Y+ + T ++F
Sbjct: 455 LPY----SEAYPKILQHSKGVLEKVAPDVENKKQLSFYQTGRTAPITVHEF 501
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6793g045470
(160 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_652394 Igl2 (Adhesin) [Entamoeba histolytica] 23 8.1
>M.Javanica_Scaff6793g045470 on XP_652394 Igl2 (Adhesin) [Entamoeba histolytica]
Length = 1105
Score = 23.5 bits (49), Expect = 8.1, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 5/72 (6%)
Query: 25 CLNDGEPILLGQNSNEFRCECLTGFFGPFCEYQDQVNPLKE-KPPIPVRYRNSDTYQRIK 83
CL +P+ +G +E C TG++ E + N E SDTY+ I
Sbjct: 858 CLTCTDPLKIGSKCDE----CKTGYYMSNGECKPCTNHCSECSSAAECTVCESDTYKVIS 913
Query: 84 RDDINVITTGFF 95
+ N GF+
Sbjct: 914 GNGCNACVDGFY 925
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4639g035618
(181 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609040 variant erythrocyte surface antigen-1, alpha subun... 25 4.8
XP_819490 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 9.8
>M.Javanica_Scaff4639g035618 on XP_001609040 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1335
Score = 24.6 bits (52), Expect = 4.8, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 15/54 (27%)
Query: 85 AYDRQLD------EQIKIKSKGDVGTSG--------VFTSGKWNPVFVEWYHSF 124
AY LD E++ +K GD G+S +G+W+P+ V Y+ F
Sbjct: 464 AYKEMLDYAKRRLEKV-LKKPGDAGSSASNQETQLKFHQTGRWHPITVHEYNLF 516
>M.Javanica_Scaff4639g035618 on XP_819490 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 997
Score = 23.5 bits (49), Expect = 9.8, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 19/99 (19%)
Query: 34 DFSSQEVIKKACNEKLLAHHPDKNPND----------KEAHAITKDVIKARKILLN--ET 81
D ++ ++ K+ NEKL++ + +KN +D +E K V+K L E+
Sbjct: 372 DAAASSLLMKSGNEKLISVYENKNGDDGSYSLVAVSLREQLERIKSVVKTWAALDTAFES 431
Query: 82 RKIAYDRQLDEQIKIKSKGDVGT-------SGVFTSGKW 113
+ +D + K G V T SG F+ KW
Sbjct: 432 CRSGSSATVDPRKKGMCAGPVPTDGLVGFLSGNFSDNKW 470
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff721g009271
(442 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_818002 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 1.1
XP_829795 VSG (Establishment) [Trypanosoma brucei] 27 3.1
XP_804086 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 6.5
AAX07979 alpha-14 giardin (Others) [Giardia duodenalis] 25 7.4
XP_001349514 PfEMP1 (Establishment) [Plasmodium falciparum] 25 7.6
XP_001349035 PfEMP1 (Establishment) [Plasmodium falciparum] 25 8.8
AAN16379 MIC11 (Others) [Toxoplasma gondii] 25 9.7
>M.Javanica_Scaff721g009271 on XP_818002 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 728
Score = 28.1 bits (61), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 19/39 (48%)
Query: 55 IVGDVETSDKGVDTFVKTRKLYHRPIVKSEEEPFDTIGN 93
I GD E D+G VK LY RP+ SE + I N
Sbjct: 662 IGGDEEDMDRGSSVMVKNVFLYDRPLSVSELKMVRKINN 700
>M.Javanica_Scaff721g009271 on XP_829795 VSG (Establishment) [Trypanosoma brucei]
Length = 506
Score = 26.6 bits (57), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 327 PPICGRNCGVVIDPNGCQSCDCLWRSKNCRSDIE--CRLLDGQ 367
PPI C C+ +C W +K +S+ E C+ +G+
Sbjct: 397 PPIAQEECNKHKSKKTCEEKNCKWEAKGGKSETEGTCKPKEGE 439
>M.Javanica_Scaff721g009271 on XP_804086 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 742
Score = 25.8 bits (55), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 57/146 (39%), Gaps = 10/146 (6%)
Query: 25 DAECRSDIDCEQFKS-CQPICRLQCKSTIC--TIVGDVETSDKGVDTFVKTRKLYHRPIV 81
D E D D E +KS + +L +I I GD ++S + V LY+R +
Sbjct: 367 DTEDYEDEDYEGYKSFSHKLRKLLSSHSISHFYIGGDGKSSSGNIHVTVSNVLLYNRLLQ 426
Query: 82 KSEEEPFDTIGNPFASEALLRSHPPMPEKRDLITHL-TISESELEAELK-QHLEPEKSGL 139
E P ASEA + + PE +HL SE + + Q L PEKS
Sbjct: 427 DDELNPLMKTKAVAASEAEVSA----PEGAPQNSHLGQASEKDTTPSTQNQGLSPEKSKN 482
Query: 140 GSFVTAPTVFNDAKLT-IGTSVAHGK 164
+ A T TS A G+
Sbjct: 483 EKYSAGSGQTTSADFTGSSTSAAEGE 508
>M.Javanica_Scaff721g009271 on AAX07979 alpha-14 giardin (Others) [Giardia duodenalis]
Length = 255
Score = 25.0 bits (53), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 34/77 (44%)
Query: 100 LLRSHPPMPEKRDLITHLTISESELEAELKQHLEPEKSGLGSFVTAPTVFNDAKLTIGTS 159
+ RS+PP + T I+ + L+A LK+HL + L + P +L G +
Sbjct: 35 IARSYPPNQLRNMQRTFQAITGTFLDAFLKKHLSKDFESLVLMLYKPRAQLLCELIRGAT 94
Query: 160 VAHGKRSPGVDDITLTM 176
G + D+ LT+
Sbjct: 95 KGAGTDEKCLVDVLLTI 111
>M.Javanica_Scaff721g009271 on XP_001349514 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2120
Score = 25.4 bits (54), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 43 ICRLQCKSTICTIVGDVETSDKGVDTFVKTRKLYHRPIVKSEEEPFDTIG-NPFASEALL 101
+C L K++ + V+T+D G D F K + Y V ++E T G PF + +
Sbjct: 1057 VCALTYKNSGDKKIEQVKTADDGEDLFQKLKTQYEYNTVTLKDENSGTEGAKPFTPKTVS 1116
Query: 102 RS 103
S
Sbjct: 1117 SS 1118
>M.Javanica_Scaff721g009271 on XP_001349035 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2239
Score = 25.4 bits (54), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 321 LKSCDSPPICGRNCGVVIDPNGCQSCDCLWR 351
L C + P+ G NC V+ NGC W+
Sbjct: 1362 LDYCKTCPLNGVNCNVIRGTNGCIENRQKWK 1392
>M.Javanica_Scaff721g009271 on AAN16379 MIC11 (Others) [Toxoplasma gondii]
Length = 204
Score = 24.6 bits (52), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 84 EEEPFDTIGNPFASEALLRSHPPMPEKRDLITHLTISESELEAELKQHLEPEKSGL 139
+E F + +P SEA +R H + E++ + T T++ + LK +EP K+ L
Sbjct: 120 DEADFSFLDSPKTSEASIRPHGFLQERKFVDTLKTLA----KGALKTFVEPMKAAL 171
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5398g039288
(489 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Q36736 KMP-11 (Others) [Leishmania donovani] 28 0.41
XP_808182 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.63
XP_807804 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 3.3
XP_819719 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 3.4
XP_820067 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 4.0
XP_819342 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 7.9
XP_829776 VSG (Establishment) [Trypanosoma brucei] 25 8.9
>M.Javanica_Scaff5398g039288 on Q36736 KMP-11 (Others) [Leishmania donovani]
Length = 92
Score = 27.7 bits (60), Expect = 0.41, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 176 SEFMAAKIHSSGFDSSMKGNYEEEEQFIKECKEKF 210
++F A K S M+ +YE+ E+ IKE EKF
Sbjct: 28 AKFFADKPDESTLSPEMREHYEKFERMIKEHTEKF 62
>M.Javanica_Scaff5398g039288 on XP_808182 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 918
Score = 29.3 bits (64), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 16/112 (14%)
Query: 12 WRT-YWPTSTLLQPKDGE--KISYYDVTSLYPFINVSTKYPVGHPKVHIRNEDVHWSKPE 68
WR Y + + KDG+ + + F ++PVG N+ H++
Sbjct: 520 WRDEYLGVNATVTNKDGDAGETKATKTSEGVKFKGAWAEWPVGE---QGENQPYHFA--- 573
Query: 69 DNNFGL-AILKIFVIPPRSIDIPVLPMKIGEDDERLLFPLCSQCAREHPEGG 119
+ NF L A + I +P + IPV+ +K+ D++ +LF L H GG
Sbjct: 574 NYNFTLVATVSIDGVPKGNTPIPVMGVKMNGDEKTVLFGLS------HENGG 619
>M.Javanica_Scaff5398g039288 on XP_807804 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1054
Score = 26.9 bits (58), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 74 LAILKIFVIPPRSIDIPVLPMKIGEDDERLLFPL 107
+A + I +P IP+L +K+ E D L+F L
Sbjct: 577 VATVSIHEVPEGGTPIPLLGVKLSETDSPLIFGL 610
>M.Javanica_Scaff5398g039288 on XP_819719 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1053
Score = 26.9 bits (58), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 74 LAILKIFVIPPRSIDIPVLPMKIGEDDERLLFPL 107
+A + I +P IP+L +K+ E D L+F L
Sbjct: 576 VATVSIHEVPEGGTPIPLLGVKLSETDSPLIFGL 609
>M.Javanica_Scaff5398g039288 on XP_820067 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 722
Score = 26.6 bits (57), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 8/44 (18%)
Query: 274 DELTPDILLISYIKKK----DWIEEHNCSNVVISLWTTSAARIH 313
+ TP L+ ++ WI+E+ C N + T AA++H
Sbjct: 487 ESFTPTAGLVGFLSNAASGDTWIDEYRCVNATV----TKAAKVH 526
>M.Javanica_Scaff5398g039288 on XP_819342 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 825
Score = 25.8 bits (55), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 14/59 (23%), Positives = 24/59 (40%)
Query: 302 ISLWTTSAARIHLLRAMQKVVRSPGCKLLYTDTDSLIFVHPINNCPLPLGPHLGDLTDE 360
+ LW T AR+H + + + L D L+ ++ N P P LT++
Sbjct: 388 LHLWVTDNARVHDVGPISREDDDSAASSLLKSKDELVLLYEKRNGDGPYSPVAMRLTEQ 446
>M.Javanica_Scaff5398g039288 on XP_829776 VSG (Establishment) [Trypanosoma brucei]
Length = 471
Score = 25.4 bits (54), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 240 FSLRNFGLSQCAITDNPAELHKYYNDKSIEITGLDELTPDI 280
F++ + CA+T+ LH + I TG E T +I
Sbjct: 187 FTIAGLTVKACAVTNKGCRLHTRKTSEGIISTGSPEQTKEI 227
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2811g025359
(229 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_829786 VSG (Establishment) [Trypanosoma brucei] 30 0.075
XP_001350409 PfEMP1 (Establishment) [Plasmodium falciparum] 28 0.50
XP_817007 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.7
XP_001349030 PfEMP1 (Establishment) [Plasmodium falciparum] 27 1.7
XP_808182 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 8.6
>M.Javanica_Scaff2811g025359 on XP_829786 VSG (Establishment) [Trypanosoma brucei]
Length = 482
Score = 30.4 bits (67), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 45/110 (40%), Gaps = 11/110 (10%)
Query: 99 PQMFDPYFGIYSFNNPSMNLYNPYMYPIGYGHYYSPSSSDWQPWTGGGFNRGINTPTLIG 158
P++ + + + + ++ NP + + Y + S+S W WTG + I+ T +
Sbjct: 178 PKLVEKFITVDT--TKLLDNINPSIITVTYNSGCTGSTS-WTSWTGAKTSCAIDDITNVA 234
Query: 159 PPPPPPPPPPPPPPTLSPLP-NLFQPNFGE-------TTNGNNNNMASSL 200
P P P +P +++ N E T G +++ +SL
Sbjct: 235 NGPTAKPAEAPDATAGTPKKIKIYKDNKPEQGCEPLATNGGKDDDQKTSL 284
>M.Javanica_Scaff2811g025359 on XP_001350409 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2223
Score = 28.1 bits (61), Expect = 0.50, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 161 PPPPPPPPPPPPTLSPLPNLFQPNFGETT 189
PPP P PP +P F P +TT
Sbjct: 1735 PPPAQAPDVAPPARAPADQPFDPTILQTT 1763
>M.Javanica_Scaff2811g025359 on XP_817007 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 910
Score = 26.2 bits (56), Expect = 1.7, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 183 PNFGETTNGNNNNMASSLSSPFGKKFRSRLGGGGPSSD 220
P G T NG++ + LS GKK R+ L GGG D
Sbjct: 590 PLMGATMNGDDKTVLLGLSYDSGKK-RAVLCGGGQKKD 626
>M.Javanica_Scaff2811g025359 on XP_001349030 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 26.6 bits (57), Expect = 1.7, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 10/21 (47%)
Query: 159 PPPPPPPPPPPPPPTLSPLPN 179
PPPP P PPP PN
Sbjct: 800 PPPPETPARNLPPPDTQRDPN 820
>M.Javanica_Scaff2811g025359 on XP_808182 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 918
Score = 24.3 bits (51), Expect = 8.6, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 21/49 (42%)
Query: 176 PLPNLFQPNFGETTNGNNNNMASSLSSPFGKKFRSRLGGGGPSSDALLN 224
P N P G NG+ + LS G K++ GGG + D +N
Sbjct: 589 PKGNTPIPVMGVKMNGDEKTVLFGLSHENGGKWKLLCGGGTDTEDQSVN 637
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2545g023642
(191 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351513 PfEMP1 (Establishment) [Plasmodium falciparum] 25 4.5
>M.Javanica_Scaff2545g023642 on XP_001351513 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2152
Score = 24.6 bits (52), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 40/107 (37%), Gaps = 32/107 (29%)
Query: 56 GTLRYLKGVNG----IREFLQKTDA--------YDNYHFSRNYDIEENFSNEYKLEIFVN 103
G + +KG G ++E+L K Y +H S+ YDI
Sbjct: 1462 GENKCIKGCKGKCECVKEWLNKKSTEWKQIKERYKVHHDSKGYDIA-------------- 1507
Query: 104 RHHIIEPIIVQNNSIIYVVLNRSIATYKILTLNQEYLDKIINYFENP 150
H + +N S + N+SI Y++L EY D I + P
Sbjct: 1508 --HKVRSYFEKNESDV----NKSIDNYEVLKKKDEYEDCIDSDTCGP 1548
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6283g043247
(130 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_819146 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.19
XP_808840 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.63
XP_813677 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.3
XP_808550 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.4
XP_816233 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.9
XP_817615 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.9
XP_813143 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.3
XP_808213 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.5
XP_811304 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.6
XP_821293 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 6.5
XP_821381 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 7.8
>M.Javanica_Scaff6283g043247 on XP_819146 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 825
Score = 27.7 bits (60), Expect = 0.19, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Query: 54 SSSTTVPTTKMLQDSGYRSTISNSNFEEEMMVIAEKERKEMRRQRRKTGLSSQQKPKEEG 113
SS V + +L SG N+N EEE++ + EK++ E L++Q K +E
Sbjct: 401 SSDDDVAASSLLYKSG------NNNDEEELITLYEKKKGESSSGMVSVLLTAQLKRVKEV 454
Query: 114 IMTVK 118
+ T K
Sbjct: 455 LTTWK 459
>M.Javanica_Scaff6283g043247 on XP_808840 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 821
Score = 26.2 bits (56), Expect = 0.63, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 12/49 (24%)
Query: 70 YRSTISNSNFEEEMMVIAEKERKEMRRQRRKTGLSSQQKPKEEGIMTVK 118
YRS S +N +EE++ + EK++ E +KP G+++V+
Sbjct: 426 YRSGKSETNGKEELIALYEKKKAE------------GEKPPSPGMVSVR 462
>M.Javanica_Scaff6283g043247 on XP_813677 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 945
Score = 25.4 bits (54), Expect = 1.3, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 70 YRSTISNSNFEEEMMVIAEKERKE 93
YRS S +N +EE++ + EKE+ +
Sbjct: 437 YRSGESETNKKEELIALYEKEKSD 460
>M.Javanica_Scaff6283g043247 on XP_808550 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 948
Score = 25.4 bits (54), Expect = 1.4, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 70 YRSTISNSNFEEEMMVIAEKERKE 93
YRS S +N +EE++ + EKE+ +
Sbjct: 437 YRSGESETNKKEELIALYEKEKSD 460
>M.Javanica_Scaff6283g043247 on XP_816233 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 851
Score = 24.3 bits (51), Expect = 2.9, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Query: 52 VSSSSTTVPTTKMLQDSGYRSTISNSNFEEEMMVIAEKERK 92
VS V T+ +L Y+S SN N E+++ + EK++K
Sbjct: 427 VSEEDDDVTTSFLL----YKSAESNDNNGEKLIALYEKKKK 463
>M.Javanica_Scaff6283g043247 on XP_817615 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 860
Score = 24.3 bits (51), Expect = 2.9, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 67 DSGYRSTISNSNFEEEMMVIAEKERKEMRRQRRKTGLSSQ------QKPKEEGIMTVKNK 120
DS Y ++ N + + A+ ++ E + TG++S+ + PKE VK K
Sbjct: 155 DSLYAPSLVEMNGKLFAVAEAQLKKNEHEKTHFFTGIASELLVLSGENPKELAAANVKTK 214
Query: 121 IIILPPSQ 128
I+ PS+
Sbjct: 215 ILEKCPSE 222
>M.Javanica_Scaff6283g043247 on XP_813143 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 795
Score = 23.9 bits (50), Expect = 4.3, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 70 YRSTISNSNFEEEMMVIAEKERKE 93
YRS S +N +EE++ + EK+ E
Sbjct: 425 YRSGKSETNGKEELIALYEKKTAE 448
>M.Javanica_Scaff6283g043247 on XP_808213 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 819
Score = 23.9 bits (50), Expect = 4.5, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 70 YRSTISNSNFEEEMMVIAEKERKEMRRQRRKTGLSSQ-QKPKEEGIMTVKNKI 121
Y+S S +N +EE++ + EK++ E L++Q Q+ K+ ++ NK+
Sbjct: 429 YKSGKSETNGKEELIALYEKKKAEASLGMFSLRLTAQLQRVKD--VLATWNKV 479
>M.Javanica_Scaff6283g043247 on XP_811304 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 892
Score = 23.9 bits (50), Expect = 4.6, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 70 YRSTISNSNFEEEMMVIAEKERKE 93
YRS S +N +EE++ + EK+ E
Sbjct: 522 YRSGKSETNGKEELIALYEKKTAE 545
>M.Javanica_Scaff6283g043247 on XP_821293 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 786
Score = 23.1 bits (48), Expect = 6.5, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Query: 52 VSSSSTTVPTTKMLQDSGYRSTISNSNFEEEMMVIAEKER 91
VS + V + +L Y+S S +N +EE++ + EK++
Sbjct: 419 VSGEAVDVAASSLL----YKSAGSGNNGKEELIALYEKKK 454
>M.Javanica_Scaff6283g043247 on XP_821381 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 934
Score = 23.1 bits (48), Expect = 7.8, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 16/22 (72%)
Query: 70 YRSTISNSNFEEEMMVIAEKER 91
Y+S S N +EE++V+ EK++
Sbjct: 421 YKSAGSGDNKKEELIVLYEKKK 442
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6128g042571
(75 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_806774 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.2
XP_827747 VSG (Establishment) [Trypanosoma brucei] 22 7.6
>M.Javanica_Scaff6128g042571 on XP_806774 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 837
Score = 21.9 bits (45), Expect = 5.2, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 15/34 (44%)
Query: 7 YLVIKRADSASVLATIIVGTPQTSAAKRAAFRWR 40
+LV+ AT +V P + AK F WR
Sbjct: 50 FLVVMICCGTGGYATAVVTAPGSRNAKGTYFAWR 83
>M.Javanica_Scaff6128g042571 on XP_827747 VSG (Establishment) [Trypanosoma brucei]
Length = 509
Score = 21.6 bits (44), Expect = 7.6, Method: Composition-based stats.
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 58 FSDPNWSSKCTPDA 71
+DPNWS + + DA
Sbjct: 83 LADPNWSKQFSDDA 96
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff8201g051065
(69 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_808179 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 3.5
XP_819012 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 6.7
>M.Javanica_Scaff8201g051065 on XP_808179 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 942
Score = 22.3 bits (46), Expect = 3.5, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 27 SSPTSKKEANNGKNKNTGNKSNKSKITTIKPTTEE 61
S SKKE NGK K ++ + I I P +++
Sbjct: 383 SEEESKKETGNGKGKLHLWLTDNTHIVDIGPVSDD 417
>M.Javanica_Scaff8201g051065 on XP_819012 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 918
Score = 21.6 bits (44), Expect = 6.7, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 31 SKKEANNGKNKNTGNKSNKSKITTIKPTTEE 61
SKKE NGK K ++ + I I P +++
Sbjct: 384 SKKETGNGKGKLHLWLTDNTHIVDIGPVSDD 414
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7967g050171
(82 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349219 PfEMP1 (Establishment) [Plasmodium falciparum] 25 0.88
XP_001350082 Rh2b (Adhesin) [Plasmodium falciparum] 23 3.1
>M.Javanica_Scaff7967g050171 on XP_001349219 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2595
Score = 24.6 bits (52), Expect = 0.88, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 57 EYMEQKQKFEDYKRNALMANRGNE 80
E+ EQKQ++ K +A N GNE
Sbjct: 1319 EFEEQKQEYSKQKTDAEGNNNGNE 1342
>M.Javanica_Scaff7967g050171 on XP_001350082 Rh2b (Adhesin) [Plasmodium falciparum]
Length = 1115
Score = 23.1 bits (48), Expect = 3.1, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 31 ERQKDRRTETVRYRMQQTSQQYQNLAEYMEQKQ 63
E+Q+ + E + +Q QQ +N+ E EQK+
Sbjct: 624 EKQEQLQKEEELRKKEQEKQQQRNIQELEEQKK 656
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff8274g051374
(63 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_843745 VSG (Establishment) [Trypanosoma brucei] 24 0.65
AAK31233 variable surface protein 14g (Establishment) [Giardi... 23 1.0
XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum] 23 1.2
XP_001348165 RESA (Others) [plasmodium falciparum] 23 1.6
AAK49521 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum] 22 3.0
XP_001351319 PfEMP1 (Establishment) [Plasmodium falciparum] 22 4.2
XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum] 22 4.6
CAD92130 TashHN (Establishment) [Theileria annulata] 22 4.7
AAK31224 variable surface protein 7a (Establishment) [Giardia... 22 5.1
XP_001347288 PfEMP1 (Establishment) [Plasmodium falciparum] 22 5.7
XP_001349219 PfEMP1 (Establishment) [Plasmodium falciparum] 22 5.7
XP_843744 VSG (Establishment) [Trypanosoma brucei] 21 6.2
>M.Javanica_Scaff8274g051374 on XP_843745 VSG (Establishment) [Trypanosoma brucei]
Length = 366
Score = 23.9 bits (50), Expect = 0.65, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 26 ATISNNSGLSNGNQMFAMMQVIHLRNATALKLK 58
AT+S + L NGN+ + +I+L A K+K
Sbjct: 17 ATVSGSEWLVNGNEFKTLCGMINLAEAALGKMK 49
>M.Javanica_Scaff8274g051374 on AAK31233 variable surface protein 14g (Establishment) [Giardia
duodenalis]
Length = 126
Score = 23.5 bits (49), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Query: 3 KTPTQLIPPPPSINQTNIASSNFATIS 29
+TPT + P PS+N+T ++S A IS
Sbjct: 86 QTPT-VDPADPSVNKTGLSSGAIAGIS 111
>M.Javanica_Scaff8274g051374 on XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2238
Score = 23.5 bits (49), Expect = 1.2, Method: Composition-based stats.
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 3 KTPTQLIPPPPSINQTNIASSN 24
+TP + +PPPP+ + N
Sbjct: 1692 QTPEEKLPPPPAAKEEKPPKQN 1713
Score = 21.6 bits (44), Expect = 4.9, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 13 PSINQTNIASSNFATISNNSGLSNGNQMFA 42
PS N T AS N T S N+ ++GN A
Sbjct: 1857 PSGNNTT-ASGNNTTASGNNTTASGNNTTA 1885
>M.Javanica_Scaff8274g051374 on XP_001348165 RESA (Others) [plasmodium falciparum]
Length = 1085
Score = 23.1 bits (48), Expect = 1.6, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Query: 3 KTPTQLIPPPPSINQTNIASSN--FATISNNSGLSN 36
+ PT + PP I+ TNI N F T N SN
Sbjct: 116 EKPTFTLESPPDIDHTNILGFNEKFMTDVNRYRYSN 151
>M.Javanica_Scaff8274g051374 on AAK49521 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum]
Length = 1210
Score = 22.3 bits (46), Expect = 3.0, Method: Composition-based stats.
Identities = 8/25 (32%), Positives = 18/25 (72%)
Query: 14 SINQTNIASSNFATISNNSGLSNGN 38
++N+ + AS+ ++SN S ++NG+
Sbjct: 838 NVNEVHDASNTQGSVSNTSDITNGH 862
>M.Javanica_Scaff8274g051374 on XP_001351319 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2646
Score = 21.9 bits (45), Expect = 4.2, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 13 PSINQTNIASSNFATISNNSGLSNGNQMFA 42
PS N T AS N T S N+ ++GN A
Sbjct: 2289 PSGNNTT-ASGNNTTASGNNTTASGNNTTA 2317
>M.Javanica_Scaff8274g051374 on XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2264
Score = 21.9 bits (45), Expect = 4.6, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 13 PSINQTNIASSNFATISNNSGLSNGNQMFA 42
PS N T AS N T S N+ ++GN A
Sbjct: 1894 PSGNNTT-ASGNNTTASGNNTTASGNNTTA 1922
>M.Javanica_Scaff8274g051374 on CAD92130 TashHN (Establishment) [Theileria annulata]
Length = 332
Score = 21.6 bits (44), Expect = 4.7, Method: Composition-based stats.
Identities = 10/18 (55%), Positives = 10/18 (55%)
Query: 2 PKTPTQLIPPPPSINQTN 19
PKT IPP PS Q N
Sbjct: 145 PKTEYYPIPPIPSTRQRN 162
>M.Javanica_Scaff8274g051374 on AAK31224 variable surface protein 7a (Establishment) [Giardia
duodenalis]
Length = 127
Score = 21.6 bits (44), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 10 PPPPSINQTNIASSNFATIS 29
P PS+N+T ++S A IS
Sbjct: 93 PTDPSVNKTGLSSGAIAGIS 112
>M.Javanica_Scaff8274g051374 on XP_001347288 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2241
Score = 21.6 bits (44), Expect = 5.7, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 13 PSINQTNIASSNFATISNNSGLSNGNQMFA 42
PS N T AS N T S N+ ++GN A
Sbjct: 1900 PSGNNTT-ASGNNTTASGNNTTASGNNTTA 1928
>M.Javanica_Scaff8274g051374 on XP_001349219 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2595
Score = 21.6 bits (44), Expect = 5.7, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 13 PSINQTNIASSNFATISNNSGLSNGNQMFA 42
PS N T AS N T S N+ ++GN A
Sbjct: 2213 PSGNNTT-ASGNNTTASGNNTTASGNNTTA 2241
>M.Javanica_Scaff8274g051374 on XP_843744 VSG (Establishment) [Trypanosoma brucei]
Length = 366
Score = 21.2 bits (43), Expect = 6.2, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 26 ATISNNSGLSNGNQMFAMMQVIHLRNATALKLK 58
AT+S + + NG++ + +I+L A K+K
Sbjct: 17 ATVSGDRRIVNGDEFKTLCGMINLAEAALGKMK 49
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2538g023592
(323 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609754 variant erythrocyte surface antigen-1, alpha subun... 30 0.14
ABB59609 CSP (Invasion) [Plasmodium falciparum] 25 2.4
XP_001611206 variant erythrocyte surface antigen-1, alpha subun... 26 3.1
ABB59593 CSP (Invasion) [Plasmodium falciparum] 24 4.7
XP_805548 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 5.5
ABB59596 CSP (Invasion) [Plasmodium falciparum] 23 5.9
ABB59608 CSP (Invasion) [Plasmodium falciparum] 23 6.4
ABB59597 CSP (Invasion) [Plasmodium falciparum] 23 6.6
XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum] 25 6.7
ABB59599 CSP (Invasion) [Plasmodium falciparum] 23 7.2
ABB59604 CSP (Invasion) [Plasmodium falciparum] 23 7.4
AAT99615 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 25 7.6
AAT99622 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 25 7.7
ABB59603 CSP (Invasion) [Plasmodium falciparum] 23 7.7
AAT99618 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 25 7.7
AAT99620 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 25 7.7
AAS46308 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 25 8.0
AAT99621 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 25 8.0
AAS46326 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 25 8.0
AAS46309 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 25 8.1
AAS46311 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 25 8.1
AAS46325 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 25 8.2
AAS46314 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 25 8.3
AAS46315 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 25 8.4
AAS46317 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 25 8.4
ABB59611 CSP (Invasion) [Plasmodium falciparum] 23 8.5
AAS46313 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 25 8.6
AAS46316 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 25 8.6
AAS46318 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 25 8.6
AAS46321 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 25 8.6
AAS46319 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 25 8.8
AAS46324 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 25 8.8
AAS46323 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 25 8.9
BAC44837 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 25 9.9
XP_001347629 MSP3 (Invasion) [Plasmodium falciparum] 24 9.9
>M.Javanica_Scaff2538g023592 on XP_001609754 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1295
Score = 30.4 bits (67), Expect = 0.14, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
Query: 186 LEKQKVEYPKELKSRIIEIGNKIRVIME--KKKRDCFNCGVKEIKNNWHKYLKE-QYLCN 242
L+K K +Y K RI E+ NK+R ++ +K N + K+ + K +K+ + +CN
Sbjct: 766 LQKWKKDY-SSAKDRISEVINKVRDVLTVLEKGLPQVNGQLNGHKDEFTKAIKKLEDICN 824
Query: 243 N-----CYDYIKTCGRH 254
+ C D+I CGR
Sbjct: 825 SPKCPPCNDHINKCGRQ 841
>M.Javanica_Scaff2538g023592 on ABB59609 CSP (Invasion) [Plasmodium falciparum]
Length = 77
Score = 24.6 bits (52), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 10/55 (18%)
Query: 60 KTNNRYDGFNKNIEVYLRSIDLNLDK----------NMFEVEISDRSKYIPSDQL 104
K NN + +K+IE YLR+I +L N +V I S P DQL
Sbjct: 1 KNNNNEEPSDKHIEQYLRNIQNSLSTEWSPCSVTCGNGIQVRIKPGSADKPKDQL 55
>M.Javanica_Scaff2538g023592 on XP_001611206 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1285
Score = 26.2 bits (56), Expect = 3.1, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 7/51 (13%)
Query: 182 KIELLEKQKVEYPKELKSRIIEIGNKI------RVIMEKKKRDCFNCGVKE 226
K++ LE +K E KE+K ++ IGN + + +E K ++ N VKE
Sbjct: 637 KVKALEGEKTEGIKEVKDVLVTIGNVVVQLGNAQEALEGKDKEAIN-AVKE 686
>M.Javanica_Scaff2538g023592 on ABB59593 CSP (Invasion) [Plasmodium falciparum]
Length = 77
Score = 23.9 bits (50), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 10/55 (18%)
Query: 60 KTNNRYDGFNKNIEVYLRSIDLNLDK----------NMFEVEISDRSKYIPSDQL 104
K NN + +K+IE YL+ I +L N +V I S P DQL
Sbjct: 1 KNNNNEEPSDKHIEQYLKKIQYSLSTEWSPCSVTCGNGIQVRIKPGSADKPKDQL 55
>M.Javanica_Scaff2538g023592 on XP_805548 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1044
Score = 25.4 bits (54), Expect = 5.5, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 137 ENNNCYETSILFKSGNNFSSVEENIENYINKLLSSYWTKINLIGYKI-ELLEKQK--VEY 193
EN++ +S+L KSG N + EE I Y NK K NL+ ++ E LE+ K V+
Sbjct: 410 ENDDAAASSLLMKSGKN--NNEELISLYENKNSDG---KYNLVAVRLTEKLERIKKVVKT 464
Query: 194 PKELKSRI 201
K+L S +
Sbjct: 465 WKDLDSAL 472
>M.Javanica_Scaff2538g023592 on ABB59596 CSP (Invasion) [Plasmodium falciparum]
Length = 77
Score = 23.5 bits (49), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 10/55 (18%)
Query: 60 KTNNRYDGFNKNIEVYLRSIDLNLDK----------NMFEVEISDRSKYIPSDQL 104
K NN + +K+IE YL++I +L N +V I S P DQL
Sbjct: 1 KNNNNEEPSDKHIEQYLKNIQNSLSTEWSPCSVTCGNGIQVRIKPGSANKPKDQL 55
>M.Javanica_Scaff2538g023592 on ABB59608 CSP (Invasion) [Plasmodium falciparum]
Length = 77
Score = 23.5 bits (49), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 10/55 (18%)
Query: 60 KTNNRYDGFNKNIEVYLRSIDLNLDK----------NMFEVEISDRSKYIPSDQL 104
K NN + +K+IE YLR+I +L N +V I S P D+L
Sbjct: 1 KNNNNEEPSDKHIEQYLRNIQNSLSTEWSPCSVTCGNGIQVRIKPGSANKPKDEL 55
>M.Javanica_Scaff2538g023592 on ABB59597 CSP (Invasion) [Plasmodium falciparum]
Length = 77
Score = 23.5 bits (49), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 10/55 (18%)
Query: 60 KTNNRYDGFNKNIEVYLRSIDLNLDK----------NMFEVEISDRSKYIPSDQL 104
K NN + +K+IE YL+ I +L N +V I S P DQL
Sbjct: 1 KNNNNEEPSDKHIEQYLKEIQNSLSTEWSPCSVTCGNGIQVRIKPGSANKPKDQL 55
>M.Javanica_Scaff2538g023592 on XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3954
Score = 25.0 bits (53), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 101 SDQLKKKILIEISNNEIINNFLPGFEKMVLRNNNFIENNNCYETSILFKSGNNFSSVEE 159
D+ K+K E + N+I L EK+ E Y S++ SGNN +++E+
Sbjct: 1475 GDKEKRKKFWETNKNDIWQGMLCALEKIANNKKTLTET---YNYSLVKFSGNNSTTLED 1530
>M.Javanica_Scaff2538g023592 on ABB59599 CSP (Invasion) [Plasmodium falciparum]
Length = 77
Score = 23.5 bits (49), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 10/55 (18%)
Query: 60 KTNNRYDGFNKNIEVYLRSIDLNLDK----------NMFEVEISDRSKYIPSDQL 104
K NN + +K+IE YL+ I +L N +V I S P DQL
Sbjct: 1 KNNNNEEPSDKHIEQYLKKIQNSLSTEWSPCSVTCGNGIQVRIKPGSANKPKDQL 55
>M.Javanica_Scaff2538g023592 on ABB59604 CSP (Invasion) [Plasmodium falciparum]
Length = 77
Score = 23.5 bits (49), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 10/55 (18%)
Query: 60 KTNNRYDGFNKNIEVYLRSIDLNLDK----------NMFEVEISDRSKYIPSDQL 104
K NN + +K+IE YL++I +L N +V I S P DQL
Sbjct: 1 KNNNNEEPSDKHIEQYLKNIQNSLSTEWSPCSVTCGNGIQVRIKPGSADKPKDQL 55
>M.Javanica_Scaff2538g023592 on AAT99615 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 620
Score = 25.0 bits (53), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 150 SGNNFSSV--EENIENYINKLLSSYWTKINLIGYKIELLEKQKVEYPKELKSRIIEIGNK 207
+GNN S+ ++ +N + +YWT + Y+I Q V+Y K+ K +
Sbjct: 516 TGNNGKSLCQDKTCQNVCTNM--NYWTYTRKLAYEI-----QSVKYDKDRKLFSLAKDKN 568
Query: 208 IRVIMEKKKRDCFNCGVKEIKNNWHKYLKEQYLC 241
+ +++ ++C N +I + K KE+ C
Sbjct: 569 VTTFLKENAKNCSNIDFTKIFDQLDKLFKERCSC 602
>M.Javanica_Scaff2538g023592 on AAT99622 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 620
Score = 25.0 bits (53), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 150 SGNNFSSV--EENIENYINKLLSSYWTKINLIGYKIELLEKQKVEYPKELKSRIIEIGNK 207
+GNN S+ ++ +N + +YWT + Y+I Q V+Y K+ K +
Sbjct: 516 TGNNGKSLCQDKTCQNVCTNM--NYWTYTRKLAYEI-----QSVKYDKDRKLFSLAKDKN 568
Query: 208 IRVIMEKKKRDCFNCGVKEIKNNWHKYLKEQYLC 241
+ +++ ++C N +I + K KE+ C
Sbjct: 569 VTTFLKENAKNCSNIDFTKIFDQLDKLFKERCSC 602
>M.Javanica_Scaff2538g023592 on ABB59603 CSP (Invasion) [Plasmodium falciparum]
Length = 77
Score = 23.5 bits (49), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 10/55 (18%)
Query: 60 KTNNRYDGFNKNIEVYLRSIDLNLDK----------NMFEVEISDRSKYIPSDQL 104
K NN + +K+IE YL+ I +L N +V I S P DQL
Sbjct: 1 KNNNNEEPSDKHIEKYLKEIQNSLSTEWSPCSVTCGNGIQVRIKPGSANKPKDQL 55
>M.Javanica_Scaff2538g023592 on AAT99618 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 620
Score = 25.0 bits (53), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 150 SGNNFSSV--EENIENYINKLLSSYWTKINLIGYKIELLEKQKVEYPKELKSRIIEIGNK 207
+GNN S+ ++ +N + +YWT + Y+I Q V+Y K+ K +
Sbjct: 516 TGNNGKSLCQDKTCQNVCTNM--NYWTYTRKLAYEI-----QSVKYDKDRKLFSLAKDKN 568
Query: 208 IRVIMEKKKRDCFNCGVKEIKNNWHKYLKEQYLC 241
+ +++ ++C N +I + K KE+ C
Sbjct: 569 VTTFLKENAKNCSNIDFTKIFDQLDKLFKERCSC 602
>M.Javanica_Scaff2538g023592 on AAT99620 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 620
Score = 25.0 bits (53), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 150 SGNNFSSV--EENIENYINKLLSSYWTKINLIGYKIELLEKQKVEYPKELKSRIIEIGNK 207
+GNN S+ ++ +N + +YWT + Y+I Q V+Y K+ K +
Sbjct: 516 TGNNGKSLCQDKTCQNVCTNM--NYWTYTRKLAYEI-----QSVKYDKDRKLFSLAKDKN 568
Query: 208 IRVIMEKKKRDCFNCGVKEIKNNWHKYLKEQYLC 241
+ +++ ++C N +I + K KE+ C
Sbjct: 569 VTTFLKENAKNCSNIDFTKIFDQLDKLFKERCSC 602
>M.Javanica_Scaff2538g023592 on AAS46308 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 657
Score = 25.0 bits (53), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 150 SGNNFSSV--EENIENYINKLLSSYWTKINLIGYKIELLEKQKVEYPKELKSRIIEIGNK 207
+GNN S+ ++ +N + +YWT + Y+I Q V+Y K+ K +
Sbjct: 547 TGNNGKSLCQDKTCQNVCTNM--NYWTYTRKLAYEI-----QSVKYDKDRKLFSLAKDKN 599
Query: 208 IRVIMEKKKRDCFNCGVKEIKNNWHKYLKEQYLC 241
+ +++ ++C N +I + K KE+ C
Sbjct: 600 VTTFLKENAKNCSNIDFTKIFDQLDKLFKERCSC 633
>M.Javanica_Scaff2538g023592 on AAT99621 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 620
Score = 24.6 bits (52), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 150 SGNNFSSV--EENIENYINKLLSSYWTKINLIGYKIELLEKQKVEYPKELKSRIIEIGNK 207
+GNN S+ ++ +N + +YWT + Y+I Q V+Y K+ K +
Sbjct: 516 TGNNGKSLCQDKTCQNVCTNM--NYWTYTRKLAYEI-----QSVKYDKDRKLFSLAKDKN 568
Query: 208 IRVIMEKKKRDCFNCGVKEIKNNWHKYLKEQYLC 241
+ +++ ++C N +I + K KE+ C
Sbjct: 569 VTTFLKENAKNCSNIDFTKIFDQLDKLFKERCSC 602
>M.Javanica_Scaff2538g023592 on AAS46326 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 672
Score = 25.0 bits (53), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 150 SGNNFSSV--EENIENYINKLLSSYWTKINLIGYKIELLEKQKVEYPKELKSRIIEIGNK 207
+GNN S+ ++ +N + +YWT + Y+I Q V+Y K+ K +
Sbjct: 547 TGNNGKSLCQDKTCQNVCTNM--NYWTYTRKLAYEI-----QSVKYDKDRKLFSLAKDKN 599
Query: 208 IRVIMEKKKRDCFNCGVKEIKNNWHKYLKEQYLC 241
+ +++ ++C N +I + K KE+ C
Sbjct: 600 VTTFLKENAKNCSNIDFTKIFDQLDKLFKERCSC 633
>M.Javanica_Scaff2538g023592 on AAS46309 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 663
Score = 24.6 bits (52), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 150 SGNNFSSV--EENIENYINKLLSSYWTKINLIGYKIELLEKQKVEYPKELKSRIIEIGNK 207
+GNN S+ ++ +N + +YWT + Y+I Q V+Y K+ K +
Sbjct: 542 TGNNGKSLCQDKTCQNVCTNM--NYWTYTRKLAYEI-----QSVKYDKDRKLFSLAKDKN 594
Query: 208 IRVIMEKKKRDCFNCGVKEIKNNWHKYLKEQYLC 241
+ +++ ++C N +I + K KE+ C
Sbjct: 595 VTTFLKENAKNCSNIDFTKIFDQLDKLFKERCSC 628
>M.Javanica_Scaff2538g023592 on AAS46311 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 668
Score = 24.6 bits (52), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 150 SGNNFSSV--EENIENYINKLLSSYWTKINLIGYKIELLEKQKVEYPKELKSRIIEIGNK 207
+GNN S+ ++ +N + +YWT + Y+I Q V+Y K+ K +
Sbjct: 547 TGNNGKSLCQDKTCQNVCTNM--NYWTYTRKLAYEI-----QSVKYDKDRKLFSLAKDKN 599
Query: 208 IRVIMEKKKRDCFNCGVKEIKNNWHKYLKEQYLC 241
+ +++ ++C N +I + K KE+ C
Sbjct: 600 VTTFLKENAKNCSNIDFTKIFDQLDKLFKERCSC 633
>M.Javanica_Scaff2538g023592 on AAS46325 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 668
Score = 24.6 bits (52), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 150 SGNNFSSV--EENIENYINKLLSSYWTKINLIGYKIELLEKQKVEYPKELKSRIIEIGNK 207
+GNN S+ ++ +N + +YWT + Y+I Q V+Y K+ K +
Sbjct: 547 TGNNGKSLCQDKTCQNVCTNM--NYWTYTRKLAYEI-----QSVKYDKDRKLFSLAKDKN 599
Query: 208 IRVIMEKKKRDCFNCGVKEIKNNWHKYLKEQYLC 241
+ +++ ++C N +I + K KE+ C
Sbjct: 600 VTTFLKENAKNCSNIDFTKIFDQLDKLFKERCSC 633
>M.Javanica_Scaff2538g023592 on AAS46314 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 662
Score = 24.6 bits (52), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 150 SGNNFSSV--EENIENYINKLLSSYWTKINLIGYKIELLEKQKVEYPKELKSRIIEIGNK 207
+GNN S+ ++ +N + +YWT + Y+I Q V+Y K+ K +
Sbjct: 541 TGNNGKSLCQDKTCQNVCTNM--NYWTYTRKLAYEI-----QSVKYDKDRKLFSLAKDKN 593
Query: 208 IRVIMEKKKRDCFNCGVKEIKNNWHKYLKEQYLC 241
+ +++ ++C N +I + K KE+ C
Sbjct: 594 VTTFLKENAKNCSNIDFTKIFDQLDKLFKERCSC 627
>M.Javanica_Scaff2538g023592 on AAS46315 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 671
Score = 24.6 bits (52), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 150 SGNNFSSV--EENIENYINKLLSSYWTKINLIGYKIELLEKQKVEYPKELKSRIIEIGNK 207
+GNN S+ ++ +N + +YWT + Y+I Q V+Y K+ K +
Sbjct: 547 TGNNGKSLCQDKTCQNVCTNM--NYWTYTRKLAYEI-----QSVKYDKDRKLFSLAKDKN 599
Query: 208 IRVIMEKKKRDCFNCGVKEIKNNWHKYLKEQYLC 241
+ +++ ++C N +I + K KE+ C
Sbjct: 600 VTTFLKENAKNCSNIDFTKIFDQLDKLFKERCSC 633
>M.Javanica_Scaff2538g023592 on AAS46317 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 672
Score = 24.6 bits (52), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 150 SGNNFSSV--EENIENYINKLLSSYWTKINLIGYKIELLEKQKVEYPKELKSRIIEIGNK 207
+GNN S+ ++ +N + +YWT + Y+I Q V+Y K+ K +
Sbjct: 547 TGNNGKSLCQDKTCQNVCTNM--NYWTYTRKLAYEI-----QSVKYDKDRKLFSLAKDKN 599
Query: 208 IRVIMEKKKRDCFNCGVKEIKNNWHKYLKEQYLC 241
+ +++ ++C N +I + K KE+ C
Sbjct: 600 VTTFLKENAKNCSNIDFTKIFDQLDKLFKERCSC 633
>M.Javanica_Scaff2538g023592 on ABB59611 CSP (Invasion) [Plasmodium falciparum]
Length = 77
Score = 23.1 bits (48), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 10/55 (18%)
Query: 60 KTNNRYDGFNKNIEVYLRSIDLNLDK----------NMFEVEISDRSKYIPSDQL 104
K NN + +K+IE YL+ I +L N +V I S P DQL
Sbjct: 1 KNNNNEEPSDKHIEQYLKKIQNSLSTEWSPCSVTCGNGIQVRIKPGSADKPKDQL 55
>M.Javanica_Scaff2538g023592 on AAS46313 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 662
Score = 24.6 bits (52), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 150 SGNNFSSV--EENIENYINKLLSSYWTKINLIGYKIELLEKQKVEYPKELKSRIIEIGNK 207
+GNN S+ ++ +N + +YWT + Y+I Q V+Y K+ K +
Sbjct: 541 TGNNGKSLCQDKTCQNVCTNM--NYWTYTRKLAYEI-----QSVKYDKDRKLFSLAKDKN 593
Query: 208 IRVIMEKKKRDCFNCGVKEIKNNWHKYLKEQYLC 241
+ +++ ++C N +I + K KE+ C
Sbjct: 594 VTTFLKENAKNCSNIDFTKIFDQLDKLFKERCSC 627
>M.Javanica_Scaff2538g023592 on AAS46316 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 671
Score = 24.6 bits (52), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 150 SGNNFSSV--EENIENYINKLLSSYWTKINLIGYKIELLEKQKVEYPKELKSRIIEIGNK 207
+GNN S+ ++ +N + +YWT + Y+I Q V+Y K+ K +
Sbjct: 547 TGNNGKSLCQDKTCQNVCTNM--NYWTYTRKLAYEI-----QSVKYDKDRKLFSLAKDKN 599
Query: 208 IRVIMEKKKRDCFNCGVKEIKNNWHKYLKEQYLC 241
+ +++ ++C N +I + K KE+ C
Sbjct: 600 VTTFLKENAKNCSNIDFTKIFDQLDKLFKERCSC 633
>M.Javanica_Scaff2538g023592 on AAS46318 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 672
Score = 24.6 bits (52), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 150 SGNNFSSV--EENIENYINKLLSSYWTKINLIGYKIELLEKQKVEYPKELKSRIIEIGNK 207
+GNN S+ ++ +N + +YWT + Y+I Q V+Y K+ K +
Sbjct: 547 TGNNGKSLCQDKTCQNVCTNM--NYWTYTRKLAYEI-----QSVKYDKDRKLFSLAKDKN 599
Query: 208 IRVIMEKKKRDCFNCGVKEIKNNWHKYLKEQYLC 241
+ +++ ++C N +I + K KE+ C
Sbjct: 600 VTTFLKENAKNCSNIDFTKIFDQLDKLFKERCSC 633
>M.Javanica_Scaff2538g023592 on AAS46321 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 673
Score = 24.6 bits (52), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 150 SGNNFSSV--EENIENYINKLLSSYWTKINLIGYKIELLEKQKVEYPKELKSRIIEIGNK 207
+GNN S+ ++ +N + +YWT + Y+I Q V+Y K+ K +
Sbjct: 547 TGNNGKSLCQDKTCQNVCTNM--NYWTYTRKLAYEI-----QSVKYDKDRKLFSLAKDKN 599
Query: 208 IRVIMEKKKRDCFNCGVKEIKNNWHKYLKEQYLC 241
+ +++ ++C N +I + K KE+ C
Sbjct: 600 VTTFLKENAKNCSNIDFTKIFDQLDKLFKERCSC 633
>M.Javanica_Scaff2538g023592 on AAS46319 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 673
Score = 24.6 bits (52), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 150 SGNNFSSV--EENIENYINKLLSSYWTKINLIGYKIELLEKQKVEYPKELKSRIIEIGNK 207
+GNN S+ ++ +N + +YWT + Y+I Q V+Y K+ K +
Sbjct: 547 TGNNGKSLCQDKTCQNVCTNM--NYWTYTRKLAYEI-----QSVKYDKDRKLFSLAKDKN 599
Query: 208 IRVIMEKKKRDCFNCGVKEIKNNWHKYLKEQYLC 241
+ +++ ++C N +I + K KE+ C
Sbjct: 600 VTTFLKENAKNCSNIDFTKIFDQLDKLFKERCSC 633
>M.Javanica_Scaff2538g023592 on AAS46324 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 673
Score = 24.6 bits (52), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 150 SGNNFSSV--EENIENYINKLLSSYWTKINLIGYKIELLEKQKVEYPKELKSRIIEIGNK 207
+GNN S+ ++ +N + +YWT + Y+I Q V+Y K+ K +
Sbjct: 547 TGNNGKSLCQDKTCQNVCTNM--NYWTYTRKLAYEI-----QSVKYDKDRKLFSLAKDKN 599
Query: 208 IRVIMEKKKRDCFNCGVKEIKNNWHKYLKEQYLC 241
+ +++ ++C N +I + K KE+ C
Sbjct: 600 VTTFLKENAKNCSNIDFTKIFDQLDKLFKERCSC 633
>M.Javanica_Scaff2538g023592 on AAS46323 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 673
Score = 24.6 bits (52), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 150 SGNNFSSV--EENIENYINKLLSSYWTKINLIGYKIELLEKQKVEYPKELKSRIIEIGNK 207
+GNN S+ ++ +N + +YWT + Y+I Q V+Y K+ K +
Sbjct: 547 TGNNGKSLCQDKTCQNVCTNM--NYWTYTRKLAYEI-----QSVKYDKDRKLFSLAKDKN 599
Query: 208 IRVIMEKKKRDCFNCGVKEIKNNWHKYLKEQYLC 241
+ +++ ++C N +I + K KE+ C
Sbjct: 600 VTTFLKENAKNCSNIDFTKIFDQLDKLFKERCSC 633
>M.Javanica_Scaff2538g023592 on BAC44837 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 1566
Score = 24.6 bits (52), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Query: 172 YWTKINLIGYKIELLEKQKVEYPKELKSRIIEIGNKIRVIMEKKKRDCFNCGVKEIKNNW 231
YWT + Y+I Q V+Y K+ K + + +++ ++C N +I +
Sbjct: 662 YWTYTRKLAYEI-----QSVKYDKDRKLFSLAKDKNVTTFLKENAKNCSNIDFTKIFDQL 716
Query: 232 HKYLKEQYLC 241
K KE+ C
Sbjct: 717 DKLFKERCSC 726
>M.Javanica_Scaff2538g023592 on XP_001347629 MSP3 (Invasion) [Plasmodium falciparum]
Length = 354
Score = 24.3 bits (51), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 112 ISNNEIINNFLPGFEKMVLRNNNFIENNNCYETSILFKSGNNFSSVE 158
+++ EI+ + +L NN+ IEN T+I +GN+FS E
Sbjct: 23 VASKEIVKKYNLNLRNAILNNNSQIENEENVNTTI---TGNDFSGGE 66
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6028g042122
(245 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAC37226 SBP1 (Others) [Babesia bovis] 25 4.5
XP_804817 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 7.7
XP_001611736 variant erythrocyte surface antigen-1, alpha subun... 24 8.8
>M.Javanica_Scaff6028g042122 on AAC37226 SBP1 (Others) [Babesia bovis]
Length = 596
Score = 25.0 bits (53), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 5/38 (13%)
Query: 99 GYGENLYANSWAMDNLTEAMLGAANGWW---GEKDVCP 133
+ N++AN + + + G+ NGWW GE DV P
Sbjct: 29 AFSGNVWANEAEVSQVVKP--GSVNGWWFTKGEYDVDP 64
>M.Javanica_Scaff6028g042122 on XP_804817 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 769
Score = 24.3 bits (51), Expect = 7.7, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 127 GEKDVCPINENNLKVTDKVFDKCGHWVPMAWSHTT 161
GE+ V N+ L+ D F CG P SH T
Sbjct: 661 GEEGVLFTNKTPLEFVDLCFGVCGEENPSQESHVT 695
>M.Javanica_Scaff6028g042122 on XP_001611736 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1365
Score = 24.3 bits (51), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 20/73 (27%)
Query: 110 AMDNLTEAMLGAANGWW----GEKDVCPINENNLKVTDKVFDKCGHWVPMAWSHTTEIFC 165
A+ T +LG G++ GEK+ I + N KC H P+A + FC
Sbjct: 991 ALSATTPQVLGDVFGFFRGGVGEKEQGMIKDQN--------KKCDHSKPVAEKRDEDYFC 1042
Query: 166 GVQLCPPQFWCSN 178
G WC++
Sbjct: 1043 G--------WCAS 1047
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6004g042031
(289 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_802392 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.23
XP_807448 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.39
XP_805548 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.52
XP_818382 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.52
XP_817333 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.59
XP_815318 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.62
XP_811242 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.73
XP_817494 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.76
XP_804686 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.85
XP_808156 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.93
XP_804105 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.1
XP_802455 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.8
XP_815706 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.9
XP_815707 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.9
XP_815188 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.7
XP_805733 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 3.0
XP_820181 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 3.4
XP_820062 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 3.8
XP_803347 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 5.7
XP_815493 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 7.0
>M.Javanica_Scaff6004g042031 on XP_802392 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 531
Score = 29.6 bits (65), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 199 VATAIIHETPNKTTDTTKVFTAINDTTSTIL 229
VAT IHE P + + + +NDT+ST+L
Sbjct: 187 VATVSIHEVPQSGSPISLMGVRMNDTSSTVL 217
>M.Javanica_Scaff6004g042031 on XP_807448 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 831
Score = 28.9 bits (63), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 191 TNNGDTKSVATAIIHETPNKTTDTTKVFTA-INDTTSTIL 229
TNN T S AT +IHE P + + A +NDT ST+L
Sbjct: 533 TNNKFTLS-ATVVIHEVPEAGSSPVPLIGARLNDTASTVL 571
>M.Javanica_Scaff6004g042031 on XP_805548 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1044
Score = 28.5 bits (62), Expect = 0.52, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 193 NGDTKSVATAIIHETPNKTTDTTKVFTAINDTTSTIL 229
N + VAT IHE P + + +NDT+ST+L
Sbjct: 561 NNEFTLVATVSIHEVPQSGSPIPLIGVRMNDTSSTVL 597
>M.Javanica_Scaff6004g042031 on XP_818382 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 890
Score = 28.5 bits (62), Expect = 0.52, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 47/124 (37%), Gaps = 7/124 (5%)
Query: 107 SEETENNNKNEGFDLINSLIDLNEGNLTTDDSPSDLTMLDAEFGNNGGENNLNDEDSGNE 166
+E +N + + L+ GN SD T D FG N +N + +
Sbjct: 455 AERASTDNACGAVKITDGLVGFLSGNF------SDGTWRDEYFGVNATVSNKEGAEQVDS 508
Query: 167 GLQIIEDAESAENLV-EQQQPINNNTNNGDTKSVATAIIHETPNKTTDTTKVFTAINDTT 225
G++ AE V Q + + N + +AT IHE P T + + + D
Sbjct: 509 GVKFTSRGAGAEWPVGSQGENQLYHFANHNFTLLATVSIHEVPEGDTPISVIGMKMKDNG 568
Query: 226 STIL 229
T+L
Sbjct: 569 KTVL 572
>M.Javanica_Scaff6004g042031 on XP_817333 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1037
Score = 28.5 bits (62), Expect = 0.59, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 193 NGDTKSVATAIIHETPNKTTDTTKVFTAINDTTSTIL 229
N + VAT IHE P + V +NDT ST+L
Sbjct: 557 NTEFTLVATVSIHEVPQSGSSIPLVGVRMNDTDSTVL 593
>M.Javanica_Scaff6004g042031 on XP_815318 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 587
Score = 28.1 bits (61), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 199 VATAIIHETPNKTTDTTKVFTAINDTTSTIL 229
VAT IHE P + + +NDT+ST+L
Sbjct: 102 VATVSIHEVPQSGSTVPLMGVRMNDTSSTVL 132
>M.Javanica_Scaff6004g042031 on XP_811242 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 909
Score = 28.1 bits (61), Expect = 0.73, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 191 TNNGDTKSVATAIIHETPNKTTDTTKVFTA-INDTTSTIL 229
TNN T S AT IHE P + + A +NDT ST+L
Sbjct: 577 TNNDFTLS-ATVTIHEVPEAGSSPISLIGARLNDTASTVL 615
>M.Javanica_Scaff6004g042031 on XP_817494 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 368
Score = 27.7 bits (60), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 191 TNNGDTKSVATAIIHETPNKTTDTTKVFTA-INDTTSTIL 229
TNN T S AT +IHE P + + A +NDT ST+L
Sbjct: 70 TNNKFTLS-ATVVIHEVPEAGSSPIPLIGARLNDTASTVL 108
>M.Javanica_Scaff6004g042031 on XP_804686 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1045
Score = 27.7 bits (60), Expect = 0.85, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 199 VATAIIHETPNKTTDTTKVFTAINDTTSTIL 229
VAT IHE P + + +NDT+ST+L
Sbjct: 568 VATVSIHEVPQDGSPVPLIGVRMNDTSSTVL 598
>M.Javanica_Scaff6004g042031 on XP_808156 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1058
Score = 27.7 bits (60), Expect = 0.93, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 199 VATAIIHETPNKTTDTTKVFTAINDTTSTIL 229
VAT IHE P + + +NDT+ST+L
Sbjct: 576 VATVSIHEVPQSGSTVPLMGVRMNDTSSTVL 606
>M.Javanica_Scaff6004g042031 on XP_804105 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1017
Score = 27.3 bits (59), Expect = 1.1, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 193 NGDTKSVATAIIHETPNKTTDTTKVFTA-INDTTSTIL 229
N + VAT IHE P + + A +NDT+ST+L
Sbjct: 556 NNEFTLVATVSIHEVPQSGSSPIPLIGARMNDTSSTVL 593
>M.Javanica_Scaff6004g042031 on XP_802455 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 356
Score = 26.6 bits (57), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 39/99 (39%), Gaps = 18/99 (18%)
Query: 199 VATAIIHETPNKTTDTTKVFTAINDTTSTILEDT--TEDDSLLLGKMVVCTH---RILKS 253
V A+IH+ P K T + ++D T+L T D G+ + H R + S
Sbjct: 154 VVMAVIHDRPKKRTPIPLIRVVMDDEDKTVLFGVFYTHD-----GRWMTVIHGGGRQILS 208
Query: 254 EGMDCE-----AIGLEKSVYDLLINYKQMRAEYAKKIKG 287
G D E + + +DL IN R Y KG
Sbjct: 209 TGWDPEKPCQVVLRHDTGHWDLYIN---ARVAYFGTYKG 244
>M.Javanica_Scaff6004g042031 on XP_815706 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 907
Score = 26.6 bits (57), Expect = 1.9, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 30/63 (47%)
Query: 135 TDDSPSDLTMLDAEFGNNGGENNLNDEDSGNEGLQIIEDAESAENLVEQQQPINNNTNNG 194
T D P+ +T DA + G ++ + + G EG +++ + A+ V N T+N
Sbjct: 790 TADQPASVTSSDAASTDVGASSSDDAQTVGTEGGDMMQADQPAQFSVGTPDAANAATHNA 849
Query: 195 DTK 197
+ K
Sbjct: 850 EGK 852
>M.Javanica_Scaff6004g042031 on XP_815707 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 907
Score = 26.6 bits (57), Expect = 1.9, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 30/63 (47%)
Query: 135 TDDSPSDLTMLDAEFGNNGGENNLNDEDSGNEGLQIIEDAESAENLVEQQQPINNNTNNG 194
T D P+ +T DA + G ++ + + G EG +++ + A+ V N T+N
Sbjct: 790 TADQPASVTSSDAASTDVGASSSDDAQTVGTEGGDMMQADQPAQFSVGTPDAANAATHNA 849
Query: 195 DTK 197
+ K
Sbjct: 850 EGK 852
>M.Javanica_Scaff6004g042031 on XP_815188 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 862
Score = 26.2 bits (56), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 59/140 (42%), Gaps = 20/140 (14%)
Query: 123 NSLIDLNEGNLTTDDSPSDLTMLDAEFGNNGGENNLNDEDS--------GNEGLQIIEDA 174
NS +L E TTD S + ++ E G G + N ND D N Q+I
Sbjct: 182 NSGENLAECKATTDTIKSGILLVKGEVGEGGNKINWNDTDGLPCALGDQHNSLSQLIVGG 241
Query: 175 ESAENL--------VEQQQPINNNTNNGDTKSVATAIIHETPNKTTDTTKVFTAINDTTS 226
S L VE + +N D K+V + II+ + K + +K +A + +
Sbjct: 242 GSGVKLKDSTLVFPVEATKTTKDNAEK-DGKTV-SMIIYTSDTKNWNLSKGMSADDCSDP 299
Query: 227 TILEDTTEDDSLLLGKMVVC 246
+++E ED L++ M C
Sbjct: 300 SVVEWGKEDKKLIM--MTAC 317
>M.Javanica_Scaff6004g042031 on XP_805733 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 823
Score = 26.2 bits (56), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 199 VATAIIHETPNKTTDTTKVFTAINDTTSTIL 229
VAT IHE P + + +NDT ST L
Sbjct: 520 VATMSIHEVPQAGSPIPLMGVIMNDTKSTAL 550
>M.Javanica_Scaff6004g042031 on XP_820181 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 648
Score = 25.8 bits (55), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 13/20 (65%)
Query: 193 NGDTKSVATAIIHETPNKTT 212
N D VAT I+HE P K+T
Sbjct: 515 NYDFTIVATVIVHEVPKKST 534
>M.Javanica_Scaff6004g042031 on XP_820062 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 898
Score = 25.8 bits (55), Expect = 3.8, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 40/99 (40%), Gaps = 18/99 (18%)
Query: 199 VATAIIHETPNKTTDTTKVFTAINDTTSTILEDT--TEDDSLLLGKMVVCTH---RILKS 253
V A+IH+ P K T + ++D T+L T D G+ + H R + S
Sbjct: 561 VVMAVIHDEPKKRTPIPLIRVVMDDNDRTVLFGVFYTHD-----GRWMTVIHGGGRQILS 615
Query: 254 EGMDCE-----AIGLEKSVYDLLINYKQMRAEYAKKIKG 287
G D E + + +DL IN RA Y KG
Sbjct: 616 SGWDPEKPCQVVLRHDTGHWDLYIN---ARAAYLGTYKG 651
>M.Javanica_Scaff6004g042031 on XP_803347 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 688
Score = 25.0 bits (53), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 39/99 (39%), Gaps = 18/99 (18%)
Query: 199 VATAIIHETPNKTTDTTKVFTAINDTTSTILEDT--TEDDSLLLGKMVVCTH---RILKS 253
V AI+H+ P K T + ++D T+L T D G+ + H R + S
Sbjct: 408 VVMAIVHDEPKKRTPIPLIRVVMDDNGKTVLFGVFYTHD-----GRWMTVIHSGGRQILS 462
Query: 254 EGMDCE-----AIGLEKSVYDLLINYKQMRAEYAKKIKG 287
G D E + + +DL IN R Y KG
Sbjct: 463 TGWDPEKPSQVVLRHDTGHWDLYIN---ARVAYFGTYKG 498
>M.Javanica_Scaff6004g042031 on XP_815493 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 706
Score = 25.0 bits (53), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 11/73 (15%)
Query: 151 NNGGENNLNDEDSGNEGLQIIEDAESAENLV----EQQQPINNNTNNG-------DTKSV 199
++GG+ ++D N + E+ N P+NN +N D V
Sbjct: 463 SSGGDTWIDDYRCVNASVTKAAKVENGFNFTGPGSRATWPVNNREDNNQYGFVNYDFTVV 522
Query: 200 ATAIIHETPNKTT 212
AT IH+ P K+T
Sbjct: 523 ATVTIHQVPKKST 535
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6173g042778
(96 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAM47174 Rh4 (Adhesin) [Plasmodium falciparum] 23 3.0
AAM47175 Rh4 (Adhesin) [Plasmodium falciparum] 23 3.0
AAM47192 Rh4 (Adhesin) [Plasmodium falciparum] 23 3.1
AAA83031 Hemolysin (Invasion) [Cryptosporidium parvum] 23 4.3
XP_805038 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 7.4
>M.Javanica_Scaff6173g042778 on AAM47174 Rh4 (Adhesin) [Plasmodium falciparum]
Length = 1711
Score = 23.5 bits (49), Expect = 3.0, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 38 HERSRHPISSATVVSKLLIQPAHLRSHSVSHWSSPKSRNQGATLLHACEHFKYIT 92
+++ +H ++ LIQP+H+ H + P ++ Q T+LH E K T
Sbjct: 1383 NKKIQHFKEETQIMINKLIQPSHIHLHKM---KLPITQQQLNTILHRNEQTKNAT 1434
>M.Javanica_Scaff6173g042778 on AAM47175 Rh4 (Adhesin) [Plasmodium falciparum]
Length = 1711
Score = 23.5 bits (49), Expect = 3.0, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 38 HERSRHPISSATVVSKLLIQPAHLRSHSVSHWSSPKSRNQGATLLHACEHFKYIT 92
+++ +H ++ LIQP+H+ H + P ++ Q T+LH E K T
Sbjct: 1385 NKKIQHFKEETQIMINKLIQPSHIHLHKM---KLPITQQQLNTILHRNEQTKNAT 1436
>M.Javanica_Scaff6173g042778 on AAM47192 Rh4 (Adhesin) [Plasmodium falciparum]
Length = 1716
Score = 23.5 bits (49), Expect = 3.1, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 38 HERSRHPISSATVVSKLLIQPAHLRSHSVSHWSSPKSRNQGATLLHACEHFKYIT 92
+++ +H ++ LIQP+H+ H + P ++ Q T+LH E K T
Sbjct: 1384 NKKIQHFKEETQIMINKLIQPSHIHLHKM---KLPITQQQLNTILHRNEQTKNAT 1435
>M.Javanica_Scaff6173g042778 on AAA83031 Hemolysin (Invasion) [Cryptosporidium parvum]
Length = 229
Score = 22.7 bits (47), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 31 RSCTEFS--HERSRHPISSATVVSKLLIQ---PAHLRSHSVSHWSSPKSRNQGATLL 82
+ EFS ++ + P SA + +I P+ + + +++S+P+ NQG L
Sbjct: 19 ETLNEFSNMYKHKKMPCKSALNFGENIINMGAPSFIPEYPTAYYSNPEVMNQGINSL 75
>M.Javanica_Scaff6173g042778 on XP_805038 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 927
Score = 22.3 bits (46), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 6 NTSSSPTISPAATIIKSNTSTTTV 29
NT++ PT+ P AT T TT+
Sbjct: 717 NTNTQPTVPPPATAGPQQTDQTTL 740
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff290g004466
(136 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001608668 variant erythrocyte surface antigen-1, alpha subun... 30 0.029
XP_001609754 variant erythrocyte surface antigen-1, alpha subun... 28 0.19
XP_001609618 variant erythrocyte surface antigen-1, alpha subun... 27 0.62
XP_001609666 variant erythrocyte surface antigen-1, alpha subun... 26 0.67
AAT99615 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 26 0.86
AAT99620 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 26 0.86
AAT99621 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 26 0.86
AAS46308 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 26 0.86
AAT99622 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 26 0.87
AAT99618 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 26 0.91
AAS46315 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 26 0.91
AAS46321 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 26 0.91
AAS46323 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 26 0.91
AAS46318 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 26 0.92
AAS46319 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 26 0.92
AAS46324 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 26 0.92
AAS46313 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 26 0.93
AAS46317 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 26 0.93
AAS46309 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 26 0.94
AAS46311 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 26 0.94
AAS46325 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 26 0.94
AAS46316 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 26 0.94
AAS46326 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 26 0.94
AAS46314 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 26 0.95
BAC44837 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 26 1.00
XP_001609041 variant erythrocyte surface antigen-1, alpha subun... 26 1.1
XP_001350082 Rh2b (Adhesin) [Plasmodium falciparum] 24 3.1
XP_001610568 variant erythrocyte surface antigen-1, alpha subun... 23 7.9
XP_001350595 PfEMP1 (Establishment) [Plasmodium falciparum] 23 9.0
>M.Javanica_Scaff290g004466 on XP_001608668 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1337
Score = 30.4 bits (67), Expect = 0.029, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 14/105 (13%)
Query: 39 NLVKKIRSMEVSWALGAGFHLLNSYHENKLKESRDEKQRQLKEALERDRE---------- 88
+++K I S+ V LG L E+K+ E +K + K+ LE+ +E
Sbjct: 689 DVLKAIGSVVVQ--LGNAQEALEGKAESKVIEGVKQKLGEAKKELEKAKEAVESEVGMDG 746
Query: 89 -DLEARRKAIEEKEAATDK-RLASLSTLAKIFHWFSDWMTHLLTS 131
+LE +KA+E+ + D R+A L K D + L+TS
Sbjct: 747 KELEEAKKAVEKAKTEGDNVRMAKLEKKMKALENAKDALNKLMTS 791
>M.Javanica_Scaff290g004466 on XP_001609754 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1295
Score = 28.1 bits (61), Expect = 0.19, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 51 WALGAGFHLLNSYHENKLKESRDEKQRQLKEALERDREDLEARRKAIEE 99
W +G L + E L+ + E+ ++K+AL + +E LE RK +EE
Sbjct: 674 WMIGDVVVQLGNAQE-ALERRKGEEITKVKDALSKAKEGLERARKKLEE 721
>M.Javanica_Scaff290g004466 on XP_001609618 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1325
Score = 26.6 bits (57), Expect = 0.62, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 19/26 (73%)
Query: 66 NKLKESRDEKQRQLKEALERDREDLE 91
NK+ E E ++QLKE LE+++ +++
Sbjct: 793 NKVLEMLKEMEKQLKEVLEKEQSNMD 818
>M.Javanica_Scaff290g004466 on XP_001609666 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1269
Score = 26.2 bits (56), Expect = 0.67, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 70 ESRDEKQ-RQLKEALERDREDLEARRKAIEEKEAATDKRLASLS 112
E++D+ ++KEAL + +E LE + +++K K+L L+
Sbjct: 632 ETKDKDVIEKVKEALRKAKEGLETAKNGLKDKLEEAKKKLDELT 675
>M.Javanica_Scaff290g004466 on AAT99615 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 620
Score = 25.8 bits (55), Expect = 0.86, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 91 EARRKAIEE--KEAATDKRLASLSTLAKIFHWFSDW 124
E+ R I+E + T +R+ L + + F WFS W
Sbjct: 461 ESMRCGIDEVDQRRKTCERIDELENMPQFFRWFSQW 496
>M.Javanica_Scaff290g004466 on AAT99620 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 620
Score = 25.8 bits (55), Expect = 0.86, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 91 EARRKAIEE--KEAATDKRLASLSTLAKIFHWFSDW 124
E+ R I+E + T +R+ L + + F WFS W
Sbjct: 461 ESMRCGIDEVDQRRKTCERIDELENMPQFFRWFSQW 496
>M.Javanica_Scaff290g004466 on AAT99621 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 620
Score = 25.8 bits (55), Expect = 0.86, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 91 EARRKAIEE--KEAATDKRLASLSTLAKIFHWFSDW 124
E+ R I+E + T +R+ L + + F WFS W
Sbjct: 461 ESMRCGIDEVDQRRKTCERIDELENMPQFFRWFSQW 496
>M.Javanica_Scaff290g004466 on AAS46308 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 657
Score = 25.8 bits (55), Expect = 0.86, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 91 EARRKAIEE--KEAATDKRLASLSTLAKIFHWFSDW 124
E+ R I+E + T +R+ L + + F WFS W
Sbjct: 492 ESMRCGIDEVDQRRKTCERIDELENMPQFFRWFSQW 527
>M.Javanica_Scaff290g004466 on AAT99622 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 620
Score = 25.8 bits (55), Expect = 0.87, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 91 EARRKAIEE--KEAATDKRLASLSTLAKIFHWFSDW 124
E+ R I+E + T +R+ L + + F WFS W
Sbjct: 461 ESMRCGIDEVDQRRKTCERIDELENMPQFFRWFSQW 496
>M.Javanica_Scaff290g004466 on AAT99618 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 620
Score = 25.8 bits (55), Expect = 0.91, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 91 EARRKAIEE--KEAATDKRLASLSTLAKIFHWFSDW 124
E+ R I+E + T +R+ L + + F WFS W
Sbjct: 461 ESMRCGIDEVDQRRKTCERIDELENMPQFFRWFSQW 496
>M.Javanica_Scaff290g004466 on AAS46315 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 671
Score = 25.8 bits (55), Expect = 0.91, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 91 EARRKAIEE--KEAATDKRLASLSTLAKIFHWFSDW 124
E+ R I+E + T +R+ L + + F WFS W
Sbjct: 492 ESMRCGIDEVDQRRKTCERIDELENMPQFFRWFSQW 527
>M.Javanica_Scaff290g004466 on AAS46321 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 673
Score = 25.8 bits (55), Expect = 0.91, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 91 EARRKAIEE--KEAATDKRLASLSTLAKIFHWFSDW 124
E+ R I+E + T +R+ L + + F WFS W
Sbjct: 492 ESMRCGIDEVDQRRKTCERIDELENMPQFFRWFSQW 527
>M.Javanica_Scaff290g004466 on AAS46323 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 673
Score = 25.8 bits (55), Expect = 0.91, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 91 EARRKAIEE--KEAATDKRLASLSTLAKIFHWFSDW 124
E+ R I+E + T +R+ L + + F WFS W
Sbjct: 492 ESMRCGIDEVDQRRKTCERIDELENMPQFFRWFSQW 527
>M.Javanica_Scaff290g004466 on AAS46318 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 672
Score = 25.8 bits (55), Expect = 0.92, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 91 EARRKAIEE--KEAATDKRLASLSTLAKIFHWFSDW 124
E+ R I+E + T +R+ L + + F WFS W
Sbjct: 492 ESMRCGIDEVDQRRKTCERIDELENMPQFFRWFSQW 527
>M.Javanica_Scaff290g004466 on AAS46319 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 673
Score = 25.8 bits (55), Expect = 0.92, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 91 EARRKAIEE--KEAATDKRLASLSTLAKIFHWFSDW 124
E+ R I+E + T +R+ L + + F WFS W
Sbjct: 492 ESMRCGIDEVDQRRKTCERIDELENMPQFFRWFSQW 527
>M.Javanica_Scaff290g004466 on AAS46324 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 673
Score = 25.8 bits (55), Expect = 0.92, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 91 EARRKAIEE--KEAATDKRLASLSTLAKIFHWFSDW 124
E+ R I+E + T +R+ L + + F WFS W
Sbjct: 492 ESMRCGIDEVDQRRKTCERIDELENMPQFFRWFSQW 527
>M.Javanica_Scaff290g004466 on AAS46313 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 662
Score = 25.8 bits (55), Expect = 0.93, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 91 EARRKAIEE--KEAATDKRLASLSTLAKIFHWFSDW 124
E+ R I+E + T +R+ L + + F WFS W
Sbjct: 486 ESMRCGIDEVDQRRKTCERIDELENMPQFFRWFSQW 521
>M.Javanica_Scaff290g004466 on AAS46317 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 672
Score = 25.8 bits (55), Expect = 0.93, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 91 EARRKAIEE--KEAATDKRLASLSTLAKIFHWFSDW 124
E+ R I+E + T +R+ L + + F WFS W
Sbjct: 492 ESMRCGIDEVDQRRKTCERIDELENMPQFFRWFSQW 527
>M.Javanica_Scaff290g004466 on AAS46309 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 663
Score = 25.8 bits (55), Expect = 0.94, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 91 EARRKAIEE--KEAATDKRLASLSTLAKIFHWFSDW 124
E+ R I+E + T +R+ L + + F WFS W
Sbjct: 487 ESMRCGIDEVDQRRKTCERIDELENMPQFFRWFSQW 522
>M.Javanica_Scaff290g004466 on AAS46311 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 668
Score = 25.8 bits (55), Expect = 0.94, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 91 EARRKAIEE--KEAATDKRLASLSTLAKIFHWFSDW 124
E+ R I+E + T +R+ L + + F WFS W
Sbjct: 492 ESMRCGIDEVDQRRKTCERIDELENMPQFFRWFSQW 527
>M.Javanica_Scaff290g004466 on AAS46325 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 668
Score = 25.8 bits (55), Expect = 0.94, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 91 EARRKAIEE--KEAATDKRLASLSTLAKIFHWFSDW 124
E+ R I+E + T +R+ L + + F WFS W
Sbjct: 492 ESMRCGIDEVDQRRKTCERIDELENMPQFFRWFSQW 527
>M.Javanica_Scaff290g004466 on AAS46316 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 671
Score = 25.8 bits (55), Expect = 0.94, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 91 EARRKAIEE--KEAATDKRLASLSTLAKIFHWFSDW 124
E+ R I+E + T +R+ L + + F WFS W
Sbjct: 492 ESMRCGIDEVDQRRKTCERIDELENMPQFFRWFSQW 527
>M.Javanica_Scaff290g004466 on AAS46326 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 672
Score = 25.8 bits (55), Expect = 0.94, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 91 EARRKAIEE--KEAATDKRLASLSTLAKIFHWFSDW 124
E+ R I+E + T +R+ L + + F WFS W
Sbjct: 492 ESMRCGIDEVDQRRKTCERIDELENMPQFFRWFSQW 527
>M.Javanica_Scaff290g004466 on AAS46314 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 662
Score = 25.8 bits (55), Expect = 0.95, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 91 EARRKAIEE--KEAATDKRLASLSTLAKIFHWFSDW 124
E+ R I+E + T +R+ L + + F WFS W
Sbjct: 486 ESMRCGIDEVDQRRKTCERIDELENMPQFFRWFSQW 521
>M.Javanica_Scaff290g004466 on BAC44837 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 1566
Score = 25.8 bits (55), Expect = 1.00, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 91 EARRKAIEE--KEAATDKRLASLSTLAKIFHWFSDW 124
E+ R I+E + T +R+ L + + F WFS W
Sbjct: 585 ESMRCGIDEVDQRRKTCERIDELENMPQFFRWFSQW 620
>M.Javanica_Scaff290g004466 on XP_001609041 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1318
Score = 25.8 bits (55), Expect = 1.1, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 18/24 (75%)
Query: 68 LKESRDEKQRQLKEALERDREDLE 91
L+ + E ++QLKE LE+++ D++
Sbjct: 788 LEALKKEMEKQLKEVLEKEQSDMD 811
>M.Javanica_Scaff290g004466 on XP_001350082 Rh2b (Adhesin) [Plasmodium falciparum]
Length = 1115
Score = 24.3 bits (51), Expect = 3.1, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 23/38 (60%)
Query: 64 HENKLKESRDEKQRQLKEALERDREDLEARRKAIEEKE 101
E + + +E +RQ +E LER++++ + + + +KE
Sbjct: 602 QEQERLQKEEELKRQEQERLEREKQEQLQKEEELRKKE 639
>M.Javanica_Scaff290g004466 on XP_001610568 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1329
Score = 23.1 bits (48), Expect = 7.9, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Query: 73 DEKQRQLKEALERDREDLEARRKAIEE---KEAATDK 106
D+ + ++ EA+ R+ LEA K +++ KE DK
Sbjct: 771 DQGKNKISEAINGVRDALEALEKGVKDLIKKEVDNDK 807
>M.Javanica_Scaff290g004466 on XP_001350595 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2256
Score = 23.1 bits (48), Expect = 9.0, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 43 KIRSMEVSWALGAGFHLLNSYHENKLKESRDEKQRQ 78
K+R + A F L + Y + K KE +E+QRQ
Sbjct: 1031 KLRDAFIESAAVETFFLWHRYKKIKDKEKLEEQQRQ 1066
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2605g024056
(82 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_951757 VSG (Establishment) [Trypanosoma brucei] 24 0.94
XP_807772 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.9
XP_001609565 variant erythrocyte surface antigen-1, alpha subun... 23 3.2
XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum] 22 5.1
XP_001704890 CWP1 (Others) [Giardia duodenalis] 22 5.3
>M.Javanica_Scaff2605g024056 on XP_951757 VSG (Establishment) [Trypanosoma brucei]
Length = 476
Score = 24.3 bits (51), Expect = 0.94, Method: Composition-based stats.
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 64 KSCNSNTSWVGGFDK 78
K+CNSN W G DK
Sbjct: 407 KNCNSNCEWEGTEDK 421
>M.Javanica_Scaff2605g024056 on XP_807772 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 852
Score = 23.5 bits (49), Expect = 1.9, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 26 NKIPYGVEVYHNGQPALLCSKPNCFEKNYAECDE 59
NKIP G V G P+LL + F A+C +
Sbjct: 79 NKIPEGETVESLGFPSLLKVGSDVFAVAEAQCKK 112
>M.Javanica_Scaff2605g024056 on XP_001609565 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1341
Score = 23.1 bits (48), Expect = 3.2, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 11/29 (37%)
Query: 36 HNGQPALLCSKPNCFEKNYAECDERAIHK 64
H CS F KN A E IHK
Sbjct: 428 HTVDRGAFCSNATVFHKNDATITEENIHK 456
>M.Javanica_Scaff2605g024056 on XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1711
Score = 22.3 bits (46), Expect = 5.1, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 44 CSKPNCFEKNYAECDERAIHK 64
CS NC +K CDE+ K
Sbjct: 491 CSSDNCRKKPDKSCDEQITDK 511
>M.Javanica_Scaff2605g024056 on XP_001704890 CWP1 (Others) [Giardia duodenalis]
Length = 241
Score = 22.3 bits (46), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 16 KLLGAHFCGNNKIPYGVEVYHNGQPALLCSK 46
+L G G +PY +E+Y N P L C
Sbjct: 168 QLSGTVPVGLMTLPYLMELYLNCNPDLTCPD 198
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6728g045191
(150 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_818708 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.4
XP_821712 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.8
>M.Javanica_Scaff6728g045191 on XP_818708 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 929
Score = 24.3 bits (51), Expect = 4.4, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Query: 21 IPIKDNDRPEFSLKNEENENAGKELILQKSKKASKNV-VNRATCYDNNLATYINNGLY 77
+ IKD+++PE +LK NA +L++ SK V V+R T + Y+ G Y
Sbjct: 126 LTIKDDNKPEEALK-----NARVIQVLEEGASPSKRVDVSRPTAIVDGSDIYMLVGKY 178
>M.Javanica_Scaff6728g045191 on XP_821712 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 905
Score = 23.9 bits (50), Expect = 5.8, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Query: 21 IPIKDNDRPEFSLKNEENENAGKELILQKSKKASKNVVNRATCYDNNLATYINNGLYYYP 80
+ I+D PE LKN +N +E+ + KK V+R T + Y+ G Y
Sbjct: 128 LTIEDGKEPEEVLKNAKNTQVLEEVTSTEGKKRVD--VSRPTTVVDESDIYMLVG--KYS 183
Query: 81 QNMGQLSNYILERIK 95
+N G ++ L +K
Sbjct: 184 RNAGGTDDWGLLLVK 198
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5532g039875
(124 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_803409 VSG (Establishment) [Trypanosoma brucei] 27 0.46
XP_816764 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.2
XP_001609935 variant erythrocyte surface antigen-1, alpha subun... 25 2.2
XP_001349738 PfEMP1 (Establishment) [Plasmodium falciparum] 23 10.0
>M.Javanica_Scaff5532g039875 on XP_803409 VSG (Establishment) [Trypanosoma brucei]
Length = 501
Score = 26.6 bits (57), Expect = 0.46, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 11/52 (21%)
Query: 31 FSSGMFYCHYTAAT----RNFIDGKWRLFDDNSVSEKSQNEIC-----ESDC 73
S +F+ YTAAT R RL + + +EK+Q +IC E DC
Sbjct: 386 LSKALFF--YTAATLTATRELKSENSRLKETTAKAEKTQEQICNAIQNEKDC 435
>M.Javanica_Scaff5532g039875 on XP_816764 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 868
Score = 24.6 bits (52), Expect = 2.2, Method: Composition-based stats.
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 50 GKWRLFDDNSVSEKSQNEICESDCTYML 77
GKW L + + N CE++ TY +
Sbjct: 614 GKWELSCGGGTNSQEHNSACETEKTYQV 641
>M.Javanica_Scaff5532g039875 on XP_001609935 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1317
Score = 24.6 bits (52), Expect = 2.2, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 5/57 (8%)
Query: 18 DFLYCVIYHHGFQ---FSSGMFYC--HYTAATRNFIDGKWRLFDDNSVSEKSQNEIC 69
D YC IYH +Q +S Y HY T N +D F D S + + C
Sbjct: 241 DGSYCRIYHDSYQSAYTASNDPYIEKHYMTTTWNALDRYTGTFRDISTTSSQRRHQC 297
>M.Javanica_Scaff5532g039875 on XP_001349738 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2162
Score = 22.7 bits (47), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 91 AVPNKIIEKYQGITERVDRENNKQRNN 117
P KI +K + I E+VD++ ++N+
Sbjct: 1065 GTPTKISDKIKEILEKVDKKQPDKQNS 1091
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3774g031114
(509 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum] 30 0.35
XP_001609163 variant erythrocyte surface antigen-1, alpha subun... 30 0.55
XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum] 29 0.93
XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum] 28 1.7
XP_001351321 PfEMP1 (Establishment) [Plasmodium falciparum] 27 4.8
XP_001349035 PfEMP1 (Establishment) [Plasmodium falciparum] 26 6.5
XP_807074 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 6.8
XP_816764 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 9.8
>M.Javanica_Scaff3774g031114 on XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2238
Score = 30.0 bits (66), Expect = 0.35, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 368 TGNNANNSGSKPGNSGSNTENAGNTGSNAGANSGNTGT 405
+GNN SG+ SG+NT +GN + +G N+ + T
Sbjct: 1858 SGNNTTASGNNTTASGNNTTASGNNTTASGNNTTASDT 1895
Score = 30.0 bits (66), Expect = 0.43, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 375 SGSKPGNSGSNTENAGNTGSNAGANSGNTGTSTGSSSVTASVQ 417
SG+ SG+NT +GN + +G N+ +G +T +S +Q
Sbjct: 1858 SGNNTTASGNNTTASGNNTTASGNNTTASGNNTTASDTQNDIQ 1900
Score = 27.7 bits (60), Expect = 1.7, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 334 SGSGNNPSGNKPS---NSQTSTAKTSSNSGNKGGNSNTGNNANNSG 376
SG+ SGN + N+ T++ ++ SGN S+T N+ N G
Sbjct: 1858 SGNNTTASGNNTTASGNNTTASGNNTTASGNNTTASDTQNDIQNDG 1903
Score = 26.6 bits (57), Expect = 4.7, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 7/75 (9%)
Query: 356 SSNSGNKGGNSNT--GNNANNSGSKPGNSGSNT--ENAGNTGSNAGANSGNTGTSTGSSS 411
S N+ GN+ T GNN SG+ SG+NT + N N G S T +
Sbjct: 1858 SGNNTTASGNNTTASGNNTTASGNNTTASGNNTTASDTQNDIQNDGIPSDTPNTPSDIPK 1917
Query: 412 VTASVQVP---DKWD 423
+ P D+W+
Sbjct: 1918 TPSDTPPPITDDEWN 1932
Score = 26.6 bits (57), Expect = 4.8, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 340 PSGNKPSNSQTSTAKTSSNSGNKGGNSN-TGNNANNSGSK 378
PSGN + S +T + +N+ G N+ +GNN S ++
Sbjct: 1857 PSGNNTTASGNNTTASGNNTTASGNNTTASGNNTTASDTQ 1896
Score = 25.8 bits (55), Expect = 8.2, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 320 SKNTGVSCNGASSGSGSGNNPSGNK--PSNSQTSTAKTSSNSGNKGGNSNTGNNANNSGS 377
S N + ++ SG+ SGN S + T+ + T ++ N G S+T N ++
Sbjct: 1858 SGNNTTASGNNTTASGNNTTASGNNTTASGNNTTASDTQNDIQNDGIPSDTPNTPSDIPK 1917
Query: 378 KPGNS 382
P ++
Sbjct: 1918 TPSDT 1922
Score = 25.4 bits (54), Expect = 9.9, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Query: 344 KPSNSQTSTAKTSSNSGNKGGNSNTGNNANNSGSKPGNSGSNTEN 388
+PS + T+ S N+ GN+ T + N + S + S+T+N
Sbjct: 1856 EPSGNNTTA---SGNNTTASGNNTTASGNNTTASGNNTTASDTQN 1897
>M.Javanica_Scaff3774g031114 on XP_001609163 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1360
Score = 29.6 bits (65), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 30/76 (39%)
Query: 335 GSGNNPSGNKPSNSQTSTAKTSSNSGNKGGNSNTGNNANNSGSKPGNSGSNTENAGNTGS 394
G +N G K K + G+ G NA+N G+ G + ++G++
Sbjct: 136 GGSSNEHGEKTGCEYLQDVKHENKCGDCGCMKWNVTNADNEGTPLGRKCTRCSDSGDSAH 195
Query: 395 NAGANSGNTGTSTGSS 410
N+G + T T S
Sbjct: 196 RCSCNTGGSSTCTAES 211
>M.Javanica_Scaff3774g031114 on XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2264
Score = 28.9 bits (63), Expect = 0.93, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 316 KYIKSKNTGVSCNGASSGSGSGNNP---SGNKPSNSQTSTAKTSSNSGNKGGNSNT 368
KY+K KN G C +SG G N P +G++ ++ + AK ++ S G ++ +
Sbjct: 905 KYVKGKNYGWKCVPTTSG-GDNNTPGETTGSESERAEPTRAKRAAPSSPSGKDTGS 959
Score = 27.7 bits (60), Expect = 1.8, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
Query: 340 PSGNKPS---NSQTSTAKTSSNSGNKGGNSNTGNNANNSGSKPGNSGSNTENAGNT 392
PSGN + N+ T++ ++ SGN S+T N+ N G S T+N NT
Sbjct: 1894 PSGNNTTASGNNTTASGNNTTASGNNTTASDTQNDIQNDGIP---SSKITDNEWNT 1946
Score = 27.3 bits (59), Expect = 2.4, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 382 SGSNTENAGNTGSNAGANSGNTGTSTGSSSVTASVQ 417
SG+NT +GN + +G N+ +G +T +S +Q
Sbjct: 1895 SGNNTTASGNNTTASGNNTTASGNNTTASDTQNDIQ 1930
Score = 26.6 bits (57), Expect = 4.2, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 368 TGNNANNSGSKPGNSGSNTENAGNTGSNAGANSGNTGTSTGSSSVT 413
+GNN SG+ SG+NT +GN + + + SS +T
Sbjct: 1895 SGNNTTASGNNTTASGNNTTASGNNTTASDTQNDIQNDGIPSSKIT 1940
>M.Javanica_Scaff3774g031114 on XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1711
Score = 28.1 bits (61), Expect = 1.7, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 8/68 (11%)
Query: 328 NGASSGSGSGN-NPSGNKPSNSQTSTAKTSSN-------SGNKGGNSNTGNNANNSGSKP 379
N + + + SGN NPSGN P S + K S S NK N++ + KP
Sbjct: 1578 NNSGNINPSGNINPSGNTPPTSDIPSGKLSDTPSDNNIPSSNKTLNTDVSIQIHMDNPKP 1637
Query: 380 GNSGSNTE 387
N +N +
Sbjct: 1638 INQFTNMD 1645
Score = 26.9 bits (58), Expect = 3.5, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 23/57 (40%)
Query: 354 KTSSNSGNKGGNSNTGNNANNSGSKPGNSGSNTENAGNTGSNAGANSGNTGTSTGSS 410
K N N GN N N N SG+ P S + +T S+ S N +T S
Sbjct: 1571 KEEWNKDNNSGNINPSGNINPSGNTPPTSDIPSGKLSDTPSDNNIPSSNKTLNTDVS 1627
>M.Javanica_Scaff3774g031114 on XP_001351321 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3467
Score = 26.6 bits (57), Expect = 4.8, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 30/78 (38%)
Query: 344 KPSNSQTSTAKTSSNSGNKGGNSNTGNNANNSGSKPGNSGSNTENAGNTGSNAGANSGNT 403
KP+ +N N G N + G K SG +T + G + +
Sbjct: 2096 KPACEIVKELFNDTNKFKDACNLKYGGNNSRLGWKCIPSGDSTTTSSVNGDRSQRHRRAA 2155
Query: 404 GTSTGSSSVTASVQVPDK 421
G +TG S + S+ VP +
Sbjct: 2156 GEATGKSDASGSICVPPR 2173
>M.Javanica_Scaff3774g031114 on XP_001349035 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2239
Score = 26.2 bits (56), Expect = 6.5, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Query: 356 SSNSGNKGGNSNTGNN-ANNSGSKPGNSGSNTENAGNTGSNAGANSGNTGTSTGSSSVTA 414
+S+S K G+SN+ N N+G + + +G N G +GT++ + +
Sbjct: 1042 NSDSEKKDGDSNSDRNIVLNAGGDKASMEKIQQEIDEIIKQSGNNKGTSGTTSRGPQIGS 1101
Query: 415 SVQVPDK 421
PDK
Sbjct: 1102 HSPNPDK 1108
>M.Javanica_Scaff3774g031114 on XP_807074 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 822
Score = 25.8 bits (55), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 336 SGNNPSGNKPSNS-QTSTAKTSSNSG-NKGGNSNTGNNANNSGSKPGNSGSNTEN----A 389
SG N + + P +S ST+ T +SG N ++ G+ AN++ S P +SG+N+ A
Sbjct: 697 SGANSTSSTPVDSGANSTSSTPVDSGANSTSSTPVGSGANSTSSTPVDSGANSTFSSLLA 756
Query: 390 GNTGSNAGANSGNTGTSTGS 409
G++ S + G++ ST S
Sbjct: 757 GSSNSTSSTPVGSSAKSTPS 776
Score = 25.4 bits (54), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 11/79 (13%)
Query: 351 STAKTSSNSG-NKGGNSNTGNNANNSGSKPGNSGSNTENAGNTGSNA----------GAN 399
ST+ T +SG N ++ + AN++ S P +SG+N+ ++ GS A GAN
Sbjct: 689 STSLTPVDSGANSTSSTPVDSGANSTSSTPVDSGANSTSSTPVGSGANSTSSTPVDSGAN 748
Query: 400 SGNTGTSTGSSSVTASVQV 418
S + GSS+ T+S V
Sbjct: 749 STFSSLLAGSSNSTSSTPV 767
>M.Javanica_Scaff3774g031114 on XP_816764 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 868
Score = 25.4 bits (54), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 32 SQLTGSNGQPVQLVGMSLFWSSCGEGEVFYNKATVNSLKCSWNSNVVRAAMGVEYS--GC 89
SQLTG G V++ +L + G E+ NK TV SL +++ R + E S GC
Sbjct: 240 SQLTGGGGSGVKMNDSTLVFPVEGLNELDGNKKTV-SLIIHNSADTKRWTLSKEMSDGGC 298
Query: 90 QRPGYLD 96
P ++
Sbjct: 299 SDPSVVE 305
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3289g028307
(93 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001348275 RAP1 (Invasion) [Plasmodium falciparum] 25 0.76
XP_001351435 PfEMP1 (Establishment) [Plasmodium falciparum] 23 4.0
>M.Javanica_Scaff3289g028307 on XP_001348275 RAP1 (Invasion) [Plasmodium falciparum]
Length = 782
Score = 25.0 bits (53), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 40 DHIPPPILLPSKFNKNNFLYSSNSTTTHIPSIVFDRHSAEALVGSV 85
D + L+ K N +NF+ S S T HI S+++D A + +V
Sbjct: 479 DLMGGDDLIKYKENFDNFM--SISITCHIESLIYDDIEASQDIAAV 522
>M.Javanica_Scaff3289g028307 on XP_001351435 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2209
Score = 23.1 bits (48), Expect = 4.0, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 23/54 (42%)
Query: 29 PYQHSESNNNNDHIPPPILLPSKFNKNNFLYSSNSTTTHIPSIVFDRHSAEALV 82
P E N D +L ++ + N L+ + TH ++ FD+H + +
Sbjct: 1882 PITDEEWNTLKDEFISNMLQSTQNTEPNILHDNMHYNTHPNTLYFDKHEEKPFI 1935
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4997g037309
(872 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350798 PfEMP1 (Establishment) [Plasmodium falciparum] 30 0.76
XP_001349514 PfEMP1 (Establishment) [Plasmodium falciparum] 27 5.7
>M.Javanica_Scaff4997g037309 on XP_001350798 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2359
Score = 30.0 bits (66), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%)
Query: 407 NVSDNKEPVSDNKDNVSDNKEDASDNKDNVSSNKEFVSDTKNIN 450
NV +P SDN+D SD K+ S KD +S N S IN
Sbjct: 2118 NVYSGIDPTSDNRDPYSDKKDPISGTKDPISDNHHPYSGIDLIN 2161
>M.Javanica_Scaff4997g037309 on XP_001349514 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2120
Score = 26.9 bits (58), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 23/45 (51%)
Query: 408 VSDNKEPVSDNKDNVSDNKEDASDNKDNVSSNKEFVSDTKNINDS 452
SD + S N D++S N++ S N D+ S N S INDS
Sbjct: 1887 YSDKNDLYSGNHDSLSGNRDPTSANHDSYSGNHHPYSGIDLINDS 1931
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3263g028153
(456 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAB92983 SBP1 (Others) [Plasmodium falciparum] 29 0.67
XP_001612315 variant erythrocyte surface antigen-1, beta subuni... 25 7.9
XP_845635 VSG (Establishment) [Trypanosoma brucei] 25 8.9
>M.Javanica_Scaff3263g028153 on CAB92983 SBP1 (Others) [Plasmodium falciparum]
Length = 391
Score = 28.9 bits (63), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 38/97 (39%), Gaps = 4/97 (4%)
Query: 52 NYGIYKFDSPDFGHQASF-GGKQFHGEEVSISSNEGKRNGAQGWS---ASISHLLANGYS 107
NY ++P+ H F G H N N QG + ++ L A +S
Sbjct: 147 NYKSTYNNNPELIHSTDFIGSNNNHTFNFLSRYNNSVLNNMQGNTKVPGNVPELKARIFS 206
Query: 108 TSELYAVTYGDRNFTNTLKRTVDCETLIRLRRFLESV 144
E V + N TN+L C+ +I+L + SV
Sbjct: 207 EEENTEVESAENNHTNSLNPNESCDQIIKLGDIINSV 243
>M.Javanica_Scaff3263g028153 on XP_001612315 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1140
Score = 25.4 bits (54), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 7/66 (10%)
Query: 193 RQKVH-TFIGISGANYGICICSDEKLAETAPACSKKTGFWAGSGCPNAPIDECHLTSPAS 251
RQ H G GAN G+C C+ K GF G+ + E H T +
Sbjct: 984 RQGTHGNPCGTGGANQGVCGCTSVVSCTGVLPVLYKYGFGYGN------VTELHKTQVGN 1037
Query: 252 SRSHCH 257
++ CH
Sbjct: 1038 AQKKCH 1043
>M.Javanica_Scaff3263g028153 on XP_845635 VSG (Establishment) [Trypanosoma brucei]
Length = 487
Score = 25.4 bits (54), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 345 PNAPIDECHLTSPASSRSHCHSNGRYSA 372
P A ECHLT+ +S+ S G +A
Sbjct: 211 PTAATKECHLTTAHNSKGFAKSGGTDAA 238
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff613g008189
(137 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAX07978 alpha-6 giardin (Others) [Giardia duodenalis] 26 0.59
Q4VPP5 Giardin subunit alpha-6 (Others) [Giardia duodenalis] 26 0.59
XP_828097 VSG (Establishment) [Trypanosoma brucei] 25 2.5
>M.Javanica_Scaff613g008189 on AAX07978 alpha-6 giardin (Others) [Giardia duodenalis]
Length = 255
Score = 26.2 bits (56), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 43 SINFKEVLNIGVPKDLEYKEIWTPYGHHW 71
+ ++K VLN + D+ KE WT HW
Sbjct: 116 TTDYKRVLNDDLLSDIGTKEQWTKVFKHW 144
>M.Javanica_Scaff613g008189 on Q4VPP5 Giardin subunit alpha-6 (Others) [Giardia duodenalis]
Length = 255
Score = 26.2 bits (56), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 43 SINFKEVLNIGVPKDLEYKEIWTPYGHHW 71
+ ++K VLN + D+ KE WT HW
Sbjct: 116 TTDYKRVLNDDLLSDIGTKEQWTKVFKHW 144
>M.Javanica_Scaff613g008189 on XP_828097 VSG (Establishment) [Trypanosoma brucei]
Length = 520
Score = 24.6 bits (52), Expect = 2.5, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 22/59 (37%), Gaps = 13/59 (22%)
Query: 14 NVTSKDSNLSEFKIWQCERAITLFRRKPPSINFKEVLNIGVPKDLEYKEIWTPYGHHWW 72
NVT+ S WQ +L R NF E L KD Y +IW WW
Sbjct: 74 NVTTSSSE------WQKIFDTSLSREA--GTNFPETL-----KDKPYADIWKANWASWW 119
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3985g032287
(168 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6300g043319
(50 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7938g050053
(409 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff26415g092312
(84 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff31322g098550
(160 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001610908 RAP-1 (Adhesin) [Babesia bovis] 25 2.3
XP_806541 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 9.0
>M.Javanica_Scaff31322g098550 on XP_001610908 RAP-1 (Adhesin) [Babesia bovis]
Length = 565
Score = 25.0 bits (53), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 106 GIFDETFIEERRKGLEQFLNKVAGHP 131
G + FI +G +QFLN+ G P
Sbjct: 487 GTGAKNFISAAHEGTKQFLNETVGQP 512
>M.Javanica_Scaff31322g098550 on XP_806541 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 753
Score = 23.5 bits (49), Expect = 9.0, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 34/68 (50%)
Query: 90 LPGKALKRQLPFRNDDGIFDETFIEERRKGLEQFLNKVAGHPLAQNEKSLHIFLQMAELD 149
LPG +K QL D+G+ + I +G + L G+ + E++ +++ + + +
Sbjct: 318 LPGVWVKSQLGDYPDEGLHVDALITATIEGRKVMLYTQRGNFSGETERTTALYVWVTDNN 377
Query: 150 KNYIPGRI 157
+++ G +
Sbjct: 378 RSFSVGPV 385
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5878g041443
(59 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]