BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10079g057650
(78 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350936 PfEMP1 (Establishment) [Plasmodium falciparum] 22 4.1
XP_001349720 PfEMP1 (Establishment) [Plasmodium falciparum] 21 7.0
>M.Javanica_Scaff10079g057650 on XP_001350936 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2163
Score = 22.3 bits (46), Expect = 4.1, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 22/53 (41%)
Query: 24 QKNFNNLQAAFNEIKNNNVLIKNSFENEIRMIWTIYMSIERARRAESNGNKIS 76
QK N +A + K N+ + + + + W + + + E NK+S
Sbjct: 650 QKKKNEWEAIKDHFKKQNIAAETQCDPGVTLQWVLILDFLKDESTEDKENKVS 702
>M.Javanica_Scaff10079g057650 on XP_001349720 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 88
Score = 21.2 bits (43), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 9/13 (69%), Positives = 10/13 (76%)
Query: 16 QNNDAINLQKNFN 28
QNNDA LQ+NF
Sbjct: 20 QNNDAKRLQENFK 32
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1009g012004
(137 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_817493 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.17
XP_815971 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.58
XP_808669 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.3
XP_811704 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.3
XP_803984 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.3
XP_805247 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.3
XP_001348015 AMA-1 (Invasion) [Plasmodium falciparum] 24 3.4
XP_828094 VSG (Establishment) [Trypanosoma brucei] 24 4.8
XP_001351079 PfEMP1 (Establishment) [Plasmodium falciparum] 24 5.3
XP_814927 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.7
XP_001350936 PfEMP1 (Establishment) [Plasmodium falciparum] 23 8.3
>M.Javanica_Scaff1009g012004 on XP_817493 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 765
Score = 28.1 bits (61), Expect = 0.17, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Query: 40 NWVAHVQILNRSNSRYKVKIIKMYKGV 66
NW AH +L +NS+Y+V + K+ G+
Sbjct: 163 NWKAHT-VLESTNSKYRVGVAKLPTGI 188
>M.Javanica_Scaff1009g012004 on XP_815971 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 550
Score = 26.6 bits (57), Expect = 0.58, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 18/27 (66%)
Query: 40 NWVAHVQILNRSNSRYKVKIIKMYKGV 66
+W AH + + +NS+Y+V + K+ G+
Sbjct: 161 DWKAHTVLESANNSKYRVGVAKLPTGI 187
>M.Javanica_Scaff1009g012004 on XP_808669 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 533
Score = 25.4 bits (54), Expect = 1.3, Method: Composition-based stats.
Identities = 8/27 (29%), Positives = 18/27 (66%)
Query: 40 NWVAHVQILNRSNSRYKVKIIKMYKGV 66
+W AH + + +NS+Y+V + ++ G+
Sbjct: 160 DWKAHTVLESANNSKYRVGVARLPTGI 186
>M.Javanica_Scaff1009g012004 on XP_811704 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 745
Score = 25.4 bits (54), Expect = 1.3, Method: Composition-based stats.
Identities = 8/27 (29%), Positives = 18/27 (66%)
Query: 40 NWVAHVQILNRSNSRYKVKIIKMYKGV 66
+W AH + + +NS+Y+V + ++ G+
Sbjct: 161 DWQAHTVLESANNSKYRVGVARLPTGI 187
>M.Javanica_Scaff1009g012004 on XP_803984 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 794
Score = 25.4 bits (54), Expect = 1.3, Method: Composition-based stats.
Identities = 8/27 (29%), Positives = 18/27 (66%)
Query: 40 NWVAHVQILNRSNSRYKVKIIKMYKGV 66
+W AH + + +NS+Y+V + ++ G+
Sbjct: 161 DWKAHTVLESANNSKYRVGVARLPTGI 187
>M.Javanica_Scaff1009g012004 on XP_805247 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 870
Score = 25.4 bits (54), Expect = 1.3, Method: Composition-based stats.
Identities = 8/27 (29%), Positives = 18/27 (66%)
Query: 40 NWVAHVQILNRSNSRYKVKIIKMYKGV 66
+W AH + + +NS+Y+V + ++ G+
Sbjct: 161 DWKAHTVLESANNSKYRVGVARLPTGI 187
>M.Javanica_Scaff1009g012004 on XP_001348015 AMA-1 (Invasion) [Plasmodium falciparum]
Length = 622
Score = 24.3 bits (51), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 9 ILSILIVKCINIESSNCPCNPSTVENKYC 37
I++ I + +S CPC+P V N C
Sbjct: 474 IIAPRIFISDDKDSLKCPCDPEMVSNSTC 502
>M.Javanica_Scaff1009g012004 on XP_828094 VSG (Establishment) [Trypanosoma brucei]
Length = 483
Score = 23.9 bits (50), Expect = 4.8, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 101 NTKILSECRINLKWNQVSKKLKEKLNNGEINK 132
N K +EC KWN ++ K KL+ E+ K
Sbjct: 419 NKKGQNECNSPCKWNPEAEGKKCKLDKEEVKK 450
>M.Javanica_Scaff1009g012004 on XP_001351079 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2203
Score = 23.9 bits (50), Expect = 5.3, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 114 WNQVSKKLKEKLNNGEINK 132
+N++ KKL NNGE++K
Sbjct: 1495 YNKIKKKLNPCRNNGEVSK 1513
>M.Javanica_Scaff1009g012004 on XP_814927 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 759
Score = 23.5 bits (49), Expect = 5.7, Method: Composition-based stats.
Identities = 7/27 (25%), Positives = 17/27 (62%)
Query: 40 NWVAHVQILNRSNSRYKVKIIKMYKGV 66
+W AH + + +N +Y+V + ++ G+
Sbjct: 163 DWQAHTVLESANNRKYRVGVARLPTGI 189
>M.Javanica_Scaff1009g012004 on XP_001350936 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2163
Score = 23.1 bits (48), Expect = 8.3, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 114 WNQVSKKLKEKLNNGEINK 132
+N++ KLK NNGE++K
Sbjct: 1484 YNKIRTKLKPCRNNGEVSK 1502
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10033g057494
(100 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum] 23 4.3
>M.Javanica_Scaff10033g057494 on XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2994
Score = 23.1 bits (48), Expect = 4.3, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 71 RNGKVVKKETKNPNFIKDFSK 91
R+GKV+K ++ F D+SK
Sbjct: 42 RHGKVLKGNLRDAKFYHDYSK 62
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10124g057788
(95 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum] 25 1.1
XP_817721 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.9
XP_001351318 PfEMP1 (Establishment) [Plasmodium falciparum] 23 6.0
XP_829780 VSG (Establishment) [Trypanosoma brucei] 22 6.9
XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum] 22 8.3
XP_001610720 variant erythrocyte surface antigen-1, beta subuni... 22 8.5
>M.Javanica_Scaff10124g057788 on XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2994
Score = 24.6 bits (52), Expect = 1.1, Method: Composition-based stats.
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 80 QDYNNLKNKMQSCSLF 95
QD+NN+K+K+ C+ F
Sbjct: 585 QDFNNVKDKINRCTKF 600
>M.Javanica_Scaff10124g057788 on XP_817721 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 922
Score = 23.1 bits (48), Expect = 3.9, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 34 PPPIVGGADALPIQLSDSERNCLGKKDL 61
PPP+ G A +Q R LG++ L
Sbjct: 725 PPPVGGSAQGTLLQSPSDGRPPLGRESL 752
>M.Javanica_Scaff10124g057788 on XP_001351318 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2169
Score = 22.7 bits (47), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 7/14 (50%), Positives = 12/14 (85%)
Query: 80 QDYNNLKNKMQSCS 93
+DYN +K K++SC+
Sbjct: 1481 EDYNKIKKKLKSCT 1494
>M.Javanica_Scaff10124g057788 on XP_829780 VSG (Establishment) [Trypanosoma brucei]
Length = 494
Score = 22.3 bits (46), Expect = 6.9, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 33 QPPPIVGGADALPIQLSDSERNCLG 57
QP + G A+ I ++ E+NC G
Sbjct: 257 QPTAVEHGLTAIEITGANKEKNCKG 281
>M.Javanica_Scaff10124g057788 on XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2238
Score = 22.3 bits (46), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 80 QDYNNLKNKMQSCS 93
+DYN +KNK+ C+
Sbjct: 1489 EDYNKIKNKISHCT 1502
>M.Javanica_Scaff10124g057788 on XP_001610720 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1102
Score = 21.9 bits (45), Expect = 8.5, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 37/105 (35%), Gaps = 14/105 (13%)
Query: 2 LFIIHFTLFFILVKSFYIGEQQND-----FNNRGQQQPPPIVGGADALPIQLSDSERNCL 56
LF ++ + +I KS GEQ+ + + + I G DA+ L +C
Sbjct: 800 LFGFYYYIVYIGGKSGGAGEQEVNKALGIYEQESKLHMMSI--GGDAVVEALKKYGGDCS 857
Query: 57 GKKDLPTFTVNCVPDTPPAKCSE-------QDYNNLKNKMQSCSL 94
K D C P +CS+ Q Y L M L
Sbjct: 858 NKNDTLKCLYTCPNSAPTGQCSQYLSPLSGQQYGQLSPAMAGTYL 902
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10060g057589
(158 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_845142 VSG (Establishment) [Trypanosoma brucei] 25 1.6
XP_806381 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.9
XP_805196 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 7.7
XP_805195 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 7.7
>M.Javanica_Scaff10060g057589 on XP_845142 VSG (Establishment) [Trypanosoma brucei]
Length = 481
Score = 25.4 bits (54), Expect = 1.6, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 16/106 (15%)
Query: 28 LVKIKDDWEEKREFIYLKNVELEERFVLEKIEKNNNKYDTSYNYNIEGFLRRIELDSKGN 87
LV DD ++ I + N+ L + KI+ + D++ + + D K +
Sbjct: 44 LVPAVDDTQDIAATIGVINISLANADFISKIDLKKDYSDSNASM-------KEAADGKPS 96
Query: 88 NY----NV-EIDH---RLEYAEELKRRILINIAKNKILQNIHPAFE 125
Y NV E+ H + YAE ++RR L AK K++Q AF+
Sbjct: 97 KYAFLKNVLEVSHGQDKKSYAE-VRRRQLTTAAKRKLIQAAEVAFQ 141
>M.Javanica_Scaff10060g057589 on XP_806381 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1045
Score = 25.4 bits (54), Expect = 1.9, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 29 VKIKDDWEEKREFIYLKNVELEERFV-LEKIEKNNNKYDTS 68
VK+ DDWE R + + ++ V +++ E +N +Y+TS
Sbjct: 618 VKLVDDWEPNRTYQVVLRMDCHYWTVFVDREEIHNKRYNTS 658
>M.Javanica_Scaff10060g057589 on XP_805196 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 731
Score = 23.5 bits (49), Expect = 7.7, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Query: 15 LLNIKCNGRKVSILVKIKDDWEEKREF---IYLKNVELEERFVLEKIEKNNNK-YDTSYN 70
L+ + GRKV + + + W+ +RE +YL + F + + NNK +D + N
Sbjct: 359 LITVTIEGRKVMLYTQRGNFWKGQREMFNALYLWVTDNNRSFHVGPVAMYNNKNWDLASN 418
>M.Javanica_Scaff10060g057589 on XP_805195 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 769
Score = 23.5 bits (49), Expect = 7.7, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Query: 15 LLNIKCNGRKVSILVKIKDDWEEKREF---IYLKNVELEERFVLEKIEKNNNK-YDTSYN 70
L+ + GRKV + + + W+ +RE +YL + F + + NNK +D + N
Sbjct: 397 LITVTIEGRKVMLYTQRGNFWKGQREMFNALYLWVTDNNRSFHVGPVAMYNNKNWDLASN 456
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10013g057441
(125 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351438 PfEMP1 (Establishment) [Plasmodium falciparum] 28 0.21
XP_001351439 PfEMP1 (Establishment) [Plasmodium falciparum] 28 0.22
XP_652394 Igl2 (Adhesin) [Entamoeba histolytica] 24 2.7
XP_829768 VSG (Establishment) [Trypanosoma brucei] 24 2.8
XP_001351564 PfEMP1 (Establishment) [Plasmodium falciparum] 23 5.0
XP_001350409 PfEMP1 (Establishment) [Plasmodium falciparum] 23 5.1
XP_001349738 PfEMP1 (Establishment) [Plasmodium falciparum] 23 5.2
XP_654447 Igl1 (Adhesin) [Entamoeba histolytica] 23 7.1
XP_001610720 variant erythrocyte surface antigen-1, beta subuni... 23 8.9
>M.Javanica_Scaff10013g057441 on XP_001351438 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2312
Score = 27.7 bits (60), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 19/50 (38%)
Query: 73 DYGWKCCYGFKCVDFKCKKCTVNGSKCSTASDCCSGICGGSFSIPGRVCI 122
+YGWKC D + G++ +D GG G +CI
Sbjct: 889 NYGWKCIPSGNTSDTTGSESEATGARQRRDTDSSGDTTGGKDGATGGLCI 938
>M.Javanica_Scaff10013g057441 on XP_001351439 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2326
Score = 27.7 bits (60), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 19/50 (38%)
Query: 73 DYGWKCCYGFKCVDFKCKKCTVNGSKCSTASDCCSGICGGSFSIPGRVCI 122
+YGWKC D + G++ +D GG G +CI
Sbjct: 903 NYGWKCIPSGNTSDTTGSESEATGARQRRDTDSSGDTTGGKDGATGGLCI 952
>M.Javanica_Scaff10013g057441 on XP_652394 Igl2 (Adhesin) [Entamoeba histolytica]
Length = 1105
Score = 24.3 bits (51), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 4/38 (10%)
Query: 68 GNKCDDYGWKCCYGFKCVDFKCKKCTVNGSKCSTASDC 105
G+KCD+ C G+ + +CK CT + S+CS+A++C
Sbjct: 868 GSKCDE----CKTGYYMSNGECKPCTNHCSECSSAAEC 901
>M.Javanica_Scaff10013g057441 on XP_829768 VSG (Establishment) [Trypanosoma brucei]
Length = 485
Score = 24.3 bits (51), Expect = 2.8, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Query: 47 NSKIGDGQYQYKCFKSGCVHEGNKCDD 73
+SK + + Q C K GC E NKC D
Sbjct: 437 DSKCSEKKKQEDC-KDGCKWEDNKCKD 462
>M.Javanica_Scaff10013g057441 on XP_001351564 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2207
Score = 23.5 bits (49), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Query: 81 GFKCVDFKCKKCTVNGSKCSTASDCCSGICGGSFSIPGR 119
G+KC+ + GS ST SD + GGS +P R
Sbjct: 880 GWKCIPTSGGEKATGGSGESTGSDATT---GGSICVPPR 915
>M.Javanica_Scaff10013g057441 on XP_001350409 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2223
Score = 23.5 bits (49), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 27/70 (38%), Gaps = 10/70 (14%)
Query: 60 FKSGCVHEGNKCDDYGWKC-CYGFKCVDFK---------CKKCTVNGSKCSTASDCCSGI 109
F C + NK +YGW+C G D K ++ + S+ S S
Sbjct: 936 FSDACDLKYNKGKNYGWRCIPTGNTSNDNKGENSGNGALLQRSKRHTSESSADSAPSGDT 995
Query: 110 CGGSFSIPGR 119
GGS +P R
Sbjct: 996 TGGSICVPPR 1005
>M.Javanica_Scaff10013g057441 on XP_001349738 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2162
Score = 23.5 bits (49), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Query: 81 GFKCVDFKCKKCTVNGSKCSTASDCCSGICGGSFSIPGR 119
G+KC+ + GS ST SD + GGS +P R
Sbjct: 880 GWKCIPTSGGEKATGGSGESTGSDATT---GGSICVPPR 915
>M.Javanica_Scaff10013g057441 on XP_654447 Igl1 (Adhesin) [Entamoeba histolytica]
Length = 1101
Score = 23.1 bits (48), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 4/38 (10%)
Query: 68 GNKCDDYGWKCCYGFKCVDFKCKKCTVNGSKCSTASDC 105
G+KCD C G+ + +CK CT + S+CS+A++C
Sbjct: 864 GSKCDG----CKTGYYMSNGECKPCTNHCSECSSAAEC 897
>M.Javanica_Scaff10013g057441 on XP_001610720 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1102
Score = 22.7 bits (47), Expect = 8.9, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 29/74 (39%), Gaps = 20/74 (27%)
Query: 34 DSDLKCCRGLNCKNSKIGDGQYQYKCFKSGCVHEGNKCDDYGWKCCY-GFKCVDFKCKKC 92
D D C +G K++ IG KC C+ G CC G K KC C
Sbjct: 143 DQDKCCLKGEGGKSTGIGR-----KC----------DCNGSGVNCCSPGGK----KCHDC 183
Query: 93 TVNGSKCSTASDCC 106
T G K + A+ C
Sbjct: 184 TECGPKATEATKKC 197
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1002g011925
(838 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAK31237 variable surface protein 21e (Establishment) [Giardi... 27 2.9
XP_001610196 variant erythrocyte surface antigen-1, alpha subun... 27 4.7
AAK31242 variable surface protein 42d (Establishment) [Giardi... 27 4.7
XP_820135 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 6.7
XP_843645 VSG (Establishment) [Trypanosoma brucei] 26 9.4
>M.Javanica_Scaff1002g011925 on AAK31237 variable surface protein 21e (Establishment) [Giardia
duodenalis]
Length = 132
Score = 26.6 bits (57), Expect = 2.9, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 14/33 (42%)
Query: 456 INDIKNSRDCLDICDGQTKTTCNSAQWTATEGC 488
++D N C+ D T NSAQW C
Sbjct: 41 VDDSTNGHKCVSCGDETGVTDANSAQWKGVANC 73
>M.Javanica_Scaff1002g011925 on XP_001610196 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1330
Score = 27.3 bits (59), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Query: 792 LNEKTNAFSNILSECRAVRDALGRKKCPYGMRWNGLKREACQPPVDC 838
L + AF NI ECR + KC G+ G + CQ V C
Sbjct: 1131 LESLSEAFRNI--ECRGCKGQCDPNKCKKGVHGQGSGQCGCQSIVSC 1175
>M.Javanica_Scaff1002g011925 on AAK31242 variable surface protein 42d (Establishment) [Giardia
duodenalis]
Length = 169
Score = 26.6 bits (57), Expect = 4.7, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 14/33 (42%)
Query: 456 INDIKNSRDCLDICDGQTKTTCNSAQWTATEGC 488
++D N C+ D T NSAQW C
Sbjct: 78 VDDSTNGHKCVSCGDETGVTDANSAQWKGVANC 110
>M.Javanica_Scaff1002g011925 on XP_820135 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1519
Score = 26.9 bits (58), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Query: 333 NESLINSLENNSIINSTLIPSTSSIEPIPTEIISTVPPPSQNSSVE 378
NE+ I +L N + IP S EP P E S P P++ S E
Sbjct: 676 NETEIGALNANKVT----IPPPKSAEPKPAEPKSAEPKPAEPKSAE 717
>M.Javanica_Scaff1002g011925 on XP_843645 VSG (Establishment) [Trypanosoma brucei]
Length = 569
Score = 26.2 bits (56), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 5/32 (15%)
Query: 468 ICDGQTKTTCNSAQW----TATEG-CELYSNF 494
+ G T TTC SA W TA +G C Y NF
Sbjct: 349 VVGGTTPTTCTSASWDPGSTAGKGLCISYENF 380
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10041g057515
(209 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_807738 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 7.8
XP_818096 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 7.9
XP_813616 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 9.7
>M.Javanica_Scaff10041g057515 on XP_807738 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 896
Score = 24.3 bits (51), Expect = 7.8, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Query: 106 GTFEGDDNTSAKELFNSIDLNNDGAVTKEEFVAYHAHQVREEEEKTSKTSFAEADTNKDG 165
G GDD ++ L+ S DG+ K+E +A + + EE S S + +
Sbjct: 429 GPVSGDDAAASSLLYKS-----DGSGDKKELIALYEKKKDGEESSPSMVSVLLTEQLQRV 483
Query: 166 KLQLAEVLAVDEM 178
K LA VD++
Sbjct: 484 KDVLATWKKVDDL 496
>M.Javanica_Scaff10041g057515 on XP_818096 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 861
Score = 24.3 bits (51), Expect = 7.9, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Query: 106 GTFEGDDNTSAKELFNSIDLNNDGAVTKEEFVAYHAHQVREEEEKTSKTSFAEADTNKDG 165
G GDD ++ L+ S DG+ K+E +A + + EE S S + +
Sbjct: 429 GPVSGDDAAASSLLYKS-----DGSGDKKELIALYEKKKDGEESSPSMVSVLLTEQLQRV 483
Query: 166 KLQLAEVLAVDEM 178
K LA VD++
Sbjct: 484 KDVLATWKKVDDL 496
>M.Javanica_Scaff10041g057515 on XP_813616 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1038
Score = 23.9 bits (50), Expect = 9.7, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 141 AHQVREEEEKTSKTSFAEADTNKDGK 166
A + + EE TS E+DTN+ G+
Sbjct: 727 ASESKSEESATSHEELNESDTNEQGE 752
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10053g057561
(149 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_966151 TLP (Invasion) [Plasmodium falciparum] 24 5.7
XP_001352170 MSP1 (Invasion) [Plasmodium falciparum] 24 6.2
>M.Javanica_Scaff10053g057561 on XP_966151 TLP (Invasion) [Plasmodium falciparum]
Length = 1371
Score = 23.9 bits (50), Expect = 5.7, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 7 HNNTPMQINQEMSLETFTQEQQINLIQKEENNVVKTEGVEIQ 48
HNN N E +++ I+++ KEE+N+ E+Q
Sbjct: 1036 HNNNYYMTN-EHDERKIKKQENIDILSKEEDNISSNYNNELQ 1076
>M.Javanica_Scaff10053g057561 on XP_001352170 MSP1 (Invasion) [Plasmodium falciparum]
Length = 1720
Score = 23.9 bits (50), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 9/30 (30%), Positives = 19/30 (63%)
Query: 30 NLIQKEENNVVKTEGVEIQYGITNSIPTIF 59
NL +EEN + + +++ + I N+IP ++
Sbjct: 833 NLTPEEENELKSCDPLDLLFNIQNNIPAMY 862
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1003g011928
(797 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10095g057697
(144 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_818399 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.81
XP_807166 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.3
XP_814899 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.3
XP_820184 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.3
XP_818196 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.8
XP_812607 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.8
XP_818193 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.4
XP_819907 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.6
XP_803417 VSG (Establishment) [Trypanosoma brucei] 24 4.8
XP_807738 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 7.8
XP_818096 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 7.9
>M.Javanica_Scaff10095g057697 on XP_818399 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 953
Score = 26.2 bits (56), Expect = 0.81, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
Query: 96 AEKEIPRRQMRHLLADEFGTGRMGRQYKRMRP-----CFYSPIQCLM 137
A + PR Q R +A G R G + +R RP FYS + L+
Sbjct: 6 AAVKAPRTQNRRRVAGSSGRRREGGESERQRPNMSRHLFYSAVLLLL 52
>M.Javanica_Scaff10095g057697 on XP_807166 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 801
Score = 25.8 bits (55), Expect = 1.3, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 96 AEKEIPRRQMRHLLADEFGTGRMGRQYKRMRP 127
A + PR+ R + G R GR+ +R RP
Sbjct: 6 AAVKAPRKHNRRHVTGSSGRSREGRESERQRP 37
>M.Javanica_Scaff10095g057697 on XP_814899 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 827
Score = 25.8 bits (55), Expect = 1.3, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Query: 96 AEKEIPRRQMRHLLADEFGTGRMGRQYKRMRP-----CFYSPIQCLM 137
A + PR R + G R GR+ +R RP FYS + L+
Sbjct: 6 AAVKAPRTHNRRRVTGSSGGRREGRESERQRPNMSRHLFYSAVLLLL 52
>M.Javanica_Scaff10095g057697 on XP_820184 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1050
Score = 25.8 bits (55), Expect = 1.3, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 56 PSRIGDSGHVNTVSEEPKMVIIEGEQNDNDLETKTENQNS--AEKEIP 101
P+ D+ +++ +EE + ++ GE+ +ET + N N+ E EIP
Sbjct: 948 PTSAEDTDNISR-TEEAEFLVENGEEAPQTVETASGNTNTTPGETEIP 994
>M.Javanica_Scaff10095g057697 on XP_818196 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 841
Score = 25.0 bits (53), Expect = 1.8, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Query: 96 AEKEIPRRQMRHLLADEFGTGRMGRQYKRMRPC-----FYSPIQCLM 137
A + PR RH + G R GR+ + RP FYS + L+
Sbjct: 6 AAVKAPRTHNRHRVTGSSGRRREGRESEPQRPNISRHHFYSAVLLLL 52
>M.Javanica_Scaff10095g057697 on XP_812607 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 957
Score = 25.0 bits (53), Expect = 1.8, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Query: 96 AEKEIPRRQMRHLLADEFGTGRMGRQYKRMRP-----CFYSPIQCLM 137
A + PR R + G R GR+ +R RP FYS + L+
Sbjct: 6 AAVKAPRTHNRRGVTGSSGGRREGRESERQRPNMSRHLFYSAVALLI 52
>M.Javanica_Scaff10095g057697 on XP_818193 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 838
Score = 24.3 bits (51), Expect = 3.4, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 92 NQNSAEKEIPRRQMRHLLADEFGTGRMGRQYKRMRP 127
+ +A + PR RH + G R GR+ + RP
Sbjct: 56 HSRAAAVKAPRTHNRHRVTGSSGRRREGRESELQRP 91
>M.Javanica_Scaff10095g057697 on XP_819907 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 943
Score = 23.9 bits (50), Expect = 4.6, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 96 AEKEIPRRQMRHLLADEFGTGRMGRQYKRMRP 127
A E PR R +A G R GR+ + RP
Sbjct: 6 AAVEAPRTDYRRRVAGSSGRRREGRESEPQRP 37
>M.Javanica_Scaff10095g057697 on XP_803417 VSG (Establishment) [Trypanosoma brucei]
Length = 540
Score = 23.9 bits (50), Expect = 4.8, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 69 SEEPKMVIIEGEQNDNDLETKTENQNSAEKE 99
S+ K ++E E+ ++ETKT +++ +KE
Sbjct: 391 SDLNKQKLLEAEKKLQEVETKTATKSAEDKE 421
>M.Javanica_Scaff10095g057697 on XP_807738 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 896
Score = 23.1 bits (48), Expect = 7.8, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 5/41 (12%)
Query: 96 AEKEIPRRQMRHLLADEFGTGRMGRQYKRMRP-----CFYS 131
A + PR Q R + G R GR+ + RP FYS
Sbjct: 6 AAVKAPRTQNRRCVTGSSGRRREGRESEPQRPNMSRHLFYS 46
>M.Javanica_Scaff10095g057697 on XP_818096 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 861
Score = 23.1 bits (48), Expect = 7.9, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 5/41 (12%)
Query: 96 AEKEIPRRQMRHLLADEFGTGRMGRQYKRMRP-----CFYS 131
A + PR Q R + G R GR+ + RP FYS
Sbjct: 6 AAVKAPRTQNRRCVTGSSGRRREGRESEPQRPNMSRHLFYS 46
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10124g057786
(80 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_829780 VSG (Establishment) [Trypanosoma brucei] 25 0.80
XP_817721 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.2
XP_001351564 PfEMP1 (Establishment) [Plasmodium falciparum] 22 5.3
>M.Javanica_Scaff10124g057786 on XP_829780 VSG (Establishment) [Trypanosoma brucei]
Length = 494
Score = 24.6 bits (52), Expect = 0.80, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 33 QPPPIVGGADALPIQLSDSERNCLGKER 60
QP + G A+ I ++ E+NC G E+
Sbjct: 257 QPTAVEHGLTAIEITGANKEKNCKGPEQ 284
>M.Javanica_Scaff10124g057786 on XP_817721 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 922
Score = 23.5 bits (49), Expect = 2.2, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 34 PPPIVGGADALPIQLSDSERNCLGKE 59
PPP+ G A +Q R LG+E
Sbjct: 725 PPPVGGSAQGTLLQSPSDGRPPLGRE 750
>M.Javanica_Scaff10124g057786 on XP_001351564 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2207
Score = 22.3 bits (46), Expect = 5.3, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 25 DFNNRGQQQPPPIVGGADALPIQLSDSERNCLGK 58
D+N ++ P I G + I+ D + NC GK
Sbjct: 1502 DYNKIRKKLKPCINDGKEPKCIKTCDKKCNCAGK 1535
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10124g057789
(549 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_805203 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 9.2
>M.Javanica_Scaff10124g057789 on XP_805203 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 844
Score = 25.4 bits (54), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 200 IFSFVGLEERPDGGYRFAVYGDMGNV 225
+FS + + E+ DG Y +Y D G+
Sbjct: 296 VFSLMAMNEKNDGVYSMIIYSDNGST 321
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10148g057884
(85 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_965997 PfEMP1 (Establishment) [Plasmodium falciparum] 24 1.2
>M.Javanica_Scaff10148g057884 on XP_965997 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2879
Score = 24.3 bits (51), Expect = 1.2, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 6/58 (10%)
Query: 13 IPYFVGTIGNTAVVRTLPYLVQNPCMRACRAKTRNGQNAERQ------NTERQNEELP 64
I +F IG T + Y V P +C K+ N N+E+Q N +++N LP
Sbjct: 1688 ITFFNDNIGTTTINEKEMYKVFPPNSDSCDNKSSNRFNSEKQWLCNNINLKKKNICLP 1745
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10142g057866
(75 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAL38222 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 3.2
AAL38220 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 3.5
AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 3.5
AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 3.5
AAL38218 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 3.5
XP_001609101 variant erythrocyte surface antigen-1, alpha subun... 23 3.6
XP_001609163 variant erythrocyte surface antigen-1, alpha subun... 22 6.6
XP_804086 Trans-sialidase (Invasion) [Trypanosoma cruzi] 21 9.3
>M.Javanica_Scaff10142g057866 on AAL38222 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2976
Score = 22.7 bits (47), Expect = 3.2, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Query: 26 VEKLEEKRKVKGTAYYTKKKAEMKLKRQAIEKAKSKTAVYDKVLEQ 71
+++ EE +KVK K + E+K +Q IEK K+ Y+ +EQ
Sbjct: 1181 LQQNEEYQKVKNE----KDQNEIKKIKQLIEKNKNDILTYENNIEQ 1222
>M.Javanica_Scaff10142g057866 on AAL38220 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2957
Score = 22.7 bits (47), Expect = 3.5, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Query: 26 VEKLEEKRKVKGTAYYTKKKAEMKLKRQAIEKAKSKTAVYDKVLEQ 71
+++ EE +KVK K + E+K +Q IEK K+ Y+ +EQ
Sbjct: 1168 LQQNEEYQKVKNE----KDQNEIKKIKQLIEKNKNDILTYENNIEQ 1209
>M.Javanica_Scaff10142g057866 on AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2965
Score = 22.7 bits (47), Expect = 3.5, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Query: 26 VEKLEEKRKVKGTAYYTKKKAEMKLKRQAIEKAKSKTAVYDKVLEQ 71
+++ EE +KVK K + E+K +Q IEK K+ Y+ +EQ
Sbjct: 1174 LQQNEEYQKVKNE----KDQNEIKKIKQLIEKNKNDILTYENNIEQ 1215
>M.Javanica_Scaff10142g057866 on AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2969
Score = 22.7 bits (47), Expect = 3.5, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Query: 26 VEKLEEKRKVKGTAYYTKKKAEMKLKRQAIEKAKSKTAVYDKVLEQ 71
+++ EE +KVK K + E+K +Q IEK K+ Y+ +EQ
Sbjct: 1176 LQQNEEYQKVKNE----KDQNEIKKIKQLIEKNKNDILTYENNIEQ 1217
>M.Javanica_Scaff10142g057866 on AAL38218 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2977
Score = 22.7 bits (47), Expect = 3.5, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Query: 26 VEKLEEKRKVKGTAYYTKKKAEMKLKRQAIEKAKSKTAVYDKVLEQ 71
+++ EE +KVK K + E+K +Q IEK K+ Y+ +EQ
Sbjct: 1172 LQQNEEYQKVKNE----KDQNEIKKIKQLIEKNKNDILTYENNIEQ 1213
>M.Javanica_Scaff10142g057866 on XP_001609101 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1359
Score = 22.7 bits (47), Expect = 3.6, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 23 QGIVEKLEEKRKVKGTAYYTKKKAEMKLKRQ-AIEKAKSK 61
+G+ EK++ ++K T K+K E K Q A+E AK +
Sbjct: 731 EGVKEKVKALEEIKKTLEAAKEKLEEAKKTQEALEAAKGE 770
>M.Javanica_Scaff10142g057866 on XP_001609163 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1360
Score = 21.9 bits (45), Expect = 6.6, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 24 GIVEKLEEKRKVKGTAYYTKKKAEMKLKRQ-AIEKAKSK 61
G+ EK++ ++K T K+K E K Q A+E AK +
Sbjct: 732 GVKEKVKALEEIKKTLEAAKEKLEEAKKTQEALEAAKGE 770
>M.Javanica_Scaff10142g057866 on XP_804086 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 742
Score = 21.2 bits (43), Expect = 9.3, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Query: 22 YQGIVEKLEEKRKVKGTAYYTKKKAEM 48
+ G+ EKLE+ RKV A + +K A++
Sbjct: 158 FVGLTEKLEDMRKV--LAAWKEKDAQI 182
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10015g057447
(264 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609034 variant erythrocyte surface antigen-1, alpha subun... 26 2.9
XP_829790 VSG (Establishment) [Trypanosoma brucei] 25 7.3
>M.Javanica_Scaff10015g057447 on XP_001609034 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1313
Score = 25.8 bits (55), Expect = 2.9, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Query: 124 EDDLNGAIQGLLRLQDTYKLKTKDLANGIDDLNGAIQGLLRLQDTYKLK 172
++ LN A GL ++ +K KD G+D GA+ L T KLK
Sbjct: 768 KNKLNAAHHGLQKVLKIFKKWLKDTTKGLDGHKGAL-----LDATSKLK 811
>M.Javanica_Scaff10015g057447 on XP_829790 VSG (Establishment) [Trypanosoma brucei]
Length = 468
Score = 24.6 bits (52), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 191 DAKVCYEIGLAAYNE-EDYYHSILWMEEANERYYLLEKESTEINKSDILNILSISLYKQ 248
DA E+G A NE + Y H I ++E + Y+ +E E+ I+N L + KQ
Sbjct: 338 DAATKLELGYAKQNEIKSYEHHIQILQEQAWQQYIGAEEELELRAKKIINQLPKTDPKQ 396
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10014g057444
(1549 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAW78133 TRAP (Invasion) [Plasmodium falciparum] 30 1.4
AAW78131 TRAP (Invasion) [Plasmodium falciparum] 28 3.8
AAW78171 TRAP (Invasion) [Plasmodium falciparum] 28 3.9
AAW78172 TRAP (Invasion) [Plasmodium falciparum] 28 4.4
AAQ11892 TRAP (Invasion) [Plasmodium falciparum] 28 4.9
AAA29773 TRAP (Invasion) [Plasmodium falciparum] 28 5.1
AAK94670 SUB1 (Protease) [Toxoplasma gondii] 27 5.5
>M.Javanica_Scaff10014g057444 on AAW78133 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 599 KDKRKKTKEGLSEEVLKEEKGEDTKETKEKKGDKK-EDDKKREEDLEGRERDNEKINRKE 657
K R LS +VL E+ + ++++ G++ + + RE GR +N NRK
Sbjct: 408 KSDRYIPYSPLSPKVLDNERKQSDPQSQDNNGNRHVPNSEDRETHPHGRNNENRSYNRKH 467
Query: 658 DDKKKKRKEEDQE 670
+D K + E+ E
Sbjct: 468 NDTPKYHEREEHE 480
>M.Javanica_Scaff10014g057444 on AAW78131 TRAP (Invasion) [Plasmodium falciparum]
Length = 557
Score = 28.5 bits (62), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 599 KDKRKKTKEGLSEEVLKEEKGEDTKETKEKKGDKK-EDDKKREEDLEGRERDNEKINRKE 657
K R L +VL E+ + ++++ G++ + + RE GR +N NRK
Sbjct: 426 KSDRYIPYSPLPPKVLDNERKQSDPQSQDNNGNRHVPNSEDRETHPHGRNNENRSYNRKH 485
Query: 658 DDKKKKRKEEDQE 670
+D K + E+ E
Sbjct: 486 NDTPKYHEREEHE 498
>M.Javanica_Scaff10014g057444 on AAW78171 TRAP (Invasion) [Plasmodium falciparum]
Length = 551
Score = 28.5 bits (62), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 599 KDKRKKTKEGLSEEVLKEEKGEDTKETKEKKGDKK-EDDKKREEDLEGRERDNEKINRKE 657
K R L +VL E+ + ++++ G++ + + RE GR +N NRK
Sbjct: 420 KSDRYIPYSPLPPKVLDNERKQSDPQSQDNNGNRHVPNSEDRETHPHGRNNENRSYNRKH 479
Query: 658 DDKKKKRKEEDQE 670
+D K + E+ E
Sbjct: 480 NDTPKYHEREEHE 492
>M.Javanica_Scaff10014g057444 on AAW78172 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 28.1 bits (61), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 599 KDKRKKTKEGLSEEVLKEEKGEDTKETKEKKGDKK-EDDKKREEDLEGRERDNEKINRKE 657
K R L +VL E+ + ++++ G++ + + RE GR +N NRK
Sbjct: 414 KSDRYIPYSPLPPKVLDNERKQSDPQSQDNNGNRHVPNSEDRETHPHGRNNENRSYNRKH 473
Query: 658 DDKKKKRKEEDQE 670
+D K + E+ E
Sbjct: 474 NDTPKYHEREEHE 486
>M.Javanica_Scaff10014g057444 on AAQ11892 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 28.1 bits (61), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 599 KDKRKKTKEGLSEEVLKEEKGEDTKETKEKKGDKK-EDDKKREEDLEGRERDNEKINRKE 657
K R L +VL E+ + ++++ G++ + + RE GR +N NRK
Sbjct: 408 KSDRYIPYSPLPPKVLDNERKQSDPQSQDNNGNRHVPNSEDRETHPHGRNNENRSYNRKH 467
Query: 658 DDKKKKRKEEDQE 670
+D K + E+ E
Sbjct: 468 NDTPKYHEREEHE 480
>M.Javanica_Scaff10014g057444 on AAA29773 TRAP (Invasion) [Plasmodium falciparum]
Length = 568
Score = 28.1 bits (61), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 599 KDKRKKTKEGLSEEVLKEEKGEDTKETKEKKGDKK-EDDKKREEDLEGRERDNEKINRKE 657
K R L +VL E+ + ++++ G++ + + RE GR +N NRK
Sbjct: 417 KSDRYIPYSPLPPKVLDNERKQSDPQSQDNNGNRHVPNSEDRETHPHGRNNENRSYNRKH 476
Query: 658 DDKKKKRKEEDQE 670
+D K + E+ E
Sbjct: 477 NDTPKYHEREEHE 489
>M.Javanica_Scaff10014g057444 on AAK94670 SUB1 (Protease) [Toxoplasma gondii]
Length = 255
Score = 27.3 bits (59), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 1140 KVEENIEEETRSLKKERDEQKREEKIGEEDIR-GFKKERD 1178
KVE IE+E +L ++R + K ++DIR G K E+D
Sbjct: 60 KVEAEIEDEVETLNRDRRLHRGHNKYADDDIRQGLKDEQD 99
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10136g057833
(50 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_812720 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 3.5
XP_803420 VSG (Establishment) [Trypanosoma brucei] 21 4.2
>M.Javanica_Scaff10136g057833 on XP_812720 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1041
Score = 21.6 bits (44), Expect = 3.5, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 8 SSRAGSSEPQSMEFSDEIQW 27
+S +EP S E +D++ W
Sbjct: 931 TSSTSDAEPTSAEKTDDVSW 950
>M.Javanica_Scaff10136g057833 on XP_803420 VSG (Establishment) [Trypanosoma brucei]
Length = 526
Score = 21.2 bits (43), Expect = 4.2, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 5 EPSSSRAGSSEPQSMEFSDEIQWRFSQIKGNIETDD 40
E ++ G S + S E W ++ KG E+D+
Sbjct: 420 ETEITKTGCSGKGKQDCSGECTWEGNEEKGRCESDE 455
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1009g012003
(151 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_814156 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.7
XP_802171 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.2
>M.Javanica_Scaff1009g012003 on XP_814156 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 759
Score = 24.3 bits (51), Expect = 3.7, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 35/76 (46%)
Query: 9 FAFIVLKQLIIIANACTCLPATTEEKYCGSDWAAHILPLKKEKINETEGFSKYVRYTVEI 68
F VL L+++ + A+ +EK +D + K+ E+ G V+ ++
Sbjct: 44 FTSAVLLLLVVMMCCGSGGAASADEKQSEADPNFEWNDIPKDVTVESLGVPGLVKVGSDV 103
Query: 69 LNIYKAICQQKRKKDF 84
+ +A C++ K+DF
Sbjct: 104 FAVAEAQCKKDEKEDF 119
>M.Javanica_Scaff1009g012003 on XP_802171 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 274
Score = 23.9 bits (50), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 3/26 (11%)
Query: 95 GVNLEIDKEYLIGGKYFEDNTKKRVS 120
GV+ D ++ GK FEDNTK + S
Sbjct: 120 GVSYTADNKW---GKMFEDNTKTQSS 142
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1004g011945
(143 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351221 CTRP (Adhesin) [Plasmodium falciparum] 26 1.3
>M.Javanica_Scaff1004g011945 on XP_001351221 CTRP (Adhesin) [Plasmodium falciparum]
Length = 2112
Score = 25.8 bits (55), Expect = 1.3, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 28 PRATTTGSPLGSNHHHPAISSPSSCGVQSANGSGSLSRKGS 68
P +T GSP S +P+ S+P S +S G+ S S GS
Sbjct: 782 PSESTPGSPSESTPGNPSESTPGSPS-ESTPGNPSESTPGS 821
Score = 25.0 bits (53), Expect = 2.0, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 28 PRATTTGSPLGSNHHHPAISSPSSCGVQSANGSGSLSRKGS 68
P +T GSP S P+ S+P S +S G+ S S GS
Sbjct: 766 PSESTPGSPSESTPGSPSESTPGSPS-ESTPGNPSESTPGS 805
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10049g057541
(84 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351221 CTRP (Adhesin) [Plasmodium falciparum] 26 0.37
XP_954179 TashAT2 (Establishment) [Theileria annulata] 24 1.5
XP_808156 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 6.1
AAK07771 MSA-1 (Invasion) [Babesia bovis] 22 7.8
AAK07772 MSA-1 (Invasion) [Babesia bovis] 22 8.1
>M.Javanica_Scaff10049g057541 on XP_001351221 CTRP (Adhesin) [Plasmodium falciparum]
Length = 2112
Score = 25.8 bits (55), Expect = 0.37, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 33 EFAGLAEHQMDPEEEKVMGEVESAVDNFKMPSIPP 67
+F A +D E K++G+ E +VD M + PP
Sbjct: 1435 DFFAYAIDNIDETEYKILGDCEGSVDMGLMGNSPP 1469
>M.Javanica_Scaff10049g057541 on XP_954179 TashAT2 (Establishment) [Theileria annulata]
Length = 1161
Score = 23.9 bits (50), Expect = 1.5, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 36 GLAEHQMDPEEEKVMGEVESAVDNFKMPSIPPKVIPAGA 74
LAE +D E+E V EV+ ++ +K+ IP G+
Sbjct: 287 ALAEEGIDLEKEIVGREVDKIIEKYKITKETQTDIPTGS 325
>M.Javanica_Scaff10049g057541 on XP_808156 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1058
Score = 22.3 bits (46), Expect = 6.1, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 8/55 (14%)
Query: 20 VSLPFDNLNKDGSEFAGLAEHQMDPEEEKVMGEVESAVDNFKMPSIPPKVIPAGA 74
VS+ ++ +++ + + LAE D +EE ESA D +P+ P + AG+
Sbjct: 744 VSVASESRSEESTTYEKLAEGDTDKQEE------ESADD--PVPAAPSFTVVAGS 790
>M.Javanica_Scaff10049g057541 on AAK07771 MSA-1 (Invasion) [Babesia bovis]
Length = 334
Score = 21.9 bits (45), Expect = 7.8, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 20/53 (37%), Gaps = 3/53 (5%)
Query: 25 DNLNKDGSEFAGLAEHQMDPEEEKVMGEVESAVDNFKMPSIP--PKVIPAGAR 75
D+L E E Q +E GE D PS P PK PAG +
Sbjct: 228 DSLTVPPEELVASIERQTPQQETSAQGETTGQPDTAGQPSSPGSPKE-PAGEQ 279
>M.Javanica_Scaff10049g057541 on AAK07772 MSA-1 (Invasion) [Babesia bovis]
Length = 339
Score = 21.9 bits (45), Expect = 8.1, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 20/53 (37%), Gaps = 3/53 (5%)
Query: 25 DNLNKDGSEFAGLAEHQMDPEEEKVMGEVESAVDNFKMPSIP--PKVIPAGAR 75
D+L E E Q +E GE D PS P PK PAG +
Sbjct: 228 DSLTVPPEELVASIERQTPQQETSAQGETTGQPDTAGQPSSPGSPKE-PAGEQ 279
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10030g057488
(110 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351437 PfEMP1 (Establishment) [Plasmodium falciparum] 27 0.36
XP_001610908 RAP-1 (Adhesin) [Babesia bovis] 23 4.9
XP_804124 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 6.0
XP_813740 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 6.2
XP_814225 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 6.5
>M.Javanica_Scaff10030g057488 on XP_001351437 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2277
Score = 26.6 bits (57), Expect = 0.36, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 14 HCFNEATNNAKNNGLVPEELSCTVSSELLD 43
HC N NN K+N + E++ V S +LD
Sbjct: 1454 HCDNSNGNNCKDNKITAEKIGNGVDSTVLD 1483
>M.Javanica_Scaff10030g057488 on XP_001610908 RAP-1 (Adhesin) [Babesia bovis]
Length = 565
Score = 23.1 bits (48), Expect = 4.9, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 22/50 (44%)
Query: 7 CSLGIFQHCFNEATNNAKNNGLVPEELSCTVSSELLDSDIWIPLRPTSQN 56
C +F H + +N + L P E+ ++S L +D + LR N
Sbjct: 10 CLFLVFSHHVSAFRHNQRVGSLAPAEVVGDLTSTLETADTLMTLRDHMHN 59
>M.Javanica_Scaff10030g057488 on XP_804124 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 272
Score = 22.7 bits (47), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 12/45 (26%), Positives = 18/45 (40%)
Query: 62 LNQFNKVSQSKKQAGVTLWGKPFSVNVMVVDKKNLSNENNIIGGA 106
+ + K + K A WG P S+N + N +GGA
Sbjct: 167 VGEVKKCTVDDKTAASIKWGSPVSLNEFFPAEMEGMQANQFLGGA 211
>M.Javanica_Scaff10030g057488 on XP_813740 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 717
Score = 22.7 bits (47), Expect = 6.2, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 67 KVSQSKKQAGVTLWGKPFSV 86
K S ++++G +WG P S+
Sbjct: 223 KPSTDRRESGTIIWGDPTSL 242
>M.Javanica_Scaff10030g057488 on XP_814225 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 717
Score = 22.7 bits (47), Expect = 6.5, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 67 KVSQSKKQAGVTLWGKPFSV 86
K S ++++G +WG P S+
Sbjct: 223 KPSTDRRESGTIIWGDPTSL 242
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10063g057598
(125 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_816177 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.9
>M.Javanica_Scaff10063g057598 on XP_816177 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 779
Score = 23.1 bits (48), Expect = 5.9, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 88 KVFNNLILGSQDAVVAGYPRIQNTDRNL 115
+V+ N +GS+ AV +G+ + DRN+
Sbjct: 353 RVWGNKQVGSEKAVRSGFTTAKIEDRNV 380
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10124g057785
(75 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001608665 variant erythrocyte surface antigen-1, alpha subun... 25 0.38
XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum] 23 2.5
>M.Javanica_Scaff10124g057785 on XP_001608665 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1326
Score = 25.4 bits (54), Expect = 0.38, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 9 CLICILLIETAYCALPPKYLG--LCNWQACVGEKEEGMHTS 47
C+ ++ + A A P+ LG ++ VGEKE+GM+ S
Sbjct: 985 CVYTLVRVTAALSATTPQVLGDVFGFFRGGVGEKEKGMNKS 1025
>M.Javanica_Scaff10124g057785 on XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2994
Score = 23.1 bits (48), Expect = 2.5, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 18 TAYCALPPKYLGLCNWQAC 36
+ +C P Y CNW+ C
Sbjct: 467 SKFCGACPFYGVKCNWKTC 485
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10099g057706
(118 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_809846 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.4
XP_817537 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.1
AAY44828 MSA-1 (Invasion) [Babesia bovis] 23 5.8
AAY44836 MSA-1 (Invasion) [Babesia bovis] 23 6.2
XP_001349533 PfEMP3 (Establishment) [Plasmodium falciparum] 23 6.8
XP_818190 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 9.0
>M.Javanica_Scaff10099g057706 on XP_809846 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 764
Score = 24.3 bits (51), Expect = 2.4, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 12/71 (16%)
Query: 34 DGGDSPPLFIDWTQPRINPTPNSFYYKNKPYSATENGERIYPSKNGKGKDYGPFGVGLVG 93
DG + P +D ++P N Y YS T GE+ G + G GL+
Sbjct: 152 DGSEDPRKKVDVSRPTTVMKRNDIYMLVGKYSRTAAGEK-------SGANDG----GLL- 199
Query: 94 LMKGEGKEESE 104
L+KGE +ES+
Sbjct: 200 LVKGEVIDESD 210
>M.Javanica_Scaff10099g057706 on XP_817537 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 762
Score = 23.5 bits (49), Expect = 5.1, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 12/70 (17%)
Query: 34 DGGDSPPLFIDWTQPRINPTPNSFYYKNKPYSATENGERIYPSKNGKGKDYGPFGVGLVG 93
DG + P +D ++P N Y YS T GE+ G + G GL+
Sbjct: 151 DGSEDPRKKVDVSRPTTVMKRNDIYMLVGKYSRTAAGEK-------SGANDG----GLL- 198
Query: 94 LMKGEGKEES 103
L+KGE +ES
Sbjct: 199 LVKGEVIDES 208
>M.Javanica_Scaff10099g057706 on AAY44828 MSA-1 (Invasion) [Babesia bovis]
Length = 311
Score = 23.1 bits (48), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 63 PYSATENGERIYPSKNGKGKDYGPFGV 89
P TENG+ PS+ G G + P G
Sbjct: 242 PSGQTENGDLAAPSEPGAGAEPSPQGT 268
>M.Javanica_Scaff10099g057706 on AAY44836 MSA-1 (Invasion) [Babesia bovis]
Length = 310
Score = 23.1 bits (48), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 63 PYSATENGERIYPSKNGKGKDYGPFGV 89
P TENG+ PS+ G G + P G
Sbjct: 242 PSGQTENGDLAAPSEPGAGAEPSPQGT 268
>M.Javanica_Scaff10099g057706 on XP_001349533 PfEMP3 (Establishment) [Plasmodium falciparum]
Length = 2441
Score = 23.1 bits (48), Expect = 6.8, Method: Composition-based stats.
Identities = 7/31 (22%), Positives = 20/31 (64%)
Query: 4 FLIYFFIFSPFLFKFLEAKNYLIKRSFDDYD 34
FL+ F+FSP ++ + ++ + + ++++ D
Sbjct: 18 FLLKIFLFSPLIWILIYSEYFTVVKNYNKID 48
>M.Javanica_Scaff10099g057706 on XP_818190 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 807
Score = 22.7 bits (47), Expect = 9.0, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 26/58 (44%)
Query: 55 NSFYYKNKPYSATENGERIYPSKNGKGKDYGPFGVGLVGLMKGEGKEESESSPLSWLK 112
+S YK+ N E I + KG P +G+V ++ E ++ + ++W K
Sbjct: 436 SSLLYKSAGSGNNNNEELIALYEKKKGGGEKPSSLGMVSVLLTEQLKQVKEVLVTWKK 493
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10099g057705
(53 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_818963 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 0.50
XP_802391 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 3.1
XP_816853 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 3.3
>M.Javanica_Scaff10099g057705 on XP_818963 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1055
Score = 23.9 bits (50), Expect = 0.50, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 7/40 (17%)
Query: 19 ENIS----AEIRFK--RQYPMFIDWTAPRRGSTPQGGNGI 52
+NIS AE F+ ++ P +D TAP +T GG GI
Sbjct: 962 DNISWTEGAEFSFEDVKEVPQTVD-TAPENTNTTPGGEGI 1000
>M.Javanica_Scaff10099g057705 on XP_802391 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 198
Score = 21.6 bits (44), Expect = 3.1, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Query: 29 RQYPMFIDWTAPRRGSTPQGGNGI 52
++ P +D TAP +T GG GI
Sbjct: 122 KEVPQTVD-TAPANTNTTPGGEGI 144
>M.Javanica_Scaff10099g057705 on XP_816853 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1044
Score = 21.6 bits (44), Expect = 3.3, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Query: 29 RQYPMFIDWTAPRRGSTPQGGNGI 52
++ P +D TAP +T GG GI
Sbjct: 967 KEVPQTVD-TAPANTNTTPGGEGI 989
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10161g057919
(57 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10046g057527
(205 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609666 variant erythrocyte surface antigen-1, alpha subun... 31 0.060
XP_001351079 PfEMP1 (Establishment) [Plasmodium falciparum] 24 7.4
>M.Javanica_Scaff10046g057527 on XP_001609666 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1269
Score = 30.8 bits (68), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 38/95 (40%), Gaps = 4/95 (4%)
Query: 11 VSQFGNTLSTANRHSSTASTKCSQRLFEAKGNPAPGSNGFSIEVNDAPPGLDELNDDGDD 70
V Q GN K + L +AK NG ++ +A LDEL + G
Sbjct: 621 VVQLGNAQEALETKDKDVIEKVKEALRKAKEGLETAKNGLKDKLEEAKKKLDELTNGGGS 680
Query: 71 GLEGIKWNSSGIQPDG---YIPGKHYV-LTVRGWR 101
G+ G SG+ Y PGK+ + ++G R
Sbjct: 681 GILGEVVGGSGLDKANNGEYDPGKNKLSAAIKGVR 715
>M.Javanica_Scaff10046g057527 on XP_001351079 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2203
Score = 24.3 bits (51), Expect = 7.4, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 106 VQTFRGFGLTALFEDTGKAAGHFDVKKNRKGRR 138
+Q +G G A F DT K + K N G+R
Sbjct: 48 LQKAKGIGELAAFPDTCKRVEQYRSKANGDGKR 80
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff100g001905
(54 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum] 26 0.082
XP_001609532 variant erythrocyte surface antigen-1, alpha subun... 22 3.8
>M.Javanica_Scaff100g001905 on XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2264
Score = 26.2 bits (56), Expect = 0.082, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 27 GGGLDDPWDQGGLRSRRSPQPILDQL 52
G G DDP D + S + P P L Q+
Sbjct: 1053 GSGSDDPNDPNNIYSGKIPPPFLRQM 1078
>M.Javanica_Scaff100g001905 on XP_001609532 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 202
Score = 21.6 bits (44), Expect = 3.8, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 23 FPTGGGGLDDPWDQGGLRS 41
F TGG G ++ W Q G S
Sbjct: 152 FLTGGSGGNNRWSQDGTLS 170
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10160g057914
(201 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10112g057752
(66 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10122g057781
(237 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609751 variant erythrocyte surface antigen-1, alpha subun... 27 1.7
XP_846884 VSG (Establishment) [Trypanosoma brucei] 25 4.3
>M.Javanica_Scaff10122g057781 on XP_001609751 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1298
Score = 26.6 bits (57), Expect = 1.7, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 96 NPNKEEKKRKGTGRSGRDWRPKREANK 122
NP ++++KRKGT +D R + NK
Sbjct: 965 NPEEDKEKRKGTCNHDQDPRTSTDNNK 991
>M.Javanica_Scaff10122g057781 on XP_846884 VSG (Establishment) [Trypanosoma brucei]
Length = 493
Score = 25.0 bits (53), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 137 NSERLRQIILKARGRDSTTLKRNIQTMAERT 167
+S+RL Q KA G D T K N+ E+T
Sbjct: 319 SSDRLEQATNKAYGPDGTNYKNNVWHKIEQT 349
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10041g057513
(80 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_814492 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 0.95
XP_818308 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 0.95
XP_817001 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 0.95
XP_818312 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 0.95
XP_811004 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 0.95
XP_810496 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 0.95
XP_811955 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 0.97
XP_817716 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.0
XP_846274 VSG (Establishment) [Trypanosoma brucei] 23 2.2
XP_808217 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.2
XP_817875 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.4
XP_818232 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.9
XP_813421 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.9
XP_804800 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 6.2
XP_001351877 PfEMP1 (Establishment) [Plasmodium falciparum] 22 8.6
XP_811031 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 9.6
XP_828097 VSG (Establishment) [Trypanosoma brucei] 22 9.8
>M.Javanica_Scaff10041g057513 on XP_814492 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 923
Score = 24.3 bits (51), Expect = 0.95, Method: Composition-based stats.
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 18 PSISTGGASSSSGNAPHDPKLA 39
P++ G A + G+ PH P +
Sbjct: 804 PTVGEGSADTIQGDGPHTPSVG 825
>M.Javanica_Scaff10041g057513 on XP_818308 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 925
Score = 24.3 bits (51), Expect = 0.95, Method: Composition-based stats.
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 18 PSISTGGASSSSGNAPHDPKLA 39
P++ G A + G+ PH P +
Sbjct: 805 PTVGEGSADTIQGDGPHTPSVG 826
>M.Javanica_Scaff10041g057513 on XP_817001 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 928
Score = 24.3 bits (51), Expect = 0.95, Method: Composition-based stats.
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 18 PSISTGGASSSSGNAPHDPKLA 39
P++ G A + G+ PH P +
Sbjct: 809 PTVGEGSADTIQGDGPHTPSVG 830
>M.Javanica_Scaff10041g057513 on XP_818312 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 928
Score = 24.3 bits (51), Expect = 0.95, Method: Composition-based stats.
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 18 PSISTGGASSSSGNAPHDPKLA 39
P++ G A + G+ PH P +
Sbjct: 807 PTVGEGSADTIQGDGPHTPSVG 828
>M.Javanica_Scaff10041g057513 on XP_811004 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 933
Score = 24.3 bits (51), Expect = 0.95, Method: Composition-based stats.
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 18 PSISTGGASSSSGNAPHDPKLA 39
P++ G A + G+ PH P +
Sbjct: 812 PTVGEGSADTIQGDGPHTPSVG 833
>M.Javanica_Scaff10041g057513 on XP_810496 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 943
Score = 24.3 bits (51), Expect = 0.95, Method: Composition-based stats.
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 18 PSISTGGASSSSGNAPHDPKLA 39
P++ G A + G+ PH P +
Sbjct: 820 PTVGEGSADTIQGDGPHTPSVG 841
>M.Javanica_Scaff10041g057513 on XP_811955 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 92
Score = 23.9 bits (50), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 3 KSFNLFLILTFIRILPSISTGGASSSSGNAPHDPKLAL 40
++F ++L ++ TGG + + P DPK L
Sbjct: 42 RAFTSAVLLLLFVVMMCCGTGGGVQADEDLPADPKYQL 79
>M.Javanica_Scaff10041g057513 on XP_817716 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 948
Score = 24.3 bits (51), Expect = 1.0, Method: Composition-based stats.
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 18 PSISTGGASSSSGNAPHDPKLA 39
P++ G A + G+ PH P +
Sbjct: 825 PTVGEGSADTIQGDGPHTPSVG 846
>M.Javanica_Scaff10041g057513 on XP_846274 VSG (Establishment) [Trypanosoma brucei]
Length = 547
Score = 23.5 bits (49), Expect = 2.2, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 27 SSSGNAPHDPKLALRLIREYGSVSLAEYKKYEECIEMI 64
+SSG+ D K+ L + G+ + E K +++CIE +
Sbjct: 249 TSSGD---DGKVTLTQLTPAGTQTRPEAKPWQDCIEAV 283
>M.Javanica_Scaff10041g057513 on XP_808217 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 880
Score = 23.5 bits (49), Expect = 2.2, Method: Composition-based stats.
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 22 TGGASSSSGNAPHDPKL 38
T SSS+G +P +PKL
Sbjct: 742 TPSQSSSAGQSPSEPKL 758
>M.Javanica_Scaff10041g057513 on XP_817875 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 935
Score = 23.1 bits (48), Expect = 2.4, Method: Composition-based stats.
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 22 TGGASSSSGNAPHDPKL 38
T SSS+G +P +PKL
Sbjct: 795 TPSQSSSAGQSPSEPKL 811
>M.Javanica_Scaff10041g057513 on XP_818232 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 933
Score = 22.7 bits (47), Expect = 3.9, Method: Composition-based stats.
Identities = 6/22 (27%), Positives = 11/22 (50%)
Query: 18 PSISTGGASSSSGNAPHDPKLA 39
P++ G + G+ PH P +
Sbjct: 812 PTVGEGSVDTIQGDGPHTPSVG 833
>M.Javanica_Scaff10041g057513 on XP_813421 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 746
Score = 21.9 bits (45), Expect = 5.9, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 6 NLFLILTFIRILPSISTGGASSSSGNAP 33
+ + L F+ ++ TGGA+SS AP
Sbjct: 43 HFYSALLFLFLVVCCGTGGAASSEVTAP 70
>M.Javanica_Scaff10041g057513 on XP_804800 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 940
Score = 21.9 bits (45), Expect = 6.2, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 6 NLFLILTFIRILPSISTGGASSSSGNAP 33
+ + L F+ ++ TGGA+SS AP
Sbjct: 35 HFYSALLFLFLVVCCGTGGAASSEVTAP 62
>M.Javanica_Scaff10041g057513 on XP_001351877 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2270
Score = 21.6 bits (44), Expect = 8.6, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 47 GSVSLAEYKKYEECIEMINNIHSEEEYKN 75
G L + K +E+C E N SEE KN
Sbjct: 1543 GYYILKKRKVFEQCKENGGNKCSEESKKN 1571
>M.Javanica_Scaff10041g057513 on XP_811031 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 785
Score = 21.6 bits (44), Expect = 9.6, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 17 LPSISTGGASSSSGNAPH--DPKLALRLIREYGSVSLAEY 54
LP+I G S +GNA H D L + R +G V +Y
Sbjct: 464 LPTIGLVGFFSDNGNATHWNDEYLGVD-ARVFGEVKKVQY 502
>M.Javanica_Scaff10041g057513 on XP_828097 VSG (Establishment) [Trypanosoma brucei]
Length = 520
Score = 21.6 bits (44), Expect = 9.8, Method: Composition-based stats.
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 55 KKYEECIEMINNIHSEEEYKN 75
K E+ + + N+H +EE N
Sbjct: 346 KSLEDAVTALENMHKQEEKAN 366
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10019g057457
(467 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349034 PfEMP1 (Establishment) [Plasmodium falciparum] 25 9.3
>M.Javanica_Scaff10019g057457 on XP_001349034 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 25.4 bits (54), Expect = 9.3, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 26/60 (43%)
Query: 402 EHTSPDYLLNVIKHLRNELMKKEERIRSLEEYTDKLVAKVMVTNPELLAAPINTSTTKII 461
+H S +LL+ I + ++ MKKE RS E KL + P N K+I
Sbjct: 15 DHQSAKHLLDSIGKIVHDQMKKEAEQRSKGELEGKLSFATVSGETGATDKPCNFDYDKLI 74
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1009g012001
(165 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351563 PfEMP1 (Establishment) [Plasmodium falciparum] 25 2.6
XP_001612314 variant erythrocyte surface antigen-1, alpha subun... 24 6.7
>M.Javanica_Scaff1009g012001 on XP_001351563 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2149
Score = 25.0 bits (53), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 72 FKDDKDCECTKNNYLFTSANEGLCGVYLK 100
F ++ EC KN ++ NEG C Y +
Sbjct: 95 FSKERGAECDKNKISGSNDNEGACAPYRR 123
>M.Javanica_Scaff1009g012001 on XP_001612314 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1308
Score = 23.9 bits (50), Expect = 6.7, Method: Composition-based stats.
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 113 NGERYIGVHKWRETYRCPYNIELNY 137
NG+ + + + +++YR Y +EL Y
Sbjct: 246 NGKNSLRIREHKDSYRSAYEVELVY 270
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1009g011994
(95 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_807772 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.4
AAL38220 PfNBP1 (Adhesin) [Plasmodium falciparum] 22 9.4
AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum] 22 9.4
AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum] 22 9.4
AAL38222 PfNBP1 (Adhesin) [Plasmodium falciparum] 22 9.4
AAL38218 PfNBP1 (Adhesin) [Plasmodium falciparum] 22 9.4
>M.Javanica_Scaff1009g011994 on XP_807772 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 852
Score = 24.3 bits (51), Expect = 1.4, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 14/33 (42%), Gaps = 3/33 (9%)
Query: 60 QDTLVWFDVPRRAGFDNSERSYSSTVSWARGKL 92
+DTL W G SY S V W GKL
Sbjct: 282 KDTLTW---KLSKGMSADGCSYPSVVEWEEGKL 311
>M.Javanica_Scaff1009g011994 on AAL38220 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2957
Score = 21.9 bits (45), Expect = 9.4, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 40 LEKICRKLHQIDKNTRNCRIQDTL 63
LE+I + ++IDK + +IQ+TL
Sbjct: 757 LEEIKNEQNKIDKTIDDIKIQETL 780
>M.Javanica_Scaff1009g011994 on AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2965
Score = 21.9 bits (45), Expect = 9.4, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 40 LEKICRKLHQIDKNTRNCRIQDTL 63
LE+I + ++IDK + +IQ+TL
Sbjct: 763 LEEIKNEQNKIDKTIDDIKIQETL 786
>M.Javanica_Scaff1009g011994 on AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2969
Score = 21.9 bits (45), Expect = 9.4, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 40 LEKICRKLHQIDKNTRNCRIQDTL 63
LE+I + ++IDK + +IQ+TL
Sbjct: 765 LEEIKNEQNKIDKTIDDIKIQETL 788
>M.Javanica_Scaff1009g011994 on AAL38222 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2976
Score = 21.9 bits (45), Expect = 9.4, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 40 LEKICRKLHQIDKNTRNCRIQDTL 63
LE+I + ++IDK + +IQ+TL
Sbjct: 765 LEEIKNEQNKIDKTIDDIKIQETL 788
>M.Javanica_Scaff1009g011994 on AAL38218 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2977
Score = 21.9 bits (45), Expect = 9.4, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 40 LEKICRKLHQIDKNTRNCRIQDTL 63
LE+I + ++IDK + +IQ+TL
Sbjct: 761 LEEIKNEQNKIDKTIDDIKIQETL 784
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff100g001904
(100 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_803347 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.69
XP_829782 VSG (Establishment) [Trypanosoma brucei] 25 0.79
XP_802455 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.5
XP_820062 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.7
XP_954175 TashAT3 (Establishment) [Theileria annulata] 23 4.9
XP_829779 VSG (Establishment) [Trypanosoma brucei] 22 7.0
XP_001351080 PfEMP1 (Establishment) [Plasmodium falciparum] 22 9.5
XP_001349219 PfEMP1 (Establishment) [Plasmodium falciparum] 22 9.9
>M.Javanica_Scaff100g001904 on XP_803347 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 688
Score = 25.4 bits (54), Expect = 0.69, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 6/57 (10%)
Query: 13 IFFVVLSFKDDATLVIAHPTHLSQPGLQMLLITGQQQDKPHRIVKRFSCSGQDCYIN 69
+ F V D + + H G + +L TG +KP ++V R D YIN
Sbjct: 437 VLFGVFYTHDGRWMTVIHS------GGRQILSTGWDPEKPSQVVLRHDTGHWDLYIN 487
>M.Javanica_Scaff100g001904 on XP_829782 VSG (Establishment) [Trypanosoma brucei]
Length = 497
Score = 25.0 bits (53), Expect = 0.79, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 41 MLLITGQQQDKPHRIVKRFSCSGQDCYINCVNQEKNEKDKEKAKNDCAGQC 91
+L+ + + K R V S +DC N QE+N++ +K +DC C
Sbjct: 389 LLIAIPELKAKADRTVA--SEPAKDCSTNGGIQEENKECSKKTGDDCKDGC 437
>M.Javanica_Scaff100g001904 on XP_802455 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 356
Score = 24.3 bits (51), Expect = 1.5, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 38 GLQMLLITGQQQDKPHRIVKRFSCSGQDCYIN 69
G + +L TG +KP ++V R D YIN
Sbjct: 202 GGRQILSTGWDPEKPCQVVLRHDTGHWDLYIN 233
>M.Javanica_Scaff100g001904 on XP_820062 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 898
Score = 23.1 bits (48), Expect = 4.7, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 38 GLQMLLITGQQQDKPHRIVKRFSCSGQDCYIN 69
G + +L +G +KP ++V R D YIN
Sbjct: 609 GGRQILSSGWDPEKPCQVVLRHDTGHWDLYIN 640
>M.Javanica_Scaff100g001904 on XP_954175 TashAT3 (Establishment) [Theileria annulata]
Length = 994
Score = 23.1 bits (48), Expect = 4.9, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 5/50 (10%)
Query: 37 PGLQMLLITG-----QQQDKPHRIVKRFSCSGQDCYINCVNQEKNEKDKE 81
P L ML I+G ++ HRI +FS Y N V +E + D E
Sbjct: 762 PRLLMLEISGPNDGVTEELHFHRIGDKFSLISSKLYDNVVYEESPDYDFE 811
>M.Javanica_Scaff100g001904 on XP_829779 VSG (Establishment) [Trypanosoma brucei]
Length = 486
Score = 22.3 bits (46), Expect = 7.0, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 71 VNQEKNEKD-KEKAKNDCAGQCDCNLSSKK 99
V+ K EK K+ KN C DC S K
Sbjct: 421 VSDTKTEKKCKDTEKNKCTADKDCEYSEGK 450
>M.Javanica_Scaff100g001904 on XP_001351080 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2209
Score = 22.3 bits (46), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 13/27 (48%), Gaps = 4/27 (14%)
Query: 67 YINCVNQEKNEKDKEKAKNDCAGQCDC 93
Y NC+N DK KN C CDC
Sbjct: 605 YKNCINN----GDKSTCKNVCKKPCDC 627
>M.Javanica_Scaff100g001904 on XP_001349219 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2595
Score = 21.9 bits (45), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 81 EKAKNDCAGQCDC 93
EK KN+C +CDC
Sbjct: 668 EKCKNECNTKCDC 680
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1007g011971
(192 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_809719 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.095
XP_828104 VSG (Establishment) [Trypanosoma brucei] 25 2.4
XP_809960 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.6
XP_001349522 PfEMP1 (Establishment) [Plasmodium falciparum] 25 2.8
XP_804686 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.7
XP_001351561 PfEMP1 (Establishment) [Plasmodium falciparum] 25 4.2
XP_001348946 PfEMP1 (Establishment) [Plasmodium falciparum] 25 4.2
XP_812956 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.5
XP_821078 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 6.0
XP_807772 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 7.1
XP_001351564 PfEMP1 (Establishment) [Plasmodium falciparum] 24 8.2
XP_806381 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 8.3
XP_809580 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 9.8
>M.Javanica_Scaff1007g011971 on XP_809719 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 844
Score = 30.0 bits (66), Expect = 0.095, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 24/32 (75%)
Query: 65 ENKIVAEGGKKKKKKNKNKKIKQTFSDPNNKY 96
+ K+ EGG +K + N+N+++ +TFS+ N+++
Sbjct: 199 KGKVSGEGGNRKIQWNENQRLVRTFSEGNHEH 230
>M.Javanica_Scaff1007g011971 on XP_828104 VSG (Establishment) [Trypanosoma brucei]
Length = 501
Score = 25.4 bits (54), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 48 NTGELKLQEMPIYGQNN---ENKIVAEGGKKKKKKNKNKKIKQTFSDPNNKYSV-LSELN 103
+ L+ E+ + NN N+ V + K++ K+ KKI DP N Y+ +SELN
Sbjct: 311 DVAALQADEVMLEATNNLAMGNERVGDPTKREGKEAVAKKIAALAGDPTNFYATFVSELN 370
Query: 104 EE 105
++
Sbjct: 371 KQ 372
>M.Javanica_Scaff1007g011971 on XP_809960 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 890
Score = 25.4 bits (54), Expect = 2.6, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 18/26 (69%)
Query: 65 ENKIVAEGGKKKKKKNKNKKIKQTFS 90
+ K+ EGG +K + N+N+++ TFS
Sbjct: 201 KGKVSVEGGNRKIQWNENQRLVGTFS 226
>M.Javanica_Scaff1007g011971 on XP_001349522 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 355
Score = 25.0 bits (53), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 72 GGKKKKKKNKNKKIKQTFSDPNNKYSV 98
G K K N+ QT+SDP +K+++
Sbjct: 233 GTKHTKNITFNRVATQTYSDPIDKWTI 259
>M.Javanica_Scaff1007g011971 on XP_804686 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1045
Score = 25.0 bits (53), Expect = 3.7, Method: Composition-based stats.
Identities = 9/30 (30%), Positives = 19/30 (63%)
Query: 91 DPNNKYSVLSELNEEEEKKVLENKNEMKSK 120
+PN Y V+ +++++E V N+ E++ K
Sbjct: 626 EPNETYQVVLRMDDDDEWTVFVNRYEIRQK 655
>M.Javanica_Scaff1007g011971 on XP_001351561 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3553
Score = 25.0 bits (53), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 4/39 (10%)
Query: 105 EEEKKVLENKNEMKSKGK---EILLE-KECEECNEICDE 139
+E KK+ E ++ KSKGK E E KEC +C + C+E
Sbjct: 1535 QEYKKLEEKCSQCKSKGKGGNECYRETKECNDCKQACEE 1573
>M.Javanica_Scaff1007g011971 on XP_001348946 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3553
Score = 25.0 bits (53), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 4/39 (10%)
Query: 105 EEEKKVLENKNEMKSKGK---EILLE-KECEECNEICDE 139
+E KK+ E ++ KSKGK E E KEC +C + C+E
Sbjct: 1535 QEYKKLEEKCSQCKSKGKGGNECYRETKECNDCKQACEE 1573
>M.Javanica_Scaff1007g011971 on XP_812956 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1005
Score = 24.3 bits (51), Expect = 5.5, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 8/61 (13%)
Query: 64 NENKIVAEGGKKKKKKNKNKKIKQTFSDPNNKYSVLSELNEEE-----EKKVLENKNEMK 118
+E K +A G + K + +K +PN Y V+ +++ EE +KK + NK K
Sbjct: 564 HEKKWLAIPGNRATSKRVDNIVKW---EPNETYQVVLQMDYEEWTAIVDKKKIHNKRYKK 620
Query: 119 S 119
S
Sbjct: 621 S 621
>M.Javanica_Scaff1007g011971 on XP_821078 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 940
Score = 24.3 bits (51), Expect = 6.0, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 65 ENKIVAEGGKKKKKKNKNKKIKQTFSD 91
+ K+ A GKKK + N+N+++ T SD
Sbjct: 201 KGKVSAAEGKKKIQWNENQRLAGTLSD 227
>M.Javanica_Scaff1007g011971 on XP_807772 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 852
Score = 23.9 bits (50), Expect = 7.1, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 61 GQNNENKIVAEGGKKKKKKNKNKKIKQTFSDPNNKYSVLSELNEEEEKKVLENKNEMKSK 120
GQ++ I ++ + ++K N + + +D N K VL E KKV ++ K
Sbjct: 113 GQDSFTGIASQLLTETEEKKDNTPV-EVLNDANTKTQVLEEGTSPHSKKVDVSRPTTAVK 171
Query: 121 GKEILL 126
G +I +
Sbjct: 172 GNDIYM 177
>M.Javanica_Scaff1007g011971 on XP_001351564 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2207
Score = 23.9 bits (50), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 45 SYKNTGELKLQEMPIYGQNNENKIVAE-GGKKKKKKNKNKKIKQ 87
S NT + +E P +N IV E GG +K K K K+I+Q
Sbjct: 1053 SSSNTSDTTGKETPSSSNDNLKNIVIEAGGTDEKDKQKMKEIQQ 1096
>M.Javanica_Scaff1007g011971 on XP_806381 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1045
Score = 23.9 bits (50), Expect = 8.3, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 41/96 (42%), Gaps = 12/96 (12%)
Query: 16 LNLFIVEAINPLANALGSVP---QASVPISAESYKNTGELKLQEMPIYGQNN------EN 66
++LF ++ ++ AN G+ ++ I Y G + + G N +
Sbjct: 150 VSLFCMQLVDTAANNFGTTELLRPTTLVIGDSVYVLLGNYSRTKPQVEGTNERGLLLVKG 209
Query: 67 KIVAEGGKKKKKKNKNKKIKQTFSDPNNKYSVLSEL 102
+ EGGKKK K N+ +K +P + L+EL
Sbjct: 210 TVADEGGKKKIKWNETHVVK---PEPKGESHSLTEL 242
>M.Javanica_Scaff1007g011971 on XP_809580 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 776
Score = 23.5 bits (49), Expect = 9.8, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 17/24 (70%)
Query: 72 GGKKKKKKNKNKKIKQTFSDPNNK 95
G +K+ + N+N+++ TFSD +K
Sbjct: 228 GSEKRIQWNENQRLTGTFSDDEHK 251
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1010g012016
(83 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609751 variant erythrocyte surface antigen-1, alpha subun... 28 0.045
XP_829798 VSG (Establishment) [Trypanosoma brucei] 26 0.28
XP_001609755 variant erythrocyte surface antigen-1, beta subuni... 25 0.89
XP_818270 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.5
XP_820303 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.4
XP_805613 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.4
XP_001351517 PfEMP1 (Establishment) [Plasmodium falciparum] 22 5.3
XP_828094 VSG (Establishment) [Trypanosoma brucei] 22 5.6
XP_001609101 variant erythrocyte surface antigen-1, alpha subun... 22 8.3
XP_803400 VSG (Establishment) [Trypanosoma brucei] 22 8.4
XP_001350415 PfEMP1 (Establishment) [Plasmodium falciparum] 22 8.5
CAB56644 MIC3 (Adhesin) [Toxoplasma gondii] 22 8.5
XP_001609163 variant erythrocyte surface antigen-1, alpha subun... 22 9.4
>M.Javanica_Scaff1010g012016 on XP_001609751 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1298
Score = 28.1 bits (61), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
Query: 29 GHQCGKNSDCCANHCGSNKKCCIASGGVCTGNANKCCPGTGCQ 71
GH G+ C++ GS KC SGG CTG PG CQ
Sbjct: 141 GHHLGRRCQRCSDSGGSTCKCSGTSGGACTG------PGQECQ 177
>M.Javanica_Scaff1010g012016 on XP_829798 VSG (Establishment) [Trypanosoma brucei]
Length = 482
Score = 25.8 bits (55), Expect = 0.28, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 19/52 (36%), Gaps = 6/52 (11%)
Query: 4 SSTKICLFFLSIFVLFKLNDACFGYGHQCGKNSDCCANHCGSNKKCCIASGG 55
++T + + L LFKL + H N C HC K C A
Sbjct: 185 AATGVAISALKTLTLFKLKE------HSTPGNRQICLGHCDGQGKACTAQAA 230
>M.Javanica_Scaff1010g012016 on XP_001609755 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 920
Score = 24.6 bits (52), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 6/48 (12%)
Query: 25 CFGYGHQCGKNSDCCANHCGSNKKCCIASGGVCTGNANKCCPGTGCQP 72
G+ + GK+ C G KKC C+G A +CC G+ P
Sbjct: 130 WVGWKEEKGKDVCCLKGESGIGKKC------TCSGGAGQCCTGSSNTP 171
>M.Javanica_Scaff1010g012016 on XP_818270 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 380
Score = 23.1 bits (48), Expect = 2.5, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 4/59 (6%)
Query: 12 FLSIFVLFKLNDACFGYGHQCGKNSDCCANHCGSNKKCCIASGGVCTGNANKCCPGTGC 70
F+S+ LF CF + GK+ C C + + CI GGV C G C
Sbjct: 124 FISVKKLFY---RCFSTECKYGKDEKC-KRECRNFEAKCIGMGGVFVFTPTPCNVGEVC 178
>M.Javanica_Scaff1010g012016 on XP_820303 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 873
Score = 22.7 bits (47), Expect = 3.4, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 62 NKCCPGTGCQPPGDLGHEYKCQ 83
N+ GT QPPG G E + Q
Sbjct: 733 NEPSQGTAIQPPGGQGKEEQRQ 754
>M.Javanica_Scaff1010g012016 on XP_805613 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 874
Score = 22.7 bits (47), Expect = 3.4, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 62 NKCCPGTGCQPPGDLGHEYKCQ 83
N+ GT QPPG G E + Q
Sbjct: 734 NEPSQGTAIQPPGGQGKEEQRQ 755
>M.Javanica_Scaff1010g012016 on XP_001351517 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2193
Score = 22.3 bits (46), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 11 FFLSIFVLFKLNDACFGYGHQCG--KN-SDCCANHCGSNKKCCI 51
FF V F LND+ + G G KN S+ C N C +N KC +
Sbjct: 633 FFYFWIVRF-LNDSMYWRGKIGGCLKNKSEKCKNECNTNCKCFL 675
>M.Javanica_Scaff1010g012016 on XP_828094 VSG (Establishment) [Trypanosoma brucei]
Length = 483
Score = 22.3 bits (46), Expect = 5.6, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 23 DACFGYGHQCGKNSDCCANHCGSNKKCCIAS 53
+AC G QC +S+ NH + +K C S
Sbjct: 245 NACDNSGIQCDWSSNNMNNHIATVRKKCPTS 275
>M.Javanica_Scaff1010g012016 on XP_001609101 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1359
Score = 21.9 bits (45), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 59 GNANKCCPGTGCQPPGDLGHEYKC 82
G++N+ TGC+ D+ HE KC
Sbjct: 137 GSSNEHGEKTGCEYLQDVKHENKC 160
>M.Javanica_Scaff1010g012016 on XP_803400 VSG (Establishment) [Trypanosoma brucei]
Length = 483
Score = 21.6 bits (44), Expect = 8.4, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 19/51 (37%), Gaps = 4/51 (7%)
Query: 27 GYGHQCGKNSDCCANHCGSNKKCCIASGGVCTGNANKCCPGTGCQPPGDLG 77
G G QC N ++ CIA G V + + GT GD G
Sbjct: 218 GNGQQCDVNGGTNKQFTVTSSHVCIAGGPVFSAAQKQLDAGTS----GDYG 264
>M.Javanica_Scaff1010g012016 on XP_001350415 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3056
Score = 21.9 bits (45), Expect = 8.5, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 9/20 (45%)
Query: 46 NKKCCIASGGVCTGNANKCC 65
N K C SGG C G C
Sbjct: 782 NCKSCKESGGTCNGECKTEC 801
>M.Javanica_Scaff1010g012016 on CAB56644 MIC3 (Adhesin) [Toxoplasma gondii]
Length = 255
Score = 21.6 bits (44), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 24 ACFGYGHQCGKNSDCCAN 41
+C GH+C KN++C N
Sbjct: 146 SCEKQGHRCDKNAECVEN 163
>M.Javanica_Scaff1010g012016 on XP_001609163 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1360
Score = 21.6 bits (44), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 59 GNANKCCPGTGCQPPGDLGHEYKC 82
G++N+ TGC+ D+ HE KC
Sbjct: 137 GSSNEHGEKTGCEYLQDVKHENKC 160
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10118g057768
(100 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351079 PfEMP1 (Establishment) [Plasmodium falciparum] 26 0.37
XP_829777 VSG (Establishment) [Trypanosoma brucei] 26 0.39
XP_807772 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.3
>M.Javanica_Scaff10118g057768 on XP_001351079 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2203
Score = 26.2 bits (56), Expect = 0.37, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 14/34 (41%)
Query: 23 PPTPPPELNNSTKNSTNAIDQITLTRPCPESYSK 56
P P LN T DQ LT+ C + Y K
Sbjct: 885 PTATDPSLNVCTTVDKALTDQTNLTKACQQKYEK 918
>M.Javanica_Scaff10118g057768 on XP_829777 VSG (Establishment) [Trypanosoma brucei]
Length = 521
Score = 26.2 bits (56), Expect = 0.39, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 4/51 (7%)
Query: 28 PELNNSTKNSTNAIDQITLTRP-CPESYSKYCY---NRGKCYAAWTGKGNY 74
P NN TNAI I + +P PE + N +C T KG Y
Sbjct: 248 PTYNNGNIGGTNAIGAIIIPKPHAPEMAPNSLFTSENSQECVQPTTDKGPY 298
>M.Javanica_Scaff10118g057768 on XP_807772 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 852
Score = 23.9 bits (50), Expect = 2.3, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 9/45 (20%)
Query: 19 KALPPPTPPPELNNSTKNSTNAIDQITLTRPCPESYSKYCYNRGK 63
K PP T P E + Q TL RP ES +K GK
Sbjct: 757 KKAPPATKPSEA---------PVVQATLQRPRQESEAKQVTTVGK 792
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10099g057704
(106 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_814753 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.2
XP_820670 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.2
XP_821669 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 10.0
>M.Javanica_Scaff10099g057704 on XP_814753 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 882
Score = 23.5 bits (49), Expect = 3.2, Method: Composition-based stats.
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 20 IVCSANNEQHNSLLETKTQ 38
++C N +H+S ET+TQ
Sbjct: 617 VLCGGENTEHSSNWETETQ 635
>M.Javanica_Scaff10099g057704 on XP_820670 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 883
Score = 23.5 bits (49), Expect = 3.2, Method: Composition-based stats.
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 20 IVCSANNEQHNSLLETKTQ 38
++C N +H+S ET+TQ
Sbjct: 618 VLCGGENTEHSSNWETETQ 636
>M.Javanica_Scaff10099g057704 on XP_821669 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 879
Score = 22.3 bits (46), Expect = 10.0, Method: Composition-based stats.
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 26 NEQHNSLLETKTQNN 40
N++H+S LETKT +
Sbjct: 612 NKEHSSYLETKTSKH 626
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff100g001913
(230 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ACB87908 Rh5 (Adhesin) [Plasmodium falciparum] 25 4.5
XP_001351513 PfEMP1 (Establishment) [Plasmodium falciparum] 25 6.1
XP_001351514 PfEMP1 (Establishment) [Plasmodium falciparum] 25 6.2
>M.Javanica_Scaff100g001913 on ACB87908 Rh5 (Adhesin) [Plasmodium falciparum]
Length = 526
Score = 25.0 bits (53), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 196 ADHLCEFLWRR--DAKRHEKDTFNHLITIIAKQFN 228
+DHL + L+ ++H + F+HLI ++ +FN
Sbjct: 472 SDHLRQMLYNTFYSKEKHLNNIFHHLIYVLQMKFN 506
>M.Javanica_Scaff100g001913 on XP_001351513 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2152
Score = 24.6 bits (52), Expect = 6.1, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 104 NELRLEICPDNKRDKDTLLSLITKHVR--PDSTIFTDFWRGYADL 146
++L +++C + +L+ +H R PDS I T+ R +AD+
Sbjct: 151 HDLLVDVCMAANYEAQSLIRDHPQHKRTNPDSKICTELARSFADI 195
>M.Javanica_Scaff100g001913 on XP_001351514 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2201
Score = 24.6 bits (52), Expect = 6.2, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 104 NELRLEICPDNKRDKDTLLSLITKHVR--PDSTIFTDFWRGYADL 146
++L +++C + +L+ +H R PDS I T+ R +AD+
Sbjct: 151 HDLLVDVCMAANYEAQSLIRDHPQHKRTNPDSKICTELARSFADI 195
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10143g057867
(128 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_805084 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.5
XP_818396 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.5
ACB87908 Rh5 (Adhesin) [Plasmodium falciparum] 24 2.9
XP_802237 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.8
>M.Javanica_Scaff10143g057867 on XP_805084 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 828
Score = 25.0 bits (53), Expect = 1.5, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
Query: 84 SSFRHLNETHYHHDEHIHRKVMGGHGVEEGQLPW 117
S++R LN +DEH H + G G G + W
Sbjct: 566 STWRELN---LWYDEHKHWRTEAGEGKGAGTIAW 596
>M.Javanica_Scaff10143g057867 on XP_818396 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1044
Score = 25.0 bits (53), Expect = 1.5, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
Query: 84 SSFRHLNETHYHHDEHIHRKVMGGHGVEEGQLPW 117
S++R LN +DEH H + G G G + W
Sbjct: 566 STWRELN---LWYDEHKHWRTEAGEGKGAGTIAW 596
>M.Javanica_Scaff10143g057867 on ACB87908 Rh5 (Adhesin) [Plasmodium falciparum]
Length = 526
Score = 24.3 bits (51), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 9/24 (37%), Positives = 17/24 (70%)
Query: 83 NSSFRHLNETHYHHDEHIHRKVMG 106
N++F + N YH+DE+IH+ ++
Sbjct: 347 NNNFCNTNGIRYHYDEYIHKLILS 370
>M.Javanica_Scaff10143g057867 on XP_802237 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 364
Score = 23.9 bits (50), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Query: 83 NSSFRHLNETHYHHDEHIHRKVMGGHGVEEGQLPW 117
S++R LN +DEH H + G G G + W
Sbjct: 125 GSTWRELN---LWYDEHKHWRTEAGEGKGAGTIAW 156
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10052g057556
(155 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_951521 VSG (Establishment) [Trypanosoma brucei] 23 6.4
>M.Javanica_Scaff10052g057556 on XP_951521 VSG (Establishment) [Trypanosoma brucei]
Length = 444
Score = 23.5 bits (49), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 18/44 (40%), Gaps = 10/44 (22%)
Query: 105 QPFIYNG----------CEGNDNRFESASACRKACSSSEKRDPW 138
QP ++ G C G+ + AC + CS+ DPW
Sbjct: 192 QPSVWAGKSLIVDLLCICGGSPMPNDRQQACCEGCSTGANEDPW 235
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10164g057929
(84 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_650156 CP1 (Cysteine protease) [Entamoeba histolytica] 23 3.9
XP_814156 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 6.0
>M.Javanica_Scaff10164g057929 on XP_650156 CP1 (Cysteine protease) [Entamoeba histolytica]
Length = 315
Score = 22.7 bits (47), Expect = 3.9, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Query: 15 CLYSLKVLAKDPPYGRLSVNNKGQLVGSKGQEVQLRGISLFGNQYQPEFYSEQVVRAVKC 74
C +K AK Y R++ NN+ +L + Q L +S+ + Q + Y +C
Sbjct: 193 CRSDVKAFAKIKSYNRVARNNEVELKAAISQ--GLVDVSIDASSVQFQLYKSGAYTDKQC 250
Query: 75 FYN 77
N
Sbjct: 251 KNN 253
>M.Javanica_Scaff10164g057929 on XP_814156 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 759
Score = 22.3 bits (46), Expect = 6.0, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 14 LCLYSLKVLAKDPPYGRLSVNNKGQL 39
+ LY K A+ PP G +SV QL
Sbjct: 426 IALYEKKGDAEKPPLGMVSVRLTAQL 451
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10052g057558
(176 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum] 26 2.0
AAL38218 PfNBP1 (Adhesin) [Plasmodium falciparum] 26 2.0
XP_809902 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.3
XP_809850 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.7
XP_815148 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 9.5
>M.Javanica_Scaff10052g057558 on AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2969
Score = 25.8 bits (55), Expect = 2.0, Method: Composition-based stats.
Identities = 12/47 (25%), Positives = 20/47 (42%)
Query: 52 NRADNGEEEEYDGGAHPLQQPCHTQRATTTSTAFTTTSQQYGCHRRV 98
N+ D+ + +E D H L H Q++ Q+ G H R+
Sbjct: 2850 NQKDSTKLQEQDISTHKLHNTIHEQQSKDNHQGNREKKQKNGNHERM 2896
>M.Javanica_Scaff10052g057558 on AAL38218 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2977
Score = 25.8 bits (55), Expect = 2.0, Method: Composition-based stats.
Identities = 12/47 (25%), Positives = 20/47 (42%)
Query: 52 NRADNGEEEEYDGGAHPLQQPCHTQRATTTSTAFTTTSQQYGCHRRV 98
N+ D+ + +E D H L H Q++ Q+ G H R+
Sbjct: 2858 NQKDSTKLQEQDISTHKLHNTIHEQQSKDNHQGNREKKQKNGNHERM 2904
>M.Javanica_Scaff10052g057558 on XP_809902 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 955
Score = 25.0 bits (53), Expect = 3.3, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 5/63 (7%)
Query: 28 PSTS-CRPSGPLLAGAAPRRDRGSSNRADNGEEEEYDGGAHPLQQPCHTQRATTTSTAFT 86
PS S P G AG +RG + A+ GE + DG QQP AT + A T
Sbjct: 819 PSASGTSPEGHPNAGVDSSSERGQTVDAETGEMVQGDG----TQQPSVGTPATADTNAPT 874
Query: 87 TTS 89
+
Sbjct: 875 AET 877
>M.Javanica_Scaff10052g057558 on XP_809850 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 915
Score = 24.6 bits (52), Expect = 3.7, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 11/49 (22%)
Query: 23 TSRGVPSTSCRPSGPLLAGAAPRRDRGSSNRADNGEEEEYDGGAHPLQQ 71
T VPS S P PL+A A + G+S+ D G HP +Q
Sbjct: 753 TPSPVPSASVVPPTPLVAATA--QQTGNSSTPD---------GTHPTEQ 790
>M.Javanica_Scaff10052g057558 on XP_815148 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 882
Score = 23.5 bits (49), Expect = 9.5, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 26/68 (38%), Gaps = 7/68 (10%)
Query: 26 GVPSTSCRPS-----GPLLAGAAPRRDRGSSNRADNGEEEEYDGGAHPLQQPCHTQRATT 80
G PS P+ G + G + G S +G + E GG Q+ H Q
Sbjct: 781 GTPSPDADPTVVTVGGETVQGDGSLQTPGVS--VSSGADGETAGGTDVQQEGIHAQAGEV 838
Query: 81 TSTAFTTT 88
T+TA +
Sbjct: 839 TATALNNS 846
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10060g057585
(237 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_811309 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.52
XP_812697 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.8
XP_818689 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.0
XP_816823 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.9
XP_804820 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 5.1
XP_821088 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.8
ABB59608 CSP (Invasion) [Plasmodium falciparum] 23 7.5
ABB59609 CSP (Invasion) [Plasmodium falciparum] 23 7.5
>M.Javanica_Scaff10060g057585 on XP_811309 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1033
Score = 28.1 bits (61), Expect = 0.52, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 98 FDDWEEKREFIYLKKFEIKDRFVVKVIEKKNNQHDGFNKNI 138
FDDWE R + + + + D + V ++ K H ++KN+
Sbjct: 608 FDDWEPNRTYQVVLRMDDDDEWTV-FVDGKQIDHKRYDKNL 647
>M.Javanica_Scaff10060g057585 on XP_812697 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 911
Score = 26.2 bits (56), Expect = 1.8, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 129 NQHDGFNKNIEV-FLRSIDLNINKNMFEVEIGDRSEYITSDQLKKKIL-IEITNNEIIQN 186
N+H+G K++ F+ + N NK + + + ++ D +K +L + +T+N I +
Sbjct: 364 NKHEGNEKSVRSGFITATVGNDNKKVMLITLPVYAKKAEKDNEEKGVLHLWLTDNTHIVD 423
Query: 187 FMPGFEKMVLRNNNFIKNNNCYATSIFYKSEKNNN 221
P +K +++ A+S+ YK NNN
Sbjct: 424 IGPVSKK----------DHDVAASSLLYKGGDNNN 448
>M.Javanica_Scaff10060g057585 on XP_818689 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 844
Score = 26.2 bits (56), Expect = 2.0, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 12/76 (15%)
Query: 150 NKNMFEVEIGDRSEYITSDQLKKKILIEITNNEIIQNFMPGFEKMVLRNNNFIKNNNCYA 209
N+N+ V + S+ + K K+ + +T+N I + P + +++ A
Sbjct: 394 NRNVMLVTLPVYSKKDKKEIRKGKLHLWLTDNTHIVDIGP------------VSDDDAAA 441
Query: 210 TSIFYKSEKNNNFKLI 225
+++ YK NNN KLI
Sbjct: 442 SALLYKGGNNNNEKLI 457
>M.Javanica_Scaff10060g057585 on XP_816823 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 772
Score = 25.4 bits (54), Expect = 3.9, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 204 NNNCYATSIFYKSEKNNNFKLI 225
+++ A+S+ YKS NNN +LI
Sbjct: 415 DDDAAASSLLYKSGNNNNERLI 436
>M.Javanica_Scaff10060g057585 on XP_804820 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 954
Score = 25.0 bits (53), Expect = 5.1, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 203 KNNNCYATSIFYKSEKNNN--FKLIEESKE 230
K + A+S+ YKS NNN L E+ KE
Sbjct: 431 KEEDAAASSLLYKSGNNNNKLIALYEKKKE 460
>M.Javanica_Scaff10060g057585 on XP_821088 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 910
Score = 24.6 bits (52), Expect = 6.8, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 45/97 (46%), Gaps = 14/97 (14%)
Query: 129 NQHDGFNKNI-EVFLRSIDLNINKNMFEVEI---GDRSEYITSDQLKKKILIEITNNEII 184
N+H+G K + F+ + N NK + + + ++E + K ++ + +T+N I
Sbjct: 361 NKHEGNEKGVGSGFITATVGNDNKKVMLITLPVYAKKAEKDNKNNEKGELRLWLTDNTHI 420
Query: 185 QNFMPGFEKMVLRNNNFIKNNNCYATSIFYKSEKNNN 221
+ P +K +++ A+S+ YK NNN
Sbjct: 421 VDIGPVSKK----------DHDVAASSLLYKGGDNNN 447
>M.Javanica_Scaff10060g057585 on ABB59608 CSP (Invasion) [Plasmodium falciparum]
Length = 77
Score = 23.1 bits (48), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 60 KKNNQHDGFNKNIEVFLRSIDLNXPLYFSFCFIRL 94
K NN + +K+IE +LR+I + +S C +
Sbjct: 1 KNNNNEEPSDKHIEQYLRNIQNSLSTEWSPCSVTC 35
>M.Javanica_Scaff10060g057585 on ABB59609 CSP (Invasion) [Plasmodium falciparum]
Length = 77
Score = 23.1 bits (48), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 60 KKNNQHDGFNKNIEVFLRSIDLNXPLYFSFCFIRL 94
K NN + +K+IE +LR+I + +S C +
Sbjct: 1 KNNNNEEPSDKHIEQYLRNIQNSLSTEWSPCSVTC 35
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10018g057453
(61 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10114g057757
(96 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_817149 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.1
XP_844697 VSG (Establishment) [Trypanosoma brucei] 22 7.1
XP_655415 Hgl (Adhesin) [Entamoeba histolytica] 22 8.6
>M.Javanica_Scaff10114g057757 on XP_817149 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 779
Score = 23.5 bits (49), Expect = 3.1, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 26 HSSGKHYGIYSCDGCAGFFKRSVRRHRQY 54
+ SGK + CDG K + RQY
Sbjct: 601 YGSGKKWQALCCDGTTKRLKSTWEPQRQY 629
>M.Javanica_Scaff10114g057757 on XP_844697 VSG (Establishment) [Trypanosoma brucei]
Length = 342
Score = 22.3 bits (46), Expect = 7.1, Method: Composition-based stats.
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 26 HSSGKHYGIYSCDG 39
+ GK YG+++C+G
Sbjct: 198 YGGGKEYGLHTCNG 211
>M.Javanica_Scaff10114g057757 on XP_655415 Hgl (Adhesin) [Entamoeba histolytica]
Length = 1291
Score = 22.3 bits (46), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 12/83 (14%)
Query: 20 CRVCQDHSSGKHYGIYSCDGCAGFFKRSVRRH----------RQYVCKNKGGGLLEDNCP 69
C Q SS + Y+CD GF K+ R ++YVC K + D
Sbjct: 497 CEADQKPSSDGYCWSYTCDQTTGFCKKDKRGENMCTGKTNNCQEYVCDEKQRCSVRDKVC 556
Query: 70 VDKTHRNQCRACRLQKC-LDIGM 91
V KT +C + KC L+ GM
Sbjct: 557 V-KTSPYIEMSCYVAKCNLNTGM 578
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10137g057841
(69 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001348153 MAEBL (Adhesin) [Plasmodium falciparum] 26 0.19
XP_001347690 PfEMP1 (Establishment) [Plasmodium falciparum] 23 1.3
>M.Javanica_Scaff10137g057841 on XP_001348153 MAEBL (Adhesin) [Plasmodium falciparum]
Length = 2054
Score = 25.8 bits (55), Expect = 0.19, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Query: 4 SHSLFTRNSFKLSILPIWPRFSFRTDRSGRSLM----ASTTNWSGFWSNNR 50
S ++ T NSF L+ I+P + + G SL+ TN + NN+
Sbjct: 422 SFTILTANSFNLNQNIIYPELKNNSSKEGSSLIHFKDPKQTNKRVLYENNK 472
>M.Javanica_Scaff10137g057841 on XP_001347690 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 23.5 bits (49), Expect = 1.3, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 45 FWSNNRLITSSSLSIGCPTWA 65
+W+NNRL+ +++ G P A
Sbjct: 251 WWNNNRLMVWYAITCGAPKEA 271
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff100g001903
(189 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_828094 VSG (Establishment) [Trypanosoma brucei] 26 1.8
XP_001612315 variant erythrocyte surface antigen-1, beta subuni... 26 2.0
XP_001610721 variant erythrocyte surface antigen-1, alpha subun... 25 3.1
AAM47175 Rh4 (Adhesin) [Plasmodium falciparum] 24 5.9
AAM47174 Rh4 (Adhesin) [Plasmodium falciparum] 24 5.9
AAM47192 Rh4 (Adhesin) [Plasmodium falciparum] 24 6.0
XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum] 24 7.0
>M.Javanica_Scaff100g001903 on XP_828094 VSG (Establishment) [Trypanosoma brucei]
Length = 483
Score = 25.8 bits (55), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 104 HFGFGGPKKEENIVKENEKLNGNKEKETEEFEKVEEGNEEDNEEDRLFTRIA 155
H+G GG K N + KLN E EE EK + E+ +E R+ A
Sbjct: 330 HYGAGGTKSGVNSIPWIVKLNDAIE-TMEEMEKNAQKAREEAKEIRMLIAAA 380
>M.Javanica_Scaff100g001903 on XP_001612315 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1140
Score = 25.8 bits (55), Expect = 2.0, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 10/56 (17%)
Query: 105 FGFGGPKKEENIVKENEKLNGNKEKETEEFEKVEEGNEEDNEEDRLFTRIANWFKQ 160
FG+G N+ + ++ GN +K+ EF EG ++ E FT++ N Q
Sbjct: 1022 FGYG------NVTELHKTQVGNAQKKCHEFLSTLEGVKDSGE----FTKLTNSINQ 1067
>M.Javanica_Scaff100g001903 on XP_001610721 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1331
Score = 25.0 bits (53), Expect = 3.1, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 13/72 (18%)
Query: 102 YQH-FGFGGP------------KKEENIVKENEKLNGNKEKETEEFEKVEEGNEEDNEED 148
Y+H F +G P K + +I + ++K + + E EKV E +ED +D
Sbjct: 1183 YRHGFSYGNPFNLEGYQQRDKDKGDYSITERSDKTTKHCHEFLESLEKVLEDKQEDTSQD 1242
Query: 149 RLFTRIANWFKQ 160
T + + Q
Sbjct: 1243 HPLTNLLSQVGQ 1254
>M.Javanica_Scaff100g001903 on AAM47175 Rh4 (Adhesin) [Plasmodium falciparum]
Length = 1711
Score = 24.3 bits (51), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 90 NKHLLGGYYDQKY-QHFGFGGPKKEENIVKENEKLNGNKEKETEEFEKVEE 139
N H+L + D KY +H ENI+K+NE K +T + ++E
Sbjct: 1139 NNHMLSIFQDTKYGKHKNQQILSDIENIIKQNEHTESYKNLDTSNIQLIKE 1189
>M.Javanica_Scaff100g001903 on AAM47174 Rh4 (Adhesin) [Plasmodium falciparum]
Length = 1711
Score = 24.3 bits (51), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 90 NKHLLGGYYDQKY-QHFGFGGPKKEENIVKENEKLNGNKEKETEEFEKVEE 139
N H+L + D KY +H ENI+K+NE K +T + ++E
Sbjct: 1137 NNHMLSIFQDTKYGKHKNQQILSDIENIIKQNEHTESYKNLDTSNIQLIKE 1187
>M.Javanica_Scaff100g001903 on AAM47192 Rh4 (Adhesin) [Plasmodium falciparum]
Length = 1716
Score = 24.3 bits (51), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 90 NKHLLGGYYDQKY-QHFGFGGPKKEENIVKENEKLNGNKEKETEEFEKVEE 139
N H+L + D KY +H ENI+K+NE K +T + ++E
Sbjct: 1138 NNHMLSIFQDTKYGKHKNQQILSDIENIIKQNEHTESYKNLDTSNIQLIKE 1188
>M.Javanica_Scaff100g001903 on XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum]
Length = 3130
Score = 24.3 bits (51), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 12/66 (18%)
Query: 24 FSAFFQKIK------NNILGEESGISGN------NVDDNHQNNLEPFSNINNPNQFNEKN 71
+ A+F K+K N + E +G+ + VD + NL+ FSN+ N ++ EK
Sbjct: 1301 YKAYFDKLKDLYENINKLTNESNGLKSDAHNNNTQVDKLKEINLQVFSNLGNIIKYVEKL 1360
Query: 72 ENFVTE 77
EN + E
Sbjct: 1361 ENTLHE 1366
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10123g057782
(51 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1003g011933
(874 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_821388 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 2.0
XP_813740 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 3.5
XP_818002 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 5.2
XP_001351876 PfEMP1 (Establishment) [Plasmodium falciparum] 27 9.2
>M.Javanica_Scaff1003g011933 on XP_821388 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 907
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/108 (21%), Positives = 44/108 (40%), Gaps = 1/108 (0%)
Query: 599 LLFNDSMAEMETHLSKMNELKTDFLSEKLEEEYANLKDRITKGIEEEIEEGEEEGENKME 658
LL+N +++ E + N++ L +K E D + + ++ G
Sbjct: 715 LLYNRPLSDNEIGVLNPNKVAIQHLKDKSSEPSTVSSDSVNPNTSPATADAQQTGTLSTP 774
Query: 659 EGPHQLLKEKIVGASSRMEGPQQTSKEKIVATIFES-NSTLFITSKTS 705
+G H + + +G+S+ G T+ + T S L +TS TS
Sbjct: 775 DGKHLTEQGQSMGSSNAGSGGASTTAVSAITTPSAGEESVLQVTSGTS 822
>M.Javanica_Scaff1003g011933 on XP_813740 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 717
Score = 27.7 bits (60), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 8/61 (13%)
Query: 465 CAGGVNDKIREKYLGEICYFWEQAIKSPPTLPRAWDVVRNGGCWSVNWVVGPSIREAPII 524
CAGG K+ E ++ W +A+ TLP W R+G W+++ VG S+ A I
Sbjct: 329 CAGG--RKVYESL--DMGRTWTEAVG---TLPGVWINSRSGARWAIDLSVG-SLTTATIE 380
Query: 525 G 525
G
Sbjct: 381 G 381
>M.Javanica_Scaff1003g011933 on XP_818002 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 728
Score = 26.9 bits (58), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Query: 484 FWEQAIKSPPTLPRAWDVVRNGGCWSVNWVVGPSIREAPIIG 525
W +AI TLP AW R+GG W VG SI A I G
Sbjct: 349 MWTEAIG---TLPGAWVDSRSGGSWDRTLRVG-SIITATIEG 386
>M.Javanica_Scaff1003g011933 on XP_001351876 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3164
Score = 26.6 bits (57), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Query: 255 MKLEGTLKKIFELSKIQSKELDKAINEKIYEEHLKNKAMENLDRKEYKNAIVEGAGPVGL 314
+KLE LKKIF+ K ++ EL K EK+ E + RKE A+ A
Sbjct: 221 IKLEENLKKIFDNIKNENAELSKLSLEKVREYWWA------IHRKELWEALTCNAPKGAN 274
Query: 315 YATYKL 320
Y YKL
Sbjct: 275 YFVYKL 280
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10123g057784
(323 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ACB87908 Rh5 (Adhesin) [Plasmodium falciparum] 26 3.3
XP_815119 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.9
XP_805195 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 5.4
XP_805196 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.2
>M.Javanica_Scaff10123g057784 on ACB87908 Rh5 (Adhesin) [Plasmodium falciparum]
Length = 526
Score = 26.2 bits (56), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 28/111 (25%)
Query: 10 LIISIIFLFLLFLNKPFGLCKELKSLQKRNLLFPNFLLKNRNEGSN-------QVEEEK- 61
LI++II++ L LN+ L F N + K +N+ +N EEEK
Sbjct: 8 LILTIIYIHLFILNR---------------LSFENAIKKTKNQENNLTLLPIKSTEEEKD 52
Query: 62 -----KIMPRSVDNLEDENEDNNIEVESPLIDSSDNENILKSIRRPSSPSR 107
K + + +DN ++ + NN + S I S N N+ ++ PS
Sbjct: 53 DIKNGKDIKKEIDNDKENIKTNNAKDHSTYIKSYLNTNVNDGLKYLFIPSH 103
>M.Javanica_Scaff10123g057784 on XP_815119 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 380
Score = 25.4 bits (54), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 216 NQLFSSLFVKVENNQNGQKMNNVPNLKAALEQLLRNA--QGRKL 257
N+ FS V V+NN+N +N+P AL L A +GR +
Sbjct: 144 NRTFSVWPVAVDNNKNWDLASNLPYSDGALHLLKERANEKGRAI 187
>M.Javanica_Scaff10123g057784 on XP_805195 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 769
Score = 25.4 bits (54), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 28/71 (39%)
Query: 19 LLFLNKPFGLCKELKSLQKRNLLFPNFLLKNRNEGSNQVEEEKKIMPRSVDNLEDENEDN 78
L F++ FG C E Q+ ++ N L NR S ++ K +P E E E
Sbjct: 673 LEFVDLCFGACGEENPSQESHVTVTNVFLYNRPLNSTEMRAIKDRVPVPTRGPESEVEGG 732
Query: 79 NIEVESPLIDS 89
P ID
Sbjct: 733 TERRHIPRIDG 743
>M.Javanica_Scaff10123g057784 on XP_805196 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 731
Score = 25.0 bits (53), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 28/71 (39%)
Query: 19 LLFLNKPFGLCKELKSLQKRNLLFPNFLLKNRNEGSNQVEEEKKIMPRSVDNLEDENEDN 78
L F++ FG C E Q+ ++ N L NR S ++ K +P E E E
Sbjct: 635 LEFVDLCFGACGEENPSQESHVTVTNVFLYNRPLNSTEMRAIKDRVPVPTRGPESEVEGG 694
Query: 79 NIEVESPLIDS 89
P ID
Sbjct: 695 TERRHIPRIDG 705
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1014g012037
(117 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10020g057463
(408 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_954179 TashAT2 (Establishment) [Theileria annulata] 28 1.3
ABA06442 MSA-2a/b (Invasion) [Babesia bovis] 27 1.8
ABA06438 MSA-2a/b (Invasion) [Babesia bovis] 27 2.0
XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum] 26 4.5
>M.Javanica_Scaff10020g057463 on XP_954179 TashAT2 (Establishment) [Theileria annulata]
Length = 1161
Score = 27.7 bits (60), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 137 INDVENLIIERERKNTKNIKRRRLADEPINDNKREDKIEEEINFHNYNSYSQMVA 191
I+D++ LI E T+ + +R+L D +R+DK E E + N + +Q +A
Sbjct: 239 ISDIDPLISSDEEIETEKVDKRKLK----GDRQRKDKQESEQHDKNVDIVAQALA 289
>M.Javanica_Scaff10020g057463 on ABA06442 MSA-2a/b (Invasion) [Babesia bovis]
Length = 267
Score = 26.9 bits (58), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 109 IDIMLPKE--KLLLLQHYLNKHKINNFNIIINDVENLIIERERKNTKNIKRRRLADE 163
+D+ P + KLLLL+ L K K++ FN+ +ND ++ E + ++ + E
Sbjct: 103 LDLQDPDQIFKLLLLRVPLIKTKLSAFNVFLNDNPPRMLANESGEMTDYYKKHICKE 159
>M.Javanica_Scaff10020g057463 on ABA06438 MSA-2a/b (Invasion) [Babesia bovis]
Length = 267
Score = 26.9 bits (58), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 109 IDIMLPKE--KLLLLQHYLNKHKINNFNIIINDVENLIIERERKNTKNIKRRRLADE 163
+D+ P + KLLLL+ L K K++ FN+ +ND ++ E + ++ + E
Sbjct: 103 LDLQDPDQIFKLLLLRVPLIKTKLSAFNVFLNDNPPRMLANESGEMTDYYKKHICKE 159
>M.Javanica_Scaff10020g057463 on XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum]
Length = 3130
Score = 26.2 bits (56), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 29 LVISTEINELIEEEEGGNKKELKPNNLFKNSSFSSSTNSFVVIR 72
L + E+NE+I+E E KK L N L N S TN V I+
Sbjct: 2958 LNLKRELNEIIKEYEENQKKILHSNQLV-NDSLEQKTNRLVDIK 3000
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10215g058096
(183 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_808582 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.75
XP_001347297 PfEMP1 (Establishment) [Plasmodium falciparum] 23 6.4
XP_815749 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 8.4
>M.Javanica_Scaff10215g058096 on XP_808582 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 786
Score = 26.9 bits (58), Expect = 0.75, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 8/76 (10%)
Query: 3 WEQKNWREEWDEQMKTHPETLYPDYDILVNSKPYFLYNATQISQF-PKPFEEEQLFVWLD 61
+E ++ W E + T + V S+ +F Y + + F E ++ ++
Sbjct: 336 YESRDMGRSWTEAIGTLS-------GVWVKSRSFFWYLSLHVEAFITATIEGRKVMLYTQ 388
Query: 62 AGYGHGSQSAIPLGIW 77
GY G + A L +W
Sbjct: 389 RGYASGEKRATALYVW 404
>M.Javanica_Scaff10215g058096 on XP_001347297 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 144
Score = 23.5 bits (49), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 11/25 (44%)
Query: 64 YGHGSQSAIPLGIWKPTQINYEQIT 88
Y H IPL T I+Y IT
Sbjct: 55 YSHNDNDKIPLDNLGSTNISYNYIT 79
>M.Javanica_Scaff10215g058096 on XP_815749 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1053
Score = 23.9 bits (50), Expect = 8.4, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 108 YRKHRSVISGGFLAGGEKVIRRFW 131
Y H+S++ GG G K I R W
Sbjct: 325 YDVHKSILDGGNWNGHVKPITRVW 348
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10196g058035
(91 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_844699 VSG (Establishment) [Trypanosoma brucei] 22 5.3
XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum] 22 9.1
>M.Javanica_Scaff10196g058035 on XP_844699 VSG (Establishment) [Trypanosoma brucei]
Length = 341
Score = 22.3 bits (46), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 55 ADTSSSLKRPLEEQEVCSV 73
+D +++ KRP EEQ C++
Sbjct: 309 SDMTNNTKRPPEEQRSCTI 327
>M.Javanica_Scaff10196g058035 on XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1711
Score = 21.9 bits (45), Expect = 9.1, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 8/49 (16%)
Query: 40 TSSADI----CVE----IDDENNADTSSSLKRPLEEQEVCSVCNDVATG 80
TS DI C+E D NN + SLK P E E C D + G
Sbjct: 1159 TSGTDIAYCNCMEGTSTTDSSNNDNIPESLKYPPIEIEEGCTCKDPSPG 1207
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10231g058149
(57 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_816233 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.8
XP_829791 VSG (Establishment) [Trypanosoma brucei] 22 2.5
XP_001609450 variant erythrocyte surface antigen-1, alpha subun... 22 3.3
XP_001609565 variant erythrocyte surface antigen-1, alpha subun... 22 3.3
XP_816181 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 3.8
XP_818308 Trans-sialidase (Invasion) [Trypanosoma cruzi] 21 5.4
>M.Javanica_Scaff10231g058149 on XP_816233 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 851
Score = 22.7 bits (47), Expect = 1.8, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 10 FLIIFSSQFDRNNGNVTINLNEKRQVID 37
FL+ S++ + NNG I L EK++ ++
Sbjct: 438 FLLYKSAESNDNNGEKLIALYEKKKKVN 465
>M.Javanica_Scaff10231g058149 on XP_829791 VSG (Establishment) [Trypanosoma brucei]
Length = 506
Score = 22.3 bits (46), Expect = 2.5, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 13 IFSSQFDRNNGNVTINLNEKRQVIDGFGASTAWQGA 48
+ S F+ + N+T E R G GAS WQ +
Sbjct: 58 VASDAFEIDKLNMTAASAEWRTKFGGGGASHDWQAS 93
>M.Javanica_Scaff10231g058149 on XP_001609450 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1309
Score = 21.9 bits (45), Expect = 3.3, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 23 GNVTINLNEKRQVIDGFGAS 42
GNVT LNE ++ G G +
Sbjct: 83 GNVTERLNELFSLVQGLGGT 102
>M.Javanica_Scaff10231g058149 on XP_001609565 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1341
Score = 21.9 bits (45), Expect = 3.3, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 23 GNVTINLNEKRQVIDGFGAS 42
GNVT LNE ++ G G +
Sbjct: 83 GNVTNRLNELFSLVQGLGGT 102
>M.Javanica_Scaff10231g058149 on XP_816181 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 967
Score = 21.6 bits (44), Expect = 3.8, Method: Composition-based stats.
Identities = 10/42 (23%), Positives = 23/42 (54%)
Query: 12 IIFSSQFDRNNGNVTINLNEKRQVIDGFGASTAWQGAVSDQI 53
+++ S +NG I L EK++ +G + + W +++Q+
Sbjct: 436 LLYKSAESGDNGEKLIALYEKKRGDEGKPSHSLWSVLLTEQL 477
>M.Javanica_Scaff10231g058149 on XP_818308 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 925
Score = 21.2 bits (43), Expect = 5.4, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 36 IDGFGASTAWQGAVSDQIMNEL 57
I G G+ST QG VS + N L
Sbjct: 682 IGGDGSSTEGQGGVSVTVRNVL 703
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10233g058161
(191 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_626924 Hsp90 (Heat shock protein) [Cryptosporidium parvum] 25 2.3
>M.Javanica_Scaff10233g058161 on XP_626924 Hsp90 (Heat shock protein) [Cryptosporidium parvum]
Length = 255
Score = 25.4 bits (54), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 78 LINSKSFLLRPSSQQQLTSNENNKENNEFPTLIPPYKINKEFT--DPSI-ITKKEEFNNI 134
LI++ S L + LT E K N E I P K+N T D I +TK E NN+
Sbjct: 45 LISNASDALDKIRYESLTDPEQLKSNEEMHIRIIPDKVNNTLTIEDSGIGMTKNELINNL 104
Query: 135 ERQEISGGRS 144
SG ++
Sbjct: 105 GTIARSGTKA 114
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10204g058064
(143 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_820473 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.88
XP_820141 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.6
XP_804542 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.7
XP_820142 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.5
XP_827709 VSG (Establishment) [Trypanosoma brucei] 24 4.2
XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum] 24 4.2
XP_001608795 variant erythrocyte surface antigen-1, alpha subun... 24 4.4
XP_806541 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.5
XP_807772 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.5
XP_812613 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 6.2
XP_807842 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 6.9
XP_809739 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 6.9
XP_818091 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 8.5
>M.Javanica_Scaff10204g058064 on XP_820473 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 846
Score = 26.2 bits (56), Expect = 0.88, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 25/48 (52%)
Query: 64 DFVLEASEKAREGYFKMLAEREDKTKKAIKEAIVIWAEANDLKKIYEE 111
+ +L ++ EG + ++A R + K IKE + W E ++ K+ E
Sbjct: 427 ELILLYEKRNGEGPYSLVAMRLTEQLKRIKEVVKTWKELDNALKVPTE 474
>M.Javanica_Scaff10204g058064 on XP_820141 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 925
Score = 25.4 bits (54), Expect = 1.6, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 88 TKKAIKEAIVIWAEANDLKKIYEESTSEHYKKR 120
TKKA + + E+ D K+ EE SE KK+
Sbjct: 126 TKKAAETPEEVLKESKDWTKVLEEGASEGQKKK 158
>M.Javanica_Scaff10204g058064 on XP_804542 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 813
Score = 25.4 bits (54), Expect = 1.7, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 71 EKAREGY---FKMLAEREDKTKKAIKEAIVIWAEANDL-KKIYEESTSEHYKKRKTFHDV 126
EK +G+ M++ R + K +K+ + W E +DL K+ S +E + T
Sbjct: 463 EKKEDGFRQSLGMVSVRLTEQLKRVKDVLATWKEVDDLVSKLCTPSNTEKDRPNSTPCST 522
Query: 127 VVENLAG 133
V+ AG
Sbjct: 523 TVKITAG 529
>M.Javanica_Scaff10204g058064 on XP_820142 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 861
Score = 24.6 bits (52), Expect = 2.5, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 88 TKKAIKEAIVIWAEANDLKKIYEESTSEHYKKR 120
TKK K + + + D ++ EE TSE KK+
Sbjct: 126 TKKTAKTPVEVLEKPEDGTQVLEEGTSEGQKKK 158
>M.Javanica_Scaff10204g058064 on XP_827709 VSG (Establishment) [Trypanosoma brucei]
Length = 474
Score = 23.9 bits (50), Expect = 4.2, Method: Composition-based stats.
Identities = 10/39 (25%), Positives = 17/39 (43%)
Query: 99 WAEANDLKKIYEESTSEHYKKRKTFHDVVVENLAGKALE 137
W E+ L K E + H++ R + E + K +E
Sbjct: 104 WEESQRLLKEKHERSQAHHRGRNSLQYHTAEEIKSKVME 142
>M.Javanica_Scaff10204g058064 on XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3954
Score = 24.3 bits (51), Expect = 4.2, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Query: 99 WAEANDLKKIYEESTSE-HYKKRKTFHDV 126
+AEA LKK+Y++ S+ H + +F D+
Sbjct: 3181 FAEAKRLKKVYKDDNSKLHQAMKYSFSDI 3209
>M.Javanica_Scaff10204g058064 on XP_001608795 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1323
Score = 23.9 bits (50), Expect = 4.4, Method: Composition-based stats.
Identities = 11/47 (23%), Positives = 24/47 (51%)
Query: 71 EKAREGYFKMLAEREDKTKKAIKEAIVIWAEANDLKKIYEESTSEHY 117
++ R+G + E+E++ + E + E N+L+K ++ S Y
Sbjct: 769 DELRKGVEGLKQEKENEIMCGLSEVFGVPVEDNELEKALQQEVSHEY 815
>M.Javanica_Scaff10204g058064 on XP_806541 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 753
Score = 23.9 bits (50), Expect = 4.5, Method: Composition-based stats.
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 33 GKDDKVGGHHQPPSFYGGGK 52
GKD ++GG H P S G K
Sbjct: 136 GKDYRMGGLHHPTSITRGNK 155
>M.Javanica_Scaff10204g058064 on XP_807772 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 852
Score = 23.9 bits (50), Expect = 5.5, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Query: 79 KMLAEREDKTKKAIKEAIVIWAEANDLKKIYEESTSEHYKK 119
++L E E+K E + +AN ++ EE TS H KK
Sbjct: 123 QLLTETEEKKDNTPVEVL---NDANTKTQVLEEGTSPHSKK 160
>M.Javanica_Scaff10204g058064 on XP_812613 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1038
Score = 23.5 bits (49), Expect = 6.2, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Query: 71 EKAREGYFKMLAEREDKTKKAIKEAIVIWAEANDLKKIYEESTS 114
E ++G + ++A R + + IKE + W DL +E +S
Sbjct: 432 ENKKDGAYNLVAVRLTEKLERIKEVVKTW---KDLDSAFESCSS 472
>M.Javanica_Scaff10204g058064 on XP_807842 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1043
Score = 23.5 bits (49), Expect = 6.9, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Query: 71 EKAREGYFKMLAEREDKTKKAIKEAIVIWAEANDLKKIYEESTS 114
E ++G + ++A R + + IKE + W DL +E +S
Sbjct: 437 ENKKDGAYNLVAVRLTEKLERIKEVVKTW---KDLDSAFESCSS 477
>M.Javanica_Scaff10204g058064 on XP_809739 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1043
Score = 23.5 bits (49), Expect = 6.9, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Query: 71 EKAREGYFKMLAEREDKTKKAIKEAIVIWAEANDLKKIYEESTS 114
E ++G + ++A R + + IKE + W DL +E +S
Sbjct: 437 ENKKDGAYNLVAVRLTEKLERIKEVVKTW---KDLDSAFESCSS 477
>M.Javanica_Scaff10204g058064 on XP_818091 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 828
Score = 23.1 bits (48), Expect = 8.5, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 24/48 (50%)
Query: 64 DFVLEASEKAREGYFKMLAEREDKTKKAIKEAIVIWAEANDLKKIYEE 111
+ VL ++ + + ++A R + K IKE + W E ++ K+ E
Sbjct: 425 ELVLLYEKRNADRAYSLVAMRLTEQLKRIKEVVKTWKEMDNALKVPTE 472
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1018g012063
(88 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_821683 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.5
XP_001609167 variant erythrocyte surface antigen-1, alpha subun... 22 5.8
XP_001608665 variant erythrocyte surface antigen-1, alpha subun... 22 5.8
XP_001611365 variant erythrocyte surface antigen-1, alpha subun... 22 5.8
XP_001609041 variant erythrocyte surface antigen-1, alpha subun... 22 6.3
>M.Javanica_Scaff1018g012063 on XP_821683 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 879
Score = 23.5 bits (49), Expect = 2.5, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 54 IVLPNRTKKELNEEEADKKGFSCIV 78
+V P K+ NEE+ D K S I+
Sbjct: 254 LVFPVEATKKKNEEDKDVKAVSLII 278
>M.Javanica_Scaff1018g012063 on XP_001609167 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1317
Score = 22.3 bits (46), Expect = 5.8, Method: Composition-based stats.
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 21 LDCRLCIGNYIPNK 34
++CR C GN PNK
Sbjct: 1127 IECRGCKGNCDPNK 1140
>M.Javanica_Scaff1018g012063 on XP_001608665 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1326
Score = 22.3 bits (46), Expect = 5.8, Method: Composition-based stats.
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 21 LDCRLCIGNYIPNK 34
++CR C GN PNK
Sbjct: 1161 IECRGCKGNCDPNK 1174
>M.Javanica_Scaff1018g012063 on XP_001611365 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1335
Score = 22.3 bits (46), Expect = 5.8, Method: Composition-based stats.
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 21 LDCRLCIGNYIPNK 34
++CR C GN PNK
Sbjct: 1144 IECRGCKGNCDPNK 1157
>M.Javanica_Scaff1018g012063 on XP_001609041 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1318
Score = 22.3 bits (46), Expect = 6.3, Method: Composition-based stats.
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 21 LDCRLCIGNYIPNK 34
++CR C GN PNK
Sbjct: 1127 IECRGCKGNCDPNK 1140
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10225g058129
(113 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001608670 variant erythrocyte surface antigen-1, alpha subun... 26 0.53
XP_001350595 PfEMP1 (Establishment) [Plasmodium falciparum] 24 2.7
XP_804548 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.0
XP_806454 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.6
CAC20154 Eimepsin (Protease) [Eimeria tenella] 22 10.0
>M.Javanica_Scaff10225g058129 on XP_001608670 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1320
Score = 26.2 bits (56), Expect = 0.53, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
Query: 40 GFNQPSFTHQIQPPNFGTFNSQHLPLHHFPQGFGHISASYPTQSQIATDQSSSSSL 95
G N P F H I +F T + FP G G + S T TDQ+ + ++
Sbjct: 388 GMNYPGFIHTIHRDSFNTDQAT-----VFPNGNGSGTTSGTTNRISDTDQNKNGAI 438
>M.Javanica_Scaff10225g058129 on XP_001350595 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2256
Score = 24.3 bits (51), Expect = 2.7, Method: Composition-based stats.
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 29 NLPEYHNSNHPGFNQPSFTHQIQPPNF 55
N+P+ N P N P+ + ++ P F
Sbjct: 1239 NIPDTSGDNTPTLNTPTLKNFVEIPTF 1265
>M.Javanica_Scaff10225g058129 on XP_804548 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 691
Score = 23.1 bits (48), Expect = 5.0, Method: Composition-based stats.
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 86 ATDQSSSSSLGSGPSFPT 103
A +SSS G GP FPT
Sbjct: 420 ADPAASSSKRGCGPPFPT 437
>M.Javanica_Scaff10225g058129 on XP_806454 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 694
Score = 23.1 bits (48), Expect = 5.6, Method: Composition-based stats.
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 86 ATDQSSSSSLGSGPSFPT 103
A +SSS G GP FPT
Sbjct: 420 ADPAASSSKRGCGPPFPT 437
>M.Javanica_Scaff10225g058129 on CAC20154 Eimepsin (Protease) [Eimeria tenella]
Length = 255
Score = 22.3 bits (46), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 56 GTFNSQHLPLHHFPQGFGHISASYPTQSQIATDQSSSSSL 95
GT Q L +H Q FG I P + + + SS+L
Sbjct: 87 GTMARQKLLNYHNSQYFGEIKIGTPGRRFVVVFDTGSSNL 126
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1021g012082
(474 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_807799 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.4
XP_821669 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.5
XP_820017 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 3.0
XP_815166 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 4.1
XP_821991 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 7.2
XP_821425 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 10.0
>M.Javanica_Scaff1021g012082 on XP_807799 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 345
Score = 26.9 bits (58), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 179 FARHNTFRNHSVYITGESYGGVYLPTLGARIVDGQGEFPINL 220
FA HN +V I GE G +P +GA + DG+ + L
Sbjct: 140 FANHNFTLVATVSIHGEPEGDTPIPLMGATMNDGKNTVLLGL 181
>M.Javanica_Scaff1021g012082 on XP_821669 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 879
Score = 27.3 bits (59), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 179 FARHNTFRNHSVYITGESYGGVYLPTLGARIVDGQ 213
FA +N +V I GE G +P +GA++ DG+
Sbjct: 554 FANYNFTLVATVSIHGEPEGATPIPLMGAKMDDGK 588
>M.Javanica_Scaff1021g012082 on XP_820017 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 779
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 179 FARHNTFRNHSVYITGESYGGVYLPTLGARIVDGQGEFPINL 220
FA HN +V I GE G +P +GA + DG+ + L
Sbjct: 574 FANHNFTLVATVSIHGEPEGDTPIPLMGATMNDGKNTVLLGL 615
>M.Javanica_Scaff1021g012082 on XP_815166 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 894
Score = 26.6 bits (57), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 179 FARHNTFRNHSVYITGESYGGVYLPTLGARIVD 211
FA +N +V I G GG ++P +GA+I D
Sbjct: 590 FANYNFTLVATVSIDGVPKGGSHIPLMGAKIRD 622
>M.Javanica_Scaff1021g012082 on XP_821991 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 882
Score = 25.8 bits (55), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 179 FARHNTFRNHSVYITGESYGGVYLPTLGARIVDG 212
FA +N +V I GE G +P +GA+I DG
Sbjct: 565 FANYNFTLVATVSIHGEPKGDNPIPLMGAKINDG 598
>M.Javanica_Scaff1021g012082 on XP_821425 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 787
Score = 25.0 bits (53), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 179 FARHNTFRNHSVYITGESYGGVYLPTLGARIVDGQ 213
FA HN +V I GE G +P +G R+ G+
Sbjct: 569 FANHNFTLVATVSIHGEPKGDTPIPLMGVRLDGGK 603
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10308g058385
(254 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_819344 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.45
XP_812950 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.50
XP_816764 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.69
XP_803061 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.85
XP_806431 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.1
XP_817310 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.1
AAG32024 MIC10 (Others) [Toxoplasma gondii] 26 1.8
XP_804320 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.3
XP_806729 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.8
XP_804821 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 3.4
XP_808800 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.5
XP_806731 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.6
XP_806966 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 7.4
XP_811304 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 7.8
XP_804421 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 8.2
XP_001351439 PfEMP1 (Establishment) [Plasmodium falciparum] 24 8.8
XP_815514 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 8.9
XP_821677 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 9.1
XP_001351515 PfEMP1 (Establishment) [Plasmodium falciparum] 24 9.3
XP_819907 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 10.0
>M.Javanica_Scaff10308g058385 on XP_819344 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 861
Score = 28.5 bits (62), Expect = 0.45, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 183 QTINKGKLPIVCQEEGNLFNQGEVECNKGEN 213
+T+N + P++ + GNLF E +CN+ ++
Sbjct: 91 ETMNSLRAPVLVEVNGNLFAVAEAQCNEAQD 121
>M.Javanica_Scaff10308g058385 on XP_812950 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 815
Score = 28.1 bits (61), Expect = 0.50, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 162 YRQEKKNVQSDNNEGTSFVNPQTINKGKLPIVCQEEGNLFNQGEVECNKGENEQNQIEVE 221
+ +K V D N G +T++ ++P++ + +G++F E + +GE+ I E
Sbjct: 73 FSPDKSFVWRDKNGG------ETVSSLRVPVLVEMDGDVFAVAEAQLKEGESNFTGIASE 126
Query: 222 EPNKILEEDTIDLN-KKIHSFDLNEMPEDEE 251
EE +L+ K+ + L E P D++
Sbjct: 127 LLEWTDEESKGELDATKLKTQVLEECPSDKK 157
>M.Javanica_Scaff10308g058385 on XP_816764 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 868
Score = 27.7 bits (60), Expect = 0.69, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 183 QTINKGKLPIVCQEEGNLFNQGEVECNKGEN 213
+T+N + P++ + GNLF E +CN+ ++
Sbjct: 91 ETMNSLRAPVLVEVNGNLFAVAEAQCNEAQD 121
>M.Javanica_Scaff10308g058385 on XP_803061 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 657
Score = 27.3 bits (59), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 13/52 (25%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 183 QTINKGKLPIVCQEEGNLFNQGEVECNKGENEQNQIEVE------EPNKILE 228
+T++ ++P + + +G++F E +C KG + I E E +K+L+
Sbjct: 89 KTVSSLRVPSLVELDGDVFAVAEAQCTKGGSGFTGIASELLELSDESSKLLD 140
>M.Javanica_Scaff10308g058385 on XP_806431 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 872
Score = 27.3 bits (59), Expect = 1.1, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 162 YRQEKKNVQSDNNEGTSFVNPQTINKGKLPIVCQEEGNLFNQGEVECNKGENEQNQIEVE 221
+ +K V D N G +T++ ++P++ + +G++ E + +GE+ I E
Sbjct: 123 FSPDKSFVWRDKNGG------ETVSSLRVPVLVEMDGDVLAVAEAQLKEGESNFTGIASE 176
Query: 222 EPNKILEEDTIDLN-KKIHSFDLNEMPEDEE 251
EE +L+ K+ + L E P D++
Sbjct: 177 LLEWTYEESKGELDATKLKTQVLEECPSDKK 207
>M.Javanica_Scaff10308g058385 on XP_817310 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 904
Score = 26.9 bits (58), Expect = 1.1, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 189 KLPIVCQEEGNLFNQGEVECNKGENEQNQIE------VEEPNKILEEDTI 232
++P + + G++F E +C KGEN I +EP+K L++ +
Sbjct: 96 RVPSLVEVNGDVFAVAEAQCTKGENSFTGIASKFLTLTDEPSKELDKSNL 145
>M.Javanica_Scaff10308g058385 on AAG32024 MIC10 (Others) [Toxoplasma gondii]
Length = 198
Score = 26.2 bits (56), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 8/46 (17%)
Query: 73 GENKVFNRSEYDKEYYQKNKEKKLENCRKYRKQNKEKVKESKRNYY 118
GE+ FN + D+EY ++++E L+N Q+ E+V+E+KR Y+
Sbjct: 56 GEHDFFNDYDQDEEYRKRHEE--LQN------QSPEEVEEAKRKYH 93
>M.Javanica_Scaff10308g058385 on XP_804320 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 309
Score = 25.8 bits (55), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 8/31 (25%), Positives = 19/31 (61%)
Query: 183 QTINKGKLPIVCQEEGNLFNQGEVECNKGEN 213
+T+ ++P + + G++F E +C KG++
Sbjct: 89 ETVGSLRVPSLVEVNGDVFAVAEAQCTKGDS 119
>M.Javanica_Scaff10308g058385 on XP_806729 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 499
Score = 25.8 bits (55), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 7/31 (22%), Positives = 19/31 (61%)
Query: 183 QTINKGKLPIVCQEEGNLFNQGEVECNKGEN 213
+T++ ++P++ + G++F E +C + N
Sbjct: 93 KTVSSLRVPVLVEVNGDVFAVAEAQCTEASN 123
>M.Javanica_Scaff10308g058385 on XP_804821 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 731
Score = 25.8 bits (55), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 7/32 (21%), Positives = 19/32 (59%)
Query: 183 QTINKGKLPIVCQEEGNLFNQGEVECNKGENE 214
+T++ ++P++ + G++F E +C + N
Sbjct: 91 ETVSSLRVPVLVEMNGDVFAVAEAQCTEASNS 122
>M.Javanica_Scaff10308g058385 on XP_808800 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 776
Score = 25.4 bits (54), Expect = 3.5, Method: Composition-based stats.
Identities = 7/31 (22%), Positives = 20/31 (64%)
Query: 183 QTINKGKLPIVCQEEGNLFNQGEVECNKGEN 213
+T++ ++P++ + +G++F E +C + N
Sbjct: 89 ETVSSLRVPVLVEMDGDVFAVAEAQCTEASN 119
>M.Javanica_Scaff10308g058385 on XP_806731 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 479
Score = 25.4 bits (54), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 7/31 (22%), Positives = 19/31 (61%)
Query: 183 QTINKGKLPIVCQEEGNLFNQGEVECNKGEN 213
+T++ ++P++ + G++F E +C + N
Sbjct: 55 KTVSSLRVPVLVEVNGDVFAVAEAQCTEASN 85
>M.Javanica_Scaff10308g058385 on XP_806966 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 777
Score = 24.6 bits (52), Expect = 7.4, Method: Composition-based stats.
Identities = 7/31 (22%), Positives = 19/31 (61%)
Query: 183 QTINKGKLPIVCQEEGNLFNQGEVECNKGEN 213
+T++ ++P++ + G++F E +C + N
Sbjct: 91 ETVSSLRVPVLVEMNGDVFAVAEAQCTEASN 121
>M.Javanica_Scaff10308g058385 on XP_811304 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 892
Score = 24.6 bits (52), Expect = 7.8, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 183 QTINKGKLPIVCQEEGNLFNQGEVECNKGE 212
+T++ P + + GNLF E +C K E
Sbjct: 185 ETVSSLYAPSLVEVNGNLFAVAEAQCKKNE 214
>M.Javanica_Scaff10308g058385 on XP_804421 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 864
Score = 24.3 bits (51), Expect = 8.2, Method: Composition-based stats.
Identities = 8/29 (27%), Positives = 19/29 (65%)
Query: 183 QTINKGKLPIVCQEEGNLFNQGEVECNKG 211
+T++ ++P + + +G++F E +C KG
Sbjct: 147 KTVSSLRVPSLVELDGDVFAVAEAQCTKG 175
>M.Javanica_Scaff10308g058385 on XP_001351439 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2326
Score = 24.3 bits (51), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Query: 32 EKGYTAEDLTEKLNIGAGSSVNPQIQKNKETLTKKDKDRNNGENKVFNRSEY-------- 83
E+G + + G G + P +KNKE + ++ K FN Y
Sbjct: 596 EEGVDDRNYDNDVRTGGGLCILPNQKKNKEEGANTSEKDHDEIQKTFNPFFYYWVAHMLK 655
Query: 84 DKEYYQKNKEKKLENCRKYRKQNKEKV 110
D +++K EK L+N K R +N EK
Sbjct: 656 DSIHWKKKLEKCLQNGTKTRCRNNEKC 682
>M.Javanica_Scaff10308g058385 on XP_815514 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 811
Score = 24.3 bits (51), Expect = 8.9, Method: Composition-based stats.
Identities = 8/29 (27%), Positives = 19/29 (65%)
Query: 183 QTINKGKLPIVCQEEGNLFNQGEVECNKG 211
+T++ ++P + + +G++F E +C KG
Sbjct: 90 KTVSSLRVPSLVELDGDVFAVAEAQCTKG 118
>M.Javanica_Scaff10308g058385 on XP_821677 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 861
Score = 24.3 bits (51), Expect = 9.1, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 35/76 (46%), Gaps = 18/76 (23%)
Query: 181 NPQTINKGKLPIVCQEEGNLFNQGEVEC----------------NKGENEQNQI--EVEE 222
+ +T++ ++P++ + G +F E +C N +N+ ++ + +E
Sbjct: 87 DEETVSSLRVPVLVEVNGGVFAVAEAQCTKDGVSFTGIASQLLTNTADNKPKEVLEDAKE 146
Query: 223 PNKILEEDTIDLNKKI 238
++LEED KK+
Sbjct: 147 KPQVLEEDISTEKKKV 162
>M.Javanica_Scaff10308g058385 on XP_001351515 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2181
Score = 24.3 bits (51), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 69 DRNNGENKVFNRSEYDKEYYQKNKEKKLENCRKYRKQNKEKVKESKR----NYYKRNRSE 124
D NN +NK F+ SEY +E EKK + +++N + K KR N+ K N
Sbjct: 454 DFNNTDNKTFSHSEYCEECPDCGVEKKDNGEFQKKEKNNGECKGGKRYEIPNHAKFNEIN 513
Query: 125 RIQYQKSYNQKNRETLLKK 143
+ + ++RET LKK
Sbjct: 514 VLSFGDK--GEDRETKLKK 530
>M.Javanica_Scaff10308g058385 on XP_819907 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 943
Score = 24.3 bits (51), Expect = 10.0, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 19/33 (57%)
Query: 181 NPQTINKGKLPIVCQEEGNLFNQGEVECNKGEN 213
+ +T++ + P + + G +F E +C KGE+
Sbjct: 88 DEETVSSLRAPSLVEMNGKVFAVAEAQCKKGED 120
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10196g058036
(65 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10301g058365
(368 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609166 variant erythrocyte surface antigen-1, beta subuni... 29 0.37
>M.Javanica_Scaff10301g058365 on XP_001609166 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1161
Score = 29.3 bits (64), Expect = 0.37, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 30/74 (40%), Gaps = 11/74 (14%)
Query: 181 GDKCVTND----GEACTRIVCPSGNSCFNGLCIPSSGTNCANSGECPDLHLCRDGRC-VS 235
GD C G+ C CPSG +G C SSGT C +C +C +S
Sbjct: 145 GDDCCLKGTDGIGKKCD---CPSGVGA-SGCCSTSSGTPCHQCSQCGTSE--AGNKCYLS 198
Query: 236 DVCAANGRVKCPPE 249
C NG PPE
Sbjct: 199 AYCKKNGVALSPPE 212
Score = 26.2 bits (56), Expect = 3.7, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 8/42 (19%)
Query: 293 DECYRKACQIGERCD-------SGICLRIEGTPCRDAAKECG 327
D C + IG++CD SG C GTPC + +CG
Sbjct: 147 DCCLKGTDGIGKKCDCPSGVGASGCCSTSSGTPCHQCS-QCG 187
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10308g058386
(117 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350415 PfEMP1 (Establishment) [Plasmodium falciparum] 23 5.1
>M.Javanica_Scaff10308g058386 on XP_001350415 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3056
Score = 23.5 bits (49), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 20 AFLFGGLGGGGGGGGTTCCCCGGGGSGGGGGGCGG 54
+++ + G G TTCC G G G G C
Sbjct: 715 KYIWLAMKHGAGMNSTTCC--GDGSVTGSGSSCDD 747
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10251g058216
(91 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351079 PfEMP1 (Establishment) [Plasmodium falciparum] 23 2.6
XP_001349438 PfEMP1 (Establishment) [Plasmodium falciparum] 23 3.4
>M.Javanica_Scaff10251g058216 on XP_001351079 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2203
Score = 23.5 bits (49), Expect = 2.6, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 6/34 (17%)
Query: 41 CG-RKRSGKSLVLDQIIKRLPNNLRIVNADGEKC 73
CG RKR +LD+II N ++ + DGE C
Sbjct: 1234 CGTRKR-----MLDKIIFECRGNGKVCSGDGEDC 1262
>M.Javanica_Scaff10251g058216 on XP_001349438 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2265
Score = 23.1 bits (48), Expect = 3.4, Method: Composition-based stats.
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 37 SCLICGRKRSGKSLVLDQIIKRLP 60
+C +CG KR+G+ +++K P
Sbjct: 504 ACPLCGVKRNGRKWERKEVMKDCP 527
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10231g058152
(142 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_819733 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.36
XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum] 27 0.43
XP_810072 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.81
XP_820382 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.8
XP_814818 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.8
XP_808495 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.9
XP_803376 VSG (Establishment) [Trypanosoma brucei] 25 2.5
XP_812044 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.8
XP_803124 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 6.3
>M.Javanica_Scaff10231g058152 on XP_819733 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 799
Score = 27.3 bits (59), Expect = 0.36, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 20/48 (41%), Gaps = 10/48 (20%)
Query: 61 YKGCGGNNNRFNSEKLCLQAVLRNFKFARTRTRTSYHL------FFWP 102
+ NN +N E LCL A +RN T+ + + L WP
Sbjct: 516 FSNASANNGTWNDEYLCLNATVRN----ATKVKDGFQLTEPDSGVMWP 559
>M.Javanica_Scaff10231g058152 on XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2178
Score = 26.9 bits (58), Expect = 0.43, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 9/46 (19%)
Query: 56 CKSFQYKGCGGNNNRFNSEKLCLQAVLRNFKFARTRTRTSYHLFFW 101
C + K G N+N C++ +NFK + + TSY+ FFW
Sbjct: 564 CHYDESKKSGQNDN-------CVEGTWQNFK--KDQKVTSYNAFFW 600
>M.Javanica_Scaff10231g058152 on XP_810072 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 731
Score = 26.2 bits (56), Expect = 0.81, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 66 GNNNRFNSEKLCLQAVLRN 84
NN +N E LCL A +RN
Sbjct: 503 ANNGTWNDEYLCLNATVRN 521
>M.Javanica_Scaff10231g058152 on XP_820382 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 729
Score = 25.0 bits (53), Expect = 1.8, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 65 GGNNNRFNSEKLCLQAVLRNFK 86
NN+ +N E LCL A + N K
Sbjct: 501 AANNDTWNDEYLCLNATVTNAK 522
>M.Javanica_Scaff10231g058152 on XP_814818 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 836
Score = 25.0 bits (53), Expect = 1.8, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 61 YKGCGGNNNRFNSEKLCLQAVLRNFK 86
+ NN +N E LCL A + N K
Sbjct: 518 FSNASANNETWNDEYLCLNATVTNAK 543
>M.Javanica_Scaff10231g058152 on XP_808495 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 753
Score = 25.0 bits (53), Expect = 1.9, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 65 GGNNNRFNSEKLCLQAVLRN 84
++ R+N E LCL A +RN
Sbjct: 502 AASDGRWNDEYLCLNATVRN 521
>M.Javanica_Scaff10231g058152 on XP_803376 VSG (Establishment) [Trypanosoma brucei]
Length = 503
Score = 24.6 bits (52), Expect = 2.5, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 52 KEKVCKSFQYKGCGGNNNRFNSEK 75
K++VCK+ K C N +N EK
Sbjct: 422 KDEVCKATDEKDCDKNKCEWNKEK 445
>M.Javanica_Scaff10231g058152 on XP_812044 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 855
Score = 23.9 bits (50), Expect = 4.8, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 11/53 (20%)
Query: 66 GNNNRFNSEKLCLQAVLRNFKFARTRTRTSYHL------FFWP-RTRTRTSYH 111
NN +N E LCL A + N T+ + + L WP TR H
Sbjct: 520 ANNETWNDEYLCLNATVTN----ATKVKDGFQLTEPDSGVMWPVNTRDDNVRH 568
>M.Javanica_Scaff10231g058152 on XP_803124 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 620
Score = 23.5 bits (49), Expect = 6.3, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 68 NNRFNSEKLCLQAVLRNFKFAR 89
+ R+N E LCL A + N K R
Sbjct: 329 DGRWNDEYLCLNATVTNAKKVR 350
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff101g001937
(152 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_802557 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.7
XP_805733 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.0
>M.Javanica_Scaff101g001937 on XP_802557 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 608
Score = 24.6 bits (52), Expect = 2.7, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 55 PCETKRPRLLL--VFNNYQLFSIFGRAHTETHLWHFFLAAHSESYASNFCPHTAQAIL 110
P E+ P L+ N+ Q +FG ++T W F L + N+ P+T ++
Sbjct: 423 PKESSSPIPLMGVRMNDAQGTVLFGLSYTHDKKWRFTLPNGAYEGGYNWQPNTTHQVM 480
>M.Javanica_Scaff101g001937 on XP_805733 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 823
Score = 24.3 bits (51), Expect = 4.0, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 24/49 (48%)
Query: 42 YILSASADTTLLPPCETKRPRLLLVFNNYQLFSIFGRAHTETHLWHFFL 90
+ L A+ +P + P + ++ N+ + ++FG ++T W F L
Sbjct: 517 FTLVATMSIHEVPQAGSPIPLMGVIMNDTKSTALFGLSYTHDKKWRFTL 565
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10248g058210
(560 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_804722 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 5.2
XP_820141 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 7.1
>M.Javanica_Scaff10248g058210 on XP_804722 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 151
Score = 25.8 bits (55), Expect = 5.2, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 23/57 (40%)
Query: 64 NGNPLNAAKFTGASSGCIDIDGVNHPEGAEYERQNKHFKYRCVNGQEEVSACIGSDR 120
+G + FTG +S +D+ GV P +K Y G E VS G R
Sbjct: 85 DGGDCSNVSFTGVASWYLDLSGVAGPTEISTAGASKFGAYPLKEGSEGVSTTNGITR 141
>M.Javanica_Scaff10248g058210 on XP_820141 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 925
Score = 25.8 bits (55), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 230 PSTSTPILPQSS-QSTSRQRSTPNNRT-STGSYSPFSPNISVGSRSNNSSGIGSS 282
P+ STP + S Q + +S+ RT GS+S P + G RS G GSS
Sbjct: 769 PTVSTPSAGKDSLQQVASGKSSDGTRTVDGGSFSDGEPTVETGDRS-TVQGDGSS 822
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10198g058042
(77 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_822017 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 7.0
XP_811897 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 8.5
>M.Javanica_Scaff10198g058042 on XP_822017 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 990
Score = 21.9 bits (45), Expect = 7.0, Method: Composition-based stats.
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 50 DDVAQDPLFKFKGKSKERET 69
+D DP F++KG + ++ET
Sbjct: 177 EDQLSDPNFEWKGITNDKET 196
>M.Javanica_Scaff10198g058042 on XP_811897 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 879
Score = 21.6 bits (44), Expect = 8.5, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 20 EETNVESPSAVQRKKQRKGNPS 41
E TN E A+ KK+++G PS
Sbjct: 431 ENTNDEKLIALYEKKKKEGKPS 452
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10168g057939
(581 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_820303 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 3.9
XP_805613 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 5.0
>M.Javanica_Scaff10168g057939 on XP_820303 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 873
Score = 26.9 bits (58), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 95 TQKSPKKNYNSTNDKSKFLQTDGLAD---IQFPRIKTSLQGYDDELL 138
T +P + N DK++FL+ +G AD + R T ++G D +L
Sbjct: 133 TANTPVEVLNGAEDKTQFLEEEGSADPKKVDVSRPTTVVEGNDIYML 179
>M.Javanica_Scaff10168g057939 on XP_805613 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 874
Score = 26.6 bits (57), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 95 TQKSPKKNYNSTNDKSKFLQTDGLAD---IQFPRIKTSLQGYDDELL 138
T +P + N DK++FL+ +G AD + R T ++G D +L
Sbjct: 134 TANTPVEVLNGAEDKTQFLEEEGSADPKKVDVSRPTTVVKGNDIYML 180
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10190g058013
(109 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351435 PfEMP1 (Establishment) [Plasmodium falciparum] 26 0.52
AAW71461 Plasmepsin IV (Proteases) [Plasmodium falciparum] 24 2.3
AAW71462 Plasmepsin IV (Proteases) [Plasmodium falciparum] 24 2.3
AAW71459 Plasmepsin IV (Proteases) [Plasmodium falciparum] 24 2.3
AAW71460 Plasmepsin IV (Proteases) [Plasmodium falciparum] 24 2.3
AAW71463 Plasmepsin IV (Proteases) [Plasmodium falciparum] 24 2.3
>M.Javanica_Scaff10190g058013 on XP_001351435 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2209
Score = 26.2 bits (56), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 17 FNSKKEVQFWLIYLEIKGDLNVYIHGNGYIPTYRRNI----TSFRDIE 60
F +++ + I E +GD N+ +G+GY + N+ ++F+D+E
Sbjct: 1224 FCKERKKRLKDIKYECRGDENITRYGSGYGEDCKNNLPENPSTFKDLE 1271
>M.Javanica_Scaff10190g058013 on AAW71461 Plasmepsin IV (Proteases) [Plasmodium falciparum]
Length = 448
Score = 24.3 bits (51), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 12/45 (26%), Positives = 20/45 (44%)
Query: 30 LEIKGDLNVYIHGNGYIPTYRRNITSFRDIESGNYWYGSMRLDEL 74
+E+ N+ +G G I T ++ D S N W S+ D +
Sbjct: 127 IELDDVANLMFYGEGQIGTNKQPFMFIFDTGSANLWVPSVNCDSI 171
>M.Javanica_Scaff10190g058013 on AAW71462 Plasmepsin IV (Proteases) [Plasmodium falciparum]
Length = 448
Score = 24.3 bits (51), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 12/45 (26%), Positives = 20/45 (44%)
Query: 30 LEIKGDLNVYIHGNGYIPTYRRNITSFRDIESGNYWYGSMRLDEL 74
+E+ N+ +G G I T ++ D S N W S+ D +
Sbjct: 127 IELDDVANLMFYGEGQIGTNKQPFMFIFDTGSANLWVPSVNCDSI 171
>M.Javanica_Scaff10190g058013 on AAW71459 Plasmepsin IV (Proteases) [Plasmodium falciparum]
Length = 448
Score = 23.9 bits (50), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 12/45 (26%), Positives = 20/45 (44%)
Query: 30 LEIKGDLNVYIHGNGYIPTYRRNITSFRDIESGNYWYGSMRLDEL 74
+E+ N+ +G G I T ++ D S N W S+ D +
Sbjct: 127 IELDDVANLMFYGEGQIGTNKQPFMFIFDTGSANLWVPSVNCDSI 171
>M.Javanica_Scaff10190g058013 on AAW71460 Plasmepsin IV (Proteases) [Plasmodium falciparum]
Length = 448
Score = 23.9 bits (50), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 12/45 (26%), Positives = 20/45 (44%)
Query: 30 LEIKGDLNVYIHGNGYIPTYRRNITSFRDIESGNYWYGSMRLDEL 74
+E+ N+ +G G I T ++ D S N W S+ D +
Sbjct: 127 IELDDVANLMFYGEGQIGTNKQPFMFIFDTGSANLWVPSVNCDSI 171
>M.Javanica_Scaff10190g058013 on AAW71463 Plasmepsin IV (Proteases) [Plasmodium falciparum]
Length = 448
Score = 23.9 bits (50), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 12/45 (26%), Positives = 20/45 (44%)
Query: 30 LEIKGDLNVYIHGNGYIPTYRRNITSFRDIESGNYWYGSMRLDEL 74
+E+ N+ +G G I T ++ D S N W S+ D +
Sbjct: 127 IELDDVANLMFYGEGQIGTNKQPFMFIFDTGSANLWVPSVNCDSI 171
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10176g057967
(50 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001608668 variant erythrocyte surface antigen-1, alpha subun... 26 0.076
XP_001349031 PfEMP1 (Establishment) [Plasmodium falciparum] 21 5.3
>M.Javanica_Scaff10176g057967 on XP_001608668 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1337
Score = 26.2 bits (56), Expect = 0.076, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 6 KGKMPFSINHISGPDKDISKRFCG 29
KG++ + +H P KD K FCG
Sbjct: 1040 KGELETNCDHTGEPSKDDKKYFCG 1063
>M.Javanica_Scaff10176g057967 on XP_001349031 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2275
Score = 20.8 bits (42), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 1 KNSIFKGKMPFSINHISGPDKD 22
+N+++ G P S NH S DK+
Sbjct: 2029 QNNVYSGIDPTSANHDSYSDKN 2050
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10231g058153
(77 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_811897 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.7
AAL38220 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 1.8
AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 1.8
AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 1.8
AAL38222 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 1.8
AAL38218 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 1.8
>M.Javanica_Scaff10231g058153 on XP_811897 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 879
Score = 23.5 bits (49), Expect = 1.7, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 5/52 (9%)
Query: 23 APKNPPKNDRCLEPKEVGIFCGFAGGPRWWYVAKEKVCKEVKLYIIKTVKNK 74
A K+PP D C K GF G E V ++ L + TV NK
Sbjct: 490 AEKDPPTGDVCGADKITAGLVGFLSGN-----FSENVWRDEYLGVNATVNNK 536
>M.Javanica_Scaff10231g058153 on AAL38220 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2957
Score = 23.5 bits (49), Expect = 1.8, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 1 MSKFIILLIVLTTLIHLSEFKKAPKNPPKNDR 32
M ++I IVL LI+L+EF ++ N++
Sbjct: 1 MQRWIFCNIVLHILIYLAEFSHEQESYSSNEK 32
>M.Javanica_Scaff10231g058153 on AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2965
Score = 23.5 bits (49), Expect = 1.8, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 1 MSKFIILLIVLTTLIHLSEFKKAPKNPPKNDR 32
M ++I IVL LI+L+EF ++ N++
Sbjct: 1 MQRWIFCNIVLHILIYLAEFSHEQESYSSNEK 32
>M.Javanica_Scaff10231g058153 on AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2969
Score = 23.5 bits (49), Expect = 1.8, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 1 MSKFIILLIVLTTLIHLSEFKKAPKNPPKNDR 32
M ++I IVL LI+L+EF ++ N++
Sbjct: 1 MQRWIFCNIVLHILIYLAEFSHEQESYSSNEK 32
>M.Javanica_Scaff10231g058153 on AAL38222 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2976
Score = 23.5 bits (49), Expect = 1.8, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 1 MSKFIILLIVLTTLIHLSEFKKAPKNPPKNDR 32
M ++I IVL LI+L+EF ++ N++
Sbjct: 1 MQRWIFCNIVLHILIYLAEFSHEQESYSSNEK 32
>M.Javanica_Scaff10231g058153 on AAL38218 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2977
Score = 23.5 bits (49), Expect = 1.8, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 1 MSKFIILLIVLTTLIHLSEFKKAPKNPPKNDR 32
M ++I IVL LI+L+EF ++ N++
Sbjct: 1 MQRWIFCNIVLHILIYLAEFSHEQESYSSNEK 32
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1023g012113
(88 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10275g058282
(406 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10204g058063
(103 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_805175 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.4
XP_803420 VSG (Establishment) [Trypanosoma brucei] 24 2.8
CAD21456 ESAG-7 (Establishment) [Trypanosoma brucei] 23 3.4
XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum] 23 5.5
>M.Javanica_Scaff10204g058063 on XP_805175 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 728
Score = 24.6 bits (52), Expect = 1.4, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 18 ISGKNLPGSKIKYCGERFELWI 39
+SGKN P S I Y ++ W+
Sbjct: 266 VSGKNYPFSMITYSTDKGNTWV 287
>M.Javanica_Scaff10204g058063 on XP_803420 VSG (Establishment) [Trypanosoma brucei]
Length = 526
Score = 23.9 bits (50), Expect = 2.8, Method: Composition-based stats.
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 36 ELWINKICKWPGEYDP 51
+L INK+CK+ E DP
Sbjct: 292 DLLINKLCKYIKEPDP 307
>M.Javanica_Scaff10204g058063 on CAD21456 ESAG-7 (Establishment) [Trypanosoma brucei]
Length = 338
Score = 23.5 bits (49), Expect = 3.4, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 61 DRIKNKCCNVGCNIEETKEACCFTQECLNRCY 92
+ I K N GCN+ T + CLNR +
Sbjct: 204 ESIVEKGENRGCNLMRTADGGLLKDVCLNRNF 235
>M.Javanica_Scaff10204g058063 on XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3119
Score = 23.1 bits (48), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 8/58 (13%)
Query: 19 SGKNLPGSKIKYCGERFELWINKIC----KWPGEYDPCLQLHLNTKDRIKNKCCNVGC 72
SG N+ KI E F +W+ K+ KW E + C+ NT NK CN C
Sbjct: 559 SGNNITEEKIISFDEFFYVWVRKLLIDSIKWENELNNCID---NTSTHC-NKECNKNC 612
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10277g058290
(613 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAE53332 SuAT1 (Establishment) [Theileria annulata] 27 2.6
XP_814219 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 9.0
>M.Javanica_Scaff10277g058290 on CAE53332 SuAT1 (Establishment) [Theileria annulata]
Length = 558
Score = 27.3 bits (59), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 13/102 (12%)
Query: 121 EAELS-VELLNLKSGESSNEFLLCKKLKHKKGKHPHHHHNHKGTKKPKKPKKTTTAKPRK 179
E+E+S +ELL S ESS + K K + + P T+K KPK+ +PRK
Sbjct: 369 ESEISDIELL-FSSDESSQQTEKIAKPKKPRIRRPRKQKPESETEKVGKPKR-KRGRPRK 426
Query: 180 ------NTSVTKKARPCRAILIFELIRIKILRLNIHQQLLFD 215
K+ARP + + + + +H+Q+ D
Sbjct: 427 LKPDEVEEPKRKRARPKK----HKADELDTDHIEVHKQVRID 464
>M.Javanica_Scaff10277g058290 on XP_814219 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 958
Score = 25.8 bits (55), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 60/166 (36%), Gaps = 37/166 (22%)
Query: 34 CNIE-IILECFPSLDVSADVDL--GIVD-ISAELGSKS--SELLSAEVNLDSLASVSVEA 87
C E + + P SAD+ + G+V +S K+ E L LD+ VE
Sbjct: 498 CTSESVGRDTLPGTACSADIKITDGLVGFLSGNFSDKTWRDEYLGVNATLDNEGVEQVET 557
Query: 88 GSKHNKKSNSSEHKSKKSSENEL-------------LSVEGKLKSS---------EAELS 125
G K +S +E K +N+L +S++G+ K + E
Sbjct: 558 GVKFKGRSAGAEWPVGKQGDNQLYHFANYNFTLVATVSIDGEPKEGNIPLLGVRLDGEGE 617
Query: 126 VELLNLKSGESSNEFLLCKKLKHKKGKHPHHHHNHKGTKKPKKPKK 171
+L+ L LLC HKK H T P+ KK
Sbjct: 618 KKLMELSYDREKKWILLCGGETHKK---------HSSTWDPETKKK 654
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10279g058294
(438 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_847559 VSG (Establishment) [Trypanosoma brucei] 26 3.6
XP_965999 PfEMP1 (Establishment) [Plasmodium falciparum] 26 4.8
AAK31228 variable surface protein 14b (Establishment) [Giardi... 25 6.5
AAK31223 variable surface protein 0a (Establishment) [Giardia... 25 7.0
AAK31233 variable surface protein 14g (Establishment) [Giardi... 25 7.0
>M.Javanica_Scaff10279g058294 on XP_847559 VSG (Establishment) [Trypanosoma brucei]
Length = 361
Score = 26.2 bits (56), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 36/97 (37%), Gaps = 18/97 (18%)
Query: 297 RYYYGI-------KEIYMVGKCICNGHSEHCE----PFDPARPNLWLCRCDHNTEGDN-- 343
R YGI +E K +C G E P +R L LC D +
Sbjct: 150 RALYGIPHQPKKMRERSATRKRVCEGDVSQPEVNQGPVSLSRDLLCLCATDRKSRRKTKL 209
Query: 344 -CQRCKPGFEQKRWRQSHDDDQ---FVCEPC-NCHGH 375
C+ C G ++ WR +D + F+ C N GH
Sbjct: 210 CCENCVSGENRRVWRPRNDAQKRWNFLVSQCSNVEGH 246
>M.Javanica_Scaff10279g058294 on XP_965999 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1325
Score = 26.2 bits (56), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 8/15 (53%), Positives = 14/15 (93%)
Query: 334 RCDHNTEGDNCQRCK 348
RC+++TEG+ C++CK
Sbjct: 342 RCNNDTEGEKCKKCK 356
>M.Javanica_Scaff10279g058294 on AAK31228 variable surface protein 14b (Establishment) [Giardia
duodenalis]
Length = 126
Score = 24.6 bits (52), Expect = 6.5, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Query: 404 CLNCQHNTKGINCNECVKGYFRPTGK 429
C CQ +T C EC+ GY+ + K
Sbjct: 27 CAKCQSSTS--TCTECLAGYYLSSSK 50
>M.Javanica_Scaff10279g058294 on AAK31223 variable surface protein 0a (Establishment) [Giardia
duodenalis]
Length = 126
Score = 24.6 bits (52), Expect = 7.0, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Query: 404 CLNCQHNTKGINCNECVKGYFRPTGK 429
C CQ +T C EC+ GY+ + K
Sbjct: 27 CAKCQSSTS--TCTECLAGYYLSSSK 50
>M.Javanica_Scaff10279g058294 on AAK31233 variable surface protein 14g (Establishment) [Giardia
duodenalis]
Length = 126
Score = 24.6 bits (52), Expect = 7.0, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Query: 404 CLNCQHNTKGINCNECVKGYFRPTGK 429
C CQ +T C EC+ GY+ + K
Sbjct: 27 CAKCQSSTS--TCTECLAGYYLSSSK 50
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10271g058274
(194 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_966160 PfEMP1 (Establishment) [Plasmodium falciparum] 29 0.16
XP_805038 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.63
XP_804332 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.7
XP_802392 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.8
XP_804011 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.1
XP_809961 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 6.7
XP_001608667 variant erythrocyte surface antigen-1, beta subuni... 24 6.9
AAL15422 MSA-2a2 (Invasion) [Babesia bovis] 23 8.9
>M.Javanica_Scaff10271g058274 on XP_966160 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2394
Score = 29.3 bits (64), Expect = 0.16, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Query: 33 KDNKKPPAKQPEKGGAGPESKSKEVGAKDAAGKDAAGKDGAAKDGGAKPPPAEQVQKKPE 92
KD K P KQ EKGG P S + ++ G + A G K PAE +
Sbjct: 1949 KDVIKAPPKQEEKGGCEPASPLEPEEVEEETASVPPGSEPEADKGPVK--PAELPKPPKR 2006
Query: 93 DKKKP 97
+K++P
Sbjct: 2007 NKRQP 2011
>M.Javanica_Scaff10271g058274 on XP_805038 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 927
Score = 27.3 bits (59), Expect = 0.63, Method: Composition-based stats.
Identities = 28/113 (24%), Positives = 44/113 (38%), Gaps = 18/113 (15%)
Query: 77 GGAKPPPAEQVQKKPEDKKKPAAGKGDAKNVKLPVTYHVVKGKPTSSELAKKTTATAQIA 136
GGA P PAE ++P KPA + + P + KP A +
Sbjct: 748 GGAPPTPAEPKSEEP----KPAESRPEEPK---PAESESEEPKPAEPNAATSSAREGTAD 800
Query: 137 MPPTTTLPVVGPGAASKDGKQSSGVATAQKASAAKSATGGSKATDVKSGTNDG 189
P + T S DG ++ V + +SAA + G S + D ++ +G
Sbjct: 801 QPASAT---------SSDGHEA--VTSVTSSSAAITDVGASSSDDAQTVGTEG 842
>M.Javanica_Scaff10271g058274 on XP_804332 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 613
Score = 25.8 bits (55), Expect = 1.7, Method: Composition-based stats.
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 159 SGVATAQKASAAKSATGGSKATDVKSG 185
SGV AQ S A ++T GS TD +G
Sbjct: 59 SGVTAAQVGSTADASTSGSALTDAIAG 85
>M.Javanica_Scaff10271g058274 on XP_802392 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 531
Score = 25.8 bits (55), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 125 LAKKTTATAQIAMPPTTTLPVVGPGAASK 153
L +T +T +IA+ T+ +P+ PG S+
Sbjct: 321 LYNRTISTDEIALLSTSKVPIPNPGEESR 349
>M.Javanica_Scaff10271g058274 on XP_804011 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 952
Score = 25.0 bits (53), Expect = 3.1, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 125 LAKKTTATAQIAMPPTTTLPVVGPGAASKDGKQSSGVATAQKASA-AKSAT 174
L +T +T +IA+ + +P+ PG S+ +++ + AQ S AK A+
Sbjct: 692 LYNRTISTDEIALLSASKVPIPSPGEESRSVPETTTNSAAQAPSPEAKKAS 742
>M.Javanica_Scaff10271g058274 on XP_809961 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 916
Score = 24.3 bits (51), Expect = 6.7, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 50/122 (40%), Gaps = 9/122 (7%)
Query: 73 AAKDGGAKPPPAEQVQKKPEDKKKPAAGKGDAKNVKLPVTYHVVKGKPTSSELAKKTTAT 132
+ + GGA P PAE + P KPA + + P + T+++ A T++
Sbjct: 743 SVRSGGAAPTPAESESEGP----KPAESESEGPKPAEPSAATSSAREGTANQPASATSSD 798
Query: 133 AQ--IAMPPTTTLPVVGPGAASKDGKQSSGV---ATAQKASAAKSATGGSKATDVKSGTN 187
+A +++ GA+S D Q++G A Q + + G A + +
Sbjct: 799 GHEAVASVTSSSAASTDVGASSSDDAQTAGTEGGAMMQADQPTQFSVGTPDAANAATHNA 858
Query: 188 DG 189
+G
Sbjct: 859 EG 860
>M.Javanica_Scaff10271g058274 on XP_001608667 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1139
Score = 24.3 bits (51), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 47 GAGPESKSKEVGAKDAAGKDAAG 69
GAG E+ +K+ G ++AAG AG
Sbjct: 651 GAGGETHTKKCGLQNAAGSSTAG 673
>M.Javanica_Scaff10271g058274 on AAL15422 MSA-2a2 (Invasion) [Babesia bovis]
Length = 292
Score = 23.5 bits (49), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 31/87 (35%), Gaps = 5/87 (5%)
Query: 17 LTTTPLIFQCCKKKGKKDNKKPPAKQPEKGGAGPESKSKEVGAKDAAGKDAAGKDGAAKD 76
L PLI + + N P +K G + K + AKDA KD D
Sbjct: 116 LLRVPLIKKMLSEFNAFLNDNPQRLLADKNGEVTKYYKKHISAKDANVKDYTFLVKFCND 175
Query: 77 GGAKPPPAEQVQKKPED-----KKKPA 98
P ++ K + KKKPA
Sbjct: 176 FLDSKSPFMRLYKHLNEYDELVKKKPA 202
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10179g057970
(174 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609100 variant erythrocyte surface antigen-1, beta subuni... 25 2.6
XP_001609162 variant erythrocyte surface antigen-1, beta subuni... 25 3.1
XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum] 25 3.8
XP_001349437 PfEMP1 (Establishment) [Plasmodium falciparum] 23 9.4
XP_001350413 PfEMP1 (Establishment) [Plasmodium falciparum] 23 9.8
>M.Javanica_Scaff10179g057970 on XP_001609100 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1093
Score = 25.0 bits (53), Expect = 2.6, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 128 NQGYNSFYQASSSSFNNIIEGTTNGNYEIM 157
N Y S Y S+ + NI+ GTT G Y ++
Sbjct: 183 NNCYKSAYNKDSALWTNIVNGTT-GKYPLV 211
>M.Javanica_Scaff10179g057970 on XP_001609162 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1166
Score = 25.0 bits (53), Expect = 3.1, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 128 NQGYNSFYQASSSSFNNIIEGTTNGNYEIM 157
N Y S Y S+ + NI+ GTT G Y ++
Sbjct: 183 NNCYKSAYNKDSALWTNIVNGTT-GKYPLV 211
>M.Javanica_Scaff10179g057970 on XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3954
Score = 24.6 bits (52), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 43 IQTNHSHPSLYNQNIQPPQFDPNFHHY 69
I N H S N I+P QF FH +
Sbjct: 626 ILKNEKHVSETNSQIEPDQFQKTFHDF 652
>M.Javanica_Scaff10179g057970 on XP_001349437 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2231
Score = 23.5 bits (49), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 29 IQNTPNAEINSTTPIQTNHSHPSLYNQNIQPPQFDPNFH 67
+QN PN E N N++HP++ N++ F + H
Sbjct: 1934 LQNEPNTEPNILHDNLDNNTHPTMSRDNMEEKPFITSIH 1972
>M.Javanica_Scaff10179g057970 on XP_001350413 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2860
Score = 23.5 bits (49), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Query: 120 NFQENFPLNQGYNSFYQASSSSFNNIIEGTTNGNYEIMKELCKYIHNIDVNRNY 173
N ++ P+N+ N + S ++I NG+Y+I EL K N +NY
Sbjct: 2653 NSMDDIPINRDNNVY------SGIDLINDALNGDYDIYDELLKRKENELFGKNY 2700
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10203g058061
(152 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_811703 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.9
XP_828095 VSG (Establishment) [Trypanosoma brucei] 24 5.0
AAS67870 Leucyl aminopeptidase (Others) [Trypanosoma brucei] 23 8.5
>M.Javanica_Scaff10203g058061 on XP_811703 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1043
Score = 25.4 bits (54), Expect = 1.9, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 70 IILAPSVDEFGGAISVSEISNFIDKGGN 97
++LAP + F G SVSE + + GN
Sbjct: 762 VVLAPLLSTFAGGSSVSEPATATEIAGN 789
>M.Javanica_Scaff10203g058061 on XP_828095 VSG (Establishment) [Trypanosoma brucei]
Length = 517
Score = 23.9 bits (50), Expect = 5.0, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 84 SVSEISNFIDKGGNVFFTGGYNMGDAIKDLAAEVGFEFDDDKTSVIDHF---SYDANLV 139
++S + FI + GG+N G ++A + ++D T+ + F +Y AN++
Sbjct: 293 ALSAVQAFIRMHSGTGYLGGFNSGSCNGNVANGICVKYDHKITAGANGFTELTYAANML 351
>M.Javanica_Scaff10203g058061 on AAS67870 Leucyl aminopeptidase (Others) [Trypanosoma brucei]
Length = 671
Score = 23.1 bits (48), Expect = 8.5, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 70 IILAPSVDEFGGAISVSEISNFIDK 94
++ PSV E G + + +SNF++K
Sbjct: 484 LVNVPSVREGGSCTAAAFLSNFVEK 508
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10225g058128
(377 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001610196 variant erythrocyte surface antigen-1, alpha subun... 26 3.8
XP_001349438 PfEMP1 (Establishment) [Plasmodium falciparum] 25 7.9
XP_822017 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 8.9
>M.Javanica_Scaff10225g058128 on XP_001610196 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1330
Score = 26.2 bits (56), Expect = 3.8, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 189 NIIAVANQTLNKVEGEGTSSDAQRKPLES 217
+ ++ NQ +NK E + TS D ++ PL +
Sbjct: 1222 DFLSSLNQVINKKEDQATSKDQEQHPLSN 1250
>M.Javanica_Scaff10225g058128 on XP_001349438 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2265
Score = 25.4 bits (54), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 14/71 (19%)
Query: 267 DLNKGKEIEKKDVVNISSGANISSKSEIPMDKIKQRFNSKSSTSESVENKEEDLEEDLSS 326
D +GK+IEK VN ++G D + Q+ K S ++V +E++ +S+
Sbjct: 1174 DGGEGKKIEK---VNDANG-----------DDLFQKLKDKYSDYKTVTLEEDNTSSAMST 1219
Query: 327 NSDTSETTSSS 337
+ TSETTS+S
Sbjct: 1220 SPRTSETTSAS 1230
>M.Javanica_Scaff10225g058128 on XP_822017 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 990
Score = 25.0 bits (53), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 82 KAPKIPVTGQSSNRIPPKIEQKASQNPPSTSSNPKGVH 119
K P P+T S++ + P A+ TSS P G H
Sbjct: 826 KVPTKPLTVSSASVVSPIPSVAATAQIAGTSSTPAGTH 863
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10296g058348
(176 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_650642 CP2 (Cysteine protease) [Entamoeba histolytica] 23 7.8
>M.Javanica_Scaff10296g058348 on XP_650642 CP2 (Cysteine protease) [Entamoeba histolytica]
Length = 315
Score = 23.5 bits (49), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 37 IFDSNVKEGVIKSPGHPVEGSDILDCKWNILPAENTFIYFEFERFN 82
++D ++ GV K +P GSD CK N+ Y + R N
Sbjct: 169 VYDYIIEHGVAKESDYPYTGSDST-CKTNVKSFAKITGYTKVPRNN 213
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1027g012138
(456 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_845135 VSG (Establishment) [Trypanosoma brucei] 26 4.0
>M.Javanica_Scaff1027g012138 on XP_845135 VSG (Establishment) [Trypanosoma brucei]
Length = 474
Score = 26.2 bits (56), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 298 LKDIAKKAGSLEAEIAKILEELKK---DKALNAKHEKIVFPNIISDKLNFLTQ 347
+ ++ AGS +AE+AK+++ L D +A + IS+ LN LTQ
Sbjct: 65 MSELQMAAGSTDAELAKLVQPLLAVAIDVQQDATTDLPTASKTISETLNALTQ 117
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10231g058155
(61 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_820663 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 2.7
XP_822014 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.3
XP_818312 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.6
XP_810496 Trans-sialidase (Invasion) [Trypanosoma cruzi] 21 6.7
XP_811004 Trans-sialidase (Invasion) [Trypanosoma cruzi] 21 7.1
XP_817003 Trans-sialidase (Invasion) [Trypanosoma cruzi] 21 7.5
XP_817716 Trans-sialidase (Invasion) [Trypanosoma cruzi] 21 8.0
XP_812514 Trans-sialidase (Invasion) [Trypanosoma cruzi] 21 8.8
>M.Javanica_Scaff10231g058155 on XP_820663 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 928
Score = 22.3 bits (46), Expect = 2.7, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 14 GGTLPSSFSSYITSQGKNFQQQNNIKVTVGGS 45
GG+ S S +T+ G+ +Q+ ++ + GGS
Sbjct: 766 GGSTSPSAPSTVTTSGEESVKQSALRASPGGS 797
>M.Javanica_Scaff10231g058155 on XP_822014 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 950
Score = 21.6 bits (44), Expect = 5.3, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 24 YITSQGKNFQQQNNIKVTVGGSFTYSFP 51
YI G N + Q + VTV Y+ P
Sbjct: 746 YIGGDGSNAEGQEGVSVTVTNVLLYNRP 773
>M.Javanica_Scaff10231g058155 on XP_818312 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 928
Score = 21.6 bits (44), Expect = 5.6, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 24 YITSQGKNFQQQNNIKVTVGGSFTYSFP 51
YI G N + Q + VTV Y+ P
Sbjct: 683 YIGGDGSNTEGQGGVSVTVRNVLLYNRP 710
>M.Javanica_Scaff10231g058155 on XP_810496 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 943
Score = 21.2 bits (43), Expect = 6.7, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 24 YITSQGKNFQQQNNIKVTVGGSFTYSFP 51
YI G N + Q + VTV Y+ P
Sbjct: 696 YIGGDGSNTEGQGGVSVTVRNVLLYNRP 723
>M.Javanica_Scaff10231g058155 on XP_811004 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 933
Score = 21.2 bits (43), Expect = 7.1, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 24 YITSQGKNFQQQNNIKVTVGGSFTYSFP 51
YI G N Q ++ VTV Y+ P
Sbjct: 688 YIGGDGSNSWSQEDVSVTVRNVLLYNRP 715
>M.Javanica_Scaff10231g058155 on XP_817003 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 931
Score = 21.2 bits (43), Expect = 7.5, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 24 YITSQGKNFQQQNNIKVTVGGSFTYSFP 51
YI G N + Q + VTV Y+ P
Sbjct: 687 YIGGDGSNTEGQGGVSVTVRNVLLYNRP 714
>M.Javanica_Scaff10231g058155 on XP_817716 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 948
Score = 20.8 bits (42), Expect = 8.0, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 24 YITSQGKNFQQQNNIKVTVGGSFTYSFP 51
YI G N + Q + VTV Y+ P
Sbjct: 701 YIGGDGSNTEGQGGVSVTVRNVLLYNRP 728
>M.Javanica_Scaff10231g058155 on XP_812514 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 925
Score = 20.8 bits (42), Expect = 8.8, Method: Composition-based stats.
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 24 YITSQGKNFQQQNNIKVTVGGSFTYSFP 51
YI G N + + ++ VTV Y+ P
Sbjct: 682 YIGGDGANAENKEDVSVTVTNVLLYNRP 709
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1023g012111
(65 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350082 Rh2b (Adhesin) [Plasmodium falciparum] 23 1.4
XP_001609033 variant erythrocyte surface antigen-1, alpha subun... 23 1.7
XP_001609041 variant erythrocyte surface antigen-1, alpha subun... 23 1.9
XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum] 23 2.2
ABA19447 HCNC (Others) [Giardia duodenalis] 22 5.2
XP_648254 SREHP (Adhesin) [Entamoeba histolytica] 22 5.7
XP_001609754 variant erythrocyte surface antigen-1, alpha subun... 22 5.9
ABC02174 Falstatin (Others) [Plasmodium falciparum] 21 7.9
XP_001347836 Falcipain 2 (Cysteine protease) [Plasmodium falc... 21 7.9
>M.Javanica_Scaff1023g012111 on XP_001350082 Rh2b (Adhesin) [Plasmodium falciparum]
Length = 1115
Score = 23.1 bits (48), Expect = 1.4, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 14 LTLVSEKTYGNLTAENCKNIKDPY 37
LTL S +T+ NL + NI+D Y
Sbjct: 240 LTLESIQTFNNLYGDLMSNIQDVY 263
>M.Javanica_Scaff1023g012111 on XP_001609033 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1270
Score = 23.1 bits (48), Expect = 1.7, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 6/48 (12%)
Query: 5 IFVFFLLAFLTLVSEKTYGNLTAENCKNIKDPYIVGACTKNGALDYDC 52
+F FF S KT T + C++ KDP + GA DY C
Sbjct: 938 VFGFFRGGIGEKESGKTKNGQTNKACEHTKDP------STKGADDYFC 979
>M.Javanica_Scaff1023g012111 on XP_001609041 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1318
Score = 22.7 bits (47), Expect = 1.9, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 6/48 (12%)
Query: 5 IFVFFLLAFLTLVSEKTYGNLTAENCKNIKDPYIVGACTKNGALDYDC 52
+F FF S KT T + C++ KDP + GA DY C
Sbjct: 975 VFGFFRGGIGEKESGKTKNGQTNKACEHTKDP------STKGADDYFC 1016
>M.Javanica_Scaff1023g012111 on XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum]
Length = 3130
Score = 22.7 bits (47), Expect = 2.2, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 14 LTLVSEKTYGNLTAENCKNIKDPY 37
LTL S +T+ NL + NI+D Y
Sbjct: 2379 LTLESIQTFNNLYGDLMSNIQDVY 2402
>M.Javanica_Scaff1023g012111 on ABA19447 HCNC (Others) [Giardia duodenalis]
Length = 255
Score = 21.6 bits (44), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 28 ENCKNIKDPYIVGAC 42
ENC + DPYI C
Sbjct: 55 ENCTSCTDPYICEVC 69
>M.Javanica_Scaff1023g012111 on XP_648254 SREHP (Adhesin) [Entamoeba histolytica]
Length = 233
Score = 21.6 bits (44), Expect = 5.7, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 10 LLAFLTLVSEKTYGNLTAENCKNIKDPYIVGACTKNGA 47
+ AFL ++ + N+ + + +KD I G KN A
Sbjct: 1 MFAFLLFIAFTSATNIILDLDQEVKDTNIYGVFLKNEA 38
>M.Javanica_Scaff1023g012111 on XP_001609754 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1295
Score = 21.6 bits (44), Expect = 5.9, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 22/53 (41%), Gaps = 9/53 (16%)
Query: 22 YGNLTAENCKNIKDPYIVGACTKNGALDYDC---------VYKKCHKCCKNHG 65
+G +ENC+ +KD C G + + + +KC +C + G
Sbjct: 136 HGKQGSENCEYLKDKTPENKCDSCGCMKWKVKDPNNEGTPLGRKCTRCSDSGG 188
>M.Javanica_Scaff1023g012111 on ABC02174 Falstatin (Others) [Plasmodium falciparum]
Length = 492
Score = 21.2 bits (43), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 6 FVFFLLAFLTLVSEKTYGNLTAENCKNIKDPYIVGACTKNGA 47
F+F L+ F +E T NI D YI+ + K+ +
Sbjct: 46 FMFALMLFYFTRNENNKTLFTNSLSNNINDDYIINSLLKSES 87
>M.Javanica_Scaff1023g012111 on XP_001347836 Falcipain 2 (Cysteine protease) [Plasmodium
falciparum]
Length = 492
Score = 21.2 bits (43), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 6 FVFFLLAFLTLVSEKTYGNLTAENCKNIKDPYIVGACTKNGA 47
F+F L+ F +E T NI D YI+ + K+ +
Sbjct: 46 FMFALMLFYFTRNENNKTLFTNSLSNNINDDYIINSLLKSES 87
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10214g058091
(50 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_650534 HgI (Adhesin) [Entamoeba histolytica] 24 0.42
XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum] 22 2.4
XP_821703 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 3.3
>M.Javanica_Scaff10214g058091 on XP_650534 HgI (Adhesin) [Entamoeba histolytica]
Length = 1207
Score = 23.9 bits (50), Expect = 0.42, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 11/22 (50%)
Query: 22 KNNNNNNIHPMPVLPPPNAQNV 43
KNNN H VLPP N V
Sbjct: 197 KNNNITKCHASTVLPPTNNMAV 218
>M.Javanica_Scaff10214g058091 on XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3954
Score = 21.9 bits (45), Expect = 2.4, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 4/32 (12%)
Query: 23 NNNNNNIHPMPVLPP----PNAQNVECGDDDN 50
NNN+ NI+P PP P+ + + D+N
Sbjct: 3801 NNNSGNINPSGNTPPTSDIPSGKLSDIPSDNN 3832
>M.Javanica_Scaff10214g058091 on XP_821703 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 912
Score = 21.6 bits (44), Expect = 3.3, Method: Composition-based stats.
Identities = 6/18 (33%), Positives = 14/18 (77%)
Query: 13 LLVIAGSLAKNNNNNNIH 30
+L++ G+++++ NN IH
Sbjct: 278 VLLVKGTISESGNNKKIH 295
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10172g057953
(120 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609033 variant erythrocyte surface antigen-1, alpha subun... 24 4.0
>M.Javanica_Scaff10172g057953 on XP_001609033 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1270
Score = 23.9 bits (50), Expect = 4.0, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 29 SVVDNTTPLQQVHKCGLLLNG 49
+ ++N TP Q+ H+C +L G
Sbjct: 229 TAINNDTPSQRRHQCAKILLG 249
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10277g058288
(137 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10197g058039
(163 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609033 variant erythrocyte surface antigen-1, alpha subun... 25 2.9
XP_001351513 PfEMP1 (Establishment) [Plasmodium falciparum] 24 6.2
>M.Javanica_Scaff10197g058039 on XP_001609033 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1270
Score = 25.0 bits (53), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 129 TPNGLNVVKFAALHEFQSELECSLTLPKFA--SYNFV 163
+P G + K A+H + +C+ T P + +YN V
Sbjct: 512 SPKGTDSTKDPAIHSLYANTKCNFTYPAVSIQAYNQV 548
>M.Javanica_Scaff10197g058039 on XP_001351513 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2152
Score = 23.9 bits (50), Expect = 6.2, Method: Composition-based stats.
Identities = 11/20 (55%), Positives = 13/20 (65%)
Query: 115 LEAEYLLKRKPDILTPNGLN 134
LE Y+ KRK +I T NG N
Sbjct: 1445 LEGYYISKRKIEICTENGEN 1464
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1030g012166
(138 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_845633 VSG (Establishment) [Trypanosoma brucei] 24 4.6
>M.Javanica_Scaff1030g012166 on XP_845633 VSG (Establishment) [Trypanosoma brucei]
Length = 488
Score = 23.9 bits (50), Expect = 4.6, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 40 PVMAQEIAEETDKDPVLSTVK 60
P+ +EI + D +PV +T+K
Sbjct: 369 PLATEEITYDNDNNPVKTTIK 389
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10183g057986
(54 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10248g058207
(327 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_804722 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.3
XP_816303 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 5.1
XP_821154 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 7.4
XP_812720 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 8.3
XP_819381 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 9.9
>M.Javanica_Scaff10248g058207 on XP_804722 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 151
Score = 25.8 bits (55), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 62 NGNPLNAAKFTGASSGCIDIDGVNHPEGVEYERQNKHFKYRCVNGQEEVS 111
+G + FTG +S +D+ GV P + +K Y G E VS
Sbjct: 85 DGGDCSNVSFTGVASWYLDLSGVAGPTEISTAGASKFGAYPLKEGSEGVS 134
>M.Javanica_Scaff10248g058207 on XP_816303 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 955
Score = 25.4 bits (54), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 79 IDIDGVNHPEGVEYERQNKHFKYRCVNGQEEV 110
+ DG +HP VE+E+ C +G+ V
Sbjct: 309 MSADGCSHPSVVEWEKDKLMMMTACDDGRRRV 340
>M.Javanica_Scaff10248g058207 on XP_821154 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 951
Score = 25.0 bits (53), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 71 FTGASSGCIDIDGVNHPEGVEYERQNKHFKYRCVNGQEE 109
FTG +SG + +D E ++ + N H C + +EE
Sbjct: 127 FTGIASGLLTLDKRQTNEELDASKVNIHVLEECPSDKEE 165
>M.Javanica_Scaff10248g058207 on XP_812720 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1041
Score = 25.0 bits (53), Expect = 8.3, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 5/74 (6%)
Query: 145 VGQTLDIKGYWHKCMKYPNGSVIYTQASSCSTGSNEYRVGEEILLGNLRVVCGDQGYSVV 204
V + LDIKG M + T +N++R E +L VV D Y +V
Sbjct: 133 VSKHLDIKG---DSMDILTSDISLFCMQLVDTAANKFRTTE--VLRPTTVVIEDSVYMLV 187
Query: 205 GCYFYNNGQVQKLN 218
G Y + QV+ N
Sbjct: 188 GKYRHTEKQVEHTN 201
>M.Javanica_Scaff10248g058207 on XP_819381 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1046
Score = 24.6 bits (52), Expect = 9.9, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
Query: 145 VGQTLDIKGYWHKCMKYPNGSVIYTQASSCSTGSNEYRVGEEILLGNLRVVCGDQGYSVV 204
V + LDIKG M + T +N +R E +L VV D Y +V
Sbjct: 133 VSKHLDIKG---DSMDILTSDISLFCMQLVDTAANNFRTTE--VLRPTTVVIEDSVYMLV 187
Query: 205 GCYFYNNGQVQKLN 218
G Y + QV+ N
Sbjct: 188 GKYRHTEKQVEHTN 201
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10201g058046
(78 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349033 PfEMP1 (Establishment) [Plasmodium falciparum] 23 1.7
>M.Javanica_Scaff10201g058046 on XP_001349033 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2064
Score = 23.5 bits (49), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 28 NGKGGEITQRFPKQNFNINF 47
NGK GEI R+ K + + NF
Sbjct: 215 NGKKGEIETRYKKDDEDGNF 234
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10241g058189
(78 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351321 PfEMP1 (Establishment) [Plasmodium falciparum] 22 7.0
XP_813257 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 9.2
>M.Javanica_Scaff10241g058189 on XP_001351321 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3467
Score = 21.9 bits (45), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 11/55 (20%)
Query: 18 YDNLVSPSHSAANFAPQNSYELRRQ-STFDKL----------NGTKRLDFKRNER 61
Y N SH N+ +N ELR+ +D L NG K +F+ +R
Sbjct: 2804 YGNGYDMSHKVKNYFEKNENELRKWIDNYDVLKNNEEYEVCNNGDKNCNFEGKKR 2858
>M.Javanica_Scaff10241g058189 on XP_813257 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 903
Score = 21.6 bits (44), Expect = 9.2, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 3 MADKTSLSSPDSNEIYDNLVSPSHSAA 29
+ DK+S SP S++ D SP +AA
Sbjct: 736 LKDKSSEPSPVSSDSVDTNASPVTAAA 762
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10203g058055
(245 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum] 26 3.3
AAK49521 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum] 25 7.2
>M.Javanica_Scaff10203g058055 on XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1711
Score = 25.8 bits (55), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 195 VHYE-NERELGNKDYLQYFRGGVITSYSIHYTKLYEIFSIDQILD 238
HYE N+++ GN D +G TS +++Y Y F I+D
Sbjct: 557 CHYEKNDKDDGNGDINNCIQGDWKTSKNVYYPISYYSFFYGSIID 601
>M.Javanica_Scaff10203g058055 on AAK49521 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum]
Length = 1210
Score = 24.6 bits (52), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 7/81 (8%)
Query: 99 TFDDGTEASINRQISDDLFENDILLTLNQAEDILKEIKQSP------NLRRRSGRQAISN 152
TF DGT SIN I++ D T N +E + P N+ + SG ++ S
Sbjct: 765 TFGDGTPISINANINEQQSGKDTSNTGN-SETSDSPVSHEPESDAAINVEKLSGDESSSE 823
Query: 153 TRSFWENTTIPYTFNVAQTND 173
TR + T NV + +D
Sbjct: 824 TRGILDINDPSVTNNVNEVHD 844
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10294g058339
(89 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001611147 variant erythrocyte surface antigen-1, alpha subun... 25 0.80
XP_819012 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.1
XP_001349031 PfEMP1 (Establishment) [Plasmodium falciparum] 24 1.6
XP_966151 TLP (Invasion) [Plasmodium falciparum] 23 4.7
XP_845136 VSG (Establishment) [Trypanosoma brucei] 23 5.1
AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum] 22 9.2
AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum] 22 9.6
>M.Javanica_Scaff10294g058339 on XP_001611147 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1304
Score = 25.0 bits (53), Expect = 0.80, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 25/58 (43%)
Query: 5 YGLVLYVSTISLVQAQTFFDLPGVFWAWVFHGLQARGGPSPKKYETRDSRDTRFSKKY 62
Y LV + +S Q D+ G F V + + G S K D +D+ SK+Y
Sbjct: 937 YTLVRVTAALSATTPQVLGDVFGFFRGGVGNPVVKEGEDSKKCDHITDPKDSNNSKEY 994
>M.Javanica_Scaff10294g058339 on XP_819012 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 918
Score = 24.6 bits (52), Expect = 1.1, Method: Composition-based stats.
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 38 QARGGPSPKKYETRDSRD 55
QA G PS KYE +D +D
Sbjct: 66 QAPGQPSQTKYEWKDVKD 83
>M.Javanica_Scaff10294g058339 on XP_001349031 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2275
Score = 23.9 bits (50), Expect = 1.6, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 23/54 (42%)
Query: 27 GVFWAWVFHGLQARGGPSPKKYETRDSRDTRFSKKYENEIKRDTRSLKKYEISR 80
G W VF+G+ GG + R F K+Y N ++ +S + SR
Sbjct: 1448 GETWESVFNGIPENGGKTTTITVEMIDRRGPFIKEYLNNSQKSEKSNDLFNASR 1501
>M.Javanica_Scaff10294g058339 on XP_966151 TLP (Invasion) [Plasmodium falciparum]
Length = 1371
Score = 22.7 bits (47), Expect = 4.7, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Query: 46 KKYETRD---SRDTRFSKKYENEIKRDTRSLKKYEI 78
KK E D + S Y NE++R RSL EI
Sbjct: 1052 KKQENIDILSKEEDNISSNYNNELQRTKRSLDFPEI 1087
>M.Javanica_Scaff10294g058339 on XP_845136 VSG (Establishment) [Trypanosoma brucei]
Length = 481
Score = 22.7 bits (47), Expect = 5.1, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 43 PSPKKYETRDSRDTRFSKKYENEIKRDTRSLKKYEISRDT--RPRDTR 88
P + + +D DT F K N + + +++Y + +DT +P T+
Sbjct: 307 PETTEKQLQDQIDTVFGKDPANFTNNNWKLVEEYTLPKDTAGKPAGTQ 354
>M.Javanica_Scaff10294g058339 on AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2969
Score = 21.9 bits (45), Expect = 9.2, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 55 DTRFSKKYENEIKRDTRSLKKYEI 78
D ++Y N +K + LKKY+I
Sbjct: 2065 DYNLLQQYLNYMKNEMEQLKKYKI 2088
>M.Javanica_Scaff10294g058339 on AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2965
Score = 21.9 bits (45), Expect = 9.6, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 55 DTRFSKKYENEIKRDTRSLKKYEI 78
D ++Y N +K + LKKY+I
Sbjct: 2069 DYNLLQQYLNYMKNEMEQLKKYKI 2092
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10266g058260
(105 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10168g057938
(616 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ABA06450 MSA-2a1 (Invasion) [Babesia bovis] 25 9.5
>M.Javanica_Scaff10168g057938 on ABA06450 MSA-2a1 (Invasion) [Babesia bovis]
Length = 316
Score = 25.4 bits (54), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 18/92 (19%)
Query: 147 YKMMVLEKSNVLDEILFEALESNDMKTLFKIFFAHPRHEILPLIEKQ-EEFYPF------ 199
+K V K+++ D +F+ L+ D +FK +PLI+K EF F
Sbjct: 84 FKEKVPFKTSLFDNSVFDNLKYQDTDEIFKSLLLR-----VPLIKKMLSEFNAFLNDNPP 138
Query: 200 ------EEKLTKLYLNKKSKKENELKEYEEIM 225
+EK+T+ Y SK++ E+K+Y+ ++
Sbjct: 139 HMLTNGKEKMTEYYKKNISKEDGEVKDYKTMV 170
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10246g058202
(281 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAP33064 Vps26 (Establishment) [Entamoeba histolytica] 26 2.9
XP_001611365 variant erythrocyte surface antigen-1, alpha subun... 24 9.9
>M.Javanica_Scaff10246g058202 on AAP33064 Vps26 (Establishment) [Entamoeba histolytica]
Length = 328
Score = 25.8 bits (55), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 11/54 (20%)
Query: 19 YCFGKPIHVELKIKDDW----------KEKREF-IYLKNVELEDRFVVKLIEKK 61
+ FG PI +++ + +D K+K E IY+KN ++ + V+ L +KK
Sbjct: 1 FLFGTPIQIDILLDNDHEKQKVTKIVNKQKTEIPIYMKNEDVNGKVVITLKDKK 54
>M.Javanica_Scaff10246g058202 on XP_001611365 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1335
Score = 24.3 bits (51), Expect = 9.9, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 28/50 (56%)
Query: 166 IENYKNKLLSSYWTEINLIGYKIELLEKQNVEYQKKLKSKIIEIGNKITQ 215
+E+ + K + E+ + K++LLE + + +K K+ ++ IG+ + Q
Sbjct: 638 MEHDRTKRVDKVKEELGKVVKKVKLLEGEKADGIEKAKALLVAIGDVVVQ 687
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10223g058125
(183 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_821714 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.5
XP_819146 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.2
XP_818344 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 9.5
>M.Javanica_Scaff10223g058125 on XP_821714 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 827
Score = 26.2 bits (56), Expect = 1.5, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 13/64 (20%)
Query: 51 SWAATIGTDVKQWIEINYRNKKPHKIGIPKTTQLTPNGLSFFLKLVLSNKEKPRKRRNVL 110
SW +GT + W + +N KP + G F +L + E K+R V+
Sbjct: 327 SWTEALGTLSRVWGNEHDKNVKPVRSG-------------FITATILVDGEDDNKKRTVM 373
Query: 111 IDTL 114
+ TL
Sbjct: 374 LVTL 377
>M.Javanica_Scaff10223g058125 on XP_819146 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 825
Score = 25.4 bits (54), Expect = 2.2, Method: Composition-based stats.
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 13 VSDYPDNKPNKYRVHLPKPIEFQGGN 38
V+D + PN+ +VH+ +P GN
Sbjct: 134 VADQESDSPNERKVHVSRPTTVVNGN 159
>M.Javanica_Scaff10223g058125 on XP_818344 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 928
Score = 23.5 bits (49), Expect = 9.5, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 50 QSWAATIGTDVKQWIEINYRNKKPHKIG-IPKTTQLTPNGLSFFLKL--VLSNKEKPRKR 106
+SW +GT + W+ + +N K + G I T N + L V S K++ +K
Sbjct: 330 ESWTEALGTLSRVWVNKHEKNVKRARSGFITATIDGDENNRNVMLVTLPVYSEKDESKKE 389
Query: 107 RNVL 110
VL
Sbjct: 390 TGVL 393
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10296g058347
(91 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351221 CTRP (Adhesin) [Plasmodium falciparum] 27 0.24
XP_814753 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.7
XP_820670 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.7
>M.Javanica_Scaff10296g058347 on XP_001351221 CTRP (Adhesin) [Plasmodium falciparum]
Length = 2112
Score = 26.6 bits (57), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Query: 67 KFGVKCLE--SIEVLSCPFYLGC 87
K+G C+E SIE SCP GC
Sbjct: 1569 KYGSSCMELKSIEYRSCPINAGC 1591
>M.Javanica_Scaff10296g058347 on XP_814753 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 882
Score = 23.1 bits (48), Expect = 3.7, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 51 NSTQPIKLTINRDNETKFGVKC 72
+S P+ L ++ DNE K+ V C
Sbjct: 598 DSENPVLLGLSYDNENKWRVLC 619
>M.Javanica_Scaff10296g058347 on XP_820670 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 883
Score = 23.1 bits (48), Expect = 3.7, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 51 NSTQPIKLTINRDNETKFGVKC 72
+S P+ L ++ DNE K+ V C
Sbjct: 599 DSENPVLLGLSYDNENKWRVLC 620
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10210g058074
(91 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_808062 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.4
XP_966160 PfEMP1 (Establishment) [Plasmodium falciparum] 23 5.2
XP_807986 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.2
XP_812956 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.4
XP_812613 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.9
>M.Javanica_Scaff10210g058074 on XP_808062 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 825
Score = 23.5 bits (49), Expect = 2.4, Method: Composition-based stats.
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 39 NSEYKRSLIDKEFIPHFH 56
N+EY ++L D I HF+
Sbjct: 651 NAEYDKNLFDSHRISHFY 668
>M.Javanica_Scaff10210g058074 on XP_966160 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2394
Score = 22.7 bits (47), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 9 DGSQLYCTSPRTTIGSCHRFDQSVMGILNVNSEYKRSLIDKE 50
D + +C +P TT + F Q++ N E K+ + E
Sbjct: 1613 DNDKQFCGTPETTCNTAEAFLQNLGSCKKYNGEGKKIFENTE 1654
>M.Javanica_Scaff10210g058074 on XP_807986 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1054
Score = 22.7 bits (47), Expect = 5.2, Method: Composition-based stats.
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 39 NSEYKRSLIDKEFIPHFH 56
N+EY SL D I HF+
Sbjct: 662 NTEYNTSLFDLHRISHFY 679
>M.Javanica_Scaff10210g058074 on XP_812956 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1005
Score = 22.7 bits (47), Expect = 5.4, Method: Composition-based stats.
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 39 NSEYKRSLIDKEFIPHFH 56
N YK+SL + I HF+
Sbjct: 615 NKRYKKSLFNSHRISHFY 632
>M.Javanica_Scaff10210g058074 on XP_812613 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1038
Score = 22.3 bits (46), Expect = 5.9, Method: Composition-based stats.
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 39 NSEYKRSLIDKEFIPHFH 56
N+EY SL D I HF+
Sbjct: 646 NTEYNTSLFDFHRISHFY 663
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10261g058244
(208 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_828099 VSG (Establishment) [Trypanosoma brucei] 27 0.71
XP_812607 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 5.3
XP_810286 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 5.8
XP_815662 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 5.9
XP_807738 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 8.2
>M.Javanica_Scaff10261g058244 on XP_828099 VSG (Establishment) [Trypanosoma brucei]
Length = 527
Score = 27.3 bits (59), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 159 AAFFSWHNEYCKRYEILVRKRNPSLALHYLDSTLDSPL-PTPADSVLFTD 207
AA + W E CK + L+ +PS L +L + P P +L +D
Sbjct: 476 AAGYKWEGETCKDFSFLLNNTSPSWFLLHLWLCFSKRIFPFPLKRILLSD 525
>M.Javanica_Scaff10261g058244 on XP_812607 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 957
Score = 24.6 bits (52), Expect = 5.3, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 104 GQKVLKALRKEIRMISDEERNEL 126
G+KV + E+ +SDEE EL
Sbjct: 115 GEKVFTGIASELLTLSDEESKEL 137
>M.Javanica_Scaff10261g058244 on XP_810286 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 846
Score = 24.6 bits (52), Expect = 5.8, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 104 GQKVLKALRKEIRMISDEERNEL 126
G+KV + E+ +SDEE EL
Sbjct: 3 GEKVFTGIASELLTLSDEESKEL 25
>M.Javanica_Scaff10261g058244 on XP_815662 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 963
Score = 24.6 bits (52), Expect = 5.9, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 104 GQKVLKALRKEIRMISDEERNEL 126
G+KV + E+ +SDEE EL
Sbjct: 117 GEKVFTGIASELLTLSDEESKEL 139
>M.Javanica_Scaff10261g058244 on XP_807738 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 896
Score = 23.9 bits (50), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 104 GQKVLKALRKEIRMISDEERNELFK 128
G+K + E+ +SDEE EL K
Sbjct: 120 GEKAFTGIASEVLTLSDEESKELDK 144
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10261g058242
(96 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001611897 variant erythrocyte surface antigen-1, alpha subun... 23 4.8
>M.Javanica_Scaff10261g058242 on XP_001611897 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1369
Score = 22.7 bits (47), Expect = 4.8, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 39 AIAKQRKLAEKTENPQNKNELMERFLISELTETAASLDVLTR 80
A+ K +K EK K + L +LTE LD LT+
Sbjct: 725 ALGKAKKELEKARTGLEKAVKVNGGLTGKLTEAKNKLDALTK 766
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff102g001939
(317 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1024g012118
(258 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_827712 VSG (Establishment) [Trypanosoma brucei] 25 6.5
XP_001350415 PfEMP1 (Establishment) [Plasmodium falciparum] 25 7.7
>M.Javanica_Scaff1024g012118 on XP_827712 VSG (Establishment) [Trypanosoma brucei]
Length = 474
Score = 24.6 bits (52), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 8/78 (10%)
Query: 10 SILRIIFMTSFSLLHPVGALRVL-ESIKPDVQLVPSSDRQVDMKQNARLRHDAKDADQNA 68
++ R+I L H RV E++K V R +++ RH AK + +
Sbjct: 31 ALCRMINWAEERLEHIKVTKRVTQEALKIGV-------RYLEVAGEEECRHIAKAQEDSC 83
Query: 69 TGSTYDLKSNLQLFTRYW 86
T D K N L+ +W
Sbjct: 84 TKKMEDRKRNCGLYKNFW 101
>M.Javanica_Scaff1024g012118 on XP_001350415 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3056
Score = 24.6 bits (52), Expect = 7.7, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 50 DMKQNARLRHDAKDADQNA 68
DMK N LR A D D N+
Sbjct: 1811 DMKSNCNLRKGADDCDDNS 1829
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff104g001969
(126 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001611441 variant erythrocyte surface antigen-1, beta subuni... 26 0.80
XP_001609755 variant erythrocyte surface antigen-1, beta subuni... 25 1.3
XP_820062 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.8
XP_803347 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.8
XP_828098 VSG (Establishment) [Trypanosoma brucei] 23 5.1
XP_001611146 variant erythrocyte surface antigen-1, beta subuni... 23 5.2
XP_001608664 variant erythrocyte surface antigen-1, beta subuni... 23 5.6
>M.Javanica_Scaff104g001969 on XP_001611441 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1205
Score = 25.8 bits (55), Expect = 0.80, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Query: 34 NDSDKKCCRGLNCKNSRIRNIPGLIFV-YKCSKSGCVHEGN-KCDDNGWECCYGFKRNRY 91
ND + +CC + ++ PG +C G G +C N +CCY N+
Sbjct: 136 NDKEDECCLKGDKGIGKVCECPGTGGGGAQCCSPGTSGSGTCQCATNPKQCCYKSAYNKT 195
Query: 92 SKCAKCIVDGSP 103
IV+G+P
Sbjct: 196 EALWTDIVNGTP 207
>M.Javanica_Scaff104g001969 on XP_001609755 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 920
Score = 25.4 bits (54), Expect = 1.3, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 5/51 (9%)
Query: 63 CSKSGCVHEGNKCDDNGW--ECCYGFKRNRYSKCAKCIVDGSPCDRASNCC 111
C G G KC +G +CC G +C KC G+ RA N C
Sbjct: 142 CCLKGESGIGKKCTCSGGAGQCCTGSSNTPCHECEKC---GTSASRADNKC 189
>M.Javanica_Scaff104g001969 on XP_820062 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 898
Score = 23.9 bits (50), Expect = 3.8, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Query: 43 GLNCKNSRIRNIPG-LIFVYKCS 64
G+NCK I N+ G LI + C+
Sbjct: 300 GINCKEPSIANLEGNLILITSCA 322
>M.Javanica_Scaff104g001969 on XP_803347 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 688
Score = 23.5 bits (49), Expect = 4.8, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Query: 43 GLNCKNSRIRNIPG-LIFVYKCS 64
G+NCK I N+ G LI + C+
Sbjct: 147 GINCKEPSIANLEGNLILITPCA 169
>M.Javanica_Scaff104g001969 on XP_828098 VSG (Establishment) [Trypanosoma brucei]
Length = 474
Score = 23.5 bits (49), Expect = 5.1, Method: Composition-based stats.
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 21 NTSQQCSKNGEKCNDSDKKC 40
N + SK G K ND D+KC
Sbjct: 418 NKDKSNSKAGCKYNDKDRKC 437
>M.Javanica_Scaff104g001969 on XP_001611146 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 958
Score = 23.5 bits (49), Expect = 5.2, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 11/39 (28%)
Query: 96 KCIVDGSPCDRASNCCSG-----EC------DSSTLKCY 123
KC G +NCCSG EC DS++ KCY
Sbjct: 157 KCKCAGGTGGGVTNCCSGGTASHECETCGTSDSASNKCY 195
>M.Javanica_Scaff104g001969 on XP_001608664 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1116
Score = 23.5 bits (49), Expect = 5.6, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 11/39 (28%)
Query: 96 KCIVDGSPCDRASNCCSG-----EC------DSSTLKCY 123
KC G +NCCSG EC DS++ KCY
Sbjct: 157 KCKCAGGTGGGVTNCCSGGTASHECETCGTSDSASNKCY 195
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1042g012262
(75 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609033 variant erythrocyte surface antigen-1, alpha subun... 33 5e-04
XP_001609754 variant erythrocyte surface antigen-1, alpha subun... 28 0.036
XP_821693 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.29
XP_001609751 variant erythrocyte surface antigen-1, alpha subun... 25 0.40
XP_001608795 variant erythrocyte surface antigen-1, alpha subun... 25 0.44
XP_001609041 variant erythrocyte surface antigen-1, alpha subun... 24 0.84
XP_001609034 variant erythrocyte surface antigen-1, alpha subun... 24 0.87
XP_001609667 variant erythrocyte surface antigen-1, alpha subun... 24 0.97
XP_001609167 variant erythrocyte surface antigen-1, alpha subun... 24 1.0
XP_001609101 variant erythrocyte surface antigen-1, alpha subun... 23 1.5
XP_001609163 variant erythrocyte surface antigen-1, alpha subun... 23 1.5
XP_001608796 variant erythrocyte surface antigen-1, alpha subun... 23 1.5
XP_001611897 variant erythrocyte surface antigen-1, alpha subun... 23 2.6
XP_001608670 variant erythrocyte surface antigen-1, alpha subun... 23 2.6
XP_001610497 variant erythrocyte surface antigen-1, alpha subun... 23 3.2
XP_001610713 variant erythrocyte surface antigen-1, alpha subun... 22 3.7
XP_001352170 MSP1 (Invasion) [Plasmodium falciparum] 22 5.1
XP_001611206 variant erythrocyte surface antigen-1, alpha subun... 22 5.3
XP_001351517 PfEMP1 (Establishment) [Plasmodium falciparum] 22 5.4
AAK31223 variable surface protein 0a (Establishment) [Giardia... 21 8.0
AAK31228 variable surface protein 14b (Establishment) [Giardi... 21 8.0
AAK31233 variable surface protein 14g (Establishment) [Giardi... 21 8.2
XP_001350796 PfEMP1 (Establishment) [Plasmodium falciparum] 22 8.2
>M.Javanica_Scaff1042g012262 on XP_001609033 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1270
Score = 33.1 bits (74), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Query: 25 DPDAENKRDCCGDNYYCFKLKCTKCIDSGNGCG-----KDKPPC-CSQFCMPGGKC 74
D D+ENK D CG + + + G GC K K PC C+ C PG +C
Sbjct: 92 DKDSENKCDTCGCMKWVKPQRGIDWVQLGRGCQRCKDEKQKTPCSCASGCSPGEEC 147
Score = 25.8 bits (55), Expect = 0.27, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 11/24 (45%)
Query: 45 KCTKCIDSGNGCGKDKPPCCSQFC 68
KC+ C D N CGK P C
Sbjct: 799 KCSACQDHSNKCGKTPKPTTCPTC 822
>M.Javanica_Scaff1042g012262 on XP_001609754 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1295
Score = 28.1 bits (61), Expect = 0.036, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 26/60 (43%), Gaps = 14/60 (23%)
Query: 25 DPDAENKRDCCGDNYYCFK----------LKCTKCIDSGNGCGKDKPPCCSQFCMPGGKC 74
D ENK D CG + K KCT+C DSG G K CS C PG +C
Sbjct: 149 DKTPENKCDSCGCMKWKVKDPNNEGTPLGRKCTRCSDSG-GSSTCK---CSGTCSPGQQC 204
>M.Javanica_Scaff1042g012262 on XP_821693 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 834
Score = 25.4 bits (54), Expect = 0.29, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 11/22 (50%)
Query: 13 INEACIGNGQDCDPDAENKRDC 34
+ E CI G C D E KR C
Sbjct: 147 VPEGCICEGGKCPADKEEKRVC 168
>M.Javanica_Scaff1042g012262 on XP_001609751 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1298
Score = 25.0 bits (53), Expect = 0.40, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 45 KCTKCIDSGNGCGKDKPPCCSQFCM 69
KC+ C G+ CG+ P Q C+
Sbjct: 815 KCSACDQHGDKCGQPSNPTICQTCL 839
>M.Javanica_Scaff1042g012262 on XP_001608795 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1323
Score = 25.0 bits (53), Expect = 0.44, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 41 CFKLKCTKCIDSGNGCGKDKPPCCSQFCM 69
C KC+ C N CGK P + C+
Sbjct: 829 CNTAKCSACDQHSNKCGKPSQPGICEKCL 857
>M.Javanica_Scaff1042g012262 on XP_001609041 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1318
Score = 24.3 bits (51), Expect = 0.84, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 12/29 (41%)
Query: 41 CFKLKCTKCIDSGNGCGKDKPPCCSQFCM 69
C KC+ C CGK P Q C+
Sbjct: 834 CNSPKCSACESHSTKCGKPPTPSFCQTCL 862
>M.Javanica_Scaff1042g012262 on XP_001609034 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1313
Score = 24.3 bits (51), Expect = 0.87, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 14/35 (40%), Gaps = 4/35 (11%)
Query: 41 CFKLKCTKCIDSGNGCG----KDKPPCCSQFCMPG 71
C C+ CID CG K P C Q M G
Sbjct: 814 CSSPMCSACIDHATKCGRQGEKKTCPTCHQQYMDG 848
>M.Javanica_Scaff1042g012262 on XP_001609667 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1303
Score = 24.3 bits (51), Expect = 0.97, Method: Composition-based stats.
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 41 CFKLKCTKCIDSGNGCGKDKPPCCSQFC 68
C KC C+D + CG++ P C
Sbjct: 817 CNTAKCLTCMDHSSKCGQEGKPYRCTVC 844
Score = 22.3 bits (46), Expect = 4.4, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 18/46 (39%)
Query: 25 DPDAENKRDCCGDNYYCFKL--------------KCTKCIDSGNGC 56
D + ENK D CG C K +CT+C S +GC
Sbjct: 143 DIEPENKCDTCG----CIKWTQSKPGTEGVPLGRRCTRCSGSRDGC 184
>M.Javanica_Scaff1042g012262 on XP_001609167 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1317
Score = 24.3 bits (51), Expect = 1.0, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 8/33 (24%)
Query: 45 KCTKCIDSGNGCGKDKPPCCSQFCMPGG--KCS 75
+CTKC+D+G G+D C S PGG +CS
Sbjct: 182 RCTKCMDNG---GRDPCNCSSG---PGGVTQCS 208
Score = 23.5 bits (49), Expect = 1.4, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 12/29 (41%)
Query: 41 CFKLKCTKCIDSGNGCGKDKPPCCSQFCM 69
C KC C + CG+ P Q C+
Sbjct: 840 CNSPKCPGCTKHSDKCGQPPKPTVCQTCL 868
>M.Javanica_Scaff1042g012262 on XP_001609101 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1359
Score = 23.5 bits (49), Expect = 1.5, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 12/29 (41%)
Query: 41 CFKLKCTKCIDSGNGCGKDKPPCCSQFCM 69
C KC C + CG+ P Q C+
Sbjct: 876 CNTPKCPGCTKHSDKCGQPPKPTVCQTCL 904
Score = 22.7 bits (47), Expect = 3.6, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 18/44 (40%)
Query: 25 DPDAENKRDCCGDNYYCFKL--------------KCTKCIDSGN 54
D ENK D CG C K KCT+C DSG+
Sbjct: 153 DVKHENKCDACG----CMKWNVTNADNEGTPLGRKCTRCSDSGS 192
>M.Javanica_Scaff1042g012262 on XP_001609163 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1360
Score = 23.5 bits (49), Expect = 1.5, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 12/29 (41%)
Query: 41 CFKLKCTKCIDSGNGCGKDKPPCCSQFCM 69
C KC C + CG+ P Q C+
Sbjct: 876 CNTPKCPGCTKHSDKCGQPPKPTVCQTCL 904
>M.Javanica_Scaff1042g012262 on XP_001608796 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1261
Score = 23.5 bits (49), Expect = 1.5, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 9/45 (20%)
Query: 25 DPDAENKRDCCGDNYYC---------FKLKCTKCIDSGNGCGKDK 60
D D+ENK CG Y CT+C DSG+ K K
Sbjct: 107 DKDSENKCGTCGCMKYVVINGTDWVQLGRGCTRCKDSGSEDDKKK 151
>M.Javanica_Scaff1042g012262 on XP_001611897 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1369
Score = 23.1 bits (48), Expect = 2.6, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 4/35 (11%)
Query: 41 CFKLKCTKCIDSGNGCG----KDKPPCCSQFCMPG 71
C KC C D N CG K P C Q M G
Sbjct: 850 CNSPKCPPCNDHINKCGRQGEKKTCPTCHQQYMDG 884
>M.Javanica_Scaff1042g012262 on XP_001608670 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1320
Score = 23.1 bits (48), Expect = 2.6, Method: Composition-based stats.
Identities = 9/28 (32%), Positives = 11/28 (39%)
Query: 41 CFKLKCTKCIDSGNGCGKDKPPCCSQFC 68
C KC C CGK+ P + C
Sbjct: 841 CNSPKCPSCKSHSTKCGKEGKPTICKTC 868
>M.Javanica_Scaff1042g012262 on XP_001610497 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1315
Score = 22.7 bits (47), Expect = 3.2, Method: Composition-based stats.
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 45 KCTKCIDSGNGCGKDKPPCCSQFC 68
+C C D + CGK P + C
Sbjct: 823 RCVHCKDHKDKCGKTPKPTICKTC 846
>M.Javanica_Scaff1042g012262 on XP_001610713 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1294
Score = 22.3 bits (46), Expect = 3.7, Method: Composition-based stats.
Identities = 8/11 (72%), Positives = 9/11 (81%)
Query: 45 KCTKCIDSGNG 55
+CTKC DSG G
Sbjct: 155 RCTKCSDSGGG 165
Score = 21.9 bits (45), Expect = 6.4, Method: Composition-based stats.
Identities = 8/29 (27%), Positives = 12/29 (41%)
Query: 41 CFKLKCTKCIDSGNGCGKDKPPCCSQFCM 69
C KC+ C CG+ P + C+
Sbjct: 799 CNTPKCSACDSHSKKCGQPSTPSICRTCL 827
>M.Javanica_Scaff1042g012262 on XP_001352170 MSP1 (Invasion) [Plasmodium falciparum]
Length = 1720
Score = 21.9 bits (45), Expect = 5.1, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 14/35 (40%)
Query: 14 NEACIGNGQDCDPDAENKRDCCGDNYYCFKLKCTK 48
N C N CD DA + G + +CTK
Sbjct: 1652 NPTCNENNGGCDADATCTEEDSGSSRKKITCECTK 1686
>M.Javanica_Scaff1042g012262 on XP_001611206 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1285
Score = 21.9 bits (45), Expect = 5.3, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 4/35 (11%)
Query: 41 CFKLKCTKCIDSGNGCGKD-KP---PCCSQFCMPG 71
C KC C D CG+ KP P C Q M G
Sbjct: 798 CNSPKCHNCKDHFTKCGQQPKPTICPTCHQQYMDG 832
>M.Javanica_Scaff1042g012262 on XP_001351517 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2193
Score = 21.9 bits (45), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 37 DNYYCFKLKCTKCIDSGNGC 56
D+Y K K + CI++GNG
Sbjct: 1495 DDYKKIKHKISHCINNGNGS 1514
>M.Javanica_Scaff1042g012262 on AAK31223 variable surface protein 0a (Establishment) [Giardia
duodenalis]
Length = 126
Score = 21.2 bits (43), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 35 CGDNYYCFKLKCTKCIDSGNG 55
C YY KC KC ++ NG
Sbjct: 40 CLAGYYLSSSKCVKCTENSNG 60
>M.Javanica_Scaff1042g012262 on AAK31228 variable surface protein 14b (Establishment) [Giardia
duodenalis]
Length = 126
Score = 21.2 bits (43), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 35 CGDNYYCFKLKCTKCIDSGNG 55
C YY KC KC ++ NG
Sbjct: 40 CLAGYYLSSSKCVKCTENSNG 60
>M.Javanica_Scaff1042g012262 on AAK31233 variable surface protein 14g (Establishment) [Giardia
duodenalis]
Length = 126
Score = 21.2 bits (43), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 35 CGDNYYCFKLKCTKCIDSGNG 55
C YY KC KC ++ NG
Sbjct: 40 CLAGYYLSSSKCVKCTENSNG 60
>M.Javanica_Scaff1042g012262 on XP_001350796 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2646
Score = 21.6 bits (44), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 44 LKCTKCIDSGNGCGKD 59
++C KC+ +G GC KD
Sbjct: 1052 MQCAKCMGNGQGCTKD 1067
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10517g059043
(663 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_807772 Trans-sialidase (Invasion) [Trypanosoma cruzi] 35 0.021
AAK31234 variable surface protein 21a (Establishment) [Giardi... 27 3.2
AAK31246 variable surface protein IVd (Establishment) [Giardi... 27 3.6
XP_001351563 PfEMP1 (Establishment) [Plasmodium falciparum] 27 5.0
>M.Javanica_Scaff10517g059043 on XP_807772 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 852
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 9/68 (13%)
Query: 482 PPLQLRP---MSRGIQRRGNQRRIPPPP----PPIVRRILRRPIESQQTRRFLTRQMAAT 534
PP L+P +S+ ++ ++++ PP P+V+ L+RP + + ++ T +AT
Sbjct: 738 PPGNLQPTETVSQSVEE--DEKKAPPATKPSEAPVVQATLQRPRQESEAKQVTTVGKSAT 795
Query: 535 THKLFINC 542
TH+L N
Sbjct: 796 THQLPANT 803
>M.Javanica_Scaff10517g059043 on AAK31234 variable surface protein 21a (Establishment) [Giardia
duodenalis]
Length = 165
Score = 26.6 bits (57), Expect = 3.2, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 4/42 (9%)
Query: 549 CDHWAENGECKT---NKKYMEKYCKAACELCTP-NFNLTNEC 586
C NGECKT + Y C A E C+ N T +C
Sbjct: 32 CTQAGSNGECKTCANGQTYANNNCPACAEGCSACNAGQTQQC 73
>M.Javanica_Scaff10517g059043 on AAK31246 variable surface protein IVd (Establishment) [Giardia
duodenalis]
Length = 165
Score = 26.6 bits (57), Expect = 3.6, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 4/42 (9%)
Query: 549 CDHWAENGECKT---NKKYMEKYCKAACELCTP-NFNLTNEC 586
C NGECKT + Y C A E C+ N T +C
Sbjct: 32 CTQAGSNGECKTCANGQTYANNNCPACAEGCSACNAGQTQQC 73
>M.Javanica_Scaff10517g059043 on XP_001351563 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2149
Score = 26.9 bits (58), Expect = 5.0, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 7/58 (12%)
Query: 350 FEIWRQRQQRKEWAYTSNLWSCGNEFHFSYAWMRPF-----DFLSNQ--DGLSNAYTD 400
FE W ++++++EW N + F P FL N+ DG+S+AY D
Sbjct: 634 FEKWIEQKKKEEWTKIRNHFYTQEGFGQEVGQGIPHYIILEQFLENEYFDGISDAYAD 691
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10519g059049
(238 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001611147 variant erythrocyte surface antigen-1, alpha subun... 25 6.7
>M.Javanica_Scaff10519g059049 on XP_001611147 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1304
Score = 24.6 bits (52), Expect = 6.7, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 37/86 (43%), Gaps = 7/86 (8%)
Query: 89 PCIKSSSCYRKCLGARKSITTVLDHLNKNNAKFGRVWLYIYGLTDCDYKVEWNKYNKTEN 148
P +K +KC + D + NN+K GL + K+EW ++
Sbjct: 968 PVVKEGEDSKKC-------DHITDPKDSNNSKEYFCGWCASGLREEVKKIEWIPFDTKPG 1020
Query: 149 IEFIDEMVTTLKERKQPFGFYTTKYN 174
+++D++ L++ K G +T Y+
Sbjct: 1021 GQYMDKVGKALRDIKGEKGSTSTPYS 1046
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10438g058796
(106 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350082 Rh2b (Adhesin) [Plasmodium falciparum] 26 0.57
XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum] 25 0.82
>M.Javanica_Scaff10438g058796 on XP_001350082 Rh2b (Adhesin) [Plasmodium falciparum]
Length = 1115
Score = 25.8 bits (55), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Query: 5 KILVFFLLINDAENGRKKLTDLEKWNNYVKRLGDVDSKNYSVDENGVYCKVCNIKFVTTY 64
KI L+I+DA+ K++TD N K ++ ++NY+ + NGV NI TY
Sbjct: 446 KIQAEILIIDDAKRKVKEITD-----NINKAFNEI-TENYNNENNGVIKSAKNIVDKATY 499
Query: 65 HNS 67
N+
Sbjct: 500 LNN 502
>M.Javanica_Scaff10438g058796 on XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum]
Length = 3130
Score = 25.4 bits (54), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Query: 5 KILVFFLLINDAENGRKKLTDLEKWNNYVKRLGDVDSKNYSVDENGVYCKVCNIKFVTTY 64
KI L+I+DA+ K++TD N K ++ ++NY+ + NGV NI TY
Sbjct: 2585 KIQAEILIIDDAKRKVKEITD-----NINKAFNEI-TENYNNENNGVIKSAKNIVDEATY 2638
Query: 65 HNS 67
N+
Sbjct: 2639 LNN 2641
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1059g012428
(58 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAC80459 Oligopeptidase B (Others) [Trypanosoma brucei] 27 0.068
XP_001610713 variant erythrocyte surface antigen-1, alpha subun... 22 2.7
XP_001610567 variant erythrocyte surface antigen-1, alpha subun... 22 2.8
>M.Javanica_Scaff1059g012428 on AAC80459 Oligopeptidase B (Others) [Trypanosoma brucei]
Length = 715
Score = 26.6 bits (57), Expect = 0.068, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 26 DLKEPGPEVVQGAEYFGSCLDV-IKKRYLDVIDK 58
DLK+P P ++ G +G C++ R+L +D+
Sbjct: 470 DLKKPNPTMLYGYGSYGICIEPEFNSRFLPYVDR 503
>M.Javanica_Scaff1059g012428 on XP_001610713 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1294
Score = 21.9 bits (45), Expect = 2.7, Method: Composition-based stats.
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 31 GPEVVQGAEYFGSCLDVI 48
G V++G E FG CL V+
Sbjct: 1273 GRVVLEGVENFGQCLVVL 1290
>M.Javanica_Scaff1059g012428 on XP_001610567 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1315
Score = 21.9 bits (45), Expect = 2.8, Method: Composition-based stats.
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 31 GPEVVQGAEYFGSCLDVI 48
G V++G E FG CL V+
Sbjct: 1294 GRVVLEGVENFGQCLVVL 1311
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1053g012352
(106 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_808394 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.97
XP_965999 PfEMP1 (Establishment) [Plasmodium falciparum] 25 1.5
XP_001352240 PfEMP1 (Establishment) [Plasmodium falciparum] 25 1.5
XP_001349735 PfEMP1 (Establishment) [Plasmodium falciparum] 25 1.6
Q4VPP7 Giardin subunit alpha-3 (Others) [Giardia duodenalis] 23 2.7
AAX07976 Alpha-3 giardin (Adhesin) [Giardia duodenalis] 23 2.7
>M.Javanica_Scaff1053g012352 on XP_808394 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 912
Score = 25.0 bits (53), Expect = 0.97, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 78 LGRASTDLLGNYTVEGCAGDFGAWNDPDP 106
G D G Y+ E GD+ A N P P
Sbjct: 68 FGTTVDDYYGGYSSESLPGDYRAANPPVP 96
>M.Javanica_Scaff1053g012352 on XP_965999 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1325
Score = 24.6 bits (52), Expect = 1.5, Method: Composition-based stats.
Identities = 7/11 (63%), Positives = 10/11 (90%)
Query: 58 WENDDEMGNIP 68
WEND++ GN+P
Sbjct: 1210 WENDNDGGNVP 1220
>M.Javanica_Scaff1053g012352 on XP_001352240 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1315
Score = 24.6 bits (52), Expect = 1.5, Method: Composition-based stats.
Identities = 7/11 (63%), Positives = 10/11 (90%)
Query: 58 WENDDEMGNIP 68
WEND++ GN+P
Sbjct: 1200 WENDNDGGNVP 1210
>M.Javanica_Scaff1053g012352 on XP_001349735 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 431
Score = 24.6 bits (52), Expect = 1.6, Method: Composition-based stats.
Identities = 7/11 (63%), Positives = 10/11 (90%)
Query: 58 WENDDEMGNIP 68
WEND++ GN+P
Sbjct: 316 WENDNDGGNVP 326
>M.Javanica_Scaff1053g012352 on Q4VPP7 Giardin subunit alpha-3 (Others) [Giardia duodenalis]
Length = 255
Score = 23.5 bits (49), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Query: 18 IAFIQCRTRC-----VRARGRVICPTDPDSHFNVEVKLMDSDTL 56
IA + C+ VRA+ R +PD H N +K D+ T+
Sbjct: 24 IAEVACKYSASDREKVRAQYRSTYSIEPDDHINKMLKGGDAATI 67
>M.Javanica_Scaff1053g012352 on AAX07976 Alpha-3 giardin (Adhesin) [Giardia duodenalis]
Length = 255
Score = 23.5 bits (49), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Query: 18 IAFIQCRTRC-----VRARGRVICPTDPDSHFNVEVKLMDSDTL 56
IA + C+ VRA+ R +PD H N +K D+ T+
Sbjct: 24 IAEVACKYSASDREKVRAQYRSTYSIEPDDHINKMLKGGDAATI 67
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10395g058652
(660 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum] 27 4.9
XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum] 26 9.2
>M.Javanica_Scaff10395g058652 on XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum]
Length = 3130
Score = 26.9 bits (58), Expect = 4.9, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 90 KVSEEQNIIIIKKHFFHVIYEINFE-NSLQKIGSAKANSAVNTLSGPY------IQNFYK 142
K++E QNI I+K F ++ +IN + L + S ++ T + Y IQ+ YK
Sbjct: 2344 KINETQNIDILKNEFNNIKTKINDKVKELVHVDSTLTLESIQTFNNLYGDLMSNIQDVYK 2403
Query: 143 -NDLNNFHTK 151
D+NN K
Sbjct: 2404 YEDINNVELK 2413
>M.Javanica_Scaff10395g058652 on XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2980
Score = 25.8 bits (55), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 9/18 (50%), Positives = 14/18 (77%)
Query: 99 IIKKHFFHVIYEINFENS 116
+ K +FFHV+YE+N E +
Sbjct: 657 LFKGYFFHVMYELNNEEA 674
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1038g012224
(275 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001608670 variant erythrocyte surface antigen-1, alpha subun... 30 0.18
AAX07972 alpha-18 giardin (Others) [Giardia duodenalis] 27 0.97
XP_001609450 variant erythrocyte surface antigen-1, alpha subun... 27 1.6
>M.Javanica_Scaff1038g012224 on XP_001608670 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1320
Score = 30.0 bits (66), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 152 CTEEYREEFRKFQWIFDVVDAMGKVPAAV 180
C REE +K +W+F+ +A G+ +V
Sbjct: 1027 CASGLREEVKKIEWVFNGTEAGGQYMGSV 1055
>M.Javanica_Scaff1038g012224 on AAX07972 alpha-18 giardin (Others) [Giardia duodenalis]
Length = 255
Score = 26.9 bits (58), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 40 LTREELLQLNEDYDPGYEKDVGKFVGDFFSDSSS-QLIIDL 79
+T+E+ L ++ED+ Y VG + S SSS L+I++
Sbjct: 26 MTQEQRLTISEDFQEQYGSSVGDHIRKLMSPSSSTSLLINM 66
>M.Javanica_Scaff1038g012224 on XP_001609450 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1309
Score = 26.9 bits (58), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 4/34 (11%)
Query: 152 CTEEYREEFRKFQWIFDVVDAMG----KVPAAVV 181
C R+E +K +W+F+ +A G KV A++
Sbjct: 1005 CASGLRDEVQKIEWVFNGTEAGGHYMDKVGTALI 1038
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10545g059136
(130 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_828092 VSG (Establishment) [Trypanosoma brucei] 26 0.80
XP_805897 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.7
XP_808562 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.7
XP_804895 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.7
XP_807740 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.2
XP_816821 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.6
XP_804223 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 6.2
XP_001351563 PfEMP1 (Establishment) [Plasmodium falciparum] 23 7.6
>M.Javanica_Scaff10545g059136 on XP_828092 VSG (Establishment) [Trypanosoma brucei]
Length = 532
Score = 25.8 bits (55), Expect = 0.80, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 46 AAWEITCGMKRKKRDVNNR---IENDSSHIFTKFAKKNNNPPQEIERLSTADKYRA 98
AAW C + + K+ + NR +++D S+ F AK + +L++AD +A
Sbjct: 34 AAWSPLCTLSKDKQKLYNRANKLQDDISNFFQTAAKASIKAAIVAVKLNSADAMKA 89
>M.Javanica_Scaff10545g059136 on XP_805897 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 755
Score = 24.3 bits (51), Expect = 2.7, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 51 TCGMKRKKRDVNNRIENDSSHIFT 74
+ G +RK R+ +R N S H+FT
Sbjct: 22 SSGRRRKGREGEHRRPNMSRHVFT 45
>M.Javanica_Scaff10545g059136 on XP_808562 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 755
Score = 24.3 bits (51), Expect = 2.7, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 51 TCGMKRKKRDVNNRIENDSSHIFT 74
+ G +RK R+ +R N S H+FT
Sbjct: 22 SSGRRRKGREGEHRRPNMSRHVFT 45
>M.Javanica_Scaff10545g059136 on XP_804895 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 787
Score = 24.3 bits (51), Expect = 2.7, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 51 TCGMKRKKRDVNNRIENDSSHIFT 74
+ G +RK R+ +R N S H+FT
Sbjct: 22 SSGRRRKGREGEHRRPNMSRHVFT 45
>M.Javanica_Scaff10545g059136 on XP_807740 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 681
Score = 24.3 bits (51), Expect = 3.2, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 5/56 (8%)
Query: 32 GLMKLCPPGGESFTAAWEITCGMKRKKRDVNNRIENDSSHIFTKFAKKNNNPPQEI 87
G+ L G E F A K +DV +S + T+ +K +N P EI
Sbjct: 89 GVPSLLKVGSEVFAVA-----EAKNTGKDVQGSFTGIASQLLTETVEKKDNTPVEI 139
>M.Javanica_Scaff10545g059136 on XP_816821 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 782
Score = 23.9 bits (50), Expect = 3.6, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 53 GMKRKKRDVNNRIENDSSHIFT 74
G +R+KR+ R+ N S +FT
Sbjct: 24 GRRREKRESEQRMPNMSRRVFT 45
>M.Javanica_Scaff10545g059136 on XP_804223 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 746
Score = 23.5 bits (49), Expect = 6.2, Method: Composition-based stats.
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 60 DVNNRIENDSSHIFTKFAKKNNNPPQE 86
DV+ E+ S I T +AK N + P++
Sbjct: 431 DVSVAFESKSEEITTSYAKLNEDDPEK 457
>M.Javanica_Scaff10545g059136 on XP_001351563 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2149
Score = 23.1 bits (48), Expect = 7.6, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Query: 49 EITCGMKRKKRDVNNRIENDSSHIFTKF----AKKNNNPPQEIERLSTADK 95
++ G K+KK+ ++EN+ IF K K NN ER +K
Sbjct: 200 DLYSGNKKKKQTEREKLENNLKTIFGKIHSDVTKSGNNKDALQERYQKDEK 250
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1050g012324
(264 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_804171 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.2
XP_001352170 MSP1 (Invasion) [Plasmodium falciparum] 25 7.3
XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum] 25 8.4
XP_001611147 variant erythrocyte surface antigen-1, alpha subun... 24 9.6
>M.Javanica_Scaff1050g012324 on XP_804171 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 787
Score = 25.4 bits (54), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 6/75 (8%)
Query: 126 AQAWADKCTYSHSNPY-----GNYGENFYAYARMDNDSAAIEYVVKGWWSELIYRGALG- 179
+ +A YS N + G+Y F + +R+ + + I V+K W + + L
Sbjct: 429 GEEFASTLMYSDGNLHLLQQRGDYESTFMSLSRLTEELSTINSVLKNWAQKDAFFSKLSI 488
Query: 180 PYPGQDCVAFDAPQN 194
P G V D N
Sbjct: 489 PTAGLVAVLSDTASN 503
>M.Javanica_Scaff1050g012324 on XP_001352170 MSP1 (Invasion) [Plasmodium falciparum]
Length = 1720
Score = 24.6 bits (52), Expect = 7.3, Method: Composition-based stats.
Identities = 10/17 (58%), Positives = 12/17 (70%)
Query: 49 NKTGEFLPKAKDMKKME 65
+K EF+PK KDM K E
Sbjct: 692 DKLKEFIPKVKDMLKKE 708
>M.Javanica_Scaff1050g012324 on XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2994
Score = 24.6 bits (52), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 9/58 (15%)
Query: 69 ELEKQAQAWADKCTYSHSNPYGNYGENFYAYARMDNDFSTKSKRYEKNGIFLELEKQA 126
EL+KQ + + N NY +NFY T +K+Y +FL+ K+
Sbjct: 395 ELDKQKNKYTKEIEKLKDNSKSNYDKNFYL---------TLTKKYGSINLFLDTLKEG 443
>M.Javanica_Scaff1050g012324 on XP_001611147 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1304
Score = 24.3 bits (51), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 20/47 (42%), Gaps = 9/47 (19%)
Query: 203 QLAWWNTNLVG------CGIGRCPKYKSYVVCQY---KPPGNVYTAC 240
QLA + LVG C IG C K CQY K P N AC
Sbjct: 106 QLAQVLSALVGWSRIDKCSIGSCDHGKKGSTCQYLQDKTPENKCGAC 152
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1040g012246
(693 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001347691 PfEMP1 (Establishment) [Plasmodium falciparum] 28 1.8
XP_815905 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 2.2
XP_806901 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 3.7
P13404 GRA2 (Establishment) [Toxoplasma gondii] 26 5.4
XP_001349034 PfEMP1 (Establishment) [Plasmodium falciparum] 27 5.5
XP_805202 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 8.2
XP_813726 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 9.5
>M.Javanica_Scaff1040g012246 on XP_001347691 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2182
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 106 NELEEENEQNSSSCLEKIFNEFNQDPLEELLKDNIDEKRERSKLLELLIKDRNESLA 162
N E+ N+Q +S ++K FN F + +LKD+I R+K L+ I + NES A
Sbjct: 628 NGKEKVNKQKTSHEMQKTFNPFFYYWVVHMLKDSI---HWRTKKLDKCINNSNESKA 681
>M.Javanica_Scaff1040g012246 on XP_815905 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 888
Score = 28.1 bits (61), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Query: 416 EILERIVEGNGDD----GFVNENEDDVISEEDDRDVGKTSEQGNDSIASYGSEYD--DLS 469
++ + + G+GD G E V S ED G+T QG + I S+ E + L+
Sbjct: 792 DVAQTVATGSGDTMQGIGSPQTPEVSVSSAEDAETAGRTDAQGEEGIHSHNGEVNATALN 851
Query: 470 SNLKCLS 476
S+L LS
Sbjct: 852 SSLGNLS 858
>M.Javanica_Scaff1040g012246 on XP_806901 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 369
Score = 26.9 bits (58), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 6/62 (9%)
Query: 421 IVEGNGD----DGFVNENEDDVISEEDDRDVGKTSEQGNDSIASYGSEYDD--LSSNLKC 474
+V G+GD DG E V S D G+T QG + I E LSS+L
Sbjct: 276 VVTGSGDKIQGDGSPQTPEVSVSSGADGETTGRTDAQGEEGIHPQAGEVKSAALSSSLGN 335
Query: 475 LS 476
LS
Sbjct: 336 LS 337
>M.Javanica_Scaff1040g012246 on P13404 GRA2 (Establishment) [Toxoplasma gondii]
Length = 185
Score = 26.2 bits (56), Expect = 5.4, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 628 PIPQWRRQELAQLYCEKSN--MKECFKKIFYEDEPFGHHKSKLLELLIDDRSKSLAARLY 685
P+P R+QE + ++++ ++ F+K E GHH K + K A
Sbjct: 58 PLPDERQQEPEEPVSQRASRVAEQLFRKFLKFAENVGHHSEKAFKKAKVVAEKGFTAAKT 117
Query: 686 HTM 688
HT+
Sbjct: 118 HTV 120
>M.Javanica_Scaff1040g012246 on XP_001349034 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 26.9 bits (58), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 96 REETALLYCKNELEEENEQNSSSCLEKIFNEFNQDPLEELLKDNI 140
++ L KNE E N QN ++K +N+F + +LKD+I
Sbjct: 638 KDAGGLCILKNERSETNSQNHPYDIQKTYNDFFNFWVAHVLKDSI 682
>M.Javanica_Scaff1040g012246 on XP_805202 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 107
Score = 24.6 bits (52), Expect = 8.2, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 4/55 (7%)
Query: 421 IVEGNGD----DGFVNENEDDVISEEDDRDVGKTSEQGNDSIASYGSEYDDLSSN 471
+V G+G+ DG E + S ED G T QG + I S E + N
Sbjct: 13 VVTGSGETVEGDGSPQTPEVSMSSGEDGETTGGTDAQGEEGIHSQAGEVKSAALN 67
>M.Javanica_Scaff1040g012246 on XP_813726 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 924
Score = 25.8 bits (55), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 16/71 (22%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 561 KEWCEDIKQVMESKSRFTCSRYHPINDSTDPFASSNKNSLSLLIILEYIQSLSEYKLRWE 620
K CE+++ +E K S ++ I S S+++ +L Y + L+ ++ W
Sbjct: 668 KSVCENVQCQLEGKEDKKISHFY-IGGDGGSTGSQEDVSVTVTNVLLYNRPLTSEEIAWL 726
Query: 621 LLNKLFLPIPQ 631
N + +P P+
Sbjct: 727 AKNTITIPKPE 737
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff103g001953
(218 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAU87405 ROP4 (Establishment) [Toxoplasma gondii] 26 2.2
CAJ20842 ROP7 (Establishment) [Toxoplasma gondii] 25 3.3
XP_001351321 PfEMP1 (Establishment) [Plasmodium falciparum] 24 8.7
>M.Javanica_Scaff103g001953 on AAU87405 ROP4 (Establishment) [Toxoplasma gondii]
Length = 255
Score = 25.8 bits (55), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Query: 196 STLAGNKCKEGEVEGLR-GYWLE 217
ST N EGE EG R G WLE
Sbjct: 63 STEGENTVSEGEAEGSRGGSWLE 85
>M.Javanica_Scaff103g001953 on CAJ20842 ROP7 (Establishment) [Toxoplasma gondii]
Length = 255
Score = 25.0 bits (53), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Query: 196 STLAGNKCKEGEVEGLR-GYWLE 217
ST N EGE EG R G WLE
Sbjct: 63 STEGENTVSEGEAEGSRGGSWLE 85
>M.Javanica_Scaff103g001953 on XP_001351321 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3467
Score = 24.3 bits (51), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 16/125 (12%)
Query: 72 KKDGLIVSIDEYVNKTLLNPKRIIFDKIKEKKYFSEGKQEEYELDKNTFLKLTNPNFLFR 131
+KD I+ YVNKT ++ K K+++ E K+ +Y KN FL+L N R
Sbjct: 388 QKDKYDKEIETYVNKTPISNSNSNTKKEYYKEFYEELKK-QYGSVKN-FLQLLNNG---R 442
Query: 132 QCCEDRKLPDVCLRKCHFNTYTKETLQQMYFKRD---PCPIAAAT-DIQYCAAQGRDHIR 187
C E + D +TK + +++ D PCP D + C + D
Sbjct: 443 YCQEKIEEEDAI-------DFTKTGNKHAFYRSDYCQPCPDCVVECDGKTCTQKTDDDKN 495
Query: 188 CCAKV 192
C +K+
Sbjct: 496 CRSKI 500
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff105g001983
(208 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609041 variant erythrocyte surface antigen-1, alpha subun... 28 0.56
XP_001610714 variant erythrocyte surface antigen-1, alpha subun... 25 5.2
>M.Javanica_Scaff105g001983 on XP_001609041 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1318
Score = 27.7 bits (60), Expect = 0.56, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Query: 100 SNKREELVELSKKFVMVNVEDDDEPEEEEYAPDGRYIPRLFILNKEGHPLTVDNAKNYPN 159
S +E++E SK + V ++ +E P +F +K HP+TVD + +
Sbjct: 485 SQAYKEMLEYSKGRLTVVLKTPNEATSTNEQPQ-----LMFYQDKRPHPITVDEYNLFAH 539
Query: 160 NKQYFPQVPDVINAMKFGLKKFEGSEE 186
+ P V+ ++ GLK + + E
Sbjct: 540 FQAVTQYCPLVLIGIQGGLKSTDKTLE 566
>M.Javanica_Scaff105g001983 on XP_001610714 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1231
Score = 24.6 bits (52), Expect = 5.2, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 17/96 (17%)
Query: 91 QALKKSFASSNKREELVELSKKFVMVNVEDDDEPEEEEYAPDGRYIPRLFILNKEGHPLT 150
QA K + + KR E E+ KK D+ + E+++ F +K HP+T
Sbjct: 412 QAYKDTLHYAKKRLE--EVLKK------PDECDTEQQQLK---------FYQDKRPHPIT 454
Query: 151 VDNAKNYPNNKQYFPQVPDVINAMKFGLKKFEGSEE 186
VD + + + P V+ ++ GLK + S E
Sbjct: 455 VDVFNLFAHFQAVTQYCPLVLIGIQGGLKGTDSSTE 490
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10547g059145
(56 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001611900 variant erythrocyte surface antigen-1, alpha subun... 25 0.28
XP_001611901 variant erythrocyte surface antigen-1, alpha subun... 25 0.32
XP_818859 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 0.45
XP_814219 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 0.48
XP_803151 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 1.9
XP_812069 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 2.4
XP_814486 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 2.4
XP_818399 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 2.8
XP_809010 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.5
XP_811362 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.6
XP_001351319 PfEMP1 (Establishment) [Plasmodium falciparum] 21 5.0
XP_001351517 PfEMP1 (Establishment) [Plasmodium falciparum] 20 9.6
>M.Javanica_Scaff10547g059145 on XP_001611900 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1226
Score = 24.6 bits (52), Expect = 0.28, Method: Composition-based stats.
Identities = 10/16 (62%), Positives = 11/16 (68%)
Query: 23 KKDEGKEVVDDKAGDK 38
KKDEG +DDK G K
Sbjct: 1205 KKDEGDYSIDDKGGKK 1220
>M.Javanica_Scaff10547g059145 on XP_001611901 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1211
Score = 24.6 bits (52), Expect = 0.32, Method: Composition-based stats.
Identities = 10/16 (62%), Positives = 11/16 (68%)
Query: 23 KKDEGKEVVDDKAGDK 38
KKDEG +DDK G K
Sbjct: 1190 KKDEGDYSIDDKGGKK 1205
>M.Javanica_Scaff10547g059145 on XP_818859 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 867
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 4 FISFLLIVVFVYIQLCDCGKKDEG 27
F S +L++ V++ CDCG G
Sbjct: 44 FTSTVLLLFLVWMICCDCGAAAAG 67
>M.Javanica_Scaff10547g059145 on XP_814219 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 958
Score = 24.3 bits (51), Expect = 0.48, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 33 DKAGDKKGMKKSFRRQQGWI 52
D G+KK M+ S+ R++ WI
Sbjct: 613 DGEGEKKLMELSYDREKKWI 632
>M.Javanica_Scaff10547g059145 on XP_803151 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 755
Score = 22.3 bits (46), Expect = 1.9, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 17 QLCDCGKKDEGKEVVDDKAGDKKGMKKSFRRQQG 50
Q D G +G+ V+ + G G K+ Q G
Sbjct: 676 QTVDGGSFSDGEPTVETREGGTDGQKEGIHAQNG 709
>M.Javanica_Scaff10547g059145 on XP_812069 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 948
Score = 22.3 bits (46), Expect = 2.4, Method: Composition-based stats.
Identities = 8/12 (66%), Positives = 10/12 (83%)
Query: 27 GKEVVDDKAGDK 38
GKEV D+K GD+
Sbjct: 827 GKEVADNKQGDQ 838
>M.Javanica_Scaff10547g059145 on XP_814486 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 948
Score = 22.3 bits (46), Expect = 2.4, Method: Composition-based stats.
Identities = 8/12 (66%), Positives = 10/12 (83%)
Query: 27 GKEVVDDKAGDK 38
GKEV D+K GD+
Sbjct: 827 GKEVADNKQGDQ 838
>M.Javanica_Scaff10547g059145 on XP_818399 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 953
Score = 21.9 bits (45), Expect = 2.8, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 20 DCGKKDEGKEVVDDKAGDK 38
D EG + VD +AGDK
Sbjct: 831 DVDSSSEGVQTVDAEAGDK 849
>M.Javanica_Scaff10547g059145 on XP_809010 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 774
Score = 21.6 bits (44), Expect = 4.5, Method: Composition-based stats.
Identities = 7/35 (20%), Positives = 18/35 (51%)
Query: 1 MSKFISFLLIVVFVYIQLCDCGKKDEGKEVVDDKA 35
MS+ + +++ + + +CD G+ + E D+
Sbjct: 39 MSRRVFTSAVLLLLVVMMCDTGRAAQADEPTSDQG 73
>M.Javanica_Scaff10547g059145 on XP_811362 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 524
Score = 21.6 bits (44), Expect = 4.6, Method: Composition-based stats.
Identities = 7/35 (20%), Positives = 18/35 (51%)
Query: 1 MSKFISFLLIVVFVYIQLCDCGKKDEGKEVVDDKA 35
MS+ + +++ + + +CD G+ + E D+
Sbjct: 39 MSRHLFCSAVLLLLVVMMCDTGRAAQADEPTSDQG 73
>M.Javanica_Scaff10547g059145 on XP_001351319 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2646
Score = 21.2 bits (43), Expect = 5.0, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 17 QLCDCGKKDEGKEVVDDKAGD 37
Q+ DC +K+ GK D K GD
Sbjct: 874 QVGDCHEKNYGKNGPDWKCGD 894
>M.Javanica_Scaff10547g059145 on XP_001351517 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2193
Score = 20.4 bits (41), Expect = 9.6, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
Query: 13 FVYIQLCD----CGKKDEGKEVVDDKAGDKKGMKK 43
F + Q C+ CG K G E + G KG K+
Sbjct: 481 FYHSQYCEVCPGCGVKHNGSEWKEKNNGQCKGGKR 515
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1057g012399
(68 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAA53688 gp63 (Invasion) [Leishmania donovani] 26 0.17
AAA29236 gp63 (Invasion) [Leishmania donovani] 26 0.17
AAA29238 gp63 (Invasion) [Leishmania donovani] 26 0.17
>M.Javanica_Scaff1057g012399 on AAA53688 gp63 (Invasion) [Leishmania donovani]
Length = 255
Score = 25.8 bits (55), Expect = 0.17, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 30 WYRLRLKKKHISLLNPNQHCSPVEKYIKR 58
W LR+ L +P HC+ V ++IKR
Sbjct: 103 WGALRIAVSTEDLTDPAYHCARVGQHIKR 131
>M.Javanica_Scaff1057g012399 on AAA29236 gp63 (Invasion) [Leishmania donovani]
Length = 255
Score = 25.8 bits (55), Expect = 0.17, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 30 WYRLRLKKKHISLLNPNQHCSPVEKYIKR 58
W LR+ L +P HC+ V ++IKR
Sbjct: 103 WGALRIAVSTEDLTDPAYHCARVGQHIKR 131
>M.Javanica_Scaff1057g012399 on AAA29238 gp63 (Invasion) [Leishmania donovani]
Length = 255
Score = 25.8 bits (55), Expect = 0.17, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 30 WYRLRLKKKHISLLNPNQHCSPVEKYIKR 58
W LR+ L +P HC+ V ++IKR
Sbjct: 103 WGALRIAVSTEDLTDPAYHCARVGQHIKR 131
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10330g058442
(57 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1031g012174
(75 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001608665 variant erythrocyte surface antigen-1, alpha subun... 25 0.38
XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum] 23 2.6
>M.Javanica_Scaff1031g012174 on XP_001608665 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1326
Score = 25.4 bits (54), Expect = 0.38, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 9 CLICILLIETAYCALPPKYLG--LCNWQACVGEKEEGMHTS 47
C+ ++ + A A P+ LG ++ VGEKE+GM+ S
Sbjct: 985 CVYTLVRVTAALSATTPQVLGDVFGFFRGGVGEKEKGMNKS 1025
>M.Javanica_Scaff1031g012174 on XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2994
Score = 23.1 bits (48), Expect = 2.6, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 18 TAYCALPPKYLGLCNWQAC 36
+ +C P Y CNW+ C
Sbjct: 467 SKFCGACPFYGVKCNWKTC 485
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10413g058701
(325 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_807140 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.3
XP_001350413 PfEMP1 (Establishment) [Plasmodium falciparum] 25 8.9
>M.Javanica_Scaff10413g058701 on XP_807140 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 393
Score = 25.4 bits (54), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 36 QGNANYFEGGSSSSLALTLVSPTNFSCQWDG 66
+G A+Y GGS+SS+A +L + T + DG
Sbjct: 203 EGKADYRSGGSTSSVAASLSTET-VAAPVDG 232
>M.Javanica_Scaff10413g058701 on XP_001350413 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2860
Score = 24.6 bits (52), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 194 DNCRESHNYLNALKDHVRKEHKQYGTDFWASIVKYKKDNKLEG 236
D C+ +L KD +K+ K++ TD +YK D L+G
Sbjct: 1515 DACKVYEEWLQGWKDQYKKQSKKFTTD--KEKKEYKDDPDLDG 1555
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10619g059351
(172 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351435 PfEMP1 (Establishment) [Plasmodium falciparum] 29 0.15
XP_001350595 PfEMP1 (Establishment) [Plasmodium falciparum] 28 0.38
XP_804330 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.52
>M.Javanica_Scaff10619g059351 on XP_001351435 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2209
Score = 28.9 bits (63), Expect = 0.15, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 62 IGNGLLPQQQPFNLPSFPTHPNPFINNFYQPPPFN 96
+GN + P +FP++PNP NN Y P N
Sbjct: 2152 VGNNIYVDNNPNQ--TFPSNPNPVENNTYVNAPTN 2184
>M.Javanica_Scaff10619g059351 on XP_001350595 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2256
Score = 27.7 bits (60), Expect = 0.38, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Query: 60 DLIGNGLLPQQQPFNLPSFPTHPNPFINNFY 90
+L+GN + P Q NL +FP++PNP +N Y
Sbjct: 2201 NLVGN-INPVDQNSNL-TFPSNPNPAYDNIY 2229
>M.Javanica_Scaff10619g059351 on XP_804330 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 910
Score = 27.3 bits (59), Expect = 0.52, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 128 TTPQYPLYQPQFPLGGPQLQLGGPQLPLGGLPGGLPNQLNPA 169
T P P P P Q L G +P GG P P +LN A
Sbjct: 723 TQPTVPSPTPAGPQPTEQATLNGSSVPSGGAP-STPEELNAA 763
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1031g012171
(532 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_817877 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 8.3
>M.Javanica_Scaff1031g012171 on XP_817877 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 900
Score = 25.8 bits (55), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 56/139 (40%), Gaps = 20/139 (14%)
Query: 36 IIPKAIINEFPQEKNRIPLRDPFRNVHWRAKDGENVNNRGPFYGQPEQ-VHLSYGGDPSR 94
++ I++ P + IPL + + D EN G Y ++ + L YGG+
Sbjct: 582 LVATVSIDKVPTREGPIPL------MGVKMSDAENPVRLGLSYNNKKKWLLLCYGGENKE 635
Query: 95 IFITWLTFDDTIESIVEYWVDSIQNSKRVEAKMDYFDDGGINKVRRYTHRALLEGIHPGI 154
+ ITW +IV +QN K+ A +D GG + + + + I
Sbjct: 636 LSITWQPGKKHQLAIV------LQNGKQGSAYVDGKRVGGDEQCKLENTESKV------I 683
Query: 155 RYFYRVGSQYGWSSIFSFV 173
+FY +G G + I V
Sbjct: 684 SHFY-IGGDGGSAEIQEGV 701
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10578g059236
(102 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_816570 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.12
XP_812950 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.24
XP_803927 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.28
XP_805911 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.28
XP_807166 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.29
XP_818308 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.30
XP_817001 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.30
XP_817003 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.30
XP_810696 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.30
XP_810496 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.30
XP_806731 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.72
XP_817149 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.75
XP_812794 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.3
XP_816556 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.2
XP_817816 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.2
XP_821425 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.5
XP_807358 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.7
XP_810383 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.9
XP_808678 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.9
XP_802609 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.9
XP_806412 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.9
XP_809846 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.9
XP_808800 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.9
XP_809580 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.9
XP_817996 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.9
XP_813143 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.9
XP_807450 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.9
XP_815498 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.9
XP_817993 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.9
XP_809198 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.9
XP_808611 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.9
XP_818708 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.0
XP_820389 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.0
XP_816725 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.0
XP_816720 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.0
XP_807802 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.0
XP_804542 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.0
XP_820393 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.0
XP_821677 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.0
XP_808176 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.0
XP_822014 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.0
XP_804820 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.0
XP_822017 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.0
XP_803103 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.0
XP_822022 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.1
XP_804569 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.1
XP_816823 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.1
XP_809181 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.1
XP_805179 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.1
XP_821693 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.1
XP_821991 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.1
XP_805061 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.1
XP_806989 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.1
XP_812550 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.1
XP_808213 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.1
XP_808840 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.1
XP_809179 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.1
XP_815148 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.1
XP_813500 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.1
XP_821388 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.1
XP_808836 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.6
XP_802520 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.7
XP_818196 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.8
XP_806966 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.2
XP_804821 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.2
XP_818480 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 7.5
>M.Javanica_Scaff10578g059236 on XP_816570 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 718
Score = 27.7 bits (60), Expect = 0.12, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 73 GAGKGRILASWPSEIFKIFACGDGKRRF 100
G+ G ++A W +I I C DG++ F
Sbjct: 313 GSCFGPLIAEWEEKILMIIECADGRKVF 340
>M.Javanica_Scaff10578g059236 on XP_812950 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 815
Score = 26.9 bits (58), Expect = 0.24, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 58 NSGLGSSKILKIFTCGAGKGRILASWPSEIFKIFACGDGKRR 99
+S S K+ K + + W ++ + ACGDG+RR
Sbjct: 290 SSATESGKLSKGMSADGCSDPSVVEWKDKLMMMTACGDGRRR 331
>M.Javanica_Scaff10578g059236 on XP_803927 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 412
Score = 26.6 bits (57), Expect = 0.28, Method: Composition-based stats.
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 80 LASWPSEIFKIFACGDGKRR 99
+ W ++ + ACGDG+RR
Sbjct: 314 VVEWKDKLMMMTACGDGRRR 333
>M.Javanica_Scaff10578g059236 on XP_805911 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 522
Score = 26.6 bits (57), Expect = 0.28, Method: Composition-based stats.
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 80 LASWPSEIFKIFACGDGKRR 99
+ W ++ + ACGDG+RR
Sbjct: 312 VVEWKDKLMMMTACGDGRRR 331
>M.Javanica_Scaff10578g059236 on XP_807166 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 801
Score = 26.6 bits (57), Expect = 0.29, Method: Composition-based stats.
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 80 LASWPSEIFKIFACGDGKRR 99
+ W ++ + ACGDG+RR
Sbjct: 311 VVEWKDKLMMMTACGDGRRR 330
>M.Javanica_Scaff10578g059236 on XP_818308 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 925
Score = 26.6 bits (57), Expect = 0.30, Method: Composition-based stats.
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 80 LASWPSEIFKIFACGDGKRR 99
+ W ++ + ACGDG+RR
Sbjct: 304 VVEWKDKLMMMTACGDGRRR 323
>M.Javanica_Scaff10578g059236 on XP_817001 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 928
Score = 26.6 bits (57), Expect = 0.30, Method: Composition-based stats.
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 80 LASWPSEIFKIFACGDGKRR 99
+ W ++ + ACGDG+RR
Sbjct: 300 VVEWKDKLMMMTACGDGRRR 319
>M.Javanica_Scaff10578g059236 on XP_817003 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 931
Score = 26.6 bits (57), Expect = 0.30, Method: Composition-based stats.
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 80 LASWPSEIFKIFACGDGKRR 99
+ W ++ + ACGDG+RR
Sbjct: 301 VVEWKDKLMMMTACGDGRRR 320
>M.Javanica_Scaff10578g059236 on XP_810696 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 937
Score = 26.6 bits (57), Expect = 0.30, Method: Composition-based stats.
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 80 LASWPSEIFKIFACGDGKRR 99
+ W ++ + ACGDG+RR
Sbjct: 302 VVEWKDKLMMMTACGDGRRR 321
>M.Javanica_Scaff10578g059236 on XP_810496 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 943
Score = 26.6 bits (57), Expect = 0.30, Method: Composition-based stats.
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 80 LASWPSEIFKIFACGDGKRR 99
+ W ++ + ACGDG+RR
Sbjct: 307 VVEWKDKLMMMTACGDGRRR 326
>M.Javanica_Scaff10578g059236 on XP_806731 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 479
Score = 25.4 bits (54), Expect = 0.72, Method: Composition-based stats.
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 80 LASWPSEIFKIFACGDGKRR 99
+A W ++ + AC DG+RR
Sbjct: 280 VAEWKGKLMMMTACDDGRRR 299
>M.Javanica_Scaff10578g059236 on XP_817149 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 779
Score = 25.4 bits (54), Expect = 0.75, Method: Composition-based stats.
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 80 LASWPSEIFKIFACGDGKRR 99
+A W ++ + AC DG+RR
Sbjct: 302 VAEWKGKLMMMTACDDGRRR 321
>M.Javanica_Scaff10578g059236 on XP_812794 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 936
Score = 24.6 bits (52), Expect = 1.3, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 23/95 (24%)
Query: 5 FLFPYFISKIEEIWPHTLLKFSKFSPEAQEKGEFRLLGLQNSQNFRLRRLKRKNSGLGSS 64
FLFP K +E + +A E G+ L + +SQ+F +L + G+ +
Sbjct: 314 FLFPVEAVKKKE------------NDDADEDGKTVSLIISSSQDFTNWKLSK---GMSAD 358
Query: 65 KILKIFTCGAGKGRILASWPSEIFKIFACGDGKRR 99
G G ++ +++ + AC DG+RR
Sbjct: 359 --------GCGDPSVVEWKDAKLMMMTACADGRRR 385
>M.Javanica_Scaff10578g059236 on XP_816556 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 807
Score = 23.9 bits (50), Expect = 2.2, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 80 LASWPSEIFKIFACGDGKRR 99
+ W +++ + AC DG+RR
Sbjct: 320 VVEWKNKLMMMTACDDGRRR 339
>M.Javanica_Scaff10578g059236 on XP_817816 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 912
Score = 23.9 bits (50), Expect = 2.2, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 58 NSGLGSSKILKIFTCGAGKGRILASWPSEIFKIFACGDGKRR 99
+SG K+ K + G + W ++ + AC DG+RR
Sbjct: 292 SSGNEGWKLSKGISDGGCSDPSVVEWKDKLMMMTACDDGRRR 333
>M.Javanica_Scaff10578g059236 on XP_821425 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 787
Score = 23.9 bits (50), Expect = 2.5, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 57 KNSGLGSSKILKIFTCGAGKGRILASWPSEIFKIFACGDG 96
+N GS+ + CG+ + + A+ P EI + GDG
Sbjct: 645 QNGKQGSAYVDGQRVCGSAQRGLEATEPQEISHFYIGGDG 684
Score = 23.5 bits (49), Expect = 3.0, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 80 LASWPSEIFKIFACGDGKRR 99
+ W ++ + AC DG+RR
Sbjct: 312 VVEWKGKLMMMTACDDGRRR 331
>M.Javanica_Scaff10578g059236 on XP_807358 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 872
Score = 23.9 bits (50), Expect = 2.7, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 80 LASWPSEIFKIFACGDGKRR 99
+ W ++ + AC DG+RR
Sbjct: 388 VVGWKDKLLMMTACDDGRRR 407
>M.Javanica_Scaff10578g059236 on XP_810383 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 928
Score = 23.9 bits (50), Expect = 2.9, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 80 LASWPSEIFKIFACGDGKRR 99
+ W ++ + AC DG+RR
Sbjct: 304 VVEWKEKLMMMTACDDGRRR 323
>M.Javanica_Scaff10578g059236 on XP_808678 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 544
Score = 23.5 bits (49), Expect = 2.9, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 80 LASWPSEIFKIFACGDGKRR 99
+ W ++ + AC DG+RR
Sbjct: 81 VVEWKGKLMMMTACDDGRRR 100
>M.Javanica_Scaff10578g059236 on XP_802609 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 699
Score = 23.5 bits (49), Expect = 2.9, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 80 LASWPSEIFKIFACGDGKRR 99
+ W ++ + AC DG+RR
Sbjct: 142 VVEWKDKLMMMTACDDGRRR 161
>M.Javanica_Scaff10578g059236 on XP_806412 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 619
Score = 23.5 bits (49), Expect = 2.9, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 80 LASWPSEIFKIFACGDGKRR 99
+ W ++ + AC DG+RR
Sbjct: 93 VVEWKGKLMMMTACDDGRRR 112
>M.Javanica_Scaff10578g059236 on XP_809846 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 764
Score = 23.5 bits (49), Expect = 2.9, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 80 LASWPSEIFKIFACGDGKRR 99
+ W ++ + AC DG+RR
Sbjct: 301 VVEWKDKLMMMTACDDGRRR 320
>M.Javanica_Scaff10578g059236 on XP_808800 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 776
Score = 23.5 bits (49), Expect = 2.9, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 80 LASWPSEIFKIFACGDGKRR 99
+ W ++ + AC DG+RR
Sbjct: 315 VVEWKDKLMMMTACDDGRRR 334
>M.Javanica_Scaff10578g059236 on XP_809580 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 776
Score = 23.5 bits (49), Expect = 2.9, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 80 LASWPSEIFKIFACGDGKRR 99
+ W ++ + AC DG+RR
Sbjct: 319 VVEWKDKLMMMTACDDGRRR 338
>M.Javanica_Scaff10578g059236 on XP_817996 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 792
Score = 23.5 bits (49), Expect = 2.9, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 80 LASWPSEIFKIFACGDGKRR 99
+ W ++ + AC DG+RR
Sbjct: 273 VVEWKDKLMMMTACDDGRRR 292
>M.Javanica_Scaff10578g059236 on XP_813143 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 795
Score = 23.5 bits (49), Expect = 2.9, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 80 LASWPSEIFKIFACGDGKRR 99
+ W ++ + AC DG+RR
Sbjct: 313 VVEWKDKLMMMTACDDGRRR 332
>M.Javanica_Scaff10578g059236 on XP_807450 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 810
Score = 23.5 bits (49), Expect = 2.9, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 80 LASWPSEIFKIFACGDGKRR 99
+ W ++ + AC DG+RR
Sbjct: 316 VVEWKDKLMMMTACDDGRRR 335
>M.Javanica_Scaff10578g059236 on XP_815498 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 822
Score = 23.5 bits (49), Expect = 2.9, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 80 LASWPSEIFKIFACGDGKRR 99
+ W ++ + AC DG+RR
Sbjct: 312 VVEWKDKLMMMTACDDGRRR 331
>M.Javanica_Scaff10578g059236 on XP_817993 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 830
Score = 23.5 bits (49), Expect = 2.9, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 80 LASWPSEIFKIFACGDGKRR 99
+ W ++ + AC DG+RR
Sbjct: 312 VVEWKDKLMMMTACDDGRRR 331
>M.Javanica_Scaff10578g059236 on XP_809198 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 832
Score = 23.5 bits (49), Expect = 2.9, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 80 LASWPSEIFKIFACGDGKRR 99
+ W ++ + AC DG+RR
Sbjct: 312 VVEWKDKLMMMTACDDGRRR 331
>M.Javanica_Scaff10578g059236 on XP_808611 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 848
Score = 23.5 bits (49), Expect = 2.9, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 80 LASWPSEIFKIFACGDGKRR 99
+ W ++ + AC DG+RR
Sbjct: 317 VVEWKDKLMMMTACDDGRRR 336
>M.Javanica_Scaff10578g059236 on XP_818708 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 929
Score = 23.5 bits (49), Expect = 3.0, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 80 LASWPSEIFKIFACGDGKRR 99
+ W ++ + AC DG+RR
Sbjct: 303 VVEWKDKLMMMTACDDGRRR 322
>M.Javanica_Scaff10578g059236 on XP_820389 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 774
Score = 23.5 bits (49), Expect = 3.0, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 80 LASWPSEIFKIFACGDGKRR 99
+ W ++ + AC DG+RR
Sbjct: 312 VVEWKGKLMMMTACDDGRRR 331
>M.Javanica_Scaff10578g059236 on XP_816725 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 775
Score = 23.5 bits (49), Expect = 3.0, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 80 LASWPSEIFKIFACGDGKRR 99
+ W ++ + AC DG+RR
Sbjct: 314 VVEWKGKLMMMTACDDGRRR 333
>M.Javanica_Scaff10578g059236 on XP_816720 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 782
Score = 23.5 bits (49), Expect = 3.0, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 80 LASWPSEIFKIFACGDGKRR 99
+ W ++ + AC DG+RR
Sbjct: 319 VVEWKGKLMMMTACDDGRRR 338
>M.Javanica_Scaff10578g059236 on XP_807802 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 805
Score = 23.5 bits (49), Expect = 3.0, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 80 LASWPSEIFKIFACGDGKRR 99
+ W ++ + AC DG+RR
Sbjct: 295 VVEWKGKLMMMTACDDGRRR 314
>M.Javanica_Scaff10578g059236 on XP_804542 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 813
Score = 23.5 bits (49), Expect = 3.0, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 80 LASWPSEIFKIFACGDGKRR 99
+ W ++ + AC DG+RR
Sbjct: 322 VVEWKGKLMMMTACDDGRRR 341
>M.Javanica_Scaff10578g059236 on XP_820393 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 836
Score = 23.5 bits (49), Expect = 3.0, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 80 LASWPSEIFKIFACGDGKRR 99
+ W ++ + AC DG+RR
Sbjct: 374 VVEWKGKLMMMTACDDGRRR 393
>M.Javanica_Scaff10578g059236 on XP_821677 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 861
Score = 23.5 bits (49), Expect = 3.0, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 80 LASWPSEIFKIFACGDGKRR 99
+ W ++ + AC DG+RR
Sbjct: 298 VVEWKGKLMMMTACDDGRRR 317
>M.Javanica_Scaff10578g059236 on XP_808176 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 889
Score = 23.5 bits (49), Expect = 3.0, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 80 LASWPSEIFKIFACGDGKRR 99
+ W ++ + AC DG+RR
Sbjct: 298 VVEWKGKLMMMTACDDGRRR 317
>M.Javanica_Scaff10578g059236 on XP_822014 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 950
Score = 23.5 bits (49), Expect = 3.0, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 80 LASWPSEIFKIFACGDGKRR 99
+ W ++ + AC DG+RR
Sbjct: 370 VVEWKGKLMMMTACDDGRRR 389
>M.Javanica_Scaff10578g059236 on XP_804820 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 954
Score = 23.5 bits (49), Expect = 3.0, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 80 LASWPSEIFKIFACGDGKRR 99
+ W ++ + AC DG+RR
Sbjct: 322 VVEWKGKLMMMTACDDGRRR 341
>M.Javanica_Scaff10578g059236 on XP_822017 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 990
Score = 23.5 bits (49), Expect = 3.0, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 80 LASWPSEIFKIFACGDGKRR 99
+ W ++ + AC DG+RR
Sbjct: 405 VVEWKGKLMMMTACDDGRRR 424
>M.Javanica_Scaff10578g059236 on XP_803103 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 531
Score = 23.5 bits (49), Expect = 3.0, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 80 LASWPSEIFKIFACGDGKRR 99
+ W ++ + AC DG+RR
Sbjct: 256 VVEWKDKLIMMTACDDGRRR 275
>M.Javanica_Scaff10578g059236 on XP_822022 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 791
Score = 23.5 bits (49), Expect = 3.1, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 80 LASWPSEIFKIFACGDGKRR 99
+ W ++ + AC DG+RR
Sbjct: 309 VVEWKGKLMMMAACDDGRRR 328
>M.Javanica_Scaff10578g059236 on XP_804569 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 689
Score = 23.5 bits (49), Expect = 3.1, Method: Composition-based stats.
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 83 WPSEIFKIFACGDGKRR 99
W EI + +C DG RR
Sbjct: 17 WNDEIIMMTSCDDGSRR 33
>M.Javanica_Scaff10578g059236 on XP_816823 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 772
Score = 23.5 bits (49), Expect = 3.1, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 80 LASWPSEIFKIFACGDGKRR 99
+ W ++ + AC DG+RR
Sbjct: 311 VVEWEGKLMMMTACDDGRRR 330
>M.Javanica_Scaff10578g059236 on XP_809181 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 665
Score = 23.5 bits (49), Expect = 3.1, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 80 LASWPSEIFKIFACGDGKRR 99
+ W ++ + AC DG+RR
Sbjct: 131 VVEWKDKLIMMTACDDGRRR 150
>M.Javanica_Scaff10578g059236 on XP_805179 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 793
Score = 23.5 bits (49), Expect = 3.1, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 80 LASWPSEIFKIFACGDGKRR 99
+ W ++ + AC DG+RR
Sbjct: 316 VVEWKGKLMMMTACDDGRRR 335
>M.Javanica_Scaff10578g059236 on XP_821693 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 834
Score = 23.5 bits (49), Expect = 3.1, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 80 LASWPSEIFKIFACGDGKRR 99
+ W ++ + AC DG+RR
Sbjct: 323 VVEWEGKLMMMTACDDGRRR 342
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10370g058570
(178 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10466g058874
(102 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_802177 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.8
XP_803895 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.0
XP_806226 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.5
XP_813568 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.9
XP_804826 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 6.0
>M.Javanica_Scaff10466g058874 on XP_802177 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 210
Score = 23.9 bits (50), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 3 FYLWADEISSTSEFPIPSVAVPVDPLHNSELVPLKDSLARNAE 45
FY+ +DE S S+ + +V + PL EL ++ S A+ +
Sbjct: 140 FYIGSDEGGSGSDVTVTNVFLYDRPLSFGELKLVRKSDAKKGK 182
>M.Javanica_Scaff10466g058874 on XP_803895 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 746
Score = 24.3 bits (51), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Query: 3 FYLWADEISSTSEFPIPSVAVPVDPLHNSELVPLKDS---LARNAEHLAGSGVPRKKI 57
FY DE S S + +V + PL+ +E+ +K L R E G R+ I
Sbjct: 658 FYFGGDEGDSDSNVTVTNVFLYNHPLNPTEMRAIKGRAPVLTRGPETQVEDGTERRHI 715
>M.Javanica_Scaff10466g058874 on XP_806226 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 728
Score = 23.9 bits (50), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 3 FYLWADEISSTSEFPIPSVAVPVDPLHNSELVPLKDSLAR--NAEHLAGSGVPR 54
FY DE S S + +V + PL + EL +K S + N + GV R
Sbjct: 658 FYFGGDEGDSDSSVTVTNVFLYNRPLSDDELKMVKKSDGKKGNGDDSMRGGVSR 711
>M.Javanica_Scaff10466g058874 on XP_813568 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 769
Score = 23.5 bits (49), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 3 FYLWADEISSTSEFPIPSVAVPVDPLHNSELVPLK 37
FY DE S S + +V + PL+++E+ LK
Sbjct: 658 FYFGGDEGDSDSNVTVTNVFLYNRPLNSTEIRALK 692
>M.Javanica_Scaff10466g058874 on XP_804826 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 720
Score = 22.7 bits (47), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 5/65 (7%)
Query: 1 MSFYLWADEISSTSEFPIPSVAVPVDPLHNSELVPLKDSLARNAEHLAGSGVPRKKIVIG 60
+ FY DE S S + +V + PL + EL L + +E GV R +
Sbjct: 656 LYFYFGGDEGDSDSNATVTNVFLYNRPLSDGEL-----KLVKKSEDSVRGGVSRVLPLFL 710
Query: 61 LSTWA 65
L W
Sbjct: 711 LGLWG 715
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1046g012290
(265 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10464g058868
(259 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10463g058865
(118 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_818480 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.8
XP_001351319 PfEMP1 (Establishment) [Plasmodium falciparum] 24 2.9
XP_811897 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.1
ABW16954 ROM1 (Invasion) [Plasmodium falciparum] 23 6.1
XP_001351438 PfEMP1 (Establishment) [Plasmodium falciparum] 23 6.4
XP_816813 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 9.4
>M.Javanica_Scaff10463g058865 on XP_818480 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 926
Score = 24.6 bits (52), Expect = 1.8, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 22/57 (38%), Gaps = 16/57 (28%)
Query: 36 GTGGRAASPSATTC----------------SIYFGGSKFFRICSNSSNSFRPHSVGG 76
G GG ASPSA + IY GGSK + S+S R S G
Sbjct: 759 GAGGGRASPSAPSTVTTSLGKEQSVIQLPSGIYSGGSKHVDVASSSDGDPRVGSEAG 815
>M.Javanica_Scaff10463g058865 on XP_001351319 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2646
Score = 24.3 bits (51), Expect = 2.9, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 5/30 (16%)
Query: 19 LTKFKGFQFPGICKGITGTGGRAASPSATT 48
+ K+K F C G G G ++A+P+AT+
Sbjct: 565 VQKYKKF-----CNGNGGNGEKSATPNATS 589
>M.Javanica_Scaff10463g058865 on XP_811897 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 879
Score = 23.5 bits (49), Expect = 4.1, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 85 GSGGAAGFSNISRRSPYSRRSVLRSNFEATRTLG 118
GSG AAG + S S + R + S E +LG
Sbjct: 58 GSGEAAGVAEPSSVSTFEWRGINESGGETVDSLG 91
>M.Javanica_Scaff10463g058865 on ABW16954 ROM1 (Invasion) [Plasmodium falciparum]
Length = 278
Score = 23.1 bits (48), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 20/48 (41%)
Query: 9 LFFYLFICICLTKFKGFQFPGICKGITGTGGRAASPSATTCSIYFGGS 56
+FF L + L K G I +TG G S S T C I G S
Sbjct: 122 IFFQLRMGFTLEKNYGIMKIIILYFVTGMYGNILSSSITYCPIKVGAS 169
>M.Javanica_Scaff10463g058865 on XP_001351438 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2312
Score = 23.1 bits (48), Expect = 6.4, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 14/36 (38%)
Query: 37 TGGRAASPSATTCSIYFGGSKFFRICSNSSNSFRPH 72
T RA A TC G + F CSN + H
Sbjct: 254 TANRATVWKAITCKADTGNAYFRPTCSNRQGPSQAH 289
>M.Javanica_Scaff10463g058865 on XP_816813 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 420
Score = 22.3 bits (46), Expect = 9.4, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 33 GITGTGGRAASPSATTCSIYFGGSKFFRICSNSS 66
G +G GG ASP +T S G ++ S +S
Sbjct: 252 GKSGAGGVPASPLSTVTSSSAGKEPVKQLASGTS 285
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10385g058621
(300 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_808394 Trans-sialidase (Invasion) [Trypanosoma cruzi] 34 0.010
XP_806519 Trans-sialidase (Invasion) [Trypanosoma cruzi] 32 0.032
XP_812313 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 5.6
>M.Javanica_Scaff10385g058621 on XP_808394 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 912
Score = 33.9 bits (76), Expect = 0.010, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 48/126 (38%), Gaps = 9/126 (7%)
Query: 75 QTPTAAAGPSLATAFPPEKTKSK------PNIKQGASTKTAAVRTKAGAVTPAAKKNEVT 128
+T A + T PPE+ + K P ++ T T + + ++TPA +
Sbjct: 678 ETEIGALNANKVTIPPPERKQEKAVAVSPPPVEPANDTVTTSTQATVPSLTPAGTQPTEQ 737
Query: 129 AVALEKPKKEEKTKLVNVETGKAKPEVNPMSAPSKYDDGTPTVILTPADMMSVAAMTANP 188
A T E+ A+PE ++A S G P+ TPA+ TA
Sbjct: 738 ATLNASSVPSGSTPSTTAESSSAEPEQATLNASSVPSGGAPS---TPAESRPAEPETARE 794
Query: 189 NSTEAP 194
+ + P
Sbjct: 795 GTADQP 800
>M.Javanica_Scaff10385g058621 on XP_806519 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 912
Score = 32.3 bits (72), Expect = 0.032, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 47/126 (37%), Gaps = 9/126 (7%)
Query: 75 QTPTAAAGPSLATAFPPEKTKSK------PNIKQGASTKTAAVRTKAGAVTPAAKKNEVT 128
+T A + T PPE+ K P ++ T T + + ++TPA +
Sbjct: 678 ETEIGALNANKFTIPPPERNPEKAVAVSPPPVEPANDTVTTSTQATVPSLTPAGTQPTEQ 737
Query: 129 AVALEKPKKEEKTKLVNVETGKAKPEVNPMSAPSKYDDGTPTVILTPADMMSVAAMTANP 188
A T E+ A+PE ++A S G P+ TPA+ TA
Sbjct: 738 ATVNASSVPSGSTPSTTAESRPAEPEQATLNASSVPSGGAPS---TPAESRPAEPETARE 794
Query: 189 NSTEAP 194
+ + P
Sbjct: 795 GTADQP 800
>M.Javanica_Scaff10385g058621 on XP_812313 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 920
Score = 25.4 bits (54), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 50 VGGGKKPSPDGAVKKEKKSEKPVQVQTPTAAAGPSLATAFPP 91
VGG P D AV+ +S +PT P+ A A+ P
Sbjct: 789 VGGASSPGSDAAVETGDRSTVQGDGSSPTLVGTPATADAYAP 830
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1061g012447
(268 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10469g058881
(125 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum] 23 6.5
XP_827747 VSG (Establishment) [Trypanosoma brucei] 23 9.4
>M.Javanica_Scaff10469g058881 on XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3346
Score = 23.1 bits (48), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
Query: 55 KIEKLHKKYCRSYYDIDEFLSKIEVNPKRNIFTVKMSDGLEYMIELKMKVLIEIGNNKSI 114
KIE K +S +D +L P+R + LEY+++ ++++GNNK
Sbjct: 2367 KIETQWKDTGKSGKHVDVYLP-----PRREHI---CTSNLEYLLKGNSDQIMKVGNNKIN 2418
Query: 115 QKFL 118
FL
Sbjct: 2419 HSFL 2422
>M.Javanica_Scaff10469g058881 on XP_827747 VSG (Establishment) [Trypanosoma brucei]
Length = 509
Score = 22.7 bits (47), Expect = 9.4, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Query: 18 IPCNGKEVEVKIKDDWK--EKREFIYLENVELKDRFVLRKIEKLHKKYCRS 66
+PC GK K WK E + +N D+ L ++ KL Y RS
Sbjct: 104 VPCKGKAATDPCKSHWKKWETAKVKAKDNNIRPDKLKLEEV-KLTSSYGRS 153
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10478g058911
(283 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Q05889 Galactofuranosyl glycosyltransferase (Others) [Leishm... 30 0.16
XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum] 26 3.1
ABC02174 Falstatin (Others) [Plasmodium falciparum] 26 3.6
XP_001347836 Falcipain 2 (Cysteine protease) [Plasmodium falc... 26 3.6
XP_001350415 PfEMP1 (Establishment) [Plasmodium falciparum] 25 5.1
>M.Javanica_Scaff10478g058911 on Q05889 Galactofuranosyl glycosyltransferase (Others)
[Leishmania donovani]
Length = 255
Score = 29.6 bits (65), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 12/51 (23%)
Query: 205 LLYIKFADDVMVRNLNGMLERIGIEINTNISIVKYSFLRDYIDVGTFIISQ 255
+ YI F ++ M R L +L+R+ ++ LRDY+D FII
Sbjct: 105 MTYIMFINNGMFRPLRSLLDRLAVD------------LRDYVDQNLFIIHH 143
>M.Javanica_Scaff10478g058911 on XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2994
Score = 26.2 bits (56), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 42/96 (43%), Gaps = 6/96 (6%)
Query: 112 SPLLDNVPSLRHWVYSRESWENIYTILSIWLQDHQDIHKSIPKRITRRNAEKIKNSYLNS 171
+P NVP+ +S N+ + + + H++ HK + +R ++ K+K+S + S
Sbjct: 1913 APTFCNVPAN---PCGDKSATNVVNVTEVAKEMHEEAHKDMLERSVKKVESKVKDSTVES 1969
Query: 172 M---DDKYNRWIRKLSPFSLSLNSAYLTIAEYLIQK 204
+ D + + +P L N +T QK
Sbjct: 1970 VLRADASKGEYKHEGNPDDLKHNMCNITKEHTNYQK 2005
>M.Javanica_Scaff10478g058911 on ABC02174 Falstatin (Others) [Plasmodium falciparum]
Length = 492
Score = 25.8 bits (55), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 126 YSRESWENIYTILSIWLQDHQDIHKSIPK--RITRRNAEKIKNSYLNSMDDKYNRWIRKL 183
Y +++++ + + QD ++P+ + R N SY++ DDK+ +R L
Sbjct: 335 YITNAFDDMIDLGGLCSQDDYPYVSNLPETCNLKRCNERYTIKSYVSIPDDKFKEALRYL 394
Query: 184 SPFSLSLNSA 193
P S+S+ ++
Sbjct: 395 GPISISIAAS 404
>M.Javanica_Scaff10478g058911 on XP_001347836 Falcipain 2 (Cysteine protease) [Plasmodium
falciparum]
Length = 492
Score = 25.8 bits (55), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 126 YSRESWENIYTILSIWLQDHQDIHKSIPK--RITRRNAEKIKNSYLNSMDDKYNRWIRKL 183
Y +++++ + + QD ++P+ + R N SY++ DDK+ +R L
Sbjct: 335 YITNAFDDMIDLGGLCSQDDYPYVSNLPETCNLKRCNERYTIKSYVSIPDDKFKEALRYL 394
Query: 184 SPFSLSLNSA 193
P S+S+ ++
Sbjct: 395 GPISISIAAS 404
>M.Javanica_Scaff10478g058911 on XP_001350415 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3056
Score = 25.4 bits (54), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 6/72 (8%)
Query: 113 PLLDNVPSLRHWVYSRESWENIYTILSIWLQDHQDIHKSIPKRITRRNAEKIKNSYLNSM 172
P + P W+ + W T + I ++H++ KS +T A++ ++ S
Sbjct: 2168 PTTETPPQFLRWI---KEWG---TNVCIQKEEHKEYVKSKCSNVTNLGAQESESKNCTSE 2221
Query: 173 DDKYNRWIRKLS 184
KY W RK S
Sbjct: 2222 IKKYQEWSRKRS 2233
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1031g012173
(94 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609566 variant erythrocyte surface antigen-1, beta subuni... 27 0.24
XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum] 25 0.85
XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum] 24 2.1
XP_001351318 PfEMP1 (Establishment) [Plasmodium falciparum] 23 2.5
XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum] 23 3.6
XP_001349034 PfEMP1 (Establishment) [Plasmodium falciparum] 23 5.4
>M.Javanica_Scaff1031g012173 on XP_001609566 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1062
Score = 26.6 bits (57), Expect = 0.24, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 10/62 (16%)
Query: 25 DFNSGGQQPPPLVGGADVVPIPLSDSERNCLGK-KDLPTFTVNCVPDTL---------PA 74
D N G PPL+ + P+P+ + G K T+ V+C +TL P+
Sbjct: 658 DDNPKGHFDPPLLKFPQICPVPMGWQSESKYGHFKGQGTYPVHCTGNTLSHLLEYYCDPS 717
Query: 75 KC 76
+C
Sbjct: 718 RC 719
>M.Javanica_Scaff1031g012173 on XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2994
Score = 25.0 bits (53), Expect = 0.85, Method: Composition-based stats.
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 79 QDYNNLKNKMQSCSLF 94
QD+NN+K+K+ C+ F
Sbjct: 585 QDFNNVKDKINRCTKF 600
>M.Javanica_Scaff1031g012173 on XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2858
Score = 23.9 bits (50), Expect = 2.1, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 7/58 (12%)
Query: 41 DVVPIP---LSD-SERNCLGKKDLPTFTV---NCVPDTLPAKCSEQDYNNLKNKMQSC 91
D +P P LS+ SE CL +KDL NC+ A C + Y ++ + C
Sbjct: 1907 DYIPQPFRWLSEWSETYCLAQKDLLETMKNCENCMKKNKNADCEQTQYGACRDCKRKC 1964
>M.Javanica_Scaff1031g012173 on XP_001351318 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2169
Score = 23.5 bits (49), Expect = 2.5, Method: Composition-based stats.
Identities = 7/14 (50%), Positives = 12/14 (85%)
Query: 79 QDYNNLKNKMQSCS 92
+DYN +K K++SC+
Sbjct: 1481 EDYNKIKKKLKSCT 1494
>M.Javanica_Scaff1031g012173 on XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2238
Score = 23.1 bits (48), Expect = 3.6, Method: Composition-based stats.
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 79 QDYNNLKNKMQSCS 92
+DYN +KNK+ C+
Sbjct: 1489 EDYNKIKNKISHCT 1502
>M.Javanica_Scaff1031g012173 on XP_001349034 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 22.7 bits (47), Expect = 5.4, Method: Composition-based stats.
Identities = 6/14 (42%), Positives = 12/14 (85%)
Query: 79 QDYNNLKNKMQSCS 92
+DYN ++ K++SC+
Sbjct: 1510 EDYNKIRKKLKSCT 1523
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10568g059200
(195 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10415g058719
(287 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001611206 variant erythrocyte surface antigen-1, alpha subun... 25 6.4
XP_811362 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 8.1
XP_809010 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 8.2
XP_807444 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 8.4
>M.Javanica_Scaff10415g058719 on XP_001611206 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1285
Score = 25.0 bits (53), Expect = 6.4, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 177 EINLIGYKIELLEKQKVEYPQELKSKIIDIGNKI 210
E++ + K++ LE +K E +E+K ++ IGN +
Sbjct: 630 ELDGVMKKVKALEGEKTEGIKEVKDVLVTIGNVV 663
>M.Javanica_Scaff10415g058719 on XP_811362 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 524
Score = 24.6 bits (52), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 136 IEYNNCYETSILYKSETNNNFK 157
+ ++ +S+LYKS TNNN K
Sbjct: 435 VSDDDAAASSLLYKSGTNNNNK 456
>M.Javanica_Scaff10415g058719 on XP_809010 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 774
Score = 24.6 bits (52), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 136 IEYNNCYETSILYKSETNNNFK 157
+ ++ +S+LYKS TNNN K
Sbjct: 435 VSDDDAAASSLLYKSGTNNNNK 456
>M.Javanica_Scaff10415g058719 on XP_807444 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 777
Score = 24.6 bits (52), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 136 IEYNNCYETSILYKSETNNNFK 157
+ ++ +S+LYKS TNNN K
Sbjct: 437 VSDDDAAASSLLYKSGTNNNNK 458
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10620g059353
(449 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAX07983 alpha-9 giardin (Others) [Giardia duodenalis] 27 1.5
Q4VPP0 Giardin subunit alpha-9 (Others) [Giardia duodenalis] 27 1.5
XP_001350936 PfEMP1 (Establishment) [Plasmodium falciparum] 28 1.8
XP_001609565 variant erythrocyte surface antigen-1, alpha subun... 25 9.3
>M.Javanica_Scaff10620g059353 on AAX07983 alpha-9 giardin (Others) [Giardia duodenalis]
Length = 255
Score = 27.3 bits (59), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 9/36 (25%), Positives = 21/36 (58%)
Query: 407 IPGPIKQLMEQKKQNQFYMLIGIYSHRHKDRGKINY 442
+ +K++++ K ++ L Y+ +H+D+ INY
Sbjct: 8 LTTELKKIIDSKNESALVQLTSQYASKHRDKVVINY 43
>M.Javanica_Scaff10620g059353 on Q4VPP0 Giardin subunit alpha-9 (Others) [Giardia duodenalis]
Length = 255
Score = 27.3 bits (59), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 9/36 (25%), Positives = 21/36 (58%)
Query: 407 IPGPIKQLMEQKKQNQFYMLIGIYSHRHKDRGKINY 442
+ +K++++ K ++ L Y+ +H+D+ INY
Sbjct: 8 LTTELKKIIDSKNESALVQLTSQYASKHRDKVVINY 43
>M.Javanica_Scaff10620g059353 on XP_001350936 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2163
Score = 27.7 bits (60), Expect = 1.8, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 11/45 (24%)
Query: 33 SSGDGAPVACTESGAVKG----YKGDNNIAIFKGIPYASAQRWKE 73
+ G+GAP T G +K Y+GDNN +G WKE
Sbjct: 552 NGGNGAPATATGGGQIKNWQCHYEGDNNDNCVEG-------EWKE 589
>M.Javanica_Scaff10620g059353 on XP_001609565 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1341
Score = 25.4 bits (54), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 51/131 (38%), Gaps = 28/131 (21%)
Query: 193 GLLDQIFAIKWVKNNIANFGGXWSGEGLATLSKENPKIHGNYGLLDQIFAIKWVKNNIAN 252
GL D++ I+W+ N N GE + T+ K I G+ K+ +
Sbjct: 1050 GLRDEVKKIEWIYNGSEN-----GGEYMKTVGKALRDIKGD-------------KDTSSA 1091
Query: 253 FGGDPEKITVGGQSAGGMSIYYLAFSPLTTDLMKAVTIESAGAFYPNDPKLDWVNPSSIQ 312
T SA + YL SPLT +L AV+ G + L WV +
Sbjct: 1092 VALSTAPTTPSNLSALTKNSEYL--SPLTGELYTAVSATFGGTY------LSWV--LYLS 1141
Query: 313 DAEKNGIAHLS 323
DA + G+ LS
Sbjct: 1142 DALEGGLQSLS 1152
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff104g001968
(131 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001611442 variant erythrocyte surface antigen-1, alpha subun... 27 0.26
XP_827769 VSG (Establishment) [Trypanosoma brucei] 27 0.46
XP_829792 VSG (Establishment) [Trypanosoma brucei] 26 0.75
XP_001609540 variant erythrocyte surface antigen-1, alpha subun... 26 1.0
XP_818092 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.4
XP_001350409 PfEMP1 (Establishment) [Plasmodium falciparum] 25 1.9
XP_846884 VSG (Establishment) [Trypanosoma brucei] 25 2.2
XP_829797 VSG (Establishment) [Trypanosoma brucei] 24 3.1
XP_001610196 variant erythrocyte surface antigen-1, alpha subun... 24 3.4
XP_829768 VSG (Establishment) [Trypanosoma brucei] 24 3.5
XP_001611366 variant erythrocyte surface antigen-1, beta subuni... 24 3.5
XP_001610721 variant erythrocyte surface antigen-1, alpha subun... 23 5.9
XP_001610568 variant erythrocyte surface antigen-1, alpha subun... 23 6.2
XP_827768 VSG (Establishment) [Trypanosoma brucei] 23 6.3
XP_001609450 variant erythrocyte surface antigen-1, alpha subun... 23 7.6
XP_001609163 variant erythrocyte surface antigen-1, alpha subun... 23 8.3
XP_001609314 variant erythrocyte surface antigen-1, beta subuni... 23 9.5
XP_812042 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 9.9
>M.Javanica_Scaff104g001968 on XP_001611442 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1350
Score = 27.3 bits (59), Expect = 0.26, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 23/47 (48%), Gaps = 8/47 (17%)
Query: 71 DDNG----RMC--CYGSKCDNSVCKK-CTING-VKCAKNGDCCSGIC 109
DDNG R C C GS + C+ CT +G KCA G CC C
Sbjct: 215 DDNGHHLGRGCTRCKGSGGSDCSCESDCTTSGKCKCAGKGKCCKCYC 261
>M.Javanica_Scaff104g001968 on XP_827769 VSG (Establishment) [Trypanosoma brucei]
Length = 533
Score = 26.6 bits (57), Expect = 0.46, Method: Composition-based stats.
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 94 NGVKCAKNGDCCSGICNGGVCIPYT 118
NG A G CSG N G+CI +T
Sbjct: 301 NGYLGAFRGTDCSGASNSGMCIKFT 325
>M.Javanica_Scaff104g001968 on XP_829792 VSG (Establishment) [Trypanosoma brucei]
Length = 514
Score = 26.2 bits (56), Expect = 0.75, Method: Composition-based stats.
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 102 GDCCSGICNGGVCIPYTPGT 121
G CSG N G+C+ Y GT
Sbjct: 310 GTGCSGKSNQGICVMYKAGT 329
>M.Javanica_Scaff104g001968 on XP_001609540 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1349
Score = 25.8 bits (55), Expect = 1.0, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
Query: 81 SKCDNSVCKKCTINGVKCAKNGDCCSGICNGGVCIPYTPGTGGLPIP 127
S C++ C CT + KC + + S IC C+ P T G+P P
Sbjct: 861 SICNSPKCPGCTKHSTKCGQKAE--STICEK--CL--QPTTTGVPSP 901
Score = 23.9 bits (50), Expect = 4.4, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Query: 13 LIESVKSQDCRGERVECDDKNNKCCRG 39
L E+ ++ +CRG + +CD NKC +G
Sbjct: 1152 LSEAFRNIECRGCKGQCDP--NKCKKG 1176
>M.Javanica_Scaff104g001968 on XP_818092 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 884
Score = 25.4 bits (54), Expect = 1.4, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 82 KCDNSVCKKCTINGVKCAKNGDCCSGI 108
K D+ V K C + V+ A GD CS I
Sbjct: 481 KADDRVSKLCPSSDVEDASTGDACSPI 507
>M.Javanica_Scaff104g001968 on XP_001350409 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2223
Score = 25.0 bits (53), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 37/98 (37%), Gaps = 8/98 (8%)
Query: 23 RGERVECDDKNNKCCRGLNCKNERINKELGLSIFKCF----KANCIRDGRNCDDNGRMCC 78
+ ER E + N K +NE + K F KA N DD+
Sbjct: 1330 QKERYETESDNAKSKSDDTSENEFVKKLEEYKSIDLFLGKLKAGPCSKTNNGDDDINFKE 1389
Query: 79 YGSKC--DNSVCKKCTINGVKCAKNGDCCSGICNGGVC 114
SK ++C C+ VKC NGD C G NG C
Sbjct: 1390 NDSKTFKHTNLCDPCSEFKVKC--NGDGCRGGANGNTC 1425
>M.Javanica_Scaff104g001968 on XP_846884 VSG (Establishment) [Trypanosoma brucei]
Length = 493
Score = 24.6 bits (52), Expect = 2.2, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 8/43 (18%)
Query: 80 GSKCDNSVCKKCTINGVKCAKNGDCCSGIC--NGGVCIPYTPG 120
G K D++ +C+ KNGD C G C +G +C P G
Sbjct: 396 GQKDDDTKENECS------NKNGDKCKGDCVLDGDICKPKKKG 432
>M.Javanica_Scaff104g001968 on XP_829797 VSG (Establishment) [Trypanosoma brucei]
Length = 509
Score = 24.3 bits (51), Expect = 3.1, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 100 KNGDCCSGICNGGVCIPYTPGTGGLPIPGFGG 131
K G C+G G+CI Y G G P F
Sbjct: 306 KTGSSCNGDKTQGICIKYA-GYDGTPTKDFAA 336
>M.Javanica_Scaff104g001968 on XP_001610196 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1330
Score = 24.3 bits (51), Expect = 3.4, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Query: 13 LIESVKSQDCRGERVECDDKNNKCCRGLN 41
L E+ ++ +CRG + +CD NKC +G++
Sbjct: 1134 LSEAFRNIECRGCKGQCDP--NKCKKGVH 1160
>M.Javanica_Scaff104g001968 on XP_829768 VSG (Establishment) [Trypanosoma brucei]
Length = 485
Score = 23.9 bits (50), Expect = 3.5, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
Query: 105 CSGICNGGVCIPY-TPGTGGLPIP 127
C+G+ N G C+ Y TG +PIP
Sbjct: 295 CNGVANAG-CVKYKATSTGTVPIP 317
>M.Javanica_Scaff104g001968 on XP_001611366 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1173
Score = 24.3 bits (51), Expect = 3.5, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 22/58 (37%), Gaps = 5/58 (8%)
Query: 78 CYGSKCDNSVCKKCTINGVKCAKNGDCCSGICNGGV--CIPYTPGTGGLPIP---GFG 130
C G C N + +G CSG + GV C TG LP+ GFG
Sbjct: 990 CKGDGCQGQAGGSGCGNDCRSGSHGTTCSGAGSAGVCKCTSVVSCTGVLPVLYKYGFG 1047
>M.Javanica_Scaff104g001968 on XP_001610721 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1331
Score = 23.5 bits (49), Expect = 5.9, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Query: 13 LIESVKSQDCRGERVECDDKNNKCCRG 39
L E+ ++ +CRG + +CD NKC +G
Sbjct: 1129 LSEAFRNIECRGCKGQCDP--NKCKKG 1153
>M.Javanica_Scaff104g001968 on XP_001610568 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1329
Score = 23.5 bits (49), Expect = 6.2, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 6/47 (12%)
Query: 81 SKCDNSVCKKCTINGVKCAKNGDCCSGICNGGVCIPYTPGTGGLPIP 127
S C++ C C + KC + + S IC C+ P T G+P P
Sbjct: 847 SICNSPKCSACDKHSTKCGQKAE--STICEK--CL--QPTTTGVPSP 887
>M.Javanica_Scaff104g001968 on XP_827768 VSG (Establishment) [Trypanosoma brucei]
Length = 489
Score = 23.1 bits (48), Expect = 6.3, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 18/31 (58%), Gaps = 8/31 (25%)
Query: 14 IESVKSQDCRGERVE--------CDDKNNKC 36
++ KS+DC+GE+ E C+ K+ +C
Sbjct: 423 VDPQKSEDCKGEKDETKCNKKDGCEFKDGEC 453
>M.Javanica_Scaff104g001968 on XP_001609450 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1309
Score = 23.1 bits (48), Expect = 7.6, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Query: 13 LIESVKSQDCRGERVECDDKNNKCCRG 39
L E+ + +CRG + +CD NKC +G
Sbjct: 1109 LSEAFQQIECRGCKGQCDP--NKCKKG 1133
>M.Javanica_Scaff104g001968 on XP_001609163 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1360
Score = 23.1 bits (48), Expect = 8.3, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Query: 13 LIESVKSQDCRGERVECDDKNNKCCRG 39
L E+ + +CRG + +CD NKC +G
Sbjct: 1166 LSEAFQQIECRGCKGQCDP--NKCKKG 1190
>M.Javanica_Scaff104g001968 on XP_001609314 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1115
Score = 22.7 bits (47), Expect = 9.5, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 11/25 (44%), Gaps = 1/25 (4%)
Query: 67 GRNCDDNGRMCCYGSKCDNSVCKKC 91
GR CD G CC C+KC
Sbjct: 161 GRKCDCTGAQCCTNGGASYE-CEKC 184
>M.Javanica_Scaff104g001968 on XP_812042 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 227
Score = 22.3 bits (46), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 9/32 (28%), Positives = 16/32 (50%), Gaps = 7/32 (21%)
Query: 5 IIIYFIFVLIESVKSQDCRGERVECDDKNNKC 36
++++ +FV++ CRG DK N C
Sbjct: 48 VLLFLLFVMM-------CRGSGATATDKPNSC 72
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10616g059341
(398 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351513 PfEMP1 (Establishment) [Plasmodium falciparum] 28 1.1
XP_001351514 PfEMP1 (Establishment) [Plasmodium falciparum] 28 1.3
>M.Javanica_Scaff10616g059341 on XP_001351513 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2152
Score = 28.1 bits (61), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 263 CEHGGFKCLQQLD----ILLHKFGVNAYFCGHDHNLQHIKIEKENLDKNNIEDEEEKKTF 318
C GF C + ++ + + K + +F + + + I+ +KE DK + +EE K +
Sbjct: 355 CSRNGFDCEKTVNARGKVRMGKGCTDCFFACNPY-IDWIEKQKEQFDKQKQKYDEEIKKY 413
Query: 319 VNYIVSGAASRSDRSAK 335
S + R+ R+A+
Sbjct: 414 TKVASSSSGGRAKRAAR 430
>M.Javanica_Scaff10616g059341 on XP_001351514 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2201
Score = 27.7 bits (60), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 263 CEHGGFKCLQQLD----ILLHKFGVNAYFCGHDHNLQHIKIEKENLDKNNIEDEEEKKTF 318
C GF C + ++ + + K + +F + + + I+ +KE DK + +EE K +
Sbjct: 355 CSRNGFDCEKTVNARGKVRMGKGCTDCFFACNPY-IDWIEKQKEQFDKQKQKYDEEIKKY 413
Query: 319 VNYIVSGAASRSDRSAK 335
S + R+ R+A+
Sbjct: 414 TKVASSSSGGRAKRAAR 430
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10466g058873
(199 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349437 PfEMP1 (Establishment) [Plasmodium falciparum] 25 5.4
>M.Javanica_Scaff10466g058873 on XP_001349437 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2231
Score = 24.6 bits (52), Expect = 5.4, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Query: 55 FYCFFVPLKDNVQIDLHFYKNISCSDIVYGFAEVNDNGLKLPTKLDL 101
+Y F+ KD++ D++ S DI V N + +PTK+ +
Sbjct: 2164 YYDFY---KDDIYYDVNDDDKTSMDDIYVDHNNVTSNNMDVPTKMHI 2207
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1053g012355
(276 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001348275 RAP1 (Invasion) [Plasmodium falciparum] 25 4.9
XP_805548 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 5.3
XP_819344 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.9
>M.Javanica_Scaff1053g012355 on XP_001348275 RAP1 (Invasion) [Plasmodium falciparum]
Length = 782
Score = 25.4 bits (54), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 220 KTMDVIFNDFIEFRGEFVNKAIHTSILQSLTSKNETSKCPENKNFN 265
+TM I ND+ E + + + + L+ +NE SK P +K+ N
Sbjct: 688 RTMVTIINDYFEAKKKELTVIVSRMKTDMLSLQNEESKIPNDKSAN 733
>M.Javanica_Scaff1053g012355 on XP_805548 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1044
Score = 25.0 bits (53), Expect = 5.3, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 29 GSNENSTLISVNETENNYLSYNLKANN-TADLESIE 63
G N N LIS+ E +N+ YNL A T LE I+
Sbjct: 424 GKNNNEELISLYENKNSDGKYNLVAVRLTEKLERIK 459
>M.Javanica_Scaff1053g012355 on XP_819344 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 861
Score = 24.6 bits (52), Expect = 6.9, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 23 LIYKEIGSNENSTLISVNETENNYLSYNLKANNTADLESIEIQSQQNYNKTYQQILSKIS 82
L+YK IG+N LI++ E + + + + S ++Q ++ T++++ ++S
Sbjct: 420 LLYK-IGNNNEEELIALYE-KKKVDAEKPSPGMVSVILSAQLQRVKDVLATWKKVDERVS 477
Query: 83 NRCISKDEFKELHGNRTKP--GLVTIL 107
N C+S + K+ P GLV L
Sbjct: 478 NLCLSFNVEKDTSSGTAMPTNGLVGFL 504
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10608g059317
(53 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1055g012372
(587 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351079 PfEMP1 (Establishment) [Plasmodium falciparum] 30 0.34
XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum] 28 2.1
XP_001351561 PfEMP1 (Establishment) [Plasmodium falciparum] 27 3.8
XP_001348946 PfEMP1 (Establishment) [Plasmodium falciparum] 27 3.8
XP_001609540 variant erythrocyte surface antigen-1, alpha subun... 27 5.6
>M.Javanica_Scaff1055g012372 on XP_001351079 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2203
Score = 30.4 bits (67), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 202 ELFCLEKGIEKHEKDDKDIKLFFDKYIDKLVEGGNKKQIFDLSYWSVF 249
E C +K +E+ +K+ ++IK FDK D ++EGG + +LS+ V
Sbjct: 659 ECGCFQKWVEQKKKEWQNIKKHFDKQTDIVIEGG---PLGELSHCGVL 703
>M.Javanica_Scaff1055g012372 on XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2994
Score = 27.7 bits (60), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Query: 62 CFKLEIWLKLKEIQFYRINN-------QFKLGSPQ--NGQVPFIQFNGDFIEGMENI--I 110
C +E W+K+KE ++ +IN + P+ N + F+ DFI +E I
Sbjct: 616 CECVEKWIKIKEAEWKKINQHYNQQKKHYTYSVPRWVNSYLTHQHFSSDFINALEAFKNI 675
Query: 111 NKLKHLGKPLAENENEKKVEEIVDNILFPILIK 143
L++L + ++ +K+ I D+++ ++ K
Sbjct: 676 RGLENLKECSSDTCKIEKIRTIDDDLIKELISK 708
>M.Javanica_Scaff1055g012372 on XP_001351561 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3553
Score = 26.9 bits (58), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 38 NWKENVVYLIRYPRISSLP-DLDVNCFKLEIWLKLKEIQFYRINNQFK 84
NWK ++ I ++ D + NC E W K KE ++ ++ +K
Sbjct: 597 NWKNDLTNCINNTNVTDCKNDCNTNCKCFENWAKTKENEWKKVKTIYK 644
>M.Javanica_Scaff1055g012372 on XP_001348946 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3553
Score = 26.9 bits (58), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 38 NWKENVVYLIRYPRISSLP-DLDVNCFKLEIWLKLKEIQFYRINNQFK 84
NWK ++ I ++ D + NC E W K KE ++ ++ +K
Sbjct: 597 NWKNDLTNCINNTNVTDCKNDCNTNCKCFENWAKTKENEWKKVKTIYK 644
>M.Javanica_Scaff1055g012372 on XP_001609540 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1349
Score = 26.6 bits (57), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 367 GKEIIQNEEELNGIEEDGITEIEEVKKE-------VKEIDENKGLIIGYEDDRINILSSF 419
GK+ +N+E + G+ ++ V+ E KE+D +KG DR+N L S
Sbjct: 32 GKDGKKNDECICGLAAAVTDLLQSVQLEYNGYQGDTKEVDTSKGASEQQVTDRLNGLFSL 91
Query: 420 VQNM 423
VQ +
Sbjct: 92 VQGL 95
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10452g058827
(76 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAA29462 ABRA (Others) [Plasmodium falciparum] 25 0.69
ABQ59247 RCC1 (Establishment) [Toxoplasma gondii] 23 2.9
XP_819342 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.4
>M.Javanica_Scaff10452g058827 on AAA29462 ABRA (Others) [Plasmodium falciparum]
Length = 743
Score = 24.6 bits (52), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Query: 3 LFKVLIFNSILWSLITSVKVDKNQ 26
LF +L+F I W++I+ K DKNQ
Sbjct: 8 LFSLLLF-VIRWNIISCNKNDKNQ 30
>M.Javanica_Scaff10452g058827 on ABQ59247 RCC1 (Establishment) [Toxoplasma gondii]
Length = 255
Score = 22.7 bits (47), Expect = 2.9, Method: Composition-based stats.
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 46 GAGSPVAPQLRKYEETLKPK 65
G S APQL + E+ LKP+
Sbjct: 44 GDSSRGAPQLAEEEDPLKPR 63
>M.Javanica_Scaff10452g058827 on XP_819342 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 825
Score = 21.9 bits (45), Expect = 5.4, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 6/48 (12%)
Query: 24 KNQNDLAIVEETSEDLNEILNDGAGSPVAPQLRKYEETLKPKQKNYKK 71
K++++L ++ E DG SPVA +L + E +K K +K+
Sbjct: 418 KSKDELVLLYEKRN------GDGPYSPVAMRLTEQLERIKSAVKTWKE 459
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10561g059178
(627 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_815267 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.98
XP_813615 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.9
>M.Javanica_Scaff10561g059178 on XP_815267 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 718
Score = 28.9 bits (63), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 56/145 (38%), Gaps = 47/145 (32%)
Query: 448 DAPEFINASFSTSTITILIQGHTLFGYNYDEKHDKFTRAKTYPKMLHNRILFYPTGAFPL 507
DA + AS +S G L G +YDEKH + P PTG++ +
Sbjct: 521 DATPLLGASLDSS------GGEKLLGLSYDEKHQWQPIYGSTPAT--------PTGSWEV 566
Query: 508 LNESIILIN-----GKVYATYNVIKNEPHMLGNLEELYPNLPDGLLSGIPATPDFSLYYM 562
+ +++ G VY I EP + G+ + + PN TPD S +Y+
Sbjct: 567 NKKYHVVLTMANKMGSVY-----IDGEP-LAGSGQTVVPN---------EGTPDISHFYI 611
Query: 563 -------------LTANLSFVYNTQ 574
+TA F+YN Q
Sbjct: 612 GSYNSSNMPTESHVTAKNVFLYNRQ 636
>M.Javanica_Scaff10561g059178 on XP_813615 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 706
Score = 27.3 bits (59), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 51/126 (40%), Gaps = 34/126 (26%)
Query: 448 DAPEFINASFSTSTITILIQGHTLFGYNYDEKHDKFTRAKTYPKMLHNRILFYPTGAFPL 507
DA + AS +S G L G +YDEKH + P PTG++ +
Sbjct: 521 DATPLLGASLDSS------GGEKLLGLSYDEKHQWQPIYGSTPAT--------PTGSWEV 566
Query: 508 LNESIILIN-----GKVYATYNVIKNEPHMLGNLEELYPNLPDGLLSGIPATPDFSLYYM 562
+ +++ G VY I EP + G+ + + P+ TPD S +Y+
Sbjct: 567 NKKYHVVLTMANKMGSVY-----IDGEP-LAGSGQTVVPD---------EGTPDISHFYI 611
Query: 563 LTANLS 568
+ N S
Sbjct: 612 GSYNSS 617
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10559g059175
(82 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350935 PfEMP1 (Establishment) [Plasmodium falciparum] 23 2.7
XP_820757 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.3
XP_001350595 PfEMP1 (Establishment) [Plasmodium falciparum] 22 5.2
XP_001349034 PfEMP1 (Establishment) [Plasmodium falciparum] 22 7.8
XP_001349737 PfEMP1 (Establishment) [Plasmodium falciparum] 22 8.2
XP_001350796 PfEMP1 (Establishment) [Plasmodium falciparum] 22 9.2
>M.Javanica_Scaff10559g059175 on XP_001350935 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2268
Score = 23.1 bits (48), Expect = 2.7, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 26/61 (42%)
Query: 21 PFFQQASEPTPLSSQNWNENINICQNSQLFQKQEFNQFYGIVPFTDISTDFLQQNQQIYE 80
PF + + + +N NIN+ NS K N Y + + S + ++ IY+
Sbjct: 2010 PFITSIHDRDLYTGEEYNYNINMSTNSMDDPKYVSNNVYSGIDLINDSLNSGNEHIDIYD 2069
Query: 81 E 81
E
Sbjct: 2070 E 2070
>M.Javanica_Scaff10559g059175 on XP_820757 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 912
Score = 22.7 bits (47), Expect = 3.3, Method: Composition-based stats.
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 25 QASEPTPLSSQNWNEN 40
++SEP+P+SS + N N
Sbjct: 748 KSSEPSPVSSDSVNPN 763
>M.Javanica_Scaff10559g059175 on XP_001350595 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2256
Score = 22.3 bits (46), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 18 QKLPFFQQASEPTPLSSQNWNENINICQNSQLFQKQEFNQFYGIVPFTDISTDFLQQNQ- 76
Q+ PF + + + ++ N+N+ N + ++ N + GI D+ D L N+
Sbjct: 1991 QEKPFITSIHDRNLYTGEEYSYNVNMVNNDNIPINRDNNPYSGI----DLINDSLNSNKV 2046
Query: 77 QIYEE 81
IY+E
Sbjct: 2047 DIYDE 2051
>M.Javanica_Scaff10559g059175 on XP_001349034 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 21.9 bits (45), Expect = 7.8, Method: Composition-based stats.
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 12 EEGIHQQKLPFFQQASEPTPLSSQNW 37
+E + Q FFQ E PL ++N+
Sbjct: 217 KEKLEQNLKKFFQNIDEKLPLKAKNY 242
>M.Javanica_Scaff10559g059175 on XP_001349737 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2199
Score = 21.9 bits (45), Expect = 8.2, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Query: 18 QKLPFFQQASEPTPLSSQNWNENINICQNSQLFQKQEFNQFYGIVPFTDISTDFLQQNQQ 77
++ PF + L+ + ++ N+N+ NS K N Y + D+ D L N+
Sbjct: 1960 EEKPFITSIHDRNLLNGEEYSYNVNMSTNSMDDPKYVSNNVYSGI---DLINDSLSGNKH 2016
Query: 78 --IYEE 81
IY+E
Sbjct: 2017 IDIYDE 2022
>M.Javanica_Scaff10559g059175 on XP_001350796 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2646
Score = 21.6 bits (44), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 15/61 (24%), Positives = 25/61 (40%)
Query: 21 PFFQQASEPTPLSSQNWNENINICQNSQLFQKQEFNQFYGIVPFTDISTDFLQQNQQIYE 80
PF + + + +N N+N+ NS K N Y + + S + Q IY+
Sbjct: 2389 PFITSIHDRNLYTGEEYNYNVNMSTNSMDDTKYVSNNVYSGIDLINDSLNSGNQPIDIYD 2448
Query: 81 E 81
E
Sbjct: 2449 E 2449
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10603g059305
(91 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349207 EBA-175 (Adhesin) [Plasmodium falciparum] 23 5.3
>M.Javanica_Scaff10603g059305 on XP_001349207 EBA-175 (Adhesin) [Plasmodium falciparum]
Length = 1462
Score = 22.7 bits (47), Expect = 5.3, Method: Composition-based stats.
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 3 VRINRVASFFSSLLNN 18
VR++R+ SF S +NN
Sbjct: 129 VRVSRILSFLDSRINN 144
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10374g058590
(489 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAA69859 ROP1 (Establishment) [Toxoplasma gondii] 28 0.76
XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum] 27 3.2
AAK19757 MIC8 (Invasion) [Toxoplasma gondii] 26 5.0
XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum] 25 9.8
>M.Javanica_Scaff10374g058590 on AAA69859 ROP1 (Establishment) [Toxoplasma gondii]
Length = 255
Score = 28.5 bits (62), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 12 IPFLILLCSFFHNCGAPLSAVSSLNGVPTKTINASMPKLGSLGNPR 57
+P ++L+ S F + P +A+SS NGVP A + L S G PR
Sbjct: 5 LPIILLVLSVFFSS-TPSAALSSHNGVPAYPSYAQV-SLSSNGEPR 48
>M.Javanica_Scaff10374g058590 on XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2980
Score = 26.9 bits (58), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 11/17 (64%), Positives = 13/17 (76%)
Query: 461 EANKKLIDEIGKFFKPA 477
EANK + D IG+ FKPA
Sbjct: 2150 EANKTIFDNIGETFKPA 2166
>M.Javanica_Scaff10374g058590 on AAK19757 MIC8 (Invasion) [Toxoplasma gondii]
Length = 255
Score = 25.8 bits (55), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 6/60 (10%)
Query: 258 DTILVSFLQIPDEGRQLLFETFDEILTDLKNSKNKKDEHGKIIKGSSQHPAVHLKKYHDK 317
D+I VS + RQ + T +L LK + DE+ + + S ++ A ++Y DK
Sbjct: 25 DSIFVSAI------RQNVQHTHSALLAKLKEPPDPDDENSWLCRISKKYDACGSREYSDK 78
>M.Javanica_Scaff10374g058590 on XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3346
Score = 25.4 bits (54), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 16/78 (20%)
Query: 135 VEEHNKYIEEQKELYEETKGKEGFDLDKISKNLLDRRHASYSKISSYELIKEFYGIDLEY 194
+ + +YI +KE Y+ KGK FD++K K + + YS+ + E +KE
Sbjct: 1483 CKAYKEYITNKKEEYDSQKGK--FDVEKTEKK---QGYEDYSEKQASEYLKE-------- 1529
Query: 195 KIPKTIEQRKNLVTKLLE 212
K I+ N + K+ E
Sbjct: 1530 ---KCIKSSCNCMKKVTE 1544
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10427g058767
(313 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_804241 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.35
XP_804171 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.56
XP_804332 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.94
XP_805359 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 1.0
XP_805897 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.4
AAO72427 SAG2 (Others) [Toxoplasma gondii] 26 2.5
XP_802262 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 3.0
XP_808562 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 3.1
XP_829789 VSG (Establishment) [Trypanosoma brucei] 25 6.0
XP_804895 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.8
XP_829762 VSG (Establishment) [Trypanosoma brucei] 25 7.6
XP_808957 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 7.8
XP_820186 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 8.3
XP_810932 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 8.4
XP_820183 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 9.8
>M.Javanica_Scaff10427g058767 on XP_804241 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 765
Score = 29.3 bits (64), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 147 IGLNRAAIELSYDPTVVQTWAD-GSSVDYASVPTPGYXPTVVQTWADGSSVD 197
I L R EL+ +V+ TWA +S +S PT G + T +DG+ VD
Sbjct: 475 ISLARLTKELNTIRSVLSTWAQLDASFSKSSTPTAGLVAVLSNTASDGTWVD 526
>M.Javanica_Scaff10427g058767 on XP_804171 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 787
Score = 28.5 bits (62), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 142 FRSFYIGLNRAAIELSYDPTVVQTWADGSS-VDYASVPTPGYXPTVVQTWADGSSVD 197
+ S ++ L+R ELS +V++ WA + S+PT G + T ++G+ +D
Sbjct: 452 YESTFMSLSRLTEELSTINSVLKNWAQKDAFFSKLSIPTAGLVAVLSDTASNGTWID 508
>M.Javanica_Scaff10427g058767 on XP_804332 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 613
Score = 27.7 bits (60), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 142 FRSFYIGLNRAAIELSYDPTVVQTWADGSSVDYA-SVPTPGYXPTVVQTWADGSSVD 197
+ S I L+R ELS +V+ TW+ + + S+PT G + T ++G+ +D
Sbjct: 471 YESSVISLSRLTEELSTIKSVLSTWSQTDAFFSSFSIPTAGLVAVLSDTASNGTWID 527
>M.Javanica_Scaff10427g058767 on XP_805359 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 788
Score = 27.7 bits (60), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 147 IGLNRAAIELSYDPTVVQTWADGSS-VDYASVPTPGYXPTVVQTWADGSSVD 197
I L+R ELS +V++TWA + ++PT G + T ++G+ +D
Sbjct: 459 ISLSRLTEELSTINSVLKTWAKKDAFFSKLAIPTAGLVAVLSDTASNGTWID 510
>M.Javanica_Scaff10427g058767 on XP_805897 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 755
Score = 26.6 bits (57), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 142 FRSFYIGLNRAAIELSYDPTVVQTWADGSS-VDYASVPTPGYXPTVVQTWADGSSVD 197
++S + L+R ELS +V+ TWA + ++PT G + ++G+ +D
Sbjct: 459 YKSSVMSLSRLTGELSTIKSVLSTWAKKDAFFSKLAIPTAGLVAVLSDAASNGTWID 515
>M.Javanica_Scaff10427g058767 on AAO72427 SAG2 (Others) [Toxoplasma gondii]
Length = 186
Score = 25.8 bits (55), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 7/55 (12%)
Query: 244 GCPSGLNDTGSNPQKGSPEDCVCMYK--GADGNIN--WNDISCYHK-LAGGICKL 293
G P+G N+ GS+ +P+DC + + GADG + ++ +S K LA G+ L
Sbjct: 129 GAPAGRNNDGSSAP--TPKDCKLIVRVPGADGRVTSGFDPVSLTGKVLAPGLAGL 181
>M.Javanica_Scaff10427g058767 on XP_802262 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 443
Score = 26.2 bits (56), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 147 IGLNRAAIELSYDPTVVQTWADGSS-VDYASVPTPGYXPTVVQTWADGS 194
+ L+R ELS +V+ TWA + S+PT G + T ++G+
Sbjct: 295 MSLSRLTGELSTTKSVLSTWAKKDAFFSSVSIPTAGLVAVLSDTASNGT 343
>M.Javanica_Scaff10427g058767 on XP_808562 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 755
Score = 26.2 bits (56), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 142 FRSFYIGLNRAAIELSYDPTVVQTWADGSS-VDYASVPTPGYXPTVVQTWADGSSVD 197
++S + L+R ELS +V+ TWA + ++PT G + ++G+ +D
Sbjct: 459 YKSSVMSLSRLTGELSTIRSVLSTWAKKDAFFSKLAIPTAGLVAVLSDAASNGTWID 515
>M.Javanica_Scaff10427g058767 on XP_829789 VSG (Establishment) [Trypanosoma brucei]
Length = 526
Score = 25.0 bits (53), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 17/42 (40%)
Query: 205 GVLNYDPTVVQTWADGSSVDYASVPTPGVPTTQIQPWGPGCP 246
G N DP V ADG + + AS GV + CP
Sbjct: 233 GTNNVDPAVCVQAADGGTWEAASTFATGVTAANLGKLAKSCP 274
>M.Javanica_Scaff10427g058767 on XP_804895 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 787
Score = 25.0 bits (53), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 147 IGLNRAAIELSYDPTVVQTWADGSS-VDYASVPTPGYXPTVVQTWADGSSVD 197
I L+R ELS +V+ TWA + ++PT G + ++G+ +D
Sbjct: 458 ISLSRLTGELSTIKSVLSTWAKKDAFFSKLAIPTAGLVAVLSDAASNGTWID 509
>M.Javanica_Scaff10427g058767 on XP_829762 VSG (Establishment) [Trypanosoma brucei]
Length = 503
Score = 24.6 bits (52), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 11/71 (15%)
Query: 149 LNRAAIELSYDPTVVQTWADGSSVDYASVPTPGYXPTVVQTWADGSSVDYASVPTPGVLN 208
+ +A +E + + ADG T GY VQT DG+S + V PG+
Sbjct: 277 ITKAELEAALNNLQALIHADG---------TNGYLGAYVQTGCDGTSPNGICVQFPGIAA 327
Query: 209 YDPTVV--QTW 217
+P V TW
Sbjct: 328 TNPDVATKTTW 338
>M.Javanica_Scaff10427g058767 on XP_808957 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1446
Score = 25.0 bits (53), Expect = 7.8, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 40/101 (39%), Gaps = 21/101 (20%)
Query: 176 SVPTPGYXPTVVQTWADGSSVDYA----------SVPTPGVLNYDPTVVQTWADGSSVDY 225
++P P P V A SSV+ A +VP+P T D ++++
Sbjct: 690 TIPPPERKP-VPAAAATSSSVEPANERVTTNTQPTVPSPATAGPQQT------DQTTLNA 742
Query: 226 ASVPTPGVPTTQIQPWG----PGCPSGLNDTGSNPQKGSPE 262
+SVP+ G P+ +P P P + P+ P+
Sbjct: 743 SSVPSGGAPSKPAEPKSAEPEPAEPKSAGPKPAEPKSAEPK 783
>M.Javanica_Scaff10427g058767 on XP_820186 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1133
Score = 24.6 bits (52), Expect = 8.3, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 221 SSVDYASVPTPGVPTTQIQPWGPGCPSGLNDTGSNPQKGSPE 262
++++ +SVP+ G P+T +P G P + P+ P+
Sbjct: 738 ATLNTSSVPSGGAPSTPAEPKSAG-PKPAEPKSAGPKPAEPK 778
>M.Javanica_Scaff10427g058767 on XP_810932 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 753
Score = 24.6 bits (52), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 146 YIGLNRAAIELSYDPTVVQTWADGSSVDYA-SVPTPGYXPTVVQTWADG 193
+I L+R ELS +V+ TWA + S+PT G + +DG
Sbjct: 458 FISLSRLTDELSTINSVLSTWAQKDIFFSSFSIPTAGLVAVLSDAASDG 506
>M.Javanica_Scaff10427g058767 on XP_820183 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 721
Score = 24.6 bits (52), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 142 FRSFYIGLNRAAIELSYDPTVVQTWADGSS-VDYASVPTPGYXPTVVQTWADGSSVD 197
+ + I L+R ELS +V+ TWA + S+PT G +V +D +S D
Sbjct: 455 YENSVISLSRLTEELSTIESVLSTWAKKDAFFSSLSIPTAG----LVAVLSDAASGD 507
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10331g058449
(121 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351319 PfEMP1 (Establishment) [Plasmodium falciparum] 24 3.6
>M.Javanica_Scaff10331g058449 on XP_001351319 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2646
Score = 23.9 bits (50), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 83 HPCDKACESNQNILNTE 99
HPC+KAC+ +N + T+
Sbjct: 1123 HPCNKACDEYKNYVETK 1139
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10363g058541
(51 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1050g012325
(94 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_845638 VSG (Establishment) [Trypanosoma brucei] 28 0.059
XP_001609033 variant erythrocyte surface antigen-1, alpha subun... 23 4.9
XP_001609314 variant erythrocyte surface antigen-1, beta subuni... 22 8.6
XP_001611736 variant erythrocyte surface antigen-1, alpha subun... 22 10.0
>M.Javanica_Scaff1050g012325 on XP_845638 VSG (Establishment) [Trypanosoma brucei]
Length = 510
Score = 28.1 bits (61), Expect = 0.059, Method: Composition-based stats.
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 65 AEGSCPGEKCGKKTALCNVCTGNN 88
AE CPG K G + A C V T N
Sbjct: 194 AENKCPGAKGGNRAADCKVATAGN 217
>M.Javanica_Scaff1050g012325 on XP_001609033 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1270
Score = 22.7 bits (47), Expect = 4.9, Method: Composition-based stats.
Identities = 9/23 (39%), Positives = 10/23 (43%)
Query: 52 RCDGVIHSRDCGNAEGSCPGEKC 74
RC C A G PGE+C
Sbjct: 125 RCKDEKQKTPCSCASGCSPGEEC 147
>M.Javanica_Scaff1050g012325 on XP_001609314 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1115
Score = 21.9 bits (45), Expect = 8.6, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 7/50 (14%)
Query: 30 CMSGDIKTFSPIVCTVSTCLTLRCDGVIHSRDCGNAEGSCPGEKCGKKTA 79
C+ GD T S + +CD ++ C N S EKCGK T
Sbjct: 147 CLKGDKSTRE------SKGMGRKCD-CTGAQCCTNGGASYECEKCGKGTG 189
>M.Javanica_Scaff1050g012325 on XP_001611736 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1365
Score = 21.9 bits (45), Expect = 10.0, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 12/28 (42%)
Query: 62 CGNAEGSCPGEKCGKKTALCNVCTGNNC 89
CG + PG +C K T N N C
Sbjct: 159 CGTGDTHNPGIECCKGTNYKNGVCANGC 186
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10605g059307
(328 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609101 variant erythrocyte surface antigen-1, alpha subun... 27 2.0
XP_001609163 variant erythrocyte surface antigen-1, alpha subun... 27 2.0
XP_001349434 PfEMP1 (Establishment) [Plasmodium falciparum] 27 2.5
XP_820140 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 8.7
>M.Javanica_Scaff10605g059307 on XP_001609101 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1359
Score = 26.9 bits (58), Expect = 2.0, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 36/76 (47%)
Query: 20 NSSKDEEIVTSSTISSDKINPVNGHESKEDEVFDGECPVININKNIQKQSTTDWCPIQCL 79
++++ ++ + S+T ++D + V H++K+ D +++ +++ T CP
Sbjct: 827 DTTEFQDAIFSATYTADVVTEVEKHQAKQKVTLDALSTLVSAIEDLLSICNTPKCPGCTK 886
Query: 80 NDLDCSELPNSRCCPS 95
+ C + P C +
Sbjct: 887 HSDKCGQPPKPTVCQT 902
>M.Javanica_Scaff10605g059307 on XP_001609163 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1360
Score = 26.9 bits (58), Expect = 2.0, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 36/76 (47%)
Query: 20 NSSKDEEIVTSSTISSDKINPVNGHESKEDEVFDGECPVININKNIQKQSTTDWCPIQCL 79
++++ ++ + S+T ++D + V H++K+ D +++ +++ T CP
Sbjct: 827 DTTEFQDAIFSATYTADVVTEVEKHQAKQKVTLDALSTLVSAIEDLLSICNTPKCPGCTK 886
Query: 80 NDLDCSELPNSRCCPS 95
+ C + P C +
Sbjct: 887 HSDKCGQPPKPTVCQT 902
>M.Javanica_Scaff10605g059307 on XP_001349434 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2109
Score = 26.6 bits (57), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 28/77 (36%), Gaps = 22/77 (28%)
Query: 93 CPSECGGWKCISSNKLISSPR-------PP---------------VQIQPLKNNLYIQKL 130
P+ GWKCI R PP + I P + LYIQKL
Sbjct: 822 TPNRYWGWKCIGDKTATGEARAGRVARSPPETAPSSAKSGEPTGSICIPPRRRRLYIQKL 881
Query: 131 NEERTNEKEEIKKGEEE 147
+E + +E K + +
Sbjct: 882 HEWASRGGDEATKSQSQ 898
>M.Javanica_Scaff10605g059307 on XP_820140 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 875
Score = 24.6 bits (52), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 45 ESKEDEVFDGECPVININKNIQKQSTTDWCPIQCLNDLDCSE 86
ES + D E V ++ IQ + TT+W + ++D CS+
Sbjct: 258 ESTKKAAEDAEEDVKTVSLIIQSKDTTNWTLSKGMSDGGCSD 299
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10584g059246
(223 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAQ63567 MAHRP1 (Others) [Plasmodium falciparum] 31 0.035
XP_812154 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.8
XP_001609666 variant erythrocyte surface antigen-1, alpha subun... 25 5.9
XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum] 24 8.0
>M.Javanica_Scaff10584g059246 on AAQ63567 MAHRP1 (Others) [Plasmodium falciparum]
Length = 338
Score = 31.2 bits (69), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 26/48 (54%)
Query: 151 ETVATAATNVKDATVNLANAAGQKVKGTAEVVSEDISEAAKETGNVVG 198
E V+ AATNV DA + A+ G V A + + EAA GN+VG
Sbjct: 34 EVVSDAATNVTDAVSDTASGIGSLVGEAASSLGNLVGEAASGIGNIVG 81
Score = 30.0 bits (66), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 14/100 (14%)
Query: 99 TEKAAAVRDSIAGAASNAGQAVANAAVGAKDKVVAGAKVVGETAVNAGKVAGETVATAAT 158
TEK A V ++ AA+N AV++ A G +VGE A + G + GE AA+
Sbjct: 29 TEKLAEV---VSDAATNVTDAVSDTASGI-------GSLVGEAASSLGNLVGE----AAS 74
Query: 159 NVKDATVNLANAAGQKVKGTAEVVSEDISEAAKETGNVVG 198
+ + A+ G V G A + + +AA GN+VG
Sbjct: 75 GIGNIVGGAASGIGNIVGGAASGIGSLVGDAASGLGNLVG 114
>M.Javanica_Scaff10584g059246 on XP_812154 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 175
Score = 24.6 bits (52), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 27/56 (48%)
Query: 21 FLLIISTVHTAPTTKEDQLIKSGSEKAKNGLENLGKGIENIADGARDTTIGAAEKF 76
F I S + T TTKE + + ++K LE + D +R TT+G E+F
Sbjct: 119 FTGIASQILTKKTTKEPEEVLKDAKKDIQVLEKDASQGKKKVDVSRPTTVGREERF 174
>M.Javanica_Scaff10584g059246 on XP_001609666 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1269
Score = 24.6 bits (52), Expect = 5.9, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 67/161 (41%), Gaps = 18/161 (11%)
Query: 44 SEKAKNGLENLGKGIENIADGARDTTIGAAEKFGQKAADVRESAKLRAKEAGDSFTEKAA 103
+EK K+ LE +G+ + + + A E K DV E K ++A +
Sbjct: 607 AEKLKDVLEKIGEVVVQLGN--------AQEALETKDKDVIEKVKEALRKAKEGLETAKN 658
Query: 104 AVRDSIAGAASNAGQAVANAAVGAKDKVVAGAKVVGETAVNAGKVAGETVATAATN-VKD 162
++D + A + G +VV G+ + + A N G+ +AA V+D
Sbjct: 659 GLKDKLEEAKKKLDELTNGGGSGILGEVVGGSGL--DKANNGEYDPGKNKLSAAIKGVRD 716
Query: 163 ATVNLANAAGQKVKGTAEVVSEDISEAAKETGNVVGKGLEN 203
L KG E+ ++I EA + G+++G +E+
Sbjct: 717 VLEGLR-------KGVIEIKKKEIEEANQVLGDIIGVVIED 750
>M.Javanica_Scaff10584g059246 on XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2994
Score = 24.3 bits (51), Expect = 8.0, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 169 NAAGQKVKGTAEVVSEDISEAAKETGNVVGKGLENA 204
N+A ++G A+ + D+S AK G V+ L +A
Sbjct: 19 NSARNVLEGFAKDIKRDVSNNAKRHGKVLKGNLRDA 54
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10476g058903
(55 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001611901 variant erythrocyte surface antigen-1, alpha subun... 23 1.4
XP_001349032 PfEMP1 (Establishment) [Plasmodium falciparum] 23 1.6
XP_820142 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.7
XP_001347691 PfEMP1 (Establishment) [Plasmodium falciparum] 22 1.9
XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum] 22 2.1
XP_001349438 PfEMP1 (Establishment) [Plasmodium falciparum] 22 2.3
XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum] 22 3.3
XP_001351877 PfEMP1 (Establishment) [Plasmodium falciparum] 22 3.7
XP_628559 gp900 (Adhesin) [Cryptosporidium parvum] 22 4.4
XP_001349434 PfEMP1 (Establishment) [Plasmodium falciparum] 20 9.7
>M.Javanica_Scaff10476g058903 on XP_001611901 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1211
Score = 22.7 bits (47), Expect = 1.4, Method: Composition-based stats.
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 23 SSTASTVSNNPQQPRDV 39
SST ST NP+ RD+
Sbjct: 465 SSTQSTAPRNPKTIRDI 481
>M.Javanica_Scaff10476g058903 on XP_001349032 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2267
Score = 22.7 bits (47), Expect = 1.6, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
Query: 2 TFSYSTPSNIPTQKLSTTPMNSSTASTVSNNPQQPRDVNWG 42
T S + S+IP+ KLS TP +++ S + P D+ G
Sbjct: 2118 THSGNKHSDIPSGKLSDTPSDNNIHSDI-----HPSDIPSG 2153
>M.Javanica_Scaff10476g058903 on XP_820142 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 861
Score = 22.7 bits (47), Expect = 1.7, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 15/20 (75%)
Query: 12 PTQKLSTTPMNSSTASTVSN 31
PT+ L ++ +N +ASTVS+
Sbjct: 738 PTESLGSSGVNGVSASTVSS 757
>M.Javanica_Scaff10476g058903 on XP_001347691 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2182
Score = 22.3 bits (46), Expect = 1.9, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 6 STPSNIPTQKLSTTPMNSSTASTVSNNPQQP 36
+T +++ Q TP+ S++AST S + + P
Sbjct: 964 NTAASVSPQVRGETPLASTSASTPSGSHRDP 994
>M.Javanica_Scaff10476g058903 on XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2178
Score = 22.3 bits (46), Expect = 2.1, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 8 PSNIPTQKLSTTPMNSSTAST 28
PS+IP+ KLS P +++ S+
Sbjct: 2042 PSDIPSGKLSDIPSDNNIPSS 2062
Score = 21.2 bits (43), Expect = 4.9, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 5/34 (14%)
Query: 9 SNIPTQKLSTTPMNSSTASTVSNNPQQPRDVNWG 42
S+IP+ KLS TP +++ S + P D+ G
Sbjct: 2020 SDIPSGKLSDTPSDNNIHSDI-----HPSDIPSG 2048
>M.Javanica_Scaff10476g058903 on XP_001349438 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2265
Score = 22.3 bits (46), Expect = 2.3, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
Query: 2 TFSYSTPSNIPTQKLSTTPMNSSTASTVSNNPQQPRDVNWG 42
T S + S+IP+ KLS TP +++ S + P D+ G
Sbjct: 2101 THSGNKHSDIPSGKLSDTPSDNNIHSDI-----HPSDIPSG 2136
>M.Javanica_Scaff10476g058903 on XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1711
Score = 21.9 bits (45), Expect = 3.3, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
Query: 4 SYSTP--SNIPTQKLSTTPMNSSTAST 28
S +TP S+IP+ KLS TP +++ S+
Sbjct: 1592 SGNTPPTSDIPSGKLSDTPSDNNIPSS 1618
>M.Javanica_Scaff10476g058903 on XP_001351877 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2270
Score = 21.6 bits (44), Expect = 3.7, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
Query: 2 TFSYSTPSNIPTQKLSTTPMNSSTASTVSNNPQQPRDVNWG 42
T S S IP+ KLS TP +++ S + P D+ G
Sbjct: 2127 THSGDINSGIPSGKLSDTPSDNNIHSDI-----HPSDIPSG 2162
>M.Javanica_Scaff10476g058903 on XP_628559 gp900 (Adhesin) [Cryptosporidium parvum]
Length = 1937
Score = 21.6 bits (44), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Query: 20 PMNSSTASTVSNNPQQP--RDVNWGFF 44
P+N+STA VS P P D N F
Sbjct: 1290 PINNSTAGIVSGKPGLPPIEDENGNLF 1316
>M.Javanica_Scaff10476g058903 on XP_001349434 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2109
Score = 20.4 bits (41), Expect = 9.7, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 15/34 (44%)
Query: 8 PSNIPTQKLSTTPMNSSTASTVSNNPQQPRDVNW 41
P+ QK ++TP + PQQP D W
Sbjct: 1630 PAPAGDQKEASTPKVAPRPKPPRVKPQQPGDDPW 1663
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10426g058762
(103 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_809580 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.1
XP_812152 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.4
XP_001350415 PfEMP1 (Establishment) [Plasmodium falciparum] 23 3.6
>M.Javanica_Scaff10426g058762 on XP_809580 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 776
Score = 24.3 bits (51), Expect = 2.1, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 53 FVLKVIEKKNNQHDGLTKNIEGFLRSIDLNIN 84
F+ V +K DG TK + L S D N N
Sbjct: 271 FLFPVEARKKQNEDGNTKTVSLILYSKDTNTN 302
Score = 22.7 bits (47), Expect = 5.6, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 62 NNQHDGLTKNIEGFLRSIDLNINKNMFEVEIRVNQN 97
+++H LT+ I G I N +F VE R QN
Sbjct: 247 DDEHKCLTQLIGGGGSGIKTNDGTFLFPVEARKKQN 282
>M.Javanica_Scaff10426g058762 on XP_812152 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 923
Score = 23.5 bits (49), Expect = 3.4, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 61 KNNQHDGLTKNIEGFLRSIDLNINKNMFEVE 91
K QH+ LTK I G + +N + +F VE
Sbjct: 247 KGKQHESLTKLIGGGGSGVKMNDDTLVFPVE 277
>M.Javanica_Scaff10426g058762 on XP_001350415 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3056
Score = 23.5 bits (49), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 16 LKIQCAGKLIHVEVKIKDDRKEKREFIYLKNVEIKDRFVLKVIEK-KNNQHDGLTKNI 72
K +C G+ + KD+ + K + L + E+K+ + K NN D L K I
Sbjct: 2594 FKDKCNGECSCLSEYFKDETRWKNPYETLDDTEVKNNCMCKPPPPASNNTSDILQKTI 2651
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10471g058890
(203 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_818344 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.64
XP_821714 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.2
>M.Javanica_Scaff10471g058890 on XP_818344 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 928
Score = 27.3 bits (59), Expect = 0.64, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Query: 50 QSWAATIGTDVKQWIEINYKNKKPHRIG-IPKTTQLTPNGLSFFLKL--VLSNKEKSRKR 106
+SW +GT + W+ + KN K R G I T N + L V S K++S+K
Sbjct: 330 ESWTEALGTLSRVWVNKHEKNVKRARSGFITATIDGDENNRNVMLVTLPVYSEKDESKKE 389
Query: 107 RDVL 110
VL
Sbjct: 390 TGVL 393
>M.Javanica_Scaff10471g058890 on XP_821714 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 827
Score = 26.6 bits (57), Expect = 1.2, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 13/64 (20%)
Query: 51 SWAATIGTDVKQWIEINYKNKKPHRIGIPKTTQLTPNGLSFFLKLVLSNKEKSRKRRDVL 110
SW +GT + W + KN KP R G F +L + E K+R V+
Sbjct: 327 SWTEALGTLSRVWGNEHDKNVKPVRSG-------------FITATILVDGEDDNKKRTVM 373
Query: 111 IHNL 114
+ L
Sbjct: 374 LVTL 377
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1058g012405
(160 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_808201 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 9.5
XP_804289 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 9.7
>M.Javanica_Scaff1058g012405 on XP_808201 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1044
Score = 23.1 bits (48), Expect = 9.5, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 6 GELFALILVHCNSAMDLLEIG 26
G LFA+ HC D E+G
Sbjct: 110 GHLFAIAEAHCRDGGDCSEVG 130
>M.Javanica_Scaff1058g012405 on XP_804289 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1048
Score = 23.1 bits (48), Expect = 9.7, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 6 GELFALILVHCNSAMDLLEIG 26
G LFA+ HC D E+G
Sbjct: 109 GHLFAIAEAHCRDGGDCSEVG 129
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1057g012394
(86 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001610196 variant erythrocyte surface antigen-1, alpha subun... 25 0.61
ABR19836 gp82 (Adhesin) [Trypanosoma cruzi] 23 1.7
XP_816750 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.0
XP_812751 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.2
XP_001609033 variant erythrocyte surface antigen-1, alpha subun... 23 3.4
XP_808213 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.6
XP_811467 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.0
XP_802237 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.6
XP_810953 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.7
XP_001611736 variant erythrocyte surface antigen-1, alpha subun... 22 5.1
XP_807474 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.3
XP_817721 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 6.9
XP_001350798 PfEMP1 (Establishment) [Plasmodium falciparum] 22 7.9
XP_821388 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 9.2
>M.Javanica_Scaff1057g012394 on XP_001610196 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1330
Score = 25.0 bits (53), Expect = 0.61, Method: Composition-based stats.
Identities = 13/22 (59%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Query: 53 PQANALEEIQRKHAQGRLKEIL 74
P + A EI KHA+GRLKE+L
Sbjct: 493 PYSLAYPEIL-KHAKGRLKEVL 513
>M.Javanica_Scaff1057g012394 on ABR19836 gp82 (Adhesin) [Trypanosoma cruzi]
Length = 70
Score = 23.1 bits (48), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 6 IFLFSICLLLELIECADKEKGIVGKESTGK 35
+F +I LLL C D V KE+ GK
Sbjct: 5 VFDSTILLLLVTTMCCDTCGATVAKENDGK 34
>M.Javanica_Scaff1057g012394 on XP_816750 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 736
Score = 23.5 bits (49), Expect = 2.0, Method: Composition-based stats.
Identities = 9/16 (56%), Positives = 10/16 (62%)
Query: 39 SSRFGRGRGGRDGRPQ 54
S GRGR GR+ PQ
Sbjct: 20 SGSSGRGREGRESEPQ 35
>M.Javanica_Scaff1057g012394 on XP_812751 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 952
Score = 23.5 bits (49), Expect = 2.2, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 26 GIVGKESTGKGGTSSRFGRGRGGRDGRPQ 54
+V + + G + GR R GR+ PQ
Sbjct: 7 AVVAPRTHNRRGVTGSSGRRREGRESEPQ 35
>M.Javanica_Scaff1057g012394 on XP_001609033 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1270
Score = 23.1 bits (48), Expect = 3.4, Method: Composition-based stats.
Identities = 8/12 (66%), Positives = 11/12 (91%)
Query: 65 HAQGRLKEILLN 76
H++GRLKE+L N
Sbjct: 446 HSKGRLKEVLKN 457
>M.Javanica_Scaff1057g012394 on XP_808213 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 819
Score = 23.1 bits (48), Expect = 3.6, Method: Composition-based stats.
Identities = 8/12 (66%), Positives = 9/12 (75%)
Query: 43 GRGRGGRDGRPQ 54
GRGR GR+ PQ
Sbjct: 24 GRGREGRESEPQ 35
>M.Javanica_Scaff1057g012394 on XP_811467 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 300
Score = 22.7 bits (47), Expect = 4.0, Method: Composition-based stats.
Identities = 8/12 (66%), Positives = 9/12 (75%)
Query: 43 GRGRGGRDGRPQ 54
GR RGGR+ PQ
Sbjct: 83 GRMRGGRESEPQ 94
>M.Javanica_Scaff1057g012394 on XP_802237 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 364
Score = 22.7 bits (47), Expect = 4.6, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 6/66 (9%)
Query: 6 IFLFSICLLLELIECADKEKGIVGKESTGKGGTSSRFGRGRG---GRDGRPQANALEEIQ 62
+ L+S C + +K + ES+G GT S G+ G G D A ++
Sbjct: 235 VLLYSRCFNDSEVAALEKRED---SESSGAAGTDSAKGKATGSSAGEDSESSGAAGTDLA 291
Query: 63 RKHAQG 68
+ A G
Sbjct: 292 KGKATG 297
>M.Javanica_Scaff1057g012394 on XP_810953 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 958
Score = 22.7 bits (47), Expect = 4.7, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 26 GIVGKESTGKGGTSSRFGRGRGGRDGRPQANALEEIQRKHAQG 68
G G+ + GGT + G RDG +A AL +QG
Sbjct: 888 GHYGENAAMVGGTDGQKGEDIHARDGEVKAAALNSSLGNLSQG 930
>M.Javanica_Scaff1057g012394 on XP_001611736 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1365
Score = 22.3 bits (46), Expect = 5.1, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 24 EKGIVGKESTGKGGTSSRFGRG 45
EK + + KGG+SS GRG
Sbjct: 201 EKNLCNECECIKGGSSSHLGRG 222
>M.Javanica_Scaff1057g012394 on XP_807474 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 266
Score = 22.3 bits (46), Expect = 5.3, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 1 MSKFVIFLFSICLLLELIECADKEKGIVGKES-TGKGGTSSRFGRGRGGRDG 51
MS+ V ++ LL+ ++ C GKES +GKG + ++ R +DG
Sbjct: 39 MSRRVFASAALLLLVMMMFCGSGAAS-AGKESRSGKGSETEKYFDWRDTKDG 89
>M.Javanica_Scaff1057g012394 on XP_817721 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 922
Score = 21.9 bits (45), Expect = 6.9, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 32 STGKGGTSSRFGRGRGGRDGRPQANA 57
+TG +S G GGRDG+ A++
Sbjct: 849 TTGAHVSSGESGETVGGRDGQEDAHS 874
>M.Javanica_Scaff1057g012394 on XP_001350798 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2359
Score = 21.9 bits (45), Expect = 7.9, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 29 GKESTGKGGTSSRFGRGRGG 48
GK+ TGK S RF + G
Sbjct: 82 GKDGTGKEDDSKRFSKESGA 101
>M.Javanica_Scaff1057g012394 on XP_821388 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 907
Score = 21.6 bits (44), Expect = 9.2, Method: Composition-based stats.
Identities = 10/45 (22%), Positives = 22/45 (48%)
Query: 6 IFLFSICLLLELIECADKEKGIVGKESTGKGGTSSRFGRGRGGRD 50
+F ++ LLL ++ C + ++ +GKG + ++ R D
Sbjct: 43 VFTSAVPLLLVVMMCCGSGAAVPEEKPSGKGSEAEKYFAWRNKND 87
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1038g012228
(191 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAB37326 PfSUB2 (Proteases) [Plasmodium falciparum] 25 4.7
>M.Javanica_Scaff1038g012228 on CAB37326 PfSUB2 (Proteases) [Plasmodium falciparum]
Length = 1342
Score = 24.6 bits (52), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 11/74 (14%)
Query: 70 INIKQSEFAFLKALLILQPDIVGISENSKNIISQAKEDLINAI---------ISYDNCNN 120
+N+K + + + +L+L+ ++ S+N KN+I+ AK++L ISYD
Sbjct: 546 LNLKNNHTSKQELILVLKGELDLHSKNMKNVINNAKKNLEKYFKEHFKEFDKISYDIS-- 603
Query: 121 TRLFQLLLFLPSLF 134
T + L +F+P+LF
Sbjct: 604 TPINFLCIFIPTLF 617
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10599g059292
(89 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_845141 VSG (Establishment) [Trypanosoma brucei] 24 1.8
XP_843647 VSG (Establishment) [Trypanosoma brucei] 23 4.8
>M.Javanica_Scaff10599g059292 on XP_845141 VSG (Establishment) [Trypanosoma brucei]
Length = 486
Score = 23.9 bits (50), Expect = 1.8, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 37 LGQTNTDRQNTHETRTTGMKMRKKYLKINP 66
L T+TD T + T G + R K +K P
Sbjct: 144 LADTDTDEDKTADIATAGCEQRPKTMKKTP 173
>M.Javanica_Scaff10599g059292 on XP_843647 VSG (Establishment) [Trypanosoma brucei]
Length = 543
Score = 22.7 bits (47), Expect = 4.8, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 33 KTDGLGQTNTDRQNTHETRTTG 54
K DG + NTD++ ++ET + G
Sbjct: 438 KLDGEQKCNTDKKCSYETASDG 459
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10611g059327
(50 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001608665 variant erythrocyte surface antigen-1, alpha subun... 22 3.5
>M.Javanica_Scaff10611g059327 on XP_001608665 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1326
Score = 21.6 bits (44), Expect = 3.5, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 10 SLVLNDSSHRAKKIATKIHK 29
S V+ND + KK+ IHK
Sbjct: 237 SCVVNDKNDDTKKLERHIHK 256
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10504g058990
(106 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum] 25 1.7
XP_829763 VSG (Establishment) [Trypanosoma brucei] 23 4.0
XP_654447 Igl1 (Adhesin) [Entamoeba histolytica] 23 7.4
>M.Javanica_Scaff10504g058990 on XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2858
Score = 24.6 bits (52), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 2 NLKFIFVACLAAAIFTENNYALRCYNKINKIEE 34
+L+ F+ C AA F Y + +K+NK++E
Sbjct: 1317 DLRKAFIKCAAAETFFSWYYFKKINDKLNKLDE 1349
>M.Javanica_Scaff10504g058990 on XP_829763 VSG (Establishment) [Trypanosoma brucei]
Length = 476
Score = 23.5 bits (49), Expect = 4.0, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Query: 31 KIEECDGKQPMC-LSMKCGKHIVAKCCIPDLNHLCNYNK--TACK-HECDKLVG 80
K EE G + + L+ G ++V + P CN+NK T C E DK G
Sbjct: 369 KAEEISGIEDLGKLAATLGHYLVQETTKPSSKEQCNFNKEETGCDGKEQDKCNG 422
>M.Javanica_Scaff10504g058990 on XP_654447 Igl1 (Adhesin) [Entamoeba histolytica]
Length = 1101
Score = 22.7 bits (47), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 63 LCNYNKTACKHECDKLVGLNFEDPKRPKPPCP 94
C YN T+ K EC +D K P+ CP
Sbjct: 733 TCKYNTTSKKVECVTCTEQRLKDIKAPECACP 764
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1060g012438
(71 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1061g012448
(226 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAA29462 ABRA (Others) [Plasmodium falciparum] 30 0.15
XP_822021 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.6
XP_001351435 PfEMP1 (Establishment) [Plasmodium falciparum] 26 2.1
XP_810068 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.4
>M.Javanica_Scaff1061g012448 on AAA29462 ABRA (Others) [Plasmodium falciparum]
Length = 743
Score = 29.6 bits (65), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 20/27 (74%)
Query: 1 MKLVLIFLILNSIFWSLINSVKNNKNQ 27
MK+VL L+L I W++I+ KN+KNQ
Sbjct: 4 MKIVLFSLLLFVIRWNIISCNKNDKNQ 30
>M.Javanica_Scaff1061g012448 on XP_822021 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 872
Score = 26.6 bits (57), Expect = 1.6, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 22/35 (62%)
Query: 34 EENVAGSSTHHPNQEDEETLNSEYENTKEDKLKPT 68
E++VA SS + + ++ E L + YE K+D KP+
Sbjct: 409 EDDVAASSLLYKSGDNNEELIALYEKKKDDAEKPS 443
>M.Javanica_Scaff1061g012448 on XP_001351435 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2209
Score = 26.2 bits (56), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 31 GRGEENVAGSSTHHPNQEDEETLNSEYENTKEDKLKP-TRYNKDYYENNKEMLQMQEYRR 89
G+G+ N + H +QED++TL++ ENT+ P T + + ++ ++
Sbjct: 869 GKGDANEEEAENHSNDQEDKDTLDAVVENTEVGPSGPATPVDDKVCDIVSKLFSGNDFGD 928
Query: 90 NYYKNNKEYAREYYQNYQKV 109
+Y RE + N++ +
Sbjct: 929 ACGTKYDKYGREKFPNWKCI 948
Score = 25.8 bits (55), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 12/104 (11%)
Query: 68 TRYNKDYYENNKEMLQ--MQEYRRNYYKNNKEYAREYYQNYQKVKKEKVRECKKKYYETN 125
TRY Y E+ K L ++ Y +Y R +Y+ + KK + + +K Y +
Sbjct: 1246 TRYGSGYGEDCKNNLPENPSTFKDLEYPTCAKYCR-FYKKWINTKKTEYEKQEKIYVQQK 1304
Query: 126 KDKLIEKMRKY--------RQRKKNEKKLGSKLRNIRADNGEGT 161
KD + KY +Q E L KL + DNGEGT
Sbjct: 1305 KDATSDNGNKYDSNCDGKLKQYASIESFL-EKLVQCKKDNGEGT 1347
>M.Javanica_Scaff1061g012448 on XP_810068 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1147
Score = 25.8 bits (55), Expect = 2.4, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 30 IGRGEENVAGSSTH-HPNQEDEETLNSEYENTKED 63
I RG+++ A SS ++++E L S YEN K+D
Sbjct: 509 ISRGDDDAAASSLLVKSGKDNKEELISLYENKKDD 543
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10615g059337
(159 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351318 PfEMP1 (Establishment) [Plasmodium falciparum] 27 0.70
XP_803347 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.5
>M.Javanica_Scaff10615g059337 on XP_001351318 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2169
Score = 26.9 bits (58), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 30/51 (58%)
Query: 107 YKKSNNKKEDTIRRSLTKSNSENNILNNTDQSTGQDSNLRPPAFARYMQEL 157
Y+K K+ED+ +++ T S + + + ++ T DS ++ P + RY++E
Sbjct: 1155 YEKVEIKEEDSGQKASTASQTPSPRASGENKPTTLDSFVKRPTYFRYLEEW 1205
>M.Javanica_Scaff10615g059337 on XP_803347 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 688
Score = 23.9 bits (50), Expect = 5.5, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 28 RRVCQDDKYLLNIEETEYNIPSIAIECEEAIFENQIENLYLIT 70
R V ++ + IE E + + I C+E N NL LIT
Sbjct: 124 RSVVLSMRFNMRIEACELSSGTTGINCKEPSIANLEGNLILIT 166
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10532g059082
(101 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_844687 VSG (Establishment) [Trypanosoma brucei] 30 0.017
XP_844688 VSG (Establishment) [Trypanosoma brucei] 30 0.017
XP_803420 VSG (Establishment) [Trypanosoma brucei] 29 0.039
XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum] 27 0.18
XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum] 23 3.5
XP_001349735 PfEMP1 (Establishment) [Plasmodium falciparum] 22 7.8
>M.Javanica_Scaff10532g059082 on XP_844687 VSG (Establishment) [Trypanosoma brucei]
Length = 508
Score = 30.0 bits (66), Expect = 0.017, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 7/84 (8%)
Query: 15 FPSFWESGSGLA-------ISLIHTVQGDLSNITLDYFKLQYKSEGYTPMYRELNVPPSY 67
F SF + +G A + L GD N T D+ K+ +
Sbjct: 327 FKSFVHAATGKAPSDGEIELQLKSLYGGDKQNFTRDFVKILWTKNVTYHTGAGFKTETLL 386
Query: 68 NFVRNCRIRGALVYFDEARPAESN 91
+ VRN + AL+Y ++ RPAE +
Sbjct: 387 DAVRNKNAQRALIYLEDQRPAEES 410
>M.Javanica_Scaff10532g059082 on XP_844688 VSG (Establishment) [Trypanosoma brucei]
Length = 508
Score = 30.0 bits (66), Expect = 0.017, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 7/84 (8%)
Query: 15 FPSFWESGSGLA-------ISLIHTVQGDLSNITLDYFKLQYKSEGYTPMYRELNVPPSY 67
F SF + +G A + L GD N T D+ K+ +
Sbjct: 327 FKSFVHAATGKAPSDGEIELQLKSLYGGDKQNFTRDFVKILWTKNVTYHTGAGFKTETLL 386
Query: 68 NFVRNCRIRGALVYFDEARPAESN 91
+ VRN + AL+Y ++ RPAE +
Sbjct: 387 DAVRNKNAQRALIYLEDQRPAEES 410
>M.Javanica_Scaff10532g059082 on XP_803420 VSG (Establishment) [Trypanosoma brucei]
Length = 526
Score = 28.9 bits (63), Expect = 0.039, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 29/69 (42%)
Query: 21 SGSGLAISLIHTVQGDLSNITLDYFKLQYKSEGYTPMYRELNVPPSYNFVRNCRIRGALV 80
+GS + L GD N T D+ K+ + + + VRN + AL+
Sbjct: 343 AGSSVEAQLQKLYGGDKQNFTRDFVKVLWTKNVTYHIGSGFVTETLLDAVRNKNAQKALI 402
Query: 81 YFDEARPAE 89
Y ++ RP E
Sbjct: 403 YLEDQRPTE 411
>M.Javanica_Scaff10532g059082 on XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1711
Score = 27.3 bits (59), Expect = 0.18, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 10 PKCREFPSFWESGSGLAISLIHTVQGDLSNITLDYFKLQYKSEGYTPMYRELNVPPS 66
PK R+FP+ + L+ +++ ++ + T YF L+ K++ + R +N+P S
Sbjct: 1232 PKERDFPTPALKNAMLSSTIMWSI--GIGFATFTYFYLKKKTKSTIDLLRVINIPKS 1286
>M.Javanica_Scaff10532g059082 on XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2994
Score = 23.5 bits (49), Expect = 3.5, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 42 LDYFKLQYKSEGYTPMYRELNVP 64
L YF L+ KS+ + R LN+P
Sbjct: 2566 LTYFLLKKKSKSSVDLLRVLNIP 2588
>M.Javanica_Scaff10532g059082 on XP_001349735 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 431
Score = 22.3 bits (46), Expect = 7.8, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 42 LDYFKLQYKSEGYTPMYRELNVP 64
L YF L+ KS+ + R LN+P
Sbjct: 18 LSYFLLKKKSKFSVDLLRVLNIP 40
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10424g058751
(539 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_807476 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 1.2
XP_806299 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.5
XP_843744 VSG (Establishment) [Trypanosoma brucei] 26 5.2
XP_843745 VSG (Establishment) [Trypanosoma brucei] 26 5.4
>M.Javanica_Scaff10424g058751 on XP_807476 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 856
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 9/65 (13%)
Query: 36 EDLKRFCQTMDAGKNNTRDPNLPEGGRDLPNDRQELRCVTLSCFCP------ALNGKKDG 89
ED++ QT+DA NT N GG +P+ + R + F ++ +D
Sbjct: 777 EDVEEVLQTVDAAPGNT---NTTPGGEGIPSTKGAARHSDNNTFTGEIAELLSMGLNRDS 833
Query: 90 TVNGC 94
TV+GC
Sbjct: 834 TVHGC 838
>M.Javanica_Scaff10424g058751 on XP_806299 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1047
Score = 27.3 bits (59), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 9/65 (13%)
Query: 36 EDLKRFCQTMDAGKNNTRDPNLPEGGRDLPNDRQELRCVTLSCFCP------ALNGKKDG 89
ED++ QT+DA NT N GG +P+ + R F ++ +D
Sbjct: 968 EDVEEVPQTVDAAPGNT---NTTPGGEGIPSTKGAARHSDNDTFTGEIAELLSMGLNRDS 1024
Query: 90 TVNGC 94
TV+GC
Sbjct: 1025 TVHGC 1029
>M.Javanica_Scaff10424g058751 on XP_843744 VSG (Establishment) [Trypanosoma brucei]
Length = 366
Score = 26.2 bits (56), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 10/14 (71%), Positives = 11/14 (78%)
Query: 157 LPWHRELLKVFELM 170
+PW RELLKVF M
Sbjct: 317 IPWMRELLKVFNEM 330
Score = 26.2 bits (56), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 10/14 (71%), Positives = 11/14 (78%)
Query: 245 LPWHRELLKVFELM 258
+PW RELLKVF M
Sbjct: 317 IPWMRELLKVFNEM 330
>M.Javanica_Scaff10424g058751 on XP_843745 VSG (Establishment) [Trypanosoma brucei]
Length = 366
Score = 26.2 bits (56), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 10/14 (71%), Positives = 11/14 (78%)
Query: 157 LPWHRELLKVFELM 170
+PW RELLKVF M
Sbjct: 317 IPWMRELLKVFNEM 330
Score = 26.2 bits (56), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 10/14 (71%), Positives = 11/14 (78%)
Query: 245 LPWHRELLKVFELM 258
+PW RELLKVF M
Sbjct: 317 IPWMRELLKVFNEM 330
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff103g001951
(64 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1061g012446
(322 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349207 EBA-175 (Adhesin) [Plasmodium falciparum] 26 4.4
XP_001349034 PfEMP1 (Establishment) [Plasmodium falciparum] 25 8.8
>M.Javanica_Scaff1061g012446 on XP_001349207 EBA-175 (Adhesin) [Plasmodium falciparum]
Length = 1462
Score = 25.8 bits (55), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 100 KEWISNKHKEYNQKNKEKIKEYNR-NYLRNYNKINKEKNREYYRKYQQ 146
KEWIS K +EYN++ K+ +EY + N + Y++ K Y +KY +
Sbjct: 670 KEWISKKKEEYNKQAKQ-YQEYQKGNNYKMYSEFKSIKPEVYLKKYSE 716
>M.Javanica_Scaff1061g012446 on XP_001349034 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 24.6 bits (52), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 100 KEWISNKHKEYNQKNKEKIKEYNRNYLRNYN 130
K WI+ K KE+ + K +++Y Y NYN
Sbjct: 1543 KAWINLKTKEWEEIKKPYLEQYKNGYGENYN 1573
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10504g058991
(57 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10383g058611
(124 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001352170 MSP1 (Invasion) [Plasmodium falciparum] 33 0.003
XP_001610714 variant erythrocyte surface antigen-1, alpha subun... 27 0.49
XP_001608668 variant erythrocyte surface antigen-1, alpha subun... 26 0.69
XP_001609040 variant erythrocyte surface antigen-1, alpha subun... 24 2.8
XP_829780 VSG (Establishment) [Trypanosoma brucei] 23 4.3
XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum] 23 4.7
XP_001608785 variant erythrocyte surface antigen-1, alpha subun... 23 6.9
XP_001351321 PfEMP1 (Establishment) [Plasmodium falciparum] 23 9.0
>M.Javanica_Scaff10383g058611 on XP_001352170 MSP1 (Invasion) [Plasmodium falciparum]
Length = 1720
Score = 33.1 bits (74), Expect = 0.003, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 12/61 (19%)
Query: 57 ARYQCLERQCRMDT-----CDKKYDNCCY------GMKCVDNGNCVLCYEDNKECDHDDD 105
+++QC+++QC ++ D++ + C G KCV+N N C E+N CD D
Sbjct: 1609 SQHQCVKKQCPENSGCFRHLDEREECKCLLNYKQEGDKCVENPNPT-CNENNGGCDADAT 1667
Query: 106 C 106
C
Sbjct: 1668 C 1668
>M.Javanica_Scaff10383g058611 on XP_001610714 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1231
Score = 26.6 bits (57), Expect = 0.49, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 4/32 (12%)
Query: 28 HHYGEGCNKDVKCCEGLDCTRTFASGSGRARY 59
HH G GC K CEG CT + S ++ Y
Sbjct: 163 HHLGRGCQK----CEGDKCTHSCYKKSYKSAY 190
>M.Javanica_Scaff10383g058611 on XP_001608668 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1337
Score = 26.2 bits (56), Expect = 0.69, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 12/64 (18%)
Query: 62 LERQCRMD-TCDKKYDNCCYGMKCVDNG----NCVLCYEDNKECDHDDDCCIGRCIKKEG 116
L +QC + TC K+ C YG V G C+ C +HD C R K +
Sbjct: 609 LRKQCEVKVTCGGKWRECRYGHGVVSKGVISWMCLGC----NPMEHDRKC---RVDKVKE 661
Query: 117 DLVG 120
DLVG
Sbjct: 662 DLVG 665
>M.Javanica_Scaff10383g058611 on XP_001609040 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1335
Score = 24.3 bits (51), Expect = 2.8, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 7/50 (14%)
Query: 28 HHYGEGCNKDVKCCEGLDCTRTFASGSGRARYQCLERQCRMDT---CDKK 74
HH G GC+K C+G C + A G + + + C + CD+K
Sbjct: 172 HHLGRGCDK----CDGDKCGKPGAGGGCQCQCKGGASGCTSASDCKCDRK 217
>M.Javanica_Scaff10383g058611 on XP_829780 VSG (Establishment) [Trypanosoma brucei]
Length = 494
Score = 23.5 bits (49), Expect = 4.3, Method: Composition-based stats.
Identities = 9/23 (39%), Positives = 15/23 (65%), Gaps = 4/23 (17%)
Query: 94 YEDNKECDHDDDCCIGRCIKKEG 116
Y+ +++C+H D G+C KEG
Sbjct: 445 YKKDEDCEHKD----GKCKLKEG 463
>M.Javanica_Scaff10383g058611 on XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2980
Score = 23.5 bits (49), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 11 FVFSTFLIFKFTNGQCIHHYG 31
F +++ FKF+N QC H+ G
Sbjct: 277 FEYNSGKFFKFSNDQCGHNNG 297
>M.Javanica_Scaff10383g058611 on XP_001608785 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 954
Score = 23.1 bits (48), Expect = 6.9, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 10/65 (15%)
Query: 62 LERQCRMD-TCDKKYDNCCYGMKCVDNG----NCVLCYEDNKECDHDDDCCIGRCIKKEG 116
L +QC + TC K+ C YG V G C+ C +HD C + + +K E
Sbjct: 596 LRKQCAVKVTCGGKWRECRYGQGVVSKGVISWMCLGC----NPMEHDRKCRVDK-VKGEL 650
Query: 117 DLVGK 121
+V K
Sbjct: 651 KIVPK 655
>M.Javanica_Scaff10383g058611 on XP_001351321 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3467
Score = 22.7 bits (47), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 51/135 (37%), Gaps = 19/135 (14%)
Query: 4 INIYCLIFVFSTFLIFKFTNG-----------QCIHHYGEGCNKDVK----CCEGLDCTR 48
+N Y VF + + F G QC + GE CN++ K C +G +
Sbjct: 2729 LNQYTTFKVFLEYWLQDFIEGYYILKKRKIIEQCKENGGETCNENSKNDCACVKGWVAQK 2788
Query: 49 TFASGSGRARYQCLERQCRMDTCDKKYD----NCCYGMKCVDNGNCVLCYEDNKECDHDD 104
T + Y E D K + N K +DN + + E+ + C++ D
Sbjct: 2789 TTEWNQIKDHYNKKEYGNGYDMSHKVKNYFEKNENELRKWIDNYDVLKNNEEYEVCNNGD 2848
Query: 105 DCCIGRCIKKEGDLV 119
C K++ D+V
Sbjct: 2849 KNCNFEGKKRKKDMV 2863
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff103g001950
(335 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum] 26 4.5
XP_802332 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 7.8
>M.Javanica_Scaff103g001950 on XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1711
Score = 25.8 bits (55), Expect = 4.5, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 19/36 (52%)
Query: 273 DWLINWRNFYEIDNQHKIRGRKLPPTTNNLNIKKPR 308
+WL NW++ Y+ NQ + P + ++K+ +
Sbjct: 1108 EWLTNWQDNYKKQNQRYTEVKGTSPYKEDSDVKESK 1143
>M.Javanica_Scaff103g001950 on XP_802332 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 186
Score = 24.6 bits (52), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
Query: 105 PISGLPIRQVRYEHAHRRG--ALYCQS-GTW 132
P +P+ V+ EH++RRG L C + G W
Sbjct: 26 PAGSVPLLGVKLEHSNRRGFIGLSCTAEGKW 56
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10383g058613
(64 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ABC02174 Falstatin (Others) [Plasmodium falciparum] 23 1.2
XP_001347836 Falcipain 2 (Cysteine protease) [Plasmodium falc... 23 1.2
XP_818889 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.1
XP_806774 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.1
>M.Javanica_Scaff10383g058613 on ABC02174 Falstatin (Others) [Plasmodium falciparum]
Length = 492
Score = 23.5 bits (49), Expect = 1.2, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 18/31 (58%), Gaps = 6/31 (19%)
Query: 39 CGSKPAANVLV------KLYDKDTGKFLKFF 63
CG+ P V++ +Y++DTG+ KF+
Sbjct: 419 CGAAPNHAVILVGYGMKDIYNEDTGRMEKFY 449
>M.Javanica_Scaff10383g058613 on XP_001347836 Falcipain 2 (Cysteine protease) [Plasmodium
falciparum]
Length = 492
Score = 23.5 bits (49), Expect = 1.2, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 18/31 (58%), Gaps = 6/31 (19%)
Query: 39 CGSKPAANVLV------KLYDKDTGKFLKFF 63
CG+ P V++ +Y++DTG+ KF+
Sbjct: 419 CGAAPNHAVILVGYGMKDIYNEDTGRMEKFY 449
>M.Javanica_Scaff10383g058613 on XP_818889 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 750
Score = 22.7 bits (47), Expect = 2.1, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 4 NLAIFPFIISFILLFLISNSNSMRQQAIGAK 34
N A PF+++ + +S+S + RQQ G +
Sbjct: 646 NKASIPFLVNTTIEGTVSSSTAGRQQQAGKE 676
>M.Javanica_Scaff10383g058613 on XP_806774 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 837
Score = 22.7 bits (47), Expect = 2.1, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 4 NLAIFPFIISFILLFLISNSNSMRQQAIGAK 34
N A PF+++ + +S+S + RQQ G +
Sbjct: 733 NKASIPFLVNTTIEGTVSSSTAGRQQQAGKE 763
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10586g059251
(118 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_805548 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.7
XP_808314 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.7
XP_806299 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.9
>M.Javanica_Scaff10586g059251 on XP_805548 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1044
Score = 24.6 bits (52), Expect = 1.7, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 24/52 (46%)
Query: 26 TTSFEKFNSNITTTKTTLKTTTPSQTTTKTSFSSSNQTIPLQLKVGLLVANG 77
+ S E + N T + ++TPS+ + + + + +P + LV NG
Sbjct: 913 SLSLEAGDGNSERTMNSDSSSTPSKRDAEPTSAEDTEDVPWTERAEFLVENG 964
>M.Javanica_Scaff10586g059251 on XP_808314 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 171
Score = 24.3 bits (51), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/50 (24%), Positives = 23/50 (46%)
Query: 28 SFEKFNSNITTTKTTLKTTTPSQTTTKTSFSSSNQTIPLQLKVGLLVANG 77
S E + N T + ++TPS+ + + + + +P + LV NG
Sbjct: 42 SLEAGDGNSERTMNSDSSSTPSKRDAEPTSAEDTEDVPWTERAEFLVENG 91
>M.Javanica_Scaff10586g059251 on XP_806299 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1047
Score = 23.5 bits (49), Expect = 4.9, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 87 GQSTPAISIALQRARDEHLVDNVNF 111
G S P + A Q A + H DN F
Sbjct: 781 GSSVPESATAAQSAENSHQEDNAQF 805
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10621g059356
(108 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351564 PfEMP1 (Establishment) [Plasmodium falciparum] 32 0.005
XP_001349434 PfEMP1 (Establishment) [Plasmodium falciparum] 31 0.012
XP_001351319 PfEMP1 (Establishment) [Plasmodium falciparum] 29 0.042
XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum] 26 0.48
XP_001609755 variant erythrocyte surface antigen-1, beta subuni... 26 0.60
XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum] 25 0.79
XP_001609936 variant erythrocyte surface antigen-1, beta subuni... 25 1.3
XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum] 25 1.6
XP_001611441 variant erythrocyte surface antigen-1, beta subuni... 24 2.9
XP_001608795 variant erythrocyte surface antigen-1, alpha subun... 23 3.8
XP_001610197 variant erythrocyte surface antigen-1, beta subuni... 23 4.1
XP_819146 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.2
XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum] 23 5.3
XP_001609041 variant erythrocyte surface antigen-1, alpha subun... 23 5.7
XP_001609163 variant erythrocyte surface antigen-1, alpha subun... 23 5.7
XP_001351435 PfEMP1 (Establishment) [Plasmodium falciparum] 23 5.9
XP_001608784 variant erythrocyte surface antigen-1, beta subuni... 23 6.0
XP_965997 PfEMP1 (Establishment) [Plasmodium falciparum] 23 6.2
XP_001609167 variant erythrocyte surface antigen-1, alpha subun... 23 6.3
XP_001611206 variant erythrocyte surface antigen-1, alpha subun... 23 7.5
XP_001609667 variant erythrocyte surface antigen-1, alpha subun... 23 7.5
XP_001609540 variant erythrocyte surface antigen-1, alpha subun... 22 8.2
XP_001349219 PfEMP1 (Establishment) [Plasmodium falciparum] 22 8.6
XP_803398 VSG (Establishment) [Trypanosoma brucei] 22 8.8
XP_001611365 variant erythrocyte surface antigen-1, alpha subun... 22 8.8
XP_001611897 variant erythrocyte surface antigen-1, alpha subun... 22 8.8
>M.Javanica_Scaff10621g059356 on XP_001351564 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2207
Score = 32.0 bits (71), Expect = 0.005, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Query: 32 PCPGNGKGNCCVGFCDNGKCNCAGYGIK 59
PC +GK C+ CD KCNCAG IK
Sbjct: 1512 PCINDGKEPKCIKTCDK-KCNCAGKWIK 1538
>M.Javanica_Scaff10621g059356 on XP_001349434 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2109
Score = 30.8 bits (68), Expect = 0.012, Method: Composition-based stats.
Identities = 14/22 (63%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Query: 33 CPGNGKGNCCVGFCDNGKCNCA 54
C NGKGN C C N KCNCA
Sbjct: 1434 CIDNGKGNICKNKC-NDKCNCA 1454
>M.Javanica_Scaff10621g059356 on XP_001351319 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2646
Score = 29.3 bits (64), Expect = 0.042, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Query: 33 CPGNGKGNCCVGFCDNGKCNCAG 55
C NG+GN C C N KCNC G
Sbjct: 1935 CINNGEGNICKRDCQN-KCNCVG 1956
>M.Javanica_Scaff10621g059356 on XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3346
Score = 26.2 bits (56), Expect = 0.48, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 4/34 (11%)
Query: 29 INDP---CPGNGKGNCCVGFCDNGKCNCAGYGIK 59
IND C NG+G+ C+ C+ KCNC IK
Sbjct: 2102 INDKISHCMKNGEGSTCIKGCEI-KCNCVSNWIK 2134
>M.Javanica_Scaff10621g059356 on XP_001609755 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 920
Score = 25.8 bits (55), Expect = 0.60, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 8/37 (21%)
Query: 37 GKGNCCVGFCDNGKCNCAGYGIKCTGSG-QGNCCTGS 72
GK CC+ G+ +G G KCT SG G CCTGS
Sbjct: 138 GKDVCCL----KGE---SGIGKKCTCSGGAGQCCTGS 167
>M.Javanica_Scaff10621g059356 on XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2994
Score = 25.4 bits (54), Expect = 0.79, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 4/22 (18%)
Query: 40 NCCVGFCDNGKCNCAGYGIKCT 61
NC G C+NGK +C +KCT
Sbjct: 2244 NCRSGICENGKDDC----VKCT 2261
>M.Javanica_Scaff10621g059356 on XP_001609936 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1133
Score = 25.0 bits (53), Expect = 1.3, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 3/63 (4%)
Query: 41 CCVGFCDNGKCNCAGYGIKCTGSGQGNCCTGSCVKGICCINRGYACSDSDHNKKCCPGLS 100
CC+ + + G +C+ G CC+ S G C G C S +KC
Sbjct: 142 CCLKGENGKESKGIGKKCECSTGGVSGCCSTS--SGTTCHQCG-TCGTSATGQKCYQSAY 198
Query: 101 CKA 103
CKA
Sbjct: 199 CKA 201
>M.Javanica_Scaff10621g059356 on XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2980
Score = 24.6 bits (52), Expect = 1.6, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 3/26 (11%)
Query: 35 GNGKGNCCVGFCDNGKCNCAGYGIKC 60
G KG+C V ++G NC+GYG C
Sbjct: 2036 GKIKGDCRV---EDGSKNCSGYGEDC 2058
>M.Javanica_Scaff10621g059356 on XP_001611441 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1205
Score = 23.9 bits (50), Expect = 2.9, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 14/31 (45%), Gaps = 3/31 (9%)
Query: 33 CPGNGKGN---CCVGFCDNGKCNCAGYGIKC 60
CPG G G C G +G C CA +C
Sbjct: 156 CPGTGGGGAQCCSPGTSGSGTCQCATNPKQC 186
>M.Javanica_Scaff10621g059356 on XP_001608795 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1323
Score = 23.5 bits (49), Expect = 3.8, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 14/33 (42%)
Query: 42 CVGFCDNGKCNCAGYGIKCTGSGQGNCCTGSCV 74
C G CD KC +G K G G C S V
Sbjct: 1130 CKGQCDPNKCKKGEHGQKSDGQVSGLCQCQSIV 1162
>M.Javanica_Scaff10621g059356 on XP_001610197 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1123
Score = 23.5 bits (49), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 37/88 (42%), Gaps = 11/88 (12%)
Query: 17 ILFQLNNGKCAGINDPCPGNGKGN-CCVGFCDNGKCNCAGYGIKCTGSGQ-GNCCTGSCV 74
+++QL G + G +G+ CC+G GK + G G + TGSG G CCT
Sbjct: 130 LIYQLAQGLQKWV-----GWQEGDTCCLGQTKGGKSDGIGKGCERTGSGVGGKCCTNDDK 184
Query: 75 KGICCINRGYACSDSDHNKKCCPGLSCK 102
C Y C KKC CK
Sbjct: 185 NSHEC----YQCGKVTAPKKCYLSAYCK 208
>M.Javanica_Scaff10621g059356 on XP_819146 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 825
Score = 23.5 bits (49), Expect = 4.2, Method: Composition-based stats.
Identities = 9/23 (39%), Positives = 11/23 (47%), Gaps = 2/23 (8%)
Query: 31 DPCPGNGKGNCCVGFCDNGKCNC 53
+ CP N +G C G KC C
Sbjct: 112 EECPANKEGTCSAG--SEEKCGC 132
>M.Javanica_Scaff10621g059356 on XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2178
Score = 23.1 bits (48), Expect = 5.3, Method: Composition-based stats.
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 46 CDNGKCNCAGYGIKC 60
C+NGKC+ G + C
Sbjct: 1332 CENGKCSGGGKKVNC 1346
>M.Javanica_Scaff10621g059356 on XP_001609041 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1318
Score = 23.1 bits (48), Expect = 5.7, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 12/29 (41%)
Query: 42 CVGFCDNGKCNCAGYGIKCTGSGQGNCCT 70
C G CD KC +G GS CT
Sbjct: 1132 CKGNCDPNKCRKGSHGSTAEGSKGTALCT 1160
>M.Javanica_Scaff10621g059356 on XP_001609163 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1360
Score = 23.1 bits (48), Expect = 5.7, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 25 KCAGINDPCPGNGKGNCCVGFCDNGKCNCAGYGIKCTG 62
+C G C N G D+ +CNC+ + CTG
Sbjct: 1174 ECRGCKGQCDPNKCKKGSHGGTDSAQCNCSSI-VSCTG 1210
>M.Javanica_Scaff10621g059356 on XP_001351435 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2209
Score = 23.1 bits (48), Expect = 5.9, Method: Composition-based stats.
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 46 CDNGKCNCAGYGIKCTG 62
CDN KC+ +KC G
Sbjct: 1372 CDNDKCSGGNTKVKCDG 1388
>M.Javanica_Scaff10621g059356 on XP_001608784 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 329
Score = 22.7 bits (47), Expect = 6.0, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 55 GYGIKCTGSGQGNCCTGSCVKGICCINRGYACSDSDHNKKCC 96
G G KCT SG G C + G C + C SD C
Sbjct: 157 GIGKKCTCSGGGGTCCSAGGSGTTC-HECSQCGTSDSAATKC 197
>M.Javanica_Scaff10621g059356 on XP_965997 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2879
Score = 22.7 bits (47), Expect = 6.2, Method: Composition-based stats.
Identities = 10/20 (50%), Positives = 10/20 (50%), Gaps = 6/20 (30%)
Query: 32 PCPGNGKGNCCVGFCDNGKC 51
PCP CV CD GKC
Sbjct: 451 PCPA------CVVECDGGKC 464
>M.Javanica_Scaff10621g059356 on XP_001609167 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1317
Score = 22.7 bits (47), Expect = 6.3, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 12/29 (41%)
Query: 42 CVGFCDNGKCNCAGYGIKCTGSGQGNCCT 70
C G CD KC +G GS CT
Sbjct: 1132 CKGNCDPNKCRKGSHGSTAEGSKGTALCT 1160
>M.Javanica_Scaff10621g059356 on XP_001611206 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1285
Score = 22.7 bits (47), Expect = 7.5, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 10/41 (24%)
Query: 40 NCCVGFCDNGKCNCAGYGIKCTGSGQG----NC-----CTG 71
N C G CD KC +G + TG +G NC CTG
Sbjct: 1097 NACKGQCDPNKCRKGEHG-RTTGDTKGTPLCNCSSIVSCTG 1136
Score = 22.3 bits (46), Expect = 8.5, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 17/44 (38%)
Query: 26 CAGINDPCPGNGKGNCCVGFCDNGKCNCAGYGIKCTGSGQGNCC 69
C DP P + +G+ C KC+G+ GN C
Sbjct: 169 CMKWKDPEPSSNEGHHLGRRCTKCSDGGGSSTCKCSGTSGGNTC 212
>M.Javanica_Scaff10621g059356 on XP_001609667 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1303
Score = 22.7 bits (47), Expect = 7.5, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 5/51 (9%)
Query: 25 KCAGINDPCPGNGKGNCCVGFCDNGKCNCAGYGIKCTGSGQGNCCTGSCVK 75
+C+G D C +G+ +C KC CA G C + C C K
Sbjct: 176 RCSGSRDGCMCSGEQDCT-----PDKCQCALNGKCCKCCCKSEHCKEKCQK 221
>M.Javanica_Scaff10621g059356 on XP_001609540 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1349
Score = 22.3 bits (46), Expect = 8.2, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 14/37 (37%), Gaps = 7/37 (18%)
Query: 42 CVGFCDNGKCNCAGYGIKCTGSGQGNC-------CTG 71
C G CD KC +G K G C CTG
Sbjct: 1164 CKGQCDPNKCKKGEHGQKSDAGSAGLCQCQSIVSCTG 1200
>M.Javanica_Scaff10621g059356 on XP_001349219 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2595
Score = 22.3 bits (46), Expect = 8.6, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 15/23 (65%), Gaps = 3/23 (13%)
Query: 38 KGNCCVGFCDNGKCNCAGYGIKC 60
+G+C V ++G NC+GYG C
Sbjct: 1263 EGDCRV---EDGSKNCSGYGEDC 1282
>M.Javanica_Scaff10621g059356 on XP_803398 VSG (Establishment) [Trypanosoma brucei]
Length = 473
Score = 22.3 bits (46), Expect = 8.8, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 11/24 (45%), Gaps = 6/24 (25%)
Query: 30 NDPCPGNGKGNCCVGFCDNGKCNC 53
ND C G GK +C N K C
Sbjct: 434 NDDCTGKGKDDC------NNKTGC 451
>M.Javanica_Scaff10621g059356 on XP_001611365 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1335
Score = 22.3 bits (46), Expect = 8.8, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 14/37 (37%), Gaps = 7/37 (18%)
Query: 42 CVGFCDNGKCNCAGYGIKCTGSGQGNC-------CTG 71
C G CD KC +G K G C CTG
Sbjct: 1149 CKGNCDPNKCKKGAHGQKSDTGSAGLCRCQSIVSCTG 1185
>M.Javanica_Scaff10621g059356 on XP_001611897 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1369
Score = 22.3 bits (46), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 7/58 (12%)
Query: 9 FLFFLSIFILFQLNNGKCAGINDPCPGNGKGNCCVGFCDNGKCNCAGYGIKCTG-SGQ 65
++ +LS + + L + + C G C G CD KC +G K TG SGQ
Sbjct: 1134 WVLYLSDALQWGLKSLTSEFLQIECRG------CKGQCDPNKCKKGEHGQKSTGNSGQ 1185
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10364g058544
(167 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAW78217 CSP (Invasion) [Plasmodium falciparum] 24 4.0
AAW78178 CSP (Invasion) [Plasmodium falciparum] 24 4.0
AAW78192 CSP (Invasion) [Plasmodium falciparum] 24 4.1
AAW78194 CSP (Invasion) [Plasmodium falciparum] 24 4.2
AAW78220 CSP (Invasion) [Plasmodium falciparum] 24 4.2
AAW78200 CSP (Invasion) [Plasmodium falciparum] 24 4.3
AAW78218 CSP (Invasion) [Plasmodium falciparum] 24 4.3
AAW78204 CSP (Invasion) [Plasmodium falciparum] 24 4.3
AAW78205 CSP (Invasion) [Plasmodium falciparum] 24 4.3
AAW78195 CSP (Invasion) [Plasmodium falciparum] 24 4.3
AAW78216 CSP (Invasion) [Plasmodium falciparum] 24 4.5
AAW78211 CSP (Invasion) [Plasmodium falciparum] 24 4.5
AAW78202 CSP (Invasion) [Plasmodium falciparum] 24 4.5
AAW78219 CSP (Invasion) [Plasmodium falciparum] 24 4.5
AAW78203 CSP (Invasion) [Plasmodium falciparum] 24 4.5
AAN87581 CSP (Invasion) [Plasmodium falciparum] 24 4.6
AAW78209 CSP (Invasion) [Plasmodium falciparum] 24 4.6
AAN87585 CSP (Invasion) [Plasmodium falciparum] 24 4.7
AAN87582 CSP (Invasion) [Plasmodium falciparum] 24 4.7
AAN87583 CSP (Invasion) [Plasmodium falciparum] 24 4.7
AAW78199 CSP (Invasion) [Plasmodium falciparum] 24 4.8
AAW78186 CSP (Invasion) [Plasmodium falciparum] 24 4.8
AAN87580 CSP (Invasion) [Plasmodium falciparum] 24 4.9
BAD73957 CSP (Invasion) [Plasmodium falciparum] 24 4.9
AAA63421 CSP (Invasion) [Plasmodium falciparum] 24 4.9
AAW78210 CSP (Invasion) [Plasmodium falciparum] 24 4.9
AAW78187 CSP (Invasion) [Plasmodium falciparum] 24 4.9
AAW78221 CSP (Invasion) [Plasmodium falciparum] 24 4.9
AAA29538 CSP (Invasion) [Plasmodium falciparum] 24 4.9
AAW78185 CSP (Invasion) [Plasmodium falciparum] 24 4.9
AAA29521 CSP (Invasion) [Plasmodium falciparum] 24 5.0
AAA29527 CSP (Invasion) [Plasmodium falciparum] 24 5.0
AAN87599 CSP (Invasion) [Plasmodium falciparum] 24 5.0
AAN87588 CSP (Invasion) [Plasmodium falciparum] 24 5.1
AAN87602 CSP (Invasion) [Plasmodium falciparum] 24 5.1
AAN87609 CSP (Invasion) [Plasmodium falciparum] 24 5.2
AAN87589 CSP (Invasion) [Plasmodium falciparum] 24 5.2
AAN87598 CSP (Invasion) [Plasmodium falciparum] 24 5.2
AAN87614 CSP (Invasion) [Plasmodium falciparum] 24 5.2
AAN87587 CSP (Invasion) [Plasmodium falciparum] 24 5.2
AAW78182 CSP (Invasion) [Plasmodium falciparum] 24 5.2
AAA63153 CSP (Invasion) [Plasmodium falciparum] 24 5.3
AAN87608 CSP (Invasion) [Plasmodium falciparum] 24 5.3
BAD73951 CSP (Invasion) [Plasmodium falciparum] 24 5.3
AAN87611 CSP (Invasion) [Plasmodium falciparum] 24 5.3
AAN87605 CSP (Invasion) [Plasmodium falciparum] 24 5.4
AAN87607 CSP (Invasion) [Plasmodium falciparum] 24 5.4
AAN87592 CSP (Invasion) [Plasmodium falciparum] 24 5.5
AAN87595 CSP (Invasion) [Plasmodium falciparum] 24 5.5
AAN87593 CSP (Invasion) [Plasmodium falciparum] 24 5.5
AAN87594 CSP (Invasion) [Plasmodium falciparum] 24 5.5
>M.Javanica_Scaff10364g058544 on AAW78217 CSP (Invasion) [Plasmodium falciparum]
Length = 370
Score = 24.3 bits (51), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 77 KKLKQPADGNPDPNANPNVDPNANP 101
>M.Javanica_Scaff10364g058544 on AAW78178 CSP (Invasion) [Plasmodium falciparum]
Length = 374
Score = 24.3 bits (51), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 77 KKLKQPADGNPDPNANPNVDPNANP 101
>M.Javanica_Scaff10364g058544 on AAW78192 CSP (Invasion) [Plasmodium falciparum]
Length = 370
Score = 24.3 bits (51), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 77 KKLKQPADGNPDPNANPNVDPNANP 101
>M.Javanica_Scaff10364g058544 on AAW78194 CSP (Invasion) [Plasmodium falciparum]
Length = 374
Score = 24.3 bits (51), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 77 KKLKQPADGNPDPNANPNVDPNANP 101
>M.Javanica_Scaff10364g058544 on AAW78220 CSP (Invasion) [Plasmodium falciparum]
Length = 370
Score = 24.3 bits (51), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 77 KKLKQPADGNPDPNANPNVDPNANP 101
>M.Javanica_Scaff10364g058544 on AAW78200 CSP (Invasion) [Plasmodium falciparum]
Length = 374
Score = 24.3 bits (51), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 77 KKLKQPADGNPDPNANPNVDPNANP 101
>M.Javanica_Scaff10364g058544 on AAW78218 CSP (Invasion) [Plasmodium falciparum]
Length = 370
Score = 24.3 bits (51), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 77 KKLKQPADGNPDPNANPNVDPNANP 101
>M.Javanica_Scaff10364g058544 on AAW78204 CSP (Invasion) [Plasmodium falciparum]
Length = 374
Score = 24.3 bits (51), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 77 KKLKQPADGNPDPNANPNVDPNANP 101
>M.Javanica_Scaff10364g058544 on AAW78205 CSP (Invasion) [Plasmodium falciparum]
Length = 378
Score = 24.3 bits (51), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 77 KKLKQPADGNPDPNANPNVDPNANP 101
>M.Javanica_Scaff10364g058544 on AAW78195 CSP (Invasion) [Plasmodium falciparum]
Length = 378
Score = 24.3 bits (51), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 77 KKLKQPADGNPDPNANPNVDPNANP 101
>M.Javanica_Scaff10364g058544 on AAW78216 CSP (Invasion) [Plasmodium falciparum]
Length = 362
Score = 24.3 bits (51), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 77 KKLKQPADGNPDPNANPNVDPNANP 101
>M.Javanica_Scaff10364g058544 on AAW78211 CSP (Invasion) [Plasmodium falciparum]
Length = 366
Score = 24.3 bits (51), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 77 KKLKQPADGNPDPNANPNVDPNANP 101
>M.Javanica_Scaff10364g058544 on AAW78202 CSP (Invasion) [Plasmodium falciparum]
Length = 370
Score = 24.3 bits (51), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 77 KKLKQPADGNPDPNANPNVDPNANP 101
>M.Javanica_Scaff10364g058544 on AAW78219 CSP (Invasion) [Plasmodium falciparum]
Length = 374
Score = 24.3 bits (51), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 77 KKLKQPADGNPDPNANPNVDPNANP 101
>M.Javanica_Scaff10364g058544 on AAW78203 CSP (Invasion) [Plasmodium falciparum]
Length = 382
Score = 24.3 bits (51), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 77 KKLKQPADGNPDPNANPNVDPNANP 101
>M.Javanica_Scaff10364g058544 on AAN87581 CSP (Invasion) [Plasmodium falciparum]
Length = 385
Score = 24.3 bits (51), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 92 KKLKQPADGNPDPNANPNVDPNANP 116
>M.Javanica_Scaff10364g058544 on AAW78209 CSP (Invasion) [Plasmodium falciparum]
Length = 370
Score = 24.3 bits (51), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 77 KKLKQPADGNPDPNANPNVDPNANP 101
>M.Javanica_Scaff10364g058544 on AAN87585 CSP (Invasion) [Plasmodium falciparum]
Length = 389
Score = 24.3 bits (51), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 92 KKLKQPADGNPDPNANPNVDPNANP 116
>M.Javanica_Scaff10364g058544 on AAN87582 CSP (Invasion) [Plasmodium falciparum]
Length = 397
Score = 24.3 bits (51), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 92 KKLKQPADGNPDPNANPNVDPNANP 116
>M.Javanica_Scaff10364g058544 on AAN87583 CSP (Invasion) [Plasmodium falciparum]
Length = 397
Score = 24.3 bits (51), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 92 KKLKQPADGNPDPNANPNVDPNANP 116
>M.Javanica_Scaff10364g058544 on AAW78199 CSP (Invasion) [Plasmodium falciparum]
Length = 386
Score = 24.3 bits (51), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 77 KKLKQPADGNPDPNANPNVDPNANP 101
>M.Javanica_Scaff10364g058544 on AAW78186 CSP (Invasion) [Plasmodium falciparum]
Length = 397
Score = 24.3 bits (51), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 96 KKLKQPADGNPDPNANPNVDPNANP 120
>M.Javanica_Scaff10364g058544 on AAN87580 CSP (Invasion) [Plasmodium falciparum]
Length = 385
Score = 24.3 bits (51), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 92 KKLKQPADGNPDPNANPNVDPNANP 116
>M.Javanica_Scaff10364g058544 on BAD73957 CSP (Invasion) [Plasmodium falciparum]
Length = 389
Score = 24.3 bits (51), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 92 KKLKQPADGNPDPNANPNVDPNANP 116
>M.Javanica_Scaff10364g058544 on AAA63421 CSP (Invasion) [Plasmodium falciparum]
Length = 393
Score = 24.3 bits (51), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 92 KKLKQPADGNPDPNANPNVDPNANP 116
>M.Javanica_Scaff10364g058544 on AAW78210 CSP (Invasion) [Plasmodium falciparum]
Length = 378
Score = 24.3 bits (51), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 77 KKLKQPADGNPDPNANPNVDPNANP 101
>M.Javanica_Scaff10364g058544 on AAW78187 CSP (Invasion) [Plasmodium falciparum]
Length = 405
Score = 24.3 bits (51), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 96 KKLKQPADGNPDPNANPNVDPNANP 120
>M.Javanica_Scaff10364g058544 on AAW78221 CSP (Invasion) [Plasmodium falciparum]
Length = 393
Score = 24.3 bits (51), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 96 KKLKQPADGNPDPNANPNVDPNANP 120
>M.Javanica_Scaff10364g058544 on AAA29538 CSP (Invasion) [Plasmodium falciparum]
Length = 315
Score = 23.9 bits (50), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 95 KKLKQPADGNPDPNANPNVDPNANP 119
>M.Javanica_Scaff10364g058544 on AAW78185 CSP (Invasion) [Plasmodium falciparum]
Length = 401
Score = 24.3 bits (51), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 96 KKLKQPADGNPDPNANPNVDPNANP 120
>M.Javanica_Scaff10364g058544 on AAA29521 CSP (Invasion) [Plasmodium falciparum]
Length = 397
Score = 24.3 bits (51), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 92 KKLKQPADGNPDPNANPNVDPNANP 116
>M.Javanica_Scaff10364g058544 on AAA29527 CSP (Invasion) [Plasmodium falciparum]
Length = 405
Score = 24.3 bits (51), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 92 KKLKQPADGNPDPNANPNVDPNANP 116
>M.Javanica_Scaff10364g058544 on AAN87599 CSP (Invasion) [Plasmodium falciparum]
Length = 388
Score = 24.3 bits (51), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 111 KKLKQPADGNPDPNANPNVDPNANP 135
>M.Javanica_Scaff10364g058544 on AAN87588 CSP (Invasion) [Plasmodium falciparum]
Length = 404
Score = 24.3 bits (51), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 111 KKLKQPADGNPDPNANPNVDPNANP 135
>M.Javanica_Scaff10364g058544 on AAN87602 CSP (Invasion) [Plasmodium falciparum]
Length = 412
Score = 24.3 bits (51), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 111 KKLKQPADGNPDPNANPNVDPNANP 135
>M.Javanica_Scaff10364g058544 on AAN87609 CSP (Invasion) [Plasmodium falciparum]
Length = 408
Score = 23.9 bits (50), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 111 KKLKQPADGNPDPNANPNVDPNANP 135
>M.Javanica_Scaff10364g058544 on AAN87589 CSP (Invasion) [Plasmodium falciparum]
Length = 412
Score = 23.9 bits (50), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 111 KKLKQPADGNPDPNANPNVDPNANP 135
>M.Javanica_Scaff10364g058544 on AAN87598 CSP (Invasion) [Plasmodium falciparum]
Length = 412
Score = 23.9 bits (50), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 111 KKLKQPADGNPDPNANPNVDPNANP 135
>M.Javanica_Scaff10364g058544 on AAN87614 CSP (Invasion) [Plasmodium falciparum]
Length = 416
Score = 23.9 bits (50), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 111 KKLKQPADGNPDPNANPNVDPNANP 135
>M.Javanica_Scaff10364g058544 on AAN87587 CSP (Invasion) [Plasmodium falciparum]
Length = 412
Score = 23.9 bits (50), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 111 KKLKQPADGNPDPNANPNVDPNANP 135
>M.Javanica_Scaff10364g058544 on AAW78182 CSP (Invasion) [Plasmodium falciparum]
Length = 397
Score = 23.9 bits (50), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 96 KKLKQPADGNPDPNANPNVDPNANP 120
>M.Javanica_Scaff10364g058544 on AAA63153 CSP (Invasion) [Plasmodium falciparum]
Length = 408
Score = 23.9 bits (50), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 111 KKLKQPADGNPDPNANPNVDPNANP 135
>M.Javanica_Scaff10364g058544 on AAN87608 CSP (Invasion) [Plasmodium falciparum]
Length = 392
Score = 23.9 bits (50), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 111 KKLKQPADGNPDPNANPNVDPNANP 135
>M.Javanica_Scaff10364g058544 on BAD73951 CSP (Invasion) [Plasmodium falciparum]
Length = 408
Score = 23.9 bits (50), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 111 KKLKQPADGNPDPNANPNVDPNANP 135
>M.Javanica_Scaff10364g058544 on AAN87611 CSP (Invasion) [Plasmodium falciparum]
Length = 412
Score = 23.9 bits (50), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 111 KKLKQPADGNPDPNANPNVDPNANP 135
>M.Javanica_Scaff10364g058544 on AAN87605 CSP (Invasion) [Plasmodium falciparum]
Length = 412
Score = 23.9 bits (50), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 111 KKLKQPADGNPDPNANPNVDPNANP 135
>M.Javanica_Scaff10364g058544 on AAN87607 CSP (Invasion) [Plasmodium falciparum]
Length = 392
Score = 23.9 bits (50), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 111 KKLKQPADGNPDPNANPNVDPNANP 135
>M.Javanica_Scaff10364g058544 on AAN87592 CSP (Invasion) [Plasmodium falciparum]
Length = 396
Score = 23.9 bits (50), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 111 KKLKQPADGNPDPNANPNVDPNANP 135
>M.Javanica_Scaff10364g058544 on AAN87595 CSP (Invasion) [Plasmodium falciparum]
Length = 392
Score = 23.9 bits (50), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 111 KKLKQPADGNPDPNANPNVDPNANP 135
>M.Javanica_Scaff10364g058544 on AAN87593 CSP (Invasion) [Plasmodium falciparum]
Length = 396
Score = 23.9 bits (50), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 RKLSDRLEGNTNKMANTNVESTATP 74
+KL +GN + AN NV+ A P
Sbjct: 111 KKLKQPADGNPDPNANPNVDPNANP 135
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10482g058928
(139 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349207 EBA-175 (Adhesin) [Plasmodium falciparum] 23 7.3
>M.Javanica_Scaff10482g058928 on XP_001349207 EBA-175 (Adhesin) [Plasmodium falciparum]
Length = 1462
Score = 23.5 bits (49), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
Query: 24 GPSTSYSQNVMEQGVQRAMNVQGRGGRLPIEILFEQV----DRSLKLEKGEVYKGNELYI 79
GP + S+ E+ V R G + +E + + + + GE+Y N
Sbjct: 1075 GPLDNTSEETTERISNNEYKVNEREGERTLTKEYEDIVLKSHMNRESDDGELYDENSDLS 1134
Query: 80 KIVDEERIIQHFLKLNNESENSHS 103
+ DE + +K N+ SE SH+
Sbjct: 1135 TVNDESEDAEAKMKGNDTSEMSHN 1158
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10584g059248
(530 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_828097 VSG (Establishment) [Trypanosoma brucei] 31 0.19
XP_001609033 variant erythrocyte surface antigen-1, alpha subun... 26 8.4
XP_001349035 PfEMP1 (Establishment) [Plasmodium falciparum] 26 9.1
>M.Javanica_Scaff10584g059248 on XP_828097 VSG (Establishment) [Trypanosoma brucei]
Length = 520
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 22/117 (18%)
Query: 129 DLTGIVHRE----WRYIPLPKSLEEANTCFDNEGKRRQNGEEWIVGTYFVMLCHQVLSNQ 184
D TG ++ ++ IP KSLE+A T +N K+ + L Q
Sbjct: 326 DYTGYFSKQAGKTYKDIPWLKSLEDAVTALENMHKQEEKANN--------------LDAQ 371
Query: 185 SSWLIMQVEII--ACLREDLKTRIPVGSEV--EETPGRFLVCRRTDSDPTGIVWREW 237
+ L+ Q +I A L DL T V +EV E P + + C + D++ T + +W
Sbjct: 372 LANLLKQANLIYAAALNGDLMTETAVKAEVVPEGNPRQNVNCAQHDNNKTCVSPCKW 428
>M.Javanica_Scaff10584g059248 on XP_001609033 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1270
Score = 25.8 bits (55), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 121 VCRRDNPNDLTGIVHRE--WRYIPLPKSLEEANTCFDNEGKRRQNGEEWI 168
C++D NDL G H + +Y+ S + +TC + + Q G +W+
Sbjct: 68 TCKKDGSNDLNGSPHGDSSCKYLQDKDSENKCDTCGCMKWVKPQRGIDWV 117
>M.Javanica_Scaff10584g059248 on XP_001349035 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2239
Score = 25.8 bits (55), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 191 QVEIIACLREDLKTRIPVGSEVEETPG 217
+ +II C+ EDL T+I GS + + G
Sbjct: 1598 KSDIIECMLEDLDTKIKTGSCLTQPSG 1624
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff104g001970
(127 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001352170 MSP1 (Invasion) [Plasmodium falciparum] 24 3.9
XP_805943 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 6.3
XP_656181 Hgl2 (Adhesin) [Entamoeba histolytica] 23 8.2
XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum] 23 9.1
>M.Javanica_Scaff104g001970 on XP_001352170 MSP1 (Invasion) [Plasmodium falciparum]
Length = 1720
Score = 23.9 bits (50), Expect = 3.9, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 10/61 (16%)
Query: 58 ARYQCLQSSCSTFAHGCIAKYDN---CCYPLKCGTNG-KC-----QACLENNDTCEFDND 108
+++QC++ C + GC D C L G KC C ENN C+ D
Sbjct: 1609 SQHQCVKKQCPENS-GCFRHLDEREECKCLLNYKQEGDKCVENPNPTCNENNGGCDADAT 1667
Query: 109 C 109
C
Sbjct: 1668 C 1668
>M.Javanica_Scaff104g001970 on XP_805943 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 983
Score = 23.1 bits (48), Expect = 6.3, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 10/59 (16%)
Query: 33 GCNNEVKC----CGKNL------FCTRTFASGSKRARYQCLQSSCSTFAHGCIAKYDNC 81
GC NE CG+ L F + T + Y C+ ++ + G +A +NC
Sbjct: 450 GCRNEKNNWRSDCGEALAEGLVGFLSNTSTDSTWADEYLCVNATITKGTKGKVASTENC 508
>M.Javanica_Scaff104g001970 on XP_656181 Hgl2 (Adhesin) [Entamoeba histolytica]
Length = 1286
Score = 23.1 bits (48), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Query: 67 CSTFAHGCIAKYDNC-CYPLKCGT-NGKCQACLENNDTCEFDNDCCIGHCKRDV 118
CS I +D+C +CG NGKCQ +N+ +C F+ D D+
Sbjct: 711 CSMGTDNVITYHDDCDSRKSQCGNFNGKCQPNGDNSYSCVFEKDKTSSKSDNDI 764
>M.Javanica_Scaff104g001970 on XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1711
Score = 22.7 bits (47), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 12/52 (23%), Positives = 21/52 (40%), Gaps = 7/52 (13%)
Query: 28 KYYGEGCNNE-------VKCCGKNLFCTRTFASGSKRARYQCLQSSCSTFAH 72
K++ E NE ++ K C G + A Y ++ +TF+H
Sbjct: 426 KHFNEELRNEGKDVRSFLQLLSKEKICKERIQVGEETANYGNFENESNTFSH 477
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1052g012350
(164 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349737 PfEMP1 (Establishment) [Plasmodium falciparum] 27 0.73
XP_816177 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.2
XP_820773 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.2
XP_805943 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.2
XP_966160 PfEMP1 (Establishment) [Plasmodium falciparum] 24 6.2
>M.Javanica_Scaff1052g012350 on XP_001349737 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2199
Score = 26.9 bits (58), Expect = 0.73, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 40 KERARCHMIIKDTETESPGRPAPEGDGCFTEQHGDEERVYCDLVCPKA--HTVFHASFNH 97
K+R IK+ ++ GR + +G C E D+E+++ DL+CP H F+ + +
Sbjct: 1271 KKRTEMLGKIKEDCYKNGGRCSGDGLKC-NEIVIDKEKIFGDLLCPTCARHCRFYKKWIN 1329
Query: 98 GHRACF----NYYTYQLEKREND 116
R F N Y+ Q +K E +
Sbjct: 1330 TKRDEFNKQSNAYSEQKKKYEEE 1352
>M.Javanica_Scaff1052g012350 on XP_816177 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 779
Score = 26.2 bits (56), Expect = 1.2, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 23 QYRQLKCATPDGQLKAGKERARCHM 47
Q+ Q KC +P G A + R + H+
Sbjct: 155 QFEQGKCPSPKGAPDASQSRTKVHV 179
>M.Javanica_Scaff1052g012350 on XP_820773 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 779
Score = 26.2 bits (56), Expect = 1.2, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 23 QYRQLKCATPDGQLKAGKERARCHM 47
Q+ Q KC +P G A + R + H+
Sbjct: 155 QFEQGKCPSPKGAPDASQSRTKVHV 179
>M.Javanica_Scaff1052g012350 on XP_805943 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 983
Score = 24.3 bits (51), Expect = 5.2, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 10/24 (41%)
Query: 113 RENDWYIWRSANCLNSTGTWTIGC 136
+E D YI R C N W C
Sbjct: 439 KEKDAYIAREYGCRNEKNNWRSDC 462
>M.Javanica_Scaff1052g012350 on XP_966160 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2394
Score = 23.9 bits (50), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Query: 20 GHPQYRQLKCATPDGQLKAGKERARC 45
GH ++ KC TP G+ K+G + A C
Sbjct: 1231 GHEKFPNWKCVTPSGE-KSGDKGAIC 1255
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1037g012221
(158 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_805533 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.8
XP_820382 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.8
XP_808156 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.3
XP_819563 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.4
XP_804895 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.6
XP_815318 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.5
>M.Javanica_Scaff1037g012221 on XP_805533 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 794
Score = 25.4 bits (54), Expect = 1.8, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 5/37 (13%)
Query: 13 LKPILIDSAGS-----DDEHQFNPYQPRDVGTSGTGT 44
LKP + + GS D E+ Y+ RD+GT+ TGT
Sbjct: 322 LKPRITEWEGSLLMIVDCENGQRVYESRDMGTTWTGT 358
>M.Javanica_Scaff1037g012221 on XP_820382 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 729
Score = 25.4 bits (54), Expect = 1.8, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 5/41 (12%)
Query: 24 DDEHQFNPYQPRDVGTSGTGTDEHEGTGSIPTTEGYSQDMY 64
D E + N Y+ RD+GT+ T E G++P SQ +
Sbjct: 334 DCEDEQNVYESRDMGTAWT-----EAVGTLPGVWVKSQSFF 369
>M.Javanica_Scaff1037g012221 on XP_808156 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1058
Score = 24.3 bits (51), Expect = 4.3, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Query: 24 DDEHQFN-----PYQPRDVGTSGTGTDEHEGTGSIPTTEGYSQDMYPSSLQPSHNLSDLD 78
D EHQ + DV ++G GT E + S+ +G S+ S P+ + SD++
Sbjct: 896 DGEHQVRQSTELATENDDVRSTGNGTTGAEESLSLEAGDGNSERTMGSDSSPTPSKSDVE 955
>M.Javanica_Scaff1037g012221 on XP_819563 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 720
Score = 24.3 bits (51), Expect = 4.4, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 9/44 (20%)
Query: 24 DDEHQFNPYQPRDVGTSGTGTDEHEGTGSIP----TTEGYSQDM 63
D E + N Y+ RD+GT+ T E G++P + + QD+
Sbjct: 336 DCEDEQNVYESRDMGTAWT-----EAIGTLPGVWVKSRSFLQDL 374
>M.Javanica_Scaff1037g012221 on XP_804895 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 787
Score = 24.3 bits (51), Expect = 4.6, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
Query: 13 LKPILIDSAGS-----DDEHQFNPYQPRDVGTSGTGT 44
LKP + + GS D E Y+ RD+GT+ TGT
Sbjct: 318 LKPRVTEWEGSLLMIVDCEDGQRVYESRDMGTTWTGT 354
>M.Javanica_Scaff1037g012221 on XP_815318 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 587
Score = 23.9 bits (50), Expect = 5.5, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Query: 24 DDEHQFN-----PYQPRDVGTSGTGTDEHEGTGSIPTTEGYSQDMYPSSLQPSHNLSDLD 78
D EHQ + DV ++G GT E + S+ +G S+ S P+ + SD++
Sbjct: 425 DGEHQVQQSTELATENDDVRSTGNGTTGAEESLSLEAGDGNSERTMGSDSSPTPSKSDVE 484
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1059g012421
(672 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351221 CTRP (Adhesin) [Plasmodium falciparum] 37 0.003
XP_803952 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.27
XP_808062 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.44
XP_808314 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.99
XP_804836 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 1.5
XP_808758 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 1.8
XP_803245 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.1
XP_802902 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 3.4
XP_817719 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 4.4
XP_814919 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 4.9
XP_804011 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 4.9
XP_827749 VSG (Establishment) [Trypanosoma brucei] 27 5.1
BAC44837 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 27 5.6
XP_813616 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 5.7
XP_819381 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 7.5
XP_815479 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 9.7
>M.Javanica_Scaff1059g012421 on XP_001351221 CTRP (Adhesin) [Plasmodium falciparum]
Length = 2112
Score = 37.4 bits (85), Expect = 0.003, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 434 PHQMIQXTQEDTTP-TPEDTTP-TPEDTTTQEETTPTP----EDTTQPPEDTT--TPSED 485
P + + ++TP +P ++TP +P ++T + TP E T P ++T +PSE
Sbjct: 766 PSESTPGSPSESTPGSPSESTPGSPSESTPGNPSESTPGSPSESTPGNPSESTPGSPSES 825
Query: 486 TTPTPEDTTPNAGRVQLPNT 505
T +P ++TP +G NT
Sbjct: 826 TPGSPSESTPCSGTCLCHNT 845
Score = 35.4 bits (80), Expect = 0.011, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Query: 443 EDTTPTPEDTTP-TPEDTTTQEETTPTP----EDTTQPPEDTT--TPSEDTTPTPEDTTP 495
E T +P ++TP +P ++T + TP E T P ++T PSE T +P ++TP
Sbjct: 768 ESTPGSPSESTPGSPSESTPGSPSESTPGNPSESTPGSPSESTPGNPSESTPGSPSESTP 827
Query: 496 NAGRVQLPNTET 507
+ P + T
Sbjct: 828 GSPSESTPCSGT 839
Score = 34.3 bits (77), Expect = 0.029, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Query: 448 TPEDTTP-TPEDTTTQEETTPTPEDTTQPPEDTT-TPSEDTTPTPEDTTPNAGRVQLPNT 505
+P ++TP +P ++T + TP P E T PSE T +P ++TP P +
Sbjct: 765 SPSESTPGSPSESTPGSPSESTP---GSPSESTPGNPSESTPGSPSESTPGNPSESTPGS 821
Query: 506 ETNTTTQLPDGYKP 519
+ +T P P
Sbjct: 822 PSESTPGSPSESTP 835
>M.Javanica_Scaff1059g012421 on XP_803952 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 200
Score = 30.0 bits (66), Expect = 0.27, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 6/44 (13%)
Query: 450 EDTTPTPEDTTTQEETTPTPEDTTQPPEDTTTPSEDTTPTPEDT 493
ED+ P+ T P +T+ P +T PSE TP DT
Sbjct: 118 EDSKEVPQTVDT------APGNTSTTPGETKIPSESNATTPSDT 155
>M.Javanica_Scaff1059g012421 on XP_808062 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 825
Score = 30.0 bits (66), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 411 ELPHQRIRPPNLRTQLRRPKKQLPHQMIQXTQEDTTPTPEDTTPTPEDTTTQEETTPTPE 470
EL ++ P+L + ++P Q+ + E + + E T P E+ +++ T P
Sbjct: 702 ELKASKVTIPSLGVE-KQPTGQVTGTGLSVAPE--SRSEETTLPLVENGDSEDVGTA-PV 757
Query: 471 DTTQPPEDTTTPSEDTTPTPEDT 493
+ + P +T PSE TP DT
Sbjct: 758 NASTTPGETKIPSESNATTPSDT 780
>M.Javanica_Scaff1059g012421 on XP_808314 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 171
Score = 28.1 bits (61), Expect = 0.99, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 27/71 (38%), Gaps = 18/71 (25%)
Query: 441 TQEDTTPTPEDTTPTPEDTTTQ--------------EETTPTPE----DTTQPPEDTTTP 482
+ +TP+ D PT + T EE T E +T+ P +T P
Sbjct: 56 SDSSSTPSKRDAEPTSAEDTEDVPWTERAEFLVENGEEVPQTVETASGNTSTAPGETEIP 115
Query: 483 SEDTTPTPEDT 493
S+ TP DT
Sbjct: 116 SKSNATTPSDT 126
>M.Javanica_Scaff1059g012421 on XP_804836 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 919
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 34/90 (37%), Gaps = 13/90 (14%)
Query: 405 PPHLRIE-LPHQRIRPPNLRTQLRRPKKQLPHQMIQXTQEDTTPTPEDTTPTPEDTTTQE 463
PPHL E +P + P + P+ Q TQE T P E+ E
Sbjct: 797 PPHLGSEDIPKADVERPIHEEEATSPEGATERQ----TQETTAPLVENGD--------SE 844
Query: 464 ETTPTPEDTTQPPEDTTTPSEDTTPTPEDT 493
+ P + + P +T PSE P DT
Sbjct: 845 DVGTAPGNASTLPGETKIPSESNATIPSDT 874
>M.Javanica_Scaff1059g012421 on XP_808758 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 823
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 411 ELPHQRIRPPNLRTQLRRPKKQLPHQMIQXTQEDTTPTPEDTTPTPEDTTTQEETTPTPE 470
EL ++ P+L + +P Q+ + E + + E T P E+ +++ T P
Sbjct: 700 ELHASKVNIPSLGVE-EQPTGQVTGTGLSVASE--SKSEETTAPLVENGDSEDVGTA-PV 755
Query: 471 DTTQPPEDTTTPSEDTTPTPEDT 493
+ + P T PS+ TP DT
Sbjct: 756 NASTTPGGTKIPSKSNATTPSDT 778
>M.Javanica_Scaff1059g012421 on XP_803245 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 194
Score = 27.3 bits (59), Expect = 2.1, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 19/80 (23%)
Query: 443 EDTTPTPEDTTPTPED--TTTQEETTPTP---------EDTTQPPEDTTTPSEDTTPTPE 491
E T + TP+ D TT+ E+T ED + P T E+T TP
Sbjct: 74 ERTMSSDSSLTPSKSDAETTSAEDTDDISRIEGAEFSFEDGKEVPRTVETAPENTNTTP- 132
Query: 492 DTTPNAGRVQLPNTETNTTT 511
G ++P +E+N TT
Sbjct: 133 ------GETKIP-SESNATT 145
>M.Javanica_Scaff1059g012421 on XP_802902 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 719
Score = 27.3 bits (59), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 13/90 (14%)
Query: 405 PPHLRIE-LPHQRIRPPNLRTQLRRPKKQLPHQMIQXTQEDTTPTPEDTTPTPEDTTTQE 463
PPHL E +P + P + P+ Q TQE T P E+ ED+ E
Sbjct: 597 PPHLGTEVIPKADVERPIHEEEATSPEGATEWQ----TQEITAPLVEN-----EDS---E 644
Query: 464 ETTPTPEDTTQPPEDTTTPSEDTTPTPEDT 493
+ + +T+ P +T PS+ P D
Sbjct: 645 DVSTASGNTSTLPGETKIPSKSNATAPSDA 674
>M.Javanica_Scaff1059g012421 on XP_817719 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1053
Score = 26.9 bits (58), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 468 TPEDTTQPPEDTTTPSEDTTPTPEDT 493
PE+T P +T PSE TP DT
Sbjct: 983 APENTNTTPGETAIPSESNATTPSDT 1008
>M.Javanica_Scaff1059g012421 on XP_814919 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 854
Score = 26.9 bits (58), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
Query: 119 YYEKTNEGYSKEGYGENKGYEYKEGYEKGYGDNKGYAGNGGYEKGYGEKEGYNKEGYGDK 178
+ +K G K+G G G E K+G G D KG +G+G +KG ++G +K+G GD
Sbjct: 762 FEDKKGSGDDKKGSG---GSEDKKGI-GGAEDKKG-SGDGEGKKGI--RDGDDKKGSGD- 813
Query: 179 NEYKEGYGENNEYDKGYG 196
+E K+G G E KG G
Sbjct: 814 SEDKKGIG-GAEDKKGSG 830
>M.Javanica_Scaff1059g012421 on XP_804011 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 952
Score = 26.9 bits (58), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 13/90 (14%)
Query: 405 PPHLRIE-LPHQRIRPPNLRTQLRRPKKQLPHQMIQXTQEDTTPTPEDTTPTPEDTTTQE 463
PPHL E +P + P + P+ Q TQE T P E+ ED+ E
Sbjct: 830 PPHLGTEVIPKADVERPIHEEEATSPEGATEWQ----TQEITAPLVEN-----EDS---E 877
Query: 464 ETTPTPEDTTQPPEDTTTPSEDTTPTPEDT 493
+ + +T+ P +T PS+ P D
Sbjct: 878 DVSTASGNTSTLPGETKIPSKSNATAPSDA 907
>M.Javanica_Scaff1059g012421 on XP_827749 VSG (Establishment) [Trypanosoma brucei]
Length = 516
Score = 26.6 bits (57), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Query: 166 EKEGYNKEGYGDKNEYKEGYGENNEYDKGYGYNEVYNEEKGYGGYDEGYGGKSYEDNKGY 225
EK+G ++ Y D ++ +G G+N + K Y EEK G +E GK ED K
Sbjct: 415 EKKG-TEDNYKDGCKW-DGEGDNKKCVKDLDYKPKQVEEKDDGIKEEKCAGKQQEDCKSM 472
Query: 226 KKKKYRGHKMRYGGY 240
K++G +Y +
Sbjct: 473 -DCKWKGENYKYSSF 486
>M.Javanica_Scaff1059g012421 on BAC44837 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 1566
Score = 26.6 bits (57), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 47/117 (40%), Gaps = 7/117 (5%)
Query: 423 RTQLRRPKKQLP-HQMIQXTQEDTTPTPEDTTPTPEDTTTQEETTPTPEDTTQPPEDTTT 481
++ L +PK P H++ + TT E + T+ ET P D +D
Sbjct: 1101 KSNLEKPKDVEPSHEISEPVLSGTTGKEESELLKSKSIETKGETDPRSNDQEDATDDVVE 1160
Query: 482 PSEDTTPTPEDTTPNAGRV---QLP-NTETNTTTQLPDGYKPPHLRIELPRQRIRPP 534
S D + ++ N V + P +ET ++ D + + E+P ++PP
Sbjct: 1161 NSRDDNNSLSNSVDNQSNVLNREDPIASETEVVSEPEDSSRI--ITTEVPSTTVKPP 1215
>M.Javanica_Scaff1059g012421 on XP_813616 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1038
Score = 26.6 bits (57), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 5/82 (6%)
Query: 403 IQPPHLRIELPHQRIRPPNLRTQLRRPK---KQLPHQMIQXTQEDTTPTPEDTTPTPEDT 459
I P E+ + P QL K + PH+ Q+D+ P+D P
Sbjct: 773 ISEPATATEIAGASL--PEDNAQLSEGKTVQQATPHEPKDSMQQDSDVQPQDPQPAELTG 830
Query: 460 TTQEETTPTPEDTTQPPEDTTT 481
T+ ET+ DT +P ED T
Sbjct: 831 VTELETSSEGNDTEEPEEDGGT 852
>M.Javanica_Scaff1059g012421 on XP_819381 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1046
Score = 26.2 bits (56), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 469 PEDTTQPPEDTTTPSEDTTPTPEDT 493
PE+T P +T PSE TP DT
Sbjct: 977 PENTNTTPGETKIPSESNATTPSDT 1001
>M.Javanica_Scaff1059g012421 on XP_815479 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1047
Score = 25.8 bits (55), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 18/66 (27%)
Query: 446 TPTPEDTTPT-PEDT-----TTQEETTP------------TPEDTTQPPEDTTTPSEDTT 487
TP+ D PT EDT T EE++ P +T P +T PSE
Sbjct: 937 TPSKSDAEPTSAEDTDNISRTEGEESSSEDVKEVPQTVDTAPGNTNTTPGETMIPSESNA 996
Query: 488 PTPEDT 493
TP DT
Sbjct: 997 TTPSDT 1002
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1041g012251
(146 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum] 25 1.9
>M.Javanica_Scaff1041g012251 on XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3954
Score = 25.4 bits (54), Expect = 1.9, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Query: 51 YNKAKIRIQSCPMIILSCRVIAGICQGDIRCLEE 84
YNK+K +I+ C + SC+ G C+G+ C+++
Sbjct: 2235 YNKSKEKIKPCTNDVNSCK--QG-CKGNCDCVDK 2265
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10618g059348
(82 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum] 22 9.1
>M.Javanica_Scaff10618g059348 on XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2238
Score = 21.6 bits (44), Expect = 9.1, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 4/56 (7%)
Query: 19 GLGRGSVTFAPRT----FAPRLMRRDFCAATYAPSDFCAGGLLRRDFCAGRRLRRD 70
G SVT +T FAP++ CA TY S G + + G+ L D
Sbjct: 1116 GAQENSVTTPQQTLWKDFAPQIWNGMICALTYEDSGDKGGKPTQNEQVKGQLLESD 1171
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10551g059152
(363 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_954179 TashAT2 (Establishment) [Theileria annulata] 28 0.85
XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum] 27 1.6
XP_954175 TashAT3 (Establishment) [Theileria annulata] 25 5.9
XP_001349438 PfEMP1 (Establishment) [Plasmodium falciparum] 25 6.4
XP_816557 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.8
AAQ81881 p30 (Adhesin) [Cryptosporidium parvum] 25 7.3
>M.Javanica_Scaff10551g059152 on XP_954179 TashAT2 (Establishment) [Theileria annulata]
Length = 1161
Score = 28.1 bits (61), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Query: 19 GRADKHEINKTMPSREHLKRQKNRQRKSNPNSSLQSSDQSVQP 61
GR KH+ P E KR++ R RK P S++S QP
Sbjct: 454 GRPRKHK-----PEPEQPKRKRGRPRKQKPEPESDHSEESTQP 491
>M.Javanica_Scaff10551g059152 on XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3119
Score = 27.3 bits (59), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 22/48 (45%)
Query: 144 TPLSISSEVCVPRKYRKTRDSSVESMDTQSIASTSRSASVFSCSSIES 191
TP S S +CVP + R+ +E + + + C++IE+
Sbjct: 1922 TPPSNSGAICVPPRRRRLYVKDLEKIGDGEVTQVQLRDAFIKCAAIET 1969
>M.Javanica_Scaff10551g059152 on XP_954175 TashAT3 (Establishment) [Theileria annulata]
Length = 994
Score = 25.4 bits (54), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 28 KTMPSREHLKRQKNRQRKSNPNSSLQSSDQSVQP 61
K P E KR++ R RK P S++S QP
Sbjct: 440 KHKPEPEQPKRKRGRPRKQKPEPESDHSEESTQP 473
>M.Javanica_Scaff10551g059152 on XP_001349438 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2265
Score = 25.4 bits (54), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 54/124 (43%), Gaps = 13/124 (10%)
Query: 15 NLCHGRADKH-EINKTMPSREHL-----KRQKNRQRKSNPNSSLQSSDQSVQPEQTDPTI 68
NL H D+H ++ + ++E L + +N N +S + S S P +
Sbjct: 2067 NLFHTWLDRHRDMCEQWNNKEELLDKLKEEWENETHSGNKHSDIPSGKLSDTPSDNNIHS 2126
Query: 69 DLGTQNCPLQGNDQSVQQEQSEHYTRPHILNTSMDVETINENVFSPGKPSSSGRFTFSDH 128
D+ + P G + + + H P++LNT + ++ +N P ++ FT+ D
Sbjct: 2127 DIHPSDIP-SGKQSDIPSDNNIHSDIPYVLNTDVSIQIHMDN------PKTTNEFTYVDS 2179
Query: 129 DINE 132
+ N+
Sbjct: 2180 NPNQ 2183
>M.Javanica_Scaff10551g059152 on XP_816557 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 834
Score = 25.4 bits (54), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 185 SCSSIESQSSTNKRGRPKKGTRKGVGGRPRETVT 218
+C + ++ P+K + KG+G +PR TVT
Sbjct: 682 ACDFGDDGDDDDEEASPEKPSPKGIGKKPRVTVT 715
>M.Javanica_Scaff10551g059152 on AAQ81881 p30 (Adhesin) [Cryptosporidium parvum]
Length = 255
Score = 25.0 bits (53), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 249 TNIDFSTLNTLDFAVTRTTDETSICRRAAMPLYERDDDNRG 289
TN F + TL F V + E+ I A LY+ N G
Sbjct: 67 TNSSFQNIATLRFGVDSCSIESGIASLRAYSLYKNGQYNTG 107
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1038g012234
(81 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351876 PfEMP1 (Establishment) [Plasmodium falciparum] 22 5.6
>M.Javanica_Scaff1038g012234 on XP_001351876 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3164
Score = 22.3 bits (46), Expect = 5.6, Method: Composition-based stats.
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 56 FNSSIDKAISARSHC 70
FN+ +DK S HC
Sbjct: 457 FNNDVDKTFSYSKHC 471
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10385g058623
(51 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10477g058904
(265 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_818708 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.64
XP_813726 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 3.0
XP_001348165 RESA (Others) [plasmodium falciparum] 25 7.9
>M.Javanica_Scaff10477g058904 on XP_818708 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 929
Score = 28.1 bits (61), Expect = 0.64, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Query: 63 NNKYDGFNKNIEGYLRLNEFNPA---KNIFKTEIKSTSEYSPTEQLKRKIVIEIANNQKI 119
N K DG K + F KN+ + ++ + E K ++ + + +N I
Sbjct: 346 NKKRDGEGKAVGSGFTTATFGTGAEQKNVMLVTLPVYAKETQNENKKSELHLWLTDNTHI 405
Query: 120 QNILPEFKKRN-NYYETSILNESSESNDDLKSFKEIIDNYKSK 161
+I P ++ + + +++L +SSES D + +E+I Y+ K
Sbjct: 406 VDIGPVSREDDEDVAASALLYKSSESTTDEEKKEELIALYEKK 448
>M.Javanica_Scaff10477g058904 on XP_813726 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 924
Score = 25.8 bits (55), Expect = 3.0, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 44/101 (43%), Gaps = 4/101 (3%)
Query: 63 NNKYDGFNKNIEGYLRLNEFNPA---KNIFKTEIKSTSEYSPTEQLKRKIVIEIANNQKI 119
N K DG K + F KN+ + ++ E K ++ + + +N I
Sbjct: 345 NKKRDGEGKAVGSGFTTATFGTGAEQKNVMLVTLPVYAKEKQKENKKSELHLWLTDNTHI 404
Query: 120 QNILP-EFKKRNNYYETSILNESSESNDDLKSFKEIIDNYK 159
+I P K + +++L +SSES D + +E+I Y+
Sbjct: 405 VDIGPVSGKDDGDVAASALLYKSSESTTDEEKKEELIALYE 445
>M.Javanica_Scaff10477g058904 on XP_001348165 RESA (Others) [plasmodium falciparum]
Length = 1085
Score = 24.6 bits (52), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 38 KKRIYLFKKNVELKERFVL-KTNDKKNNKYDGFNKNIEGYL 77
KKR KK + ER+ K NDKK KYD +++ GY+
Sbjct: 828 KKRAQSLKKLSSIMERYAGGKRNDKKAKKYD--TQDVVGYI 866
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1038g012226
(301 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_965999 PfEMP1 (Establishment) [Plasmodium falciparum] 25 6.3
XP_001352240 PfEMP1 (Establishment) [Plasmodium falciparum] 25 7.1
>M.Javanica_Scaff1038g012226 on XP_965999 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1325
Score = 25.0 bits (53), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 20/106 (18%)
Query: 191 KGGSRSYISIEKRANSAPVIENKETELSQNGALEMNEFNAKEVNNFLHVMNRFISIGGLS 250
KG S YI I+K NS I ++E S + K N + +
Sbjct: 741 KGLSEKYIKIKKSKNSGVNIPSEECAAS---------YVTKHCNGCI-----------CN 780
Query: 251 MKDLMDVHGNTMNSQERINFIYAVKTSSTERMFNIVKDIMNIFEMN 296
++D+ D+H N N E + + + T++ +++I N E+N
Sbjct: 781 LRDMEDIHKNINNQNELMKEMINIIKFDTDQYRTQLQNISNSMEIN 826
>M.Javanica_Scaff1038g012226 on XP_001352240 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1315
Score = 25.0 bits (53), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 20/106 (18%)
Query: 191 KGGSRSYISIEKRANSAPVIENKETELSQNGALEMNEFNAKEVNNFLHVMNRFISIGGLS 250
KG S YI I+K NS I ++E S + K N + +
Sbjct: 731 KGLSEKYIKIKKSKNSGVNIPSEECAAS---------YVTKHCNGCI-----------CN 770
Query: 251 MKDLMDVHGNTMNSQERINFIYAVKTSSTERMFNIVKDIMNIFEMN 296
++D+ D+H N N E + + + T++ +++I N E+N
Sbjct: 771 LRDMEDIHKNINNQNELMKEMINIIKFDTDQYRTQLQNISNSMEIN 816
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff105g001982
(113 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10526g059067
(179 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_807279 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 6.4
XP_804171 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 7.9
XP_812615 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 9.9
>M.Javanica_Scaff10526g059067 on XP_807279 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 872
Score = 23.9 bits (50), Expect = 6.4, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 4/44 (9%)
Query: 71 LKVTSKTKDLQNTKIILEVGGIKCEASIKNNKGVECEIPHKEIN 114
+ T K K+++ +I + E S +NN PH IN
Sbjct: 5 ISFTQKKKEVKQARI----ATVHSEGSQRNNNSTHTHRPHTRIN 44
>M.Javanica_Scaff10526g059067 on XP_804171 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 787
Score = 23.9 bits (50), Expect = 7.9, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 17/90 (18%)
Query: 3 IFTSTLLIISMTFIPLTEGMEKGNQSGSKNASGPSTSPCKIGKLENPYPNLLKLQHQTLP 62
+FTS +L+ + + + G +S S NA P T + + Q LP
Sbjct: 43 VFTSAVLLFLVVMMCCSGGASNAVKSNSGNAQLPHTVDLFVPQTT-----------QVLP 91
Query: 63 SKEDKANMLKVTSKTKDLQNTKIILEVGGI 92
+K + VT T+D N+ I+ GG+
Sbjct: 92 NKGTNS----VT--TRDSFNSPSIVSAGGV 115
>M.Javanica_Scaff10526g059067 on XP_812615 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1116
Score = 23.5 bits (49), Expect = 9.9, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 36/84 (42%), Gaps = 8/84 (9%)
Query: 63 SKEDKANMLKVTSKTKDLQNTKIILEV-----GGIKCEASIKNNKGVECEIPHKEINKGP 117
+K+D A L T+ L+ K +++ G ++ S + V + P K + GP
Sbjct: 507 NKKDGAYNLVAVRLTEKLERIKEVVKTWKDLDGALQ---SCSSGSSVTVDFPKKGMCNGP 563
Query: 118 QSGTMIFSYAEGKEVVVPFKDVHL 141
+ + + G V ++D +L
Sbjct: 564 VTTERLVGFLSGNSTVTEWRDEYL 587
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10523g059060
(100 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_819563 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.57
XP_806844 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.67
XP_819383 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.0
XP_805509 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.2
XP_804553 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.2
XP_805203 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.4
XP_807111 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.5
XP_809825 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.6
XP_816557 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.1
XP_805259 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.8
XP_805383 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 7.2
XP_808590 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 7.8
XP_804542 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 8.5
>M.Javanica_Scaff10523g059060 on XP_819563 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 720
Score = 25.8 bits (55), Expect = 0.57, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 31 EWLPGHVQSEGGLFLLDRRALSEGEVL-LFRTKKSRHRAIPVMS--SQKQLNFGN 82
E+ G + S+G L LL RRA +G V+ L R + V+S SQK + F +
Sbjct: 434 EFASGLLYSDGNLHLLQRRANDKGRVISLSRLTEELSTIKSVLSTWSQKDVFFSS 488
>M.Javanica_Scaff10523g059060 on XP_806844 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 740
Score = 25.4 bits (54), Expect = 0.67, Method: Composition-based stats.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 39 SEGGLFLLDRRALSEGEVL 57
S+G L LL RRA EG V+
Sbjct: 442 SDGNLHLLQRRATGEGRVI 460
>M.Javanica_Scaff10523g059060 on XP_819383 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 753
Score = 23.5 bits (49), Expect = 3.0, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Query: 39 SEGGLFLLDRRALSEGEVL-LFRTKKSRHRAIPVMS--SQKQLNF 80
S+G L LL RR EG V+ L R + V+S SQK + F
Sbjct: 460 SDGSLHLLQRRGNGEGSVMSLSRLTEELSTINSVLSTWSQKDIFF 504
>M.Javanica_Scaff10523g059060 on XP_805509 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 777
Score = 23.5 bits (49), Expect = 3.2, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 14 EKQERREQQQHDETNFAEWLPGHVQSEGGLFLLDRRALSEGE 55
EK + +ET + +P V+ +GG+F + L EGE
Sbjct: 78 EKHFVWRDKNGEETVSSLHVPSLVEVDGGVFTVAEAQLKEGE 119
>M.Javanica_Scaff10523g059060 on XP_804553 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 827
Score = 23.5 bits (49), Expect = 3.2, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 39 SEGGLFLLDRRALSEGEVL-LFRTKKSRHRAIPVMS--SQKQLNFGN 82
S+G L LL RRA EG + L R + V+S SQK + F +
Sbjct: 459 SDGKLHLLQRRASGEGSAISLSRLTEELKEIESVLSTWSQKDVFFSS 505
>M.Javanica_Scaff10523g059060 on XP_805203 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 844
Score = 23.5 bits (49), Expect = 3.4, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 39 SEGGLFLLDRRALSEGEVL-LFRTKKSRHRAIPVMS--SQKQLNFGN 82
S+G L LL RR SEG + L R + V+S SQK + F +
Sbjct: 456 SDGKLHLLQRRVSSEGSAISLSRLTEKLKEIESVLSTWSQKDVFFSS 502
>M.Javanica_Scaff10523g059060 on XP_807111 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 794
Score = 23.5 bits (49), Expect = 3.5, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 28 NFAEW--LPGHVQSEGGLFLLDRRALSEGEVL-LFRTKKSRHRAIPVMSSQKQ 77
N A+W + S+G L LL RR EG V+ L R + + V+S+ Q
Sbjct: 431 NAAKWELASSLLYSDGKLHLLQRRDSGEGSVISLSRLTEELKKIESVLSTWAQ 483
>M.Javanica_Scaff10523g059060 on XP_809825 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 730
Score = 23.5 bits (49), Expect = 3.6, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 25 DETNFAEWLPGHVQSEGGLFLLDRRALSEGEVLLF 59
D E+ + S+G L LL RR EG + F
Sbjct: 426 DNAGKGEFASALLYSDGKLHLLQRRGNGEGSAISF 460
>M.Javanica_Scaff10523g059060 on XP_816557 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 834
Score = 23.1 bits (48), Expect = 4.1, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 18/78 (23%)
Query: 39 SEGGLFLLDRRALSEGEVL-LFRTKKSRHRAIPVMSSQKQLN----------------FG 81
S+G L LL RR EG V+ L R + V+S+ Q +
Sbjct: 458 SDGKLHLLQRRVSGEGRVISLSRLTEELKEIESVLSTWAQKDAFFSSFSIPTAGLVAVLS 517
Query: 82 NSQEKNDINNFEVFRCFN 99
N+ ND + E +RC N
Sbjct: 518 NASANNDTWDDE-YRCLN 534
>M.Javanica_Scaff10523g059060 on XP_805259 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 800
Score = 22.7 bits (47), Expect = 5.8, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 39 SEGGLFLLDRRALSEGEVL-LFRTKKSRHRAIPVMSSQKQ 77
S+G L LL RR EG V+ L R + V+S+ Q
Sbjct: 437 SDGKLHLLQRRVSGEGSVISLSRLTEELKEIESVLSTWAQ 476
>M.Javanica_Scaff10523g059060 on XP_805383 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 414
Score = 22.3 bits (46), Expect = 7.2, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 39 SEGGLFLLDRRALSEGEVL 57
S+G L LL RR EG V+
Sbjct: 100 SDGKLHLLQRRVSGEGSVI 118
>M.Javanica_Scaff10523g059060 on XP_808590 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 574
Score = 22.3 bits (46), Expect = 7.8, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 39 SEGGLFLLDRRALSEGEVL-LFRTKKSRHRAIPVMS--SQKQLNFGN 82
S+G L LL RR EG + L R + + V+S SQK + F +
Sbjct: 192 SDGKLHLLQRRGSGEGSAISLSRLTEELKKIESVLSTWSQKDVFFSS 238
>M.Javanica_Scaff10523g059060 on XP_804542 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 813
Score = 22.3 bits (46), Expect = 8.5, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 22 QQHDETNFAEWLPGHVQSEGGLFLLDRRALSEG 54
++ DET + + P V+ GG+F L +G
Sbjct: 87 KKEDETVDSLYAPSFVEVNGGVFAFAEALLKDG 119
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1059g012425
(109 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10515g059033
(84 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_845633 VSG (Establishment) [Trypanosoma brucei] 23 3.0
>M.Javanica_Scaff10515g059033 on XP_845633 VSG (Establishment) [Trypanosoma brucei]
Length = 488
Score = 23.1 bits (48), Expect = 3.0, Method: Composition-based stats.
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 30 TAKRKVGEAVVRHLGTD 46
T ++KV A+ RH G D
Sbjct: 289 TTQKKVANAICRHRGAD 305
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10483g058931
(60 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_803376 VSG (Establishment) [Trypanosoma brucei] 23 1.5
>M.Javanica_Scaff10483g058931 on XP_803376 VSG (Establishment) [Trypanosoma brucei]
Length = 503
Score = 23.1 bits (48), Expect = 1.5, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 11 SQQKIHSAPQLITNTTTTIRQPQPV 35
+Q +IH AP++I + + RQ + V
Sbjct: 16 AQAQIHEAPKIIASACDSTRQTEHV 40
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10448g058814
(103 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_819146 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.52
XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum] 23 6.8
>M.Javanica_Scaff10448g058814 on XP_819146 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 825
Score = 25.8 bits (55), Expect = 0.52, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 40 NTTLISCNYYNPTDD-SANTLLYERGNPCLKDSDCDYYANSKCDTSCGLCKAALDA 94
NT ++ + DD +A++LLY+ GN ++ Y K ++S G+ L A
Sbjct: 391 NTHIVDIGSVSSDDDVAASSLLYKSGNNNDEEELITLYEKKKGESSSGMVSVLLTA 446
>M.Javanica_Scaff10448g058814 on XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2238
Score = 22.7 bits (47), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 58 TLLYERGNPCLKDSDCDY 75
TL Y++ NPC K SD +
Sbjct: 78 TLGYDKENPCKKRSDVRF 95
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10357g058522
(272 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349033 PfEMP1 (Establishment) [Plasmodium falciparum] 30 0.17
XP_001351321 PfEMP1 (Establishment) [Plasmodium falciparum] 30 0.18
XP_803379 VSG (Establishment) [Trypanosoma brucei] 28 0.78
XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum] 27 2.3
XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum] 25 4.7
BAC44837 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 25 7.8
>M.Javanica_Scaff10357g058522 on XP_001349033 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2064
Score = 30.0 bits (66), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 16/115 (13%)
Query: 1 MQLFEEYLNIRRLFLFAFLLLYIPSNSYSCLLCPL-HIPARPK----------PLDQFRV 49
QL E++ N R ++ L + P ++ P HI K P + V
Sbjct: 235 FQLREDWWNANRNDIWKALTCHAPPDAQYTKKGPHNHITESNKGQCRCFSGDPPTNMDYV 294
Query: 50 PSIQKLIRTSETIEWLC-QNGSRLSTISPECRSEVAHLFCSLTGF--VASLKAEE 101
P Q L E E C + +L CR E + L+CSL G+ A+++A +
Sbjct: 295 P--QYLRWFEEWAEEFCRKRKKKLQNAQKFCRDESSKLYCSLNGYDCKATIRAND 347
>M.Javanica_Scaff10357g058522 on XP_001351321 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3467
Score = 30.0 bits (66), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 53/133 (39%), Gaps = 25/133 (18%)
Query: 71 RLSTISPECRSEVAHLFCSLTGFVASLKAEECPGQENKEQCVKC------------RKEN 118
+L I CR++ L+CS G+ + + E+ + +C C +++N
Sbjct: 324 KLRKIKDACRNDKERLYCSQNGYDCTKRIEKGSSCSRENKCTGCSNKCVDYDFWLEKQQN 383
Query: 119 ERLYSVNKWIMTWVDSVGKMPSGISDGNYHWLGDY--EQCQRLKTQG---------LFNG 167
E +K+ V K P IS+ N + +Y E + LK Q L NG
Sbjct: 384 EFKIQKDKYDKEIETYVNKTP--ISNSNSNTKKEYYKEFYEELKKQYGSVKNFLQLLNNG 441
Query: 168 RYCLLEFHVPGAV 180
RYC + A+
Sbjct: 442 RYCQEKIEEEDAI 454
>M.Javanica_Scaff10357g058522 on XP_803379 VSG (Establishment) [Trypanosoma brucei]
Length = 532
Score = 27.7 bits (60), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 81 SEVAHLFCSLTGFVASLKAEECPGQENKEQCVK 113
+++ HL TG++ +A C G +N CVK
Sbjct: 296 AKLVHLTSDGTGYIGVYQATGCTGADNAGMCVK 328
>M.Javanica_Scaff10357g058522 on XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2980
Score = 26.6 bits (57), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 71 RLSTISPECRSEVAHLFCSLTGF 93
+L I CR+E L+CSL G+
Sbjct: 328 KLKNIKDVCRNESKPLYCSLNGY 350
>M.Javanica_Scaff10357g058522 on XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3119
Score = 25.4 bits (54), Expect = 4.7, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 29/79 (36%), Gaps = 14/79 (17%)
Query: 53 QKLIRTSETIEWLCQNGSRLSTISPECRSEVAHLFCSLTGFVASLKAEECPGQENKEQCV 112
Q+L +E EW C+ SRL C C G + + EC KE C
Sbjct: 998 QRLRWMTEWAEWYCKEQSRLYDKLKVCEE------CMRKGESCTKGSGEC--ATCKEACE 1049
Query: 113 KCRKENERLYSVNKWIMTW 131
+ KE + KW W
Sbjct: 1050 EYNKE------IKKWEQQW 1062
Score = 25.0 bits (53), Expect = 6.0, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 48/128 (37%), Gaps = 36/128 (28%)
Query: 71 RLSTISPECRSEVAHLFCSLTGF--VASLKAEECPGQENKEQCVKC-------------- 114
+L + CR E +CSL GF ++ ++ G+ N C C
Sbjct: 320 KLENVKNACRDEKKRKYCSLNGFDCTQTIWKKKVFGRGN--DCTNCSFKCFPYEIWLGNQ 377
Query: 115 ----RKENERLYSVNKWIMTWVDSVGKMPSGISDGNYHWLGDYEQCQRLKTQG------- 163
RK+ E+ K I +V + G S I++G Y D+ + KT
Sbjct: 378 REAFRKQKEKY---AKEIEAYVTNRGIPKSSINNGYYK---DFYNKLKEKTYNTVDEFIN 431
Query: 164 -LFNGRYC 170
L GRYC
Sbjct: 432 LLNEGRYC 439
>M.Javanica_Scaff10357g058522 on BAC44837 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 1566
Score = 24.6 bits (52), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 114 CRKENERLYSVNKWIMTW 131
CRK +E +N+WI+ W
Sbjct: 274 CRKPDENEPQINRWILEW 291
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10386g058625
(83 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_806668 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.5
XP_001608664 variant erythrocyte surface antigen-1, beta subuni... 22 9.4
>M.Javanica_Scaff10386g058625 on XP_806668 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 779
Score = 23.9 bits (50), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 56 NVTSQNLLFGMGMTSTNTNAWQPITTTQ 83
N LLF G T +++ W+P T Q
Sbjct: 620 NEKKWELLFSGGTTKEHSSTWEPEKTYQ 647
>M.Javanica_Scaff10386g058625 on XP_001608664 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1116
Score = 21.6 bits (44), Expect = 9.4, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 64 FGMGMTSTNTNAWQPITTTQ 83
+G G++ ++TN W+ TQ
Sbjct: 646 YGSGVSGSSTNDWRCTAETQ 665
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10411g058695
(207 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_818883 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.9
XP_812613 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.9
>M.Javanica_Scaff10411g058695 on XP_818883 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 980
Score = 26.2 bits (56), Expect = 1.9, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 137 ENNNIYETSILYKSHKNFKLFEENIKNYKNKLLSSYWTEINLTRYKIELLE-KQKVE 192
EN N+ +++LY + + L E K KL SY +Y I L+ +K+E
Sbjct: 404 ENENVAASTLLYATVEAQSLEEGEPNKEKEKLYCSYEVAAEGDKYSIAFLDLTEKLE 460
>M.Javanica_Scaff10411g058695 on XP_812613 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1038
Score = 25.0 bits (53), Expect = 3.9, Method: Composition-based stats.
Identities = 9/30 (30%), Positives = 19/30 (63%)
Query: 4 FNSIILIYLIILLKIQCAGKLIHVELKIKD 33
FNS++L++L++++ G H E K ++
Sbjct: 43 FNSVVLLFLVVMMMCCGIGGASHAEGKTRN 72
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10567g059196
(164 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum] 27 0.60
XP_804836 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.3
XP_817637 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.5
XP_843647 VSG (Establishment) [Trypanosoma brucei] 25 1.9
XP_820143 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.2
XP_001350954 RESA (Others) [Plasmodium falciparum] 25 2.3
XP_816886 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.8
AAT84606 ROM5 (Establishment) [Toxoplasma gondii] 24 4.3
XP_816570 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 8.0
>M.Javanica_Scaff10567g059196 on XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2238
Score = 26.9 bits (58), Expect = 0.60, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 24 CKCPQNG-GKGLYKRR---YKRGNFC-SCTGGGIRHRKEHSEGSGHGGTRSSGRISHGSG 78
CK NG GK + + ++ ++C +C+ G++ +K H + + +G +G+I+ GS
Sbjct: 1347 CKNNDNGEGKIEFNEKSETFQHTDYCGTCSLIGVKCKKGHCDNAANGKDCPTGKITAGSF 1406
Query: 79 RSELEVTGRQSHDGRSGGE 97
+E + G GE
Sbjct: 1407 GNEGDSIGNVDMHVSDNGE 1425
>M.Javanica_Scaff10567g059196 on XP_804836 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 919
Score = 25.8 bits (55), Expect = 1.3, Method: Composition-based stats.
Identities = 13/25 (52%), Positives = 13/25 (52%)
Query: 57 EHSEGSGHGGTRSSGRISHGSGRSE 81
E SEGS S GR SHG G E
Sbjct: 730 EASEGSYAAAVSSGGRGSHGPGNEE 754
>M.Javanica_Scaff10567g059196 on XP_817637 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 986
Score = 25.8 bits (55), Expect = 1.5, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 14/30 (46%)
Query: 57 EHSEGSGHGGTRSSGRISHGSGRSELEVTG 86
E EGS S GR SHG+ E E G
Sbjct: 798 EAPEGSDAAAVSSGGRGSHGTREEETETDG 827
>M.Javanica_Scaff10567g059196 on XP_843647 VSG (Establishment) [Trypanosoma brucei]
Length = 543
Score = 25.4 bits (54), Expect = 1.9, Method: Composition-based stats.
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 7 FWILFLLIFVNISIERNCKCPQNGGK 32
W++FLL+F ++++ N K G K
Sbjct: 21 LWVMFLLLFHALNVDGNSKGAIQGAK 46
>M.Javanica_Scaff10567g059196 on XP_820143 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 869
Score = 25.4 bits (54), Expect = 2.2, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 10/70 (14%)
Query: 48 TGGGIRHRKEHSEGSG-----HGGTRSSGRISHGSGRSELEVTGRQSHDGRSGGEIVQES 102
+GGG + S GS T SS + S G S ++ +S DG +
Sbjct: 739 SGGGRPEEQRQSLGSSGVNGVSAPTVSSAKTSSGGEGSATQLVSEKSSDGHKNVD----- 793
Query: 103 GGYHGHGEPS 112
GG+ GEP+
Sbjct: 794 GGFFSDGEPT 803
>M.Javanica_Scaff10567g059196 on XP_001350954 RESA (Others) [Plasmodium falciparum]
Length = 654
Score = 25.0 bits (53), Expect = 2.3, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 86 GRQSHDGRSGGEIVQESGGYHGHGEPSHWGPSYE---GTSNVSDYGVGYGGGY 135
G +HDG G ++ G G+G + + P + G++ + +Y +G GY
Sbjct: 275 GGSAHDGSHGNLRGHDNKGSEGYGYEAPYNPGFNGAPGSNGMQNYVPPHGAGY 327
>M.Javanica_Scaff10567g059196 on XP_816886 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 905
Score = 24.6 bits (52), Expect = 3.8, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 14/30 (46%)
Query: 57 EHSEGSGHGGTRSSGRISHGSGRSELEVTG 86
E SEGS S GR HG+ E E G
Sbjct: 717 EASEGSYAAAVSSGGRGFHGTREEETETDG 746
>M.Javanica_Scaff10567g059196 on AAT84606 ROM5 (Establishment) [Toxoplasma gondii]
Length = 255
Score = 24.3 bits (51), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 111 PSHWGPSYEGTSNVSDYGVGYGGGYLGGSMYGEDKKK 147
PSH P E T V +G G LG S++ ++ K
Sbjct: 103 PSHDAPESERTPRVISFGYGACEHNLGVSLFRREETK 139
>M.Javanica_Scaff10567g059196 on XP_816570 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 718
Score = 23.5 bits (49), Expect = 8.0, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 94 SGGEIVQESGGYHGHGEPSHWGPSYEGTSNVSDY 127
+GG ++ +GG H +P+H Y V+ Y
Sbjct: 113 AGGVMIAFAGGEKRHNDPAHPSERYGSVDIVAGY 146
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10366g058556
(199 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_650534 HgI (Adhesin) [Entamoeba histolytica] 25 4.3
>M.Javanica_Scaff10366g058556 on XP_650534 HgI (Adhesin) [Entamoeba histolytica]
Length = 1207
Score = 24.6 bits (52), Expect = 4.3, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 28/67 (41%)
Query: 17 VSNVYCDLVGHGKHELVNGKIVKMRGNTKMAVGWARDSIGWARDGDKVQSTFHPNETMCF 76
V+N Y + + + E + GK++ R +++ + + D + P M
Sbjct: 159 VTNKYAEGMSPCRFEYIGGKVITFRSSSEFSDNFITDYKNNNITKCHASTVLPPTNNMAV 218
Query: 77 GFVVHCD 83
G VV+ D
Sbjct: 219 GIVVNLD 225
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10471g058888
(79 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_811148 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 0.95
XP_001608795 variant erythrocyte surface antigen-1, alpha subun... 24 1.4
XP_001352170 MSP1 (Invasion) [Plasmodium falciparum] 22 7.2
>M.Javanica_Scaff10471g058888 on XP_811148 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 564
Score = 24.3 bits (51), Expect = 0.95, Method: Composition-based stats.
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 10 EDIYRGLLTQPVTETGN 26
ED + G+ +Q +TETGN
Sbjct: 117 EDTFTGIASQLLTETGN 133
>M.Javanica_Scaff10471g058888 on XP_001608795 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1323
Score = 23.9 bits (50), Expect = 1.4, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 41 RQRVNNELKNI-NYNQELRRYLHMLKEQKSNTNRCGSS 77
+ +++ +K + N ELR+ + LK++K N CG S
Sbjct: 754 KNKISAAIKGVRNVLDELRKGVEGLKQEKENEIMCGLS 791
>M.Javanica_Scaff10471g058888 on XP_001352170 MSP1 (Invasion) [Plasmodium falciparum]
Length = 1720
Score = 21.9 bits (45), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 19/27 (70%), Gaps = 3/27 (11%)
Query: 44 VNNELKNIN---YNQELRRYLHMLKEQ 67
+NN+L+++ Y +E+ YLH LKE+
Sbjct: 868 MNNDLQHLFFELYQKEMIYYLHKLKEE 894
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10373g058589
(65 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_804885 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.3
XP_813677 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.6
XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum] 23 2.5
AAD40228 P270 (Establishment) [Trichomonas vaginalis] 22 4.6
AAC97385 P270 (Establishment) [Trichomonas vaginalis] 22 4.7
>M.Javanica_Scaff10373g058589 on XP_804885 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 446
Score = 23.5 bits (49), Expect = 1.3, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 15/34 (44%)
Query: 31 GPQSSPAKESGTVRLSSPRRIEWYGFCVETKTPV 64
G +S + G L S ++W V KTPV
Sbjct: 61 GGATSAKENGGNSDLRSVEELQWVDLFVPQKTPV 94
>M.Javanica_Scaff10373g058589 on XP_813677 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 945
Score = 23.1 bits (48), Expect = 1.6, Method: Composition-based stats.
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 7 IRIFHPKNVLTPPYV 21
I F+P NVL PP V
Sbjct: 735 IGAFNPNNVLIPPVV 749
>M.Javanica_Scaff10373g058589 on XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3346
Score = 22.7 bits (47), Expect = 2.5, Method: Composition-based stats.
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 31 GPQSSPAKESGTVRLSS 47
GP SP +ESG R +S
Sbjct: 2789 GPSGSPTEESGEPRENS 2805
>M.Javanica_Scaff10373g058589 on AAD40228 P270 (Establishment) [Trichomonas vaginalis]
Length = 255
Score = 21.6 bits (44), Expect = 4.6, Method: Composition-based stats.
Identities = 8/23 (34%), Positives = 16/23 (69%)
Query: 39 ESGTVRLSSPRRIEWYGFCVETK 61
++G+ + SP++IE +C+E K
Sbjct: 220 KTGSDEIISPQKIENIFYCIEPK 242
>M.Javanica_Scaff10373g058589 on AAC97385 P270 (Establishment) [Trichomonas vaginalis]
Length = 255
Score = 21.6 bits (44), Expect = 4.7, Method: Composition-based stats.
Identities = 8/23 (34%), Positives = 16/23 (69%)
Query: 39 ESGTVRLSSPRRIEWYGFCVETK 61
++G+ + SP++IE +C+E K
Sbjct: 95 KTGSDEIISPQKIENIFYCIEPK 117
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1058g012416
(88 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10592g059269
(556 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_811004 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.36
XP_810496 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 1.1
XP_805786 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 3.3
XP_001349030 PfEMP1 (Establishment) [Plasmodium falciparum] 27 3.3
XP_805911 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 5.0
XP_846273 VSG (Establishment) [Trypanosoma brucei] 26 5.9
XP_807802 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 6.0
XP_816821 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 6.0
XP_001350413 PfEMP1 (Establishment) [Plasmodium falciparum] 26 6.3
XP_812792 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 6.4
XP_001349437 PfEMP1 (Establishment) [Plasmodium falciparum] 26 6.4
XP_001609566 variant erythrocyte surface antigen-1, beta subuni... 26 7.7
>M.Javanica_Scaff10592g059269 on XP_811004 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 933
Score = 30.0 bits (66), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 17/73 (23%)
Query: 444 DFALFAFLNQFFEFPLNIPEFKELFTPEKLSNEEKELIA---KRKGETENSIKINGNLFK 500
D A A L++ E N E+KELIA K+KG+ E+S+ + L
Sbjct: 410 DVAASALLHKSVEGETN--------------EEKKELIALYEKKKGDAESSLGMVSVLLT 455
Query: 501 NYIKRIKNILGKF 513
++R+K++L +
Sbjct: 456 EQLQRVKDVLATW 468
>M.Javanica_Scaff10592g059269 on XP_810496 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 943
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Query: 471 EKLSNEEK-ELIA---KRKGETENSIKINGNLFKNYIKRIKNILGKF 513
E +NEEK ELIA K+KG+ E+S+ + L ++R+K +L +
Sbjct: 431 EGETNEEKKELIALYEKKKGDAESSLGMVSVLLTEQLQRVKKVLATW 477
>M.Javanica_Scaff10592g059269 on XP_805786 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 581
Score = 26.9 bits (58), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 4/46 (8%)
Query: 472 KLSNEEKE-LIA---KRKGETENSIKINGNLFKNYIKRIKNILGKF 513
K NE+KE LIA K+KG+ E+S+ + +KR+K++L +
Sbjct: 437 KTDNEKKEGLIALYEKKKGDAESSLGMVSVRLTAQLKRVKDVLATW 482
>M.Javanica_Scaff10592g059269 on XP_001349030 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 26.9 bits (58), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Query: 102 DGAEKIIEEVRKKGNKKLSDEHDDNIRKFATRTLLKTLIADRTFRRDLP-----HATISK 156
D KI E ++K+ N KL DD IR++ +T+ T DL HAT
Sbjct: 220 DNLRKIFENIKKENNSKLKSLTDDQIREYWWTENRETVWKAMTCSEDLKNSSYFHATCID 279
Query: 157 NNSETQ 162
+++Q
Sbjct: 280 GKNQSQ 285
>M.Javanica_Scaff10592g059269 on XP_805911 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 522
Score = 26.2 bits (56), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 4/46 (8%)
Query: 472 KLSNEEKE-LIA---KRKGETENSIKINGNLFKNYIKRIKNILGKF 513
K NE+KE LIA K+KG+ E+S+ + +KR+K++L +
Sbjct: 436 KTDNEKKEGLIALYEKKKGDAESSLGMVSVRLTAQLKRVKDLLATW 481
>M.Javanica_Scaff10592g059269 on XP_846273 VSG (Establishment) [Trypanosoma brucei]
Length = 490
Score = 26.2 bits (56), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 28/70 (40%)
Query: 211 PGSSFLSRTIAHLKLNHNNSPKKGLGGLDWMLKDEGVREQLIPVIPEAFLDPEIQINISK 270
P S F SRT+ + N S G G+ L+ E + +I A+L+ + N
Sbjct: 145 PASKFTSRTLGGINANACCSSNNGEEGVKTDLEHEPKEPEPTKLITHAYLEAKCDSNPGA 204
Query: 271 EESMSDEYFD 280
+ + D
Sbjct: 205 PATCHNAAVD 214
>M.Javanica_Scaff10592g059269 on XP_807802 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 805
Score = 26.2 bits (56), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Query: 476 EEKELIA--KRKGETENSIKINGNLFKNYIKRIKNIL 510
+E+ELIA ++KG E+S+ I L +KR+K +L
Sbjct: 413 KEEELIALYEKKGGGESSLGIVSVLLTAQLKRVKEVL 449
>M.Javanica_Scaff10592g059269 on XP_816821 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 782
Score = 26.2 bits (56), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 9/54 (16%)
Query: 475 NEEKELIA---KRKGETENSIKINGNLFKNYIKRIKNILGKFGDDEVWRIMKQR 525
N ++ LIA K+KG E+S+ + L +KR+K +L WR + +R
Sbjct: 440 NNDERLIALYEKKKGGGESSLGMVSVLLTEQLKRVKEVL------ATWREVDER 487
>M.Javanica_Scaff10592g059269 on XP_001350413 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2860
Score = 26.2 bits (56), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 8/58 (13%)
Query: 497 NLFKNYIKRIKNILGKFGDDE----VWRIMKQRPWPLN----FKLIEEEENEIFGDKY 546
++FKN +++ I GK+ DDE ++++++ W N +K + E N I D +
Sbjct: 960 SVFKNIKEKLPGIQGKYADDERNIPAYKLLREDWWEANRRQVWKAMTCENNGIKCDAH 1017
>M.Javanica_Scaff10592g059269 on XP_812792 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 879
Score = 26.2 bits (56), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 9/75 (12%)
Query: 467 LFTPEKLSNEEKELIA---KRKGETENSIKINGNLFKNYIKRIKNILGKFGDDEVWRIMK 523
L+ N+++ELIA K+KG + S + L +KR+K +L W+ +
Sbjct: 430 LYKSGTGDNKKEELIALYEKKKGSEKTSPGMVSVLLTEQLKRVKKVL------ATWKEVD 483
Query: 524 QRPWPLNFKLIEEEE 538
R L LI +E+
Sbjct: 484 GRVSLLCTSLIAQED 498
>M.Javanica_Scaff10592g059269 on XP_001349437 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2231
Score = 26.2 bits (56), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 40/100 (40%), Gaps = 18/100 (18%)
Query: 102 DGAEKIIEEVRKKGNKKLSDEHDDNIRKF---ATR-TLLKTLIADRT--------FRRDL 149
D +KI E ++K+ N+KL DD IR++ A R T+ K + D FR
Sbjct: 215 DKLKKIFENIKKENNEKLKSLTDDQIREYWWTANRETVWKAITCDEENKLGGYLYFR--- 271
Query: 150 PHATISKN-NSETQIASSSLSNSAPATPKGGIPTRKRFSP 188
T N S TQ TP +PT + P
Sbjct: 272 --GTCGDNEKSVTQARDKCRCKKKDNTPDDQVPTYFDYVP 309
>M.Javanica_Scaff10592g059269 on XP_001609566 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1062
Score = 25.8 bits (55), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 12/85 (14%)
Query: 393 KRLREITGKNINEVEVFNEFKDKVKSLGIIKKL--------TEAEAKNNFLHGNIPTLTD 444
K +RE GK + E+ ++ + D + G+IK L E ++ G++ TL
Sbjct: 765 KGVREALGKEVKELSLYMDGNDDGDNTGVIKALKAWNKEGTCEKDSHTGVNEGSLKTL-- 822
Query: 445 FALFAFLNQFFEF--PLNIPEFKEL 467
+ Q + PL+ ++ +L
Sbjct: 823 YGCTKGTGQCCPYLSPLSGQQYGQL 847
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10357g058523
(50 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum] 23 1.4
>M.Javanica_Scaff10357g058523 on XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2858
Score = 22.7 bits (47), Expect = 1.4, Method: Composition-based stats.
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 24 LNNNCRTHRAVSIDT 38
L NCRT R S+DT
Sbjct: 2014 LQENCRTDRNESLDT 2028
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10494g058961
(96 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum] 23 3.7
XP_818092 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.6
XP_818477 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.6
XP_001609667 variant erythrocyte surface antigen-1, alpha subun... 22 7.1
>M.Javanica_Scaff10494g058961 on XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1711
Score = 23.1 bits (48), Expect = 3.7, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 16 ILYLNSAFSYTYISYHKPLNKEQQESERIQSIVSKCYQNSCRQ 58
+ Y S +S+ Y S LN+ + ER++S ++ CR+
Sbjct: 585 VYYPISYYSFFYGSIIDMLNESIEWRERLKSCINDAKLGKCRK 627
>M.Javanica_Scaff10494g058961 on XP_818092 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 884
Score = 22.7 bits (47), Expect = 4.6, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 29 SYHKPLNKEQQESERIQSIVSKCYQNSCRQWVLEC 63
S H PL + S ++ Y N+ ++W+L C
Sbjct: 597 STHIPLMGAKTNSAENTVLLGLSYSNNEKKWMLLC 631
>M.Javanica_Scaff10494g058961 on XP_818477 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 869
Score = 22.7 bits (47), Expect = 5.6, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 31 HKPLNKEQQESERIQSIVSKCYQNSCRQWVLEC 63
H PL + +V Y+N ++W+L C
Sbjct: 579 HIPLIGAKMNDSEKTVLVGLSYKNKEKKWILLC 611
>M.Javanica_Scaff10494g058961 on XP_001609667 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1303
Score = 22.3 bits (46), Expect = 7.1, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 29 SYHKPLNKEQQESERIQSIVSKCYQNSCRQWVLECHWFCDAIRGLKDYER 78
SY P N E E+ N ++ +CH F D++ G+ D R
Sbjct: 1155 SYGNPFNLEGYRQEKKGEGDYSIMDNR-QKGTKKCHQFLDSLNGVIDKNR 1203
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10511g059018
(224 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum] 32 0.040
XP_829788 VSG (Establishment) [Trypanosoma brucei] 25 4.2
>M.Javanica_Scaff10511g059018 on XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3346
Score = 31.6 bits (70), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Query: 99 ISILHPPGQDKLSGESAAERWNPAHG---VRSILLSVISMLNEPNISSPANVDASVSYRK 155
I+IL P G K+ E E+W HG + +L ++ + L+E + D S
Sbjct: 1361 INILFPNGVRKIPNEKTREKWWTDHGPEIWKGMLCALTNGLSESEKKTKIFDDYSHDKVN 1420
Query: 156 YKENGNKEFPDIIKK 170
+NGN D KK
Sbjct: 1421 QSKNGNPSLEDFAKK 1435
>M.Javanica_Scaff10511g059018 on XP_829788 VSG (Establishment) [Trypanosoma brucei]
Length = 473
Score = 25.0 bits (53), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 12/79 (15%)
Query: 112 GESAAERWNPAHGVRSILLSVISMLNEPNISSPANVDASVSYRKYKENGNKEFPDIIKKM 171
G +AAER N H + + S N+ N N D SY E K
Sbjct: 382 GTAAAERLNE-H--KELSESAEQACNKLNSEQKCNADPKCSY---------EIESDGTKK 429
Query: 172 VEKSKTEAAKDGVKVPETE 190
+ + T+A K GV +P+T+
Sbjct: 430 CKYNATKAEKSGVSLPQTQ 448
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10944g060310
(99 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_828095 VSG (Establishment) [Trypanosoma brucei] 23 5.4
>M.Javanica_Scaff10944g060310 on XP_828095 VSG (Establishment) [Trypanosoma brucei]
Length = 517
Score = 22.7 bits (47), Expect = 5.4, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 8 MCVSYLHAVLHGGEGTSKPSSDHNEIEDSILQEYPKYA 45
+CV Y H + G G ++ + N +E + L E ++A
Sbjct: 326 ICVKYDHKITAGANGFTELTYAANMLEAASLLENRQHA 363
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10758g059763
(82 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_807074 Trans-sialidase (Invasion) [Trypanosoma cruzi] 35 2e-04
XP_802427 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.007
XP_802771 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.18
>M.Javanica_Scaff10758g059763 on XP_807074 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 822
Score = 34.7 bits (78), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 28/44 (63%)
Query: 2 DSWANSSSCLFGDSWANSSSCLFGDSWANSSSCLFGDSWANSSS 45
DS ANS+S DS ANS+S DS ANS+S DS ANS+S
Sbjct: 684 DSGANSTSLTPVDSGANSTSSTPVDSGANSTSSTPVDSGANSTS 727
Score = 34.3 bits (77), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 32/59 (54%)
Query: 2 DSWANSSSCLFGDSWANSSSCLFGDSWANSSSCLFGDSWANSSSCLFGDSWAQKLLWSL 60
DS ANS+S DS ANS+S DS ANS+S S ANS+S DS A SL
Sbjct: 696 DSGANSTSSTPVDSGANSTSSTPVDSGANSTSSTPVGSGANSTSSTPVDSGANSTFSSL 754
Score = 29.3 bits (64), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 24/40 (60%)
Query: 14 DSWANSSSCLFGDSWANSSSCLFGDSWANSSSCLFGDSWA 53
DS ANS+S DS ANS+S DS ANS+S DS A
Sbjct: 684 DSGANSTSLTPVDSGANSTSSTPVDSGANSTSSTPVDSGA 723
Score = 26.2 bits (56), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 2 DSWANSSSCLFGDSWANSSSCLFGDSWANS--SSCLFGDSWANSSSCL 47
DS ANS+S S ANS+S DS ANS SS L G S + SS+ +
Sbjct: 720 DSGANSTSSTPVGSGANSTSSTPVDSGANSTFSSLLAGSSNSTSSTPV 767
>M.Javanica_Scaff10758g059763 on XP_802427 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 390
Score = 30.4 bits (67), Expect = 0.007, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 1 GDSWANSSSCLFGDSWANSSSCLFGDSWANSSSCLFGDSWANSSSCLFGDSWAQ 54
GD+ A+S+ GD+ A+S+ GD+ A+S+ GD+ A+S+ GD+ A
Sbjct: 275 GDNGAHSTPLTPGDNGAHSTPSAPGDNGAHSTPLTPGDNGAHSTPSTPGDNGAH 328
Score = 29.3 bits (64), Expect = 0.015, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 1 GDSWANSSSCLFGDSWANSSSCLFGDSWANSSSCLFGDSWANSSSCLFGDSWAQ 54
GDS A+S+ D+ A+S+ GD+ A+S+ GD+ A+S+ GD+ A
Sbjct: 251 GDSSAHSTPSTPADNGAHSTPSAPGDNGAHSTPLTPGDNGAHSTPSAPGDNGAH 304
Score = 28.5 bits (62), Expect = 0.036, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 36/71 (50%)
Query: 1 GDSWANSSSCLFGDSWANSSSCLFGDSWANSSSCLFGDSWANSSSCLFGDSWAQKLLWSL 60
GD+ A+S+ GD+ A+S+ GD+ A+S+ GD+ A+S+ D+ A +
Sbjct: 287 GDNGAHSTPSAPGDNGAHSTPLTPGDNGAHSTPSTPGDNGAHSTPSAPADNGAHSTPSTP 346
Query: 61 RSQLKGGQVLV 71
G VL+
Sbjct: 347 AGHGANGTVLI 357
Score = 28.1 bits (61), Expect = 0.048, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 1 GDSWANSSSCLFGDSWANSSSCLFGDSWANSSSCLFGDSWANSSSCLFGDSWAQ 54
D+ A+S+ GD+ A+S+ GD+ A+S+ GD+ A+S+ GD+ A
Sbjct: 263 ADNGAHSTPSAPGDNGAHSTPLTPGDNGAHSTPSAPGDNGAHSTPLTPGDNGAH 316
Score = 27.3 bits (59), Expect = 0.084, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 1 GDSWANSSSCLFGDSWANSSSCLFGDSWANSSSCLFGDSWANSSSCLFGDSWAQ 54
D+ A+S+ GDS A+S+ D+ A+S+ GD+ A+S+ GD+ A
Sbjct: 239 ADNGAHSTPSTPGDSSAHSTPSTPADNGAHSTPSAPGDNGAHSTPLTPGDNGAH 292
Score = 26.6 bits (57), Expect = 0.16, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 1 GDSWANSSSCLFGDSWANSSSCLFGDSWANSSSCLFGDSWANSSSCLFGDSWAQ 54
DS A+S+ D+ A+S+ GDS A+S+ D+ A+S+ GD+ A
Sbjct: 227 ADSSAHSTPSTPADNGAHSTPSTPGDSSAHSTPSTPADNGAHSTPSAPGDNGAH 280
Score = 21.9 bits (45), Expect = 7.8, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 26/53 (49%)
Query: 1 GDSWANSSSCLFGDSWANSSSCLFGDSWANSSSCLFGDSWANSSSCLFGDSWA 53
GD+ A+S+ GD+ A+S+ D+ A+S+ AN + + D A
Sbjct: 311 GDNGAHSTPSTPGDNGAHSTPSAPADNGAHSTPSTPAGHGANGTVLILHDGAA 363
>M.Javanica_Scaff10758g059763 on XP_802771 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 341
Score = 26.2 bits (56), Expect = 0.18, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 1 GDSWANSSSCLFGDSWANSSSCLFGDSWANSSSCLFGDSWANSSSCLFGDSWAQ 54
GD+ A+S+ D+ A+S+ GD+ A+S+ DS A+S+ DS A
Sbjct: 214 GDNGAHSTPSTPADNGAHSTPSTPGDNGAHSTPSTPADSSAHSTPSTPADSSAH 267
Score = 25.0 bits (53), Expect = 0.49, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 1 GDSWANSSSCLFGDSWANSSSCLFGDSWANSSSCLFGDSWANSSSCLFGDSWAQ 54
DS A+S+ D+ A+S+ GD+ A+S+ D+ A+S+ GD+ A
Sbjct: 190 ADSSAHSTPSTPADNGAHSTPSTPGDNGAHSTPSTPADNGAHSTPSTPGDNGAH 243
Score = 25.0 bits (53), Expect = 0.49, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 1 GDSWANSSSCLFGDSWANSSSCLFGDSWANSSSCLFGDSWANSSSCLFGDSWAQ 54
D+ A+S+ GD+ A+S+ D+ A+S+ GD+ A+S+ DS A
Sbjct: 202 ADNGAHSTPSTPGDNGAHSTPSTPADNGAHSTPSTPGDNGAHSTPSTPADSSAH 255
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1141g013158
(66 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351513 PfEMP1 (Establishment) [Plasmodium falciparum] 23 1.2
XP_001351514 PfEMP1 (Establishment) [Plasmodium falciparum] 23 1.2
XP_001349032 PfEMP1 (Establishment) [Plasmodium falciparum] 23 1.2
>M.Javanica_Scaff1141g013158 on XP_001351513 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2152
Score = 23.5 bits (49), Expect = 1.2, Method: Composition-based stats.
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 12 NARGRLCRGTGFSNCFGA 29
NARG++ G G ++CF A
Sbjct: 367 NARGKVRMGKGCTDCFFA 384
>M.Javanica_Scaff1141g013158 on XP_001351514 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2201
Score = 23.5 bits (49), Expect = 1.2, Method: Composition-based stats.
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 12 NARGRLCRGTGFSNCFGA 29
NARG++ G G ++CF A
Sbjct: 367 NARGKVRMGKGCTDCFFA 384
>M.Javanica_Scaff1141g013158 on XP_001349032 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2267
Score = 23.5 bits (49), Expect = 1.2, Method: Composition-based stats.
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 12 NARGRLCRGTGFSNCFGA 29
NARG++ G G ++CF A
Sbjct: 362 NARGKVRMGKGCTDCFFA 379
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1107g012829
(272 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10g000273
(320 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_810676 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.13
XP_817310 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 9.0
XP_816751 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 9.3
>M.Javanica_Scaff10g000273 on XP_810676 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1040
Score = 30.4 bits (67), Expect = 0.13, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 227 QLQTPTSFDATAELQNYLTS---SPSVNGLSQPPMPRSTPSLNKIASSPPLNKNNLLFLP 283
+L P +A A + +++ +P + LSQP +TPS K SP +KN
Sbjct: 728 ELNPPMKTNAAAAPEAEVSAPEGAPQNSHLSQPSEKDTTPSPQKQGLSPEKSKNEKHSAG 787
Query: 284 TSKTTNFNFA 293
+ +TT+ +FA
Sbjct: 788 SGQTTSTDFA 797
>M.Javanica_Scaff10g000273 on XP_817310 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 904
Score = 24.6 bits (52), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 80 PQYEAPQSLVQMTKSPLLTSINKQPGMGNT---PQSPLQQQP 118
P+ E P++LV +T+SP +++ + Q + ++ Q PL+++P
Sbjct: 743 PKPEGPKTLVVVTQSPAVSAADVQGTVTHSNSAGQRPLEEEP 784
>M.Javanica_Scaff10g000273 on XP_816751 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1042
Score = 24.6 bits (52), Expect = 9.3, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 247 SPSVNGLSQPPMPRSTPSLNKIASSPPLNKNNLLFLPTSKTTNFNF 292
+P + LSQP +T S K SP +KN + +TT+ +F
Sbjct: 753 APEKSHLSQPSEKDTTLSPQKQGLSPEKSKNEKYSAGSGQTTSTDF 798
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10694g059572
(126 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_951757 VSG (Establishment) [Trypanosoma brucei] 26 0.76
XP_829763 VSG (Establishment) [Trypanosoma brucei] 25 1.3
XP_807074 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.8
XP_001611206 variant erythrocyte surface antigen-1, alpha subun... 25 1.8
XP_807499 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.2
AAW78156 TRAP (Invasion) [Plasmodium falciparum] 23 8.2
>M.Javanica_Scaff10694g059572 on XP_951757 VSG (Establishment) [Trypanosoma brucei]
Length = 476
Score = 25.8 bits (55), Expect = 0.76, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 15/34 (44%)
Query: 48 GKLENGETPPNNSENPVNSENSGNDVTPKNGGNT 81
G + G P N E V EN G T GGN+
Sbjct: 417 GTEDKGTCKPKNEEEGVKVENDGKTNTNTTGGNS 450
>M.Javanica_Scaff10694g059572 on XP_829763 VSG (Establishment) [Trypanosoma brucei]
Length = 476
Score = 25.4 bits (54), Expect = 1.3, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 6/46 (13%)
Query: 42 ENNYCSGKLE------NGETPPNNSENPVNSENSGNDVTPKNGGNT 81
E + C+GK E GE E V +EN G T G N+
Sbjct: 416 EQDKCNGKCEWKEINGKGECKSKTGEEGVKAENEGKTTTNTTGRNS 461
>M.Javanica_Scaff10694g059572 on XP_807074 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 822
Score = 24.6 bits (52), Expect = 1.8, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 29/78 (37%), Gaps = 5/78 (6%)
Query: 47 SGKLENGETPPNNSEN-----PVNSENSGNDVTPKNGGNTQTSSVCKDIGKGCQLITSLY 101
SG TP ++ N PV+S + TP G TSS D G + L
Sbjct: 697 SGANSTSSTPVDSGANSTSSTPVDSGANSTSSTPVGSGANSTSSTPVDSGANSTFSSLLA 756
Query: 102 KAAGRPCSSSVSLICAST 119
++ S+ V ST
Sbjct: 757 GSSNSTSSTPVGSSAKST 774
Score = 23.9 bits (50), Expect = 4.3, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 21/50 (42%)
Query: 63 PVNSENSGNDVTPKNGGNTQTSSVCKDIGKGCQLITSLYKAAGRPCSSSV 112
PV+S + +TP + G TSS D G T + A S+ V
Sbjct: 682 PVDSGANSTSLTPVDSGANSTSSTPVDSGANSTSSTPVDSGANSTSSTPV 731
Score = 23.5 bits (49), Expect = 5.7, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 24/62 (38%)
Query: 58 NNSENPVNSENSGNDVTPKNGGNTQTSSVCKDIGKGCQLITSLYKAAGRPCSSSVSLICA 117
+ S PV+S + TP + G TSS D G T + A S+ V
Sbjct: 689 STSLTPVDSGANSTSSTPVDSGANSTSSTPVDSGANSTSSTPVGSGANSTSSTPVDSGAN 748
Query: 118 ST 119
ST
Sbjct: 749 ST 750
>M.Javanica_Scaff10694g059572 on XP_001611206 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1285
Score = 25.0 bits (53), Expect = 1.8, Method: Composition-based stats.
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Query: 47 SGKLENGE--TPPNNSENPVNSEN 68
SGK + G+ TP N+ E+P SEN
Sbjct: 954 SGKTQKGQDNTPCNHDEDPSKSEN 977
>M.Javanica_Scaff10694g059572 on XP_807499 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 834
Score = 24.3 bits (51), Expect = 3.2, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 58 NNSENPVNSENSGNDVTPKNGGNTQTSSVCKDIGKGCQLITSLYKAAGRPCSSS 111
+ S PV S + TP G TSS +G G + ++S +G +SS
Sbjct: 689 STSSTPVGSGSKSMSSTPVGSGAKSTSST--PVGSGSKSMSSTPVGSGAKSTSS 740
>M.Javanica_Scaff10694g059572 on AAW78156 TRAP (Invasion) [Plasmodium falciparum]
Length = 581
Score = 22.7 bits (47), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 5/35 (14%)
Query: 51 ENGETP-----PNNSENPVNSENSGNDVTPKNGGN 80
EN E P P+N ENP N EN N P N N
Sbjct: 347 ENPENPSNPENPSNPENPSNPENPSNPENPSNPEN 381
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff11204g061127
(68 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349033 PfEMP1 (Establishment) [Plasmodium falciparum] 22 7.1
>M.Javanica_Scaff11204g061127 on XP_001349033 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2064
Score = 21.6 bits (44), Expect = 7.1, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 17/36 (47%)
Query: 21 VEQMAIENNEQIEQLNGNQLNENQIEANINNEDSFF 56
V Q AI N E+ Q N+ EN I NN+ F
Sbjct: 1146 VHQEAIMNCEKQTQFCKNKNGENSISGTQNNQKYAF 1181
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10872g060097
(168 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001347690 PfEMP1 (Establishment) [Plasmodium falciparum] 30 0.080
XP_811304 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.29
CAE53332 SuAT1 (Establishment) [Theileria annulata] 25 1.7
>M.Javanica_Scaff10872g060097 on XP_001347690 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 29.6 bits (65), Expect = 0.080, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 86 ILQIFTNLRNRPQYLGQTVNF-EWNRNRKPRDEKPGDNRPKLGAPVNN 132
+L+ TN +PQY +TV E N + +P PG + P G P+NN
Sbjct: 1175 LLEDKTNEPKKPQYQYKTVELKEENSDTQPI--TPGSSSPSGGDPINN 1220
>M.Javanica_Scaff10872g060097 on XP_811304 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 892
Score = 28.1 bits (61), Expect = 0.29, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 65 LILMLQDPQRCSLFHREIMHTILQIFTNLRNRPQYLGQTVNFE 107
++ + D RCSLFH + L + R Q L TV FE
Sbjct: 39 MVPLTVDGWRCSLFHPFLGIFSLHFLNHTRGSKQTLNATVKFE 81
>M.Javanica_Scaff10872g060097 on CAE53332 SuAT1 (Establishment) [Theileria annulata]
Length = 558
Score = 25.4 bits (54), Expect = 1.7, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 110 RNRKPRDEKPGDNRPKLGAPVNNRLCP 136
R R+PR +KP K+G P R P
Sbjct: 398 RIRRPRKQKPESETEKVGKPKRKRGRP 424
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10944g060309
(160 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_816570 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.1
>M.Javanica_Scaff10944g060309 on XP_816570 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 718
Score = 26.2 bits (56), Expect = 1.1, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 10/116 (8%)
Query: 27 PPIEDMFFQSNPNCAKITFENGYLPEMLKLIRKYPTSKLYNKYSTTQKIDQIGED-ANAD 85
P + + S PN + F G L + IR + LY TQK GED ANA
Sbjct: 353 PGVLSRLWTSEPNPRGLNFALGDLITLNSGIR---SVMLY-----TQKGFPQGEDKANAL 404
Query: 86 FAANTELHNICQEIMDSGNPNLDCSKLNRIYQEEVKECLKRHDERNQISKSIFTNP 141
+ T+ + C S + + + + NR+ Q H++R+QI+ IF +P
Sbjct: 405 YLWVTDNNRTCPVGPISMDDDRERTVANRL-QHSNNMLYLLHEKRDQITGGIFLSP 459
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1078g012581
(225 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum] 26 2.3
XP_001349434 PfEMP1 (Establishment) [Plasmodium falciparum] 25 4.1
XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum] 24 7.2
>M.Javanica_Scaff1078g012581 on XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2980
Score = 25.8 bits (55), Expect = 2.3, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Query: 110 HEAEFITNELKKYDEIVKNYKNNFTT 135
HE E I N+LK+YD+ NY++ T
Sbjct: 165 HEGEMIANKLKEYDK--SNYESRICT 188
>M.Javanica_Scaff1078g012581 on XP_001349434 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2109
Score = 25.0 bits (53), Expect = 4.1, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 75 KYKNLFKIFKEAFGRLVIKVAEFAELN-LKNNKFPLHEAEFITNELKKYDEIVKNYKNNF 133
KYK L ++ E R I + N +N++ + +FI+N L+ N ++
Sbjct: 1781 KYKTLIEVVLEPSKR-DIPSGDIPHTNKFTDNEWNQLKKDFISNMLQNTQNTEPNVLHDN 1839
Query: 134 TTNTEYKELIKIVINSKTFMMDLHSK 159
N + + + ++ K F+M +H +
Sbjct: 1840 VDNNTHPTMSRHNVDQKPFIMSIHDR 1865
>M.Javanica_Scaff1078g012581 on XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum]
Length = 3130
Score = 24.3 bits (51), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Query: 43 EIDNSTGMPRGAVYQSDAIK--FEEYKFLEGNVEKYKNL 79
+I N+ + + + DAI+ FE+YK + NVE+YK L
Sbjct: 2054 DISNNIDIVSNKLNEIDAIQYNFEKYKEIFDNVEEYKTL 2092
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1072g012535
(157 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_804330 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.8
XP_810574 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.8
XP_809726 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.6
XP_813587 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.7
XP_812069 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.8
XP_814486 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.8
XP_820186 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.8
AAW78158 TRAP (Invasion) [Plasmodium falciparum] 23 7.1
AAW78175 TRAP (Invasion) [Plasmodium falciparum] 23 7.2
AAW78139 TRAP (Invasion) [Plasmodium falciparum] 23 7.2
AAW78150 TRAP (Invasion) [Plasmodium falciparum] 23 7.3
XP_810140 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 7.8
>M.Javanica_Scaff1072g012535 on XP_804330 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 910
Score = 24.3 bits (51), Expect = 3.8, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Query: 92 GRKVVI--KKNSYFSDGEKNEIYEFVKDLSK 120
GRK VI + YF D +K+EI+ ++ D ++
Sbjct: 364 GRKKVILLTQLEYFEDNQKSEIHLWLTDTNR 394
>M.Javanica_Scaff1072g012535 on XP_810574 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 954
Score = 24.3 bits (51), Expect = 3.8, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Query: 92 GRKVVI--KKNSYFSDGEKNEIYEFVKDLSK 120
GRK VI + YF D +K+EI+ ++ D ++
Sbjct: 397 GRKKVILLTQLEYFEDNQKSEIHLWLTDTNR 427
>M.Javanica_Scaff1072g012535 on XP_809726 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 565
Score = 24.3 bits (51), Expect = 4.6, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 92 GRKVVI-KKNSYFSDGEKNEIYEFVKDLSK 120
G+KV++ + YF D E++EI+ ++ D ++
Sbjct: 365 GKKVILLTQLEYFGDKERSEIHLWLTDTNR 394
>M.Javanica_Scaff1072g012535 on XP_813587 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 751
Score = 24.3 bits (51), Expect = 4.7, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 92 GRKVVI-KKNSYFSDGEKNEIYEFVKDLSK 120
G+KV++ + YF D E++EI+ ++ D ++
Sbjct: 202 GKKVILLTQLEYFGDKERSEIHLWLTDTNR 231
>M.Javanica_Scaff1072g012535 on XP_812069 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 948
Score = 24.3 bits (51), Expect = 4.8, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 92 GRKVVI-KKNSYFSDGEKNEIYEFVKDLSK 120
G+KV++ + YF D E++EI+ ++ D ++
Sbjct: 365 GKKVILLTQLEYFGDKERSEIHLWLTDTNR 394
>M.Javanica_Scaff1072g012535 on XP_814486 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 948
Score = 24.3 bits (51), Expect = 4.8, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 92 GRKVVI-KKNSYFSDGEKNEIYEFVKDLSK 120
G+KV++ + YF D E++EI+ ++ D ++
Sbjct: 365 GKKVILLTQLEYFGDKERSEIHLWLTDTNR 394
>M.Javanica_Scaff1072g012535 on XP_820186 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1133
Score = 24.3 bits (51), Expect = 4.8, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 92 GRKVVI-KKNSYFSDGEKNEIYEFVKDLSK 120
G+KV++ + YF D E++EI+ ++ D ++
Sbjct: 365 GKKVILLTQLEYFGDKERSEIHLWLTDTNR 394
>M.Javanica_Scaff1072g012535 on AAW78158 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 23.5 bits (49), Expect = 7.1, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 116 KDLSKNVVEKCKFIVEWQNDLYRKSLDYTVGGSIR 150
+D+ N+V++ K++ E ND L GSIR
Sbjct: 26 RDVQNNIVDEIKYLEEVCNDQVDLYLLMDCSGSIR 60
>M.Javanica_Scaff1072g012535 on AAW78175 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 23.5 bits (49), Expect = 7.2, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 116 KDLSKNVVEKCKFIVEWQNDLYRKSLDYTVGGSIR 150
+D+ N+V++ K++ E ND L GSIR
Sbjct: 26 RDVQNNIVDEIKYLEEVCNDQVDLYLLMDCSGSIR 60
>M.Javanica_Scaff1072g012535 on AAW78139 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 23.5 bits (49), Expect = 7.2, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 116 KDLSKNVVEKCKFIVEWQNDLYRKSLDYTVGGSIR 150
+D+ N+V++ K++ E ND L GSIR
Sbjct: 26 RDVQNNIVDEIKYLEEVCNDQVDLYLLMDCSGSIR 60
>M.Javanica_Scaff1072g012535 on AAW78150 TRAP (Invasion) [Plasmodium falciparum]
Length = 569
Score = 23.5 bits (49), Expect = 7.3, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 116 KDLSKNVVEKCKFIVEWQNDLYRKSLDYTVGGSIR 150
+D+ N+V++ K++ E ND L GSIR
Sbjct: 26 RDVQNNIVDEIKYLEEVCNDQVDLYLLMDCSGSIR 60
>M.Javanica_Scaff1072g012535 on XP_810140 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 923
Score = 23.5 bits (49), Expect = 7.8, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 92 GRKVVI-KKNSYFSDGEKNEIYEFVKDLSK 120
G+KV++ + YF D K+EI+ ++ D ++
Sbjct: 364 GKKVILLTQLEYFGDNRKSEIHLWLTDTNR 393
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1143g013179
(218 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609935 variant erythrocyte surface antigen-1, alpha subun... 25 4.7
XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum] 25 5.9
XP_818221 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.0
XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum] 24 7.8
XP_001609034 variant erythrocyte surface antigen-1, alpha subun... 24 9.5
>M.Javanica_Scaff1143g013179 on XP_001609935 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1317
Score = 25.0 bits (53), Expect = 4.7, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 26 GSVCCEVLSGDPNNPNYNPAS 46
G C +VL+ + NPNY PA+
Sbjct: 888 GFSCQKVLNDEKENPNYPPAA 908
>M.Javanica_Scaff1143g013179 on XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2858
Score = 24.6 bits (52), Expect = 5.9, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 121 GTGYLIPPNYGNQPLMNNYPPSYNNYPPINYPVNNRPV 158
G + N+ +PL++N +N + I +NN P+
Sbjct: 203 GKDLFLGHNHKKKPLLDNLEKIFNRFQKIYEDINNLPI 240
>M.Javanica_Scaff1143g013179 on XP_818221 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 748
Score = 24.6 bits (52), Expect = 6.0, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 29/65 (44%)
Query: 61 PQTNNRPNTGTFPGYYPPGQQFPPQTYYPPQQQYNQPPVIIVINNPGSGAGYSYNIPPNY 120
P+T+NR G G++ PQ + ++ +N +++++ AG S + N
Sbjct: 11 PRTHNRRRVTGSSGRRREGRESEPQRPHMSRRFFNSAVLLLLVVMMCCSAGASNAVTSNS 70
Query: 121 GTGYL 125
G L
Sbjct: 71 GNAQL 75
>M.Javanica_Scaff1143g013179 on XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2178
Score = 24.3 bits (51), Expect = 7.8, Method: Composition-based stats.
Identities = 10/16 (62%), Positives = 10/16 (62%)
Query: 40 PNYNPASQPGTNPGKN 55
PN NP QPGTN N
Sbjct: 1100 PNGNPLPQPGTNGTSN 1115
>M.Javanica_Scaff1143g013179 on XP_001609034 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1313
Score = 23.9 bits (50), Expect = 9.5, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 26 GSVCCEVLSGDPNNPNYNPAS 46
G C EVL+ + NP Y PA+
Sbjct: 863 GFSCSEVLNDEKENPVYPPAA 883
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1079g012583
(64 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_828101 VSG (Establishment) [Trypanosoma brucei] 23 1.0
>M.Javanica_Scaff1079g012583 on XP_828101 VSG (Establishment) [Trypanosoma brucei]
Length = 487
Score = 23.5 bits (49), Expect = 1.0, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 22 NEVNAWYPYRPGRSVPGQDVIAKRHVTAMDSI 53
N+ N W PY QD++ K ++ +D +
Sbjct: 100 NKENKWEPYWKHWHKAAQDILKKENLKIIDDM 131
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1101g012772
(187 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_819341 Trans-sialidase (Invasion) [Trypanosoma cruzi] 33 0.010
XP_820662 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.20
XP_821303 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.27
XP_810288 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.30
XP_803006 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.31
XP_819568 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.32
XP_816556 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.32
XP_818344 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.34
XP_813578 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.34
XP_814156 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.35
XP_809902 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.36
XP_812152 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.48
XP_818399 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.59
XP_813500 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.67
XP_818190 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.67
XP_814623 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.74
XP_821137 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.83
XP_803103 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.84
XP_807358 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.94
XP_803204 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.1
XP_821910 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.1
XP_809580 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.2
XP_807802 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.2
XP_811934 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.2
XP_820773 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.3
XP_804819 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.3
XP_813429 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.4
XP_807799 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.5
XP_804273 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.5
XP_816177 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.5
XP_817001 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.6
XP_821712 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.6
XP_815148 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.6
XP_814930 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.7
XP_808179 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.7
XP_804820 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.8
XP_820757 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.8
XP_817994 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.9
XP_817382 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.0
XP_816303 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.2
XP_816821 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.4
XP_820498 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.4
XP_818308 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.6
XP_821902 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.6
XP_820300 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.9
XP_812701 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.9
XP_810753 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.9
XP_821548 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.0
XP_821293 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.1
XP_819530 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.1
XP_807740 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.1
XP_821909 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.2
XP_810953 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.2
XP_821991 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.2
XP_819343 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.5
XP_813257 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.5
XP_805509 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.5
XP_818346 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.6
XP_806401 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.7
XP_816389 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.8
XP_809283 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.8
XP_818480 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.9
XP_804106 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.0
XP_817993 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.4
XP_806556 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.4
XP_814186 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.5
XP_809198 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.5
XP_805613 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.5
XP_810237 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.5
XP_815498 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.7
XP_820017 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.7
XP_807798 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.8
XP_812988 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.9
XP_817996 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.0
XP_811406 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 5.0
XP_808081 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.1
XP_821390 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.1
XP_813677 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.1
XP_808550 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.1
XP_806431 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.2
XP_820303 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.2
XP_820307 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.3
XP_816459 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.3
XP_821677 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.3
XP_814246 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.4
XP_811004 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.5
XP_817615 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.7
XP_818193 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.8
XP_805336 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.8
XP_813726 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.9
XP_820663 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 6.0
XP_808639 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 6.0
XP_815842 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 6.0
XP_821425 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 6.1
XP_813642 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 6.1
XP_815511 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 6.2
XP_821294 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 6.3
XP_811703 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 6.4
XP_818708 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 6.8
XP_821669 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 6.8
>M.Javanica_Scaff1101g012772 on XP_819341 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 888
Score = 32.7 bits (73), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 9/99 (9%)
Query: 17 LGNLCPQNCW-NPHLGECINHCWNNVCNYCNSFFGNQNLNLSDDNYEEEECEADYDGDGS 75
+ LCP + NP G N C V + G + N SDD + +E + +
Sbjct: 497 VSKLCPSSAVENPSPG---NACSTTV-KITDGLVGFLSGNFSDDTWRDEYLGVNATVKNN 552
Query: 76 EGEVQEDNHDTEGQWEDYTGGEWEEMPSTSQGQTGHYHY 114
EG + H+ ++ G W E P SQGQ YH+
Sbjct: 553 EGGNKAALHEGSVKFT----GAWAEWPVGSQGQNQLYHF 587
>M.Javanica_Scaff1101g012772 on XP_820662 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 956
Score = 28.9 bits (63), Expect = 0.20, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Query: 55 NLSDDNYEEEECEADYDGDGSEGEVQEDNHDTEGQWEDYTGGEWEEMPSTSQGQTGHYHY 114
N S+D + +E + G+EG + H + ++ G W E P SQG+ YH+
Sbjct: 531 NFSNDTWRDEYLGVNATVKGNEGGKKATLHASGVTFQ----GTWAEWPVGSQGENQLYHF 586
>M.Javanica_Scaff1101g012772 on XP_821303 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 808
Score = 28.5 bits (62), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 56/171 (32%), Gaps = 31/171 (18%)
Query: 17 LGNLCPQNCW-NPHLGECINHCWNNVCNYCNSFFGNQNLNLSDDNYEEEECEADYDGDGS 75
+ LCP NP G N C + + G + N S + + +E +
Sbjct: 498 VSKLCPSTAATNPSTG---NGC--STVKITDGLVGFFSGNFSGNTWRDEYLGVNATVSNK 552
Query: 76 EGEVQEDNHDTEGQWEDYTGGEWEEMPSTSQGQTGHYHYEEAEEECEAEYEED---ESEG 132
+G V++ TE G W E P QG+ YH+ A D EG
Sbjct: 553 DGGVEK----TENGVTFKGRGAWAEWPVGKQGENQLYHFANHNFTLVATVSIDGEPTKEG 608
Query: 133 KFPEYDINEGA----------------WQEMPSTSQGQTTHHYDNWDEDVS 167
P + G+ WQ + S G T H W+ D +
Sbjct: 609 FIPLMGVRAGSDGGTKLMELSYGSGKKWQAL--CSDGTTAEHSSTWERDTT 657
>M.Javanica_Scaff1101g012772 on XP_810288 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 874
Score = 28.1 bits (61), Expect = 0.30, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 31/91 (34%), Gaps = 20/91 (21%)
Query: 96 GEWEEMPSTSQGQTGHYHYEEAEEECEAEYEED--ESEGKFPEYDIN------------- 140
G W E P QG+ YH+ A D EG P +
Sbjct: 553 GAWAEWPVGRQGENQPYHFANYNFTLVATVSIDGEPQEGPIPLMGVQMNDSGKTVLLGLS 612
Query: 141 ---EGAWQEMPSTSQGQTTHHYDNWDEDVSQ 168
E WQ + S G+TT H W++D +
Sbjct: 613 YNKEKKWQVL--CSGGKTTEHSSTWEKDTTH 641
>M.Javanica_Scaff1101g012772 on XP_803006 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 582
Score = 28.1 bits (61), Expect = 0.31, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 6/60 (10%)
Query: 55 NLSDDNYEEEECEADYDGDGSEGEVQEDNHDTEGQWEDYTGGEWEEMPSTSQGQTGHYHY 114
N SD+ + +E D G E + + Q G W E P +QG+ YH+
Sbjct: 326 NFSDNKWRDEYLGVDATVKGGAAEATKTSDGVTFQ------GAWAEWPVGAQGENQLYHF 379
Score = 24.3 bits (51), Expect = 6.3, Method: Composition-based stats.
Identities = 9/23 (39%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Query: 141 EGAWQEMPSTSQGQTT-HHYDNW 162
+GAW E P +QG+ +H+ N+
Sbjct: 360 QGAWAEWPVGAQGENQLYHFANY 382
>M.Javanica_Scaff1101g012772 on XP_819568 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 758
Score = 28.1 bits (61), Expect = 0.32, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 6/60 (10%)
Query: 55 NLSDDNYEEEECEADYDGDGSEGEVQEDNHDTEGQWEDYTGGEWEEMPSTSQGQTGHYHY 114
N SD+ + +E D G E + + Q G W E P +QG+ YH+
Sbjct: 502 NFSDNKWRDEYLGVDATVKGGAAEATKTSDGVTFQ------GAWAEWPVGAQGENQLYHF 555
>M.Javanica_Scaff1101g012772 on XP_816556 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 807
Score = 28.1 bits (61), Expect = 0.32, Method: Composition-based stats.
Identities = 31/126 (24%), Positives = 50/126 (39%), Gaps = 20/126 (15%)
Query: 55 NLSDDNYEEEECEADYD-GDGSEGEVQEDNHDTEGQWEDYTGGEWEEMPSTSQGQTGHYH 113
N SD + +E D G+ G E +++G + GG W E P SQG+ YH
Sbjct: 530 NFSDTTWRDEYLGVDATVKKGTNGAATEVTENSDGV--KFRGG-WAEWPVGSQGENQLYH 586
Query: 114 YEE------AEEECEAEYEEDE---------SEGKFPEYDINEGAWQEMPSTSQGQTT-H 157
+ A E + D S+G +++ G+ ++ + G+TT
Sbjct: 587 FANYNFTLVATVSIHGEPKSDSVPLMGVRAGSDGGTKLMELSYGSGKKWQALCGGRTTAE 646
Query: 158 HYDNWD 163
H WD
Sbjct: 647 HSSTWD 652
>M.Javanica_Scaff1101g012772 on XP_818344 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 928
Score = 28.1 bits (61), Expect = 0.34, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 6/98 (6%)
Query: 17 LGNLCPQNCWNPHLGECINHCWNNVCNYCNSFFGNQNLNLSDDNYEEEECEADYDGDGSE 76
+ LCP + G I++ + + G + N S+D + +E + +E
Sbjct: 478 VSKLCPSE--SAAKGRPIDNACSPTVKITDGLVGFLSGNFSNDTWRDEYLGVNATVSNNE 535
Query: 77 GEVQEDNHDTEGQWEDYTGGEWEEMPSTSQGQTGHYHY 114
G + H+ ++ G W E P QG+ YH+
Sbjct: 536 GAAKAKLHEGSVKFH----GAWAEWPVGEQGENQLYHF 569
>M.Javanica_Scaff1101g012772 on XP_813578 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 893
Score = 28.1 bits (61), Expect = 0.34, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 55 NLSDDNYEEEE--CEADYDGDGSEGEVQEDNHDTEGQWEDYTGGEWEEMPSTSQGQTGHY 112
N SD+ + +E A G+ EG+ + + + + G W E P SQG+ Y
Sbjct: 510 NFSDNTWRDEYLGVNATVKGNEVEGKKKAEAATVDSEKGVRFQGAWAEWPVGSQGENQLY 569
Query: 113 HY 114
H+
Sbjct: 570 HF 571
Score = 25.8 bits (55), Expect = 2.1, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 18/97 (18%)
Query: 66 CEADYDGDGSEGEVQEDNHDTEGQWEDYTGGEWEEMPSTSQGQTGHYHYEEAEEECEAEY 125
C AD DG G + + D W D E+ + +T +G E +++ EA
Sbjct: 494 CSADKITDGLVGFLSGNFSDN--TWRD----EYLGVNATVKGNE-----VEGKKKAEAAT 542
Query: 126 EEDESEGKFPEYDINEGAWQEMPSTSQGQTT-HHYDN 161
+ E +F +GAW E P SQG+ +H+ N
Sbjct: 543 VDSEKGVRF------QGAWAEWPVGSQGENQLYHFAN 573
>M.Javanica_Scaff1101g012772 on XP_814156 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 759
Score = 28.1 bits (61), Expect = 0.35, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 6/60 (10%)
Query: 55 NLSDDNYEEEECEADYDGDGSEGEVQEDNHDTEGQWEDYTGGEWEEMPSTSQGQTGHYHY 114
N SD+ + +E D G E + + Q G W E P +QG+ YH+
Sbjct: 503 NFSDNKWRDEYLGVDATVKGGAAEATKTSDGVTFQ------GAWAEWPVGAQGENQLYHF 556
>M.Javanica_Scaff1101g012772 on XP_809902 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 955
Score = 28.1 bits (61), Expect = 0.36, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
Query: 55 NLSDDNYEEEECEADYDGDGSEGEVQEDNHDTEGQWEDYTGGEWEEMPSTSQGQTGHYHY 114
N SD+ + +E + ++G + DN T +TG W E P SQG+ YH+
Sbjct: 537 NFSDNTWRDEYLGVNATVKDNDGAKKTDNGVT------FTGA-WAEWPVGSQGENQLYHF 589
Score = 26.2 bits (56), Expect = 1.5, Method: Composition-based stats.
Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Query: 142 GAWQEMPSTSQGQTT-HHYDNWD 163
GAW E P SQG+ +H+ N+D
Sbjct: 571 GAWAEWPVGSQGENQLYHFANYD 593
>M.Javanica_Scaff1101g012772 on XP_812152 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 923
Score = 27.7 bits (60), Expect = 0.48, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 55 NLSDDNYEEEECEADYDGDGSEGEVQEDNHDT-EGQWEDYTGGEWEEMPSTSQGQTGHYH 113
N SD+ + +E + G++GE ++ T + + G W E P SQG+ YH
Sbjct: 539 NFSDNTWRDEYLGVNATVKGNDGEKKKAEAATVDSEKGVRFQGAWAEWPVGSQGENQLYH 598
Query: 114 Y 114
+
Sbjct: 599 F 599
Score = 24.3 bits (51), Expect = 6.2, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Query: 141 EGAWQEMPSTSQGQTT-HHYDNW 162
+GAW E P SQG+ +H+ N+
Sbjct: 580 QGAWAEWPVGSQGENQLYHFANY 602
>M.Javanica_Scaff1101g012772 on XP_818399 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 953
Score = 27.3 bits (59), Expect = 0.59, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 6/81 (7%)
Query: 40 NVCN---YCNSFFGNQNLNLSDDNYEEEECEADY---DGDGSEGEVQEDNHDTEGQWEDY 93
N CN + G + N S+D + +E + + DG E E + T+
Sbjct: 507 NACNTVKITDGLVGFLSDNFSNDTWRDEYLGVNATVKNKDGGETENTRETGATKTSDGVK 566
Query: 94 TGGEWEEMPSTSQGQTGHYHY 114
G W E P SQG+ YH+
Sbjct: 567 FHGAWAEWPVGSQGENQLYHF 587
Score = 23.9 bits (50), Expect = 7.4, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Query: 142 GAWQEMPSTSQGQTT-HHYDNWD 163
GAW E P SQG+ +H+ N++
Sbjct: 569 GAWAEWPVGSQGENQLYHFANYN 591
>M.Javanica_Scaff1101g012772 on XP_813500 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 898
Score = 27.3 bits (59), Expect = 0.67, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query: 55 NLSDDNYEEEECEADYDGDGSEGEVQEDNHDTEGQWEDYTGGEWEEMPSTSQGQTGHYHY 114
N SD +++E + G++G + ++ + Q G W E P +QG+ YH+
Sbjct: 518 NFSDKTWKDEYLGVNATVKGNDGGAEMTDNGVKFQ------GAWAEWPVGAQGENQLYHF 571
>M.Javanica_Scaff1101g012772 on XP_818190 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 807
Score = 27.3 bits (59), Expect = 0.67, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 55/166 (33%), Gaps = 30/166 (18%)
Query: 17 LGNLCPQNC-WNPHLGECINHCWNNVCNYCNSFFGNQNLNLSDDNYEEEECEADYDGDGS 75
+ LCP NP G N C + + G + N SD+ + +E +
Sbjct: 498 VSKLCPSTAATNPSTG---NGC--SAVKITDGLVGFFSGNFSDNTWRDEYLGVNATVSNK 552
Query: 76 EGEVQEDNHDTEGQWEDYTGGEWEEMPSTSQGQTGHYHYEEAEEECEA--EYEEDESEGK 133
+G V++ TE G W E P SQG+ YH+ A + G
Sbjct: 553 DGGVEK----TENGVTFKGRGAWAEWPVGSQGENQLYHFANHNFTLVATVSIHGEPKSGS 608
Query: 134 FPEYDINEGA----------------WQEMPSTSQGQTTHHYDNWD 163
P + G+ WQ + S G T H WD
Sbjct: 609 VPLMGVRAGSDGGTKLMELSYGSGKKWQAL--CSDGTTAEHSSTWD 652
>M.Javanica_Scaff1101g012772 on XP_814623 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 895
Score = 26.9 bits (58), Expect = 0.74, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Query: 55 NLSDDNYEEEECEADYDGDGSEGEVQEDNHDTEGQWEDYTGGEWEEMPSTSQGQTGHYHY 114
NLSD +++E + G++G + H + +++ G W E P QG+ YH+
Sbjct: 538 NLSDGTWKDEYLGVNATVKGNDGGNKATLHASGVKFQ----GAWAEWPVGKQGENQLYHF 593
>M.Javanica_Scaff1101g012772 on XP_821137 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 956
Score = 26.9 bits (58), Expect = 0.83, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 34/97 (35%), Gaps = 25/97 (25%)
Query: 96 GEWEEMPSTSQGQTGHYHYEE------AEEECEAEYEE----------DESEGKFP---- 135
G W E P SQGQ YH+ A E +E S+G P
Sbjct: 572 GAWAEWPVGSQGQNQLYHFANYNFTLVATVSIHGEPKEGGSPIPLMGAKMSDGNNPVLLG 631
Query: 136 -EYDINEGAWQEMPSTSQGQTTHHYDNWD--EDVSQY 169
Y+ E W + GQ H NW+ D +QY
Sbjct: 632 LSYNNKEKKWILL--CGGGQNKEHSSNWETLTDTTQY 666
>M.Javanica_Scaff1101g012772 on XP_803103 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 531
Score = 26.9 bits (58), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 22/106 (20%), Positives = 42/106 (39%), Gaps = 11/106 (10%)
Query: 12 SCWNGLGNLCPQNCWNPHLGECI---NHCWNNVCNYCNSFFGNQNLNLSDDNYEEEECEA 68
+ W + +L + C + E I N C + G + N SD + +E
Sbjct: 416 TTWKKVDDLVSKLCPSKSDVESILPENAC--RTATPADGLVGFLSANFSDKTWRDEYLGV 473
Query: 69 DYDGDGSEGEVQEDNHDTEGQWEDYTGGEWEEMPSTSQGQTGHYHY 114
+ G++G + ++ + + G W E P +QG+ YH+
Sbjct: 474 NATIKGNDGGAEMTDNGVKFR------GAWAEWPVGAQGENQMYHF 513
>M.Javanica_Scaff1101g012772 on XP_807358 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 872
Score = 26.6 bits (57), Expect = 0.94, Method: Composition-based stats.
Identities = 11/18 (61%), Positives = 12/18 (66%)
Query: 142 GAWQEMPSTSQGQTTHHY 159
GAW E P SQGQT +Y
Sbjct: 635 GAWVEWPVGSQGQTVPYY 652
Score = 24.6 bits (52), Expect = 4.3, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 96 GEWEEMPSTSQGQTGHYHY 114
G W E P SQGQT Y++
Sbjct: 635 GAWVEWPVGSQGQTVPYYF 653
>M.Javanica_Scaff1101g012772 on XP_803204 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 700
Score = 26.6 bits (57), Expect = 1.1, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 73 DGSEGEVQEDNHDTEGQWEDYTG-GEWEEMPSTSQGQTGHYHY 114
+G+ V E ++G +TG G W E P SQG+ YH+
Sbjct: 541 EGASAAVAEKAESSDGV--KFTGRGAWAEWPVGSQGENQLYHF 581
Score = 26.2 bits (56), Expect = 1.5, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 41/107 (38%), Gaps = 16/107 (14%)
Query: 58 DDNYEEEECEADYDGDGSEGEVQEDNHDTEGQWEDYTGGEWEEMPSTSQGQTGHYHYEEA 117
+D + C A DG G + + D G W D E + + + G EE
Sbjct: 494 EDTSPDNACSAAIPTDGLVGFLSGNFSD--GTWRD------EYLGVNATVKKGA---EEG 542
Query: 118 EEECEAEYEEDESEGKFPEYDINEGAWQEMPSTSQGQTT-HHYDNWD 163
AE E KF GAW E P SQG+ +H+ N++
Sbjct: 543 ASAAVAEKAESSDGVKF----TGRGAWAEWPVGSQGENQLYHFANYN 585
>M.Javanica_Scaff1101g012772 on XP_821910 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 853
Score = 26.6 bits (57), Expect = 1.1, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 7/60 (11%)
Query: 55 NLSDDNYEEEECEADYDGDGSEGEVQEDNHDTEGQWEDYTGGEWEEMPSTSQGQTGHYHY 114
N S++ + +E + G++G + + T G W E P SQGQ YH+
Sbjct: 535 NFSENTWRDEYLGVNATVKGNDGATKTSDGVT-------FQGAWAEWPVGSQGQNQLYHF 587
Score = 26.2 bits (56), Expect = 1.3, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Query: 141 EGAWQEMPSTSQGQTT-HHYDNWD 163
+GAW E P SQGQ +H+ N++
Sbjct: 568 QGAWAEWPVGSQGQNQLYHFANYN 591
>M.Javanica_Scaff1101g012772 on XP_809580 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 776
Score = 26.6 bits (57), Expect = 1.2, Method: Composition-based stats.
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 145 QEMPSTSQGQTTHHYDNWDE 164
Q+MPS+SQG ++ Y W E
Sbjct: 66 QDMPSSSQGASSEKYYVWTE 85
>M.Javanica_Scaff1101g012772 on XP_807802 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 805
Score = 26.2 bits (56), Expect = 1.2, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 96 GEWEEMPSTSQGQTGHYHY 114
G W E P SQGQ YH+
Sbjct: 530 GAWAEWPVGSQGQNQLYHF 548
Score = 26.2 bits (56), Expect = 1.4, Method: Composition-based stats.
Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Query: 142 GAWQEMPSTSQGQTT-HHYDNWD 163
GAW E P SQGQ +H+ N++
Sbjct: 530 GAWAEWPVGSQGQNQLYHFANYN 552
>M.Javanica_Scaff1101g012772 on XP_811934 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 870
Score = 26.2 bits (56), Expect = 1.2, Method: Composition-based stats.
Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Query: 142 GAWQEMPSTSQGQTT-HHYDNWD 163
GAW E P SQG+ HH+ N++
Sbjct: 549 GAWAEWPVGSQGENQLHHFANYN 571
Score = 25.0 bits (53), Expect = 3.5, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 55 NLSDDNYEEEECEADYDGDGSEGEVQEDNHDTEGQWEDYTGGEWEEMPSTSQGQTGHYHY 114
N S+D + +E + +GE +D T+ + G W E P SQG+ +H+
Sbjct: 509 NFSNDTWRDEYLGVNATVKKKDGET-DDAGATKTSDGVHFHGAWAEWPVGSQGENQLHHF 567
>M.Javanica_Scaff1101g012772 on XP_820773 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 779
Score = 26.2 bits (56), Expect = 1.3, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 31/93 (33%), Gaps = 23/93 (24%)
Query: 96 GEWEEMPSTSQGQTGHYHYEEAEEECEAEYE-EDESEGKFP------------------- 135
G W E P +QG+ YH+ A E EG P
Sbjct: 556 GAWVEWPVGAQGENQLYHFANYNFTLVATVSVHGEPEGDTPIPLMGAKTNDNKNPVLLGL 615
Query: 136 EYDINEGAWQEMPSTSQGQTTHHYDNWDEDVSQ 168
YD EG WQ + S G T NW+ + +
Sbjct: 616 SYD-KEGKWQVL--CSDGTTKELRSNWEPETTH 645
>M.Javanica_Scaff1101g012772 on XP_804819 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 266
Score = 25.8 bits (55), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 12/19 (63%)
Query: 141 EGAWQEMPSTSQGQTTHHY 159
GAW E P SQGQT +Y
Sbjct: 43 RGAWVEWPVGSQGQTVPYY 61
Score = 23.9 bits (50), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 96 GEWEEMPSTSQGQTGHYHY 114
G W E P SQGQT Y++
Sbjct: 44 GAWVEWPVGSQGQTVPYYF 62
>M.Javanica_Scaff1101g012772 on XP_813429 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 818
Score = 26.2 bits (56), Expect = 1.4, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 96 GEWEEMPSTSQGQTGHYHY 114
G W E P SQGQ YH+
Sbjct: 545 GAWAEWPVGSQGQNQLYHF 563
Score = 25.8 bits (55), Expect = 1.6, Method: Composition-based stats.
Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Query: 142 GAWQEMPSTSQGQTT-HHYDNWD 163
GAW E P SQGQ +H+ N++
Sbjct: 545 GAWAEWPVGSQGQNQLYHFANYN 567
>M.Javanica_Scaff1101g012772 on XP_807799 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 345
Score = 25.8 bits (55), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 38/103 (36%), Gaps = 18/103 (17%)
Query: 17 LGNLCPQN--CWNPHLGE-CINHCWNNVCNYCNSFFGNQNLNLSDDNYEEEECEADYDGD 73
+ LCP NP G+ CI + G + N SD+ + +E
Sbjct: 51 VSKLCPSKSPAKNPSTGDACI------AGKITDGLVGFLSKNFSDNTWRDEYL------- 97
Query: 74 GSEGEVQEDNHDTEGQWEDYTG--GEWEEMPSTSQGQTGHYHY 114
G + V++ + + D G W E P QGQ YH+
Sbjct: 98 GVDATVKKGTNGGAAGYADGVKFQGAWAEWPVGKQGQNQLYHF 140
>M.Javanica_Scaff1101g012772 on XP_804273 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 369
Score = 25.8 bits (55), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 12/19 (63%)
Query: 141 EGAWQEMPSTSQGQTTHHY 159
GAW E P SQGQT +Y
Sbjct: 131 RGAWVEWPVGSQGQTVPYY 149
Score = 24.3 bits (51), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 96 GEWEEMPSTSQGQTGHYHY 114
G W E P SQGQT Y++
Sbjct: 132 GAWVEWPVGSQGQTVPYYF 150
>M.Javanica_Scaff1101g012772 on XP_816177 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 779
Score = 26.2 bits (56), Expect = 1.5, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 31/93 (33%), Gaps = 23/93 (24%)
Query: 96 GEWEEMPSTSQGQTGHYHYEEAEEECEAEYEED-ESEGKFP------------------- 135
G W E P QG+ YH+ A D E +G P
Sbjct: 556 GAWAEWPVGKQGENQLYHFANYNFTLVATVSIDGEPKGDTPIPLMGAKTNDNKNPVLLGL 615
Query: 136 EYDINEGAWQEMPSTSQGQTTHHYDNWDEDVSQ 168
YD EG WQ + S G T NW+ + +
Sbjct: 616 SYD-KEGKWQVL--CSDGTTKELRSNWEPETTH 645
>M.Javanica_Scaff1101g012772 on XP_817001 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 928
Score = 26.2 bits (56), Expect = 1.6, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 8/65 (12%)
Query: 55 NLSDDNYEEEECEADY-----DGDGSEGEVQEDNHDTEGQWEDYTGGEWEEMPSTSQGQT 109
N SDD + +E + + +G+ V E ++G +TG W E P QG+
Sbjct: 512 NFSDDTWRDEYLGVNATVKKGEEEGASAGVAETAESSDGV--KFTGA-WAEWPVGRQGEN 568
Query: 110 GHYHY 114
YH+
Sbjct: 569 QLYHF 573
>M.Javanica_Scaff1101g012772 on XP_821712 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 905
Score = 25.8 bits (55), Expect = 1.6, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 7/47 (14%)
Query: 117 AEEECEAEYEEDESEGKFPEYDINEGAWQEMPSTSQGQTT-HHYDNW 162
AEE AE E KF GAW E P SQG+ +H+ N+
Sbjct: 521 AEEGAVAEKAESSDGVKF------HGAWVEWPVGSQGENQLYHFANY 561
Score = 25.4 bits (54), Expect = 2.2, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
Query: 55 NLSDDNYEEEE--CEADYDGDGSEGEVQEDNHDTEGQWEDYTGGEWEEMPSTSQGQTGHY 112
N S+ +++E A + EG V E ++G G W E P SQG+ Y
Sbjct: 500 NFSNGTWKDEYLGVNATVNKGAEEGAVAEKAESSDGV---KFHGAWVEWPVGSQGENQLY 556
Query: 113 HY 114
H+
Sbjct: 557 HF 558
>M.Javanica_Scaff1101g012772 on XP_815148 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 882
Score = 25.8 bits (55), Expect = 1.6, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 6/69 (8%)
Query: 46 NSFFGNQNLNLSDDNYEEEECEADYDGDGSEGEVQEDNHDTEGQWEDYTGGEWEEMPSTS 105
+ G + N SD + +E + G++G + ++ + + G W E P +
Sbjct: 489 DGLVGFLSANFSDKTWRDEYLGVNATVKGNDGGAEMTDNGVKFR------GAWAEWPVGA 542
Query: 106 QGQTGHYHY 114
QG+ YH+
Sbjct: 543 QGENQMYHF 551
>M.Javanica_Scaff1101g012772 on XP_814930 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 938
Score = 25.8 bits (55), Expect = 1.7, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 47/111 (42%), Gaps = 7/111 (6%)
Query: 57 SDDNYEEEECEADYDGDGS-EGEVQEDNHDTEGQWEDYTGGEWEEMPSTSQGQTGHYHYE 115
S D+ +++E D GS + E ++++ D+E + E G+ E+ + G
Sbjct: 778 SGDSEDKKESGDSEDKKGSGDSEDKKESGDSEDKKES---GDSEDKKGSGDGAFTPAVSN 834
Query: 116 EAEEECEAEYEEDESEGKFPEYDINEGAWQEMPSTSQGQTTHHYDNWDEDV 166
E E + G F D EG ++ S G+TT D +ED+
Sbjct: 835 ATTHTAEEETVNQSASGTFSITDSTEG---DVSSDENGETTGGADGQEEDI 882
>M.Javanica_Scaff1101g012772 on XP_808179 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 942
Score = 25.8 bits (55), Expect = 1.7, Method: Composition-based stats.
Identities = 34/130 (26%), Positives = 52/130 (40%), Gaps = 31/130 (23%)
Query: 55 NLSDDNYEEEECEADYDGDGSEGEVQEDNHDTEGQWEDYTGGEWEEMPSTSQGQTGHYHY 114
N SD+ + +E + ++G + H+ ++ G W E P SQG+ YH+
Sbjct: 517 NFSDNTWRDEYLGVNATVKDNDGGKKATLHEGSVKFT----GAWAEWPVGSQGENQLYHF 572
Query: 115 EE------AEEECEAEYEED----------ESEGKFPE--YD--------INEGAWQEMP 148
A + E +E E + K E YD E A +E+
Sbjct: 573 ANYNFTLVATVSIDGEPQEGSPISFLGVHLEGKDKLMELSYDSEKKWKLLCGEEAPKELS 632
Query: 149 STSQGQTTHH 158
STS+ QTTHH
Sbjct: 633 STSE-QTTHH 641
>M.Javanica_Scaff1101g012772 on XP_804820 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 954
Score = 25.8 bits (55), Expect = 1.8, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 141 EGAWQEMPSTSQGQTTHHY 159
+GAW E P QGQT +Y
Sbjct: 565 QGAWAEWPVGKQGQTVPYY 583
Score = 23.9 bits (50), Expect = 7.9, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 9/61 (14%)
Query: 55 NLSDDNYEEEECEADYDGDGSEGEVQ-EDNHDTEGQWEDYTGGEWEEMPSTSQGQTGHYH 113
+ SDD + +E + EG + ED + +G W EW P QGQT Y+
Sbjct: 532 DFSDDTWRDEYLGVNATVAKKEGAAKAEDGVNFQGAW-----AEW---PVGKQGQTVPYY 583
Query: 114 Y 114
+
Sbjct: 584 F 584
>M.Javanica_Scaff1101g012772 on XP_820757 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 912
Score = 25.8 bits (55), Expect = 1.8, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 96 GEWEEMPSTSQGQTGHYHY 114
G W E P SQGQ YH+
Sbjct: 567 GAWAEWPVGSQGQNQLYHF 585
Score = 25.4 bits (54), Expect = 2.2, Method: Composition-based stats.
Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Query: 142 GAWQEMPSTSQGQTT-HHYDNWD 163
GAW E P SQGQ +H+ N++
Sbjct: 567 GAWAEWPVGSQGQNQLYHFANYN 589
>M.Javanica_Scaff1101g012772 on XP_817994 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 954
Score = 25.8 bits (55), Expect = 1.9, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 7/61 (11%)
Query: 55 NLSDDNYEEEECEADYDGDGSEGEVQEDNHDTEGQWEDYTG-GEWEEMPSTSQGQTGHYH 113
NLS + +E + + +G + DN T + G G W E P QG+ YH
Sbjct: 526 NLSGSTWRDEYLGVNATVNNKDGATKADNGVT------FKGRGAWAEWPVGEQGENKLYH 579
Query: 114 Y 114
+
Sbjct: 580 F 580
>M.Javanica_Scaff1101g012772 on XP_817382 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 836
Score = 25.8 bits (55), Expect = 2.0, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 96 GEWEEMPSTSQGQTGHYHY 114
G W E P SQGQ YH+
Sbjct: 553 GAWAEWPVGSQGQNQLYHF 571
Score = 24.3 bits (51), Expect = 6.7, Method: Composition-based stats.
Identities = 11/21 (52%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Query: 142 GAWQEMPSTSQGQTT-HHYDN 161
GAW E P SQGQ +H+ N
Sbjct: 553 GAWAEWPVGSQGQNQLYHFAN 573
>M.Javanica_Scaff1101g012772 on XP_816303 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 955
Score = 25.4 bits (54), Expect = 2.2, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 96 GEWEEMPSTSQGQTGHYHY 114
G W E P SQGQ YH+
Sbjct: 564 GAWAEWPVGSQGQNQLYHF 582
Score = 25.4 bits (54), Expect = 2.2, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Query: 141 EGAWQEMPSTSQGQTT-HHYDNWD 163
+GAW E P SQGQ +H+ N++
Sbjct: 563 KGAWAEWPVGSQGQNQLYHFANYN 586
>M.Javanica_Scaff1101g012772 on XP_816821 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 782
Score = 25.4 bits (54), Expect = 2.4, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 9/62 (14%)
Query: 55 NLSDDNYEEEECEADYDGDGSEGEVQEDNHDTEGQWEDYTG--GEWEEMPSTSQGQTGHY 112
N SD + +E G + V++ + ++ D G W E P SQG+ Y
Sbjct: 523 NFSDTTWRDEYL-------GVDATVKKGTNGVAAEYADGVTFRGPWAEWPVGSQGENQLY 575
Query: 113 HY 114
H+
Sbjct: 576 HF 577
>M.Javanica_Scaff1101g012772 on XP_820498 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 382
Score = 25.4 bits (54), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Query: 96 GEWEEMPSTSQGQTGHYHYEEAEEECEAEYEED--ESEGKFPEYDINEGA 143
G W E P QG+ YH+ + A D EG P + G+
Sbjct: 165 GAWAEWPVGRQGENQLYHFANYKFTLVATVSIDGEPKEGPIPVMGVRAGS 214
>M.Javanica_Scaff1101g012772 on XP_818308 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 925
Score = 25.4 bits (54), Expect = 2.6, Method: Composition-based stats.
Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Query: 93 YTG-GEWEEMPSTSQGQTGHYHY 114
+TG G W E P SQG+ YH+
Sbjct: 547 FTGRGAWAEWPVGSQGENQPYHF 569
Score = 24.3 bits (51), Expect = 5.4, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Query: 142 GAWQEMPSTSQGQTT-HHYDNWD 163
GAW E P SQG+ +H+ N++
Sbjct: 551 GAWAEWPVGSQGENQPYHFANYN 573
>M.Javanica_Scaff1101g012772 on XP_821902 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 854
Score = 25.4 bits (54), Expect = 2.6, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 7/60 (11%)
Query: 55 NLSDDNYEEEECEADYDGDGSEGEVQEDNHDTEGQWEDYTGGEWEEMPSTSQGQTGHYHY 114
N S++ + +E + G++G + + T G W E P SQG+ YH+
Sbjct: 535 NFSENTWRDEYLGVNATVKGNDGATKTSDGVT-------FQGAWAEWPVGSQGENQLYHF 587
Score = 25.0 bits (53), Expect = 3.0, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Query: 141 EGAWQEMPSTSQGQTT-HHYDNWD 163
+GAW E P SQG+ +H+ N++
Sbjct: 568 QGAWAEWPVGSQGENQLYHFANYN 591
>M.Javanica_Scaff1101g012772 on XP_820300 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 660
Score = 25.0 bits (53), Expect = 2.9, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 12/65 (18%)
Query: 55 NLSDDNYEEEECEADYDGDGSEGEVQEDNHDTE-GQWEDYTG----GEWEEMPSTSQGQT 109
N S++ + +E G V+++N D E G + G G W E P SQG+
Sbjct: 519 NFSENTWRDEYL-------GVNATVKKENGDGETGATKTSDGVQFHGAWAEWPVGSQGEN 571
Query: 110 GHYHY 114
YH+
Sbjct: 572 QLYHF 576
Score = 24.3 bits (51), Expect = 5.3, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Query: 142 GAWQEMPSTSQGQTT-HHYDNWD 163
GAW E P SQG+ +H+ N++
Sbjct: 558 GAWAEWPVGSQGENQLYHFANYN 580
>M.Javanica_Scaff1101g012772 on XP_812701 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 804
Score = 25.0 bits (53), Expect = 2.9, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 20/50 (40%), Gaps = 2/50 (4%)
Query: 96 GEWEEMPSTSQGQTGHYHYEEAEEECEAEYEED--ESEGKFPEYDINEGA 143
G W E P SQG+ YH+ + A D EG P + G+
Sbjct: 567 GAWAEWPVGSQGENQLYHFANYKFTLVATVSIDGEPKEGPIPVMGVRAGS 616
Score = 24.3 bits (51), Expect = 5.3, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Query: 142 GAWQEMPSTSQGQTT-HHYDNW 162
GAW E P SQG+ +H+ N+
Sbjct: 567 GAWAEWPVGSQGENQLYHFANY 588
>M.Javanica_Scaff1101g012772 on XP_810753 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 955
Score = 25.0 bits (53), Expect = 2.9, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Query: 141 EGAWQEMPSTSQGQTT-HHYDNWD 163
+GAW E P +QGQ +H+ N++
Sbjct: 610 QGAWAEWPVGAQGQNQLYHFANYN 633
Score = 24.6 bits (52), Expect = 4.1, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 96 GEWEEMPSTSQGQTGHYHY 114
G W E P +QGQ YH+
Sbjct: 611 GAWAEWPVGAQGQNQLYHF 629
>M.Javanica_Scaff1101g012772 on XP_821548 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 958
Score = 25.0 bits (53), Expect = 3.0, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Query: 141 EGAWQEMPSTSQGQTT-HHYDNWD 163
+GAW E P +QGQ +H+ N++
Sbjct: 613 QGAWAEWPVGAQGQNQLYHFANYN 636
Score = 24.6 bits (52), Expect = 4.2, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 96 GEWEEMPSTSQGQTGHYHY 114
G W E P +QGQ YH+
Sbjct: 614 GAWAEWPVGAQGQNQLYHF 632
>M.Javanica_Scaff1101g012772 on XP_821293 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 786
Score = 25.0 bits (53), Expect = 3.1, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 96 GEWEEMPSTSQGQTGHYHY 114
G W E P SQG+ YH+
Sbjct: 563 GAWAEWPVGSQGENQLYHF 581
Score = 24.3 bits (51), Expect = 5.4, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Query: 141 EGAWQEMPSTSQGQTT-HHYDN 161
+GAW E P SQG+ +H+ N
Sbjct: 562 QGAWAEWPVGSQGENQLYHFAN 583
>M.Javanica_Scaff1101g012772 on XP_819530 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 904
Score = 25.0 bits (53), Expect = 3.1, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Query: 71 DGDGSEGEVQEDNHDTEGQWEDYTGGEWEEMPSTSQGQTGHYHYEEAEEECEAEYEEDES 130
+GDG + ++ E ++D+E +W+ GG +T++ + + EE + ++
Sbjct: 608 NGDGKKNKLMELSYDSEKKWQLLCGG------NTTKENSNTWEKEETQHVVLLIRNGNQV 661
Query: 131 EGKFPEYDINEGAWQEMPSTSQGQTTHHY 159
+ E +E+ +T +H Y
Sbjct: 662 SAYVDGKQVGEDVPRELENTHSKGISHFY 690
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10921g060240
(51 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1091g012681
(125 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_817389 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.45
XP_812515 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.1
XP_812314 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.8
PF14_0553 Falcipain1 (Cysteine protease) [Plasmodium falciparum] 24 2.9
XP_812514 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.2
XP_804613 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.7
XP_813606 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 6.4
>M.Javanica_Scaff1091g012681 on XP_817389 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 792
Score = 26.6 bits (57), Expect = 0.45, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 69 HHKSGAETAKMNVNYTVRKESDPIGLFGISNLFSSSATELSLVKAKTIK 117
+H GAE AK VN+ P+G G + L+ + +LV +I+
Sbjct: 490 NHNGGAEKAKDGVNFRGAWAEWPVGRQGENQLYHFANCNFTLVATVSIE 538
>M.Javanica_Scaff1091g012681 on XP_812515 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 931
Score = 24.6 bits (52), Expect = 2.1, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Query: 14 LTSIFVENKQNKPLLKNKSNFIFLTFSNDSDSNLEVNL----VLGEKDLHKKQLIL 65
L+ ++ NK+ + +S FI T ND D N +V L V EKD K +L L
Sbjct: 343 LSRVWGNNKKGEEAKTVRSGFITATVGNDGD-NKKVMLVTLPVYAEKDKEKGKLHL 397
>M.Javanica_Scaff1091g012681 on XP_812314 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 923
Score = 24.3 bits (51), Expect = 2.8, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 6/63 (9%)
Query: 14 LTSIFVENKQNKPLLKNKSNFIFLTFSNDSDS------NLEVNLVLGEKDLHKKQLILTS 67
L+ ++ NK+ +S FI TF ND D L V G K+ K L LT
Sbjct: 338 LSRVWGNNKKGGKEKAVRSGFITATFGNDGDKRNVMLVTLPVYAEKGGKEKGKLHLWLTD 397
Query: 68 KHH 70
H
Sbjct: 398 NTH 400
>M.Javanica_Scaff1091g012681 on PF14_0553 Falcipain1 (Cysteine protease) [Plasmodium falciparum]
Length = 569
Score = 24.3 bits (51), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 47 LEVN-LVLGEKDLHKKQLILTSKHHKSGAETAKMNVNYTVRKESDPI 92
LE+N L+L E+ KK ++ + + GA MN +KE DPI
Sbjct: 171 LEINKLILREEKDDKKVYLINDNYDEKGALEIGMNEEMKYKKE-DPI 216
>M.Javanica_Scaff1091g012681 on XP_812514 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 925
Score = 23.9 bits (50), Expect = 4.2, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Query: 14 LTSIFVENKQNKPLLKNKSNFIFLTFSNDSDSNLEVNL----VLGEKDLHKKQLIL 65
L+ ++ NK+ + +S FI T ND D N +V L V EKD K +L L
Sbjct: 342 LSRVWGNNKKGGNVKLVRSGFITATVGNDGD-NKKVMLVTLPVYAEKDKEKGKLHL 396
>M.Javanica_Scaff1091g012681 on XP_804613 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 881
Score = 23.5 bits (49), Expect = 4.7, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 14 LTSIFVENKQNKPLLKNKSNFIFLTFSNDSDSN--LEVNL-VLGEKDLHKKQLIL 65
L+ ++ NK+ + +S FI T ND D + V L V EK++ K +L L
Sbjct: 341 LSRVWGNNKKGEEAKAVRSGFITATVGNDGDKRNVMLVTLPVYAEKNVEKGKLHL 395
>M.Javanica_Scaff1091g012681 on XP_813606 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 930
Score = 23.1 bits (48), Expect = 6.4, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 6/63 (9%)
Query: 14 LTSIFVENKQNKPLLKNKSNFIFLTFSNDSDS------NLEVNLVLGEKDLHKKQLILTS 67
L+ ++ NK+ + +S FI T ND D L V G K+ K L LT
Sbjct: 344 LSRVWGNNKKGEEAKTVRSGFITATVGNDGDKRNVMLVTLPVYAEKGGKEKGKLHLWLTD 403
Query: 68 KHH 70
H
Sbjct: 404 NTH 406
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1128g013027
(75 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_828097 VSG (Establishment) [Trypanosoma brucei] 22 4.1
>M.Javanica_Scaff1128g013027 on XP_828097 VSG (Establishment) [Trypanosoma brucei]
Length = 520
Score = 22.3 bits (46), Expect = 4.1, Method: Composition-based stats.
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 3 LILFISFLLFNYLIVEGAED 22
LIL+I L F +VE A D
Sbjct: 15 LILYIGVLFFGLNLVEAATD 34
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1128g013026
(191 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609034 variant erythrocyte surface antigen-1, alpha subun... 27 1.1
XP_808394 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.2
XP_805383 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.3
XP_808758 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.4
XP_805710 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.0
XP_820670 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.2
XP_814753 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.4
>M.Javanica_Scaff1128g013026 on XP_001609034 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1313
Score = 26.6 bits (57), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/85 (22%), Positives = 25/85 (29%)
Query: 83 TTTPTTTTTPTTTTPTTTTTPTTTTPTTTTTPTTTTPTTTTTPTTTTPTTTTTPTTTTET 142
T + T P T +TT T + T +T
Sbjct: 390 TAHRDSFNKEATVFPKDGTGSSTTGHIGETNQNKIGAIFKLYVLSCAYFTGLQKRNSTAL 449
Query: 143 TTTPTTTTTPTTTTETTTSTTTTPY 167
+TTPT T P T E + PY
Sbjct: 450 STTPTATNNPKTIREILYWLSALPY 474
>M.Javanica_Scaff1128g013026 on XP_808394 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 912
Score = 25.8 bits (55), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 65 PTTTTETTTTPTT--TTTPTTTTPTTTTTPTTTTPTTTTTPTTTTPTTTTTPTTTTPTTT 122
P T TT+T T + TP T PT T ++ + +TP+TT +++ P T +
Sbjct: 711 PANDTVTTSTQATVPSLTPAGTQPTEQATLNASSVPSGSTPSTTAESSSAEPEQATLNAS 770
Query: 123 TTPTTTTPTT 132
+ P+ P+T
Sbjct: 771 SVPSGGAPST 780
>M.Javanica_Scaff1128g013026 on XP_805383 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 414
Score = 25.4 bits (54), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 21/50 (42%), Gaps = 6/50 (12%)
Query: 31 KTCDYGEVCEYGNCVPEPTPTTPATTTETTTTTT-----PTTTTETTTTP 75
K+ ++ C +G CV E +PT T+ T T P +TE
Sbjct: 312 KSLEFVRFC-FGACVQESSPTAAGQKTKVTVTNVFLYNRPLNSTEMRAIK 360
>M.Javanica_Scaff1128g013026 on XP_808758 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 823
Score = 25.4 bits (54), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/156 (19%), Positives = 49/156 (31%), Gaps = 9/156 (5%)
Query: 21 EKCCEDEYNCKTCDYGEVCEYGNCVPEPTPTTPATTTETTTTTTPTTTTETTTTPTTTTT 80
EK C +YN D+ + + + + AT T T +
Sbjct: 645 EKICHTKYNESLFDFHRISHF--YIGGDSKDQSATGGYVTVTNVMLYNEKLWGNDLDELH 702
Query: 81 PTTTTPTTTTTPTTTTPTTTTTPTTTTPTTTTTPTTTTPTTTTTPTTTTPTTTTTPTTTT 140
+ P+ T T T + + + + TT P + T
Sbjct: 703 ASKVN-----IPSLGVEEQPTGQVTGTGLSVASESKSEETTA--PLVENGDSEDVGTAPV 755
Query: 141 ETTTTPTTTTTPTTTTETTTSTTTTPYPCDQYGNCP 176
+TTP T P+ + TT S T Q+G+ P
Sbjct: 756 NASTTPGGTKIPSKSNATTPSDTGILLEHGQFGDLP 791
>M.Javanica_Scaff1128g013026 on XP_805710 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 753
Score = 25.0 bits (53), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 18/45 (40%), Gaps = 10/45 (22%)
Query: 20 DEKCCEDEYNCKTCDYGEVCEYGNCVPEPTPTTPATTTETTTTTT 64
DEK E + C +G CV E +PT T+ T T
Sbjct: 649 DEKSLEFVHFC----------FGACVQESSPTAAGQKTKVTVTNV 683
>M.Javanica_Scaff1128g013026 on XP_820670 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 883
Score = 25.0 bits (53), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 40/108 (37%), Gaps = 5/108 (4%)
Query: 51 TTPATTTETTTTTTPTTTT---ETTTTPTTT-TTPTTTTPTTTTTPTTTTPTTTTTPTTT 106
P TE TT T T E TPTT+ +P + P + + ++ P
Sbjct: 703 NRPLDGTEITTLAKNTITNPKPEDPKTPTTSPLSPAASAPDVEVSLHRSN-SSRQLPLEE 761
Query: 107 TPTTTTTPTTTTPTTTTTPTTTTPTTTTTPTTTTETTTTPTTTTTPTT 154
P ++ TTTP++ +PT T + T +P T
Sbjct: 762 EPLRANIGAGAGGVSSAVSVTTTPSSDASPTVATGSGDTMLGNGSPQT 809
Score = 25.0 bits (53), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/84 (19%), Positives = 29/84 (34%), Gaps = 7/84 (8%)
Query: 49 TPTTPATTTETTTTTTPTTTTETTTTPTTTTTPTTTTPTTTTTPTTTTPTTTTTPTTTTP 108
+P +PA + P + ++ P P ++ TTTP
Sbjct: 733 SPLSPAASA-------PDVEVSLHRSNSSRQLPLEEEPLRANIGAGAGGVSSAVSVTTTP 785
Query: 109 TTTTTPTTTTPTTTTTPTTTTPTT 132
++ +PT T + T +P T
Sbjct: 786 SSDASPTVATGSGDTMLGNGSPQT 809
>M.Javanica_Scaff1128g013026 on XP_814753 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 882
Score = 25.0 bits (53), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/84 (19%), Positives = 29/84 (34%), Gaps = 7/84 (8%)
Query: 49 TPTTPATTTETTTTTTPTTTTETTTTPTTTTTPTTTTPTTTTTPTTTTPTTTTTPTTTTP 108
+P +PA + P + ++ P P ++ TTTP
Sbjct: 732 SPRSPAASA-------PDVEVSLHRSNSSGQLPLEEEPLRANIGAGAGGVSSAVSVTTTP 784
Query: 109 TTTTTPTTTTPTTTTTPTTTTPTT 132
++ +PT T + T +P T
Sbjct: 785 SSDASPTVATGSGDTMRGNGSPQT 808
Score = 24.6 bits (52), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 40/108 (37%), Gaps = 5/108 (4%)
Query: 51 TTPATTTETTTTTTPTTTT---ETTTTPTTT-TTPTTTTPTTTTTPTTTTPTTTTTPTTT 106
P TE TT T T E TPTT+ +P + P + + ++ P
Sbjct: 702 NRPLDGTEITTLAKNTITNPKPEDPKTPTTSPRSPAASAPDVEVSLHRSN-SSGQLPLEE 760
Query: 107 TPTTTTTPTTTTPTTTTTPTTTTPTTTTTPTTTTETTTTPTTTTTPTT 154
P ++ TTTP++ +PT T + T +P T
Sbjct: 761 EPLRANIGAGAGGVSSAVSVTTTPSSDASPTVATGSGDTMRGNGSPQT 808
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff11252g061261
(102 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff11329g061489
(50 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAB37326 PfSUB2 (Proteases) [Plasmodium falciparum] 24 0.32
>M.Javanica_Scaff11329g061489 on CAB37326 PfSUB2 (Proteases) [Plasmodium falciparum]
Length = 1342
Score = 24.3 bits (51), Expect = 0.32, Method: Composition-based stats.
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 28 NHQQQTAHLISSGHHQASLLP 48
N+ ++ H+++ GHH S +P
Sbjct: 930 NYGHKSVHILAPGHHIYSTIP 950
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff11243g061236
(90 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10622g059358
(166 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_810068 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.1
XP_815749 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.0
AAM64207 RAP3 (Invasion) [Plasmodium falciparum] 24 6.3
>M.Javanica_Scaff10622g059358 on XP_810068 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1147
Score = 26.2 bits (56), Expect = 1.1, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 131 YQIVRQIKQRRW--ISPYNLLNNKRLDRNLFN 160
YQ+V ++ W I ++NK+ D+NLFN
Sbjct: 734 YQVVLKMDYDEWTVIVDKKEIHNKKYDKNLFN 765
>M.Javanica_Scaff10622g059358 on XP_815749 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1053
Score = 25.4 bits (54), Expect = 2.0, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 131 YQIVRQIKQRRW--ISPYNLLNNKRLDRNLFN 160
YQ+V ++ +W + + ++N R D NLFN
Sbjct: 641 YQVVLKMNYDKWTVVVDKDEIHNMRYDENLFN 672
>M.Javanica_Scaff10622g059358 on AAM64207 RAP3 (Invasion) [Plasmodium falciparum]
Length = 400
Score = 23.9 bits (50), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 1 MSFFLNYFVLFFVGTILSFVSSENGQIS----GIDKNAFRMSFGKRS 43
+SF +Y +L ++GT ++ +S+ + + I KN R+ KRS
Sbjct: 214 LSFMRDYALLIYLGTKENYYNSDITEYAQGNYNISKNRTRLGLKKRS 260
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1115g012899
(80 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351561 PfEMP1 (Establishment) [Plasmodium falciparum] 26 0.26
XP_001348946 PfEMP1 (Establishment) [Plasmodium falciparum] 26 0.26
XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum] 23 2.7
XP_001349437 PfEMP1 (Establishment) [Plasmodium falciparum] 23 3.1
XP_001350935 PfEMP1 (Establishment) [Plasmodium falciparum] 23 3.7
XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum] 23 4.0
>M.Javanica_Scaff1115g012899 on XP_001351561 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3553
Score = 25.8 bits (55), Expect = 0.26, Method: Composition-based stats.
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 44 MDVRRVREKRQWWGGRGGGRWRG 66
+D+ V +++ WWG W G
Sbjct: 1869 IDITNVEQRKPWWGKNAEAIWDG 1891
>M.Javanica_Scaff1115g012899 on XP_001348946 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3553
Score = 25.8 bits (55), Expect = 0.26, Method: Composition-based stats.
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 44 MDVRRVREKRQWWGGRGGGRWRG 66
+D+ V +++ WWG W G
Sbjct: 1869 IDITNVEQRKPWWGKNAEAIWDG 1891
>M.Javanica_Scaff1115g012899 on XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1711
Score = 23.1 bits (48), Expect = 2.7, Method: Composition-based stats.
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 50 REKRQWWGGRGGGRWRG 66
R+++++WG G W+G
Sbjct: 996 RQRQEFWGTYGKDIWKG 1012
>M.Javanica_Scaff1115g012899 on XP_001349437 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2231
Score = 22.7 bits (47), Expect = 3.1, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 37 FVDGRVWMDVRRVREKRQWWGGRGGGRWRG 66
F +G D + V ++++WW W G
Sbjct: 1099 FSNGEKPDDKKGVEQRKEWWKENAKHIWHG 1128
>M.Javanica_Scaff1115g012899 on XP_001350935 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2268
Score = 22.7 bits (47), Expect = 3.7, Method: Composition-based stats.
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 45 DVRRVREKRQWWGGRGGGRWRG 66
DV + +QWW G W G
Sbjct: 1162 DVGQKTTAKQWWDDNGQHIWNG 1183
>M.Javanica_Scaff1115g012899 on XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3954
Score = 22.7 bits (47), Expect = 4.0, Method: Composition-based stats.
Identities = 6/16 (37%), Positives = 8/16 (50%)
Query: 51 EKRQWWGGRGGGRWRG 66
E+ +WW G W G
Sbjct: 1896 EREKWWKNHGPSIWNG 1911
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10839g059997
(110 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff11337g061522
(85 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_648254 SREHP (Adhesin) [Entamoeba histolytica] 27 0.17
XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum] 26 0.34
XP_810288 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.9
XP_818662 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.8
XP_001350935 PfEMP1 (Establishment) [Plasmodium falciparum] 23 3.8
XP_804895 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 7.4
>M.Javanica_Scaff11337g061522 on XP_648254 SREHP (Adhesin) [Entamoeba histolytica]
Length = 233
Score = 26.6 bits (57), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 12 TNSRTPENNPNFSPNPKP--VPEIFANPKPDTRNENFITRNPKPVPEIFANPKPDTRNEN 69
++S P+N P S + KP PE ++ KPD + E + P PE ++ KPD + E
Sbjct: 102 SSSDKPDNKPEASSSDKPDNKPEASSSDKPDNKPEASSSDKPDNKPEASSSDKPDNKPEA 161
Query: 70 FITRNP 75
T P
Sbjct: 162 SSTNKP 167
Score = 22.7 bits (47), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 12 TNSRTPENNPNFSPNPKP--VPEIFANPKPDTRNENFITRNPKPVPEIFANPKPDTRNEN 69
++S P+N P S + KP PE ++ KPD + E + P PE + KP+ + N
Sbjct: 114 SSSDKPDNKPEASSSDKPDNKPEASSSDKPDNKPEASSSDKPDNKPEASSTNKPEASSTN 173
Score = 21.9 bits (45), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 10/60 (16%)
Query: 17 PENNPNFSPNPKP----------VPEIFANPKPDTRNENFITRNPKPVPEIFANPKPDTR 66
P+N P S + KP PE ++ KPD + E + P PE ++ KPD +
Sbjct: 87 PDNKPEASSSDKPEASSSDKPDNKPEASSSDKPDNKPEASSSDKPDNKPEASSSDKPDNK 146
>M.Javanica_Scaff11337g061522 on XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2264
Score = 25.8 bits (55), Expect = 0.34, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 36 NPKPDTRNENFITRNPKPVPEIFANPKPDT 65
+PK D+ ++N T PKP +F NP T
Sbjct: 1743 SPKADSGDDNPETPQPKPPSNVFDNPHVKT 1772
Score = 22.7 bits (47), Expect = 4.8, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Query: 18 ENNPNFSPNPKPVPEIFANPKPDT 41
++NP +P PKP +F NP T
Sbjct: 1750 DDNPE-TPQPKPPSNVFDNPHVKT 1772
>M.Javanica_Scaff11337g061522 on XP_810288 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 874
Score = 23.5 bits (49), Expect = 1.9, Method: Composition-based stats.
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 20 NPNFSPNPKPVPE 32
NPN +P P PV E
Sbjct: 722 NPNKAPTPSPVKE 734
>M.Javanica_Scaff11337g061522 on XP_818662 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1038
Score = 23.1 bits (48), Expect = 2.8, Method: Composition-based stats.
Identities = 7/22 (31%), Positives = 15/22 (68%)
Query: 15 RTPENNPNFSPNPKPVPEIFAN 36
R+ EN N++P+ +P+ ++ N
Sbjct: 325 RSTENGYNWNPDGEPITRVWGN 346
>M.Javanica_Scaff11337g061522 on XP_001350935 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2268
Score = 22.7 bits (47), Expect = 3.8, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 36 NPKPDTRNENFITRNPKPVPEIFANPKPDTRNENFI 71
NPKP T ++ NP V + + + PD + + I
Sbjct: 2168 NPKP-TNEFTYVDSNPNQVDDTYVDSNPDNSSMDTI 2202
>M.Javanica_Scaff11337g061522 on XP_804895 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 787
Score = 21.9 bits (45), Expect = 7.4, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 18/37 (48%)
Query: 26 NPKPVPEIFANPKPDTRNENFITRNPKPVPEIFANPK 62
+P V +F +P E ++ KPVP+ + P+
Sbjct: 668 SPMTVTNVFLYNRPLNPTEMAAIKDRKPVPKRVSEPQ 704
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff113g002109
(1274 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum] 27 6.7
XP_001349036 PfEMP1 (Establishment) [Plasmodium falciparum] 27 9.4
>M.Javanica_Scaff113g002109 on XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2238
Score = 27.3 bits (59), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 45/123 (36%), Gaps = 23/123 (18%)
Query: 168 PKYKSYVVCQYKPPGNVYTAC---VYRAGRNINKKRRN----------SDDFNDSNNSSI 214
PKYK+ + +P GN TA +G N N SD ND N I
Sbjct: 1845 PKYKTLIEVVLEPSGNNTTASGNNTTASGNNTTASGNNTTASGNNTTASDTQNDIQNDGI 1904
Query: 215 ILTTEQV-TDISKKVLELLKPSIVEIIKTCISEIIPEILNKLP---------NFNNNTNT 264
T +DI K + P + T + I +L P N +NNTNT
Sbjct: 1905 PSDTPNTPSDIPKTPSDTPPPITDDEWNTLKDDFISNMLQNQPNTEPNMLGYNVDNNTNT 1964
Query: 265 TQS 267
T S
Sbjct: 1965 TMS 1967
>M.Javanica_Scaff113g002109 on XP_001349036 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2192
Score = 26.9 bits (58), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 44/100 (44%), Gaps = 16/100 (16%)
Query: 168 PKYKSYVVCQYKPPGNVYTACVYRAGRNINKKRRNSDDFNDSNNSSIILTTEQVTDISKK 227
PKYK+ + +P GN TA +G+N SD ND N I + ++TD
Sbjct: 1868 PKYKTLIEVVLEPSGNNTTA----SGKNT-----PSDTQNDIQNDGI--PSSKITD---N 1913
Query: 228 VLELLKPSIVEIIKTCISEIIPEILNKLPNFNNNTNTTQS 267
LK + + P IL+ N +NNTNTT S
Sbjct: 1914 EWNTLKDDFISNMLQNEPNTEPNILHD--NLDNNTNTTMS 1951
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff11230g061206
(405 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_818295 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 5.2
>M.Javanica_Scaff11230g061206 on XP_818295 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 922
Score = 25.8 bits (55), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 187 FDYCSKPVENGNGPVFLTLPELNAPMQIFIQAHNFV 222
+D VE+G+ P +LT EL+ + ++ HN V
Sbjct: 584 YDNMEWSVEHGSYPRYLTKWELDKTYHVVLKMHNGV 619
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1131g013064
(73 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350595 PfEMP1 (Establishment) [Plasmodium falciparum] 25 0.59
AAL38218 PfNBP1 (Adhesin) [Plasmodium falciparum] 24 1.2
AAL38220 PfNBP1 (Adhesin) [Plasmodium falciparum] 24 1.2
AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum] 24 1.2
AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum] 24 1.2
AAL38222 PfNBP1 (Adhesin) [Plasmodium falciparum] 24 1.2
XP_654447 Igl1 (Adhesin) [Entamoeba histolytica] 23 2.5
XP_652394 Igl2 (Adhesin) [Entamoeba histolytica] 23 2.5
XP_001349030 PfEMP1 (Establishment) [Plasmodium falciparum] 22 5.4
>M.Javanica_Scaff1131g013064 on XP_001350595 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2256
Score = 24.6 bits (52), Expect = 0.59, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 31 DEIIDRFLQNYPQYANMDFSGGHV 54
DE I LQN P+ D+S G +
Sbjct: 1953 DEFISNMLQNQPKDVPNDYSSGDI 1976
>M.Javanica_Scaff1131g013064 on AAL38218 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2977
Score = 23.9 bits (50), Expect = 1.2, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 8/47 (17%)
Query: 25 TPSNNADEIIDRFLQNY---PQYANMDFSGGHVQALLNIIQNYPISK 68
T NN DEI + F+Q+Y +Y++ FS + LN IQ I +
Sbjct: 1983 TYKNNIDEIYNVFIQSYNLIQKYSSEIFS-----STLNYIQTKEIKE 2024
>M.Javanica_Scaff1131g013064 on AAL38220 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2957
Score = 23.9 bits (50), Expect = 1.2, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 8/47 (17%)
Query: 25 TPSNNADEIIDRFLQNY---PQYANMDFSGGHVQALLNIIQNYPISK 68
T NN DEI + F+Q+Y +Y++ FS + LN IQ I +
Sbjct: 1973 TYKNNIDEIYNVFIQSYNLIQKYSSEIFS-----STLNYIQTKEIKE 2014
>M.Javanica_Scaff1131g013064 on AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2965
Score = 23.9 bits (50), Expect = 1.2, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 8/47 (17%)
Query: 25 TPSNNADEIIDRFLQNY---PQYANMDFSGGHVQALLNIIQNYPISK 68
T NN DEI + F+Q+Y +Y++ FS + LN IQ I +
Sbjct: 1979 TYKNNIDEIYNVFIQSYNLIQKYSSEIFS-----STLNYIQTKEIKE 2020
>M.Javanica_Scaff1131g013064 on AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2969
Score = 23.9 bits (50), Expect = 1.2, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 8/47 (17%)
Query: 25 TPSNNADEIIDRFLQNY---PQYANMDFSGGHVQALLNIIQNYPISK 68
T NN DEI + F+Q+Y +Y++ FS + LN IQ I +
Sbjct: 1975 TYKNNIDEIYNVFIQSYNLIQKYSSEIFS-----STLNYIQTKEIKE 2016
>M.Javanica_Scaff1131g013064 on AAL38222 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2976
Score = 23.9 bits (50), Expect = 1.2, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 8/47 (17%)
Query: 25 TPSNNADEIIDRFLQNY---PQYANMDFSGGHVQALLNIIQNYPISK 68
T NN DEI + F+Q+Y +Y++ FS + LN IQ I +
Sbjct: 1986 TYKNNIDEIYNVFIQSYNLIQKYSSEIFS-----STLNYIQTKEIKE 2027
>M.Javanica_Scaff1131g013064 on XP_654447 Igl1 (Adhesin) [Entamoeba histolytica]
Length = 1101
Score = 22.7 bits (47), Expect = 2.5, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 4/31 (12%)
Query: 9 CFPCVHVMPH----GGEGTSTPSNNADEIID 35
C PC MPH GEG T + ++ D
Sbjct: 1049 CIPCSRHMPHCTKCTGEGECTTCEDGWKLKD 1079
>M.Javanica_Scaff1131g013064 on XP_652394 Igl2 (Adhesin) [Entamoeba histolytica]
Length = 1105
Score = 22.7 bits (47), Expect = 2.5, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 4/31 (12%)
Query: 9 CFPCVHVMPH----GGEGTSTPSNNADEIID 35
C PC MPH GEG T + ++ D
Sbjct: 1053 CIPCSRHMPHCTKCTGEGECTTCEDGWKLKD 1083
>M.Javanica_Scaff1131g013064 on XP_001349030 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 21.9 bits (45), Expect = 5.4, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 31 DEIIDRFLQNYPQYANMDFSGGHV 54
D+ I LQN P D+S G +
Sbjct: 1892 DDFISNMLQNEPNDIPNDYSSGDI 1915
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1135g013104
(140 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_843643 VSG (Establishment) [Trypanosoma brucei] 28 0.14
XP_001609450 variant erythrocyte surface antigen-1, alpha subun... 23 6.1
>M.Javanica_Scaff1135g013104 on XP_843643 VSG (Establishment) [Trypanosoma brucei]
Length = 516
Score = 28.5 bits (62), Expect = 0.14, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 21/46 (45%)
Query: 23 SRCSLFEEGRITELNPGCFDELNSQNKTLVYCRLKCEESDEATVLR 68
S+C LF E N G F S + Y LK E D++T L+
Sbjct: 207 SKCGLFRHEANPESNGGIFITAASSKPSFGYGMLKIEAEDQSTGLK 252
>M.Javanica_Scaff1135g013104 on XP_001609450 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1309
Score = 23.5 bits (49), Expect = 6.1, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 44 LNSQNKTLVYCRL-KCEESDEATVLRKEPSNNHICAS 79
LN+ N L C KC D+ + +PSN +C +
Sbjct: 811 LNAINNLLSICNSPKCHSCDQHSTKCGQPSNPTVCPA 847
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10846g060020
(50 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_808432 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 3.4
>M.Javanica_Scaff10846g060020 on XP_808432 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 831
Score = 21.6 bits (44), Expect = 3.4, Method: Composition-based stats.
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 21 AGKQIHVEVKIKDDWEEKREFIYLTN 46
A +++H V++ EEK+ LTN
Sbjct: 700 AAEELHTAVEVTATGEEKQTATQLTN 725
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff10g000275
(69 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_807448 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 0.78
XP_820382 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 0.81
XP_001351318 PfEMP1 (Establishment) [Plasmodium falciparum] 24 0.99
XP_808495 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.9
XP_808582 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.9
XP_806226 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.0
XP_818220 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 3.6
XP_001351561 PfEMP1 (Establishment) [Plasmodium falciparum] 22 7.1
XP_001348946 PfEMP1 (Establishment) [Plasmodium falciparum] 22 7.1
XP_001611147 variant erythrocyte surface antigen-1, alpha subun... 21 8.8
XP_001350595 PfEMP1 (Establishment) [Plasmodium falciparum] 21 9.4
>M.Javanica_Scaff10g000275 on XP_807448 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 831
Score = 24.3 bits (51), Expect = 0.78, Method: Composition-based stats.
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 28 GCGGGGNVLDDDS 40
GCGG G V+DD +
Sbjct: 246 GCGGSGAVMDDGT 258
>M.Javanica_Scaff10g000275 on XP_820382 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 729
Score = 24.3 bits (51), Expect = 0.81, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 8/43 (18%)
Query: 1 MSTKFFKLIQLFLFFVFIIKIVNCGNCGCGGGGNVLDDDSDDA 43
MS + F L L FV CG GG N + +S +A
Sbjct: 39 MSRRVFTSAVLLLIFVL--------TCGSGGTSNAVKSNSGNA 73
>M.Javanica_Scaff10g000275 on XP_001351318 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2169
Score = 23.9 bits (50), Expect = 0.99, Method: Composition-based stats.
Identities = 8/12 (66%), Positives = 8/12 (66%)
Query: 22 VNCGNCGCGGGG 33
VNC NC GGG
Sbjct: 1364 VNCKNCNSSGGG 1375
>M.Javanica_Scaff10g000275 on XP_808495 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 753
Score = 23.1 bits (48), Expect = 1.9, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 16/43 (37%), Gaps = 7/43 (16%)
Query: 1 MSTKFFKLIQLFLFFVFIIKIVNCGNCGCGGGGNVLDDDSDDA 43
MS F L L V + CG GG N ++ S D
Sbjct: 39 MSRHLFNSAMLLLLVVMMC-------CGSGGASNAVESKSGDG 74
>M.Javanica_Scaff10g000275 on XP_808582 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 786
Score = 23.1 bits (48), Expect = 1.9, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 16/43 (37%), Gaps = 7/43 (16%)
Query: 1 MSTKFFKLIQLFLFFVFIIKIVNCGNCGCGGGGNVLDDDSDDA 43
MS F L L V + CG GG N ++ S D
Sbjct: 32 MSRHLFNSAMLLLLVVMMC-------CGSGGASNAVESKSGDG 67
>M.Javanica_Scaff10g000275 on XP_806226 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 728
Score = 23.1 bits (48), Expect = 2.0, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 7/43 (16%)
Query: 1 MSTKFFKLIQLFLFFVFIIKIVNCGNCGCGGGGNVLDDDSDDA 43
MS + F L L V + CG GG V++ S DA
Sbjct: 39 MSRRVFNSAVLLLLVVMMC-------CGTGGAAAVVEGKSGDA 74
>M.Javanica_Scaff10g000275 on XP_818220 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 768
Score = 22.3 bits (46), Expect = 3.6, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Query: 18 IIKIVNCGNCGCGGGGNVLDDDSDDA 43
++ +V C CG GG V++ +S DA
Sbjct: 49 LLLLVMC--CGTGGAAAVVEGNSGDA 72
>M.Javanica_Scaff10g000275 on XP_001351561 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3553
Score = 21.6 bits (44), Expect = 7.1, Method: Composition-based stats.
Identities = 8/11 (72%), Positives = 9/11 (81%)
Query: 32 GGNVLDDDSDD 42
GGNVLDD D+
Sbjct: 3311 GGNVLDDGMDE 3321
>M.Javanica_Scaff10g000275 on XP_001348946 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3553
Score = 21.6 bits (44), Expect = 7.1, Method: Composition-based stats.
Identities = 8/11 (72%), Positives = 9/11 (81%)
Query: 32 GGNVLDDDSDD 42
GGNVLDD D+
Sbjct: 3311 GGNVLDDGMDE 3321
>M.Javanica_Scaff10g000275 on XP_001611147 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1304
Score = 21.2 bits (43), Expect = 8.8, Method: Composition-based stats.
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 26 NCGCGGGGN 34
NC C GGG+
Sbjct: 187 NCSCSGGGS 195
>M.Javanica_Scaff10g000275 on XP_001350595 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2256
Score = 21.2 bits (43), Expect = 9.4, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 2 STKFFKLIQLFLFFVFIIKIVNCGN 26
+TKFFK I+ F F+ + +C N
Sbjct: 1369 NTKFFKEIENRSFDQFLTSLKHCKN 1393
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1078g012580
(277 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609667 variant erythrocyte surface antigen-1, alpha subun... 31 0.063
XP_001609040 variant erythrocyte surface antigen-1, alpha subun... 30 0.16
XP_001609033 variant erythrocyte surface antigen-1, alpha subun... 29 0.26
XP_001609041 variant erythrocyte surface antigen-1, alpha subun... 29 0.27
XP_001608668 variant erythrocyte surface antigen-1, alpha subun... 28 0.55
XP_001608785 variant erythrocyte surface antigen-1, alpha subun... 28 0.76
XP_001611897 variant erythrocyte surface antigen-1, alpha subun... 27 1.2
XP_001609751 variant erythrocyte surface antigen-1, alpha subun... 27 1.3
XP_001611442 variant erythrocyte surface antigen-1, alpha subun... 26 3.1
XP_001609034 variant erythrocyte surface antigen-1, alpha subun... 26 3.2
XP_001610567 variant erythrocyte surface antigen-1, alpha subun... 25 5.4
XP_965997 PfEMP1 (Establishment) [Plasmodium falciparum] 25 8.9
>M.Javanica_Scaff1078g012580 on XP_001609667 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1303
Score = 31.2 bits (69), Expect = 0.063, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 12/80 (15%)
Query: 66 EEIDEVENRISNLEESKQLKKLRKVEDGIKKKIDKLEKENDKKLKKKLEEARKE---GKI 122
E+I EV ++ N +E+ + +K +++ G++KK+ ++ KK LEEARKE G+
Sbjct: 666 EKIGEVVVQLGNAQEALERRKGEEIK-GVQKKL--------QEAKKGLEEARKELETGED 716
Query: 123 FWEDKLENLQIENNKLIDEG 142
ED L+ + +L + G
Sbjct: 717 LDEDDLKEAKEALGELTNGG 736
>M.Javanica_Scaff1078g012580 on XP_001609040 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1335
Score = 30.0 bits (66), Expect = 0.16, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 34/51 (66%), Gaps = 5/51 (9%)
Query: 86 KLRKVEDGIKKKIDKLEKENDKKLKKKLEEARKEGKIFW-----EDKLENL 131
++ + DG+ K ++ L++ +K++K++ +EA+K +F+ E+KLEN+
Sbjct: 771 RISEAIDGLHKVLEILKEGVEKQIKEEAKEAKKTLDVFFKLTNDENKLENV 821
>M.Javanica_Scaff1078g012580 on XP_001609033 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1270
Score = 29.3 bits (64), Expect = 0.26, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 26/115 (22%)
Query: 50 EGYKKLEKKLKYWQLKEEIDEVENRISNLEESKQLKKLRKVEDGIKKKIDKLEKENDKKL 109
EG + K+K L E I EV ++ N +E+ + K K +G+K ++K +KE
Sbjct: 621 EGADSVAAKVK--ALLEAIGEVVVQLGNAQEALEKKAENKAIEGVKGALEKAKKE----- 673
Query: 110 KKKLEEARKEGKIFWED---------KLENLQIENNKLIDEGLLNIEEERKELMR 155
LE A+ E ED KLE +E + E L+N E+ KEL +
Sbjct: 674 ---LEGAKGE-----EDDGVLTALYAKLEEEGVEWHG--QEELVNAREKIKELTK 718
>M.Javanica_Scaff1078g012580 on XP_001609041 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1318
Score = 29.3 bits (64), Expect = 0.27, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 28/108 (25%)
Query: 39 NDEEEME---KIETEGYKKLEKKLKYWQLKEEIDEVENRISN--LEESKQL--------- 84
N +E +E K EG K+ +K K +L E + +V++ + N LEE+K
Sbjct: 703 NAQEALEGKDKGAIEGVKRELEKAKE-ELVEAVKQVKDAVENCGLEEAKNKLEELTGNGG 761
Query: 85 -------------KKLRKVEDGIKKKIDKLEKENDKKLKKKLEEARKE 119
K+ DG+ K ++ L+KE +K+LK+ LE+ + +
Sbjct: 762 LDKANSGEYDPGKNKISAAIDGVCKALEALKKEMEKQLKEVLEKEQSD 809
Score = 25.8 bits (55), Expect = 3.4, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 13/74 (17%)
Query: 64 LKEEIDEVENRISNLEESKQLKKLRKVEDGIKKKIDKLEKENDKKLKKKLEEARKEGKIF 123
L E+I EV ++ N +E+ + K +E G+K++++K ++E L EA K+ K
Sbjct: 690 LLEKIGEVVVQLGNAQEALEGKDKGAIE-GVKRELEKAKEE--------LVEAVKQVK-- 738
Query: 124 WEDKLENLQIENNK 137
D +EN +E K
Sbjct: 739 --DAVENCGLEEAK 750
>M.Javanica_Scaff1078g012580 on XP_001608668 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1337
Score = 28.5 bits (62), Expect = 0.55, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 11/84 (13%)
Query: 46 KIETEGYKKLEKK-LKYWQLKEEIDEVENRISNLEESKQLKKLRKVEDGIKKKIDKLEKE 104
K+ EG K E + + + + I V ++ N +E+ + K KV +G+K+K+ + +KE
Sbjct: 671 KVGLEGNKDEEADGEELFDVLKAIGSVVVQLGNAQEALEGKAESKVIEGVKQKLGEAKKE 730
Query: 105 NDKKLK----------KKLEEARK 118
+K + K+LEEA+K
Sbjct: 731 LEKAKEAVESEVGMDGKELEEAKK 754
>M.Javanica_Scaff1078g012580 on XP_001608785 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 954
Score = 27.7 bits (60), Expect = 0.76, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 18/74 (24%)
Query: 44 MEKIETEGYKKLEKKLKYWQLKEEIDEVENRISNLEESKQLKKLRKVEDGIKKKIDKLEK 103
+EK+ EG K EK K E+D +N +S + +RKV D +KK ++ L+
Sbjct: 747 LEKLLNEGLGKAEKDGK------EVDPGKNAVS-----AAIHDIRKVVDALKKGVEALK- 794
Query: 104 ENDKKLKKKLEEAR 117
K++E+A+
Sbjct: 795 ------SKEVEDAK 802
>M.Javanica_Scaff1078g012580 on XP_001611897 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1369
Score = 27.3 bits (59), Expect = 1.2, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 41 EEEMEKIETEGYKKLEKKLKYWQLKEEIDEVENRISNLEESKQLKKLRKVEDGIKKKIDK 100
E E++++ L LK L E+I EV ++ N +E + K K +G+K + K
Sbjct: 671 ENELKRLYYGTSGTLSGSLK--TLLEKIGEVVVQLGNAQEVLEKKAENKAIEGVKVALGK 728
Query: 101 LEKENDKKLKKKLEEARK 118
+KE +K + LE+A K
Sbjct: 729 AKKELEKA-RTGLEKAVK 745
>M.Javanica_Scaff1078g012580 on XP_001609751 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1298
Score = 27.3 bits (59), Expect = 1.3, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Query: 12 ALILVWNLNVGAAQDNFDEEEELQKDKNDEEEMEKIETEGYKKLEKKLKYWQLKEEIDEV 71
AL + N G+ E E QKD + ++ +G K+ + K W ++E D +
Sbjct: 707 ALHTLVNSGPGSLHQVSSSEHEWQKDYSSAKDRISAAIDGLHKVLEIFKKWAEQDETDII 766
Query: 72 ENRISNLEESKQLKKLRKVEDGIKKKIDKLE 102
+ S LE L K+ V + + KLE
Sbjct: 767 KQAKSALE---HLGKITGVGNEVNLSNVKLE 794
>M.Javanica_Scaff1078g012580 on XP_001611442 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1350
Score = 25.8 bits (55), Expect = 3.1, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 59 LKYWQLKEEIDEVENRISNLEESKQLKKLRKVEDGIKKKIDKLEKENDKKLKKK 112
L+ ++ KEE E+ ++E++K+ K+ + D +KK I+ EK+ + K+
Sbjct: 1217 LEGYEQKEE----EDLQFDIEDTKKAKQCHEFLDSLKKVIENAEKDKQDQATKE 1266
>M.Javanica_Scaff1078g012580 on XP_001609034 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1313
Score = 25.8 bits (55), Expect = 3.2, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 87 LRKVEDGIKKKIDKLEKENDKKLKKKLEEARKEGKIFWEDKLENLQIENNK 137
LR+V D + +K+ +LEK +K + +A + K E E ++ + NK
Sbjct: 717 LREVLDKVNEKVKELEKVVTEKADGETSQALSKAKTALERAKEMVKNDGNK 767
>M.Javanica_Scaff1078g012580 on XP_001610567 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1315
Score = 25.0 bits (53), Expect = 5.4, Method: Composition-based stats.
Identities = 39/183 (21%), Positives = 68/183 (37%), Gaps = 42/183 (22%)
Query: 34 LQKDKNDEEEMEKIETEGYKKLEKKLKYWQLKEEIDEVENRISNLEESKQLKKLRKVEDG 93
++ D+ E ET G E LK ++ + I V ++ N +E+ + KK +E G
Sbjct: 648 MEHDRKGRVEKVMRETLGKVNEEVALKVKEVLQAIGNVVVQLGNAQEALEGKKKEAIE-G 706
Query: 94 IKKKIDKLEKENDK-----------------------KLKKKLEEARKEGKIFWEDKLEN 130
+K K+ + ++ DK K K KL+ K G + ++
Sbjct: 707 VKAKLQEAKEGLDKARTALEEAAKKVNGDGLSGNELTKAKTKLDALAKNGGGKLGEVVQK 766
Query: 131 LQIENNKLIDEGLLNIEEERKELMRKYDDFIVELKEE--------------WFRALIYHV 176
L + D+G + E ++ D + LKEE W R L +
Sbjct: 767 LGKATSDDFDQG----KNELSNAIKGVRDALEALKEELKDDKSPLYGKLPDWVRELFHKA 822
Query: 177 FDE 179
D+
Sbjct: 823 IDK 825
>M.Javanica_Scaff1078g012580 on XP_965997 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2879
Score = 24.6 bits (52), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 11/69 (15%)
Query: 80 ESKQLKKLRKVEDGIKKKIDKLEK------ENDKKLKKKLEEARKEGKIFWEDKLENLQI 133
+S++ KKL+ G KKK+D K + DK+ K+ E K W+ + E +
Sbjct: 1016 QSQEYKKLQDACTGCKKKVDSCTKGTPDCEQCDKQCKQYTEFITK-----WQPQWETMSY 1070
Query: 134 ENNKLIDEG 142
+ L +E
Sbjct: 1071 KYQTLYEEA 1079
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff112g002092
(126 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_820181 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.98
XP_001350415 PfEMP1 (Establishment) [Plasmodium falciparum] 25 1.2
XP_818092 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.2
XP_805084 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.0
XP_818396 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.7
XP_808883 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.1
XP_809010 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 7.1
XP_811362 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 8.7
>M.Javanica_Scaff112g002092 on XP_820181 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 648
Score = 25.8 bits (55), Expect = 0.98, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 79 SSRQPKHPQRFTVYSSEDSGNHWLF 103
S+R K+ F + S D GN+W+F
Sbjct: 242 SARNGKNQPFFMINYSTDKGNNWVF 266
>M.Javanica_Scaff112g002092 on XP_001350415 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3056
Score = 25.4 bits (54), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 6/46 (13%)
Query: 24 EQTITPNYLYVLDNYKIYVDQRMEQIFSENNAQTIP-----EDWFE 64
E I N L V D Y Y+D ++ +IF +N I DW+E
Sbjct: 1681 EDIIKGNDL-VHDEYTKYIDSKLNEIFDSSNKNDIETKRARTDWWE 1725
>M.Javanica_Scaff112g002092 on XP_818092 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 884
Score = 24.6 bits (52), Expect = 2.2, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 4/42 (9%)
Query: 60 EDWFEFPPKGRRQRKSRGESSRQPKHPQRFTVYSSEDSGNHW 101
E FP +G+++ K + +YSSED+ +W
Sbjct: 253 EGMLVFPVEGKKKEKGGSNDGKTVS----LLIYSSEDTNKNW 290
>M.Javanica_Scaff112g002092 on XP_805084 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 828
Score = 23.9 bits (50), Expect = 4.0, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Query: 79 SSRQPKHPQRFTVYSSEDSGNHWLFKTCKCIL--CM 112
S + K + TV SED G+ W F I CM
Sbjct: 241 SEKAEKRERTCTVIYSEDDGDTWTFPDAAAIANDCM 276
>M.Javanica_Scaff112g002092 on XP_818396 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1044
Score = 23.5 bits (49), Expect = 4.7, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 79 SSRQPKHPQRFTVYSSEDSGNHWLFKTCKCI 109
S + K + TV SED G+ W F I
Sbjct: 241 SEKAEKEERTCTVIYSEDDGDTWTFPDAAAI 271
>M.Javanica_Scaff112g002092 on XP_808883 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 446
Score = 23.5 bits (49), Expect = 5.1, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Query: 79 SSRQPKHPQRFTVYSSEDSGNHWLFKTCKCIL--CM 112
S + K + TV SED G+ W F I CM
Sbjct: 241 SEKAGKEERTCTVIYSEDDGDTWTFPDAAAIANDCM 276
>M.Javanica_Scaff112g002092 on XP_809010 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 774
Score = 23.1 bits (48), Expect = 7.1, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 23/52 (44%)
Query: 60 EDWFEFPPKGRRQRKSRGESSRQPKHPQRFTVYSSEDSGNHWLFKTCKCILC 111
+D FP + ++ + E ++ + +YSS+D+ N L K C
Sbjct: 270 DDTLVFPLEAVKEDGTESEEEKRKNNNVSLILYSSKDTKNWTLSKGMSAYGC 321
>M.Javanica_Scaff112g002092 on XP_811362 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 524
Score = 22.7 bits (47), Expect = 8.7, Method: Composition-based stats.
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 60 EDWFEFPPKGRRQRKSRGESSRQPKHPQRFTVYSSEDSGNHWLFK 104
+D FP + ++ + E ++ + +YSS+D+ N L K
Sbjct: 270 DDTLVFPLEAVKEDGTESEEEKRKNNNVSLILYSSKDTKNWTLSK 314
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]