BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4061g032667
(311 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_827741 VSG (Establishment) [Trypanosoma brucei] 27 1.8
XP_001609936 variant erythrocyte surface antigen-1, beta subuni... 27 2.3
XP_001610497 variant erythrocyte surface antigen-1, alpha subun... 26 4.2
XP_001350935 PfEMP1 (Establishment) [Plasmodium falciparum] 25 6.3
>M.Javanica_Scaff4061g032667 on XP_827741 VSG (Establishment) [Trypanosoma brucei]
Length = 514
Score = 26.9 bits (58), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 15/25 (60%)
Query: 248 AIDKAKGKLRSELYKAENFKNENLA 272
A +K KGKL E KA FK EN A
Sbjct: 456 ATEKCKGKLEPECTKAPEFKWENSA 480
>M.Javanica_Scaff4061g032667 on XP_001609936 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1133
Score = 26.6 bits (57), Expect = 2.3, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Query: 118 KGSTSPTNPAQESSSSLSIPSKKAKIESIEQALAELEKLVFKDEDEKSVNRLSNNVYKLV 177
KG TSP PA++ + +S K +I + L L L + + V+R+ Y
Sbjct: 372 KGITSPAKPAEKKDTPVS-----RKPRTIREILYWLSALPYSQGYKALVDRMKEK-YPRK 425
Query: 178 LNSREKLDEKI 188
N E+ +E+I
Sbjct: 426 ENKPEEFEEQI 436
>M.Javanica_Scaff4061g032667 on XP_001610497 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1315
Score = 25.8 bits (55), Expect = 4.2, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Query: 208 KKEIENGAKNIVDRIGVGLTFIRKNKDLMGFNEKDAQIVAAIDKAKGKLRSELYKAENFK 267
KKE G K ++ + L + ++L N KD Q AI KAK L +
Sbjct: 691 KKEAIEGVKTVLGKAKGELD--KAKQELEQVNGKDGQTSQAISKAKKALEALTNGGSGAL 748
Query: 268 NENLAEEIIQDEDADGFKKKYTKRFKEILDVAKA 301
+ +++ + + + + +KK Y+ +I KA
Sbjct: 749 HTLVSDGLEKAANGEEWKKDYSSAKDKISAAIKA 782
>M.Javanica_Scaff4061g032667 on XP_001350935 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2268
Score = 25.4 bits (54), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 249 IDKAKGKLRSELYKAENFKNENLAEEIIQDEDADGFKKKYTKRFKEILDVAKAGIF 304
+DK K K +SE+ + + K+ + + D +G++ K+ K KE + G F
Sbjct: 393 LDKQKKKYKSEITRGASGKSPKRTKRGARASDDNGYESKFYKILKEKNNYGTVGEF 448
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4626g035541
(164 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_652967 Vps35 (Establishment) [Entamoeba histolytica] 26 1.5
XP_001349035 PfEMP1 (Establishment) [Plasmodium falciparum] 24 4.4
XP_001351513 PfEMP1 (Establishment) [Plasmodium falciparum] 24 7.0
XP_001351514 PfEMP1 (Establishment) [Plasmodium falciparum] 23 7.6
XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum] 23 8.2
>M.Javanica_Scaff4626g035541 on XP_652967 Vps35 (Establishment) [Entamoeba histolytica]
Length = 757
Score = 25.8 bits (55), Expect = 1.5, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 6/82 (7%)
Query: 55 EMLPRTPELIFVNLTTLEGQPHCLELTSKGWRVTSLRTDCMHGDFTKMEMFTNYYNSFNE 114
EM+ + L N + +E + HC++ +K R R + MF NYY F
Sbjct: 645 EMMCKIASLDIKNNSNVEDKEHCIDTLNKA-RKEIERIIDEEEKKKVLIMFVNYYIYFFP 703
Query: 115 LMNFISPK-----YQNLKENEE 131
L++ I+ +KEN+E
Sbjct: 704 LLDQITADQITQIITEIKENKE 725
>M.Javanica_Scaff4626g035541 on XP_001349035 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2239
Score = 24.3 bits (51), Expect = 4.4, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 31/64 (48%)
Query: 94 CMHGDFTKMEMFTNYYNSFNELMNFISPKYQNLKENEEGEYINNTFHHTSTECSSNSISD 153
C +G+ K + + +Y+ ++ N I +N+E E N+ F H E +SI
Sbjct: 531 CRNGEKIKKDDWKCHYDDNDKSDNCILQNDNKNTKNQEIESFNSLFWHWINEMLKDSILW 590
Query: 154 SEEL 157
S+EL
Sbjct: 591 SKEL 594
>M.Javanica_Scaff4626g035541 on XP_001351513 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2152
Score = 23.9 bits (50), Expect = 7.0, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 109 YNSFNELMNFISPKY--QNLKENEEGEYINNTFHHTSTECSSNS 150
Y S E ++ +S + +N KE EEG+ T +S + S +S
Sbjct: 451 YESVGEFLDLLSKEEVCKNFKEKEEGKIDFKTVKSSSAKNSDDS 494
>M.Javanica_Scaff4626g035541 on XP_001351514 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2201
Score = 23.5 bits (49), Expect = 7.6, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 109 YNSFNELMNFISPKY--QNLKENEEGEYINNTFHHTSTECSSNS 150
Y S E ++ +S + +N KE EEG+ T +S + S +S
Sbjct: 451 YESVGEFLDLLSKEEVCKNFKEKEEGKIDFKTVKSSSAKNSDDS 494
>M.Javanica_Scaff4626g035541 on XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3119
Score = 23.5 bits (49), Expect = 8.2, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 128 ENEEGEYINNTFHHTSTECSSN 149
ENE I+NT H + EC+ N
Sbjct: 590 ENELNNCIDNTSTHCNKECNKN 611
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7264g047384
(224 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350798 PfEMP1 (Establishment) [Plasmodium falciparum] 25 3.5
XP_001349438 PfEMP1 (Establishment) [Plasmodium falciparum] 25 5.1
>M.Javanica_Scaff7264g047384 on XP_001350798 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2359
Score = 25.4 bits (54), Expect = 3.5, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 7/46 (15%)
Query: 184 NIIQRYLDNNVQPLPIDHHYFNPQPII------EFLTGISSNYHMN 223
NI++ +DNN P P H + +P I L G NY M+
Sbjct: 2067 NILRDNVDNNTHPTP-SRHTLDQKPFIMSIHDRNLLNGEEYNYDMS 2111
>M.Javanica_Scaff7264g047384 on XP_001349438 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2265
Score = 25.0 bits (53), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 9/49 (18%)
Query: 184 NIIQRYLDNNVQPLPIDHHYFNPQPII------EFLTG--ISSNYHMNA 224
NI+ LDNN P P H + +P I + +G IS N HM+
Sbjct: 1948 NILHDNLDNNTHPTP-SRHTLDQKPFIMSIHDRDLYSGEEISYNIHMST 1995
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6355g043565
(76 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff495g006905
(70 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_652394 Igl2 (Adhesin) [Entamoeba histolytica] 24 0.90
XP_654447 Igl1 (Adhesin) [Entamoeba histolytica] 24 0.96
XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum] 22 7.6
>M.Javanica_Scaff495g006905 on XP_652394 Igl2 (Adhesin) [Entamoeba histolytica]
Length = 1105
Score = 23.9 bits (50), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 9/18 (50%), Positives = 14/18 (77%)
Query: 10 ILLFLVSLSMGDHCSDIL 27
ILL +S+S+GD+ +D L
Sbjct: 3 ILLLFISISLGDYTADKL 20
>M.Javanica_Scaff495g006905 on XP_654447 Igl1 (Adhesin) [Entamoeba histolytica]
Length = 1101
Score = 23.9 bits (50), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 9/18 (50%), Positives = 14/18 (77%)
Query: 10 ILLFLVSLSMGDHCSDIL 27
ILL +S+S+GD+ +D L
Sbjct: 3 ILLLFISISLGDYTADKL 20
>M.Javanica_Scaff495g006905 on XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3119
Score = 21.6 bits (44), Expect = 7.6, Method: Composition-based stats.
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 15 VSLSMGDHCSDILKLDCEKYCHDTCTKASGDKVVCNLVKSICDNI 59
++ + + C+D + Y C +GD C +VK+ +NI
Sbjct: 519 ITKRLSEFCTDSSNNKGKNYEQWKCYYKNGDDNKCKMVKNSGNNI 563
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4273g033729
(422 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3246g028032
(91 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351513 PfEMP1 (Establishment) [Plasmodium falciparum] 23 2.3
>M.Javanica_Scaff3246g028032 on XP_001351513 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2152
Score = 23.5 bits (49), Expect = 2.3, Method: Composition-based stats.
Identities = 8/28 (28%), Positives = 18/28 (64%)
Query: 42 FEKYVKMVSPNKKCRTHQAESNDTKINE 69
F+K+++ + K C+ + ++N+T NE
Sbjct: 1289 FKKFLESFNQRKVCQGNSDQTNNTDFNE 1316
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4033g032514
(205 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff25518g091026
(96 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_804241 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.9
XP_809960 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.1
>M.Javanica_Scaff25518g091026 on XP_804241 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 765
Score = 23.5 bits (49), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 15/19 (78%)
Query: 48 LVEGVKTNGYNFVKSSLIS 66
LVEGV T+ + V+S+LIS
Sbjct: 241 LVEGVATHSKDGVQSTLIS 259
>M.Javanica_Scaff25518g091026 on XP_809960 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 890
Score = 23.5 bits (49), Expect = 3.1, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 12/23 (52%)
Query: 20 ATVAKRRPSFRSTCPTSSAAAKT 42
AT K S CPTSSAA T
Sbjct: 469 ATWKKVDESVSKLCPTSSAAEST 491
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff759g009629
(59 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
PFE0340c ROM4 (Invasion) [Plasmodium falciparum] 27 0.053
>M.Javanica_Scaff759g009629 on PFE0340c ROM4 (Invasion) [Plasmodium falciparum]
Length = 759
Score = 26.9 bits (58), Expect = 0.053, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 6/53 (11%)
Query: 10 IYFVLNLINCQNIREHAAELRA-----VKGQFFHILFNVDC-IEVAHKYVPDF 56
+Y +L +N IR + R + G F HILFNV C I++ PD+
Sbjct: 441 VYNLLGGLNTNYIRNYGELYRLFWSMYLHGGFMHILFNVICQIQILWMIEPDW 493
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff357g005290
(91 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_816570 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.97
XP_965997 PfEMP1 (Establishment) [Plasmodium falciparum] 22 9.2
>M.Javanica_Scaff357g005290 on XP_816570 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 718
Score = 24.6 bits (52), Expect = 0.97, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 17/38 (44%)
Query: 1 MLFLSKFFQKTTKIAFTFYLLATFSNAFCPPGCECNDD 38
ML+ K F + A YL T +N CP G DD
Sbjct: 387 MLYTQKGFPQGEDKANALYLWVTDNNRTCPVGPISMDD 424
>M.Javanica_Scaff357g005290 on XP_965997 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2879
Score = 21.9 bits (45), Expect = 9.2, Method: Composition-based stats.
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 34 ECNDDLLTVFCDFSGINAVPILLN 57
EC +D ++C +G N ++ N
Sbjct: 310 ECQNDSKKLYCSLNGYNCTRLIPN 333
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff809g010141
(107 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350413 PfEMP1 (Establishment) [Plasmodium falciparum] 27 0.27
>M.Javanica_Scaff809g010141 on XP_001350413 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2860
Score = 26.9 bits (58), Expect = 0.27, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 11/83 (13%)
Query: 27 VAEPSSSTTENTLPGQQQGDIVMELNIRGPPGGRTGRNVGRTQTGQQGLQQQQERREGDH 86
V EPS T+N +P Q DI + G P + N T + Q Q + D+
Sbjct: 2551 VLEPSKRDTQNDIPNDIQNDIQSD----GIPSSKITDNEWNTLKDEFISQYLQSEQPNDY 2606
Query: 87 ANTTV-------TIQHIRPRREP 102
N + T+ +P +P
Sbjct: 2607 KNGNIPLNTQPNTLYFDKPEEKP 2629
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4429g034568
(87 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_845143 VSG (Establishment) [Trypanosoma brucei] 26 0.30
XP_803373 VSG (Establishment) [Trypanosoma brucei] 25 0.55
XP_001349514 PfEMP1 (Establishment) [Plasmodium falciparum] 23 2.8
ABR92024 MSA-1 (Invasion) [Babesia bovis] 23 4.5
XP_846884 VSG (Establishment) [Trypanosoma brucei] 22 7.5
XP_001350936 PfEMP1 (Establishment) [Plasmodium falciparum] 22 7.5
XP_846274 VSG (Establishment) [Trypanosoma brucei] 22 8.9
>M.Javanica_Scaff4429g034568 on XP_845143 VSG (Establishment) [Trypanosoma brucei]
Length = 501
Score = 25.8 bits (55), Expect = 0.30, Method: Composition-based stats.
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 59 RSFNFNGCNGNCNNFLSQQTCEFACK 84
++ N +G CN S TC+ CK
Sbjct: 411 KTVNMEISDGECNKLTSNNTCKSPCK 436
>M.Javanica_Scaff4429g034568 on XP_803373 VSG (Establishment) [Trypanosoma brucei]
Length = 499
Score = 25.4 bits (54), Expect = 0.55, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 7/47 (14%)
Query: 33 SQVGTLCGNSRRSVTRWAFVARENACRSFNFNGCNGNCNNFLSQQTC 79
SQV ++ GN AF N R NG NCN S TC
Sbjct: 259 SQVESVLGNK-------AFTGHTNNGRYVLGNGAAANCNGGDSSATC 298
>M.Javanica_Scaff4429g034568 on XP_001349514 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2120
Score = 23.1 bits (48), Expect = 2.8, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 56 NACRSFNFNGCNGNCNNFL 74
N C+ N NG NG+ N L
Sbjct: 1379 NVCKPKNVNGQNGDGNQIL 1397
>M.Javanica_Scaff4429g034568 on ABR92024 MSA-1 (Invasion) [Babesia bovis]
Length = 330
Score = 22.7 bits (47), Expect = 4.5, Method: Composition-based stats.
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 62 NFNGCNGNCNNFLSQQT 78
N NG G C FL+Q++
Sbjct: 175 NVNGMAGVCKGFLNQES 191
>M.Javanica_Scaff4429g034568 on XP_846884 VSG (Establishment) [Trypanosoma brucei]
Length = 493
Score = 21.9 bits (45), Expect = 7.5, Method: Composition-based stats.
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 54 RENACRSFNFNGCNGNC 70
+EN C + N + C G+C
Sbjct: 403 KENECSNKNGDKCKGDC 419
>M.Javanica_Scaff4429g034568 on XP_001350936 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2163
Score = 21.9 bits (45), Expect = 7.5, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 60 SFNFNGCNGNCNNFLSQQTCEFACK 84
S + +GNC N + TC+ +CK
Sbjct: 614 SMQWRNEHGNCINKDNDNTCKNSCK 638
>M.Javanica_Scaff4429g034568 on XP_846274 VSG (Establishment) [Trypanosoma brucei]
Length = 547
Score = 21.9 bits (45), Expect = 8.9, Method: Composition-based stats.
Identities = 11/47 (23%), Positives = 23/47 (48%)
Query: 40 GNSRRSVTRWAFVARENACRSFNFNGCNGNCNNFLSQQTCEFACKGR 86
G + ++ + A E A + +G +C+ +Q+ CE A +G+
Sbjct: 440 GKKKCTLDKEAKQTAEGAAKQEGKDGKTVDCSKLYTQEKCEKANEGQ 486
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5369g039146
(55 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349207 EBA-175 (Adhesin) [Plasmodium falciparum] 21 5.9
>M.Javanica_Scaff5369g039146 on XP_001349207 EBA-175 (Adhesin) [Plasmodium falciparum]
Length = 1462
Score = 21.2 bits (43), Expect = 5.9, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 10 LSSTPGETLSTAAHRELRVNKNVYK 34
+S+TPG +T+ R++ N YK
Sbjct: 1070 MSNTPGPLDNTSEETTERISNNEYK 1094
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5650g040402
(149 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_966151 TLP (Invasion) [Plasmodium falciparum] 24 5.7
XP_001352170 MSP1 (Invasion) [Plasmodium falciparum] 24 6.2
>M.Javanica_Scaff5650g040402 on XP_966151 TLP (Invasion) [Plasmodium falciparum]
Length = 1371
Score = 23.9 bits (50), Expect = 5.7, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 7 HNNTPMQINQEMSLETFTQEQQINLIQKEENNVVKTEGVEIQ 48
HNN N E +++ I+++ KEE+N+ E+Q
Sbjct: 1036 HNNNYYMTN-EHDERKIKKQENIDILSKEEDNISSNYNNELQ 1076
>M.Javanica_Scaff5650g040402 on XP_001352170 MSP1 (Invasion) [Plasmodium falciparum]
Length = 1720
Score = 23.9 bits (50), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 9/30 (30%), Positives = 19/30 (63%)
Query: 30 NLIQKEENNVVKTEGVEIQYGITNSIPTIF 59
NL +EEN + + +++ + I N+IP ++
Sbjct: 833 NLTPEEENELKSCDPLDLLFNIQNNIPAMY 862
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff8098g050686
(97 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_805061 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.7
>M.Javanica_Scaff8098g050686 on XP_805061 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 920
Score = 22.7 bits (47), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 20/44 (45%)
Query: 41 PYPPSLAHIRPGHQPFAEDNFASNQNNFAYRSFDSHPSGVVAGN 84
PY SL + H + N +++ +A R D+H S V N
Sbjct: 793 PYGTSLDVLEGVHDEPSNANTLASEEQYADRDEDTHVSESVGTN 836
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4335g034066
(365 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_810068 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.18
XP_819381 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.34
XP_812720 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.37
XP_001351319 PfEMP1 (Establishment) [Plasmodium falciparum] 27 2.0
XP_805548 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 7.0
XP_806299 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 7.1
XP_804512 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 7.3
>M.Javanica_Scaff4335g034066 on XP_810068 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1147
Score = 30.4 bits (67), Expect = 0.18, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 10/76 (13%)
Query: 23 SFETTTTTTTTTSTTIISTQTTPKTTSQPKQS--TLPSSTTTSTQLLLKVGILGANSSEL 80
SFE T +T TTP T P +S T+PS T++LL+ G LG EL
Sbjct: 1063 SFEDGKEAPQPVDTAPGNTSTTPGETKIPSESNATIPS----DTEILLEHGHLG----EL 1114
Query: 81 RSAYGFGQSVPAISIA 96
+ Y G S + ++
Sbjct: 1115 AAMYLIGDSTVQVCVS 1130
>M.Javanica_Scaff4335g034066 on XP_819381 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1046
Score = 29.6 bits (65), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Query: 23 SFETTTTTTTTTSTTIISTQTTPKTTSQPKQSTLPSSTTTSTQLLLKVGILGANSSELRS 82
SFE T T +T TTP T P +S ++T + T +LL+ G LG EL +
Sbjct: 962 SFEDGKEAPQTVDTKPENTNTTPGETKIPSESN--ATTPSDTDILLEKGHLG----ELAA 1015
Query: 83 AYGFGQS 89
Y G S
Sbjct: 1016 MYLIGDS 1022
>M.Javanica_Scaff4335g034066 on XP_812720 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1041
Score = 29.3 bits (64), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Query: 23 SFETTTTTTTTTSTTIISTQTTPKTTSQPKQSTLPSSTTTSTQLLLKVGILGANSSELRS 82
SFE T T +T TTP T P +S ++T + T +LL+ G LG EL +
Sbjct: 957 SFEDGKEAPKTVDTAQGNTNTTPGETKIPSESN--ATTPSDTDILLEKGHLG----ELAA 1010
Query: 83 AYGFGQS 89
Y G S
Sbjct: 1011 MYLIGDS 1017
>M.Javanica_Scaff4335g034066 on XP_001351319 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2646
Score = 26.9 bits (58), Expect = 2.0, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 21 NNSFETTTTTTTTTSTTIISTQTTPKTTSQPKQST-LPSSTTTSTQ 65
NN+ + TT + + T S + TP T QS +PSS T +
Sbjct: 2299 NNTTASGNNTTASGNNTTASGKNTPSDTQNDIQSDGIPSSKITDNE 2344
>M.Javanica_Scaff4335g034066 on XP_805548 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1044
Score = 25.4 bits (54), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 8/55 (14%)
Query: 46 KTTSQPKQSTLPS----STTTSTQLLLKVGILGANSSELRSAYGFGQSVPAISIA 96
KT++ P ++ +PS +T + T++LL G LG EL + Y G S + ++
Sbjct: 977 KTSTAPGETEIPSESNATTPSDTEILLDNGHLG----ELAAMYLIGDSTVQVCVS 1027
>M.Javanica_Scaff4335g034066 on XP_806299 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1047
Score = 25.4 bits (54), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 31 TTTTSTTIISTQTTPKT--TSQPKQSTLPSSTTTSTQLLLKVGILGANSSELRSAYGFGQ 88
T S+T +S + P++ ++ + T + ++ +L A+SS+ + G
Sbjct: 727 TEQVSSTDVSIASEPRSEESTASHEELTEDDTDEQEEGIVNDLLLAASSSKADA----GS 782
Query: 89 SVPAISIALQRARNEHLIDFVNF 111
SVP + A Q A N H D F
Sbjct: 783 SVPESATAAQSAENSHQEDNAQF 805
>M.Javanica_Scaff4335g034066 on XP_804512 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 310
Score = 25.0 bits (53), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 6/53 (11%)
Query: 225 ENMRSTLLQLGN------RSRIVIANIDNIATRRDFLLAITDTGISQSNEFVF 271
+ MR T + G+ R++ V ++D +A RD+ L + +S NE +
Sbjct: 160 DTMRPTTVVAGDSVYMLLRNQSVTPSVDKLANARDWGLLLVKGSVSGGNEITW 212
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6584g044588
(258 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff29244g096109
(88 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum] 23 4.0
>M.Javanica_Scaff29244g096109 on XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2858
Score = 22.7 bits (47), Expect = 4.0, Method: Composition-based stats.
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 38 SKHNDQAFHGDQSAFEE 54
S+H + AFH D ++EE
Sbjct: 2049 SRHLNYAFHTDPPSYEE 2065
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4458g034702
(276 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_805751 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 3.3
>M.Javanica_Scaff4458g034702 on XP_805751 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 784
Score = 25.8 bits (55), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 139 LQQRHHKVQGIPSLKSLFVPESSKNSINNSSYSSREGLNLTPQMHLISTNCER 191
L ++ H VQG S + E ++ YS EG T ++HL T+ +R
Sbjct: 315 LARKGHGVQG--GFVSATIDEQKYILVSRPVYSGEEGKQETGRLHLWLTDMQR 365
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4345g034110
(130 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_814930 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.2
>M.Javanica_Scaff4345g034110 on XP_814930 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 938
Score = 23.9 bits (50), Expect = 4.2, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 53 FVLVMNVKNKSRIDDYIYK 71
F+LV + + + IDDYI+K
Sbjct: 260 FLLVGSYEERREIDDYIWK 278
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7367g047799
(384 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff28311g094901
(75 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_806744 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.8
XP_804223 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.0
XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum] 22 7.9
>M.Javanica_Scaff28311g094901 on XP_806744 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 789
Score = 22.7 bits (47), Expect = 2.8, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Query: 4 NDHEANGNLATFFGLHYWNDDMLQRLFHLFTSCRSYKSNPSMELER 49
ND A G T + +NDD+ H + S + PS+ E+
Sbjct: 421 NDQSATGGHVTVTNVMLYNDDLYNNELHKLKA--SKVTVPSLGAEK 464
>M.Javanica_Scaff28311g094901 on XP_804223 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 746
Score = 22.7 bits (47), Expect = 3.0, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Query: 4 NDHEANGNLATFFGLHYWNDDMLQRLFHLFTSCRSYKSNPSMELER 49
ND A G T + +NDD+ H + S + PS+ E+
Sbjct: 378 NDQSATGGHVTVTNVMLYNDDLYNNELHKLKA--SKVTVPSLGAEK 421
>M.Javanica_Scaff28311g094901 on XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3119
Score = 21.6 bits (44), Expect = 7.9, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 25 MLQRLFHLFTSCRSYKSNPSMELERSRLTN 54
+L L T C+ +N + E R+R TN
Sbjct: 699 LLDHLKETATICKDNNTNEACETSRNRKTN 728
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6812g045547
(149 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_806427 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.6
XP_820143 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.7
XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum] 24 4.1
XP_805179 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.0
XP_812314 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.2
>M.Javanica_Scaff6812g045547 on XP_806427 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 886
Score = 25.4 bits (54), Expect = 1.6, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Query: 101 IDCFYQRKCTPVSA---SSTNKKYRSIGIIAGFSGVNKGNFGEN 141
+D + CT +SA +ST ++ I G G GNF EN
Sbjct: 471 VDERVSKLCTSLSALEGTSTENACSTVDITDGLVGFLSGNFSEN 514
>M.Javanica_Scaff6812g045547 on XP_820143 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 869
Score = 24.6 bits (52), Expect = 2.7, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 61 DVASTKLFKNSSDCEMMYSECSTAEEKSCKAGMCE 95
DV+ SD M+ +C + E + AG CE
Sbjct: 160 DVSRPTTVLKGSDIYMLVGQCGSKESPNSGAGGCE 194
>M.Javanica_Scaff6812g045547 on XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum]
Length = 3130
Score = 24.3 bits (51), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 42 YIDLQTCKHSLISSQTCPSDVASTKLFKNSSDCEMMYSECSTAEEKSCKAGMCECFKSMI 101
Y+D+ TCK +++ + + D+ + + K + D E E EE+ C G F +++
Sbjct: 170 YLDIYTCKEAILFTTSFYKDLDKSSITKINEDIEKFNEEIIKNEEQ-CLVGGKTDFDNLL 228
>M.Javanica_Scaff6812g045547 on XP_805179 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 793
Score = 23.9 bits (50), Expect = 5.0, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Query: 101 IDCFYQRKCTPVSASS---TNKKYRSIGIIAGFSGVNKGNFGEN 141
+D + C P SA+ T+ + I AG G GNF EN
Sbjct: 482 VDKRVSKLCPPSSANEGRLTDSACSAGKITAGLVGFLSGNFSEN 525
>M.Javanica_Scaff6812g045547 on XP_812314 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 923
Score = 23.9 bits (50), Expect = 5.2, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Query: 101 IDCFYQRKCTPVSAS---STNKKYRSIGIIAGFSGVNKGNFGEN 141
+D + CT + A ST+ ++ I AG G GNF EN
Sbjct: 472 VDGRVSQLCTSLIAEKDLSTDDVCSAVKITAGLVGFLSGNFSEN 515
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff31326g098556
(75 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAA87406 AP65-1 (Adhesin) [Trichomonas vaginalis] 24 0.77
XP_001351876 PfEMP1 (Establishment) [Plasmodium falciparum] 22 4.5
XP_001349738 PfEMP1 (Establishment) [Plasmodium falciparum] 22 5.8
XP_001609935 variant erythrocyte surface antigen-1, alpha subun... 22 5.9
XP_001610197 variant erythrocyte surface antigen-1, beta subuni... 22 9.3
XP_001351080 PfEMP1 (Establishment) [Plasmodium falciparum] 21 9.7
>M.Javanica_Scaff31326g098556 on AAA87406 AP65-1 (Adhesin) [Trichomonas vaginalis]
Length = 255
Score = 24.3 bits (51), Expect = 0.77, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 15 FNNQGIDPYKGLVADEEQLAQEKEYRI---ELMKKLGIGNDSKMKKKS 59
FN +G+ PYK DE+ +++ + L+K + + N+ + +S
Sbjct: 47 FNLRGLLPYKVFTKDEQAARIRRQFELMPTPLLKYIFLANEREKNSQS 94
>M.Javanica_Scaff31326g098556 on XP_001351876 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3164
Score = 22.3 bits (46), Expect = 4.5, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 24/50 (48%)
Query: 20 IDPYKGLVADEEQLAQEKEYRIELMKKLGIGNDSKMKKKSVKEETKGISI 69
++ KG++ + LA KEY + + + + K + + +E K I +
Sbjct: 1535 VNDSKGIIVKDYVLANAKEYLKKKFTAICVTSSGKAQNSATEEVKKNIEL 1584
>M.Javanica_Scaff31326g098556 on XP_001349738 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2162
Score = 21.9 bits (45), Expect = 5.8, Method: Composition-based stats.
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 17 NQGIDPYKGLVADE 30
N G+DP+ G V DE
Sbjct: 999 NAGLDPFGGSVDDE 1012
>M.Javanica_Scaff31326g098556 on XP_001609935 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1317
Score = 21.9 bits (45), Expect = 5.9, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 23/60 (38%), Gaps = 11/60 (18%)
Query: 19 GIDPYKGLVADEEQLAQEKEYRIELMKKLG-----------IGNDSKMKKKSVKEETKGI 67
G+D G DEE+L + K +EL G +G D K V + G+
Sbjct: 740 GLDRVNGNGLDEEKLKEAKAKLVELTNGSGRNGILGEVCNKLGGDVDPAKNEVSKAINGV 799
>M.Javanica_Scaff31326g098556 on XP_001610197 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1123
Score = 21.6 bits (44), Expect = 9.3, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 48 GIGNDSKMKKKSVKEETKGI 67
G GND K+ + EET G+
Sbjct: 261 GSGNDRWSKEGKLHEETNGL 280
>M.Javanica_Scaff31326g098556 on XP_001351080 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2209
Score = 21.2 bits (43), Expect = 9.7, Method: Composition-based stats.
Identities = 12/45 (26%), Positives = 20/45 (44%)
Query: 29 DEEQLAQEKEYRIELMKKLGIGNDSKMKKKSVKEETKGISIARIV 73
+EE+ + +E K+ D K ++K KEE + IV
Sbjct: 799 EEEKAKDNTDETVETAKETKEDTDRKGEEKQPKEEVDNVKPCEIV 843
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5495g039712
(72 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_965999 PfEMP1 (Establishment) [Plasmodium falciparum] 23 1.9
XP_811678 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.0
XP_820141 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.2
XP_809607 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.2
XP_805336 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 6.2
XP_811677 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 7.6
XP_812793 Trans-sialidase (Invasion) [Trypanosoma cruzi] 21 9.5
>M.Javanica_Scaff5495g039712 on XP_965999 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1325
Score = 23.1 bits (48), Expect = 1.9, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 23 FDPAAEA-TNNDRVTVEWTNTPEGAAKQFRRE 53
FD AEA N+D++ N+ GA FRR+
Sbjct: 106 FDENAEAYCNSDKIRGNENNSNAGACAPFRRQ 137
>M.Javanica_Scaff5495g039712 on XP_811678 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 926
Score = 22.3 bits (46), Expect = 4.0, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 19 SCDAFDPAAEATNNDRVTV 37
+ DA+DP AEA +D V
Sbjct: 830 TADAYDPNAEAMGHDGTAV 848
>M.Javanica_Scaff5495g039712 on XP_820141 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 925
Score = 22.3 bits (46), Expect = 4.2, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 19 SCDAFDPAAEATNNDRVTV 37
+ DA+DP AEA +D V
Sbjct: 831 TADAYDPNAEAMGHDGTAV 849
>M.Javanica_Scaff5495g039712 on XP_809607 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 920
Score = 22.3 bits (46), Expect = 4.2, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 19 SCDAFDPAAEATNNDRVTV 37
+ DA+DP AEA +D V
Sbjct: 825 TADAYDPNAEAMGHDGTAV 843
>M.Javanica_Scaff5495g039712 on XP_805336 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 931
Score = 21.6 bits (44), Expect = 6.2, Method: Composition-based stats.
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 21 DAFDPAAEATNNDRVTV 37
DA+DP AEA +D V
Sbjct: 838 DAYDPNAEAMGHDGTAV 854
>M.Javanica_Scaff5495g039712 on XP_811677 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 935
Score = 21.6 bits (44), Expect = 7.6, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 19 SCDAFDPAAEATNNDRVTV 37
+ DA+ P AEAT +D V
Sbjct: 840 TADAYAPNAEATGHDGTAV 858
>M.Javanica_Scaff5495g039712 on XP_812793 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 920
Score = 21.2 bits (43), Expect = 9.5, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 19 SCDAFDPAAEATNNDRVTV 37
+ DA+ P AEAT +D V
Sbjct: 824 TADAYAPNAEATGHDGTAV 842
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7331g047653
(227 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum] 25 6.0
>M.Javanica_Scaff7331g047653 on XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum]
Length = 3130
Score = 24.6 bits (52), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 7 LIFLIFNSILWSLINSVKNNTNQNELNEG 35
L LIF+SI LI + + N NE+NE
Sbjct: 3075 LCVLIFSSIGLLLIKTNSGDNNSNEINEA 3103
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff27223g093446
(123 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff372g005475
(98 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001608667 variant erythrocyte surface antigen-1, beta subuni... 24 1.7
XP_001349738 PfEMP1 (Establishment) [Plasmodium falciparum] 24 1.8
XP_001351564 PfEMP1 (Establishment) [Plasmodium falciparum] 24 1.8
XP_001349036 PfEMP1 (Establishment) [Plasmodium falciparum] 23 4.4
XP_820143 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.6
>M.Javanica_Scaff372g005475 on XP_001608667 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1139
Score = 24.3 bits (51), Expect = 1.7, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 6/41 (14%)
Query: 57 GGDFAGGAGAPCPKSQCFYGGINCVPCRRPKANRYWKAVFG 97
G +GGA C Y C P +P + YW + G
Sbjct: 188 GTSSSGGADQKC------YLSAYCKPTAQPSGDSYWPTISG 222
>M.Javanica_Scaff372g005475 on XP_001349738 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2162
Score = 24.3 bits (51), Expect = 1.8, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 14/33 (42%)
Query: 53 IGEGGGDFAGGAGAPCPKSQCFYGGINCVPCRR 85
I GG+ A G S GG CVP RR
Sbjct: 884 IPTSGGEKATGGSGESTGSDATTGGSICVPPRR 916
>M.Javanica_Scaff372g005475 on XP_001351564 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2207
Score = 24.3 bits (51), Expect = 1.8, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 14/33 (42%)
Query: 53 IGEGGGDFAGGAGAPCPKSQCFYGGINCVPCRR 85
I GG+ A G S GG CVP RR
Sbjct: 884 IPTSGGEKATGGSGESTGSDATTGGSICVPPRR 916
>M.Javanica_Scaff372g005475 on XP_001349036 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2192
Score = 23.1 bits (48), Expect = 4.4, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 12/26 (46%)
Query: 58 GDFAGGAGAPCPKSQCFYGGINCVPC 83
GD GA A ++ FY C PC
Sbjct: 499 GDRGKGASADSNSNKTFYRSEYCQPC 524
>M.Javanica_Scaff372g005475 on XP_820143 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 869
Score = 23.1 bits (48), Expect = 4.6, Method: Composition-based stats.
Identities = 9/16 (56%), Positives = 10/16 (62%)
Query: 52 GIGEGGGDFAGGAGAP 67
GI EGGG+ GAP
Sbjct: 77 GINEGGGETVDSLGAP 92
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff25369g090796
(78 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5042g037538
(112 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5227g038436
(87 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_829797 VSG (Establishment) [Trypanosoma brucei] 25 0.41
XP_843644 VSG (Establishment) [Trypanosoma brucei] 24 1.4
XP_821683 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.0
XP_829798 VSG (Establishment) [Trypanosoma brucei] 23 4.0
XP_827755 VSG (Establishment) [Trypanosoma brucei] 22 5.1
XP_803373 VSG (Establishment) [Trypanosoma brucei] 22 7.3
XP_827768 VSG (Establishment) [Trypanosoma brucei] 22 7.6
AAD03350 MIC1 (Adhesin) [Eimeria tenella] 22 9.1
>M.Javanica_Scaff5227g038436 on XP_829797 VSG (Establishment) [Trypanosoma brucei]
Length = 509
Score = 25.4 bits (54), Expect = 0.41, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 24 EISAKAVAKSGDDGI-CKGKCNSIVRGDICCRVDPNKIEKEITCCKR 69
+ S+ V + GD G KCN IV + C + + EKE KR
Sbjct: 390 QTSSDNVNRKGDQGTQPTNKCNQIVTEETCNKENECSYEKESDGTKR 436
>M.Javanica_Scaff5227g038436 on XP_843644 VSG (Establishment) [Trypanosoma brucei]
Length = 490
Score = 24.3 bits (51), Expect = 1.4, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 55 VDPNKIEKEITCCKRDVGCDNINGGCKLE 83
++ K + E T C D C++ G CKL+
Sbjct: 427 IEKCKEDTEETKCTEDADCEHKGGKCKLK 455
>M.Javanica_Scaff5227g038436 on XP_821683 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 879
Score = 22.7 bits (47), Expect = 4.0, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 1/69 (1%)
Query: 17 LLSNKFSEISAKAVAKSGDDGICKGKCNSIVRGDICCRVDPNKIEKEITCCKRDVGCDNI 76
L NK + IS K+ D S V+G + ++ E K ++G D +
Sbjct: 718 LAKNKIT-ISKPEGPKTSMDTQSSATSGSPVQGAVSLSNSARQLPSEQETLKENIGADGV 776
Query: 77 NGGCKLERP 85
+G + P
Sbjct: 777 SGAASVTTP 785
>M.Javanica_Scaff5227g038436 on XP_829798 VSG (Establishment) [Trypanosoma brucei]
Length = 482
Score = 22.7 bits (47), Expect = 4.0, Method: Composition-based stats.
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 61 EKEITCCKRDVGCDNINGGCKLE 83
E E + C D C++ +G CKL+
Sbjct: 422 ETEKSKCTADKDCEHSDGKCKLK 444
>M.Javanica_Scaff5227g038436 on XP_827755 VSG (Establishment) [Trypanosoma brucei]
Length = 510
Score = 22.3 bits (46), Expect = 5.1, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 59 KIEKEITCCKRDVGCDNINGGCKLE 83
K EK+ T C GC+ +G CK++
Sbjct: 451 KGEKDETKCNNKDGCEYKDGECKVK 475
>M.Javanica_Scaff5227g038436 on XP_803373 VSG (Establishment) [Trypanosoma brucei]
Length = 499
Score = 21.9 bits (45), Expect = 7.3, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Query: 18 LSNKFSEISAKAVA-KSGDDGICKGKCNSIVRGDICCRVDPNKIEKEITCC 67
LS K E + K A ++G DG + KC D C +V E + C
Sbjct: 417 LSEKGKEAAEKVAANQAGTDGKNESKCGEAKTEDECKKVPGKTPEGKKAVC 467
>M.Javanica_Scaff5227g038436 on XP_827768 VSG (Establishment) [Trypanosoma brucei]
Length = 489
Score = 21.9 bits (45), Expect = 7.6, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 5/31 (16%)
Query: 55 VDPNKIE-----KEITCCKRDVGCDNINGGC 80
VDP K E K+ T C + GC+ +G C
Sbjct: 423 VDPQKSEDCKGEKDETKCNKKDGCEFKDGEC 453
>M.Javanica_Scaff5227g038436 on AAD03350 MIC1 (Adhesin) [Eimeria tenella]
Length = 255
Score = 21.6 bits (44), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 10 AFLFTVLLLSNKFSEISAKAVAKSGDDGIC 39
+ L +L S FS + A SG D +C
Sbjct: 16 SLLVGLLAASFAFSSLQPGATTSSGQDQVC 45
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff25922g091616
(71 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAM47174 Rh4 (Adhesin) [Plasmodium falciparum] 23 2.4
AAM47175 Rh4 (Adhesin) [Plasmodium falciparum] 23 2.4
AAM47192 Rh4 (Adhesin) [Plasmodium falciparum] 23 2.4
>M.Javanica_Scaff25922g091616 on AAM47174 Rh4 (Adhesin) [Plasmodium falciparum]
Length = 1711
Score = 22.7 bits (47), Expect = 2.4, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 38 NTKVDQNREENQNKEEKPLVGS-NITFEKHTRKYK 71
N K+ Q +N+E+ ++ S N EK+T K++
Sbjct: 215 NKKISQQNYNQENQEKSKMIDSENEKLEKYTNKFE 249
>M.Javanica_Scaff25922g091616 on AAM47175 Rh4 (Adhesin) [Plasmodium falciparum]
Length = 1711
Score = 22.7 bits (47), Expect = 2.4, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 38 NTKVDQNREENQNKEEKPLVGS-NITFEKHTRKYK 71
N K+ Q +N+E+ ++ S N EK+T K++
Sbjct: 215 NKKISQQNYNQENQEKSKMIDSENEKLEKYTNKFE 249
>M.Javanica_Scaff25922g091616 on AAM47192 Rh4 (Adhesin) [Plasmodium falciparum]
Length = 1716
Score = 22.7 bits (47), Expect = 2.4, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 38 NTKVDQNREENQNKEEKPLVGS-NITFEKHTRKYK 71
N K+ Q +N+E+ ++ S N EK+T K++
Sbjct: 215 NKKISQQNYNQENQEKSKMIDSENEKLEKYTNKFE 249
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff486g006817
(119 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001611366 variant erythrocyte surface antigen-1, beta subuni... 26 0.64
XP_001610496 variant erythrocyte surface antigen-1, beta subuni... 25 0.97
XP_001608667 variant erythrocyte surface antigen-1, beta subuni... 24 3.9
XP_810529 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.9
XP_001349738 PfEMP1 (Establishment) [Plasmodium falciparum] 23 7.3
XP_001609566 variant erythrocyte surface antigen-1, beta subuni... 23 8.1
XP_001351564 PfEMP1 (Establishment) [Plasmodium falciparum] 23 9.0
XP_001351221 CTRP (Adhesin) [Plasmodium falciparum] 23 9.1
>M.Javanica_Scaff486g006817 on XP_001611366 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1173
Score = 26.2 bits (56), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 14/29 (48%)
Query: 55 GGGCGGGGGGGGCGGGCGGGGGGGGCGGG 83
G GC G GG GCG C G G C G
Sbjct: 992 GDGCQGQAGGSGCGNDCRSGSHGTTCSGA 1020
Score = 23.5 bits (49), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 15/32 (46%)
Query: 68 GGGCGGGGGGGGCGGGCGGGGGGGGGGGGGQA 99
G GC G GG GCG C G G G G A
Sbjct: 992 GDGCQGQAGGSGCGNDCRSGSHGTTCSGAGSA 1023
>M.Javanica_Scaff486g006817 on XP_001610496 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1159
Score = 25.4 bits (54), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 14/29 (48%)
Query: 55 GGGCGGGGGGGGCGGGCGGGGGGGGCGGG 83
G GC G G GCG C G G C GG
Sbjct: 977 GDGCTGKAGAVGCGESCKAGSHGMPCSGG 1005
Score = 23.5 bits (49), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 12/26 (46%)
Query: 45 CCGGGGGGGCGGGCGGGGGGGGCGGG 70
C G G GCG C G G C GG
Sbjct: 980 CTGKAGAVGCGESCKAGSHGMPCSGG 1005
>M.Javanica_Scaff486g006817 on XP_001608667 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1139
Score = 23.9 bits (50), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 16/45 (35%)
Query: 46 CGGGGGGGCGGGCGGGGGGGGCGGGCGGGGGGGGCGGGCGGGGGG 90
C G GC C G G C G G G G GG G G
Sbjct: 935 CQSQQGTGCDSSCTRGTHGNTCPAGSGSAGSAVGGKGGSGVASSG 979
Score = 23.9 bits (50), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 14/34 (41%)
Query: 64 GGGCGGGCGGGGGGGGCGGGCGGGGGGGGGGGGG 97
G GC C G G C G G G GG GG
Sbjct: 940 GTGCDSSCTRGTHGNTCPAGSGSAGSAVGGKGGS 973
>M.Javanica_Scaff486g006817 on XP_810529 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 791
Score = 23.9 bits (50), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 12/41 (29%)
Query: 39 LRVKKQCCGGGGGGGCGGGCGGGGGGGGCGGGCGGGGGGGG 79
L V CCGG G G G G G G
Sbjct: 51 LIVVTMCCGGAATAQVGSNADASTPGSALTGAIAGEGSASG 91
Score = 22.7 bits (47), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 13/43 (30%)
Query: 60 GGGGGGGCGGGCGGGGGGGGCGGGCGGGGGGGGGGGGGQAITL 102
GG G G G G G GG G Q + L
Sbjct: 59 GGAATAQVGSNADASTPGSALTGAIAGEGSASGGVEGLQRVDL 101
>M.Javanica_Scaff486g006817 on XP_001349738 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2162
Score = 23.1 bits (48), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 22/67 (32%), Gaps = 14/67 (20%)
Query: 20 TNAGLFGNGDILPPSFLRGLRVKKQCCG---GGGGGGCGGGCGGGGGGGGCGGGCGGGGG 76
T A LF N D L K+ C GG G C GG GG G G
Sbjct: 853 TVAELFSNVDNL-----------KEACTQKYGGNNSRLGWKCIPTSGGEKATGGSGESTG 901
Query: 77 GGGCGGG 83
GG
Sbjct: 902 SDATTGG 908
>M.Javanica_Scaff486g006817 on XP_001609566 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1062
Score = 22.7 bits (47), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 12/34 (35%), Gaps = 2/34 (5%)
Query: 44 QCCGGGGGGGCGG--GCGGGGGGGGCGGGCGGGG 75
QCC G GG C CG G G C
Sbjct: 163 QCCTGAGGTTCHDCTKCGTGASSGSADKKCYQSA 196
>M.Javanica_Scaff486g006817 on XP_001351564 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2207
Score = 22.7 bits (47), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 22/67 (32%), Gaps = 14/67 (20%)
Query: 20 TNAGLFGNGDILPPSFLRGLRVKKQCCG---GGGGGGCGGGCGGGGGGGGCGGGCGGGGG 76
T A LF N D L K+ C GG G C GG GG G G
Sbjct: 853 TVAELFSNVDNL-----------KEACTQKYGGNNSRLGWKCIPTSGGEKATGGSGESTG 901
Query: 77 GGGCGGG 83
GG
Sbjct: 902 SDATTGG 908
>M.Javanica_Scaff486g006817 on XP_001351221 CTRP (Adhesin) [Plasmodium falciparum]
Length = 2112
Score = 22.7 bits (47), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 9/24 (37%), Positives = 9/24 (37%)
Query: 51 GGGCGGGCGGGGGGGGCGGGCGGG 74
GC CG G C CG G
Sbjct: 1588 NAGCNDMCGDFGEWSECSATCGEG 1611
Score = 22.7 bits (47), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 9/24 (37%), Positives = 9/24 (37%)
Query: 64 GGGCGGGCGGGGGGGGCGGGCGGG 87
GC CG G C CG G
Sbjct: 1588 NAGCNDMCGDFGEWSECSATCGEG 1611
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff535g007328
(130 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4g000112
(170 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3861g031592
(62 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_806228 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 2.5
XP_816523 Trans-sialidase (Invasion) [Trypanosoma cruzi] 21 8.5
XP_807431 Trans-sialidase (Invasion) [Trypanosoma cruzi] 21 9.2
>M.Javanica_Scaff3861g031592 on XP_806228 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1204
Score = 22.3 bits (46), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 7/28 (25%), Positives = 18/28 (64%)
Query: 29 QINKSRSVSESVSALPFHSPLQTQLFFP 56
++ KS + ++ +++ + SP+ + FFP
Sbjct: 169 EVTKSTAGGKTTASIKWGSPVSLKKFFP 196
>M.Javanica_Scaff3861g031592 on XP_816523 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 892
Score = 20.8 bits (42), Expect = 8.5, Method: Composition-based stats.
Identities = 7/28 (25%), Positives = 18/28 (64%)
Query: 29 QINKSRSVSESVSALPFHSPLQTQLFFP 56
++ KS + ++ +++ + SP+ + FFP
Sbjct: 169 EVTKSTAGGKTTASIKWGSPVSLKKFFP 196
>M.Javanica_Scaff3861g031592 on XP_807431 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 940
Score = 20.8 bits (42), Expect = 9.2, Method: Composition-based stats.
Identities = 7/28 (25%), Positives = 18/28 (64%)
Query: 29 QINKSRSVSESVSALPFHSPLQTQLFFP 56
++ KS + ++ +++ + SP+ + FFP
Sbjct: 169 EVTKSTAGGKTTASIKWGSPVSLKKFFP 196
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6275g043212
(82 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351221 CTRP (Adhesin) [Plasmodium falciparum] 23 4.3
XP_812792 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 9.0
>M.Javanica_Scaff6275g043212 on XP_001351221 CTRP (Adhesin) [Plasmodium falciparum]
Length = 2112
Score = 22.7 bits (47), Expect = 4.3, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Query: 47 LTVAILRQIAINKRRAAQNEAHNNINVYSIQGRNYV 82
T I++ + I+K NE H I ++S + R+YV
Sbjct: 108 FTDKIIKDLTISK-----NEVHVGILLFSSKNRDYV 138
>M.Javanica_Scaff6275g043212 on XP_812792 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 879
Score = 21.6 bits (44), Expect = 9.0, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
Query: 56 AINKRRAAQNEAHNN---INVYSIQGRNY 81
A+ K+ A+N+A NN + +YS N+
Sbjct: 270 AVKKKDVAENDAKNNNVSLIIYSSDSANW 298
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5159g038126
(299 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_827747 VSG (Establishment) [Trypanosoma brucei] 26 2.4
ABW16954 ROM1 (Invasion) [Plasmodium falciparum] 25 6.4
>M.Javanica_Scaff5159g038126 on XP_827747 VSG (Establishment) [Trypanosoma brucei]
Length = 509
Score = 26.2 bits (56), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 34 KNNWTVNYGSWLT-----LPSLDFAAAAYSTDPSPCLEKHKA--KLVLRVQVPCDAFRDE 86
K NW N+ + +T + +L AAY+ DP P HK K+ Q C+ +
Sbjct: 169 KKNWETNHKAHVTGLKAAVTTL-LNKAAYNVDPVPAQSNHKCNVKVDTSRQKTCELPK-- 225
Query: 87 CWAFIAISKHFIIFSVRGTQTQTQLIVEIIESMTAPKKEFPAGGSVQHY-FYESL 140
A AI + +G+ TQ++ I +S T ++ +G HY Y+S+
Sbjct: 226 --AGEAICGALVCICAKGS-TQSKDICG--DSSTPNLSDWSSGNMKTHYATYDSI 275
>M.Javanica_Scaff5159g038126 on ABW16954 ROM1 (Invasion) [Plasmodium falciparum]
Length = 278
Score = 24.6 bits (52), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 191 IKPKELLLVTFGQPRVGNIEYAKLHRRLVP 220
+ P + LLVT G I+ ++HR ++P
Sbjct: 79 LTPSDSLLVTLGANVASRIKQGEIHRLILP 108
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7711g049169
(113 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349219 PfEMP1 (Establishment) [Plasmodium falciparum] 26 0.66
XP_821548 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.5
AAM47175 Rh4 (Adhesin) [Plasmodium falciparum] 24 3.4
AAM47192 Rh4 (Adhesin) [Plasmodium falciparum] 24 3.4
AAM47174 Rh4 (Adhesin) [Plasmodium falciparum] 24 3.4
XP_810753 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 7.5
>M.Javanica_Scaff7711g049169 on XP_001349219 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2595
Score = 25.8 bits (55), Expect = 0.66, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 54 SFLIKILNKIDINEDYKNYQSIQAL---LNEKGVEVINEDNELEVGDPLVGEFQQKI 107
S L +++ +ID+ D KNY S++ L L G + + ++ + L+G + KI
Sbjct: 1575 SILEELIPQIDVTIDKKNYTSLEELEKTLKCNGSDKSQNGTQKDIIECLLGNLKDKI 1631
>M.Javanica_Scaff7711g049169 on XP_821548 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 958
Score = 24.3 bits (51), Expect = 2.5, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 80 NEKGVEVINEDNELEVGDPLVGE 102
NEKGV+ I+ N EV P GE
Sbjct: 272 NEKGVKTIHWKNINEVSRPSFGE 294
>M.Javanica_Scaff7711g049169 on AAM47175 Rh4 (Adhesin) [Plasmodium falciparum]
Length = 1711
Score = 23.9 bits (50), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 86 VINEDNELEVGDPLVGEFQQKIRAVR 111
VIN++N L+ + + E Q KI+ ++
Sbjct: 1234 VINDNNTLQEQNRIYNELQNKIKQIK 1259
>M.Javanica_Scaff7711g049169 on AAM47192 Rh4 (Adhesin) [Plasmodium falciparum]
Length = 1716
Score = 23.9 bits (50), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 86 VINEDNELEVGDPLVGEFQQKIRAVR 111
VIN++N L+ + + E Q KI+ ++
Sbjct: 1233 VINDNNTLQEQNRIYNELQNKIKQIK 1258
>M.Javanica_Scaff7711g049169 on AAM47174 Rh4 (Adhesin) [Plasmodium falciparum]
Length = 1711
Score = 23.9 bits (50), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 86 VINEDNELEVGDPLVGEFQQKIRAVR 111
VIN++N L+ + + E Q KI+ ++
Sbjct: 1232 VINDNNTLQEQNRIYNELQNKIKQIK 1257
>M.Javanica_Scaff7711g049169 on XP_810753 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 955
Score = 22.7 bits (47), Expect = 7.5, Method: Composition-based stats.
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 80 NEKGVEVINEDNELEVGDPLVGE 102
NEKGV+ I+ N +V P GE
Sbjct: 269 NEKGVKTIHWKNINDVSRPSFGE 291
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5475g039620
(63 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_808582 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.20
XP_811521 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.20
XP_816557 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.20
XP_813679 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.29
XP_807454 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 2.9
XP_808590 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.8
XP_803124 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.8
XP_808589 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.8
XP_812044 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.8
>M.Javanica_Scaff5475g039620 on XP_808582 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 786
Score = 25.4 bits (54), Expect = 0.20, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 24 IPSPEEIKAAIRRSTINRT 42
+P P E+ AA R+T+ RT
Sbjct: 714 VPGPREVPAAPGRTTVGRT 732
>M.Javanica_Scaff5475g039620 on XP_811521 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 830
Score = 25.4 bits (54), Expect = 0.20, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 24 IPSPEEIKAAIRRSTINRT 42
+P P E+ AA R+T+ RT
Sbjct: 757 VPGPREVPAAPGRTTVGRT 775
>M.Javanica_Scaff5475g039620 on XP_816557 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 834
Score = 25.4 bits (54), Expect = 0.20, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 24 IPSPEEIKAAIRRSTINRT 42
+P P E+ AA R+T+ RT
Sbjct: 761 VPGPREVPAAPGRTTVGRT 779
>M.Javanica_Scaff5475g039620 on XP_813679 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 823
Score = 25.0 bits (53), Expect = 0.29, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 24 IPSPEEIKAAIRRSTINRT 42
+P P E+ AA R+T+ RT
Sbjct: 750 VPGPRELPAAPGRTTVGRT 768
>M.Javanica_Scaff5475g039620 on XP_807454 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 825
Score = 22.3 bits (46), Expect = 2.9, Method: Composition-based stats.
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 24 IPSPEEIKAAIRRSTINRT 42
+P P E+ AA R+T+ T
Sbjct: 752 VPGPRELPAAPGRTTVGTT 770
>M.Javanica_Scaff5475g039620 on XP_808590 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 574
Score = 21.6 bits (44), Expect = 5.8, Method: Composition-based stats.
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 27 PEEIKAAIRRSTINRT 42
P E+ AA R+T+ RT
Sbjct: 504 PREVPAAPGRTTVGRT 519
>M.Javanica_Scaff5475g039620 on XP_803124 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 620
Score = 21.6 bits (44), Expect = 5.8, Method: Composition-based stats.
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 27 PEEIKAAIRRSTINRT 42
P E+ AA R+T+ RT
Sbjct: 550 PREVPAAPGRTTVGRT 565
>M.Javanica_Scaff5475g039620 on XP_808589 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 853
Score = 21.6 bits (44), Expect = 5.8, Method: Composition-based stats.
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 27 PEEIKAAIRRSTINRT 42
P E+ AA R+T+ RT
Sbjct: 783 PREVPAAPGRTTVGRT 798
>M.Javanica_Scaff5475g039620 on XP_812044 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 855
Score = 21.6 bits (44), Expect = 5.8, Method: Composition-based stats.
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 27 PEEIKAAIRRSTINRT 42
P E+ AA R+T+ RT
Sbjct: 785 PREVPAAPGRTTVGRT 800
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7122g046830
(162 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350582 PTRAMP (Adhesin) [Plasmodium falciparum] 25 1.7
AAK19758 MIC9 (Others) [Toxoplasma gondii] 24 5.4
>M.Javanica_Scaff7122g046830 on XP_001350582 PTRAMP (Adhesin) [Plasmodium falciparum]
Length = 352
Score = 25.4 bits (54), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 88 VQLGTADVESVLDIAVLDGRMEKRLDRSYRALRLR 122
V L T DV + D+ +L+G ++ L +S A R+
Sbjct: 161 VLLKTTDVFNTSDLEILEGPIQFSLGKSSGAFRIN 195
>M.Javanica_Scaff7122g046830 on AAK19758 MIC9 (Others) [Toxoplasma gondii]
Length = 255
Score = 23.9 bits (50), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 113 DRSYRALRLRKRTTPLASIPC 133
D R R++ TTP +S PC
Sbjct: 148 DTGSRCQRIKSTTTPCSSQPC 168
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4635g035585
(103 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_820757 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.1
XP_802208 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.7
>M.Javanica_Scaff4635g035585 on XP_820757 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 912
Score = 25.0 bits (53), Expect = 1.1, Method: Composition-based stats.
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 65 QDKLKRNFNGVTIKINLCEECVSKNCN 91
Q+ LK + +K + EEC S N N
Sbjct: 136 QESLKGELDTTAVKTQVLEECPSDNAN 162
>M.Javanica_Scaff4635g035585 on XP_802208 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 410
Score = 24.3 bits (51), Expect = 1.7, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 55 NGCRDNLFKSQDKLKRNFNGVTIKINLCEECVSK 88
NG L D+ ++ + +K + EEC SK
Sbjct: 101 NGIASELLTLTDQERKELDTAQVKTQVLEECSSK 134
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4386g034346
(412 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7958g050130
(439 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_807986 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 1.00
XP_805548 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 1.3
XP_807842 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 4.6
XP_809739 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 4.6
XP_808156 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 6.9
XP_966151 TLP (Invasion) [Plasmodium falciparum] 25 8.8
>M.Javanica_Scaff7958g050130 on XP_807986 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1054
Score = 28.5 bits (62), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 19/147 (12%)
Query: 59 PKMSTEEHSTGEIGKGNDSLGQSTELPKVQEEDGVHLEVTEKFSIQKEESEADHEVPDTN 118
P + E+ STG++ + S+ + + +E H ++TE + ++EE + VP
Sbjct: 722 PSLGVEKQSTGQVAGTDASVASES---RSEESATSHEKLTEDDTDKQEEESVHNPVPAAP 778
Query: 119 HEDEVVNNEVSNDQQMFE--SNEIPKPKYPTSKEDKDSLEKDEKHEENDKNEGNE----- 171
+ V E N +P ED L + ++ NEGNE
Sbjct: 779 PSTVAAGSSVPKPATAAEIAGNSLP--------EDNAQLSEGRTAQQATPNEGNESMQRG 830
Query: 172 -DVKNEENKEEENDEENKEKSKEEKNN 197
DV+ ++ + EE E N K E N+
Sbjct: 831 SDVQTQDLQAEELTEFNDVKGSSESND 857
>M.Javanica_Scaff7958g050130 on XP_805548 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1044
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 14/96 (14%)
Query: 50 LDE--STQTDEPKMSTEEHSTGEIGKGNDSLGQSTELPKVQE----EDGVHLEVTEKFSI 103
LDE +++ + P + EE TG++ ST+LP E E ++ E+TE +
Sbjct: 702 LDELKASKVNIPSLGVEEQPTGQVA--------STDLPVASESKSEESAIYEELTEDDTD 753
Query: 104 QKEESEADHEVPDTNHEDEVVNNEVSNDQQMFESNE 139
++EE VP T V + +S ES E
Sbjct: 754 KREEEIVHDPVPATPPSTVVAGSSISEPAIAAESAE 789
>M.Javanica_Scaff7958g050130 on XP_807842 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1043
Score = 26.2 bits (56), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
Query: 59 PKMSTEEHSTGEIGKGNDSLGQSTELPKVQEEDGVHLEVTEKFSIQKEESEADHEVPDTN 118
P + E+ TG++ + S+ + K E H E+TE +++EE+ D V
Sbjct: 711 PSLGVEKQPTGQVTSTDVSVASES---KSAESATSHKELTENDRVEQEENSVDDLVLAVP 767
Query: 119 HEDEVVNNEVSNDQQMFESNEIPKPKYPTSKEDKDSLEKDEKHEEN 164
V + VS ES E +P+ + +++++ HE+N
Sbjct: 768 FSTFVAGSYVSGLATAAESAENSRPENNVQLSEGETVQQATLHEDN 813
>M.Javanica_Scaff7958g050130 on XP_809739 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1043
Score = 26.2 bits (56), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
Query: 59 PKMSTEEHSTGEIGKGNDSLGQSTELPKVQEEDGVHLEVTEKFSIQKEESEADHEVPDTN 118
P + E+ TG++ + S+ + K E H E+TE +++EE+ D V
Sbjct: 711 PSLGVEKQPTGQVTSTDVSVASES---KSAESATSHKELTENDRVEQEENSVDDLVLAVP 767
Query: 119 HEDEVVNNEVSNDQQMFESNEIPKPKYPTSKEDKDSLEKDEKHEEN 164
V + VS ES E +P+ + +++++ HE+N
Sbjct: 768 FSTFVAGSYVSGLATAAESAENSRPENNVQLSEGETVQQATLHEDN 813
>M.Javanica_Scaff7958g050130 on XP_808156 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1058
Score = 25.8 bits (55), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 17/154 (11%)
Query: 59 PKMSTEEHSTGEIGKGNDSLGQSTELPKVQEEDGVHLEVTEKFSIQKEESEADHEVPDTN 118
P + EE STG++ + S+ + EE + ++ E + ++EE AD VP
Sbjct: 727 PSLGVEEKSTGQVASTDVSVASESR----SEESTTYEKLAEGDTDKQEEESADDPVPAAP 782
Query: 119 HEDEVVNNEVS----------NDQQ--MFESNEIPKPKYPTSKEDKDSLEKDEKHEEND- 165
V + VS N Q F+ +E + T ED S+++D + + +
Sbjct: 783 SFTVVAGSSVSEPAIAVESAGNSHQENNFQLSEGKTAQQATLNEDNKSMQRDSEVQPREL 842
Query: 166 KNEGNEDVKNEENKEEENDEENKEKSKEEKNNDG 199
+ + ++ + E E ND+E E+ E G
Sbjct: 843 PSTKSTEIADVEGSAESNDKEQPEEEGEANGRSG 876
>M.Javanica_Scaff7958g050130 on XP_966151 TLP (Invasion) [Plasmodium falciparum]
Length = 1371
Score = 25.4 bits (54), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 172 DVKNEENKEEENDEENKEKSKEEKNNDGKENIEKQYNEEEEIQDHFNDFIIME 224
D K EE K+E N + E EK +D E+I QYNEE+ D+ ND II++
Sbjct: 629 DNKTEERKDEGNISTSNEHHASEKTDD--EDIITQYNEEDR-HDNSNDNIIID 678
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff25998g091738
(93 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_628559 gp900 (Adhesin) [Cryptosporidium parvum] 23 2.9
XP_001351319 PfEMP1 (Establishment) [Plasmodium falciparum] 23 3.8
XP_818096 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.2
AAA30134 SPAG-1 (Adhesion) [Theileria annulata] 23 4.9
XP_815749 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.9
XP_001349434 PfEMP1 (Establishment) [Plasmodium falciparum] 22 7.9
>M.Javanica_Scaff25998g091738 on XP_628559 gp900 (Adhesin) [Cryptosporidium parvum]
Length = 1937
Score = 23.5 bits (49), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 20 IANVVLTFWLYIYTLNSHGLCESNETPTPDPEPGMSRVTRNPIP 63
I ++ + IY NS L +SN+ P P + G T N P
Sbjct: 923 IEKMLDKYTRMIYDYNSGLLLDSNDEPIPGSQAGQIADTSNLFP 966
>M.Javanica_Scaff25998g091738 on XP_001351319 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2646
Score = 23.1 bits (48), Expect = 3.8, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 45 TPTPDPEPGMSRVTRNPIPETRTFFRPE 72
TP PD E + T NP+ + + F P+
Sbjct: 2065 TPLPDDEDLLLEETENPVGKQQPSFCPK 2092
>M.Javanica_Scaff25998g091738 on XP_818096 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 861
Score = 23.1 bits (48), Expect = 4.2, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 13 KEDFNPNIANVVLTFWLYIYTLNSHGLCESNETPTPDPEP 52
+ED + + NV L ++ + L E +++P+ D EP
Sbjct: 715 REDVSVTVRNVFLYNRPLTFSGGNANLEEDSDSPSADQEP 754
>M.Javanica_Scaff25998g091738 on AAA30134 SPAG-1 (Adhesion) [Theileria annulata]
Length = 907
Score = 22.7 bits (47), Expect = 4.9, Method: Composition-based stats.
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 41 ESNETPTPDPEPGMSRVTRNPIPETRTF 68
+S PTP EP ++R + P+ + F
Sbjct: 72 DSKTVPTPVSEPMITRSFQEPVSQELEF 99
>M.Javanica_Scaff25998g091738 on XP_815749 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1053
Score = 22.3 bits (46), Expect = 5.9, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Query: 38 GLCESNETPTPDPEP---GMSRVTRNPI 62
G ESN+TP P+ E MS T +P+
Sbjct: 851 GPSESNDTPQPEEEEEANDMSDGTTSPL 878
>M.Javanica_Scaff25998g091738 on XP_001349434 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2109
Score = 22.3 bits (46), Expect = 7.9, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 74 RNPTRGKFRKPDPKPDFFH 92
+N + K R DPK DFF
Sbjct: 230 KNVDKAKARYNDPKGDFFQ 248
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff789g009915
(136 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_845141 VSG (Establishment) [Trypanosoma brucei] 23 5.1
XP_001350798 PfEMP1 (Establishment) [Plasmodium falciparum] 23 8.7
XP_828103 VSG (Establishment) [Trypanosoma brucei] 23 10.0
>M.Javanica_Scaff789g009915 on XP_845141 VSG (Establishment) [Trypanosoma brucei]
Length = 486
Score = 23.5 bits (49), Expect = 5.1, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Query: 33 VHLSLARQTAIQKKEKEIKILKNSKINFNLLIKKIKVVLKKMDEFVKTNIKP 84
+H +Q Q ++K ++K NF +K+K L K+DE N+ P
Sbjct: 305 LHKLYGKQAGKQAEDKAEVLIKE---NFGEAGEKVKSFLNKLDEADAINVDP 353
>M.Javanica_Scaff789g009915 on XP_001350798 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2359
Score = 23.1 bits (48), Expect = 8.7, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Query: 65 KKIKVVLKKMDEFVKTNIKPQNLPLKVEMEMEKILVDQTKIELVNT-----LIKEMKKEL 119
K K +L K+ + V +K ++ K E+E L + +EL +T LIKE + L
Sbjct: 14 KDAKELLDKIGQQVHDKVKSESNGFKDELEGSLSLAKVSGVELADTLDPCKLIKEKHENL 73
>M.Javanica_Scaff789g009915 on XP_828103 VSG (Establishment) [Trypanosoma brucei]
Length = 472
Score = 22.7 bits (47), Expect = 10.0, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Query: 94 EMEKIL--VDQTKIELVNTLIKEMKKELRTKGVK 125
E++K+L Q ++ +N I +KK+L+ G K
Sbjct: 364 ELDKLLRHYQQARVTSLNKEITNLKKQLKNLGAK 397
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7830g049636
(271 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Q36736 KMP-11 (Others) [Leishmania donovani] 29 0.059
XP_628559 gp900 (Adhesin) [Cryptosporidium parvum] 28 0.56
XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum] 25 6.6
>M.Javanica_Scaff7830g049636 on Q36736 KMP-11 (Others) [Leishmania donovani]
Length = 92
Score = 29.3 bits (64), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 30/42 (71%), Gaps = 3/42 (7%)
Query: 48 ESSVNPQIQKHKEKLKPKLKITKKDTDKGGNKVIDRSEYFKE 89
ES+++P++++H EK + ++ K+ T+K K+ + SE+FK+
Sbjct: 37 ESTLSPEMREHYEKFE---RMIKEHTEKFNKKMHEHSEHFKQ 75
>M.Javanica_Scaff7830g049636 on XP_628559 gp900 (Adhesin) [Cryptosporidium parvum]
Length = 1937
Score = 28.1 bits (61), Expect = 0.56, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 38/96 (39%), Gaps = 9/96 (9%)
Query: 181 NNEGTSFVNPQTGDFTNKGKLLIVCEKI------TEEGNLFNQREGESNNDKDGQNQIEV 234
N+ V+P TG N IV K E GNLF+ +N DG NQ+
Sbjct: 1276 NSTTGELVDPSTGKPINNSTAGIVSGKPGLPPIEDENGNLFDP---STNLPIDGNNQLVN 1332
Query: 235 EEPNKILEDDTTHKDLNKKILPFDLNEKPDDQELQD 270
E N + T+ K +P + D+E +D
Sbjct: 1333 PETNSTVSGSTSGTTKPKPGIPVNGGGVVPDEEAKD 1368
>M.Javanica_Scaff7830g049636 on XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3954
Score = 25.0 bits (53), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 235 EEPNKILEDDT-THKDLNKKILPFDLNEKP 263
EE +L+DDT T + ++ P D+ EKP
Sbjct: 2384 EEETSLLDDDTSTQEKMSPDFCPSDMPEKP 2413
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff25g000617
(194 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_815148 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.1
XP_001611366 variant erythrocyte surface antigen-1, beta subuni... 26 1.6
XP_001611901 variant erythrocyte surface antigen-1, alpha subun... 26 1.6
AAK97081 gGSP (Others) [Giardia duodenalis] 25 4.3
XP_001609666 variant erythrocyte surface antigen-1, alpha subun... 24 6.6
XP_804506 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 6.8
XP_001609040 variant erythrocyte surface antigen-1, alpha subun... 24 7.3
>M.Javanica_Scaff25g000617 on XP_815148 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 882
Score = 26.6 bits (57), Expect = 1.1, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 20/49 (40%)
Query: 9 TTLSIYFLFSQLVTVSQCAPSPVVAYSPPSTPHNINTVISTQKLQKCPP 57
T ++ S L T A +P A SPP P N+ +S PP
Sbjct: 682 TVTNVLLYNSPLSTAEIGALNPNKASSPPVVPDNVQGTLSLSSSAGQPP 730
>M.Javanica_Scaff25g000617 on XP_001611366 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1173
Score = 26.2 bits (56), Expect = 1.6, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 92 KPTNGALKGRGERCCCCDCCCCRP--CCCCCCKPCCCC 127
K T+G KG G+ C C CC P C C C
Sbjct: 146 KGTSGKSKGIGKECKCVGGTCCSPGGSAATTCHDCRTC 183
>M.Javanica_Scaff25g000617 on XP_001611901 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1211
Score = 26.2 bits (56), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 30/94 (31%), Gaps = 11/94 (11%)
Query: 100 GRGERCCCCD----CCCCRPCCCCCCKPCCCCCCKPCCCCCCRPCCCCCRPCCCCCCRPC 155
G G C C D C C C CC C CK C C+ C C + R
Sbjct: 196 GGGSDCTCKDGEDQCAVGTECKCAKAGKCCKCYCKDECKAKCKEECRCDKHSYIMRYRST 255
Query: 156 CCCNCCGCKRHRRNGCNATTVKMVDALPTPPILM 189
K T +K ++ PT L+
Sbjct: 256 YTMELIDAKY-------WTEIKPIEKPPTWADLL 282
>M.Javanica_Scaff25g000617 on AAK97081 gGSP (Others) [Giardia duodenalis]
Length = 255
Score = 24.6 bits (52), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 9/12 (75%), Positives = 9/12 (75%)
Query: 32 VAYSPPSTPHNI 43
V YSPP TP NI
Sbjct: 224 VGYSPPYTPENI 235
>M.Javanica_Scaff25g000617 on XP_001609666 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1269
Score = 24.3 bits (51), Expect = 6.6, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 3/35 (8%)
Query: 95 NGALKGRGERCCCCDCCCCRPCCC---CCCKPCCC 126
NG GRG + C D +PC C C + C C
Sbjct: 120 NGHHLGRGCKKCASDEEAKKPCSCSGDCTAETCKC 154
>M.Javanica_Scaff25g000617 on XP_804506 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1012
Score = 24.3 bits (51), Expect = 6.8, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 15/52 (28%), Gaps = 2/52 (3%)
Query: 111 CCCRPCCCCCCKPCCCCCCKPCCCCCCRPCCCCCRPCCCCCCRPCC--CCNC 160
C R C C P PCC C C C C CC C
Sbjct: 165 CSPRTSCVCVLLPFSVGDGPPCCPFRIVLCPALCVGALLCSPLACLMYCCRC 216
>M.Javanica_Scaff25g000617 on XP_001609040 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1335
Score = 24.3 bits (51), Expect = 7.3, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 13/51 (25%)
Query: 100 GRGERCCCCDCC----CCRPC----CCCCCKPCCCCCCKPCCCCCCRPCCC 142
GRG CD C C +P C C CK C C C R C C
Sbjct: 175 GRG-----CDKCDGDKCGKPGAGGGCQCQCKGGASGCTSASDCKCDRKCGC 220
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff27465g093783
(113 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAZ73239 ROP16 (Establishment) [Toxoplasma gondii] 24 1.7
XP_821703 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.9
XP_828105 VSG (Establishment) [Trypanosoma brucei] 23 5.4
XP_802520 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 6.7
XP_818196 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 6.8
XP_844695 VSG (Establishment) [Trypanosoma brucei] 23 8.3
>M.Javanica_Scaff27465g093783 on AAZ73239 ROP16 (Establishment) [Toxoplasma gondii]
Length = 255
Score = 24.3 bits (51), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 55 YEEIEQGIQLWERAISTLDRFKQTESNPETNSNNR 89
+EE ++ + +R I+TL T SNP + NR
Sbjct: 28 FEEAQKASEAAKRQIATLPSPDSTLSNPGSKHRNR 62
>M.Javanica_Scaff27465g093783 on XP_821703 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 912
Score = 24.6 bits (52), Expect = 1.9, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 71 TLDRFKQTESNPETNSNNRLKRQQAVYRP 99
TL R KQT +N K QQ +RP
Sbjct: 28 TLSRRKQTSANRYCEIRRHQKDQQHTHRP 56
>M.Javanica_Scaff27465g093783 on XP_828105 VSG (Establishment) [Trypanosoma brucei]
Length = 508
Score = 23.1 bits (48), Expect = 5.4, Method: Composition-based stats.
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 64 LWERAISTLDRFKQTESNPETNSNNR 89
LW A+ L K ++N +T +N R
Sbjct: 7 LWSTALIALTSVKTADANIDTGANRR 32
>M.Javanica_Scaff27465g093783 on XP_802520 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 610
Score = 22.7 bits (47), Expect = 6.7, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 20/36 (55%)
Query: 53 RKYEEIEQGIQLWERAISTLDRFKQTESNPETNSNN 88
++ E++++ ++ W+ T+ + TES E S N
Sbjct: 344 KQLEKVKEVLKTWKEVDDTVSKLCTTESVEEDRSPN 379
>M.Javanica_Scaff27465g093783 on XP_818196 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 841
Score = 22.7 bits (47), Expect = 6.8, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 20/36 (55%)
Query: 53 RKYEEIEQGIQLWERAISTLDRFKQTESNPETNSNN 88
++ E++++ ++ W+ T+ + TES E S N
Sbjct: 471 KQLEKVKEVLKTWKEVDDTVSKLCTTESVEEDRSPN 506
>M.Javanica_Scaff27465g093783 on XP_844695 VSG (Establishment) [Trypanosoma brucei]
Length = 476
Score = 22.7 bits (47), Expect = 8.3, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 22/59 (37%), Gaps = 2/59 (3%)
Query: 7 FIIQTYYTLSDYLEFRTIIEMQLKFEPAPFPAATICNLNAFKLSEVRKYEEIEQGIQLW 65
F +T++ EFR + L E A + ATI N E Y E Q W
Sbjct: 293 FTADKAFTMTTTAEFRQRMATALVKEDAKYSTATI--KNQVDTLEKTLYGETSNDFQRW 349
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff273g004255
(245 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_965997 PfEMP1 (Establishment) [Plasmodium falciparum] 25 5.4
XP_812720 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 9.9
>M.Javanica_Scaff273g004255 on XP_965997 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2879
Score = 25.0 bits (53), Expect = 5.4, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
Query: 62 PPKPTNNPNEKESTGNSK-DSEG 83
PPKPT P ES S DS G
Sbjct: 1198 PPKPTGGPGAGESPARSDADSRG 1220
>M.Javanica_Scaff273g004255 on XP_812720 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1041
Score = 24.3 bits (51), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 27/53 (50%), Gaps = 14/53 (26%)
Query: 165 ELPSEASGPSESLEISAGS------------SGLSVESSGPVSASLEVSVETL 205
ELPSE LE S+GS G S ES+ PV+ASL SVET+
Sbjct: 824 ELPSEELTEVTDLERSSGSYDEEMPEEEGEADGRSGESTSPVTASL--SVETV 874
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4060g032660
(249 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349533 PfEMP3 (Establishment) [Plasmodium falciparum] 28 0.87
XP_818396 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.5
XP_805084 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 5.6
>M.Javanica_Scaff4060g032660 on XP_001349533 PfEMP3 (Establishment) [Plasmodium falciparum]
Length = 2441
Score = 27.7 bits (60), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Query: 20 CDGKEAEVKIKDDWKEKREFIYLKNVELKERFV--LKRIERFHKKYCRSCYNIDGFLRPI 77
GKE K +++ +E E Y+KN EL+ + LK K R+ DG
Sbjct: 1040 AKGKEVTNKARENLEEYEEKDYMKNNELQNKGSDGLKENAELKNKELRNKG-SDGLKENA 1098
Query: 78 ELIPKANIFSVKINDGLEYIIELKMRVLIEIG 109
EL K K +DGL+ ELK + L G
Sbjct: 1099 ELKNKE--LRNKGSDGLKENAELKNKELQNKG 1128
>M.Javanica_Scaff4060g032660 on XP_818396 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1044
Score = 25.0 bits (53), Expect = 4.5, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 110 NNKSIQKFLPGLEKRVLRYNNFINKDNNYETCILNESFEKLKINKIELLKENIENYKNKL 169
+ K ++K G E + + F +NY + + +E+L + + E EN L
Sbjct: 500 SEKGVKKVYNGFEVTGVDAHIFWPAGSNYNNVLYSPRYEELTVVATVTINEAPENITPLL 559
Query: 170 ----LSSYWTEINL 179
+ S W E+NL
Sbjct: 560 GVSVVGSTWRELNL 573
>M.Javanica_Scaff4060g032660 on XP_805084 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 828
Score = 25.0 bits (53), Expect = 5.6, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Query: 110 NNKSIQKFLPGLEKRVLRYNNFINKDNNYETCILNESFEKLKINKIELLKENIENYKNKL 169
+ K ++K G E + F +NY + + +E+L + + E EN L
Sbjct: 500 SEKGVKKVYNGFELTGVDARIFWPAGSNYNNALYSPRYEELTVVATVTINEAPENITPLL 559
Query: 170 ----LSSYWTEINL 179
+ S W E+NL
Sbjct: 560 GVSVVGSTWRELNL 573
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6243g043086
(59 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAY44831 MSA-1 (Invasion) [Babesia bovis] 22 3.2
>M.Javanica_Scaff6243g043086 on AAY44831 MSA-1 (Invasion) [Babesia bovis]
Length = 310
Score = 21.9 bits (45), Expect = 3.2, Method: Composition-based stats.
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 41 PQANEHDRSEAVAYY 55
PQ E DR +AV Y+
Sbjct: 152 PQLTEEDRQKAVDYF 166
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff481g006761
(374 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_802197 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.6
XP_821378 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 4.7
AAO72427 SAG2 (Others) [Toxoplasma gondii] 24 9.1
XP_821381 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 9.4
>M.Javanica_Scaff481g006761 on XP_802197 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 117
Score = 25.4 bits (54), Expect = 2.6, Method: Composition-based stats.
Identities = 11/20 (55%), Positives = 12/20 (60%)
Query: 327 CNGGGAAKKGSSSSNTGSKK 346
CN GGAA G + S GS K
Sbjct: 58 CNTGGAASSGVTPSGQGSSK 77
>M.Javanica_Scaff481g006761 on XP_821378 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 934
Score = 25.8 bits (55), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/111 (19%), Positives = 42/111 (37%), Gaps = 2/111 (1%)
Query: 10 LSLTFCIQINAAPPYGQLSVKRSQLVGSNGQPVQLVGMSLFWSSCGEGEGFYNRETVNSL 69
+L + I+ P G + + + L+G+S ++S G+ E ET L
Sbjct: 579 FTLVATVSIDGVPEEGDTHIPLMGVKMDDSGKSVLLGLS--YNSGGKWELSCGEETPKEL 636
Query: 70 KCSWNSNVVRAAMGVEYSGCQRPGYLDAPNVERAKVEAVVKAAIELDMYVI 120
+W + + + +G Q Y+D V + E A + + I
Sbjct: 637 SSTWEKDTTHQVVILLRNGTQGSAYVDGQRVGNGQFELKTAEANRISHFYI 687
>M.Javanica_Scaff481g006761 on AAO72427 SAG2 (Others) [Toxoplasma gondii]
Length = 186
Score = 24.3 bits (51), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 37 SNGQPVQLVGMSLFWSSCGEGEGFYNRETVNSLK 70
S+G V G L S GEG+ FY +E +S K
Sbjct: 49 SSGSVVFQCGDKLTISPSGEGDVFYGKECTDSRK 82
>M.Javanica_Scaff481g006761 on XP_821381 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 934
Score = 25.0 bits (53), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 19/91 (20%), Positives = 36/91 (39%), Gaps = 2/91 (2%)
Query: 10 LSLTFCIQINAAPPYGQLSVKRSQLVGSNGQPVQLVGMSLFWSSCGEGEGFYNRETVNSL 69
+L + I+ P G + + + L+G+S ++S G+ E ET L
Sbjct: 579 FTLVATVSIDGVPQEGDTHIPLMGVKMDDSGKSVLLGLS--YNSGGKWELSCGEETPKEL 636
Query: 70 KCSWNSNVVRAAMGVEYSGCQRPGYLDAPNV 100
+W + + + +G Q Y+D V
Sbjct: 637 SSTWEKDTTHQVVILLRNGTQGSAYVDGERV 667
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff623g008272
(174 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_805179 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.7
XP_815807 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.8
AAM64207 RAP3 (Invasion) [Plasmodium falciparum] 25 3.2
XP_806412 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.4
>M.Javanica_Scaff623g008272 on XP_805179 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 793
Score = 25.8 bits (55), Expect = 1.7, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 10/43 (23%)
Query: 83 GKEGKNALYICDNFYFSHVQFNEYTLTYRGTITSFKIVESWTP 125
GK+GKN LY F Y T T++ K E TP
Sbjct: 562 GKQGKNQLY----------HFANYNFTLVATVSIHKAPEGVTP 594
>M.Javanica_Scaff623g008272 on XP_815807 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 899
Score = 25.0 bits (53), Expect = 2.8, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 83 GKEGKNALYICDNFYFSHV 101
G++G+N LY N+YF+ V
Sbjct: 563 GRQGRNQLYHFANYYFTLV 581
>M.Javanica_Scaff623g008272 on AAM64207 RAP3 (Invasion) [Plasmodium falciparum]
Length = 400
Score = 24.6 bits (52), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 1 MYLKLILYIFLFFLIFINSSIGKRCKCPL 29
M K ++ +FL FL N IG +CK L
Sbjct: 1 MIRKFLISLFLIFLCLNNVVIGNKCKKAL 29
>M.Javanica_Scaff623g008272 on XP_806412 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 619
Score = 24.3 bits (51), Expect = 5.4, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 10/43 (23%)
Query: 83 GKEGKNALYICDNFYFSHVQFNEYTLTYRGTITSFKIVESWTP 125
GK+G+N LY F Y T T++ K E TP
Sbjct: 338 GKQGENQLY----------HFANYNFTLVATVSIHKAPEGVTP 370
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff620g008236
(107 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609936 variant erythrocyte surface antigen-1, beta subuni... 27 0.27
>M.Javanica_Scaff620g008236 on XP_001609936 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1133
Score = 26.9 bits (58), Expect = 0.27, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 21/48 (43%)
Query: 46 SYSSKNCWTKYECERSSSAQGRCKFLLLAASCDPNNVHRLFNIYFSGV 93
S + + C+ C+ +S FL + S D + VH L I+ V
Sbjct: 187 SATGQKCYQSAYCKATSPPSSPTDFLWTSISSDSDKVHLLARIFLGSV 234
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff32g000753
(293 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_802194 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.5
XP_805943 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 5.7
>M.Javanica_Scaff32g000753 on XP_802194 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 172
Score = 25.4 bits (54), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 18/77 (23%)
Query: 127 SPTNGNYKEKLRQWKAELKSRLRGLKIPEQVSPPSNGSDHEGTFTKELPYYVTYNPQTNM 186
SP +G+ K KL W+ + + L++P V NG + V
Sbjct: 69 SPASGSSKGKLFDWRDKKGETVSSLRVPSLV--EMNGD----------VFAVAE------ 110
Query: 187 YQISNQPPLVYTGIASE 203
Q + V+TGIASE
Sbjct: 111 AQCTGTGECVFTGIASE 127
>M.Javanica_Scaff32g000753 on XP_805943 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 983
Score = 25.0 bits (53), Expect = 5.7, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Query: 184 TNMYQISNQP---PLVYTGIASEKTAKPNQQNSTTRKESHKPSPVPDK 228
TN+ + S P P+V + T+ P Q++ +K K PV K
Sbjct: 717 TNVSEPSRHPAIAPVVTPEAQQDATSSPRSQHTPAQKSESKSGPVISK 764
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6074g042325
(195 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_802428 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.6
>M.Javanica_Scaff6074g042325 on XP_802428 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 279
Score = 25.0 bits (53), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 115 KYDANVPYLINSSIIDKSNAPP---GLLLTSERQNYSITFKQIYP 156
++ ANVP + + D +++P TSER++ FKQ +P
Sbjct: 56 RHPANVPVITPEAQQDATSSPRIQHSPAQTSERESGPADFKQTFP 100
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5286g038740
(246 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350798 PfEMP1 (Establishment) [Plasmodium falciparum] 25 5.8
XP_812956 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 9.8
>M.Javanica_Scaff5286g038740 on XP_001350798 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2359
Score = 25.0 bits (53), Expect = 5.8, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 65 GRRSITDRLLGRNKGGGYGGNRNRGVMAGAAGGG 98
GR + + G+N GGG G+R +G + + G
Sbjct: 470 GRINFKNVNSGKNSGGGESGDRGKGASSTSDTSG 503
>M.Javanica_Scaff5286g038740 on XP_812956 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1005
Score = 24.3 bits (51), Expect = 9.8, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 163 NNRPYYWGPQYHPSYQGGGYGGGYGG--GGGGYGA 195
NN+ W Y + Q GY G GGGG GA
Sbjct: 179 NNKKLLWNETYLVNPQAIGYSGSLTEFLGGGGSGA 213
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6079g042351
(156 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_819344 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.4
XP_845633 VSG (Establishment) [Trypanosoma brucei] 24 3.5
XP_001610497 variant erythrocyte surface antigen-1, alpha subun... 24 5.8
XP_001349438 PfEMP1 (Establishment) [Plasmodium falciparum] 24 6.5
>M.Javanica_Scaff6079g042351 on XP_819344 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 861
Score = 25.8 bits (55), Expect = 1.4, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 48 CLGGEGATDDEGYTRRPGKEPVEEMQVEQIQRKGK 82
C G GAT D G T+ G P + +++ G+
Sbjct: 57 CCGTGGATADVGATQAKGSSPEKPFHWRDVKKDGE 91
>M.Javanica_Scaff6079g042351 on XP_845633 VSG (Establishment) [Trypanosoma brucei]
Length = 488
Score = 24.3 bits (51), Expect = 3.5, Method: Composition-based stats.
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 38 HRRFKRGNCSCLGGEGAT 55
HR +K+G C+ G GA+
Sbjct: 222 HRSYKKGACATSGDSGAS 239
>M.Javanica_Scaff6079g042351 on XP_001610497 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1315
Score = 23.9 bits (50), Expect = 5.8, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 27/59 (45%)
Query: 24 KCKCPSKQTKNPLFHRRFKRGNCSCLGGEGATDDEGYTRRPGKEPVEEMQVEQIQRKGK 82
KC K T H+++ G S L G++ R + +++ +VE+ Q KGK
Sbjct: 833 KCGKTPKPTICKTCHQQYNEGFPSPLQAFLEDRLPGFSCRSTMDELDKQEVEKAQNKGK 891
>M.Javanica_Scaff6079g042351 on XP_001349438 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2265
Score = 23.9 bits (50), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Query: 80 KGKKDIKSVLYICDNFFYSHVQFNEIAK 107
K KKD + L NF YS + NEIAK
Sbjct: 533 KPKKDAEGTLI---NFLYSGDETNEIAK 557
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7215g047203
(65 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_808217 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.14
XP_817875 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 0.54
XP_001611442 variant erythrocyte surface antigen-1, alpha subun... 22 4.0
>M.Javanica_Scaff7215g047203 on XP_808217 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 880
Score = 26.2 bits (56), Expect = 0.14, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 13 AQALGSLQRLHDEKRDPHE 31
A+ALG+L R+ R PHE
Sbjct: 334 AEALGTLSRVWGSNRKPHE 352
>M.Javanica_Scaff7215g047203 on XP_817875 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 935
Score = 24.3 bits (51), Expect = 0.54, Method: Composition-based stats.
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 14 QALGSLQRLHDEKRDPHE 31
+ALG+L R+ R PHE
Sbjct: 388 EALGTLSRVWGSNRKPHE 405
>M.Javanica_Scaff7215g047203 on XP_001611442 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1350
Score = 21.9 bits (45), Expect = 4.0, Method: Composition-based stats.
Identities = 8/20 (40%), Positives = 9/20 (45%)
Query: 40 CELKQFDQKDRHVSFGVKHC 59
CE K FD H+ G C
Sbjct: 209 CECKIFDDNGHHLGRGCTRC 228
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2545g023639
(238 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAF14193 SBP3 (Others) [Babesia bovis] 28 0.66
AAC97385 P270 (Establishment) [Trichomonas vaginalis] 25 3.1
CAD98301 Subtilase (Others) [Cryptosporidium parvum] 25 5.6
>M.Javanica_Scaff2545g023639 on AAF14193 SBP3 (Others) [Babesia bovis]
Length = 1089
Score = 27.7 bits (60), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 23 FVKISWREIKENKFEYPHQLT-DETKERFDLKLTETLLEHPEGSREFFGKTDGYDNYHFN 81
FVK+S E ++ +Y T D ++ +L + EHPE +EF + NYH N
Sbjct: 143 FVKVSRAEYNRHRAQYSTPYTLDLCAQKSELLEKNIVEEHPESPQEFTSYQPQF-NYHIN 201
Query: 82 E 82
E
Sbjct: 202 E 202
>M.Javanica_Scaff2545g023639 on AAC97385 P270 (Establishment) [Trichomonas vaginalis]
Length = 255
Score = 25.4 bits (54), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 69 FGKTDGYDNYHFNEFDNIREDLVCEYNLEIFINGYNITEP-IPVKKDSIVYVILYKNKAK 127
F ++ DNY ++ + + E+ +IF + I +P ++KD+ V +IL K +K
Sbjct: 121 FKDSNQNDNYQYS----AEQTVSLEFEAKIFDDDATIAQPQYQIEKDNAVDIILEKKGSK 176
Query: 128 YKIVRKNQE 136
Y +E
Sbjct: 177 YTFTYTTKE 185
>M.Javanica_Scaff2545g023639 on CAD98301 Subtilase (Others) [Cryptosporidium parvum]
Length = 255
Score = 24.6 bits (52), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 10/74 (13%)
Query: 60 EHPEGSREFFGKTDGYDNYHFNEFDNIREDLVCEYNLEIFINGYNITEPIPVKKDSIVYV 119
EH G G D D+Y++ E D+ + E+N E G ++ IP + +
Sbjct: 84 EHILGEFSEMGNMDDEDDYYYQEKDSNQ-----EFNSEKVSRGQGRSKVIPGR-----LI 133
Query: 120 ILYKNKAKYKIVRK 133
I YK K K V++
Sbjct: 134 IKYKEKVLSKAVKE 147
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff8247g051242
(181 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_827709 VSG (Establishment) [Trypanosoma brucei] 25 2.1
XP_001349438 PfEMP1 (Establishment) [Plasmodium falciparum] 24 6.7
XP_827715 VSG (Establishment) [Trypanosoma brucei] 23 9.9
>M.Javanica_Scaff8247g051242 on XP_827709 VSG (Establishment) [Trypanosoma brucei]
Length = 474
Score = 25.4 bits (54), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 62 GLFGIEEYGYLLKECADQGVSSDSIVKTIRCAQQEI 97
G G + +L ++CA S S+ KT+R A+Q+
Sbjct: 241 GSNGAPRWKFLKQKCAGATTSYVSVRKTLRGAKQDF 276
>M.Javanica_Scaff8247g051242 on XP_001349438 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2265
Score = 23.9 bits (50), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 7/36 (19%)
Query: 137 LFELLKKCRNHENYGE-------VHDCIHSKRPKNM 165
L + ++KCR + YG+ +DC +KR +NM
Sbjct: 339 LNDAIQKCRGEDKYGKDRYCDLNGYDCEKTKRGRNM 374
>M.Javanica_Scaff8247g051242 on XP_827715 VSG (Establishment) [Trypanosoma brucei]
Length = 473
Score = 23.5 bits (49), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 7/63 (11%)
Query: 65 GIEEYGYLLKECADQGVSSDSIVKTIRCAQQE-------IHGENAVEICKAYCCELFRDN 117
G++ + +L ++CAD + K +R A+Q IHG + K + N
Sbjct: 243 GVQRWKFLKQKCADHNPNYYDTEKRLRNAKQNFMDTVTTIHGRGGRTLYKLGKKQSSEVN 302
Query: 118 NCS 120
NC
Sbjct: 303 NCG 305
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff8207g051092
(173 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_821910 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.9
XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum] 24 6.4
>M.Javanica_Scaff8207g051092 on XP_821910 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 853
Score = 25.0 bits (53), Expect = 2.9, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 9/67 (13%)
Query: 109 ITPIVYGQNGAYCDADGVGAQSNLLNWP--QIFKNIDYYDEEGDHLGVFNIEYVTQHSLD 166
+ V G +GA +DGV Q WP +N Y H +N V S+D
Sbjct: 548 VNATVKGNDGATKTSDGVTFQGAWAEWPVGSQGQNQLY------HFANYNFTLVATVSID 601
Query: 167 -EPMPDT 172
EP DT
Sbjct: 602 GEPKGDT 608
>M.Javanica_Scaff8207g051092 on XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3346
Score = 23.9 bits (50), Expect = 6.4, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 61 DEGNNQPIKRLGRLSRGQHRE-EFHLTKNTL 90
D+ ++QP K + ++R HR + +TKN++
Sbjct: 752 DKNDSQPTKTVSYIARQMHRRAKAQMTKNSV 782
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4949g037109
(104 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5618g040260
(203 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001347288 PfEMP1 (Establishment) [Plasmodium falciparum] 28 0.42
XP_001351876 PfEMP1 (Establishment) [Plasmodium falciparum] 24 6.3
XP_845636 VSG (Establishment) [Trypanosoma brucei] 24 7.7
XP_828100 VSG (Establishment) [Trypanosoma brucei] 24 7.9
XP_820147 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 8.7
>M.Javanica_Scaff5618g040260 on XP_001347288 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2241
Score = 28.1 bits (61), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 8/82 (9%)
Query: 60 DDETTVATHISTRSNGYPSNNGAPTSTIRPSNNGSSNNGGSSSVTGSVILRDKWVNGANC 119
D+ T+ T IS+ Y SN+G P++++ P S G + S W NG C
Sbjct: 1136 DEMQTIQTAISS----YFSNSGKPSTSVTPVTQPS---GTTPQALWSKYAESIW-NGMVC 1187
Query: 120 ILAFKNNGNARACGVKFELTLG 141
L ++++G+ K E G
Sbjct: 1188 ALTYRDSGDKGGKPQKVEAANG 1209
>M.Javanica_Scaff5618g040260 on XP_001351876 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3164
Score = 24.3 bits (51), Expect = 6.3, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 5/41 (12%)
Query: 22 DAGRYPSGDDLVERTTAARLHSSSDLPDDDEEECECEDDDE 62
+ + PSGD V+ A R D P D ++ C+CE ++
Sbjct: 1186 NGAKPPSGDLEVDNEYAFR-----DKPTDHDKVCDCESGEK 1221
>M.Javanica_Scaff5618g040260 on XP_845636 VSG (Establishment) [Trypanosoma brucei]
Length = 490
Score = 23.9 bits (50), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 9/34 (26%), Positives = 17/34 (50%)
Query: 56 ECEDDDETTVATHISTRSNGYPSNNGAPTSTIRP 89
+CEDD ++ ++ ++ GY NG + P
Sbjct: 275 DCEDDQDSDKKAFVTAKAAGYAICNGRRQTVTEP 308
>M.Javanica_Scaff5618g040260 on XP_828100 VSG (Establishment) [Trypanosoma brucei]
Length = 518
Score = 23.9 bits (50), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 86 TIRPSNNGSSNNGGSSSVTGSVILRDKWVNGANCILAFK 124
T ++NG +++GG + G + W NG ++K
Sbjct: 213 TFTVASNGCTSSGGGTKTIGQAMAGCSWANGDTVSTSYK 251
>M.Javanica_Scaff5618g040260 on XP_820147 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 878
Score = 23.9 bits (50), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 7/51 (13%)
Query: 28 SGDDLVERTTAARLHSSSDLPDDDEEECECEDDDETTVATHISTRSNGYPS 78
SGDD E T ++ L++S DD DD+E +A + + G PS
Sbjct: 405 SGDDDEEITASSLLYNSGTGEDDT-------DDNEKLIALYERQKKEGKPS 448
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff264g004164
(114 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609533 variant erythrocyte surface antigen-1, alpha subun... 23 7.2
>M.Javanica_Scaff264g004164 on XP_001609533 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1162
Score = 22.7 bits (47), Expect = 7.2, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Query: 79 PKEAKD---YDNMVNEAINNLKSDRENTMLAK 107
PKE D Y V EA+ N+K D+ +++ K
Sbjct: 1006 PKEDNDGGKYRGSVGEALINIKGDKGDSVALK 1037
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3044g026808
(351 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ABR92030 MSA-1 (Invasion) [Babesia bovis] 25 6.4
>M.Javanica_Scaff3044g026808 on ABR92030 MSA-1 (Invasion) [Babesia bovis]
Length = 328
Score = 25.0 bits (53), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 10/39 (25%), Positives = 23/39 (58%)
Query: 110 IVENNSIVYVVLYKNHAKYKILTKSQEEDFDKLINLFKN 148
+++NN ++ L+K A L+K+ E+ F+ + + K+
Sbjct: 97 MIKNNPMISSELFKETAAKSFLSKTDEDKFNAIFDSLKS 135
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4710g035963
(313 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff29461g096364
(110 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7172g047031
(136 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_814492 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.13
BAC44837 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 25 1.5
XP_001351435 PfEMP1 (Establishment) [Plasmodium falciparum] 25 1.8
XP_001611146 variant erythrocyte surface antigen-1, beta subuni... 25 2.0
XP_817493 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.8
XP_829766 VSG (Establishment) [Trypanosoma brucei] 24 3.4
XP_817001 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 8.5
>M.Javanica_Scaff7172g047031 on XP_814492 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 923
Score = 28.5 bits (62), Expect = 0.13, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 40/102 (39%), Gaps = 1/102 (0%)
Query: 10 TVLSVYSFRLPIPFGEINFTKTPEGETQFGIGSNVNIGGSGAESNLQFNKKKNGTAQVQT 69
TV + S P +++ + + G G GS I G G + N +V T
Sbjct: 778 TVQQLASETFPDGNADVDVSPSSSGNPTVGEGSADTIQGDGPHTPSVGNTAAAADTKVLT 837
Query: 70 GGGVLVDGKKFGTNSTFGGGKEGLTA-DTDIQAGKHTLHGGV 110
G DG + + G +G TA TD Q G H +G V
Sbjct: 838 AKGEGHDGPALTRDVSVSSGADGETAGGTDGQEGIHPQNGEV 879
>M.Javanica_Scaff7172g047031 on BAC44837 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 1566
Score = 25.4 bits (54), Expect = 1.5, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
Query: 90 KEGLTADTDIQAGKHTLHGGVGKENEFIGDLTNAINDEKNNTKKPK 135
+ GL DI+ GV KE E +G +A K+N +KPK
Sbjct: 1068 ESGLNPTDDIKTTD-----GVVKEQEILGGGESATETSKSNLEKPK 1108
>M.Javanica_Scaff7172g047031 on XP_001351435 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2209
Score = 25.0 bits (53), Expect = 1.8, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Query: 32 PEGETQFGIGSNVNIGGSGAESNLQFNKKKNGTAQVQT 69
P+ + Q+ S+V IGG GAE LQ K+ +T
Sbjct: 1168 PKNDYQY---SSVTIGGEGAEGQLQSTDSKDAARGEKT 1202
>M.Javanica_Scaff7172g047031 on XP_001611146 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 958
Score = 25.0 bits (53), Expect = 2.0, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 6/87 (6%)
Query: 40 IGSNVNIGGSGAESNLQFNKKKNGTAQVQTGGG---VLVDGKKFGTNSTFGGGKEGLTAD 96
IG N GG G L +K++ GGG V+ K+ NS+ GGG T D
Sbjct: 842 IGGNSASGGEGVNKALGIYEKESKLHMASIGGGPDAVVQALTKWNGNSS-GGGCNHSTTD 900
Query: 97 TDIQA--GKHTLHGGVGKENEFIGDLT 121
++ G + GG K ++ L+
Sbjct: 901 GSLKTLFGCSSASGGTNKCCPYLSPLS 927
>M.Javanica_Scaff7172g047031 on XP_817493 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 765
Score = 24.6 bits (52), Expect = 2.8, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 10 TVLSVYSFRLPIPFGEINFTKTPEGETQFGIGSNVNIGGSG 50
TV V+ + P+ GE+ K E + + G G + GSG
Sbjct: 674 TVKDVFLYSRPLSVGELKMIKKVEDKKESGDGDGEDKKGSG 714
>M.Javanica_Scaff7172g047031 on XP_829766 VSG (Establishment) [Trypanosoma brucei]
Length = 490
Score = 24.3 bits (51), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 27/67 (40%)
Query: 33 EGETQFGIGSNVNIGGSGAESNLQFNKKKNGTAQVQTGGGVLVDGKKFGTNSTFGGGKEG 92
+GE + GS+ G+G E+ K G +Q G DGK+ +S K
Sbjct: 409 KGECKAKQGSDTPEAGTGDEATGTTTDKCKGKSQTDCKDGCKWDGKECKDSSILATKKFA 468
Query: 93 LTADTDI 99
L + +
Sbjct: 469 LMVSSSV 475
>M.Javanica_Scaff7172g047031 on XP_817001 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 928
Score = 23.1 bits (48), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 36/96 (37%), Gaps = 1/96 (1%)
Query: 10 TVLSVYSFRLPIPFGEINFTKTPEGETQFGIGSNVNIGGSGAESNLQFNKKKNGTAQVQT 69
TV + S P +++ + + G G GS I G G + N V T
Sbjct: 783 TVQQLASETSPDGNADVDVSPSSSGNPTVGEGSADTIQGDGPHTPSVGNTAAAADTNVLT 842
Query: 70 GGGVLVDGKKFGTNSTFGGGKEGLTA-DTDIQAGKH 104
V DG + + G +G TA TD Q G H
Sbjct: 843 AETVGHDGPALTADMSVSSGADGETAGGTDGQEGIH 878
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff27934g094397
(77 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff28101g094618
(146 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_811406 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 6.6
XP_808639 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 6.7
>M.Javanica_Scaff28101g094618 on XP_811406 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 924
Score = 23.5 bits (49), Expect = 6.6, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 117 GEIFGSRTANDGGNQCLGNSSAPGVISGS 145
GE+ G+ ++ GN GN+S G + GS
Sbjct: 879 GEVKGAALSSSLGNVSQGNNSDAGTVCGS 907
>M.Javanica_Scaff28101g094618 on XP_808639 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 949
Score = 23.5 bits (49), Expect = 6.7, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 117 GEIFGSRTANDGGNQCLGNSSAPGVISGS 145
GE+ + ++ GN GN+S G +SGS
Sbjct: 903 GEVKAAALSSSLGNVSQGNNSDAGTVSGS 931
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3587g029979
(105 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_804388 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.3
XP_819966 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.7
XP_845069 VSG (Establishment) [Trypanosoma brucei] 22 9.4
>M.Javanica_Scaff3587g029979 on XP_804388 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 159
Score = 23.9 bits (50), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 30/83 (36%), Gaps = 13/83 (15%)
Query: 32 ACSQVCSRKKREGGGDEGVKRLNKRDFNGCQFTQMGGLARED----------CSNDGGVV 81
+ +Q S EG + V + DFN T GG +ED + D
Sbjct: 13 SVNQSASGTSSEG--TQSVHGASSSDFNPTVGTGAGGKTQEDEPHKTPAGNVNAADANAP 70
Query: 82 VVRKEGRRKRLANLE-KMREGGD 103
EGR NLE R GG+
Sbjct: 71 TTMGEGREGPAVNLEASARSGGN 93
>M.Javanica_Scaff3587g029979 on XP_819966 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 716
Score = 23.9 bits (50), Expect = 2.7, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 75 SNDGGVVVVRKEGRRKRLANLEKMREGGD 103
S V+ R RR+ + + +MREGG+
Sbjct: 3 SRVAAVMAPRTHNRRRVIGSSGRMREGGE 31
>M.Javanica_Scaff3587g029979 on XP_845069 VSG (Establishment) [Trypanosoma brucei]
Length = 477
Score = 22.3 bits (46), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 46 GDEGVKRLNKRDFNGCQFTQMGGLAR 71
D G++R ++ NGC+ +G A+
Sbjct: 147 ADSGMRRWDQAAANGCEHNVVGNAAQ 172
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7859g049751
(93 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7507g048371
(71 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4944g037081
(305 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_812580 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.4
XP_810614 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.8
XP_813586 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.6
XP_820135 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 3.3
AAF14193 SBP3 (Others) [Babesia bovis] 25 4.5
XP_845638 VSG (Establishment) [Trypanosoma brucei] 25 8.5
>M.Javanica_Scaff4944g037081 on XP_812580 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 213
Score = 26.6 bits (57), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Query: 100 WLDCRRLCTCSVISPTHILSAGHCFGFKGKYSIMAGTVNAIENNTQSLWINIKKVNIFSE 159
W+D R SV + + F F G S+ VN+ E+N Q ++N + + +
Sbjct: 18 WIDGYRCVNASVTKAAKVKNG---FRFTGPGSMATWPVNSREDNRQYSFVNHRFTLVATV 74
Query: 160 DIFGKDLAIAELESPINGYDI 180
I L +A+ +P+ G +
Sbjct: 75 TI----LQVAKGSTPLLGASL 91
>M.Javanica_Scaff4944g037081 on XP_810614 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 728
Score = 26.9 bits (58), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 8/82 (9%)
Query: 100 WLDCRRLCTCSVISPTHILSAGHCFGFKGKYSIMAGTVNAIENNTQSLWIN-----IKKV 154
W+D R SV + + F FKG S+ VN+ E+N Q ++N + V
Sbjct: 499 WIDEYRCVNASVTKAAKVKNG---FKFKGPGSMAKWPVNSREDNRQYGFVNHRFTLVATV 555
Query: 155 NIFSEDIFGKDLAIAELESPIN 176
I L A L++P++
Sbjct: 556 AIHQVAKGSTSLLGAGLDAPVS 577
>M.Javanica_Scaff4944g037081 on XP_813586 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1748
Score = 26.6 bits (57), Expect = 2.6, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 8/82 (9%)
Query: 202 GRIDDGSSPVTLQGANVTVWDNEDPKCDGVLKTEICAFGPGGENTCFGDSGGPLLYKNPE 261
G ++D S+P+T V+ + G + I PG ++ F +S NP
Sbjct: 241 GFLNDASTPITKMTDGTLVFPVQFLTMGGNTASTIMYMNPGQQHWTFANSATHAGCTNPS 300
Query: 262 TNNWEQ---VGITSRGSWLCEF 280
WE + ITS CE+
Sbjct: 301 ILEWEAGKIIMITS-----CEY 317
>M.Javanica_Scaff4944g037081 on XP_820135 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1519
Score = 26.2 bits (56), Expect = 3.3, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 2/90 (2%)
Query: 177 GYDIQPVILSSREISINSSAYIAGWGRIDDGSSPVTLQGANVTVWDNEDPKCDGVLKTEI 236
G+ + V +S R + S + G+ ++D S+P+T V+ + G + I
Sbjct: 217 GFSMNSVSMSIRLPYPHKSGDMIGF--LNDASTPITKMTDGTLVFPVQFLTMGGDTASTI 274
Query: 237 CAFGPGGENTCFGDSGGPLLYKNPETNNWE 266
PG ++ F S NP WE
Sbjct: 275 MYMNPGQQHWTFAKSATHAGCTNPSILEWE 304
>M.Javanica_Scaff4944g037081 on AAF14193 SBP3 (Others) [Babesia bovis]
Length = 1089
Score = 25.4 bits (54), Expect = 4.5, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 252 GGPLLYKNPETNNWEQ-VGITSRGSWLCEFKGF 283
GG L++KNPE N + + I++ G + + GF
Sbjct: 716 GGILIFKNPEFNITDAIIDISTDGQYFLQVLGF 748
>M.Javanica_Scaff4944g037081 on XP_845638 VSG (Establishment) [Trypanosoma brucei]
Length = 510
Score = 24.6 bits (52), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 286 TIRLYCDWIEKITEGKAKC 304
+++ C+W +K TEG+ KC
Sbjct: 421 SLKSECEWNDKATEGEKKC 439
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3492g029447
(60 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349514 PfEMP1 (Establishment) [Plasmodium falciparum] 22 4.5
>M.Javanica_Scaff3492g029447 on XP_001349514 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2120
Score = 21.6 bits (44), Expect = 4.5, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 16 RTSVYTISTAWNSVPSFNLCRWKHT 40
RTS Y+++ NS P N HT
Sbjct: 1960 RTSTYSVAKLTNSDPIHNQLELFHT 1984
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff474g006696
(52 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349219 PfEMP1 (Establishment) [Plasmodium falciparum] 22 2.8
XP_001609449 variant erythrocyte surface antigen-1, beta subuni... 21 4.3
ABA06449 MSA-2a/b T-2 (Invasion) [Babesia bovis] 21 4.4
>M.Javanica_Scaff474g006696 on XP_001349219 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2595
Score = 21.9 bits (45), Expect = 2.8, Method: Composition-based stats.
Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Query: 12 DNAILHSTKSNNN-GSPPKSKRSKLQH 37
DN ++ ++ NN G PPK+ + L H
Sbjct: 1715 DNDTCNNYRNKNNIGCPPKTHHTNLNH 1741
>M.Javanica_Scaff474g006696 on XP_001609449 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 776
Score = 21.2 bits (43), Expect = 4.3, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 23 NNGSPPKSKRSKLQHNSKPLSSSISFVDF 51
N GSPP K +Q S +S+++F
Sbjct: 288 NQGSPPDKKGGFVQELLTDKSKGVSWLEF 316
>M.Javanica_Scaff474g006696 on ABA06449 MSA-2a/b T-2 (Invasion) [Babesia bovis]
Length = 274
Score = 21.2 bits (43), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
Query: 10 AADNAILHSTKSNNNGSPPKSKRSKLQHNSKPLSSSISF 48
AA N S+ N NG P KS + KP SS +F
Sbjct: 225 AAPNTSAESSSGNLNGQPSKSAET-----PKPTGSSFTF 258
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff8265g051321
(162 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAC43441 eIF4A (Others) [Toxoplasma gondii] 24 3.5
XP_829786 VSG (Establishment) [Trypanosoma brucei] 24 5.3
XP_811683 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 9.0
>M.Javanica_Scaff8265g051321 on CAC43441 eIF4A (Others) [Toxoplasma gondii]
Length = 255
Score = 24.3 bits (51), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 10/41 (24%), Positives = 20/41 (48%)
Query: 2 KNILFKYLFLQIFLFNVESSKILVFSPTISRSHMISNARIA 42
K F LQ+ +N+ + ++L+ +PT + I +A
Sbjct: 89 KTATFAIAALQLIDYNINNCQVLILAPTRELAQQIQKVVLA 129
>M.Javanica_Scaff8265g051321 on XP_829786 VSG (Establishment) [Trypanosoma brucei]
Length = 482
Score = 23.9 bits (50), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Query: 81 DSKEYDPSLMARMAFKEVDLT--MDFIVGSIWLTTFNNAC 118
+SKE P L+ + F VD T +D I SI T+N+ C
Sbjct: 172 ESKEIKPKLVEK--FITVDTTKLLDNINPSIITVTYNSGC 209
>M.Javanica_Scaff8265g051321 on XP_811683 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 725
Score = 23.5 bits (49), Expect = 9.0, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 27 SPTISRSHMISNARIADTLASDGHNV 52
+PT+ ++SNA DT D H+V
Sbjct: 491 TPTVGLVGLLSNAASGDTWIDDYHSV 516
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6087g042394
(105 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_803417 VSG (Establishment) [Trypanosoma brucei] 26 0.44
XP_843642 VSG (Establishment) [Trypanosoma brucei] 26 0.51
XP_001351513 PfEMP1 (Establishment) [Plasmodium falciparum] 24 2.9
XP_001349032 PfEMP1 (Establishment) [Plasmodium falciparum] 23 3.3
XP_001351514 PfEMP1 (Establishment) [Plasmodium falciparum] 23 3.4
XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum] 23 5.0
XP_818889 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.2
XP_001609450 variant erythrocyte surface antigen-1, alpha subun... 23 6.5
XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum] 23 7.3
XP_001219207 VSG (Establishment) [Trypanosoma brucei] 22 7.6
>M.Javanica_Scaff6087g042394 on XP_803417 VSG (Establishment) [Trypanosoma brucei]
Length = 540
Score = 26.2 bits (56), Expect = 0.44, Method: Composition-based stats.
Identities = 11/21 (52%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Query: 67 KEECEKICK-GCTPNARGRVC 86
KEECEK+ K GC N + C
Sbjct: 432 KEECEKLAKEGCVFNTEAKKC 452
>M.Javanica_Scaff6087g042394 on XP_843642 VSG (Establishment) [Trypanosoma brucei]
Length = 534
Score = 25.8 bits (55), Expect = 0.51, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Query: 45 DNGECKEFGYGGCKGNENRFPTKEEC 70
D +CK+ GCK +EN+ P ++C
Sbjct: 422 DENKCKDLESQGCKYDENK-PADQKC 446
>M.Javanica_Scaff6087g042394 on XP_001351513 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2152
Score = 23.9 bits (50), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 5/29 (17%)
Query: 69 ECEKICKGCTPNARGRVCRGTGFSNCFGA 97
+CEK T NARG+V G G ++CF A
Sbjct: 361 DCEK-----TVNARGKVRMGKGCTDCFFA 384
>M.Javanica_Scaff6087g042394 on XP_001349032 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2267
Score = 23.5 bits (49), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 5/29 (17%)
Query: 69 ECEKICKGCTPNARGRVCRGTGFSNCFGA 97
+CEK T NARG+V G G ++CF A
Sbjct: 356 DCEK-----TVNARGKVRMGKGCTDCFFA 379
>M.Javanica_Scaff6087g042394 on XP_001351514 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2201
Score = 23.5 bits (49), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 5/29 (17%)
Query: 69 ECEKICKGCTPNARGRVCRGTGFSNCFGA 97
+CEK T NARG+V G G ++CF A
Sbjct: 361 DCEK-----TVNARGKVRMGKGCTDCFFA 384
>M.Javanica_Scaff6087g042394 on XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2858
Score = 23.1 bits (48), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 45 DNGECKEFGYGGC 57
DN ECK++G G C
Sbjct: 2082 DNNECKKYGIGSC 2094
>M.Javanica_Scaff6087g042394 on XP_818889 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 750
Score = 23.1 bits (48), Expect = 5.2, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 6/32 (18%)
Query: 47 GECKEFGYGGCKGNENRFPT------KEECEK 72
+CKE G GG G +R T KEE +K
Sbjct: 26 AQCKEEGKGGATGIASRLLTSTDESSKEELDK 57
>M.Javanica_Scaff6087g042394 on XP_001609450 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1309
Score = 22.7 bits (47), Expect = 6.5, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 8/40 (20%)
Query: 31 LVGPCKAIIPSWWFDNGECKEFGYGGCKGNENRFPTKEEC 70
LVG K I + W +GECK G G N+ TK EC
Sbjct: 119 LVGWSK--IETCWTRSGECKVGGKG------NQHGTKPEC 150
>M.Javanica_Scaff6087g042394 on XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3954
Score = 22.7 bits (47), Expect = 7.3, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 50 KEFGYGGCKGNENRFPTKEECEKICKGCTPNARGRVCRGTGF 91
+E+G CK ++ ++ EK C+G + + C G G+
Sbjct: 1973 EEWGEEFCKKRTDKL---KKLEKECRGVNYSGYNKYCSGDGY 2011
>M.Javanica_Scaff6087g042394 on XP_001219207 VSG (Establishment) [Trypanosoma brucei]
Length = 453
Score = 22.3 bits (46), Expect = 7.6, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 45 DNGECKEFGYGGCKGNENRFPTKEECEKI 73
D+G C + +GG + R P + EK+
Sbjct: 305 DSGACVLYEWGGTQIQTARIPWMQRLEKL 333
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff26453g092369
(146 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_819907 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.13
XP_808179 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.1
XP_821388 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.3
>M.Javanica_Scaff26453g092369 on XP_819907 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 943
Score = 28.9 bits (63), Expect = 0.13, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 6/108 (5%)
Query: 23 PNNAAALFAIQQQMAMAQQQQ-QAMR---RNSNNNGPPMPTTSGGNTLHQQQQIQQQQIP 78
P ++A + A+ ++++++Q+ QA+ R PP P T L Q+Q +Q+ +
Sbjct: 712 PLSSADITALNTKLSISKQKDPQAVTGDARAPEVREPPAPVTVPQTNLGAQEQGEQELLK 771
Query: 79 TSMFAQPFGGQMQIPPGLLAAAASGIDFNVLQQYTALINQASGSSGGA 126
TS A G + L A +SG + +V Q + ++ + + GA
Sbjct: 772 TSKVADSHG--VSTSTVLTATTSSGEEGSVNQLSSGTSSEGTQTVHGA 817
>M.Javanica_Scaff26453g092369 on XP_808179 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 942
Score = 25.0 bits (53), Expect = 2.1, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 18 ISAAPPNNAAALFAIQQQMAMAQQQQQAMRRNSNNNGPPMPTTSG 62
I+A PN A+ +QQ A+ + A + PMPT +G
Sbjct: 716 ITALNPNKASTPILEEQQTAVLDTRLTAASGSVAQQTVPMPTPAG 760
>M.Javanica_Scaff26453g092369 on XP_821388 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 907
Score = 23.9 bits (50), Expect = 5.3, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 26/62 (41%)
Query: 14 SITPISAAPPNNAAALFAIQQQMAMAQQQQQAMRRNSNNNGPPMPTTSGGNTLHQQQQIQ 73
S T +SA +A +Q + + Q + S +G P T G T Q++++
Sbjct: 797 STTAVSAITTPSAGEESVLQVTSGTSPEGTQTVGGGSTADGEPTMETREGGTNGQEEEVN 856
Query: 74 QQ 75
Q
Sbjct: 857 TQ 858
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff826g010306
(188 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_828094 VSG (Establishment) [Trypanosoma brucei] 26 1.9
XP_001612315 variant erythrocyte surface antigen-1, beta subuni... 26 2.0
XP_001610721 variant erythrocyte surface antigen-1, alpha subun... 25 2.9
>M.Javanica_Scaff826g010306 on XP_828094 VSG (Establishment) [Trypanosoma brucei]
Length = 483
Score = 25.8 bits (55), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
Query: 95 GYYDQKY----QHFGFGGPKKEENIVKENEKLNGNKEKETEEFEKVEEGNEEDNEEDRLF 150
G DQ H+G GG K N + KLN E EE EK + E+ +E R+
Sbjct: 318 GTTDQTCVDYTAHYGAGGTKSGVNSIPWIVKLNDAIE-TMEEMEKNAQKAREEAKEIRML 376
Query: 151 TRIA 154
A
Sbjct: 377 IAAA 380
>M.Javanica_Scaff826g010306 on XP_001612315 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1140
Score = 25.8 bits (55), Expect = 2.0, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 10/56 (17%)
Query: 104 FGFGGPKKEENIVKENEKLNGNKEKETEEFEKVEEGNEEDNEEDRLFTRIANWFKQ 159
FG+G N+ + ++ GN +K+ EF EG ++ E FT++ N Q
Sbjct: 1022 FGYG------NVTELHKTQVGNAQKKCHEFLSTLEGVKDSGE----FTKLTNSINQ 1067
>M.Javanica_Scaff826g010306 on XP_001610721 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1331
Score = 25.4 bits (54), Expect = 2.9, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 13/72 (18%)
Query: 101 YQH-FGFGGP------------KKEENIVKENEKLNGNKEKETEEFEKVEEGNEEDNEED 147
Y+H F +G P K + +I + ++K + + E EKV E +ED +D
Sbjct: 1183 YRHGFSYGNPFNLEGYQQRDKDKGDYSITERSDKTTKHCHEFLESLEKVLEDKQEDTSQD 1242
Query: 148 RLFTRIANWFKQ 159
T + + Q
Sbjct: 1243 HPLTNLLSQVGQ 1254
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7673g049015
(79 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349219 PfEMP1 (Establishment) [Plasmodium falciparum] 25 0.37
XP_654447 Igl1 (Adhesin) [Entamoeba histolytica] 25 0.41
XP_652394 Igl2 (Adhesin) [Entamoeba histolytica] 25 0.48
XP_829761 VSG (Establishment) [Trypanosoma brucei] 23 2.2
XP_811004 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.3
XP_808836 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 8.0
XP_001350936 PfEMP1 (Establishment) [Plasmodium falciparum] 22 9.2
>M.Javanica_Scaff7673g049015 on XP_001349219 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2595
Score = 25.4 bits (54), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Query: 7 DGPTDAAG-AFICSDDLLNKSTEQLSSLSTKVKSALKEKRSYQFW 50
DG + +G C D+LLNK + L S + +S E R Y+ W
Sbjct: 1270 DGSKNCSGYGEDCKDNLLNKPYDTLPSFN--CRSCGIECRKYKNW 1312
>M.Javanica_Scaff7673g049015 on XP_654447 Igl1 (Adhesin) [Entamoeba histolytica]
Length = 1101
Score = 25.4 bits (54), Expect = 0.41, Method: Composition-based stats.
Identities = 9/16 (56%), Positives = 10/16 (62%)
Query: 6 TDGPTDAAGAFICSDD 21
TDGP G +CSDD
Sbjct: 376 TDGPCKLPGCLLCSDD 391
>M.Javanica_Scaff7673g049015 on XP_652394 Igl2 (Adhesin) [Entamoeba histolytica]
Length = 1105
Score = 25.0 bits (53), Expect = 0.48, Method: Composition-based stats.
Identities = 9/16 (56%), Positives = 10/16 (62%)
Query: 6 TDGPTDAAGAFICSDD 21
TDGP G +CSDD
Sbjct: 376 TDGPCKLPGCLLCSDD 391
>M.Javanica_Scaff7673g049015 on XP_829761 VSG (Establishment) [Trypanosoma brucei]
Length = 477
Score = 23.1 bits (48), Expect = 2.2, Method: Composition-based stats.
Identities = 11/17 (64%), Positives = 13/17 (76%)
Query: 24 NKSTEQLSSLSTKVKSA 40
NKSTEQL++LST A
Sbjct: 287 NKSTEQLATLSTLASRA 303
>M.Javanica_Scaff7673g049015 on XP_811004 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 933
Score = 22.3 bits (46), Expect = 5.3, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 8 GPTDAAGAFICSDDLLNKSTEQLSSLSTKVKSALKEKR 45
GP G + + LL+KS E ++ K AL EK+
Sbjct: 402 GPVSGEGEDVAASALLHKSVEGETNEEKKELIALYEKK 439
>M.Javanica_Scaff7673g049015 on XP_808836 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 376
Score = 21.6 bits (44), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Query: 16 FICSDDLLNKSTEQLSSLSTKVKSALKEKRSYQFWSEFNEGRNI 59
+C D +T +S ++S+ K +Y FW + NEG +
Sbjct: 55 MMCCDTGGATATNNGTSRRASLRSSPK---TYFFWRDKNEGETV 95
>M.Javanica_Scaff7673g049015 on XP_001350936 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2163
Score = 21.6 bits (44), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 6/11 (54%), Positives = 9/11 (81%)
Query: 50 WSEFNEGRNIV 60
W EF EG+N++
Sbjct: 587 WKEFKEGKNVM 597
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2912g026027
(456 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_845138 VSG (Establishment) [Trypanosoma brucei] 30 0.32
ABA06441 MSA-2a/b (Invasion) [Babesia bovis] 30 0.35
CAD21872 ESAG-6 (Establishment) [Trypanosoma brucei] 26 3.9
ABA06448 MSA-2a/b T-1 (Invasion) [Babesia bovis] 26 4.9
CAD21456 ESAG-7 (Establishment) [Trypanosoma brucei] 25 7.3
CAD21778 ESAG-7 (Establishment) [Trypanosoma brucei] 25 8.0
CAD21779 ESAG-7 (Establishment) [Trypanosoma brucei] 25 8.0
>M.Javanica_Scaff2912g026027 on XP_845138 VSG (Establishment) [Trypanosoma brucei]
Length = 485
Score = 30.0 bits (66), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 13/55 (23%)
Query: 261 GPYKTTKLCGIGDAPLCYGVDPN--------RNFPYHWAETGTDPCPCSEVYPGP 307
G K TKL I + PL ++ N RN P T D C CS P P
Sbjct: 346 GVTKGTKLAEISNLPLLTELETNYTINKAIQRNIP-----TAADACNCSSAQPTP 395
>M.Javanica_Scaff2912g026027 on ABA06441 MSA-2a/b (Invasion) [Babesia bovis]
Length = 278
Score = 29.6 bits (65), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 45 ELKNITRSINMLKSEENNIQIWKVHSQPGMPAE-IFSGPESERKLLDFFDDKKIVYSTLI 103
E+K I I L ++EN + + + MP+E + ++LDFF D K+ + T +
Sbjct: 36 EMKQIANYIKFLTNDENKESLEEKFKEVNMPSENSLDALSAFVQILDFFKD-KVPFKTPL 94
Query: 104 EDFGLQMRVSGETLRYELLDEWDEELITSI 133
D G+ + L+Y+ DE + L+ +
Sbjct: 95 FDNGVY-----DNLKYQDTDEIFKSLLLRV 119
>M.Javanica_Scaff2912g026027 on CAD21872 ESAG-6 (Establishment) [Trypanosoma brucei]
Length = 400
Score = 26.2 bits (56), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 11/68 (16%)
Query: 387 ILYEAAGGSDDYATSLGVKYSYTMELTSGRYDNL---FGGFIFPERGIKKEAAKVLPGIY 443
+ +AAGGS + S+G Y+NL F G I PE K E ++V
Sbjct: 133 VFAQAAGGSSQFCISVGTN-------IPAEYNNLQECFDGIIGPETLYKIEDSRVKESA- 184
Query: 444 QLALQVYK 451
Q +LQ+++
Sbjct: 185 QKSLQLHE 192
>M.Javanica_Scaff2912g026027 on ABA06448 MSA-2a/b T-1 (Invasion) [Babesia bovis]
Length = 284
Score = 25.8 bits (55), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 45 ELKNITRSINMLKSEENNIQIWKVHSQPGMPAE-IFSGPESERKLLDFFDDKKIVYSTLI 103
E+K++ I L EEN + + MP+E + ++LDFF DK ++L
Sbjct: 36 EMKDVANYIKFLTKEENKDYLEGKFKEVDMPSENSLDALSAFVQILDFFKDKVPFKTSLF 95
Query: 104 ED 105
++
Sbjct: 96 DE 97
>M.Javanica_Scaff2912g026027 on CAD21456 ESAG-7 (Establishment) [Trypanosoma brucei]
Length = 338
Score = 25.4 bits (54), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 11/68 (16%)
Query: 387 ILYEAAGGSDDYATSLGVKYSYTMELTSGRYDNL---FGGFIFPERGIKKEAAKVLPGIY 443
+ +AAGGS + S+G Y+NL F G I PE K E ++V
Sbjct: 132 VFAQAAGGSSQFCISVGTN-------IPAEYNNLQECFDGTIGPETLYKIEDSRVKESA- 183
Query: 444 QLALQVYK 451
Q +LQ+++
Sbjct: 184 QKSLQLHE 191
>M.Javanica_Scaff2912g026027 on CAD21778 ESAG-7 (Establishment) [Trypanosoma brucei]
Length = 340
Score = 25.4 bits (54), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 387 ILYEAAGGSDDYATSLGVKYSYTMELTSGRYDNLFGGFIFPERGIKKEAAKVLPGIYQLA 446
+ +AAGGS + S+G + G F G I PE K E ++V Q +
Sbjct: 134 VFAQAAGGSSQFCISVG----KHIPAEHGNLQECFDGIIGPETLYKIEDSRVKESA-QKS 188
Query: 447 LQVYK 451
LQ+++
Sbjct: 189 LQLHE 193
>M.Javanica_Scaff2912g026027 on CAD21779 ESAG-7 (Establishment) [Trypanosoma brucei]
Length = 340
Score = 25.4 bits (54), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 387 ILYEAAGGSDDYATSLGVKYSYTMELTSGRYDNLFGGFIFPERGIKKEAAKVLPGIYQLA 446
+ +AAGGS + S+G + G F G I PE K E ++V Q +
Sbjct: 134 VFAQAAGGSSQFCISVG----KHIPAEHGNLQECFDGIIGPETLYKIEDSRVKESA-QKS 188
Query: 447 LQVYK 451
LQ+++
Sbjct: 189 LQLHE 193
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3338g028577
(521 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351876 PfEMP1 (Establishment) [Plasmodium falciparum] 28 1.7
BAD34969 Rab7B (Establishment) [Entamoeba histolytica] 25 7.9
>M.Javanica_Scaff3338g028577 on XP_001351876 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3164
Score = 28.1 bits (61), Expect = 1.7, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 11/62 (17%)
Query: 199 YDHLLELFQNPNQQHFEPEVSSVGEWILSWPFVISANLHEGDMVANYPFDESREPMSLSA 258
YDH+ Q + E V SV E+ LHE NY FDE+ ++ +
Sbjct: 2820 YDHVENFVQKLKKYKNECSVESVSEY-----------LHETSKCLNYKFDENDGSSNIRS 2868
Query: 259 YS 260
Y+
Sbjct: 2869 YA 2870
>M.Javanica_Scaff3338g028577 on BAD34969 Rab7B (Establishment) [Entamoeba histolytica]
Length = 207
Score = 25.4 bits (54), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Query: 284 KNDHEPCDGTAQNNFARQGGITNGAKWYSVAGGMQDFNYLATNAFEITLELGC---EKMP 340
KND EP + ++ RQ +TNG +++ + + +AF L +++P
Sbjct: 128 KNDCEPANRAVSSDQLRQWCVTNGYEFFECSAKT---GWNVDSAFTKAATLVAMRQKEVP 184
Query: 341 NPQQLPQFWAD 351
P+ LP D
Sbjct: 185 QPEPLPSVQID 195
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff8352g051636
(218 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351513 PfEMP1 (Establishment) [Plasmodium falciparum] 27 0.82
XP_001351514 PfEMP1 (Establishment) [Plasmodium falciparum] 27 1.1
XP_001351435 PfEMP1 (Establishment) [Plasmodium falciparum] 26 2.7
XP_001349030 PfEMP1 (Establishment) [Plasmodium falciparum] 25 3.4
XP_001350936 PfEMP1 (Establishment) [Plasmodium falciparum] 25 3.7
XP_001352170 MSP1 (Invasion) [Plasmodium falciparum] 25 4.1
XP_001349036 PfEMP1 (Establishment) [Plasmodium falciparum] 25 4.2
XP_001351561 PfEMP1 (Establishment) [Plasmodium falciparum] 25 4.2
XP_001348946 PfEMP1 (Establishment) [Plasmodium falciparum] 25 4.2
XP_001349434 PfEMP1 (Establishment) [Plasmodium falciparum] 25 4.8
XP_812620 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 7.3
XP_803326 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 7.5
CAD21778 ESAG-7 (Establishment) [Trypanosoma brucei] 24 9.3
CAD21779 ESAG-7 (Establishment) [Trypanosoma brucei] 24 9.3
XP_001347691 PfEMP1 (Establishment) [Plasmodium falciparum] 24 9.9
>M.Javanica_Scaff8352g051636 on XP_001351513 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2152
Score = 27.3 bits (59), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 12/105 (11%)
Query: 56 LMHRAVIIDSNSEIPDNESSVSLKDNKG---FGGDTINNAETEMVNNTNGGGNSTRKRKM 112
++H V D+ + + E +SL G + D ++++N + GG + R
Sbjct: 31 IVHEQVKNDAKTYKGELEGKLSLATTIGELNYTKDPCIFDYSKLINGSGSGGVTARDD-- 88
Query: 113 PSKKENGGG-------DEQGGSCNNGNVNSNSRRSGGGGRDNKRR 150
P +G G D++G C N ++ NS+ S GG RR
Sbjct: 89 PCGNGSGKGEDVSRFSDKEGAQCANSKIHGNSKGSNGGACAPLRR 133
>M.Javanica_Scaff8352g051636 on XP_001351514 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2201
Score = 26.9 bits (58), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 12/105 (11%)
Query: 56 LMHRAVIIDSNSEIPDNESSVSLKDNKG---FGGDTINNAETEMVNNTNGGGNSTRKRKM 112
++H V D+ + + E +SL G + D ++++N + GG + R
Sbjct: 31 IVHEQVKNDAKTYKGELEGKLSLATTIGELNYTKDPCIFDYSKLINGSGSGGVTARDD-- 88
Query: 113 PSKKENGGG-------DEQGGSCNNGNVNSNSRRSGGGGRDNKRR 150
P +G G D++G C N ++ NS+ S GG RR
Sbjct: 89 PCGNGSGKGEDVSRFSDKEGAQCANSKIHGNSKGSNGGACAPLRR 133
>M.Javanica_Scaff8352g051636 on XP_001351435 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2209
Score = 25.8 bits (55), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 9/13 (69%), Positives = 12/13 (92%)
Query: 39 KEINHLKQLKRVL 51
KEI HLKQ+K++L
Sbjct: 761 KEIQHLKQIKKIL 773
>M.Javanica_Scaff8352g051636 on XP_001349030 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 25.4 bits (54), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 10/65 (15%)
Query: 88 TINNAETEMVNNTNGGGNSTR--KRKMPSKKENGGGD------EQGGSCNNGNVNSNSRR 139
TI + ET ++ +TR R P KK+ G D +QG C N ++ NS+
Sbjct: 50 TIFDTETTGTDDPCSSDYTTRFDARGDPCKKDGTGNDVERFSVKQGAECGNSKIHGNSK- 108
Query: 140 SGGGG 144
GG G
Sbjct: 109 -GGTG 112
>M.Javanica_Scaff8352g051636 on XP_001350936 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2163
Score = 25.4 bits (54), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
Query: 93 ETEMVNNTNGGGNSTRK--RKMPSKKENGGGDEQGGSCNNGNVNSNSRRSG 141
E E +TNGGG R ++ K E D GG C N + N G
Sbjct: 71 EYEYYKHTNGGGKGKRYPCTELGEKVEPRFSDTLGGQCTNKKIEGNKYIKG 121
>M.Javanica_Scaff8352g051636 on XP_001352170 MSP1 (Invasion) [Plasmodium falciparum]
Length = 1720
Score = 25.0 bits (53), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 11/52 (21%)
Query: 7 DLYETKYNNLLEYYCHMEQMNNRLKHRLY-----------HVRKEINHLKQL 47
DL NN+ Y + MNN L+H + H KE NH+K+L
Sbjct: 849 DLLFNIQNNIPAMYSLYDSMNNDLQHLFFELYQKEMIYYLHKLKEENHIKKL 900
>M.Javanica_Scaff8352g051636 on XP_001349036 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2192
Score = 25.0 bits (53), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 14/25 (56%)
Query: 122 DEQGGSCNNGNVNSNSRRSGGGGRD 146
D QGG N NV S+S GGG D
Sbjct: 469 DTQGGKINFKNVKSSSASVPGGGND 493
>M.Javanica_Scaff8352g051636 on XP_001351561 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3553
Score = 25.0 bits (53), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 7/30 (23%), Positives = 19/30 (63%)
Query: 22 HMEQMNNRLKHRLYHVRKEINHLKQLKRVL 51
+ +++NN + +HV KE+N ++ +++
Sbjct: 653 YYKKLNNHFQGYFFHVMKELNKEEKWYKLM 682
>M.Javanica_Scaff8352g051636 on XP_001348946 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3553
Score = 25.0 bits (53), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 7/30 (23%), Positives = 19/30 (63%)
Query: 22 HMEQMNNRLKHRLYHVRKEINHLKQLKRVL 51
+ +++NN + +HV KE+N ++ +++
Sbjct: 653 YYKKLNNHFQGYFFHVMKELNKEEKWYKLM 682
>M.Javanica_Scaff8352g051636 on XP_001349434 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2109
Score = 25.0 bits (53), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 7/54 (12%)
Query: 98 NNTNGGGNSTRKRKMPSK--KENGGGDEQGGSCNNGNVNSNSRRSGGGGRDNKR 149
N T GGG R+ P K E DE GG C + + N GG +R
Sbjct: 72 NVTIGGG-----REYPCKDRPEVRFSDEYGGQCTDSKIKGNEDNKGGACAPFRR 120
>M.Javanica_Scaff8352g051636 on XP_812620 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1042
Score = 24.3 bits (51), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 12/55 (21%)
Query: 174 SEDSVKSEATTNEAENAQQELSDV----PTP--------TEQNSGSCSNQNIEEN 216
SED +AT NE + Q+ SDV P P E +SGS + + EE+
Sbjct: 798 SEDKTSQQATMNEGNKSMQQDSDVQTQDPQPAELTGVTNVEMSSGSYAEEQPEED 852
>M.Javanica_Scaff8352g051636 on XP_803326 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 515
Score = 24.3 bits (51), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 13/78 (16%)
Query: 111 KMPSKKENGGG---------DEQGGSCNNGNVNSNSRRSGGGGRDNKRRKARDEAKQNII 161
++PS E GG E+ G+C + + S +GGGG +K A D A +++
Sbjct: 104 RVPSLAEVAGGVFAVAEAQCSERDGACGHAAIASTHIETGGGG--SKAISAMD-AGVSLV 160
Query: 162 SIIESIVSDTPKSEDSVK 179
++++ S T ++++ ++
Sbjct: 161 ELVDA-ASGTTRAQEKMQ 177
>M.Javanica_Scaff8352g051636 on CAD21778 ESAG-7 (Establishment) [Trypanosoma brucei]
Length = 340
Score = 23.9 bits (50), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 17/73 (23%), Positives = 32/73 (43%)
Query: 119 GGGDEQGGSCNNGNVNSNSRRSGGGGRDNKRRKARDEAKQNIISIIESIVSDTPKSEDSV 178
GGG GSC GN+ G + R D +K +I + + + +++++V
Sbjct: 240 GGGVMNFGSCVAGNLKIKGGEYGDVSSHDVVRWTEDPSKVSIFKDVIRLFARFQEAKNAV 299
Query: 179 KSEATTNEAENAQ 191
++ T E A+
Sbjct: 300 MNKIKTTVDELAK 312
>M.Javanica_Scaff8352g051636 on CAD21779 ESAG-7 (Establishment) [Trypanosoma brucei]
Length = 340
Score = 23.9 bits (50), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 17/73 (23%), Positives = 32/73 (43%)
Query: 119 GGGDEQGGSCNNGNVNSNSRRSGGGGRDNKRRKARDEAKQNIISIIESIVSDTPKSEDSV 178
GGG GSC GN+ G + R D +K +I + + + +++++V
Sbjct: 240 GGGVMNFGSCVAGNLKIKGGEYGDVSSHDVVRWTEDPSKVSIFKDVIRLFARFQEAKNAV 299
Query: 179 KSEATTNEAENAQ 191
++ T E A+
Sbjct: 300 MNKIKTTVDELAK 312
>M.Javanica_Scaff8352g051636 on XP_001347691 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2182
Score = 23.9 bits (50), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 5/53 (9%)
Query: 97 VNNTNGGGNSTRKRKMPSKKENGGGDEQGGSCNNGNVNSNSRRSGGGGRDNKR 149
N TNG R + KE D GG C + + N R +GG +R
Sbjct: 76 TNATNGTSYPCR-----AGKEERFSDTLGGQCTDQQIEGNDRNNGGACAPYRR 123
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3237g027980
(75 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351876 PfEMP1 (Establishment) [Plasmodium falciparum] 23 1.9
>M.Javanica_Scaff3237g027980 on XP_001351876 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3164
Score = 23.5 bits (49), Expect = 1.9, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 6/28 (21%)
Query: 42 QYCREILGNLLLTESIE------NYPSK 63
Q C ++LGN+L+ E NYP K
Sbjct: 155 QNCDDLLGNILVAAKYEGQSIVNNYPDK 182
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6457g044024
(95 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349533 PfEMP3 (Establishment) [Plasmodium falciparum] 22 7.5
XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum] 22 8.5
>M.Javanica_Scaff6457g044024 on XP_001349533 PfEMP3 (Establishment) [Plasmodium falciparum]
Length = 2441
Score = 22.3 bits (46), Expect = 7.5, Method: Composition-based stats.
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 57 KSKDVDKDDKNVIFKK 72
K+K DKDDK ++ KK
Sbjct: 190 KNKGNDKDDKKIVPKK 205
>M.Javanica_Scaff6457g044024 on XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2858
Score = 22.3 bits (46), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 18 FWTKQRTSTRTWNINQDVRFAV 39
FW+K++ S +IN RF +
Sbjct: 1694 FWSKKKPSIEECDINAKERFQI 1715
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5385g039225
(269 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_821388 Trans-sialidase (Invasion) [Trypanosoma cruzi] 32 0.033
XP_810574 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.62
XP_804330 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.1
XP_812720 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.5
XP_808394 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.3
XP_811703 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.6
XP_820184 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.7
XP_815749 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 3.2
XP_804902 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 3.7
XP_806519 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.2
XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum] 25 4.3
XP_812697 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.9
XP_808758 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 5.0
XP_815479 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 7.3
XP_816523 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 7.4
XP_821526 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 7.7
XP_829789 VSG (Establishment) [Trypanosoma brucei] 24 8.4
XP_805548 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 9.4
>M.Javanica_Scaff5385g039225 on XP_821388 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 907
Score = 32.0 bits (71), Expect = 0.033, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 9/67 (13%)
Query: 60 TTTTISTITPPTTAQ------TNATTPENTTVLTTGSST-AEQTNKTNDQQTCGTCEHIN 112
+TT +S IT P+ + T+ T+PE T + GS+ E T +T + T G E +N
Sbjct: 797 STTAVSAITTPSAGEESVLQVTSGTSPEGTQTVGGGSTADGEPTMETREGGTNGQEEEVN 856
Query: 113 C--GDIN 117
G++N
Sbjct: 857 TQLGEVN 863
>M.Javanica_Scaff5385g039225 on XP_810574 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 954
Score = 28.1 bits (61), Expect = 0.62, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 33/92 (35%), Gaps = 3/92 (3%)
Query: 61 TTTISTITPPTTAQTNATTPENTTVLTTGSSTAEQTNKTNDQQTCGTCEHINCGDINLNC 120
TTT + P TT+ T P + T G EQ G LN
Sbjct: 739 TTTSPPVEPLTTSVTTEMQPTVPSPATAGPQPTEQATLNGSSVPSGGAPST---PEELNA 795
Query: 121 RTNKQTIQAINTTTAEHTNASTAEITNLTAEQ 152
T+ T+T E NA+T+ TA+Q
Sbjct: 796 ATSTPEELNAATSTPEELNAATSSAREGTADQ 827
>M.Javanica_Scaff5385g039225 on XP_804330 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 910
Score = 27.3 bits (59), Expect = 1.1, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 35/92 (38%), Gaps = 13/92 (14%)
Query: 61 TTTISTITPPTTAQTNATTPENTTVLTTGSSTAEQTNKTNDQQTCGTCEHINCGDINLNC 120
TTT S++ P TT+ T T P + G EQ G
Sbjct: 706 TTTSSSVEPLTTSVTTETQPTVPSPTPAGPQPTEQATLNGSSVPSG------------GA 753
Query: 121 RTNKQTIQAINTTTAEHTNASTAEITNLTAEQ 152
+ + + A +T AE NA+T+ TA+Q
Sbjct: 754 PSTPEELNAATSTPAE-LNAATSSAREGTADQ 784
>M.Javanica_Scaff5385g039225 on XP_812720 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1041
Score = 26.9 bits (58), Expect = 1.5, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 17/77 (22%)
Query: 26 LSIDGSRNLNNSSDIEPNVNLTWTKISLTE-------------TTIQTTTTISTITPPTT 72
+S DGS +++SD EP +S TE T+ T + TP T
Sbjct: 924 MSSDGSLT-SSTSDAEPTSAEKTDDVSWTEGAEFSFEDGKEAPKTVDTAQGNTNTTPGET 982
Query: 73 ---AQTNATTPENTTVL 86
+++NATTP +T +L
Sbjct: 983 KIPSESNATTPSDTDIL 999
>M.Javanica_Scaff5385g039225 on XP_808394 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 912
Score = 26.2 bits (56), Expect = 2.3, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 55 ETTIQTTTTISTITPPTTAQTNATTPENTTV 85
+ T+ ++ S TP TTA++++ PE T+
Sbjct: 737 QATLNASSVPSGSTPSTTAESSSAEPEQATL 767
>M.Javanica_Scaff5385g039225 on XP_811703 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1043
Score = 26.2 bits (56), Expect = 2.6, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 16/67 (23%)
Query: 36 NSSDIEPNV-----NLTWTK---ISLTE-----TTIQTTTTISTITPPTT---AQTNATT 79
+ SD EP N++WT+ S+ + T+ T ++ TP T +++NATT
Sbjct: 935 SKSDAEPRSAEDTDNISWTEGAEFSVEDGKEVPQTVDTAPGNTSTTPGETKIPSESNATT 994
Query: 80 PENTTVL 86
P +T +L
Sbjct: 995 PSDTDIL 1001
>M.Javanica_Scaff5385g039225 on XP_820184 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1050
Score = 26.2 bits (56), Expect = 2.7, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 16/75 (21%)
Query: 36 NSSDIEPNVNLTWTKISLTE-------------TTIQTTTTISTITPPTT---AQTNATT 79
+ SD EP IS TE T++T + + TP T +++NATT
Sbjct: 942 SKSDAEPTSAEDTDNISRTEEAEFLVENGEEAPQTVETASGNTNTTPGETEIPSESNATT 1001
Query: 80 PENTTVLTTGSSTAE 94
P +T +L E
Sbjct: 1002 PSDTDILLENGHLGE 1016
>M.Javanica_Scaff5385g039225 on XP_815749 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1053
Score = 25.8 bits (55), Expect = 3.2, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 57 TIQTTTTISTITPPTTA---QTNATTPENTTVLTTGSSTAE 94
T++T + TP TA ++NATTP +T +L +E
Sbjct: 980 TVETAPGNTNTTPGETAIPSESNATTPSDTEILLENGHYSE 1020
>M.Javanica_Scaff5385g039225 on XP_804902 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1042
Score = 25.8 bits (55), Expect = 3.7, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 16/75 (21%)
Query: 36 NSSDIEPNV-----NLTWTK---ISLTE-----TTIQTTTTISTITPPTT---AQTNATT 79
+ SD EP N++WT+ S+ + T+ T ++ TP T +++NATT
Sbjct: 934 SKSDAEPTSAEDTDNISWTERAEFSVEDGKEVPQTVDTAPGNTSTTPGETKIPSESNATT 993
Query: 80 PENTTVLTTGSSTAE 94
P +T +L E
Sbjct: 994 PSDTDILLENGHLGE 1008
>M.Javanica_Scaff5385g039225 on XP_806519 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 912
Score = 25.4 bits (54), Expect = 4.2, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 55 ETTIQTTTTISTITPPTTAQTNATTPENTTV 85
+ T+ ++ S TP TTA++ PE T+
Sbjct: 737 QATVNASSVPSGSTPSTTAESRPAEPEQATL 767
>M.Javanica_Scaff5385g039225 on XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3954
Score = 25.4 bits (54), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 161 TTPKSPIAE--LAKSIYAGVPLICIPDGGDQFYLSSL 195
++P +P+A L+ S AG CIP Q Y+ L
Sbjct: 1739 SSPPAPVASSTLSTSPEAGASATCIPPRRQQMYIQPL 1775
>M.Javanica_Scaff5385g039225 on XP_812697 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 911
Score = 25.4 bits (54), Expect = 4.9, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 35/85 (41%), Gaps = 2/85 (2%)
Query: 58 IQTTTTISTITPPTTAQTNATTPENTTVLTTGSSTAEQTNKTNDQQTCGTCEHINCGDIN 117
+ T +T S + T+P+ T + GS+ + + T G E I+ D +
Sbjct: 806 VSTVSTSSAEEESVVQSASGTSPDGTQTVGGGSTAVGEPTMETREGTNGQEEQIHPQDKD 865
Query: 118 LNCRTNKQTIQAINTTTAEHTNAST 142
+N ++ +N + + +A T
Sbjct: 866 VNATALSSSL--VNVSQGNNRDAGT 888
>M.Javanica_Scaff5385g039225 on XP_808758 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 823
Score = 25.0 bits (53), Expect = 5.0, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 35/89 (39%), Gaps = 1/89 (1%)
Query: 41 EPNVNLTWTKISLTETTIQTTTTISTITPPTTAQTNATTPENTTVLTTGSSTAEQTNKTN 100
+P +T T +S+ + ++ T + + ++ T P N + G+ ++N T
Sbjct: 716 QPTGQVTGTGLSVASES-KSEETTAPLVENGDSEDVGTAPVNASTTPGGTKIPSKSNATT 774
Query: 101 DQQTCGTCEHINCGDINLNCRTNKQTIQA 129
T EH GD+ T T+
Sbjct: 775 PSDTGILLEHGQFGDLPAISLTGDSTVHG 803
>M.Javanica_Scaff5385g039225 on XP_815479 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1047
Score = 24.6 bits (52), Expect = 7.3, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 30/81 (37%), Gaps = 5/81 (6%)
Query: 36 NSSDIEPNVNLTWTKISLTETTIQTTTTISTITPPTTAQTNATTPENTTVLTTGSSTAEQ 95
+ SD EP IS TE ++ + + QT T P NT + +
Sbjct: 939 SKSDAEPTSAEDTDNISRTEGEESSSEDVKEV-----PQTVDTAPGNTNTTPGETMIPSE 993
Query: 96 TNKTNDQQTCGTCEHINCGDI 116
+N T T EH GD+
Sbjct: 994 SNATTPSDTDVLLEHGKFGDL 1014
>M.Javanica_Scaff5385g039225 on XP_816523 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 892
Score = 24.6 bits (52), Expect = 7.4, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 63/147 (42%), Gaps = 9/147 (6%)
Query: 31 SRNLNNSSDIEPNVNLTWTKISLTETTIQTTTTISTITPPTTAQTNATTPENTTVLTTGS 90
S +++S+ P+ + + S TT+ ++ + TP T ++A + +TTV ++
Sbjct: 690 STPVDSSAHGTPSTPVDSSAHSTPSTTVDSS---AHSTPSTPVDSSAHSTPSTTVDSSAH 746
Query: 91 STAEQTNKTNDQQTCGTCEHINCGDINLNCRTNKQTIQAINTTTAEHTNASTAEITNLTA 150
ST T ++ T T ++ + T + + +T A+ + ST ++
Sbjct: 747 STPSTTVDSSAHSTPST--PVDSSAHSTPSTTADSSAHSTPSTPADSSAHSTPSTPVDSS 804
Query: 151 EQTNKTGPEI----TTPKSPIAELAKS 173
+ + P +TP +P+ A S
Sbjct: 805 AHSTPSTPADSSAHSTPSTPVDSSAHS 831
>M.Javanica_Scaff5385g039225 on XP_821526 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 983
Score = 24.6 bits (52), Expect = 7.7, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 28/70 (40%), Gaps = 6/70 (8%)
Query: 29 DGSRNLNNSSDIEPNVNLTWTKISLTETTIQTTTTISTITPPTTAQTNATTPENTTVLTT 88
D SRN+ + ++ +++ +T + T ++ T P TA N T
Sbjct: 863 DSSRNVTTNDSMQHSIDRE------EDTDVLTAVGTNSSTDPATAHRNDNVSGGANAAPT 916
Query: 89 GSSTAEQTNK 98
SSTA K
Sbjct: 917 HSSTAPVETK 926
>M.Javanica_Scaff5385g039225 on XP_829789 VSG (Establishment) [Trypanosoma brucei]
Length = 526
Score = 24.3 bits (51), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Query: 70 PTTAQTNATTPEN--TTVLTTG--SSTAEQTNKTNDQQTC 105
P TA T TT E T TG TA + +KT D+Q C
Sbjct: 444 PETAGTEGTTKEGGTTAAWCTGHKDKTACENDKTGDKQNC 483
>M.Javanica_Scaff5385g039225 on XP_805548 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1044
Score = 24.3 bits (51), Expect = 9.4, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 57 TIQTTTTISTITPPTT---AQTNATTPENTTVLTTGSSTAE 94
T++T + ++ P T +++NATTP +T +L E
Sbjct: 970 TVETASGKTSTAPGETEIPSESNATTPSDTEILLDNGHLGE 1010
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5691g040587
(89 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_805196 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.0
XP_805195 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.0
XP_804171 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.0
>M.Javanica_Scaff5691g040587 on XP_805196 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 731
Score = 23.1 bits (48), Expect = 3.0, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 16 SLLNIKCDGRKVSIEVKIEDDWKEKRE 42
+L+ + +GRKV + + + WK +RE
Sbjct: 358 ALITVTIEGRKVMLYTQRGNFWKGQRE 384
>M.Javanica_Scaff5691g040587 on XP_805195 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 769
Score = 23.1 bits (48), Expect = 3.0, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 16 SLLNIKCDGRKVSIEVKIEDDWKEKRE 42
+L+ + +GRKV + + + WK +RE
Sbjct: 396 ALITVTIEGRKVMLYTQRGNFWKGQRE 422
>M.Javanica_Scaff5691g040587 on XP_804171 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 787
Score = 22.7 bits (47), Expect = 4.0, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 16 SLLNIKCDGRKVSIEVKIEDDWKEKRE 42
+L+ DGRKV + + D EKRE
Sbjct: 377 ALITATIDGRKVMLYTQRGDSSGEKRE 403
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff8256g051282
(101 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_817310 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.8
>M.Javanica_Scaff8256g051282 on XP_817310 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 904
Score = 23.5 bits (49), Expect = 2.8, Method: Composition-based stats.
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 18 ILQCEANIKSKNPKGNKE 35
+++C AN + K P GN+E
Sbjct: 150 LVECSANKEGKCPAGNEE 167
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7086g046678
(662 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_846883 VSG (Establishment) [Trypanosoma brucei] 29 1.1
AAW78169 TRAP (Invasion) [Plasmodium falciparum] 29 1.2
AAW78171 TRAP (Invasion) [Plasmodium falciparum] 27 3.2
AAW78134 TRAP (Invasion) [Plasmodium falciparum] 27 3.4
AAW78156 TRAP (Invasion) [Plasmodium falciparum] 27 4.5
AAW78167 TRAP (Invasion) [Plasmodium falciparum] 27 4.6
AAW78160 TRAP (Invasion) [Plasmodium falciparum] 27 5.0
AAW78131 TRAP (Invasion) [Plasmodium falciparum] 27 5.3
XP_001351437 PfEMP1 (Establishment) [Plasmodium falciparum] 26 7.2
>M.Javanica_Scaff7086g046678 on XP_846883 VSG (Establishment) [Trypanosoma brucei]
Length = 525
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 305 NTIFKTIRERVNLSLSKLPQFLSVSDI-LVTLFENF-NGTEECVKNGCNLTATPTTTTYS 362
N +F+T++ + ++ + Q + + L E F N ++EC +NGC T TT
Sbjct: 375 NRLFQTLKVQEPAAIPPISQLPRIDPLELKKKCEQFHNKSKECTENGCKWKGTDETTGTC 434
Query: 363 DYNLNKM 369
D + K+
Sbjct: 435 DVDETKV 441
>M.Javanica_Scaff7086g046678 on AAW78169 TRAP (Invasion) [Plasmodium falciparum]
Length = 551
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 31 VEENNNFTSFSTPQQPSLPQTPSITSIFSSPEISWQLPTL 70
VE N F P+ PS P+ PS S+P+I Q P +
Sbjct: 337 VENRNGFDLDENPENPSNPENPSNPENPSNPDIPEQEPNI 376
>M.Javanica_Scaff7086g046678 on AAW78171 TRAP (Invasion) [Plasmodium falciparum]
Length = 551
Score = 27.3 bits (59), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 32 EENNNFTSFSTPQQPSLPQTPSITSIFSSPEISWQLPTL 70
E N F P+ PS P+ PS S+P+I Q P +
Sbjct: 338 ENRNGFDLDENPENPSNPENPSNPENPSNPDIPEQEPNI 376
>M.Javanica_Scaff7086g046678 on AAW78134 TRAP (Invasion) [Plasmodium falciparum]
Length = 551
Score = 27.3 bits (59), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 32 EENNNFTSFSTPQQPSLPQTPSITSIFSSPEISWQLPTL 70
E N F P+ PS P+ PS S+P+I Q P +
Sbjct: 338 ENRNGFDLDENPENPSNPENPSNPENPSNPDIPEQEPNI 376
>M.Javanica_Scaff7086g046678 on AAW78156 TRAP (Invasion) [Plasmodium falciparum]
Length = 581
Score = 26.9 bits (58), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 36 NFTSFSTPQQPSLPQTPSITSIFSSPEISWQLPTL 70
N + S P+ PS P+ PS S+P+I Q P +
Sbjct: 372 NPENPSNPENPSNPENPSNPENPSNPDIPEQKPNI 406
>M.Javanica_Scaff7086g046678 on AAW78167 TRAP (Invasion) [Plasmodium falciparum]
Length = 575
Score = 26.9 bits (58), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 36 NFTSFSTPQQPSLPQTPSITSIFSSPEISWQLPTL 70
N + S P+ PS P+ PS S+P+I Q P +
Sbjct: 366 NPENPSNPENPSNPENPSNPENPSNPDIPEQKPNI 400
>M.Javanica_Scaff7086g046678 on AAW78160 TRAP (Invasion) [Plasmodium falciparum]
Length = 557
Score = 26.6 bits (57), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 36 NFTSFSTPQQPSLPQTPSITSIFSSPEISWQLPTL 70
N + S P+ PS P+ PS S+P+I Q P +
Sbjct: 348 NPENPSNPENPSNPENPSNPENPSNPDIPEQEPNI 382
>M.Javanica_Scaff7086g046678 on AAW78131 TRAP (Invasion) [Plasmodium falciparum]
Length = 557
Score = 26.6 bits (57), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 36 NFTSFSTPQQPSLPQTPSITSIFSSPEISWQLPTL 70
N + S P+ PS P+ PS S+P+I Q P +
Sbjct: 348 NPENPSNPENPSNPENPSNPENPSNPDIPEQEPNI 382
>M.Javanica_Scaff7086g046678 on XP_001351437 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2277
Score = 26.2 bits (56), Expect = 7.2, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 7/69 (10%)
Query: 374 DLNALKHVLINLEFLDSTAGVDYFSVGLMGDVFIAKNGSDEQNI--NKLDNNNS-----L 426
D + + +L +LE + D++ + DV K D N+ NK+DNNNS +
Sbjct: 2196 DKSTMDTILDDLEKYNEPYYYDFYKHDIYYDVNDDKASEDHINMDHNKMDNNNSDVPTNV 2255
Query: 427 QTSINTDND 435
Q +N N+
Sbjct: 2256 QIEMNVINN 2264
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7921g049984
(79 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_812956 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.3
XP_803305 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.2
XP_812720 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 6.0
>M.Javanica_Scaff7921g049984 on XP_812956 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1005
Score = 22.7 bits (47), Expect = 3.3, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query: 6 PSSTDPLLLSSSNEESPEQIEQKNKYLQAITSTPNNNHQHIHFKI-GDETDQEPLDNEMG 64
P+ T ++L EE +++K + + + N+H+ HF I GD D+ +
Sbjct: 589 PNETYQVVLQMDYEEWTAIVDKKKIHNKRYKKSLFNSHRISHFYIGGDSKDESATGGHVT 648
Query: 65 TSLATLIANKVW 76
+ L ++W
Sbjct: 649 VTNVMLYNEELW 660
>M.Javanica_Scaff7921g049984 on XP_803305 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 259
Score = 22.3 bits (46), Expect = 4.2, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 7/39 (17%)
Query: 14 LSSSNEESPEQIEQKNKYLQAI-------TSTPNNNHQH 45
L +SN E+PE++++K Q + T P+ N H
Sbjct: 134 LLTSNNENPEELDKKKLKTQVLEECSSDKTKCPSQNAFH 172
>M.Javanica_Scaff7921g049984 on XP_812720 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1041
Score = 21.9 bits (45), Expect = 6.0, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 30/57 (52%)
Query: 1 MDNLYPSSTDPLLLSSSNEESPEQIEQKNKYLQAITSTPNNNHQHIHFKIGDETDQE 57
+D P+ T ++L + +E +++K + + ++ N+H+ HF IG ++ +
Sbjct: 619 VDEWEPNKTYQVVLRMNYDEWTVFVDKKQIHNKKYNTSLFNSHRISHFYIGGDSKHQ 675
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6085g042379
(162 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_818477 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.8
>M.Javanica_Scaff6085g042379 on XP_818477 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 869
Score = 25.4 bits (54), Expect = 1.8, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 21/48 (43%)
Query: 45 KNKTKESEDTKTKCVYCQNPTIELTGGKIEGRISFVAGKNKPSIVFEG 92
K + E D+ +K VY PT + G I + +GK + EG
Sbjct: 149 KTQLLEEGDSPSKKVYVSRPTTVVNGSDIYMLVGKYSGKPAADVSVEG 196
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3989g032309
(172 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349036 PfEMP1 (Establishment) [Plasmodium falciparum] 24 4.7
>M.Javanica_Scaff3989g032309 on XP_001349036 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2192
Score = 24.3 bits (51), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
Query: 103 KKSDSTIISKNGTENPTNDS----VAGNDINSEEDNSFTTPKIKNCVPRSICYKEE 154
KK ++ + ENPT V ND EE+NS T P I C P++ +EE
Sbjct: 1647 KKKATSCPAPTSGENPTQCQEPPLVEDNDEAIEEENSVTQPNI--CPPQTPPKQEE 1700
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5822g041207
(277 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_813587 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.62
XP_808957 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.5
XP_803398 VSG (Establishment) [Trypanosoma brucei] 26 2.3
XP_820135 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 3.1
XP_809824 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 8.2
>M.Javanica_Scaff5822g041207 on XP_813587 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 751
Score = 28.1 bits (61), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 65/183 (35%), Gaps = 38/183 (20%)
Query: 13 SIISIYADDKEVEKHKVEEETKEKRDDKELTHKVEEETKEKRDDKEKRTEKTITGKKH-- 70
+ S+Y D + ++ E D V D E+ +GK H
Sbjct: 452 GVGSVYVDGTPLWNMRLRNSFNEGLD------AVSHFYFGAYD------EQLSSGKIHAT 499
Query: 71 ----VEADEPKSEISGADEREKRITAKKPTEKKPVEEV-----SDETREKRIATKEKKPT 121
+ P +E ++T P ++KPV S E+ R+ T +PT
Sbjct: 500 VANVFLYNRPLNETEIGALNANKVTIPPP-KRKPVPAAAATSPSVESANDRVNTN-TQPT 557
Query: 122 KPAEAEESAAEESREKRTIPKKEKPKAAEDETKVEEETREKRLTGTPKKEKPKTAEAEEE 181
P A +A + ++ T+ P T E PK E+PK AE+E E
Sbjct: 558 VPPPA--TAGPQQTDQATLNTSSVPSGGAPSTPAE-----------PKSEEPKPAESESE 604
Query: 182 TPK 184
PK
Sbjct: 605 EPK 607
>M.Javanica_Scaff5822g041207 on XP_808957 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1446
Score = 26.9 bits (58), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 59/131 (45%), Gaps = 15/131 (11%)
Query: 97 EKKPVEEVSDETREKRIATKEKKPTKPAEAEESAAEESREKRTIPKKEKPKAAEDETKVE 156
E KP E S E + E KP +P AE AE PK PK AE ++ E
Sbjct: 1011 EPKPAEPKSAEPEPAEPKSAEPKPAEPKSAEPKPAE--------PKSAGPKPAEPKS-AE 1061
Query: 157 EETREKRLTGTPKKEKPKTAEAEEETPKVEEETREKRLATTKKEKIKPVDEESKVEEETK 216
E E + G PK +PK+AE E PK + E + A K KP + +S E +
Sbjct: 1062 PEPTEPKSAG-PKPAEPKSAEPEPAEPK----SAEPKPAEPKSAGPKPAEPKS-AEPKPA 1115
Query: 217 EKRTIKKEKTK 227
E ++ + E TK
Sbjct: 1116 EPKSAEPEPTK 1126
>M.Javanica_Scaff5822g041207 on XP_803398 VSG (Establishment) [Trypanosoma brucei]
Length = 473
Score = 26.2 bits (56), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 18/32 (56%)
Query: 107 ETREKRIATKEKKPTKPAEAEESAAEESREKR 138
E +K+IA TKP EAE SAA E + R
Sbjct: 17 ENSKKKIAVAALAFTKPTEAENSAAAEGIKTR 48
>M.Javanica_Scaff5822g041207 on XP_820135 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1519
Score = 25.8 bits (55), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 58/120 (48%), Gaps = 7/120 (5%)
Query: 94 KPTEKKPVEEVSDETREKRIATKEKKPTKPAEAEESAAEESREKRTIPKKEKPKAAED-- 151
KP E KP E S E + + E KP +P AE AE K PK +PK+AE
Sbjct: 969 KPAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAE---PKSAEPKPAEPKSAEPKP 1025
Query: 152 -ETKVEEETREKRLTGTPKKEKPKTAEAEEETPK-VEEETREKRLATTKKEKIKPVDEES 209
E K E + + PK +PK AE + PK E+++ E + A K + KP +++S
Sbjct: 1026 AEPKSAEPKPAEPKSAEPKSAEPKPAEPKPAEPKPAEQKSAESKPAEQKSAESKPAEQKS 1085
Score = 25.8 bits (55), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 94 KPTEKKPVEEVSDETREKRIATKEKKPTKPAEAEESAAE--ESREKRTIPKKEKPKAAED 151
KP E KP E S E + + E KP +P AE AE + K T PK +PK AE
Sbjct: 794 KPAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPTEPKSAEPKPAEP 853
Query: 152 ETKVEEETREKRLTGTPKKEKPKTAEAEEETPKVEE 187
+ E ++ E + T PK PK AE + PK E
Sbjct: 854 KP-AEPKSAEPKPT-EPKSAGPKPAEPKPAEPKSAE 887
Score = 25.8 bits (55), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 49/106 (46%), Gaps = 5/106 (4%)
Query: 87 EKRITAKKPTEKKPVEEVSDETREKRIATKEKKPTKPAEAEESAAE--ESREKRTIPKKE 144
E + KP E KP E S E + + E KP +P AE +AE + K PK
Sbjct: 867 EPKSAGPKPAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKSAEPKPAEPKSAEPKPA 926
Query: 145 KPKAAED---ETKVEEETREKRLTGTPKKEKPKTAEAEEETPKVEE 187
+PK+AE E K E + + PK +PK+AE + PK E
Sbjct: 927 EPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKPAE 972
Score = 25.4 bits (54), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 84/215 (39%), Gaps = 12/215 (5%)
Query: 2 KTSVLCLFLIISIISIYADDKEVEKHKVEEETKEKRDD-KELTHKVEEETKEKRDDKEKR 60
KT + L + + S+Y D + + E D +E R +
Sbjct: 606 KTYHVVLKMHDGVGSVYVDGTLLWNMSLRNSFNEGLDAVSHFYFGAYDEQLSSRKNHATV 665
Query: 61 TEKTITGKKHVEADEPKSEISGADEREKRITAKKPTEKKPVEEVSDETREKRIATKEKKP 120
+ + E +EI + + I K E KP E S E + + E KP
Sbjct: 666 ANVFLYNRPLNE-----TEIGALNANKVTIPPPKSAEPKPAEPKSAEPKPAEPKSAEPKP 720
Query: 121 TKPAEAEESAAE--ESREKRTIPKKEKPKAAED---ETKVEEETREKRLTGTPKKEKPKT 175
+P AE +AE + +K PK +PK+AE E K E + + PK +PK
Sbjct: 721 AEPKPAEPKSAEPKPAEQKSAEPKPAEPKSAEPKPTEPKSAEPKPAEPKSAEPKPAEPKP 780
Query: 176 AEAEEETPK-VEEETREKRLATTKKEKIKPVDEES 209
AE + PK E + E + A K + KP + +S
Sbjct: 781 AEPKPAEPKSAEPKPAEPKPAEPKSAEPKPAEPKS 815
>M.Javanica_Scaff5822g041207 on XP_809824 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 364
Score = 24.3 bits (51), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 70/186 (37%), Gaps = 34/186 (18%)
Query: 13 SIISIYADDKEVEKHKVEEETKEKRDDKELTHKVEEETKEKRDDKEKRTEKTITGKKH-- 70
+ S+Y D + + E D ++H E+ +GK H
Sbjct: 55 GVGSVYVDGTPLWNMSLRNSFNEGLD--AVSHFYFGAYDEQLS----------SGKIHAT 102
Query: 71 ----VEADEPKSEISGADEREKRITAKKPTEKKPVEEV-----SDETREKRIATKEKKPT 121
+ P +E ++T P E+KPV S E+ R+ T +PT
Sbjct: 103 VANVFLYNRPLNETEIGALNANKVTIPPP-ERKPVPAAAATSPSVESANDRVNTN-TQPT 160
Query: 122 KPAEAEESAAEESREKRTIPKKEKPKAAEDETKVEEETREKRLTGTP---KKEKPKTAEA 178
P+ A +A + ++ T+ P T E ++ E + P + E+PK AE+
Sbjct: 161 VPSPA--TAGPQQTDQATLNTSSVPSGGAPSTPAEPKSEEPK----PAESRPEEPKPAES 214
Query: 179 EEETPK 184
E E PK
Sbjct: 215 ESEEPK 220
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3880g031693
(104 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351877 PfEMP1 (Establishment) [Plasmodium falciparum] 26 0.57
XP_817996 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.2
XP_809198 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.9
XP_815498 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.2
XP_817993 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.2
XP_001350409 PfEMP1 (Establishment) [Plasmodium falciparum] 23 3.4
XP_001350935 PfEMP1 (Establishment) [Plasmodium falciparum] 23 4.2
XP_829778 VSG (Establishment) [Trypanosoma brucei] 23 4.5
XP_844694 VSG (Establishment) [Trypanosoma brucei] 23 6.2
XP_807738 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 8.3
XP_809007 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 8.9
>M.Javanica_Scaff3880g031693 on XP_001351877 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2270
Score = 25.8 bits (55), Expect = 0.57, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 52 QFPISEKLTLEEVYDRRTGKPRGDLLKEHFIKEGRIE 88
Q P++ TL + PR D L++ FI+ IE
Sbjct: 1009 QSPVASNSTLTTSAKQSPSNPRADDLRDAFIQSAAIE 1045
>M.Javanica_Scaff3880g031693 on XP_817996 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 792
Score = 24.3 bits (51), Expect = 2.2, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 9/61 (14%)
Query: 14 NASASGANSPTSAAQTSIAAVRRPQPTHSTTERVIKSVQFPISEKLTLEEVYDRRTGKPR 73
+A +G+ S T++ RP T T +KSV P ++Y +T +PR
Sbjct: 660 SAGGAGSKEEVSVTVTNVLLYNRPLSTAEMTALKMKSVNIP--------KLYHAKT-EPR 710
Query: 74 G 74
G
Sbjct: 711 G 711
>M.Javanica_Scaff3880g031693 on XP_809198 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 832
Score = 23.9 bits (50), Expect = 2.9, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 9/61 (14%)
Query: 14 NASASGANSPTSAAQTSIAAVRRPQPTHSTTERVIKSVQFPISEKLTLEEVYDRRTGKPR 73
+A +G+ S T++ RP T T +KSV P ++Y +T +PR
Sbjct: 700 SAGGAGSKEEVSVTVTNVLLYNRPLSTAEMTALKMKSVNIP--------KLYHAKT-EPR 750
Query: 74 G 74
G
Sbjct: 751 G 751
>M.Javanica_Scaff3880g031693 on XP_815498 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 822
Score = 23.5 bits (49), Expect = 3.2, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 9/61 (14%)
Query: 14 NASASGANSPTSAAQTSIAAVRRPQPTHSTTERVIKSVQFPISEKLTLEEVYDRRTGKPR 73
+A +G+ S T++ RP T T +KSV P ++Y +T +PR
Sbjct: 690 SAGGAGSKEEVSVTVTNVLLYNRPLSTAEMTALKMKSVNIP--------KLYHAKT-EPR 740
Query: 74 G 74
G
Sbjct: 741 G 741
>M.Javanica_Scaff3880g031693 on XP_817993 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 830
Score = 23.5 bits (49), Expect = 3.2, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 9/61 (14%)
Query: 14 NASASGANSPTSAAQTSIAAVRRPQPTHSTTERVIKSVQFPISEKLTLEEVYDRRTGKPR 73
+A +G+ S T++ RP T T +KSV P ++Y +T +PR
Sbjct: 698 SAGGAGSKEEVSVTVTNVLLYNRPLSTAEMTALKMKSVNIP--------KLYHAKT-EPR 748
Query: 74 G 74
G
Sbjct: 749 G 749
>M.Javanica_Scaff3880g031693 on XP_001350409 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2223
Score = 23.5 bits (49), Expect = 3.4, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Query: 1 MASVATDPSSAATNASASGANSPTS 25
+ V +PS N +ASG N+PTS
Sbjct: 1872 LIEVVLEPS--GNNTTASGKNTPTS 1894
>M.Javanica_Scaff3880g031693 on XP_001350935 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2268
Score = 23.1 bits (48), Expect = 4.2, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 7 DPSSAATNASASGANSPTSAAQTS 30
D S A T +++SG+N P + Q S
Sbjct: 1239 DQSGAKTPSASSGSNDPINNPQLS 1262
>M.Javanica_Scaff3880g031693 on XP_829778 VSG (Establishment) [Trypanosoma brucei]
Length = 493
Score = 23.1 bits (48), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 43 TTERVIKSVQFPISEKLTLEEVYDRRTG 70
TT++ IK+ P S K +L E Y ++TG
Sbjct: 293 TTDKAIKNFLEPQSLKTSLSEAY-KKTG 319
>M.Javanica_Scaff3880g031693 on XP_844694 VSG (Establishment) [Trypanosoma brucei]
Length = 491
Score = 22.7 bits (47), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 31 IAAVRRPQPTHSTTERVIKSVQFPISEKLTLE 62
IA+V P+P +T VIK + K+T +
Sbjct: 13 IASVTSPRPGEATAGNVIKKANWQAICKVTAD 44
>M.Javanica_Scaff3880g031693 on XP_807738 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 896
Score = 22.3 bits (46), Expect = 8.3, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 2 ASVATDPSSAATNASASGA 20
AS+AT PSS A A+G+
Sbjct: 789 ASIATTPSSDAAQTVATGS 807
>M.Javanica_Scaff3880g031693 on XP_809007 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 160
Score = 21.9 bits (45), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 9/60 (15%)
Query: 15 ASASGANSPTSAAQTSIAAVRRPQPTHSTTERVIKSVQFPISEKLTLEEVYDRRTGKPRG 74
A +G+ S T++ RP T T +KSV P ++Y +T +PRG
Sbjct: 29 AGGAGSKEEVSVTVTNVLLYNRPLSTAEMTALKMKSVNIP--------KLYHAKT-EPRG 79
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4375g034277
(310 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_819146 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.47
XP_808840 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.7
XP_818190 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.9
XP_813677 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.4
XP_808550 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.7
>M.Javanica_Scaff4375g034277 on XP_819146 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 825
Score = 28.9 bits (63), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 109 SSSTTVPTTKMLQDSGYRSTISNSNFEEEMMVIAEKERKERRRQRRKTGLSSQQKPKEEG 168
SS V + +L SG N+N EEE++ + EK++ E L++Q K +E
Sbjct: 401 SSDDDVAASSLLYKSG------NNNDEEELITLYEKKKGESSSGMVSVLLTAQLKRVKEV 454
Query: 169 IMTVKNKDNNSSSVPAF 185
+ T K D S + F
Sbjct: 455 LTTWKEVDGRVSELCPF 471
>M.Javanica_Scaff4375g034277 on XP_808840 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 821
Score = 25.4 bits (54), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 12/49 (24%)
Query: 125 YRSTISNSNFEEEMMVIAEKERKERRRQRRKTGLSSQQKPKEEGIMTVK 173
YRS S +N +EE++ + EK++ E +KP G+++V+
Sbjct: 426 YRSGKSETNGKEELIALYEKKKAE------------GEKPPSPGMVSVR 462
>M.Javanica_Scaff4375g034277 on XP_818190 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 807
Score = 25.4 bits (54), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 8/99 (8%)
Query: 107 VSSSSTTVPTTKMLQDSGYRSTISNSNFEEEMMVIAEKER----KERRRQRRKTGLSSQQ 162
VS + V + +L Y+S S +N EE++ + EK++ K L+ Q
Sbjct: 426 VSGEAEDVAASSLL----YKSAGSGNNNNEELIALYEKKKGGGEKPSSLGMVSVLLTEQL 481
Query: 163 KPKEEGIMTVKNKDNNSSSVPAFLRRTCSNAANGINAIK 201
K +E ++T K D S + T + NG +A+K
Sbjct: 482 KQVKEVLVTWKKVDERVSKLCPSTAATNPSTGNGCSAVK 520
>M.Javanica_Scaff4375g034277 on XP_813677 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 945
Score = 25.0 bits (53), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 125 YRSTISNSNFEEEMMVIAEKERKERRR 151
YRS S +N +EE++ + EKE+ + +
Sbjct: 437 YRSGESETNKKEELIALYEKEKSDEGK 463
>M.Javanica_Scaff4375g034277 on XP_808550 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 948
Score = 25.0 bits (53), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 125 YRSTISNSNFEEEMMVIAEKERKERRR 151
YRS S +N +EE++ + EKE+ + +
Sbjct: 437 YRSGESETNKKEELIALYEKEKSDEGK 463
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff648g008520
(71 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351514 PfEMP1 (Establishment) [Plasmodium falciparum] 25 0.33
XP_001351515 PfEMP1 (Establishment) [Plasmodium falciparum] 25 0.35
XP_001350936 PfEMP1 (Establishment) [Plasmodium falciparum] 24 1.1
XP_001351517 PfEMP1 (Establishment) [Plasmodium falciparum] 22 3.7
XP_001349514 PfEMP1 (Establishment) [Plasmodium falciparum] 22 6.3
>M.Javanica_Scaff648g008520 on XP_001351514 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2201
Score = 25.4 bits (54), Expect = 0.33, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Query: 3 LNHNNNPPKSIEIPLNSQEIVSQFNSPQQHQKPPFLLFASVSATQSGE 50
L + N KS +IPLN+Q FN P++ PF+ SGE
Sbjct: 1915 LQNQPNDYKSEDIPLNTQPNTLYFNKPEEK---PFITSIHDRNLYSGE 1959
>M.Javanica_Scaff648g008520 on XP_001351515 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2181
Score = 25.4 bits (54), Expect = 0.35, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Query: 3 LNHNNNPPKSIEIPLNSQEIVSQFNSPQQHQKPPFLLFASVSATQSGE 50
L + N KS +IPLN+Q FN P++ PF+ SGE
Sbjct: 1895 LQNQPNDYKSEDIPLNTQPNTLYFNKPEEK---PFITSIHDRNLYSGE 1939
>M.Javanica_Scaff648g008520 on XP_001350936 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2163
Score = 23.9 bits (50), Expect = 1.1, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
Query: 8 NPPKSIEIPLNSQEIVSQFNSPQQHQKPPFL 38
N KS +IPLN+Q FN P++ PF+
Sbjct: 1907 NDYKSGDIPLNTQPNTLYFNKPEEK---PFI 1934
>M.Javanica_Scaff648g008520 on XP_001351517 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2193
Score = 22.3 bits (46), Expect = 3.7, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Query: 8 NPPKSIEIPLNSQEIVSQFNSPQQHQKPPFL 38
N S +IPLN+Q FN P++ PF+
Sbjct: 1935 NDYSSGDIPLNTQPNTLYFNKPEEK---PFI 1962
>M.Javanica_Scaff648g008520 on XP_001349514 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2120
Score = 21.6 bits (44), Expect = 6.3, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Query: 8 NPPKSIEIPLNSQEIVSQFNSPQQHQKPPFLLFASVSATQSGE 50
N S +IPLN+Q F+ PQ+ PF+ SGE
Sbjct: 1833 NDYSSGDIPLNTQPNTLYFDKPQEK---PFITSIHDRNLYSGE 1872
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff555g007555
(59 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAK97081 gGSP (Others) [Giardia duodenalis] 22 2.4
>M.Javanica_Scaff555g007555 on AAK97081 gGSP (Others) [Giardia duodenalis]
Length = 255
Score = 22.3 bits (46), Expect = 2.4, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 31 PSRMSVDLITNYKLQSFRKPLDSLVWLWI 59
P+ +L+ NY++ SF+ +D WL++
Sbjct: 141 PNPSLAELLLNYRIISFKTSIDKQ-WLYV 168
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff26297g092165
(87 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_821078 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.9
XP_001611897 variant erythrocyte surface antigen-1, alpha subun... 23 4.4
XP_820147 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.7
XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum] 22 7.9
>M.Javanica_Scaff26297g092165 on XP_821078 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 940
Score = 23.9 bits (50), Expect = 1.9, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
Query: 4 FFYILVIITIVYLHICDC-----AKESSDKKVESKG 34
FY V++ +V + C C ++S+D K E KG
Sbjct: 43 LFYSAVLLLLVVMMCCACEAALAEEKSTDPKFEWKG 78
>M.Javanica_Scaff26297g092165 on XP_001611897 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1369
Score = 22.7 bits (47), Expect = 4.4, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 28 KKVESKGNPSLRVKGGSTLKVNIKCRLRTLSQPYYG 63
K VESKG S G + ++ + KCR+ L + G
Sbjct: 634 KDVESKGVISWMCLGCNPMEHDRKCRVEKLRKGLVG 669
>M.Javanica_Scaff26297g092165 on XP_820147 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 878
Score = 22.3 bits (46), Expect = 5.7, Method: Composition-based stats.
Identities = 12/25 (48%), Positives = 12/25 (48%)
Query: 24 ESSDKKVESKGNPSLRVKGGSTLKV 48
ES D VES G PSL G V
Sbjct: 80 ESDDVTVESLGAPSLLKVGNDVFAV 104
>M.Javanica_Scaff26297g092165 on XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3346
Score = 21.9 bits (45), Expect = 7.9, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Query: 23 KESSDKKVESKGNPSLRVKGGSTLKVNIKCRLRTLSQPYYGFSIFIDLVADPRACDVSLS 82
KE DK+ + N VK S + K L TL Q Y +F++ V P + + +
Sbjct: 1901 KEEFDKQSKKYENEIDDVKHNSD-NIYGKDFLETLDQQYKSVELFLEKVKGPCSINNNNE 1959
Query: 83 RCR 85
C+
Sbjct: 1960 ECK 1962
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff26275g092132
(165 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAE53332 SuAT1 (Establishment) [Theileria annulata] 23 9.4
>M.Javanica_Scaff26275g092132 on CAE53332 SuAT1 (Establishment) [Theileria annulata]
Length = 558
Score = 23.1 bits (48), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 149 DQDLTPDGETHTHI 162
D+D+ DG TH+HI
Sbjct: 223 DEDIDVDGPTHSHI 236
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4386g034340
(88 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001347691 PfEMP1 (Establishment) [Plasmodium falciparum] 26 0.28
XP_001349533 PfEMP3 (Establishment) [Plasmodium falciparum] 26 0.34
XP_001350409 PfEMP1 (Establishment) [Plasmodium falciparum] 25 0.81
XP_001351321 PfEMP1 (Establishment) [Plasmodium falciparum] 22 6.7
>M.Javanica_Scaff4386g034340 on XP_001347691 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2182
Score = 26.2 bits (56), Expect = 0.28, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 32 KDDWEE-KREFIYLKNVRNKGSFGKLIHVEV 61
+ +WE+ K+ F KN+ N G F KL H +V
Sbjct: 703 QQEWEQIKKHFRKQKNIDNVGGFFKLSHDDV 733
>M.Javanica_Scaff4386g034340 on XP_001349533 PfEMP3 (Establishment) [Plasmodium falciparum]
Length = 2441
Score = 25.8 bits (55), Expect = 0.34, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 12/67 (17%)
Query: 27 VEVKFKDDWEEKREFIYLKN--VRNKGSFGKLIHVEVKFK-------DDWEEKREFIYLK 77
V K +++ EE E Y+KN ++NKGS G + E+K K D +E E LK
Sbjct: 1045 VTNKARENLEEYEEKDYMKNNELQNKGSDGLKENAELKNKELRNKGSDGLKENAE---LK 1101
Query: 78 NVEIKDR 84
N E++++
Sbjct: 1102 NKELRNK 1108
Score = 22.7 bits (47), Expect = 4.7, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 16 LKIQCEGKLIHVEVKFKDDWEEKREFIYLKNVRNKGSFGKLIHVEVKFKD----DWEEKR 71
LK E K + K D +E E + K +RNKGS G + E+K K+ E +
Sbjct: 1075 LKENAELKNKELRNKGSDGLKENAE-LKNKELRNKGSDGLKENAELKNKELQNKGSEGLK 1133
Query: 72 EFIYLKNVEIKDR 84
E LKN E++++
Sbjct: 1134 ENAELKNKELQNK 1146
Score = 22.7 bits (47), Expect = 4.8, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Query: 45 KNVRNKGSFGKLIHVEVKFKD----DWEEKREFIYLKNVEIKDR 84
K +RNKGS G + E+K K+ E +E LKN E++++
Sbjct: 1160 KELRNKGSEGLKENAELKNKELQNKGSEGLKENAELKNKELQNK 1203
>M.Javanica_Scaff4386g034340 on XP_001350409 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2223
Score = 25.0 bits (53), Expect = 0.81, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 13/48 (27%)
Query: 34 DWEEKREFIYLKNVRNKGSFGKLIHVE---------VKFKDD-WEEKR 71
D+ K ++ + KN+ NKG+F H E VK KD+ W+EK+
Sbjct: 486 DFSNKCDYRFDKNINNKGTF---YHSEYCQPCPGCGVKRKDNQWKEKK 530
>M.Javanica_Scaff4386g034340 on XP_001351321 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3467
Score = 22.3 bits (46), Expect = 6.7, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 20 CEGKLIHVEVKFKDDWEEKREFIYLKNVRNKGSFGKLIHV------EVKFKDDWEEK 70
CE +E K KD+WE+ +E + K+ + + KL V +V F D +EK
Sbjct: 619 CECYEAWIERK-KDEWEKLKEVLNKKDETSHNYYNKLKDVFDRFLFQVMFALDQDEK 674
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff25763g091402
(68 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_813188 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 3.0
AAZ38166 RON4 (Invasion) [Toxoplasma gondii] 21 7.2
>M.Javanica_Scaff25763g091402 on XP_813188 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1002
Score = 22.3 bits (46), Expect = 3.0, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Query: 12 LPITTNDPVLVETTYG--TIRGFPLNI--DEDTTPKTVKMFLG 50
+P +D E +G + G P +I D T PK K FLG
Sbjct: 167 IPHDDDDEEKKEFNWGIKSTSGVPYDIWGDYSTNPKRFKQFLG 209
>M.Javanica_Scaff25763g091402 on AAZ38166 RON4 (Invasion) [Toxoplasma gondii]
Length = 255
Score = 21.2 bits (43), Expect = 7.2, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 22/55 (40%)
Query: 2 LLILFLLLFPLPITTNDPVLVETTYGTIRGFPLNIDEDTTPKTVKMFLGIPFAKP 56
LL+L L + ++ P Y + PL+ + TP T + L I P
Sbjct: 12 LLVLLTLACGTTVQSSPPTPAPRMYPNMNERPLSAESRLTPGTYRSELHIDLKSP 66
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2662g024415
(176 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum] 25 2.4
XP_806774 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.5
XP_818889 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.9
XP_828099 VSG (Establishment) [Trypanosoma brucei] 24 5.6
CAD98656 gp40/15 (Adhesin) [Cryptosporidium parvum] 24 5.8
>M.Javanica_Scaff2662g024415 on XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3954
Score = 25.4 bits (54), Expect = 2.4, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Query: 86 CTVKINNGETK---CKITGDELNGNLI-FKTEKGTEISASFEQAKLFSENKCVIELDTY 140
C K+ GE K C I +E + + TE GT+ +Q KL + C+ D Y
Sbjct: 2932 CGYKLAGGEIKPNDCNIPTEESTHQFLRWLTEWGTQYCKEKQQLKLNMQIPCMTHFDKY 2990
>M.Javanica_Scaff2662g024415 on XP_806774 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 837
Score = 25.4 bits (54), Expect = 2.5, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 14/96 (14%)
Query: 79 QVAGQEPCTVKINNGE--TKCKITGDELNGNLIFKTEKGTEISASFEQAKLFSENKCVIE 136
+V G PC +K + + + I GD G+ KT K ++S + + L++ E
Sbjct: 673 RVGGNAPCGLKNTDSKEISHFYIGGD---GD---KTRKQEDVSVTVKNVLLYNRPLDSTE 726
Query: 137 LDTYNKETHETKLKINGNNFMIKKKEGSVSIKCGGR 172
+D YN +N EG+VS GR
Sbjct: 727 IDAYNPNKASIPFLVN------TTIEGTVSSSTAGR 756
>M.Javanica_Scaff2662g024415 on XP_818889 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 750
Score = 24.3 bits (51), Expect = 4.9, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 14/96 (14%)
Query: 79 QVAGQEPCTVKINNGE--TKCKITGDELNGNLIFKTEKGTEISASFEQAKLFSENKCVIE 136
+V G PC +K + + + I GD G+ KT K ++S + L++ E
Sbjct: 586 RVGGNAPCGLKNTDSKEISHFYIGGD---GD---KTRKQEDVSVTVTNVLLYNRPLDSTE 639
Query: 137 LDTYNKETHETKLKINGNNFMIKKKEGSVSIKCGGR 172
+D YN +N EG+VS GR
Sbjct: 640 IDAYNPNKASIPFLVN------TTIEGTVSSSTAGR 669
>M.Javanica_Scaff2662g024415 on XP_828099 VSG (Establishment) [Trypanosoma brucei]
Length = 527
Score = 24.3 bits (51), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 6/61 (9%)
Query: 111 KTEKGTEISASFEQAK----LFSENKCVIE--LDTYNKETHETKLKINGNNFMIKKKEGS 164
KT I A+F Q K F V E +DT N+ET + N +IK++E +
Sbjct: 66 KTAMAYRIKAAFSQDKQTEIAFLAMAAVTEAGIDTLNRETEAAAKRYNDAVRIIKQQEAA 125
Query: 165 V 165
+
Sbjct: 126 M 126
>M.Javanica_Scaff2662g024415 on CAD98656 gp40/15 (Adhesin) [Cryptosporidium parvum]
Length = 255
Score = 23.9 bits (50), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 139 TYNKETHETKLKINGNNFMIKKKEGSVSIKCGGRA 173
T+ K + K+K+NG +F S + GG A
Sbjct: 169 TFEKSYNTVKIKVNGQDFSTLSANSSSPTENGGSA 203
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff768g009713
(121 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum] 25 1.3
XP_817637 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.3
XP_811304 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.8
XP_802428 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.5
>M.Javanica_Scaff768g009713 on XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2858
Score = 25.0 bits (53), Expect = 1.3, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Query: 67 FTTDAEAPSIGHRGAHRSHLQQQSS-SGSSSRVCSETEFRCDDGHC 111
F D AP G HL+ + S +C+ + C++G C
Sbjct: 80 FRFDTNAPDKGSYDRDPCHLRDTNRFSDKGDAICTNNKINCNNGGC 125
>M.Javanica_Scaff768g009713 on XP_817637 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 986
Score = 24.3 bits (51), Expect = 2.3, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 7/52 (13%)
Query: 69 TDAEAPSIGHRGAHRSHLQQQSSSGS-------SSRVCSETEFRCDDGHCIR 113
+DA A S G RG+H + ++ + GS +S + DDG +R
Sbjct: 803 SDAAAVSSGGRGSHGTREEETETDGSGELASPPASSSVGTSAHSGDDGMGVR 854
>M.Javanica_Scaff768g009713 on XP_811304 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 892
Score = 23.9 bits (50), Expect = 3.8, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 52 RGPPGVRPGFISGTVFTTD 70
+G GVR GFI+ T+ D
Sbjct: 453 KGAKGVRSGFITATIENRD 471
>M.Javanica_Scaff768g009713 on XP_802428 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 279
Score = 23.5 bits (49), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Query: 41 LLGVEPPHPFHRGPPGVRPGFISGTVFTTDAEAPSIGHRGAHRSH 85
L+G E P PP + + G V T D E+P IG+ H
Sbjct: 139 LIGTEMPFSGEHFPPNIDLPLM-GQVDTADEESPRIGNTDDQAPH 182
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6616g044726
(148 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_820300 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.86
XP_806427 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.2
XP_803375 VSG (Establishment) [Trypanosoma brucei] 25 1.8
XP_815188 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.2
XP_812314 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.9
XP_805179 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.0
XP_810288 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.8
XP_001610713 variant erythrocyte surface antigen-1, alpha subun... 23 7.9
XP_812313 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 8.0
>M.Javanica_Scaff6616g044726 on XP_820300 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 660
Score = 26.2 bits (56), Expect = 0.86, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Query: 19 STVEECNELFT---KNEGYNASECKCYIDLITCKTLI 52
+TV E N+++ KN G N +ECK D I L+
Sbjct: 169 TTVVEGNDIYMLVGKNSGENLAECKATTDTIKSGILL 205
Score = 23.5 bits (49), Expect = 6.4, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 4/44 (9%)
Query: 101 DCFYQRKCTPVS----ASSTNKKYRSIGIIAGFSGINKGNFGEN 140
D + CT S AS+ + ++ I AG G GNF EN
Sbjct: 480 DDIVSKLCTSESVEKDASTEDACSPTVKITAGLVGFLSGNFSEN 523
>M.Javanica_Scaff6616g044726 on XP_806427 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 886
Score = 25.8 bits (55), Expect = 1.2, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Query: 100 IDCFYQRKCTPVSA---SSTNKKYRSIGIIAGFSGINKGNFGEN 140
+D + CT +SA +ST ++ I G G GNF EN
Sbjct: 471 VDERVSKLCTSLSALEGTSTENACSTVDITDGLVGFLSGNFSEN 514
>M.Javanica_Scaff6616g044726 on XP_803375 VSG (Establishment) [Trypanosoma brucei]
Length = 508
Score = 25.0 bits (53), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Query: 35 NASECKCYIDLITCKTLISSQTCP-SDVASTNLFKNTTDCEMM 76
NA+E + DLI K IS+ T P +D A T++ D EM+
Sbjct: 23 NAAEYRALCDLIALKESISTLTEPTADTAVTDIV---NDIEML 62
>M.Javanica_Scaff6616g044726 on XP_815188 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 862
Score = 25.0 bits (53), Expect = 2.2, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 18 SSTVEECN--ELFTKNEGYNASECKCYIDLITCKTLI 52
++ V+E N L KN G N +ECK D I L+
Sbjct: 167 TAVVDESNIYMLVGKNSGENLAECKATTDTIKSGILL 203
>M.Javanica_Scaff6616g044726 on XP_812314 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 923
Score = 24.3 bits (51), Expect = 3.9, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Query: 100 IDCFYQRKCTPVSAS---STNKKYRSIGIIAGFSGINKGNFGEN 140
+D + CT + A ST+ ++ I AG G GNF EN
Sbjct: 472 VDGRVSQLCTSLIAEKDLSTDDVCSAVKITAGLVGFLSGNFSEN 515
>M.Javanica_Scaff6616g044726 on XP_805179 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 793
Score = 24.3 bits (51), Expect = 4.0, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Query: 100 IDCFYQRKCTPVSASS---TNKKYRSIGIIAGFSGINKGNFGEN 140
+D + C P SA+ T+ + I AG G GNF EN
Sbjct: 482 VDKRVSKLCPPSSANEGRLTDSACSAGKITAGLVGFLSGNFSEN 525
>M.Javanica_Scaff6616g044726 on XP_810288 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 874
Score = 23.9 bits (50), Expect = 5.8, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 107 KCTPVSASSTNKKYRSIGIIAGFSGINKGNFGE 139
K SAS N + ++ I G G GNF E
Sbjct: 487 KSAAESASPENARSTAVRITDGLVGFLSGNFSE 519
>M.Javanica_Scaff6616g044726 on XP_001610713 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1294
Score = 23.5 bits (49), Expect = 7.9, Method: Composition-based stats.
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 79 ECSTAEEKSCKAGMCEC 95
+CST +C A C+C
Sbjct: 171 QCSTGGSSTCTAATCKC 187
>M.Javanica_Scaff6616g044726 on XP_812313 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 920
Score = 23.5 bits (49), Expect = 8.0, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Query: 100 IDCFYQRKCTPVSAS---STNKKYRSIGIIAGFSGINKGNFGEN 140
+D + CT + A ST+ ++ I+AG G G F EN
Sbjct: 474 VDKSVSQLCTSLIAQKDRSTDNACGAVKIMAGLVGFLSGKFSEN 517
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3850g031527
(120 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum] 25 1.1
XP_828095 VSG (Establishment) [Trypanosoma brucei] 25 1.7
XP_829779 VSG (Establishment) [Trypanosoma brucei] 25 1.8
XP_001351437 PfEMP1 (Establishment) [Plasmodium falciparum] 24 3.1
XP_843646 VSG (Establishment) [Trypanosoma brucei] 23 6.9
XP_001348165 RESA (Others) [plasmodium falciparum] 23 7.1
XP_001219197 VSG (Establishment) [Trypanosoma brucei] 23 7.2
>M.Javanica_Scaff3850g031527 on XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2994
Score = 25.4 bits (54), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 6/32 (18%)
Query: 52 PLGCGYVCSDVVCIKEGKTCDIQEDGCCYGTK 83
PLG G++C+D KEG+ +EDG C +
Sbjct: 1241 PLGLGWLCND----KEGEKG--KEDGLCIPPR 1266
>M.Javanica_Scaff3850g031527 on XP_828095 VSG (Establishment) [Trypanosoma brucei]
Length = 517
Score = 24.6 bits (52), Expect = 1.7, Method: Composition-based stats.
Identities = 9/13 (69%), Positives = 10/13 (76%)
Query: 106 CNGNCANGKCYEY 118
CNGN ANG C +Y
Sbjct: 318 CNGNVANGICVKY 330
>M.Javanica_Scaff3850g031527 on XP_829779 VSG (Establishment) [Trypanosoma brucei]
Length = 486
Score = 24.6 bits (52), Expect = 1.8, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 13/27 (48%), Gaps = 3/27 (11%)
Query: 89 KTCKKCSFNKCTTTDDCCNGNCANGKC 115
K CK NKCT DC + GKC
Sbjct: 428 KKCKDTEKNKCTADKDC---EYSEGKC 451
>M.Javanica_Scaff3850g031527 on XP_001351437 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2277
Score = 24.3 bits (51), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 69 KTCDIQEDGCCYGTKCVAYSKTCK 92
+ C + EDG G KC Y + CK
Sbjct: 1296 RECKVDEDGPRDGKKCSGYGEDCK 1319
>M.Javanica_Scaff3850g031527 on XP_843646 VSG (Establishment) [Trypanosoma brucei]
Length = 526
Score = 23.1 bits (48), Expect = 6.9, Method: Composition-based stats.
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 103 DDCCNGNCANGKCYEYTD 120
D C+G ANG C +Y D
Sbjct: 312 DFSCDGKNANGVCIKYAD 329
>M.Javanica_Scaff3850g031527 on XP_001348165 RESA (Others) [plasmodium falciparum]
Length = 1085
Score = 23.1 bits (48), Expect = 7.1, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 7 KIICLFLSIILFKLTNQCINISHKDHCDNSASKGCCKGR 45
KI+ + I L+ + N +N + + DNS + K R
Sbjct: 792 KIVSYIVDISLYDIENTALNAAEQLLSDNSVDEKTLKKR 830
>M.Javanica_Scaff3850g031527 on XP_001219197 VSG (Establishment) [Trypanosoma brucei]
Length = 345
Score = 22.7 bits (47), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 44 GRDYCKHKPLGCGYVCSDVVCIKEGKTCDIQEDGCCY 80
G+D H+ G + D+VC+ EG G CY
Sbjct: 93 GQDSGNHQTKGGEALMKDLVCLCEGTDQQSPPGGLCY 129
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff483g006785
(164 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_808824 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.74
XP_818193 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.74
AAB60239 Tams1 (Invasion) [Theileria annulata] 25 1.5
AAR88085 TbcatB (Cysteine proteases) [Trypanosoma brucei] 25 2.4
>M.Javanica_Scaff483g006785 on XP_808824 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 777
Score = 26.6 bits (57), Expect = 0.74, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 8/51 (15%)
Query: 44 MLCTGLDCAVVTERNGCQLCACPIGSPARGCDPMPFVLWHDLIVNGCPNVT 94
M+C G A TE + + +G P PF +W D VNG V+
Sbjct: 54 MMCCGSGGAAATEN------SVSGAAQGQGSSPSPFFVWRD--VNGGETVS 96
>M.Javanica_Scaff483g006785 on XP_818193 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 838
Score = 26.6 bits (57), Expect = 0.74, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 8/51 (15%)
Query: 44 MLCTGLDCAVVTERNGCQLCACPIGSPARGCDPMPFVLWHDLIVNGCPNVT 94
M+C G A TE + + +G P PF +W D VNG V+
Sbjct: 109 MMCCGSGGAAATEN------SVSGAAQGQGSSPSPFFVWRD--VNGGETVS 151
>M.Javanica_Scaff483g006785 on AAB60239 Tams1 (Invasion) [Theileria annulata]
Length = 281
Score = 25.4 bits (54), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 84 DLIVNGCPNVTVNTRDP 100
D+ C NVT +TRDP
Sbjct: 39 DVTATSCENVTFDTRDP 55
>M.Javanica_Scaff483g006785 on AAR88085 TbcatB (Cysteine proteases) [Trypanosoma brucei]
Length = 340
Score = 25.0 bits (53), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 117 TDQCEPYIFPYCSE 130
+D C+PY FP+CS
Sbjct: 181 SDYCQPYPFPHCSH 194
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7791g049483
(74 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_821102 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.40
XP_817637 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.3
XP_816886 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.3
XP_001350796 PfEMP1 (Establishment) [Plasmodium falciparum] 23 1.5
XP_820662 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.1
XP_805204 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.3
XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum] 22 4.0
XP_820181 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 7.8
>M.Javanica_Scaff7791g049483 on XP_821102 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 929
Score = 25.0 bits (53), Expect = 0.40, Method: Composition-based stats.
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 22 EGATYQFEKPPPKNSSDLAK 41
EG T Q E PPP + D+ K
Sbjct: 798 EGTTLQEEVPPPLGTEDIPK 817
>M.Javanica_Scaff7791g049483 on XP_817637 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 986
Score = 23.9 bits (50), Expect = 1.3, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 22 EGATYQFEKPPPKNSSDLAK 41
EG + Q E PPP + D+ K
Sbjct: 855 EGTSLQEEVPPPLGTEDIPK 874
>M.Javanica_Scaff7791g049483 on XP_816886 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 905
Score = 23.9 bits (50), Expect = 1.3, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 22 EGATYQFEKPPPKNSSDLAK 41
EG + Q E PPP + D+ K
Sbjct: 774 EGTSLQEEVPPPFGTEDIPK 793
>M.Javanica_Scaff7791g049483 on XP_001350796 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2646
Score = 23.5 bits (49), Expect = 1.5, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 47 GGGGKLKRSKRSPQDTSEWEFFIMPF 72
GGGG+ KR+ RS S ++ + F
Sbjct: 399 GGGGRKKRAARSSGSNSNYDGYESKF 424
>M.Javanica_Scaff7791g049483 on XP_820662 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 956
Score = 23.1 bits (48), Expect = 2.1, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 29 EKPPPKNSSDLAKNSLKEGGGGKLKRSKRSPQDTSE 64
E PP+ S + G G +R+++ P TSE
Sbjct: 752 EVTPPEASKQATPEAATPSGLGGQQRTEQDPLRTSE 787
>M.Javanica_Scaff7791g049483 on XP_805204 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 978
Score = 22.7 bits (47), Expect = 3.3, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
Query: 22 EGATYQFEKPPPKNSSDLAKNSL-----KEGGGGKLKRSKRSPQDTS 63
EG T Q E PPP + + K + +E + ++R Q+T+
Sbjct: 847 EGTTLQEEVPPPLGTEGIPKADVERLIHEEEATSPEEATERQTQETT 893
>M.Javanica_Scaff7791g049483 on XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1711
Score = 22.3 bits (46), Expect = 4.0, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 5/40 (12%)
Query: 27 QFEKPPPKNSSDLAKNSLKEGGGGKLKRSKRSPQDTSEWE 66
QF+K K +N + GGG + KRS S ++ +E
Sbjct: 391 QFDKQKQK-----YQNEISGGGGRRQKRSTHSTKEYEGYE 425
>M.Javanica_Scaff7791g049483 on XP_820181 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 648
Score = 21.6 bits (44), Expect = 7.8, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 6 LLTFFISFLFIVKINGEGATYQFEKPP 32
+LTF + L +V G G + E P
Sbjct: 5 VLTFAVLLLLVVMCCGSGGAHAVESKP 31
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3097g027118
(136 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350409 PfEMP1 (Establishment) [Plasmodium falciparum] 25 2.8
XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum] 23 6.1
>M.Javanica_Scaff3097g027118 on XP_001350409 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2223
Score = 24.6 bits (52), Expect = 2.8, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 55 LEKIDKQNNQYDISFNHNIEGFLRQIDINHERNIYNVEIVYGSEYAE 101
L+ ++K+N I+ I F + D ++NI N Y SEY +
Sbjct: 466 LKLLNKENECKGINEQEEIIDFSNKCDYRFDKNINNKGTFYHSEYCQ 512
>M.Javanica_Scaff3097g027118 on XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3954
Score = 23.5 bits (49), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 11/43 (25%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 65 YDISFNHNIEGFLRQIDINHERNIYNVEIVYGSEYAEELKRKV 107
YD HNI+G Q+ + N+Y ++ + S+ + K+
Sbjct: 1918 YDTKTKHNIQGVYTQLTDPSKNNMYE-KVTFPSKTGPSVNTKL 1959
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4725g036027
(125 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_821762 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.61
XP_001349035 PfEMP1 (Establishment) [Plasmodium falciparum] 24 3.4
XP_804139 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.7
XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum] 23 9.3
>M.Javanica_Scaff4725g036027 on XP_821762 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 811
Score = 26.2 bits (56), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Query: 72 AKIEKAESQVVSGV---LYTLTLRVGKTDCLKTQVNSDNLSECNKYTGDLDNTEARK 125
AK EK + +G+ L TLT K D L QV + L EC + + EA +
Sbjct: 113 AKCEKQDEGRFTGIASKLLTLTGEQAKEDLLTAQVKTQVLEECPSKKNNCASQEAAR 169
>M.Javanica_Scaff4725g036027 on XP_001349035 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2239
Score = 23.9 bits (50), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 78 ESQVVSGVLYTLTLRVGKTDCLKTQVNSDNLSECNKYT 115
+S ++ +L L ++ CL TQ + + +EC KYT
Sbjct: 1598 KSDIIECMLEDLDTKIKTGSCL-TQPSGEKQAECEKYT 1634
>M.Javanica_Scaff4725g036027 on XP_804139 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 793
Score = 23.9 bits (50), Expect = 3.7, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Query: 18 PMTKGDSSGGDGGNVGMPGGRVPQDVNREDIKELATKGLAKIN 60
P T + G N P VP +N +KE++ G AK N
Sbjct: 713 PQTIASAVSGPEKNSAAPA--VPMTLNPHAVKEVSEGGAAKKN 753
>M.Javanica_Scaff4725g036027 on XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2994
Score = 22.7 bits (47), Expect = 9.3, Method: Composition-based stats.
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 21 KGDSSGGDGGNVGMPGGRVPQDVNRE 46
K D++GG+ + G++P+D R+
Sbjct: 948 KEDNNGGEDLQNQLKSGKIPEDFKRQ 973
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6158g042721
(140 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_804124 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.026
XP_815630 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.13
XP_803882 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.17
XP_816523 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.35
XP_807431 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.43
XP_807593 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.76
ABR92034 MSA-1 (Invasion) [Babesia bovis] 26 0.80
ABR92033 MSA-1 (Invasion) [Babesia bovis] 26 0.84
ABR92032 MSA-1 (Invasion) [Babesia bovis] 26 0.85
ABR92023 MSA-1 (Invasion) [Babesia bovis] 26 0.86
ABR92025 MSA-1 (Invasion) [Babesia bovis] 26 0.86
XP_812082 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.87
XP_807308 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.87
XP_815267 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.87
XP_806454 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.0
XP_807074 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.1
XP_807499 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.1
XP_804548 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.1
XP_806228 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.0
XP_001611898 variant erythrocyte surface antigen-1, beta subuni... 24 3.6
>M.Javanica_Scaff6158g042721 on XP_804124 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 272
Score = 30.4 bits (67), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 6 PFSTPQKTQQLQVHSFSVPACIPARGVLCPSA-SRTD 41
PF K +Q VHSF +PA + GV+ A +R D
Sbjct: 51 PFEDKGKVRQRVVHSFRLPALVNVDGVMVAIADARYD 87
>M.Javanica_Scaff6158g042721 on XP_815630 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 202
Score = 28.1 bits (61), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 6 PFSTPQKTQQLQVHSFSVPACIPARGVLCPSA-SRTD 41
PF + +Q VHSF +PA + GV+ A +R D
Sbjct: 51 PFEENGEVRQRVVHSFRLPALVNVDGVMVAIADARYD 87
>M.Javanica_Scaff6158g042721 on XP_803882 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 203
Score = 27.7 bits (60), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 6 PFSTPQKTQQLQVHSFSVPACIPARGVLCPSA 37
PF + +Q VHSF +PA + GV+ A
Sbjct: 51 PFEENGEVRQRVVHSFRLPALVNVDGVMVAIA 82
>M.Javanica_Scaff6158g042721 on XP_816523 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 892
Score = 27.3 bits (59), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 6 PFSTPQKTQQLQVHSFSVPACIPARGVLCPSA 37
PF K + VHSF +PA + GV+ A
Sbjct: 51 PFEKDGKVTERVVHSFRLPALVNVDGVMVAIA 82
>M.Javanica_Scaff6158g042721 on XP_807431 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 940
Score = 26.9 bits (58), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 6 PFSTPQKTQQLQVHSFSVPACIPARGVLC 34
PF K + VHSF +PA + GV+
Sbjct: 51 PFEKDGKVTERVVHSFRLPALVNVDGVMV 79
>M.Javanica_Scaff6158g042721 on XP_807593 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 715
Score = 26.2 bits (56), Expect = 0.76, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 6 PFSTPQKTQQLQVHSFSVPACIPARGVL 33
PF K + VHSF +PA + GV+
Sbjct: 44 PFEDKGKVTERVVHSFRLPALVDVDGVM 71
>M.Javanica_Scaff6158g042721 on ABR92034 MSA-1 (Invasion) [Babesia bovis]
Length = 319
Score = 26.2 bits (56), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 30/69 (43%), Gaps = 8/69 (11%)
Query: 19 HSFSVPACIPARGVLCPSASRTDPQGTAACPWPFSSPLSSRLQRSGRRLKTAPPQSSKRP 78
S VPA A GV P AS T PQG A S S LQ G++ T P SS
Sbjct: 246 ESTEVPAPGDASGVQQPPASGTSPQGPAPTTPSPSPESSGNLQ--GQQGTTKPAGSS--- 300
Query: 79 DSLFAFGLL 87
F +G L
Sbjct: 301 ---FTYGGL 306
>M.Javanica_Scaff6158g042721 on ABR92033 MSA-1 (Invasion) [Babesia bovis]
Length = 319
Score = 25.8 bits (55), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 30/69 (43%), Gaps = 8/69 (11%)
Query: 19 HSFSVPACIPARGVLCPSASRTDPQGTAACPWPFSSPLSSRLQRSGRRLKTAPPQSSKRP 78
S VPA A GV P AS T PQG A S S LQ G++ T P SS
Sbjct: 246 ESTEVPAPGDASGVQQPPASGTSPQGPAPTTPSPSPESSGNLQ--GQQGTTKPAGSS--- 300
Query: 79 DSLFAFGLL 87
F +G L
Sbjct: 301 ---FTYGGL 306
>M.Javanica_Scaff6158g042721 on ABR92032 MSA-1 (Invasion) [Babesia bovis]
Length = 319
Score = 25.8 bits (55), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 30/69 (43%), Gaps = 8/69 (11%)
Query: 19 HSFSVPACIPARGVLCPSASRTDPQGTAACPWPFSSPLSSRLQRSGRRLKTAPPQSSKRP 78
S VPA A GV P AS T PQG A S S LQ G++ T P SS
Sbjct: 246 ESTGVPAPGDASGVQQPPASGTSPQGPAPTTPSPSPESSGNLQ--GQQGTTKPAGSS--- 300
Query: 79 DSLFAFGLL 87
F +G L
Sbjct: 301 ---FTYGGL 306
>M.Javanica_Scaff6158g042721 on ABR92023 MSA-1 (Invasion) [Babesia bovis]
Length = 319
Score = 25.8 bits (55), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 30/69 (43%), Gaps = 8/69 (11%)
Query: 19 HSFSVPACIPARGVLCPSASRTDPQGTAACPWPFSSPLSSRLQRSGRRLKTAPPQSSKRP 78
S VPA A GV P AS T PQG A S S LQ G++ T P SS
Sbjct: 246 ESTEVPAPGDASGVQQPPASGTSPQGPAPTTPSPSPESSGNLQ--GQQGTTKPAGSS--- 300
Query: 79 DSLFAFGLL 87
F +G L
Sbjct: 301 ---FTYGGL 306
>M.Javanica_Scaff6158g042721 on ABR92025 MSA-1 (Invasion) [Babesia bovis]
Length = 319
Score = 25.8 bits (55), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 30/69 (43%), Gaps = 8/69 (11%)
Query: 19 HSFSVPACIPARGVLCPSASRTDPQGTAACPWPFSSPLSSRLQRSGRRLKTAPPQSSKRP 78
S VPA A GV P AS T PQG A S S LQ G++ T P SS
Sbjct: 246 ESTEVPAPGDASGVQQPPASGTSPQGPAPTTPSPSPESSGNLQ--GQQGTTKPAGSS--- 300
Query: 79 DSLFAFGLL 87
F +G L
Sbjct: 301 ---FTYGGL 306
>M.Javanica_Scaff6158g042721 on XP_812082 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 554
Score = 26.2 bits (56), Expect = 0.87, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 6 PFSTPQKTQQLQVHSFSVPACIPARGVL 33
PF K + VHSF +PA + GV+
Sbjct: 44 PFEDKGKVTERVVHSFRLPALVNVDGVM 71
>M.Javanica_Scaff6158g042721 on XP_807308 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 717
Score = 26.2 bits (56), Expect = 0.87, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 6 PFSTPQKTQQLQVHSFSVPACIPARGVL 33
PF K + VHSF +PA + GV+
Sbjct: 44 PFEDKGKVTERVVHSFRLPALVNVDGVM 71
>M.Javanica_Scaff6158g042721 on XP_815267 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 718
Score = 26.2 bits (56), Expect = 0.87, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 6 PFSTPQKTQQLQVHSFSVPACIPARGVL 33
PF K + VHSF +PA + GV+
Sbjct: 44 PFEDKGKVTERVVHSFRLPALVNVDGVM 71
>M.Javanica_Scaff6158g042721 on XP_806454 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 694
Score = 25.8 bits (55), Expect = 1.0, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 6 PFSTPQKTQQLQVHSFSVPACIPARGVL 33
PF K + VHSF +PA + GV+
Sbjct: 40 PFEENGKVTERVVHSFRLPALVNVDGVM 67
>M.Javanica_Scaff6158g042721 on XP_807074 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 822
Score = 25.8 bits (55), Expect = 1.1, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 6 PFSTPQKTQQLQVHSFSVPACIPARGVL 33
PF + +Q VHSF +PA + GV+
Sbjct: 51 PFEENGEVRQRVVHSFRLPALVNVDGVM 78
>M.Javanica_Scaff6158g042721 on XP_807499 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 834
Score = 25.8 bits (55), Expect = 1.1, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 6 PFSTPQKTQQLQVHSFSVPACIPARGVL 33
PF + +Q VHSF +PA + GV+
Sbjct: 51 PFEENGEVRQRVVHSFRLPALVNVDGVM 78
>M.Javanica_Scaff6158g042721 on XP_804548 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 691
Score = 25.8 bits (55), Expect = 1.1, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 13/28 (46%)
Query: 6 PFSTPQKTQQLQVHSFSVPACIPARGVL 33
PF K VHSF VPA GV+
Sbjct: 40 PFEDKGKVTDRVVHSFRVPALFDVDGVM 67
>M.Javanica_Scaff6158g042721 on XP_806228 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1204
Score = 25.0 bits (53), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 6 PFSTPQKTQQLQVHSFSVPACIPARGVLC 34
PF K VHSF +PA + GV+
Sbjct: 51 PFEKDGKVTDRVVHSFRLPALVNVDGVMV 79
>M.Javanica_Scaff6158g042721 on XP_001611898 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1214
Score = 24.3 bits (51), Expect = 3.6, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 12/29 (41%)
Query: 31 GVLCPSASRTDPQGTAACPWPFSSPLSSR 59
GV+CP + Q T CP P R
Sbjct: 498 GVVCPGGAGAAAQSTNKCPNHSKDPTHKR 526
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3456g029254
(96 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609040 variant erythrocyte surface antigen-1, alpha subun... 30 0.021
XP_808081 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.41
XP_812697 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.59
XP_001610714 variant erythrocyte surface antigen-1, alpha subun... 25 0.60
XP_818893 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.6
XP_001349032 PfEMP1 (Establishment) [Plasmodium falciparum] 24 1.7
XP_820498 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.7
XP_804884 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.7
XP_001350936 PfEMP1 (Establishment) [Plasmodium falciparum] 24 2.3
XP_808179 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.7
XP_818403 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.7
XP_820741 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.9
XP_001611366 variant erythrocyte surface antigen-1, beta subuni... 23 3.4
XP_815842 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.4
XP_818896 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.4
XP_818892 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.4
XP_814219 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.4
XP_001351564 PfEMP1 (Establishment) [Plasmodium falciparum] 23 5.4
XP_656181 Hgl2 (Adhesin) [Entamoeba histolytica] 22 8.0
XP_652394 Igl2 (Adhesin) [Entamoeba histolytica] 22 9.8
>M.Javanica_Scaff3456g029254 on XP_001609040 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1335
Score = 29.6 bits (65), Expect = 0.021, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 17/45 (37%), Gaps = 9/45 (20%)
Query: 27 QNCQKCAADVCGHP---------CNVSESACNNCKTIDLPKRCGC 62
+ C KC D CG P C S C + ++CGC
Sbjct: 176 RGCDKCDGDKCGKPGAGGGCQCQCKGGASGCTSASDCKCDRKCGC 220
>M.Javanica_Scaff3456g029254 on XP_808081 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 893
Score = 25.8 bits (55), Expect = 0.41, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
Query: 76 HRIC-DYPCSVGDSDCKKLSQ 95
HR+ D PC++G++D KK+S
Sbjct: 659 HRVGGDPPCALGNTDSKKISH 679
>M.Javanica_Scaff3456g029254 on XP_812697 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 911
Score = 25.4 bits (54), Expect = 0.59, Method: Composition-based stats.
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 76 HRICDYPCSVGDSDCKKLSQ 95
R+ D PC++G++D K +S
Sbjct: 676 QRVGDVPCALGNTDSKVISH 695
>M.Javanica_Scaff3456g029254 on XP_001610714 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1231
Score = 25.4 bits (54), Expect = 0.60, Method: Composition-based stats.
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 27 QNCQKCAADVCGHPC 41
+ CQKC D C H C
Sbjct: 167 RGCQKCEGDKCTHSC 181
>M.Javanica_Scaff3456g029254 on XP_818893 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 956
Score = 24.3 bits (51), Expect = 1.6, Method: Composition-based stats.
Identities = 7/16 (43%), Positives = 13/16 (81%)
Query: 80 DYPCSVGDSDCKKLSQ 95
D PC++G++D K++S
Sbjct: 677 DVPCALGNTDSKEISH 692
>M.Javanica_Scaff3456g029254 on XP_001349032 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2267
Score = 24.3 bits (51), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Query: 29 CQKCAADVCGHPCNVSESACNNCKTIDLPKRCGCCFPAVDETCEQCK 75
+ +D CG + ++ +NC+ ID P C D CE+ K
Sbjct: 1240 LHEWGSDFCGKRARMLKNVKHNCRNIDNPGHQYCSGDGYD--CEKIK 1284
>M.Javanica_Scaff3456g029254 on XP_820498 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 382
Score = 24.3 bits (51), Expect = 1.7, Method: Composition-based stats.
Identities = 7/16 (43%), Positives = 13/16 (81%)
Query: 80 DYPCSVGDSDCKKLSQ 95
D PC++G++D K++S
Sbjct: 275 DTPCALGNTDSKEISH 290
>M.Javanica_Scaff3456g029254 on XP_804884 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 732
Score = 24.3 bits (51), Expect = 1.7, Method: Composition-based stats.
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 36 VCGHPCNVSESACNNCKTIDLPKRCGCCFP 65
+C PC + + +N + LP+R G P
Sbjct: 57 MCCDPCGPAAAEDSNSGDVRLPQRVGLFLP 86
>M.Javanica_Scaff3456g029254 on XP_001350936 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2163
Score = 23.9 bits (50), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 21/55 (38%), Gaps = 4/55 (7%)
Query: 6 INFIIIALFGIFALIVSEENIQNCQKCAADVCGHPCNVSESACNNCKTIDLPKRC 60
INF I IF+ E Q C C A G E C KT D PK+
Sbjct: 476 INFKSIKDIDIFSHT---EYCQACPWCGAKRKGKGWEPKEKTCGKTKTYD-PKKT 526
>M.Javanica_Scaff3456g029254 on XP_808179 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 942
Score = 23.5 bits (49), Expect = 2.7, Method: Composition-based stats.
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 80 DYPCSVGDSDCKKLSQ 95
D PC++G+ D K++S
Sbjct: 664 DVPCALGNKDSKEISH 679
>M.Javanica_Scaff3456g029254 on XP_818403 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 957
Score = 23.5 bits (49), Expect = 2.7, Method: Composition-based stats.
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 80 DYPCSVGDSDCKKLSQ 95
D PC++G+ D K++S
Sbjct: 683 DVPCALGNKDSKEISH 698
>M.Javanica_Scaff3456g029254 on XP_820741 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 894
Score = 23.5 bits (49), Expect = 2.9, Method: Composition-based stats.
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 77 RICDYPCSVGDSDCKKLS 94
R+ D PC++ ++D K +S
Sbjct: 660 RVGDVPCALANTDSKDIS 677
>M.Javanica_Scaff3456g029254 on XP_001611366 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1173
Score = 23.5 bits (49), Expect = 3.4, Method: Composition-based stats.
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 31 KCAADVCGHPCNVSESACNNCKT 53
KC C P + + C++C+T
Sbjct: 160 KCVGGTCCSPGGSAATTCHDCRT 182
>M.Javanica_Scaff3456g029254 on XP_815842 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 894
Score = 23.1 bits (48), Expect = 3.4, Method: Composition-based stats.
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 80 DYPCSVGDSDCKKLSQ 95
D PC++G++D K +S
Sbjct: 664 DVPCALGNTDSKGISH 679
>M.Javanica_Scaff3456g029254 on XP_818896 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 725
Score = 23.1 bits (48), Expect = 4.4, Method: Composition-based stats.
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 80 DYPCSVGDSDCKKLSQ 95
D PC++G++D K +S
Sbjct: 678 DVPCALGNTDSKVISH 693
>M.Javanica_Scaff3456g029254 on XP_818892 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 956
Score = 23.1 bits (48), Expect = 4.4, Method: Composition-based stats.
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 80 DYPCSVGDSDCKKLSQ 95
D PC++G++D K +S
Sbjct: 677 DVPCALGNTDSKVISH 692
>M.Javanica_Scaff3456g029254 on XP_814219 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 958
Score = 23.1 bits (48), Expect = 4.4, Method: Composition-based stats.
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 80 DYPCSVGDSDCKKLSQ 95
D PC++G++D K +S
Sbjct: 679 DVPCALGNTDSKVISH 694
>M.Javanica_Scaff3456g029254 on XP_001351564 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2207
Score = 22.7 bits (47), Expect = 5.4, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 27 QNCQKCAADVCGHPCNVSESACNNCKTIDLP 57
+N C + G VS+S C NC + P
Sbjct: 362 RNGYDCTQTIRGRNILVSDSECTNCSVVCTP 392
>M.Javanica_Scaff3456g029254 on XP_656181 Hgl2 (Adhesin) [Entamoeba histolytica]
Length = 1286
Score = 22.3 bits (46), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 17/50 (34%), Gaps = 9/50 (18%)
Query: 32 CAADVCGHPCNVSESACNNCKTIDLPKRCGCCFPAVDETCEQCKHRICDY 81
C D G C S N CK C C+ KH ICDY
Sbjct: 585 CGGDSTGSVCKCDASTGNQCK---------CNKVENGNYCDSSKHEICDY 625
>M.Javanica_Scaff3456g029254 on XP_652394 Igl2 (Adhesin) [Entamoeba histolytica]
Length = 1105
Score = 21.9 bits (45), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 1 MASQKINFIIIALFGIFALIVSEENIQNCQKCAADV 36
+A +N + +G +E+N CQ C A V
Sbjct: 977 IAEVPVNGACVCAYGYVEGTSTEDNKIECQSCKAKV 1012
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff28808g095560
(92 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349035 PfEMP1 (Establishment) [Plasmodium falciparum] 23 3.6
XP_001350413 PfEMP1 (Establishment) [Plasmodium falciparum] 23 3.6
>M.Javanica_Scaff28808g095560 on XP_001349035 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2239
Score = 23.1 bits (48), Expect = 3.6, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 46 LVLNDYTHRAKEKCAKIDKGQKFSTKLW 73
L + T+ A +KI++ QK KLW
Sbjct: 1132 LTYEEKTNSASGSESKIEQNQKLKDKLW 1159
>M.Javanica_Scaff28808g095560 on XP_001350413 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2860
Score = 23.1 bits (48), Expect = 3.6, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 17 LCSGTRPKRREAITTQSHNLLQDTLI 42
LC K +A T +HNLL D L+
Sbjct: 133 LCDYNLEKITDANVTNTHNLLVDVLL 158
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4129g033015
(208 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_820303 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.5
XP_805613 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.5
AAM45258 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum] 24 9.3
ABB59606 CSP (Invasion) [Plasmodium falciparum] 22 9.3
>M.Javanica_Scaff4129g033015 on XP_820303 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 873
Score = 25.8 bits (55), Expect = 2.5, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 41 LTIATQDEEMANIEPDPLITYTGCDDPSMLDLAQQ 75
L I T ++ AN + +T GC DPS+++ ++
Sbjct: 276 LLIYTSEDNAANWKLSKEVTDGGCSDPSVVEWGEK 310
>M.Javanica_Scaff4129g033015 on XP_805613 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 874
Score = 25.0 bits (53), Expect = 3.5, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 41 LTIATQDEEMANIEPDPLITYTGCDDPSMLDLAQQ 75
L I T ++ AN + +T GC DPS+++ ++
Sbjct: 277 LLIYTSEDNAANWKLSKEVTDGGCGDPSVVEWGEK 311
>M.Javanica_Scaff4129g033015 on AAM45258 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum]
Length = 616
Score = 23.9 bits (50), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 4/97 (4%)
Query: 94 KAEGELFSGHFASLRNRLSDKDS----DDMSFYNTTNAIEQQLFSIFSRFRRQFFETSFN 149
K EG+ S LRN SD S DDM F T+ ++ + + FS + ++ N
Sbjct: 77 KNEGKDPSIFCNELRNSFSDFRSSFIGDDMDFGGNTDRVKGYINTKFSDYYKEKNVEKLN 136
Query: 150 NNPAYRYEDVTVPVHSYSRTNGVKDVFRRICIDPTDD 186
N +E + ++ N ++ + I P ++
Sbjct: 137 NIKKEWWEKNKANLWNHMIVNHKGNISKECAIIPAEE 173
>M.Javanica_Scaff4129g033015 on ABB59606 CSP (Invasion) [Plasmodium falciparum]
Length = 77
Score = 22.3 bits (46), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 13/51 (25%), Positives = 22/51 (43%)
Query: 73 AQQHYESYSANIQNVLDCYGIKAEGELFSGHFASLRNRLSDKDSDDMSFYN 123
+ +H E Y NIQN L +G ++ +DK D++ + N
Sbjct: 9 SDKHIEQYLTNIQNSLSTEWSPCSVTCGNGIQVRIKPGSADKPKDELDYEN 59
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4767g036207
(229 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3969g032190
(197 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_628559 gp900 (Adhesin) [Cryptosporidium parvum] 25 2.7
>M.Javanica_Scaff3969g032190 on XP_628559 gp900 (Adhesin) [Cryptosporidium parvum]
Length = 1937
Score = 25.4 bits (54), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Query: 45 KSSRPRKLASVTPEKEATRVAAAAKKPTTIPSPPKTQVGKKTKANTEETTTTKKVRSKES 104
K P V P++EA A K +P P + K NT+ + TT + + E+
Sbjct: 1350 KPGIPVNGGGVVPDEEAKDQADKGKDGLIVP--PTNSINKDPVTNTQYSNTTGNIINPET 1407
Query: 105 KK 106
K
Sbjct: 1408 GK 1409
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4341g034091
(100 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAK19757 MIC8 (Invasion) [Toxoplasma gondii] 23 4.5
>M.Javanica_Scaff4341g034091 on AAK19757 MIC8 (Invasion) [Toxoplasma gondii]
Length = 255
Score = 22.7 bits (47), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 69 FFGTIYQWLHNTWA 82
F+G+ W H+ WA
Sbjct: 97 FYGSCGSWCHDNWA 110
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4842g036592
(53 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_845135 VSG (Establishment) [Trypanosoma brucei] 23 1.2
>M.Javanica_Scaff4842g036592 on XP_845135 VSG (Establishment) [Trypanosoma brucei]
Length = 474
Score = 22.7 bits (47), Expect = 1.2, Method: Composition-based stats.
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 5 SGQGYSKHRVKDECEG 20
SG+ +S ++ KD CE
Sbjct: 408 SGESFSSYQTKDACEA 423
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4792g036339
(60 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_827742 VSG (Establishment) [Trypanosoma brucei] 22 3.4
XP_812615 Trans-sialidase (Invasion) [Trypanosoma cruzi] 21 9.5
>M.Javanica_Scaff4792g036339 on XP_827742 VSG (Establishment) [Trypanosoma brucei]
Length = 505
Score = 21.9 bits (45), Expect = 3.4, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
Query: 26 SGLGYRTRRAVSNDTKIEK 44
SG+ Y T RA+S D ++EK
Sbjct: 85 SGIAYSTLRAISQD-RLEK 102
>M.Javanica_Scaff4792g036339 on XP_812615 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1116
Score = 20.8 bits (42), Expect = 9.5, Method: Composition-based stats.
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 29 GYRTRRAVSNDTKIEKIRLDFTK 51
G+R R SN T+I ++ + T+
Sbjct: 37 GHRHARKESNQTRIATVKFEGTE 59
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff522g007170
(101 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_821548 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.49
XP_806427 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.54
XP_810753 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.56
ABA06473 MSA-2b (Invasion) [Babesia bovis] 25 1.1
XP_813585 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.4
XP_809825 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.5
XP_813236 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.5
XP_810383 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.4
XP_806668 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.6
XP_806300 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 6.7
XP_818312 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 7.0
XP_820382 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 7.5
AAL15422 MSA-2a2 (Invasion) [Babesia bovis] 22 8.6
AAL15421 MSA-2a1 (Invasion) [Babesia bovis] 22 9.0
ABA06450 MSA-2a1 (Invasion) [Babesia bovis] 22 9.3
>M.Javanica_Scaff522g007170 on XP_821548 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 958
Score = 25.8 bits (55), Expect = 0.49, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 16/40 (40%)
Query: 30 NIPQQHPHVGGPTSPVDETTSPVGGPTHPVDGPTSPGDGQ 69
N P P +G PV PT +SPG+GQ
Sbjct: 768 NRPLNDPEIGAFNPRKASIPPPVNTPTQLTAVQSSPGEGQ 807
>M.Javanica_Scaff522g007170 on XP_806427 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 886
Score = 25.8 bits (55), Expect = 0.54, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 16/40 (40%)
Query: 30 NIPQQHPHVGGPTSPVDETTSPVGGPTHPVDGPTSPGDGQ 69
N P P +G PV PT +SPG+GQ
Sbjct: 697 NRPLDDPEIGAFNPRKASIPPPVNTPTQLTAVQSSPGEGQ 736
>M.Javanica_Scaff522g007170 on XP_810753 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 955
Score = 25.8 bits (55), Expect = 0.56, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 16/40 (40%)
Query: 30 NIPQQHPHVGGPTSPVDETTSPVGGPTHPVDGPTSPGDGQ 69
N P P +G PV PT +SPG+GQ
Sbjct: 765 NRPLNDPEIGAFNPRKASIPPPVNTPTQLTAVQSSPGEGQ 804
>M.Javanica_Scaff522g007170 on ABA06473 MSA-2b (Invasion) [Babesia bovis]
Length = 316
Score = 24.6 bits (52), Expect = 1.1, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 13/36 (36%)
Query: 36 PHVGGPTSPVDETTSPVGGPTHPVDGPTSPGDGQLG 71
P P P E+ S PT P P GQ G
Sbjct: 254 PAAPSPQGPTAESPSQADHPTKPTQTPEGNLQGQQG 289
>M.Javanica_Scaff522g007170 on XP_813585 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 800
Score = 24.6 bits (52), Expect = 1.4, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 57 HPVDGPTSPGDGQLGLFFLKRNKTYKNK 84
H V GPT D ++G+F+ T NK
Sbjct: 167 HTVLGPTDGTDNRVGVFYHPTTNTKGNK 194
>M.Javanica_Scaff522g007170 on XP_809825 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 730
Score = 24.6 bits (52), Expect = 1.5, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 57 HPVDGPTSPGDGQLGLFFLKRNKTYKNK 84
H V GPT D ++G+F+ T NK
Sbjct: 169 HTVLGPTDGTDNRVGVFYHPTTTTKGNK 196
>M.Javanica_Scaff522g007170 on XP_813236 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 728
Score = 24.3 bits (51), Expect = 1.5, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 57 HPVDGPTSPGDGQLGLFFLKRNKTYKNK 84
H V GPT D ++G+F+ T NK
Sbjct: 166 HTVLGPTDGTDNRVGVFYHPTTTTKGNK 193
>M.Javanica_Scaff522g007170 on XP_810383 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 928
Score = 23.9 bits (50), Expect = 2.4, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 39 GGPTSPVDETTSPVGGPTHPVDGP 62
GG +S D+T G T P DGP
Sbjct: 801 GGSSSNDDQTVGAEAGDTVPGDGP 824
>M.Javanica_Scaff522g007170 on XP_806668 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 779
Score = 23.9 bits (50), Expect = 2.6, Method: Composition-based stats.
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 29 NNIPQQHPHVGGPTSPV 45
N++P HVGGPT+ V
Sbjct: 172 NSLPTTKLHVGGPTTVV 188
>M.Javanica_Scaff522g007170 on XP_806300 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 274
Score = 22.3 bits (46), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 41 PTSPVDETTSPVGGPTHPVDGP 62
P+S V +T + +GG T DGP
Sbjct: 175 PSSDVAQTVATMGGETVQGDGP 196
>M.Javanica_Scaff522g007170 on XP_818312 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 928
Score = 22.3 bits (46), Expect = 7.0, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 39 GGPTSPVDETTSPVGGPTHPVDGPTSPGDG 68
G P+S D T T DGP +P G
Sbjct: 799 GAPSSDADPTVGEGSADTIQGDGPHTPSVG 828
>M.Javanica_Scaff522g007170 on XP_820382 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 729
Score = 22.3 bits (46), Expect = 7.5, Method: Composition-based stats.
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 57 HPVDGPTSPGDGQLGLFFLKRNKTYKN 83
H V GPT D ++G+F+ T N
Sbjct: 169 HTVLGPTDGTDNRVGVFYHPTTTTKGN 195
>M.Javanica_Scaff522g007170 on AAL15422 MSA-2a2 (Invasion) [Babesia bovis]
Length = 292
Score = 22.3 bits (46), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 13/36 (36%)
Query: 36 PHVGGPTSPVDETTSPVGGPTHPVDGPTSPGDGQLG 71
P P P E+ S PT P P GQ G
Sbjct: 230 PAAPSPQGPTAESPSQADHPTKPTQTPEGNLQGQQG 265
>M.Javanica_Scaff522g007170 on AAL15421 MSA-2a1 (Invasion) [Babesia bovis]
Length = 316
Score = 21.9 bits (45), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 13/36 (36%)
Query: 36 PHVGGPTSPVDETTSPVGGPTHPVDGPTSPGDGQLG 71
P P P E+ S PT P P GQ G
Sbjct: 254 PAAPSPQGPTAESPSQADHPTKPTQTPEGNLQGQQG 289
>M.Javanica_Scaff522g007170 on ABA06450 MSA-2a1 (Invasion) [Babesia bovis]
Length = 316
Score = 21.9 bits (45), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 13/36 (36%)
Query: 36 PHVGGPTSPVDETTSPVGGPTHPVDGPTSPGDGQLG 71
P P P E+ S PT P P GQ G
Sbjct: 254 PAAPSPQGPTAESPSQADHPTKPTQTPEGNLQGQQG 289
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff30145g097162
(57 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351435 PfEMP1 (Establishment) [Plasmodium falciparum] 22 2.8
XP_803047 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 2.8
XP_001350582 PTRAMP (Adhesin) [Plasmodium falciparum] 21 6.7
XP_001351563 PfEMP1 (Establishment) [Plasmodium falciparum] 21 7.0
>M.Javanica_Scaff30145g097162 on XP_001351435 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2209
Score = 21.9 bits (45), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Query: 2 FANTPSGLLTIDEFNNV---DLEESEDPPAFQESK--KRMIEEEKRKRDEEKAADSA 53
+ T G+L I+ N D + S D Q K K++++EEK+K EE A
Sbjct: 733 YFTTLEGVLQIEFLNEGSAQDKQNSLDAKEIQHLKQIKKILDEEKQKNQEETAGGCG 789
>M.Javanica_Scaff30145g097162 on XP_803047 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 263
Score = 21.9 bits (45), Expect = 2.8, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 17 NVDLEESEDPPAFQESKKRMIEEEKRKRDEEKAADSA 53
+ DLEE PP+ + ++ ++ RK+ EE+ +A
Sbjct: 192 SADLEEDIAPPS-EAPVEQAASQQSRKKSEEQQVPAA 227
>M.Javanica_Scaff30145g097162 on XP_001350582 PTRAMP (Adhesin) [Plasmodium falciparum]
Length = 352
Score = 20.8 bits (42), Expect = 6.7, Method: Composition-based stats.
Identities = 12/25 (48%), Positives = 12/25 (48%)
Query: 9 LLTIDEFNNVDLEESEDPPAFQESK 33
L T D FN DLE E P F K
Sbjct: 163 LKTTDVFNTSDLEILEGPIQFSLGK 187
>M.Javanica_Scaff30145g097162 on XP_001351563 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2149
Score = 20.8 bits (42), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
Query: 26 PPAFQESKKRMIEEEKRKRDEEKAA 50
PP E K EE+K KRDEEK A
Sbjct: 1595 PPKVPEIPK---EEDKDKRDEEKPA 1616
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff25244g090611
(169 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_803413 VSG (Establishment) [Trypanosoma brucei] 25 2.6
>M.Javanica_Scaff25244g090611 on XP_803413 VSG (Establishment) [Trypanosoma brucei]
Length = 486
Score = 25.0 bits (53), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 87 AIAEICLNI---VKSRFHLTTQQKKRLLPYSEFVRSMSRVRSERGARHVINQKGGGVGVF 143
AI + C I + R H QQ + L +E + S S+V A+HV +KG +
Sbjct: 35 AITDACTEIRYMLNVRQHFD-QQIRNLAQAAEELHSQSKVLRLAAAKHVGTKKGLAYTLL 93
Query: 144 AAL 146
A L
Sbjct: 94 AGL 96
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2886g025851
(136 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349033 PfEMP1 (Establishment) [Plasmodium falciparum] 23 7.2
>M.Javanica_Scaff2886g025851 on XP_001349033 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2064
Score = 23.5 bits (49), Expect = 7.2, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 51 FVMIMNIKQRYKIENYLYNKNGSFRKLE---INPVKNVFNTI 89
F+M ++ + Y E Y YN N S ++ IN NV++ I
Sbjct: 1831 FIMSIHDRDLYSGEEYNYNVNMSTNSMDDIPINSHNNVYSGI 1872
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4770g036224
(152 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7g000170
(157 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6158g042718
(55 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001611736 variant erythrocyte surface antigen-1, alpha subun... 21 8.5
>M.Javanica_Scaff6158g042718 on XP_001611736 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1365
Score = 20.8 bits (42), Expect = 8.5, Method: Composition-based stats.
Identities = 6/10 (60%), Positives = 7/10 (70%)
Query: 34 LCRRCRCLKG 43
LC C C+KG
Sbjct: 204 LCNECECIKG 213
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4370g034250
(53 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6354g043557
(149 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_821146 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.9
>M.Javanica_Scaff6354g043557 on XP_821146 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 911
Score = 24.3 bits (51), Expect = 3.9, Method: Composition-based stats.
Identities = 10/14 (71%), Positives = 10/14 (71%)
Query: 23 FPSENTINEDEKEV 36
FP E T NEDEK V
Sbjct: 255 FPVEGTKNEDEKAV 268
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3488g029433
(83 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349207 EBA-175 (Adhesin) [Plasmodium falciparum] 22 7.1
AAL15422 MSA-2a2 (Invasion) [Babesia bovis] 22 8.4
>M.Javanica_Scaff3488g029433 on XP_001349207 EBA-175 (Adhesin) [Plasmodium falciparum]
Length = 1462
Score = 21.9 bits (45), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 34 FTSITESRDRDRESTPRPSLGSRPRVETESRDERLGGLS 72
TS TES D E TP S G + + + D+ L +S
Sbjct: 904 ITSPTESGSSDTEETPSISEGPKGNEQKKRDDDSLSKIS 942
>M.Javanica_Scaff3488g029433 on AAL15422 MSA-2a2 (Invasion) [Babesia bovis]
Length = 292
Score = 21.6 bits (44), Expect = 8.4, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Query: 45 RESTPRPSLGSRPRVETESRDERLGGLSPDIFPNPQ 80
+ES+P PS RP +++D G P+PQ
Sbjct: 203 QESSPAPSSPQRPAETQQTQDSTAPGTPAA--PSPQ 236
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3113g027225
(69 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAB63303 MIC2 (Invasion) [Toxoplasma gondii] 22 5.9
XP_001351321 PfEMP1 (Establishment) [Plasmodium falciparum] 22 6.4
>M.Javanica_Scaff3113g027225 on AAB63303 MIC2 (Invasion) [Toxoplasma gondii]
Length = 255
Score = 21.6 bits (44), Expect = 5.9, Method: Composition-based stats.
Identities = 7/14 (50%), Positives = 7/14 (50%)
Query: 53 GGWGWGGGCCGGGW 66
G W W GGGW
Sbjct: 16 GMWMWPSEVAGGGW 29
>M.Javanica_Scaff3113g027225 on XP_001351321 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3467
Score = 21.6 bits (44), Expect = 6.4, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 33 TEQIKGVNGEVPHGRHKRW 51
T+ I+ NG+ +GR+ W
Sbjct: 1585 TDYIEKCNGKYKYGRYPEW 1603
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff30427g097496
(213 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_808582 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.14
XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum] 29 0.21
XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum] 28 0.44
XP_811521 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.55
XP_810574 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.62
XP_816557 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.66
XP_813679 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.93
XP_001351221 CTRP (Adhesin) [Plasmodium falciparum] 27 1.0
Q6GV23 MPP1 (Protease) [Toxoplasma gondii] 27 1.1
XP_001611205 variant erythrocyte surface antigen-1, beta subuni... 27 1.5
XP_818470 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.5
XP_817877 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.9
XP_845134 VSG (Establishment) [Trypanosoma brucei] 26 2.2
XP_807454 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.4
>M.Javanica_Scaff30427g097496 on XP_808582 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 786
Score = 29.6 bits (65), Expect = 0.14, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 15/36 (41%)
Query: 135 PVVAAAPPPPPPPIPVAFYPPPPPLPPPIPAPIAPA 170
PV AP P +P P P +P P P AP
Sbjct: 690 PVPKRAPEPQVGGVPQTIAPAGPAVPGPREVPAAPG 725
Score = 27.7 bits (60), Expect = 0.56, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 4/34 (11%)
Query: 154 PPPPPLPPP----IPAPIAPAPMPIPAPYPVAAA 183
P P P P +P IAPA +P P V AA
Sbjct: 690 PVPKRAPEPQVGGVPQTIAPAGPAVPGPREVPAA 723
>M.Javanica_Scaff30427g097496 on XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3346
Score = 29.3 bits (64), Expect = 0.21, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 140 APPPPP-----PPIPVAFYPPPPPLPPPIP 164
+PPP P P+P+ +PPP PP P
Sbjct: 2237 SPPPNPDTQTDTPLPLESFPPPFCNVPPNP 2266
Score = 26.6 bits (57), Expect = 1.2, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 160 PPPIPAPIAPAPMPIPAPYPVAAAAIPSPC 189
PPP P P+P+ + P P+PC
Sbjct: 2238 PPPNPDTQTDTPLPLESFPPPFCNVPPNPC 2267
>M.Javanica_Scaff30427g097496 on XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1711
Score = 28.1 bits (61), Expect = 0.44, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 4/52 (7%)
Query: 112 PPELVQEGTVCVSRTIYGVVP----PPPVVAAAPPPPPPPIPVAFYPPPPPL 159
PP ++EG C + V+P P P V PP P P P P L
Sbjct: 1191 PPIEIEEGCTCKDPSPGEVIPEKKVPEPKVLPKPPKLPKRQPKERDFPTPAL 1242
>M.Javanica_Scaff30427g097496 on XP_811521 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 830
Score = 27.7 bits (60), Expect = 0.55, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Query: 61 MPVAALPPAPAVSAAPMPTGRLIPQALPG---APCEPGVECTGGSVCSQ 106
+PV P P V AP P +P A+PG P PG G + +Q
Sbjct: 732 IPVPKRAPEPQVKIAPKPVAPALP-AVPGPREVPAAPGRTTVGRTANTQ 779
Score = 26.2 bits (56), Expect = 1.7, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 148 IPVAFYPPPPPLPPPIPAPIAPAPMPIPAPYPVAAA 183
IPV P P + P P+APA +P P V AA
Sbjct: 732 IPVPKRAPEPQVKIA-PKPVAPALPAVPGPREVPAA 766
Score = 25.4 bits (54), Expect = 3.2, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 14/36 (38%)
Query: 135 PVVAAAPPPPPPPIPVAFYPPPPPLPPPIPAPIAPA 170
PV AP P P P P +P P P AP
Sbjct: 733 PVPKRAPEPQVKIAPKPVAPALPAVPGPREVPAAPG 768
>M.Javanica_Scaff30427g097496 on XP_810574 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 954
Score = 27.7 bits (60), Expect = 0.62, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 4/64 (6%)
Query: 131 VPPP---PVVAAAPPPPPPPIPVAFYPPPPPLPPPIPAPIAPAPMPIPAPYPVAAAAIPS 187
+PPP PV A A PP+ + P +P+P P P + +++PS
Sbjct: 725 IPPPERKPVPAKALTTTSPPVEPLTTSVTTEMQPTVPSPATAGPQPTEQA-TLNGSSVPS 783
Query: 188 PCIP 191
P
Sbjct: 784 GGAP 787
>M.Javanica_Scaff30427g097496 on XP_816557 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 834
Score = 27.3 bits (59), Expect = 0.66, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Query: 61 MPVAALPPAPAVSAAPMPTGRLIPQALPG---APCEPGVECTGGSVCSQ 106
+PV P P V AP P +P A+PG P PG G + +Q
Sbjct: 736 IPVPKRAPEPQVKIAPKPVAPALP-AVPGPREVPAAPGRTTVGRTANNQ 783
Score = 26.2 bits (56), Expect = 1.6, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 148 IPVAFYPPPPPLPPPIPAPIAPAPMPIPAPYPVAAA 183
IPV P P + P P+APA +P P V AA
Sbjct: 736 IPVPKRAPEPQVKIA-PKPVAPALPAVPGPREVPAA 770
Score = 25.4 bits (54), Expect = 3.2, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 14/36 (38%)
Query: 135 PVVAAAPPPPPPPIPVAFYPPPPPLPPPIPAPIAPA 170
PV AP P P P P +P P P AP
Sbjct: 737 PVPKRAPEPQVKIAPKPVAPALPAVPGPREVPAAPG 772
>M.Javanica_Scaff30427g097496 on XP_813679 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 823
Score = 26.9 bits (58), Expect = 0.93, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
Query: 154 PPPPPLPPP----IPAPIAPAPMPIPAPYPVAAA 183
P P P P +P P+APA +P P + AA
Sbjct: 726 PVPKRAPEPQVKIVPNPVAPAVSAVPGPRELPAA 759
>M.Javanica_Scaff30427g097496 on XP_001351221 CTRP (Adhesin) [Plasmodium falciparum]
Length = 2112
Score = 26.9 bits (58), Expect = 1.0, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 26/68 (38%), Gaps = 5/68 (7%)
Query: 44 GAVGPATCGPLPAGCAAMPVAALPPAPAVSAAPMPTGRLIPQALPGAPCEPGVECTGGSV 103
G+ +T G P + P +P+ S P+ ++ PG+P E S
Sbjct: 780 GSPSESTPGSPSESTPGNPSESTPGSPSESTPGNPS-----ESTPGSPSESTPGSPSEST 834
Query: 104 CSQGICLC 111
G CLC
Sbjct: 835 PCSGTCLC 842
>M.Javanica_Scaff30427g097496 on Q6GV23 MPP1 (Protease) [Toxoplasma gondii]
Length = 255
Score = 26.6 bits (57), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 97 ECTGGSVCSQGICLCPPELVQEGTVC 122
E G SVC QG E ++EGT
Sbjct: 195 ETAGSSVCGQGSHARTAEKLEEGTAS 220
>M.Javanica_Scaff30427g097496 on XP_001611205 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1146
Score = 26.6 bits (57), Expect = 1.5, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 24/58 (41%)
Query: 76 PMPTGRLIPQALPGAPCEPGVECTGGSVCSQGICLCPPELVQEGTVCVSRTIYGVVPP 133
P+P G + G+P CTG ++ C P+ Q GT+ V + + P
Sbjct: 735 PVPMGWKDKEHFKGSPGTYPAHCTGRTLSHLLEYYCDPDRCQSGTLVVLLRLMACITP 792
>M.Javanica_Scaff30427g097496 on XP_818470 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 868
Score = 26.2 bits (56), Expect = 1.5, Method: Composition-based stats.
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 151 AFYPPPPPLPPPIPAPIA 168
A P PP+P P+ PIA
Sbjct: 734 ALKPNKPPIPSPVNTPIA 751
>M.Javanica_Scaff30427g097496 on XP_817877 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 900
Score = 26.2 bits (56), Expect = 1.9, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 113 PELVQEGTVCVSRTIYGVVPP-PPVVAAAPPPPPPPIP 149
P LV+E T ++ + VV P PPVVA A P P
Sbjct: 731 PSLVKEPTKPLTVSSASVVTPTPPVVATAQITETPSTP 768
>M.Javanica_Scaff30427g097496 on XP_845134 VSG (Establishment) [Trypanosoma brucei]
Length = 486
Score = 25.8 bits (55), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 19/46 (41%)
Query: 137 VAAAPPPPPPPIPVAFYPPPPPLPPPIPAPIAPAPMPIPAPYPVAA 182
++A P PV + PP P P IP P + Y +AA
Sbjct: 244 ISADPSAKATAEPVQLHKPPGPGPNCIPEPDTKEQIITNNDYVIAA 289
>M.Javanica_Scaff30427g097496 on XP_807454 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 825
Score = 25.8 bits (55), Expect = 2.4, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 6/40 (15%)
Query: 63 VAALPPAPAVSAAPMPTGRLIPQALPGAPCEPGVECTGGS 102
+A +P AP VSA P P+ LP AP V T +
Sbjct: 740 IAPIPIAPTVSAVPG------PRELPAAPGRTTVGTTANT 773
Score = 25.0 bits (53), Expect = 4.1, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 4/34 (11%)
Query: 154 PPPPPLPPP----IPAPIAPAPMPIPAPYPVAAA 183
P P P P P PIAP +P P + AA
Sbjct: 728 PVPKRAPEPQVKIAPIPIAPTVSAVPGPRELPAA 761
Score = 24.3 bits (51), Expect = 6.4, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 14/36 (38%)
Query: 135 PVVAAAPPPPPPPIPVAFYPPPPPLPPPIPAPIAPA 170
PV AP P P+ P +P P P AP
Sbjct: 728 PVPKRAPEPQVKIAPIPIAPTVSAVPGPRELPAAPG 763
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff276g004300
(81 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351877 PfEMP1 (Establishment) [Plasmodium falciparum] 24 1.3
>M.Javanica_Scaff276g004300 on XP_001351877 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2270
Score = 23.9 bits (50), Expect = 1.3, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 31 ISKDLPERNTQNINKRNEKHKGDHDDLNYRRGYSRFEEDT 70
I KD+ E+ E+ KGD + N R +R+ DT
Sbjct: 23 IGKDVHEKAKSEAKNYIEELKGDLNTANGRSSETRYTTDT 62
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff743g009492
(125 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5457g039547
(80 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_810237 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.3
XP_804142 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.3
XP_808402 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 6.5
XP_805336 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 7.9
XP_804407 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 8.2
XP_817994 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 8.2
XP_817721 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 9.7
>M.Javanica_Scaff5457g039547 on XP_810237 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 922
Score = 22.3 bits (46), Expect = 5.3, Method: Composition-based stats.
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 18 VNFLIYSKNNTKSNNVNLWVS 38
V +YSK N + ++LW++
Sbjct: 379 VTLPVYSKENVEKGELHLWLT 399
>M.Javanica_Scaff5457g039547 on XP_804142 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 928
Score = 22.3 bits (46), Expect = 5.3, Method: Composition-based stats.
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 18 VNFLIYSKNNTKSNNVNLWVS 38
V +YSK N + ++LW++
Sbjct: 384 VTLPVYSKENVEKGELHLWLT 404
>M.Javanica_Scaff5457g039547 on XP_808402 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 846
Score = 21.9 bits (45), Expect = 6.5, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 15/21 (71%)
Query: 18 VNFLIYSKNNTKSNNVNLWVS 38
V+ +IYSK+ +S ++ W+S
Sbjct: 285 VSLIIYSKDTAESWKLSKWMS 305
>M.Javanica_Scaff5457g039547 on XP_805336 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 931
Score = 21.6 bits (44), Expect = 7.9, Method: Composition-based stats.
Identities = 6/21 (28%), Positives = 14/21 (66%)
Query: 18 VNFLIYSKNNTKSNNVNLWVS 38
V +Y++N+ K ++LW++
Sbjct: 380 VTLPVYAENDNKKGKLHLWLT 400
>M.Javanica_Scaff5457g039547 on XP_804407 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 928
Score = 21.6 bits (44), Expect = 8.2, Method: Composition-based stats.
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 22 IYSKNNTKSNNVNLWVS 38
+YSK N + ++LW++
Sbjct: 388 VYSKENVEKGELHLWLT 404
>M.Javanica_Scaff5457g039547 on XP_817994 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 954
Score = 21.6 bits (44), Expect = 8.2, Method: Composition-based stats.
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 22 IYSKNNTKSNNVNLWVS 38
+YSK N + ++LW++
Sbjct: 395 VYSKENVEKGELHLWLT 411
>M.Javanica_Scaff5457g039547 on XP_817721 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 922
Score = 21.6 bits (44), Expect = 9.7, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 18 VNFLIYSKNNTKSNNVNLWVSAR-RLCKIPRFARDFAACAS 57
V +YS+N + ++LW++ + I + + D AA +S
Sbjct: 380 VTLPVYSENGNEKGELHLWLTDNTHIVDIGQVSGDDAAASS 420
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2550g023672
(56 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3250g028062
(463 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_814930 Trans-sialidase (Invasion) [Trypanosoma cruzi] 39 5e-04
XP_803096 Trans-sialidase (Invasion) [Trypanosoma cruzi] 33 0.045
XP_001349533 PfEMP3 (Establishment) [Plasmodium falciparum] 32 0.10
XP_814919 Trans-sialidase (Invasion) [Trypanosoma cruzi] 32 0.11
XP_818396 Trans-sialidase (Invasion) [Trypanosoma cruzi] 31 0.15
XP_814927 Trans-sialidase (Invasion) [Trypanosoma cruzi] 31 0.19
>M.Javanica_Scaff3250g028062 on XP_814930 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 938
Score = 39.3 bits (90), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 12/132 (9%)
Query: 25 KAEDEEEDKEGGDDGGGDGDDDKEEGEEEKEEKSGKGEDEEEEGDGEDEEEKNGDKEEDG 84
K E EDK+ + G GD +D KE G+ E +++SG ED++ GD E DK+E G
Sbjct: 756 KMIKEVEDKK--EKGSGDSEDKKESGDSEDKKESGDSEDKKGSGDSE-------DKKESG 806
Query: 85 EDEEDKEGNDDEDGDKEKGEEEDDDEAQSKSSKSSKSKSVKKRKRGDKDNEEESENDEAE 144
+ E+ KE D ED K G+ + ++ +++ ++V + G + +E D +
Sbjct: 807 DSEDKKESGDSED-KKGSGDGAFTPAVSNATTHTAEEETVNQSASGTFSITDSTEGDVSS 865
Query: 145 SEVDNGSDEEGS 156
E NG G+
Sbjct: 866 DE--NGETTGGA 875
>M.Javanica_Scaff3250g028062 on XP_803096 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 753
Score = 32.7 bits (73), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 39 GGGDGDDDKEEGEEEKEEKSGKGEDEEEEGDGEDEE 74
G GDG+D K G+ E ++ SG GED++ GDG E
Sbjct: 700 GSGDGEDKKGSGDGEDKKGSGDGEDKKRSGDGSMRE 735
>M.Javanica_Scaff3250g028062 on XP_001349533 PfEMP3 (Establishment) [Plasmodium falciparum]
Length = 2441
Score = 31.6 bits (70), Expect = 0.10, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 70/156 (44%), Gaps = 8/156 (5%)
Query: 27 EDEEEDKEGGDDGGGDGDDDKEEGEEEKEEKSGKGEDEEEEGDGEDEEEKNGDKEEDGED 86
E E D G + ++ EE EE+ K+ + +++ +G E+ E KN + G D
Sbjct: 1033 EYNETDLAKGKEVTNKARENLEEYEEKDYMKNNELQNKGSDGLKENAELKNKELRNKGSD 1092
Query: 87 --EEDKEGNDDE------DGDKEKGEEEDDDEAQSKSSKSSKSKSVKKRKRGDKDNEEES 138
+E+ E + E DG KE E ++ + S ++ +K ++ +K +E
Sbjct: 1093 GLKENAELKNKELRNKGSDGLKENAELKNKELQNKGSEGLKENAELKNKELQNKGSEGLK 1152
Query: 139 ENDEAESEVDNGSDEEGSREHKRAKNRRYICQDKDG 174
EN E +++ EG +E+ KN+ + +G
Sbjct: 1153 ENAELKNKELRNKGSEGLKENAELKNKELQNKGSEG 1188
Score = 30.4 bits (67), Expect = 0.27, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 65/142 (45%), Gaps = 1/142 (0%)
Query: 25 KAEDEEEDKEGGDDGGGDGDDDKEEGEEEKEEKSGKGEDEEEEGDGEDEEEKNGDKEEDG 84
K E ++KE + G ++ E +E + K +G E E ++ + K + ++
Sbjct: 1095 KENAELKNKELRNKGSDGLKENAELKNKELQNKGSEGLKENAELKNKELQNKGSEGLKEN 1154
Query: 85 EDEEDKE-GNDDEDGDKEKGEEEDDDEAQSKSSKSSKSKSVKKRKRGDKDNEEESENDEA 143
+ ++KE N +G KE E ++ + S ++ +K ++ +K +E EN E
Sbjct: 1155 AELKNKELRNKGSEGLKENAELKNKELQNKGSEGLKENAELKNKELQNKGSEGLKENAEL 1214
Query: 144 ESEVDNGSDEEGSREHKRAKNR 165
+++ EG +E+ KN+
Sbjct: 1215 KNKELQNKGSEGLKENAELKNK 1236
Score = 29.3 bits (64), Expect = 0.58, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 66/151 (43%), Gaps = 1/151 (0%)
Query: 25 KAEDEEEDKEGGDDGGGDGDDDKEEGEEEKEEKSGKGEDEEEEGDGEDEEEKNGDKEEDG 84
K E ++KE + G ++ E +E K G E E ++ + K + ++
Sbjct: 1076 KENAELKNKELRNKGSDGLKENAELKNKELRNKGSDGLKENAELKNKELQNKGSEGLKEN 1135
Query: 85 EDEEDKE-GNDDEDGDKEKGEEEDDDEAQSKSSKSSKSKSVKKRKRGDKDNEEESENDEA 143
+ ++KE N +G KE E ++ + S ++ +K ++ +K +E EN E
Sbjct: 1136 AELKNKELQNKGSEGLKENAELKNKELRNKGSEGLKENAELKNKELQNKGSEGLKENAEL 1195
Query: 144 ESEVDNGSDEEGSREHKRAKNRRYICQDKDG 174
+++ EG +E+ KN+ + +G
Sbjct: 1196 KNKELQNKGSEGLKENAELKNKELQNKGSEG 1226
Score = 27.7 bits (60), Expect = 1.7, Method: Composition-based stats.
Identities = 30/148 (20%), Positives = 65/148 (43%), Gaps = 1/148 (0%)
Query: 25 KAEDEEEDKEGGDDGGGDGDDDKEEGEEEKEEKSGKGEDEEEEGDGEDEEEKNGDKEEDG 84
K E ++KE + G ++ E +E K +G E E ++ + K + ++
Sbjct: 1133 KENAELKNKELQNKGSEGLKENAELKNKELRNKGSEGLKENAELKNKELQNKGSEGLKEN 1192
Query: 85 EDEEDKE-GNDDEDGDKEKGEEEDDDEAQSKSSKSSKSKSVKKRKRGDKDNEEESENDEA 143
+ ++KE N +G KE E ++ + S ++ +K ++ +K +E EN
Sbjct: 1193 AELKNKELQNKGSEGLKENAELKNKELQNKGSEGLKENAELKNKELRNKGSEGLKENVYT 1252
Query: 144 ESEVDNGSDEEGSREHKRAKNRRYICQD 171
+++ N + +K KN+ + +D
Sbjct: 1253 NNDLKNNDIQNKDLSNKDMKNKELLNKD 1280
>M.Javanica_Scaff3250g028062 on XP_814919 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 854
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 31 EDKEGGDDGGG-----DGDDDKEEGEEEKEEKSGKGEDEEEEGDGEDEE 74
EDK+G DG G DGDD K G+ E ++ G ED++ GDG E
Sbjct: 788 EDKKGSGDGEGKKGIRDGDDKKGSGDSEDKKGIGGAEDKKGSGDGSMRE 836
Score = 30.0 bits (66), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 41 GDGDDDKEEGEEEKEEKSGKGEDEEEEGDGEDEEEKN---GDKEEDGEDEEDKEG 92
G GDD K G E +K G G E+++G G+ E +K GD ++ D EDK+G
Sbjct: 767 GSGDDKKGSGGSE--DKKGIGGAEDKKGSGDGEGKKGIRDGDDKKGSGDSEDKKG 819
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 55 EEKSGKGEDEEEEGDGEDEEEKNGDKEEDGE-DEEDKEGNDDEDGDKEKGEEED 107
E+K G G+D++ G ED++ G +++ G D E K+G D D K G+ ED
Sbjct: 763 EDKKGSGDDKKGSGGSEDKKGIGGAEDKKGSGDGEGKKGIRDGDDKKGSGDSED 816
>M.Javanica_Scaff3250g028062 on XP_818396 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1044
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 14/128 (10%)
Query: 39 GGGDGDDDKEEGEEEKEEKSGK------GEDEEEEGDGEDEEEKNGDKEEDGEDEEDKEG 92
GG G+D G + + GK GED E G + + K K G ED +
Sbjct: 857 GGSAGEDSDSSGAADTDSAKGKATGSSAGEDGESSGAADTDSAKG--KATGGSAGEDSDS 914
Query: 93 NDDEDGDKEKGEE------EDDDEAQSKSSKSSKSKSVKKRKRGDKDNEEESENDEAESE 146
+ D D KG+ ED D + + + S+K K++ D D+ ++ D A+ +
Sbjct: 915 SGAADTDSAKGKATGGSAGEDSDSSGAADTDSAKVKAIGSSAGEDSDSSGAADTDSAKVK 974
Query: 147 VDNGSDEE 154
S E
Sbjct: 975 ATGSSAGE 982
Score = 30.0 bits (66), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 59/141 (41%), Gaps = 14/141 (9%)
Query: 36 GDDGGGDGDDDKEEGEEEKEEKSGKGEDEEEEGDGEDEEEKNGDKEEDGEDEEDKEGNDD 95
G+DG G D + + K S GED E G + + K K G ED + +
Sbjct: 741 GEDGESSGAADTDS-AKVKAIGSSAGEDGESSGAADTDSAKG--KATGGSAGEDSDSSGA 797
Query: 96 EDGDKEKGEE------EDDDEAQSKSSKSSKSKSVKKRKRGDKDNEEESENDEAESEVDN 149
D D KG+ ED + + + + S+K K++ D D+ ++ D A+ +
Sbjct: 798 ADTDSAKGKATGGSAGEDGESSGAADTDSAKVKAIGSSAGEDSDSSGAADTDSAKGKATG 857
Query: 150 G-----SDEEGSREHKRAKNR 165
G SD G+ + AK +
Sbjct: 858 GSAGEDSDSSGAADTDSAKGK 878
Score = 28.9 bits (63), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 59/153 (38%), Gaps = 23/153 (15%)
Query: 23 TAKAEDEEEDKEGGDD---------GGGDGDDDKEEGEEE------KEEKSGKGEDEEEE 67
T + E+ D G D GG G+D + G + K S GED +
Sbjct: 784 TGGSAGEDSDSSGAADTDSAKGKATGGSAGEDGESSGAADTDSAKVKAIGSSAGEDSDSS 843
Query: 68 GDGEDEEEKNGDKEEDGEDEEDKEGNDDEDGDKEKGEE------EDDDEAQSKSSKSSKS 121
G + + K K G ED + + D D KG+ ED + + + + S+K
Sbjct: 844 GAADTDSAKG--KATGGSAGEDSDSSGAADTDSAKGKATGSSAGEDGESSGAADTDSAKG 901
Query: 122 KSVKKRKRGDKDNEEESENDEAESEVDNGSDEE 154
K+ D D+ ++ D A+ + GS E
Sbjct: 902 KATGGSAGEDSDSSGAADTDSAKGKATGGSAGE 934
>M.Javanica_Scaff3250g028062 on XP_814927 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 759
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 25 KAEDEEEDKEGGDDGGGDGDDDKEEGEEEKEEKSGKGEDEEEEGDGEDEE 74
K E EDK+ + G GD +D KE G+ E +++SG ED++ GDG E
Sbjct: 692 KMIKEVEDKK--EKGSGDSEDKKESGDSEDKKESGDSEDKKGSGDGSMRE 739
Score = 29.6 bits (65), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 8/48 (16%)
Query: 48 EEGEEEKEEKSGKGEDEEEEGDGEDEEEKNGDKEEDGEDEEDKEGNDD 95
+E E++KE+ SG ED++E GD ED++E D EDK+G+ D
Sbjct: 695 KEVEDKKEKGSGDSEDKKESGDSEDKKESG--------DSEDKKGSGD 734
Score = 26.6 bits (57), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 5/36 (13%)
Query: 62 EDEEEEGDGEDEEEKNGDKEEDGEDEEDKEGNDDED 97
ED++E+G G+ E DK+E G+ E+ KE D ED
Sbjct: 698 EDKKEKGSGDSE-----DKKESGDSEDKKESGDSED 728
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2959g026304
(140 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_821909 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.77
XP_845640 VSG (Establishment) [Trypanosoma brucei] 25 1.4
XP_821078 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.5
XP_805733 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.0
AAB86482 RabA (Invasion) [Entamoeba histolytica] 24 2.6
XP_818892 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.0
XP_829790 VSG (Establishment) [Trypanosoma brucei] 24 3.3
XP_818893 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.4
XP_814219 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.4
>M.Javanica_Scaff2959g026304 on XP_821909 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 954
Score = 26.2 bits (56), Expect = 0.77, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 29 VESQYVSEESGQEEYEIVSDEGGLDENVDGSSNLNWNWNRTGGETPVFGGNTNNNFPFRY 88
V + V +S ++ S +G + NVD SS+ N GG+T GN + P
Sbjct: 800 VTTSSVGSQSAEQLASGGSHDGNKNVNVDSSSDGNPAVGTVGGDTT--QGNESPQIPVGI 857
Query: 89 ADKAD 93
+D AD
Sbjct: 858 SDTAD 862
>M.Javanica_Scaff2959g026304 on XP_845640 VSG (Establishment) [Trypanosoma brucei]
Length = 145
Score = 25.0 bits (53), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 22/47 (46%)
Query: 76 FGGNTNNNFPFRYADKADEHYYKSFERDLHEQEEIHIENKLPENDEK 122
+GG +++ P + +DK K RD ++ E+K DEK
Sbjct: 60 WGGKKDDDGPCQASDKQVSEQTKQGGRDTTTGGDVKKEDKCTGKDEK 106
>M.Javanica_Scaff2959g026304 on XP_821078 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 940
Score = 25.4 bits (54), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 47 SDEGGLDENVDGSSNLNWNWNRTGGETPVFGGNTNNNFPFRYADKAD 93
S +G + NVD SSN N GG+T GN + P +D AD
Sbjct: 804 SHDGNKNVNVDSSSNGNPAVGTVGGDTTQ--GNGSPQIPVGISDTAD 848
>M.Javanica_Scaff2959g026304 on XP_805733 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 823
Score = 25.0 bits (53), Expect = 2.0, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Query: 22 HLSYDDDVESQYVSEESGQEEYEIVSDEGGLDENVDGSSNLNWNWNRTGGETPVFGGNTN 81
H + D + E G + S E G +V GS+ WNW G P G+++
Sbjct: 248 HQTVSDGCRDPTIVEWGGGRFLMMASCEQGY-RDVCGSTESGWNWYPYGETLPRVWGDSH 306
Query: 82 N 82
N
Sbjct: 307 N 307
>M.Javanica_Scaff2959g026304 on AAB86482 RabA (Invasion) [Entamoeba histolytica]
Length = 219
Score = 24.3 bits (51), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Query: 97 YKSFERDLHEQEEIHIENKLPENDEKKLQEEEEDCDCGCGC 137
+ R + + I ++ P +E K+ ++ ED D GC C
Sbjct: 182 FSQLLRSIINLKPIFVD---PGEEEVKITQQTEDTDGGCVC 219
>M.Javanica_Scaff2959g026304 on XP_818892 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 956
Score = 24.6 bits (52), Expect = 3.0, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 55 NVDGSSNLNWNWNRTGGETPVFGGNTNNNFPFRYADKAD 93
NVD SSN N GG+T GN + P +D AD
Sbjct: 828 NVDSSSNGNPAVGTVGGDTK--QGNGSPQIPVGISDTAD 864
>M.Javanica_Scaff2959g026304 on XP_829790 VSG (Establishment) [Trypanosoma brucei]
Length = 468
Score = 24.3 bits (51), Expect = 3.3, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 10/49 (20%)
Query: 91 KADEHYYKSFERDLHEQ-----EEIHIE-----NKLPENDEKKLQEEEE 129
K+ EH+ + + +Q EE+ + N+LP+ D K+ QEE+E
Sbjct: 354 KSYEHHIQILQEQAWQQYIGAEEELELRAKKIINQLPKTDPKQKQEEDE 402
>M.Javanica_Scaff2959g026304 on XP_818893 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 956
Score = 24.3 bits (51), Expect = 3.4, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 55 NVDGSSNLNWNWNRTGGETPVFGGNTNNNFPFRYADKAD 93
NVD SSN N GG+T GN + P +D AD
Sbjct: 828 NVDSSSNGNPAVGTVGGDTK--QGNGSPQIPVGISDTAD 864
>M.Javanica_Scaff2959g026304 on XP_814219 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 958
Score = 24.3 bits (51), Expect = 3.4, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 55 NVDGSSNLNWNWNRTGGETPVFGGNTNNNFPFRYADKAD 93
NVD SSN N GG+T GN + P +D AD
Sbjct: 830 NVDSSSNGNPAVGTVGGDTK--QGNGSPQIPVGISDTAD 866
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3834g031445
(139 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4448g034652
(120 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_809996 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.6
XP_808396 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.6
XP_001609101 variant erythrocyte surface antigen-1, alpha subun... 23 5.8
>M.Javanica_Scaff4448g034652 on XP_809996 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 787
Score = 24.3 bits (51), Expect = 2.6, Method: Composition-based stats.
Identities = 10/39 (25%), Positives = 20/39 (51%)
Query: 69 CGEQRKESLNRKESMMAFRRPSSFSPANAQRHHIPLSRR 107
CG +ES +++ + RP + + A + IP+ +R
Sbjct: 661 CGGHEQESHATVTNVLLYNRPLNPTEMTAIKERIPVPKR 699
>M.Javanica_Scaff4448g034652 on XP_808396 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 786
Score = 24.3 bits (51), Expect = 2.6, Method: Composition-based stats.
Identities = 10/39 (25%), Positives = 20/39 (51%)
Query: 69 CGEQRKESLNRKESMMAFRRPSSFSPANAQRHHIPLSRR 107
CG +ES +++ + RP + + A + IP+ +R
Sbjct: 660 CGGHEQESHATVTNVLLYNRPLNPTEMTAIKERIPVPKR 698
>M.Javanica_Scaff4448g034652 on XP_001609101 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1359
Score = 23.1 bits (48), Expect = 5.8, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 96 NAQRHHIPLSRRCTALSQSSAA 117
NA PL R+CT S S ++
Sbjct: 172 NADNEGTPLGRKCTRCSDSGSS 193
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff697g009018
(60 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_804501 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.3
>M.Javanica_Scaff697g009018 on XP_804501 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 422
Score = 23.1 bits (48), Expect = 1.3, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 3/29 (10%)
Query: 11 LDQVLLSSSVNLAQRKPKWRTVFSNKTCS 39
+ QVL+ S N KW TVF KT +
Sbjct: 284 VSQVLIGVSYNTGG---KWETVFKGKTTT 309
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4325g034019
(61 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_827749 VSG (Establishment) [Trypanosoma brucei] 22 3.8
AAM47174 Rh4 (Adhesin) [Plasmodium falciparum] 21 6.9
AAM47192 Rh4 (Adhesin) [Plasmodium falciparum] 21 6.9
AAM47175 Rh4 (Adhesin) [Plasmodium falciparum] 21 7.0
>M.Javanica_Scaff4325g034019 on XP_827749 VSG (Establishment) [Trypanosoma brucei]
Length = 516
Score = 21.9 bits (45), Expect = 3.8, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 12 LSWQRLTGHIINAVLACTSTIKAFIRNFHSSHEQVYADSEN 52
L +R T INA A S +K I + S + Y D N
Sbjct: 311 LQKKRRTNQEINADSALESKVKGIIGSDADSFKNTYLDKVN 351
>M.Javanica_Scaff4325g034019 on AAM47174 Rh4 (Adhesin) [Plasmodium falciparum]
Length = 1711
Score = 21.2 bits (43), Expect = 6.9, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 19 GHIINAVLACTSTIKAFIRNFHSSH 43
G I +L C+ST FI+N + H
Sbjct: 1631 GGITAVLLLCSSTAFFFIKNSNEPH 1655
>M.Javanica_Scaff4325g034019 on AAM47192 Rh4 (Adhesin) [Plasmodium falciparum]
Length = 1716
Score = 21.2 bits (43), Expect = 6.9, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 19 GHIINAVLACTSTIKAFIRNFHSSH 43
G I +L C+ST FI+N + H
Sbjct: 1632 GGITAVLLLCSSTAFFFIKNSNEPH 1656
>M.Javanica_Scaff4325g034019 on AAM47175 Rh4 (Adhesin) [Plasmodium falciparum]
Length = 1711
Score = 21.2 bits (43), Expect = 7.0, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 19 GHIINAVLACTSTIKAFIRNFHSSH 43
G I +L C+ST FI+N + H
Sbjct: 1633 GGITAVLLLCSSTAFFFIKNSNEPH 1657
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3293g028330
(135 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_828098 VSG (Establishment) [Trypanosoma brucei] 24 3.3
XP_001610497 variant erythrocyte surface antigen-1, alpha subun... 23 5.7
>M.Javanica_Scaff3293g028330 on XP_828098 VSG (Establishment) [Trypanosoma brucei]
Length = 474
Score = 24.3 bits (51), Expect = 3.3, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
Query: 101 ACERMSRLHNGG--PNGCSLARTDVYWNAVK 129
A + M H G P C L T V WNA K
Sbjct: 218 ASDMMCLCHGTGVTPQDCGLTVTAVQWNAAK 248
>M.Javanica_Scaff3293g028330 on XP_001610497 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1315
Score = 23.5 bits (49), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 12/45 (26%), Positives = 19/45 (42%)
Query: 63 DCGTPGLRSGESTEDGWKRCALDYGCSVQCIRCNKPISACERMSR 107
D G GL+ + T G + LD S +C+ C C + +
Sbjct: 795 DAGASGLKENKETLLGAIKDMLDMVSSTRCVHCKDHKDKCGKTPK 839
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff8211g051116
(177 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAK49430 gp63 (Invasion) [Leishmania donovani] 25 1.7
>M.Javanica_Scaff8211g051116 on AAK49430 gp63 (Invasion) [Leishmania donovani]
Length = 255
Score = 25.4 bits (54), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 26 LDNYIIGTPKVVCEETEVAMDIVTAKPFIGNIFVKG 61
++ I P + C E EV M T++ +G ++G
Sbjct: 112 MERNITKWPAMFCNENEVTMRCPTSRLMVGTCGIRG 147
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2521g023504
(149 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_821146 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.47
XP_820143 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.55
XP_805213 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.61
XP_829763 VSG (Establishment) [Trypanosoma brucei] 27 0.64
XP_819146 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.70
XP_001349035 PfEMP1 (Establishment) [Plasmodium falciparum] 27 0.71
AAM47192 Rh4 (Adhesin) [Plasmodium falciparum] 26 0.88
AAM47174 Rh4 (Adhesin) [Plasmodium falciparum] 26 0.90
XP_821703 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.95
AAM47175 Rh4 (Adhesin) [Plasmodium falciparum] 26 1.1
XP_812339 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.8
XP_814896 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.3
XP_001609602 SBP2 (Others) [Babesia bovis] 25 2.4
XP_809850 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.8
XP_822006 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.0
XP_818708 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.1
XP_816886 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.4
XP_818346 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.7
XP_804105 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.7
XP_804836 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.5
XP_808217 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 6.0
XP_817875 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 6.3
XP_001610720 variant erythrocyte surface antigen-1, beta subuni... 23 6.4
XP_814555 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 6.6
XP_812311 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 7.1
XP_819341 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 7.2
XP_001350409 PfEMP1 (Establishment) [Plasmodium falciparum] 23 7.9
XP_817007 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 7.9
XP_806901 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 8.3
XP_001608664 variant erythrocyte surface antigen-1, beta subuni... 23 8.3
XP_805336 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 8.7
>M.Javanica_Scaff2521g023504 on XP_821146 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 911
Score = 26.9 bits (58), Expect = 0.47, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Query: 84 IDCVYSATNSAACGVELKDSQEYLLFGRYGDDGKKKISLCGF--NREWEKVTEKLK 137
ID V ++ N G + E +FG D KK+I CG N+E +EK K
Sbjct: 586 IDKVPTSGNIPLMGARWEGPGEKKVFGLSYDSEKKRIVFCGGGQNKELSSTSEKKK 641
>M.Javanica_Scaff2521g023504 on XP_820143 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 869
Score = 26.9 bits (58), Expect = 0.55, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
Query: 97 GVELKDSQEYLLFGRYGDDGKKKISLCGFNREWEKVTEKLKKFLKDG 143
GV++K++ +L G D GKK LCG +K T KL + G
Sbjct: 596 GVKMKNAGNSVLLGLSYDSGKKWHVLCG-----DKTTTKLSSTWETG 637
>M.Javanica_Scaff2521g023504 on XP_805213 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 338
Score = 26.6 bits (57), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 97 GVELKDSQEYLLFGRYGDDGKKKISLCGFNREWEKVTEKLKK 138
G ++ D + LL Y + GKK + LCG + E+++ LK
Sbjct: 116 GAKMNDGKTVLLGLSYNNKGKKWMLLCGGGTKSEELSSPLKP 157
>M.Javanica_Scaff2521g023504 on XP_829763 VSG (Establishment) [Trypanosoma brucei]
Length = 476
Score = 26.6 bits (57), Expect = 0.64, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Query: 53 RDKEGKAS-EYEYTVKLLKTFKDNKTC--NQNNKIDCVYSATNSAACGVELKDSQEYLLF 109
R+KE K + Y + K +KT N N CV + T + AC D +L+
Sbjct: 175 RNKEAKVKVKNAYPITFYHATKADKTSGTNGNGPRACVRADTLTTACATSSSDQTNFLIT 234
Query: 110 G 110
G
Sbjct: 235 G 235
>M.Javanica_Scaff2521g023504 on XP_819146 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 825
Score = 26.6 bits (57), Expect = 0.70, Method: Composition-based stats.
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 13 TNLWGILFTNGCYCGKMSEEEKYCNSD 39
T+ WG+L G G + EE++ C +D
Sbjct: 181 TDHWGLLLVKGQVSGAVEEEKRICWND 207
>M.Javanica_Scaff2521g023504 on XP_001349035 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2239
Score = 26.6 bits (57), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 71 TFKDNKTCNQNNKIDCVYSATNSAACGVELKDSQEYLLFGRY--GDDGKKKISLCGFNRE 128
T K+ KTCN+N+K DC G E + +++ +Y GDD K K+ + F +
Sbjct: 1500 TQKEGKTCNENSKNDCACVGKWVQQKGKEWESIKDHFQKRQYGNGDDIKSKVKM--FLEK 1557
Query: 129 WEKVTEKLKKFLK 141
+ +TE L K +K
Sbjct: 1558 LQSLTE-LNKIMK 1569
>M.Javanica_Scaff2521g023504 on AAM47192 Rh4 (Adhesin) [Plasmodium falciparum]
Length = 1716
Score = 26.2 bits (56), Expect = 0.88, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 6/64 (9%)
Query: 18 ILFTNGCYCGKMSEEEKYCNSDWVAYVKSLRRGEVRDKEGKASEYEYTVKLLKTFKDNKT 77
I F N K+ E K + ++ ++ S + A EYEY +K TFK +T
Sbjct: 356 IYFINKHIVNKIQENFKLNQNKYIHFINS------NNAVNAAKEYEYIIKYYTTFKYLQT 409
Query: 78 CNQN 81
N++
Sbjct: 410 LNKS 413
>M.Javanica_Scaff2521g023504 on AAM47174 Rh4 (Adhesin) [Plasmodium falciparum]
Length = 1711
Score = 26.2 bits (56), Expect = 0.90, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 6/64 (9%)
Query: 18 ILFTNGCYCGKMSEEEKYCNSDWVAYVKSLRRGEVRDKEGKASEYEYTVKLLKTFKDNKT 77
I F N K+ E K + ++ ++ S + A EYEY +K TFK +T
Sbjct: 356 IYFINKHIVNKIQENFKLNQNKYIHFINS------NNAVNAAKEYEYIIKYYTTFKYLQT 409
Query: 78 CNQN 81
N++
Sbjct: 410 LNKS 413
>M.Javanica_Scaff2521g023504 on XP_821703 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 912
Score = 26.2 bits (56), Expect = 0.95, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 97 GVELKDSQEYLLFGRYGDDGKKKISLCG 124
G +L D++ +L G + GKK+ LCG
Sbjct: 671 GAKLNDNKNTVLLGLSYNSGKKRAVLCG 698
>M.Javanica_Scaff2521g023504 on AAM47175 Rh4 (Adhesin) [Plasmodium falciparum]
Length = 1711
Score = 26.2 bits (56), Expect = 1.1, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 7/64 (10%)
Query: 18 ILFTNGCYCGKMSEEEKYCNSDWVAYVKSLRRGEVRDKEGKASEYEYTVKLLKTFKDNKT 77
I F N K+ E K + ++ ++ S + A EYEY +K TFK +T
Sbjct: 355 IYFINKHIVNKIQENFKLNQNKYIHFINS-------NNAVNAKEYEYIIKYYTTFKYLQT 407
Query: 78 CNQN 81
N++
Sbjct: 408 LNKS 411
>M.Javanica_Scaff2521g023504 on XP_812339 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 949
Score = 25.4 bits (54), Expect = 1.8, Method: Composition-based stats.
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 95 ACGVELKDSQEYLLFGRYGDDGKKKIS 121
AC +E KDS+E F GD G K +S
Sbjct: 674 ACALENKDSKEISHFYIGGDGGAKGVS 700
>M.Javanica_Scaff2521g023504 on XP_814896 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 386
Score = 25.0 bits (53), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 97 GVELKDSQEYLLFGRYGDDGKKKISLCGFNREWEKVTEKLKK 138
G ++ D + LL Y + GKK + LCG + E+++ L
Sbjct: 161 GAKMNDGKTVLLGLSYNNKGKKWMLLCGGGTKSEELSSPLNP 202
>M.Javanica_Scaff2521g023504 on XP_001609602 SBP2 (Others) [Babesia bovis]
Length = 2248
Score = 25.0 bits (53), Expect = 2.4, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 22/40 (55%)
Query: 101 KDSQEYLLFGRYGDDGKKKISLCGFNREWEKVTEKLKKFL 140
+++ EY F DD +K+ + +NR + + ++L +L
Sbjct: 118 QEASEYATFSMLPDDLARKVKIRHYNRLYPGLLQQLPDYL 157
>M.Javanica_Scaff2521g023504 on XP_809850 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 915
Score = 24.6 bits (52), Expect = 2.8, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 8/47 (17%)
Query: 97 GVELKDSQEYLLFG-RYGDDGKKKISLCG-------FNREWEKVTEK 135
GV +K + + G Y ++GKK I LCG + WE T++
Sbjct: 611 GVNMKGAGNSVFLGLSYNNNGKKWILLCGDGTNSGEHSSNWESGTKR 657
>M.Javanica_Scaff2521g023504 on XP_822006 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 845
Score = 24.3 bits (51), Expect = 4.0, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 6/44 (13%)
Query: 97 GVELKDSQEYLLFGRYGDDGKKKISLC--GFNRE----WEKVTE 134
G ++ +L G D GKK+ LC G N+E WE T+
Sbjct: 605 GAKMAGDDNTVLLGMSYDSGKKRAVLCSGGKNKEQSRTWEPQTQ 648
>M.Javanica_Scaff2521g023504 on XP_818708 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 929
Score = 24.3 bits (51), Expect = 4.1, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 14/28 (50%)
Query: 97 GVELKDSQEYLLFGRYGDDGKKKISLCG 124
G + E LFG D GKK+ LCG
Sbjct: 610 GARWEGQGENKLFGLSYDSGKKRAVLCG 637
>M.Javanica_Scaff2521g023504 on XP_816886 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 905
Score = 24.3 bits (51), Expect = 4.4, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 90 ATNSAACGVELKDSQEYLLF---GRYGDDGKKKISLCGFNREWEKVTEKLKKFLKDGD 144
A ++AA + ++ E L+ + GDDG + ++ E++ +KK+ KD D
Sbjct: 368 ADDAAASSLLMRSGNEKLISVYENKKGDDGSYTLVAVSLGKQLERIKSTVKKW-KDLD 424
>M.Javanica_Scaff2521g023504 on XP_818346 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 927
Score = 23.9 bits (50), Expect = 4.7, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 97 GVELKDSQEYLLFGRYGDDGKKKISLCG 124
GV++ DS + +L G +D KK LCG
Sbjct: 595 GVKMNDSGKTVLLGLSYNDEKKWKLLCG 622
>M.Javanica_Scaff2521g023504 on XP_804105 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1017
Score = 23.9 bits (50), Expect = 4.7, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 90 ATNSAACGVELKDSQEYLLF---GRYGDDGKKKISLCGFNREWEKVTEKLKKFLKDGD 144
A ++AA + ++ E L+ + GDDG + ++ E++ +KK+ KD D
Sbjct: 408 ADDAAASSLLMRSGNEKLISVYENKKGDDGSYSLVAVSLGKQLERIKSMVKKW-KDLD 464
>M.Javanica_Scaff2521g023504 on XP_804836 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 919
Score = 23.9 bits (50), Expect = 5.5, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 92 NSAACGVELKDSQEYLLF---GRYGDDGKKKISLCGFNREWEKVTEKLKKFLKDGD 144
++AA + +K E L+ + GDDG + ++ E++ +KK+ KD D
Sbjct: 372 DAAASSLLMKSGNEKLISVYENKKGDDGSYSLVAVSLGKQLERIKSMVKKW-KDLD 426
>M.Javanica_Scaff2521g023504 on XP_808217 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 880
Score = 23.9 bits (50), Expect = 6.0, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Query: 97 GVELKDSQEYLLFGRYGDDGKKKISLC--GFNRE 128
GV++ DS + +L G ++ KK + LC G N+E
Sbjct: 603 GVKMNDSDKTVLLGLSYNNKKKWLLLCDGGENKE 636
>M.Javanica_Scaff2521g023504 on XP_817875 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 935
Score = 23.5 bits (49), Expect = 6.3, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Query: 97 GVELKDSQEYLLFGRYGDDGKKKISLC--GFNRE 128
GV++ DS + +L G ++ KK + LC G N+E
Sbjct: 656 GVKMNDSDKTVLLGLSYNNKKKWLLLCDGGENKE 689
>M.Javanica_Scaff2521g023504 on XP_001610720 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1102
Score = 23.5 bits (49), Expect = 6.4, Method: Composition-based stats.
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 79 NQNNKIDCVYSATNSAACG 97
N+N+ + C+Y+ NSA G
Sbjct: 858 NKNDTLKCLYTCPNSAPTG 876
>M.Javanica_Scaff2521g023504 on XP_814555 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 907
Score = 23.5 bits (49), Expect = 6.6, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 8/47 (17%)
Query: 97 GVELKDSQEYLLFG-RYGDDGKKKISLCG-------FNREWEKVTEK 135
G ++K + + G Y ++GKK I LCG + WE T++
Sbjct: 603 GAKMKGAGNSVFLGLSYNNNGKKWILLCGDGTNSGEHSSNWESGTKR 649
>M.Javanica_Scaff2521g023504 on XP_812311 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 924
Score = 23.5 bits (49), Expect = 7.1, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 5/40 (12%)
Query: 97 GVELKDSQEYLLFGRYGDDGKKKISLCGFNREWEKVTEKL 136
GV++K + +L G + GKK LCG +K T KL
Sbjct: 596 GVKMKGAGNSVLLGLSYNSGKKWHVLCG-----DKTTTKL 630
>M.Javanica_Scaff2521g023504 on XP_819341 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 888
Score = 23.5 bits (49), Expect = 7.2, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 6/44 (13%)
Query: 97 GVELKDSQEYLLFGRYGDDGKKKISLCG------FNREWEKVTE 134
GV++ DS + +L G + +K LCG + WEK T+
Sbjct: 613 GVQMNDSGKTVLLGLSYNKERKWQVLCGDGTSTELSSGWEKETQ 656
>M.Javanica_Scaff2521g023504 on XP_001350409 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2223
Score = 23.5 bits (49), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
Query: 61 EYEYTVKLLKTFKDNKTCNQN--NKIDCVYSATNSAACGVELKDS----QEYLLFG 110
EY Y V ++ + D K + N + ID + + NS +++ D +E LFG
Sbjct: 1981 EYSYNVNMVNSMDDTKYVSNNVYSGIDLINDSLNSGNQPIDIYDEVLKRKENELFG 2036
>M.Javanica_Scaff2521g023504 on XP_817007 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 910
Score = 23.5 bits (49), Expect = 7.9, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 97 GVELKDSQEYLLFGRYGDDGKKKISLCG 124
G + + +L G D GKK+ LCG
Sbjct: 593 GATMNGDDKTVLLGLSYDSGKKRAVLCG 620
>M.Javanica_Scaff2521g023504 on XP_806901 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 369
Score = 23.1 bits (48), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 8/62 (12%)
Query: 84 IDCVYSATNSAACGVELKDSQEYLLFG-RYGDDGKKKISLCG-------FNREWEKVTEK 135
ID V N G LKD++ +L G Y + KK LCG + WE T+
Sbjct: 31 IDGVPKEGNIPVMGAILKDAENPVLLGLSYNNKEKKWTLLCGDGKVIKEHSSTWETRTDS 90
Query: 136 LK 137
+
Sbjct: 91 TQ 92
>M.Javanica_Scaff2521g023504 on XP_001608664 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1116
Score = 23.5 bits (49), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 79 NQNNKIDCVYSATNSAACG 97
N+N+ + C+Y+ NSA G
Sbjct: 872 NKNDTLKCLYTCPNSAPTG 890
>M.Javanica_Scaff2521g023504 on XP_805336 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 931
Score = 23.1 bits (48), Expect = 8.7, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Query: 97 GVELKDSQEYLLFGRYGDDGKKKISLCGFNREWEKVTEKLKKFLKDG 143
GV++ +L G D GKK LCG EK T +L + G
Sbjct: 604 GVKMNGDGNNVLLGLLYDSGKKWQVLCG-----EKTTTELSSGWETG 645
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6077g042341
(124 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001610496 variant erythrocyte surface antigen-1, beta subuni... 31 0.013
XP_805883 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.5
XP_829765 VSG (Establishment) [Trypanosoma brucei] 23 5.1
>M.Javanica_Scaff6077g042341 on XP_001610496 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1159
Score = 31.2 bits (69), Expect = 0.013, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 22/44 (50%)
Query: 81 SLEPPIPSRSFPLLPHGNPVVGSSVLVPASLLQENLSLLAEGFC 124
+L PP S P +PVVG++ PA LSLL E +C
Sbjct: 775 NLSPPAQGTSHPSHIWTHPVVGTNNKYPAHCTGRTLSLLLEYYC 818
>M.Javanica_Scaff6077g042341 on XP_805883 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1038
Score = 24.3 bits (51), Expect = 2.5, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 92 PLLPHGNPVVGSSVLVPASLLQ 113
P PH V GSSV PA+ ++
Sbjct: 759 PAAPHSTVVAGSSVPEPATAME 780
>M.Javanica_Scaff6077g042341 on XP_829765 VSG (Establishment) [Trypanosoma brucei]
Length = 474
Score = 23.5 bits (49), Expect = 5.1, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 43 SMMNRCESLRSYHYSFHSCYEYIHI 67
+ M E++R Y YEY+HI
Sbjct: 109 TAMTAIEAIRHSSYLLGGLYEYLHI 133
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6319g043402
(66 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAP74702 TbVSP1 (Others) [Trypanosoma brucei] 22 3.9
>M.Javanica_Scaff6319g043402 on AAP74702 TbVSP1 (Others) [Trypanosoma brucei]
Length = 413
Score = 21.9 bits (45), Expect = 3.9, Method: Composition-based stats.
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 17 LFYEAFLTGNNDDLAEVEV 35
+ +EA +TG+ND + VE+
Sbjct: 282 VLFEAGVTGDNDPVDAVEI 300
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4935g037034
(200 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff604g008065
(377 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349036 PfEMP1 (Establishment) [Plasmodium falciparum] 25 8.2
XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum] 25 9.0
>M.Javanica_Scaff604g008065 on XP_001349036 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2192
Score = 25.0 bits (53), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 297 STNDWASTIDNALNNCIKNKPNSQ-NLGIDSLLN 329
+ N+W + D+ ++N ++N+PN++ N+ D+L N
Sbjct: 1911 TDNEWNTLKDDFISNMLQNEPNTEPNILHDNLDN 1944
>M.Javanica_Scaff604g008065 on XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3119
Score = 25.0 bits (53), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 71/157 (45%), Gaps = 24/157 (15%)
Query: 73 DANSQERCVLSVSDLEQKAWDRN--GPLRDCSICRTFATGAIKAILSTPADEQKCIREQI 130
D ++ C L+ D Q W + G DC+ C +F + L ++++ R+Q
Sbjct: 330 DEKKRKYCSLNGFDCTQTIWKKKVFGRGNDCTNC-SFKCFPYEIWL---GNQREAFRKQK 385
Query: 131 SKAIAVESESCLRKKVQDFGGIPEIP----DLEEGGSGLREEVIDSISDYIWIHSRLAFC 186
K A E E+ + + GIP+ ++ + L+E+ +++ ++I + + +C
Sbjct: 386 EK-YAKEIEAYVTNR-----GIPKSSINNGYYKDFYNKLKEKTYNTVDEFINLLNEGRYC 439
Query: 187 AERKPERAA----KTRECLKSPFLGFYSKHCRVLNSC 219
++KPE KT E K F + S +C+V C
Sbjct: 440 KKQKPEEENIDFIKTGE--KGTF--YRSDYCQVCPDC 472
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff348g005179
(100 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_965997 PfEMP1 (Establishment) [Plasmodium falciparum] 27 0.16
AAF14193 SBP3 (Others) [Babesia bovis] 23 4.8
>M.Javanica_Scaff348g005179 on XP_965997 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2879
Score = 27.3 bits (59), Expect = 0.16, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Query: 33 EHAQNYYKRLAGEDGERFKLELTGDYLDNPIIGLTDIND---TFHFEDLNGG 81
E Q YK +D + +K EL G+ + I+G T D TF + L G
Sbjct: 19 EFGQQVYKEKVEKDAKIYKGELEGNLASSSILGETASTDKPCTFEYNKLLGA 70
>M.Javanica_Scaff348g005179 on AAF14193 SBP3 (Others) [Babesia bovis]
Length = 1089
Score = 23.1 bits (48), Expect = 4.8, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 8/47 (17%)
Query: 45 EDGERFKLELTGDY--------LDNPIIGLTDINDTFHFEDLNGGPF 83
E+ + ++ EL +Y L+NP+I DI H E N F
Sbjct: 21 ENVDNYQHELDDNYMPVFTEKQLENPVIVPLDITSGIHEETYNAKSF 67
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2864g025705
(77 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001219221 VSG (Establishment) [Trypanosoma brucei] 24 1.4
XP_827768 VSG (Establishment) [Trypanosoma brucei] 23 2.6
XP_803417 VSG (Establishment) [Trypanosoma brucei] 22 4.1
XP_817877 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.8
XP_814038 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.8
XP_845143 VSG (Establishment) [Trypanosoma brucei] 22 5.9
PF14_0553 Falcipain1 (Cysteine protease) [Plasmodium falciparum] 22 7.5
>M.Javanica_Scaff2864g025705 on XP_001219221 VSG (Establishment) [Trypanosoma brucei]
Length = 537
Score = 23.9 bits (50), Expect = 1.4, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 1 MKLSIFLFLCLFLTPHHVDSN 21
M L +FLFL LFL+ S+
Sbjct: 1 MLLPVFLFLALFLSAKQATSD 21
>M.Javanica_Scaff2864g025705 on XP_827768 VSG (Establishment) [Trypanosoma brucei]
Length = 489
Score = 23.1 bits (48), Expect = 2.6, Method: Composition-based stats.
Identities = 9/14 (64%), Positives = 11/14 (78%)
Query: 46 TGTSGHGATGTGSI 59
+G+S HG GTGSI
Sbjct: 141 SGSSNHGNAGTGSI 154
>M.Javanica_Scaff2864g025705 on XP_803417 VSG (Establishment) [Trypanosoma brucei]
Length = 540
Score = 22.3 bits (46), Expect = 4.1, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 14 TPHHVDSNNSDDETDEEHHFNPYQPRYGETSG 45
T H+ + SDD DE+ + YG+ G
Sbjct: 316 TKIHLQNKKSDDPDDEDSRERAIKTAYGDDDG 347
>M.Javanica_Scaff2864g025705 on XP_817877 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 900
Score = 22.3 bits (46), Expect = 4.8, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 37 QPRYGETSGTGTSGHGATGTGSIPSSTGKYSEGIYSGT 74
QP + +G + A T SIPS+ + + SGT
Sbjct: 778 QPMRSSGADSGGASASAVSTVSIPSAENDSVKKVASGT 815
>M.Javanica_Scaff2864g025705 on XP_814038 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 790
Score = 21.9 bits (45), Expect = 5.8, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 47 GTSGHGATGTGSIPSSTGKYSEGIYSGTEHS 77
++G A G G +P++ G+ + + EH+
Sbjct: 733 ASAGSAAPGPGEVPAAPGRTTVERATNAEHA 763
>M.Javanica_Scaff2864g025705 on XP_845143 VSG (Establishment) [Trypanosoma brucei]
Length = 501
Score = 21.9 bits (45), Expect = 5.9, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 37 QPRYGETSGTGTSGHGATGTGSIPSSTGKYSE 68
Q Y T + ATG+ PS+TGK ++
Sbjct: 247 QADYVCTPAVAKADRWATGSPDTPSNTGKITK 278
>M.Javanica_Scaff2864g025705 on PF14_0553 Falcipain1 (Cysteine protease) [Plasmodium falciparum]
Length = 569
Score = 21.6 bits (44), Expect = 7.5, Method: Composition-based stats.
Identities = 7/9 (77%), Positives = 9/9 (100%)
Query: 66 YSEGIYSGT 74
YSEG+Y+GT
Sbjct: 473 YSEGVYNGT 481
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2987g026473
(59 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349517 PfEMP1 (Establishment) [Plasmodium falciparum] 23 1.1
>M.Javanica_Scaff2987g026473 on XP_001349517 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 440
Score = 23.5 bits (49), Expect = 1.1, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 20 LYVYTQIYYLLIPI-PHCYSCVSRCCDFYANVYVCI 54
++VYT I +L IPI P+ + Y N Y+ I
Sbjct: 10 IHVYTYILHLYIPIYPYMHKPTCIPTYIYTNTYILI 45
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6568g044522
(82 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5917g041634
(553 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5304g038838
(464 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609619 variant erythrocyte surface antigen-1, beta subuni... 26 5.2
XP_001611147 variant erythrocyte surface antigen-1, alpha subun... 26 5.8
>M.Javanica_Scaff5304g038838 on XP_001609619 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1086
Score = 26.2 bits (56), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 320 CGMKCNGQRLELSPADTK--VLWLLLQDSPDLLNKLSR 355
CG K + +R P T LW L D PD ++ L+R
Sbjct: 191 CGYKSSYKRPTTPPGSTTDLFLWTTLSDKPDQVHLLAR 228
>M.Javanica_Scaff5304g038838 on XP_001611147 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1304
Score = 26.2 bits (56), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 107 TLDKIYGHGDKIGKELDDSLGVEISGRVPSGKYD 140
L+K+ G+G K G L D +G G+V SG+YD
Sbjct: 730 ALEKLTGNGGK-GDLLGDVVGHSGLGKVDSGEYD 762
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff26922g093039
(402 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6885g045867
(971 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ABA06449 MSA-2a/b T-2 (Invasion) [Babesia bovis] 32 0.14
ABA06445 MSA-2a/b (Invasion) [Babesia bovis] 31 0.27
XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum] 28 4.7
XP_807140 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 5.0
XP_804836 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 7.4
XP_820141 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 7.4
XP_810140 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 10.0
>M.Javanica_Scaff6885g045867 on ABA06449 MSA-2a/b T-2 (Invasion) [Babesia bovis]
Length = 274
Score = 32.0 bits (71), Expect = 0.14, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 424 PTTTTPLPTTTTTEPSTTTTQPTTTTTEPSTTTTAEPTTTTTEPSTTTS 472
PT ++P TTTT+PS + P T+ S +P+ + P T S
Sbjct: 207 PTHSSP-QGTTTTQPSQDSAAPNTSAESSSGNLNGQPSKSAETPKPTGS 254
>M.Javanica_Scaff6885g045867 on ABA06445 MSA-2a/b (Invasion) [Babesia bovis]
Length = 274
Score = 30.8 bits (68), Expect = 0.27, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 424 PTTTTPLPTTTTTEPSTTTTQPTTTTTEPSTTTTAEPTTTTTEPSTTTS 472
PT ++P TTTT+PS + P T+ S +P+ P T S
Sbjct: 207 PTHSSP-QGTTTTQPSQDSAAPNTSAESSSGNLNGQPSKPAETPKPTGS 254
>M.Javanica_Scaff6885g045867 on XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3119
Score = 27.7 bits (60), Expect = 4.7, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 417 PTTTTTLPTTTTPLPTTTTTEPSTTTTQPTTT 448
PT+ +PTT+ TTT S TTT P+ +
Sbjct: 1896 PTSWKCVPTTSGGSGVTTTAGSSVTTTPPSNS 1927
Score = 27.7 bits (60), Expect = 4.7, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 41/100 (41%), Gaps = 12/100 (12%)
Query: 819 INNLAATECIYNCKDKDVSQACYNPSPISVVRIRCTDSTKFCVCTSDNKGCFTVTQSAPL 878
+++L T I CKD + ++AC R R T+ K TV Q A
Sbjct: 700 LDHLKETATI--CKDNNTNEAC------ETSRNRKTNP----CAKPHGKKLATVKQIAQY 747
Query: 879 YQADYLIYANASYTFLALNTGASQIKNSGTGKTYDFQTSM 918
Y+ I N + AL ASQ + GK DF+T +
Sbjct: 748 YKRKAYIQLNERGSRSALKGDASQGQYDRGGKADDFKTKL 787
Score = 27.3 bits (59), Expect = 4.9, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 424 PTTTTPLPTTTTTEPSTTTTQPTTTTTEPSTT 455
PT+ +PTT+ TTT + TTT PS +
Sbjct: 1896 PTSWKCVPTTSGGSGVTTTAGSSVTTTPPSNS 1927
Score = 26.9 bits (58), Expect = 7.9, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 766 PTTTTTLPTTTTTLPTTTTTLPT-TTTPPLNC-ADCSAGQSKVIYEKN 811
PT+ +PTT+ TTT + TTTPP N A C + + +Y K+
Sbjct: 1896 PTSWKCVPTTSGGSGVTTTAGSSVTTTPPSNSGAICVPPRRRRLYVKD 1943
>M.Javanica_Scaff6885g045867 on XP_807140 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 393
Score = 27.3 bits (59), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 3/84 (3%)
Query: 627 AASIRCLQAGQTCTPIKCSGTRKPSPCPTTTTTMPTTTTTLPTTT-TTLPTTTTTLPTTT 685
+S R + AG + P K +P+ T T T + + +P T T P T
Sbjct: 270 GSSERTMNAGSSLNPSKSDA--EPTSAEDTDNISRTEGTEVSSEDGKEVPQTVDTAPGNT 327
Query: 686 TTLPTTTTTLPTTTTTLPSTTTVL 709
T P T + T PS T +L
Sbjct: 328 NTAPGETEISSESNATTPSDTGIL 351
>M.Javanica_Scaff6885g045867 on XP_804836 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 919
Score = 26.9 bits (58), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 21/56 (37%)
Query: 654 PTTTTTMPTTTTTLPTTTTTLPTTTTTLPTTTTTLPTTTTTLPTTTTTLPSTTTVL 709
P T T TT P T P +TLP T + T+PS T +L
Sbjct: 822 PEGATERQTQETTAPLVENGDSEDVGTAPGNASTLPGETKIPSESNATIPSDTDIL 877
>M.Javanica_Scaff6885g045867 on XP_820141 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 925
Score = 26.9 bits (58), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 423 LPTTTTPLPTTTTTEP-STTTTQPTTTTTEPSTTTTAEPTTTTTEPSTTTSFNCAQPPVT 481
+PT +TP + + ++ + T T + + + EPT T + ST +Q PV
Sbjct: 768 VPTVSTPSAGKDSLQQVASGKSSDGTRTVDGGSFSDGEPTVETGDRSTVQGDGSSQTPVG 827
Query: 482 SLLSYNTSDPNIQ 494
+ + + DPN +
Sbjct: 828 TPATADAYDPNAE 840
>M.Javanica_Scaff6885g045867 on XP_810140 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 923
Score = 26.6 bits (57), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 46/112 (41%), Gaps = 8/112 (7%)
Query: 400 TQPSTTTTAEPTTTTTLPTTTTTLPTTTTPLPTTTTTEPSTTTTQPTTTTTEPSTTTTAE 459
T PS E TT T PT PT P PTT T ++ +T P+ + + E
Sbjct: 703 TSPSVGPANERMTTNTQPTAPA--PTPAGPQPTTRVTSNGSSGASGGAPST-PAVSESEE 759
Query: 460 PT---TTTTEPSTTTSFNCAQPPVTSLLSY-NTSDPNIQTGPNATEGVCECP 507
P + + EP S + PV S ++PN T +A EG + P
Sbjct: 760 PKPAESESEEPKPAESESEEPKPVESESEEPKPAEPNAATS-SAREGTADQP 810
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff8006g050313
(100 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_820147 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.80
XP_816389 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.87
XP_818394 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.1
XP_813642 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.5
XP_811678 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.5
XP_813641 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.9
XP_805336 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.0
XP_814441 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.2
XP_817721 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.3
XP_813123 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 8.0
XP_810563 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 9.8
XP_810562 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 9.8
XP_811897 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 9.8
XP_814443 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 9.8
>M.Javanica_Scaff8006g050313 on XP_820147 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 878
Score = 25.0 bits (53), Expect = 0.80, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 22 VNKSSDKKAESKGTPSLRVKGGSIF 46
+N+S D ES G PSL G +F
Sbjct: 78 INESDDVTVESLGAPSLLKVGNDVF 102
>M.Javanica_Scaff8006g050313 on XP_816389 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 920
Score = 25.0 bits (53), Expect = 0.87, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 22 VNKSSDKKAESKGTPSLRVKGGSIF 46
+N+S D+ +S G PSL G +F
Sbjct: 79 INESGDETVDSLGAPSLLKVGSDVF 103
>M.Javanica_Scaff8006g050313 on XP_818394 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1059
Score = 24.6 bits (52), Expect = 1.1, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Query: 22 VNKSSDKKAESKGTPSLRVKGGSIFKGILLKLYKHSTPIGACWLGPFHL 70
V++ SD A S SL +KGG K L+ LY++ GA L HL
Sbjct: 407 VSRESDDAAAS----SLLMKGGKDNKEELISLYENKKGDGAYSLVAVHL 451
>M.Javanica_Scaff8006g050313 on XP_813642 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 872
Score = 23.9 bits (50), Expect = 2.5, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 22 VNKSSDKKAESKGTPSLRVKGGSIF 46
+N+S D +S G PSL G +F
Sbjct: 79 INESDDVTVDSLGAPSLLKVGNDVF 103
>M.Javanica_Scaff8006g050313 on XP_811678 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 926
Score = 23.9 bits (50), Expect = 2.5, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 22 VNKSSDKKAESKGTPSLRVKGGSIF 46
+N+S D +S G PSL G +F
Sbjct: 78 INESDDVTVDSLGAPSLLKVGNDVF 102
>M.Javanica_Scaff8006g050313 on XP_813641 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 873
Score = 23.5 bits (49), Expect = 2.9, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 22 VNKSSDKKAESKGTPSLRVKGGSIF 46
+N+S + ES G PSL G +F
Sbjct: 78 INESEGETVESLGAPSLLKVGSDVF 102
>M.Javanica_Scaff8006g050313 on XP_805336 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 931
Score = 23.5 bits (49), Expect = 3.0, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 22 VNKSSDKKAESKGTPSLRVKGGSIF 46
+N+S + ES G PSL G +F
Sbjct: 78 INESGGETVESLGAPSLLKVGSDVF 102
>M.Javanica_Scaff8006g050313 on XP_814441 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 931
Score = 23.5 bits (49), Expect = 3.2, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 22 VNKSSDKKAESKGTPSLRVKGGSIF 46
+N+S + ES G PSL G +F
Sbjct: 80 INESGGETVESLGAPSLLKVGNDVF 104
>M.Javanica_Scaff8006g050313 on XP_817721 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 922
Score = 23.1 bits (48), Expect = 4.3, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 22 VNKSSDKKAESKGTPSLRVKGGSIF 46
+N+S + ES G PSL G +F
Sbjct: 80 INESGGETVESLGAPSLLKVGDDVF 104
>M.Javanica_Scaff8006g050313 on XP_813123 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1048
Score = 22.3 bits (46), Expect = 8.0, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 22 VNKSSDKKAESKGTPSLRVKGGSIFKGILLKLYKHSTPIGACWLGPFHL 70
V++ SD A S SL +K G K L+ LY++ GA L HL
Sbjct: 407 VSRESDDAAAS----SLLMKSGKDNKEELISLYENKKGDGAYSLVAVHL 451
>M.Javanica_Scaff8006g050313 on XP_810563 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 868
Score = 21.9 bits (45), Expect = 9.8, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 22 VNKSSDKKAESKGTPSLRVKGGSIF 46
+N+S + +S G PSL G +F
Sbjct: 78 INESGGETVDSLGAPSLLKVGNDVF 102
>M.Javanica_Scaff8006g050313 on XP_810562 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 874
Score = 21.9 bits (45), Expect = 9.8, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 22 VNKSSDKKAESKGTPSLRVKGGSIF 46
+N+S + +S G PSL G +F
Sbjct: 78 INESGGETVDSLGAPSLLKVGNDVF 102
>M.Javanica_Scaff8006g050313 on XP_811897 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 879
Score = 21.9 bits (45), Expect = 9.8, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 22 VNKSSDKKAESKGTPSLRVKGGSIF 46
+N+S + +S G PSL G +F
Sbjct: 79 INESGGETVDSLGAPSLLKVGNDVF 103
>M.Javanica_Scaff8006g050313 on XP_814443 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 924
Score = 21.9 bits (45), Expect = 9.8, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 22 VNKSSDKKAESKGTPSLRVKGGSIF 46
+N+S + +S G PSL G +F
Sbjct: 78 INESGGETVDSLGAPSLLKVGNDVF 102
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2844g025574
(78 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349434 PfEMP1 (Establishment) [Plasmodium falciparum] 24 0.90
XP_001609540 variant erythrocyte surface antigen-1, alpha subun... 24 1.4
XP_001609101 variant erythrocyte surface antigen-1, alpha subun... 23 1.7
XP_001609163 variant erythrocyte surface antigen-1, alpha subun... 23 1.7
XP_001351439 PfEMP1 (Establishment) [Plasmodium falciparum] 23 1.8
XP_001351079 PfEMP1 (Establishment) [Plasmodium falciparum] 22 6.3
XP_656181 Hgl2 (Adhesin) [Entamoeba histolytica] 22 9.2
>M.Javanica_Scaff2844g025574 on XP_001349434 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2109
Score = 24.3 bits (51), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 13/57 (22%), Positives = 28/57 (49%), Gaps = 8/57 (14%)
Query: 20 KNIFSDITTSLNTKLDPCKDFYKFVCDGFEKRIKVSECYEISNAATRKAEVDDQLEC 76
+++ S I ++N ++PCKD +F + + C +++ K + D +EC
Sbjct: 1491 EDLQSQIPVTINKAIEPCKDLGEFE--------RSTHCNGAASSENGKPQKKDIIEC 1539
>M.Javanica_Scaff2844g025574 on XP_001609540 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1349
Score = 23.9 bits (50), Expect = 1.4, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 32 TKLDPCKDFYKFVCDGFEKRI 52
T +DPCK+ DG +K +
Sbjct: 790 TDVDPCKNLVSAAIDGLQKAL 810
>M.Javanica_Scaff2844g025574 on XP_001609101 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1359
Score = 23.5 bits (49), Expect = 1.7, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 31 NTKLDPCKDFYKFVCDGFEKRIK-VSECYEISNAATRKAEVDDQ 73
++ +DPCK+ DG K ++ + + + ATRK + Q
Sbjct: 789 SSDIDPCKNIVSATIDGLHKALQLLKDAVQQIMEATRKDTTEFQ 832
>M.Javanica_Scaff2844g025574 on XP_001609163 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1360
Score = 23.5 bits (49), Expect = 1.7, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 31 NTKLDPCKDFYKFVCDGFEKRIK-VSECYEISNAATRKAEVDDQ 73
++ +DPCK+ DG K ++ + + + ATRK + Q
Sbjct: 789 SSDIDPCKNIVSATIDGLHKALQLLKDAVQQIMEATRKDTTEFQ 832
>M.Javanica_Scaff2844g025574 on XP_001351439 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2326
Score = 23.5 bits (49), Expect = 1.8, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 17/38 (44%)
Query: 14 QLIFASKNIFSDITTSLNTKLDPCKDFYKFVCDGFEKR 51
QL K IF DI L + KD Y+ D F+ R
Sbjct: 218 QLESKLKEIFGDIYNELTNGRNGVKDHYQDTTDYFQLR 255
>M.Javanica_Scaff2844g025574 on XP_001351079 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2203
Score = 21.9 bits (45), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 10/32 (31%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Query: 14 QLIFASKNIFSDIT--TSLNTKLDPCKDFYKF 43
++I +N D+ T ++ + PCKD KF
Sbjct: 1553 EMISLVRNFLGDVQPQTEVHKAIQPCKDLDKF 1584
>M.Javanica_Scaff2844g025574 on XP_656181 Hgl2 (Adhesin) [Entamoeba histolytica]
Length = 1286
Score = 21.6 bits (44), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 13/28 (46%)
Query: 26 ITTSLNTKLDPCKDFYKFVCDGFEKRIK 53
IT K CKD K CD KRI+
Sbjct: 972 ITEKDGIKTTTCKDTGKTTCDTNNKRIE 999
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3940g032026
(253 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_808064 Trans-sialidase (Invasion) [Trypanosoma cruzi] 35 0.005
XP_813586 Trans-sialidase (Invasion) [Trypanosoma cruzi] 31 0.083
XP_813587 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.19
XP_803341 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.32
XP_809824 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.37
XP_805038 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.66
XP_820135 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.67
XP_802978 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.00
XP_820186 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.1
XP_814486 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.1
AAX07975 Alpha-1 giardin (Adhesin) [Giardia duodenalis] 26 2.1
XP_806519 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.6
XP_001351561 PfEMP1 (Establishment) [Plasmodium falciparum] 26 3.0
XP_001348946 PfEMP1 (Establishment) [Plasmodium falciparum] 26 3.0
XP_810140 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 3.2
XP_001609618 variant erythrocyte surface antigen-1, alpha subun... 26 3.4
XP_812069 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.6
XP_816643 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.9
XP_807541 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.9
XP_808957 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.2
XP_808394 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.5
XP_810391 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 7.1
XP_815706 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 7.1
XP_815707 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 7.1
XP_804330 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 7.1
>M.Javanica_Scaff3940g032026 on XP_808064 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 718
Score = 34.7 bits (78), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/173 (20%), Positives = 66/173 (38%), Gaps = 21/173 (12%)
Query: 50 NANSILKVKTKKDKFKISRNKFDEFNELNEEAKKINKSKEFSTFALTLFGILNSEKTEML 109
N++++ KK ++ D E + + + FS + TL ++ +
Sbjct: 504 GVNAVVRGAAKKAPSGLTFEGHDAGAEWPVDKQWPTRPLHFSNYGFTLAATVSIHEVPKG 563
Query: 110 STNLENIREFNKEILALIS---NVE----------HFQI--LEDT------LFDEIDKIY 148
T L +++ K L +S N+E HF L+ T + D + +Y
Sbjct: 564 ITPLMGLKKMGKTTLLGLSYDNNMEWSVEHELFPKHFTAWELDKTYHVVLKMHDGVGSVY 623
Query: 149 KKNLSKFRLTKFEKFNEYLVSLEHFKFKTILEKLEMCSSKSKVSEIFGNNQKL 201
+ + FNE L ++ HF F E+L + V+ +F N+ L
Sbjct: 624 VDGTPLWNMRLRNSFNEGLDAVSHFYFGAYDEQLSSGKIHATVANVFLYNRPL 676
>M.Javanica_Scaff3940g032026 on XP_813586 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1748
Score = 30.8 bits (68), Expect = 0.083, Method: Composition-based stats.
Identities = 37/171 (21%), Positives = 68/171 (39%), Gaps = 21/171 (12%)
Query: 52 NSILKVKTKKDKFKISRNKFDEFNELNEEAKKINKSKEFSTFALTLFGILNSEKTEMLST 111
N++++ TKK ++ D E + + N+ FS + TL ++ + T
Sbjct: 506 NAVVRGATKKAPSGLTFEGHDAGAEWPVDKQWPNRPLHFSNYGFTLAATVSIHEVPKGIT 565
Query: 112 NLENIREFNKEILALIS---NVE----------HFQILE-DTLF-------DEIDKIYKK 150
L +++ K L +S N+E HF E D + D + +Y
Sbjct: 566 PLMGLKKMGKTTLLGLSYDNNMEWSVEHELFPKHFTAWELDKTYHVVLKMHDGVGSVYVD 625
Query: 151 NLSKFRLTKFEKFNEYLVSLEHFKFKTILEKLEMCSSKSKVSEIFGNNQKL 201
+ ++ FNE L ++ HF F E+L + V+ +F N+ L
Sbjct: 626 GTPLWNMSLRNSFNEGLDAVSHFYFGAYDEQLSSGKIHATVANVFLYNRPL 676
>M.Javanica_Scaff3940g032026 on XP_813587 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 751
Score = 29.6 bits (65), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/172 (17%), Positives = 65/172 (37%), Gaps = 23/172 (13%)
Query: 52 NSILKVKTKKDKFKISRNKFDEFNELNEEAKKINKSKEFSTFALTLFGILNSEKTEMLST 111
N++++ KK ++ D E + + + F+ + TL ++ + T
Sbjct: 340 NAVVRGAAKKAPDGLTFEGHDAGAEWPVDKQWPTRPFHFANYGFTLAATVSIHEVPKGIT 399
Query: 112 NLENIREFNKEILALIS---NVEHFQILEDT-------------------LFDEIDKIYK 149
L +++ K L +S N+E + ++ + + D + +Y
Sbjct: 400 PLMGLKKMGKTTLLGLSYDNNME-WSVVHGSYQSYFAKWELDKTYHVVLKMHDGVGSVYV 458
Query: 150 KNLSKFRLTKFEKFNEYLVSLEHFKFKTILEKLEMCSSKSKVSEIFGNNQKL 201
+ + FNE L ++ HF F E+L + V+ +F N+ L
Sbjct: 459 DGTPLWNMRLRNSFNEGLDAVSHFYFGAYDEQLSSGKIHATVANVFLYNRPL 510
>M.Javanica_Scaff3940g032026 on XP_803341 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 302
Score = 28.5 bits (62), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 13/56 (23%), Positives = 25/56 (44%)
Query: 140 LFDEIDKIYKKNLSKFRLTKFEKFNEYLVSLEHFKFKTILEKLEMCSSKSKVSEIF 195
+ D + +Y + ++ FNE L ++ HF F E+L + V+ +F
Sbjct: 11 MRDGVGSVYVDGTPLWNMSLRNSFNEGLDAVSHFYFGAYDEQLSSGKIHATVANVF 66
>M.Javanica_Scaff3940g032026 on XP_809824 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 364
Score = 28.5 bits (62), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 28/62 (45%)
Query: 140 LFDEIDKIYKKNLSKFRLTKFEKFNEYLVSLEHFKFKTILEKLEMCSSKSKVSEIFGNNQ 199
+ D + +Y + ++ FNE L ++ HF F E+L + V+ +F N+
Sbjct: 52 MRDGVGSVYVDGTPLWNMSLRNSFNEGLDAVSHFYFGAYDEQLSSGKIHATVANVFLYNR 111
Query: 200 KL 201
L
Sbjct: 112 PL 113
>M.Javanica_Scaff3940g032026 on XP_805038 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 927
Score = 27.7 bits (60), Expect = 0.66, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 9/112 (8%)
Query: 97 LFGILNSEKTEMLSTNLENIRE-------FNKEILALISNVEHFQILEDTLFDEIDKIYK 149
L G+ KT +L + +N E F K A + + +L+ + D + +Y
Sbjct: 567 LMGLKKMGKTTLLGLSYDNNMEWSVEHELFPKHFTAWELDKTYHVVLK--MHDGVGSVYV 624
Query: 150 KNLSKFRLTKFEKFNEYLVSLEHFKFKTILEKLEMCSSKSKVSEIFGNNQKL 201
+ ++ FNE L ++ HF F E+L + V+ +F N+ L
Sbjct: 625 DGTPLWNMSLRNSFNEGLDAVSHFYFGAYDEQLSSGKIHATVANVFLYNRPL 676
>M.Javanica_Scaff3940g032026 on XP_820135 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1519
Score = 27.7 bits (60), Expect = 0.67, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 9/112 (8%)
Query: 97 LFGILNSEKTEMLSTNLENIRE-------FNKEILALISNVEHFQILEDTLFDEIDKIYK 149
L G+ KT +L + +N E F K A + + +L+ + D + +Y
Sbjct: 566 LMGLKKMGKTTLLGLSYDNNMEWSVEHELFPKHFTAWELDKTYHVVLK--MHDGVGSVYV 623
Query: 150 KNLSKFRLTKFEKFNEYLVSLEHFKFKTILEKLEMCSSKSKVSEIFGNNQKL 201
+ ++ FNE L ++ HF F E+L + + V+ +F N+ L
Sbjct: 624 DGTLLWNMSLRNSFNEGLDAVSHFYFGAYDEQLSSRKNHATVANVFLYNRPL 675
>M.Javanica_Scaff3940g032026 on XP_802978 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 340
Score = 26.9 bits (58), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 28/62 (45%)
Query: 140 LFDEIDKIYKKNLSKFRLTKFEKFNEYLVSLEHFKFKTILEKLEMCSSKSKVSEIFGNNQ 199
+ D + +Y + ++ FNE L ++ HF F E+L + V+ +F N+
Sbjct: 108 MHDGVGSVYVDGTLLWNMSLRNSFNEGLDTVSHFYFGAYDEQLSSGKIHATVANVFLYNR 167
Query: 200 KL 201
L
Sbjct: 168 PL 169
>M.Javanica_Scaff3940g032026 on XP_820186 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1133
Score = 27.3 bits (59), Expect = 1.1, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 9/112 (8%)
Query: 97 LFGILNSEKTEMLSTNLENIRE-------FNKEILALISNVEHFQILEDTLFDEIDKIYK 149
L G+ KT +L + +N E F K A + + +L+ + D + +Y
Sbjct: 567 LMGLKKMGKTTLLGLSYDNNMEWSVEHELFPKHFTAWELDKTYHVVLK--MHDGVGSVYV 624
Query: 150 KNLSKFRLTKFEKFNEYLVSLEHFKFKTILEKLEMCSSKSKVSEIFGNNQKL 201
+ ++ FNE L ++ HF F E+L + V+ +F N+ L
Sbjct: 625 DGTLLWNMSLRNSFNEGLDAVSHFYFGAYDEQLSSGKIHATVANVFLYNRPL 676
>M.Javanica_Scaff3940g032026 on XP_814486 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 948
Score = 26.9 bits (58), Expect = 1.1, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 9/112 (8%)
Query: 97 LFGILNSEKTEMLSTNLENIRE-------FNKEILALISNVEHFQILEDTLFDEIDKIYK 149
L G+ KT +L + +N E F K A + + +L+ + D + +Y
Sbjct: 567 LMGLKKMGKTTLLGLSYDNNMEWSVEHELFPKHFAAWELDKTYHVVLK--MRDGVGSVYV 624
Query: 150 KNLSKFRLTKFEKFNEYLVSLEHFKFKTILEKLEMCSSKSKVSEIFGNNQKL 201
+ ++ FNE L ++ HF F E+L + V+ +F N+ L
Sbjct: 625 DGTPLWNMSLRNSFNEGLDAVSHFYFGAYDEQLSSGKIHATVANVFLYNRPL 676
>M.Javanica_Scaff3940g032026 on AAX07975 Alpha-1 giardin (Adhesin) [Giardia duodenalis]
Length = 255
Score = 25.8 bits (55), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 222 EYSTEKKEKVIKKSIKSFFEEWKKQIKK 249
EYS E +EK+ K + S+ +E IKK
Sbjct: 29 EYSAESREKIAKAYVASYGKELPDDIKK 56
>M.Javanica_Scaff3940g032026 on XP_806519 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 912
Score = 26.2 bits (56), Expect = 2.6, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 28/62 (45%)
Query: 140 LFDEIDKIYKKNLSKFRLTKFEKFNEYLVSLEHFKFKTILEKLEMCSSKSKVSEIFGNNQ 199
+ D + +Y + ++ FNE L ++ HF F E+L + V+ +F N+
Sbjct: 615 MHDGVGSVYVDGTLLWNMSLRNSFNEGLDTVSHFYFGAYDEQLSSGKIHATVANVFLYNR 674
Query: 200 KL 201
L
Sbjct: 675 PL 676
>M.Javanica_Scaff3940g032026 on XP_001351561 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3553
Score = 25.8 bits (55), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 22/90 (24%)
Query: 156 RLTKFEKFNEYLVSLEHFKFKTILEKLEMCSSKSKVSEIFGNNQKLVKYIE-KQCNELIE 214
RL ++ E+ + ++K + EK C SK K G N+ Y E K+CN+ +
Sbjct: 1518 RLRWMTEWAEWYCKAQSQEYKKLEEKCSQCKSKGK-----GGNE---CYRETKECNDCKQ 1569
Query: 215 YLKGFDIEYSTEKKEKVIKKSIKSFFEEWK 244
+ EY K+ IK++ ++WK
Sbjct: 1570 ACE----EY---------KRKIKTWADQWK 1586
>M.Javanica_Scaff3940g032026 on XP_001348946 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3553
Score = 25.8 bits (55), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 22/90 (24%)
Query: 156 RLTKFEKFNEYLVSLEHFKFKTILEKLEMCSSKSKVSEIFGNNQKLVKYIE-KQCNELIE 214
RL ++ E+ + ++K + EK C SK K G N+ Y E K+CN+ +
Sbjct: 1518 RLRWMTEWAEWYCKAQSQEYKKLEEKCSQCKSKGK-----GGNE---CYRETKECNDCKQ 1569
Query: 215 YLKGFDIEYSTEKKEKVIKKSIKSFFEEWK 244
+ EY K+ IK++ ++WK
Sbjct: 1570 ACE----EY---------KRKIKTWADQWK 1586
>M.Javanica_Scaff3940g032026 on XP_810140 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 923
Score = 25.8 bits (55), Expect = 3.2, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 27/62 (43%)
Query: 140 LFDEIDKIYKKNLSKFRLTKFEKFNEYLVSLEHFKFKTILEKLEMCSSKSKVSEIFGNNQ 199
+ D + +Y + L FNE L ++ HF F E+L + V+ +F N+
Sbjct: 613 MHDGVGSVYVDGTLLWNLRLRNSFNEGLDTVSHFYFGAYDEQLSSGKIHATVANVFLYNR 672
Query: 200 KL 201
L
Sbjct: 673 PL 674
>M.Javanica_Scaff3940g032026 on XP_001609618 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1325
Score = 25.8 bits (55), Expect = 3.4, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 183 EMCSSKSKVSEIFGNNQKLVKYIEKQCNELIEYLKG-FDIEYSTEKKEKVIKKSIKSF 239
E+ K+K+SE +++K +EKQ E++E + D + EK K+IK
Sbjct: 780 EVDPGKNKISEAINKVLEMLKEMEKQLKEVLEKEQSNMDENTNLNGHEKGFHKAIKEL 837
>M.Javanica_Scaff3940g032026 on XP_812069 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 948
Score = 25.4 bits (54), Expect = 3.6, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 27/62 (43%)
Query: 140 LFDEIDKIYKKNLSKFRLTKFEKFNEYLVSLEHFKFKTILEKLEMCSSKSKVSEIFGNNQ 199
+ D + +Y + + FNE L ++ HF F E+L + V+ +F N+
Sbjct: 615 MHDGVGSVYVDGTPLWNMRLRNSFNEGLDAVSHFYFGAYDEQLSSGKIHATVANVFLYNR 674
Query: 200 KL 201
L
Sbjct: 675 PL 676
>M.Javanica_Scaff3940g032026 on XP_816643 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 904
Score = 25.4 bits (54), Expect = 3.9, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 26/62 (41%)
Query: 140 LFDEIDKIYKKNLSKFRLTKFEKFNEYLVSLEHFKFKTILEKLEMCSSKSKVSEIFGNNQ 199
+ D + +Y + L FNE L + HF F E+L + V+ +F N+
Sbjct: 614 MHDGVGSVYVDGTLLWNLRLRNSFNEELDEISHFYFGAYDEQLSSRKIHATVANVFLYNR 673
Query: 200 KL 201
L
Sbjct: 674 PL 675
>M.Javanica_Scaff3940g032026 on XP_807541 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 920
Score = 25.4 bits (54), Expect = 3.9, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 26/62 (41%)
Query: 140 LFDEIDKIYKKNLSKFRLTKFEKFNEYLVSLEHFKFKTILEKLEMCSSKSKVSEIFGNNQ 199
+ D + +Y + L FNE L + HF F E+L + V+ +F N+
Sbjct: 616 MHDGVGSVYVDGTLLWNLRLRNSFNEELDEISHFYFGAYDEQLSSRKIHATVANVFLYNR 675
Query: 200 KL 201
L
Sbjct: 676 PL 677
>M.Javanica_Scaff3940g032026 on XP_808957 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1446
Score = 24.6 bits (52), Expect = 6.2, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 27/62 (43%)
Query: 140 LFDEIDKIYKKNLSKFRLTKFEKFNEYLVSLEHFKFKTILEKLEMCSSKSKVSEIFGNNQ 199
+ D + +Y + + FNE L ++ HF F E+L + V+ +F N+
Sbjct: 615 MHDGVGSVYVDGTLLWNMRLKNSFNEGLGTVSHFYFGAYDEQLSSGKIHATVANVFLYNR 674
Query: 200 KL 201
L
Sbjct: 675 PL 676
>M.Javanica_Scaff3940g032026 on XP_808394 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 912
Score = 24.6 bits (52), Expect = 6.5, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 163 FNEYLVSLEHFKFKTILEKLEMCSSKSKVSEIFGNNQKL 201
FNE L ++ HF F E+L + V+ +F N+ L
Sbjct: 638 FNEGLNTVSHFYFGAYDEQLSSGKIHATVANVFLYNRPL 676
>M.Javanica_Scaff3940g032026 on XP_810391 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 885
Score = 24.6 bits (52), Expect = 7.1, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 163 FNEYLVSLEHFKFKTILEKLEMCSSKSKVSEIFGNNQKL 201
FNE L ++ HF F E+L + V+ +F N+ L
Sbjct: 637 FNEGLDTVSHFYFGAYDEQLSSGKIHATVANVFLYNRPL 675
>M.Javanica_Scaff3940g032026 on XP_815706 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 907
Score = 24.6 bits (52), Expect = 7.1, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 163 FNEYLVSLEHFKFKTILEKLEMCSSKSKVSEIFGNNQKL 201
FNE L ++ HF F E+L + V+ +F N+ L
Sbjct: 639 FNEGLDTVSHFYFGAYDEQLSSGKIHATVANVFLYNRPL 677
>M.Javanica_Scaff3940g032026 on XP_815707 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 907
Score = 24.6 bits (52), Expect = 7.1, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 163 FNEYLVSLEHFKFKTILEKLEMCSSKSKVSEIFGNNQKL 201
FNE L ++ HF F E+L + V+ +F N+ L
Sbjct: 639 FNEGLDTVSHFYFGAYDEQLSSGKIHATVANVFLYNRPL 677
>M.Javanica_Scaff3940g032026 on XP_804330 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 910
Score = 24.6 bits (52), Expect = 7.1, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 163 FNEYLVSLEHFKFKTILEKLEMCSSKSKVSEIFGNNQKL 201
FNE L ++ HF F E+L + V+ +F N+ L
Sbjct: 639 FNEGLDTVSHFYFGAYDEQLSSGKIHATVANVFLYNRPL 677
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff28044g094533
(77 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_816570 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.2
>M.Javanica_Scaff28044g094533 on XP_816570 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 718
Score = 22.7 bits (47), Expect = 3.2, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 5 YCFTFLFSLFIFAVSLLLVSSTPIYGPEMSQP 36
Y F+F+ ++ I + STP+ G + P
Sbjct: 552 YSFSFVATVVIAETPAGSIKSTPLVGASLEDP 583
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff25575g091109
(77 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAK31223 variable surface protein 0a (Establishment) [Giardia... 25 0.47
AAK31233 variable surface protein 14g (Establishment) [Giardi... 25 0.48
AAK31228 variable surface protein 14b (Establishment) [Giardi... 25 0.54
AAK31238 variable surface protein 21f (Establishment) [Giardi... 24 0.72
AAK31241 variable surface protein 42c (Establishment) [Giardi... 24 0.73
AAK31231 variable surface protein 14e (Establishment) [Giardi... 24 0.85
AAK31227 variable surface protein 14a (Establishment) [Giardi... 24 0.86
AAK31245 variable surface protein IVc (Establishment) [Giardi... 24 0.86
AAK31229 variable surface protein 14c (Establishment) [Giardi... 24 0.88
AAK31244 variable surface protein IVa (Establishment) [Giardi... 23 1.4
AAF14193 SBP3 (Others) [Babesia bovis] 24 1.5
>M.Javanica_Scaff25575g091109 on AAK31223 variable surface protein 0a (Establishment) [Giardia
duodenalis]
Length = 126
Score = 24.6 bits (52), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 9 GILFCLTCQRPTQIHSPCSCYI 30
G+ C++C PT P +CY+
Sbjct: 63 GVPNCVSCAAPTSNSGPVTCYV 84
>M.Javanica_Scaff25575g091109 on AAK31233 variable surface protein 14g (Establishment) [Giardia
duodenalis]
Length = 126
Score = 24.6 bits (52), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 9 GILFCLTCQRPTQIHSPCSCYI 30
G+ C++C PT P +CY+
Sbjct: 63 GVPNCVSCAAPTSNSGPVTCYV 84
>M.Javanica_Scaff25575g091109 on AAK31228 variable surface protein 14b (Establishment) [Giardia
duodenalis]
Length = 126
Score = 24.6 bits (52), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 9 GILFCLTCQRPTQIHSPCSCYI 30
G+ C++C PT P +CY+
Sbjct: 63 GVPNCVSCAAPTSNSGPVTCYV 84
>M.Javanica_Scaff25575g091109 on AAK31238 variable surface protein 21f (Establishment) [Giardia
duodenalis]
Length = 128
Score = 24.3 bits (51), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 9 GILFCLTCQRPTQIHSPCSCYI 30
G+ C++C PT P +CY+
Sbjct: 65 GVPNCVSCAPPTGNSGPVTCYV 86
>M.Javanica_Scaff25575g091109 on AAK31241 variable surface protein 42c (Establishment) [Giardia
duodenalis]
Length = 128
Score = 24.3 bits (51), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 9 GILFCLTCQRPTQIHSPCSCYI 30
G+ C++C+ P+ P +CY+
Sbjct: 65 GVPNCVSCKEPSGGPGPVTCYV 86
>M.Javanica_Scaff25575g091109 on AAK31231 variable surface protein 14e (Establishment) [Giardia
duodenalis]
Length = 157
Score = 24.3 bits (51), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 6/22 (27%), Positives = 15/22 (68%)
Query: 9 GILFCLTCQRPTQIHSPCSCYI 30
G+ C++C++P+ + +CY+
Sbjct: 94 GVENCISCEKPSNGNGAVTCYV 115
>M.Javanica_Scaff25575g091109 on AAK31227 variable surface protein 14a (Establishment) [Giardia
duodenalis]
Length = 157
Score = 24.3 bits (51), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 6/22 (27%), Positives = 15/22 (68%)
Query: 9 GILFCLTCQRPTQIHSPCSCYI 30
G+ C++C++P+ + +CY+
Sbjct: 94 GVENCISCEKPSNGNGAVTCYV 115
>M.Javanica_Scaff25575g091109 on AAK31245 variable surface protein IVc (Establishment) [Giardia
duodenalis]
Length = 157
Score = 24.3 bits (51), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 6/22 (27%), Positives = 15/22 (68%)
Query: 9 GILFCLTCQRPTQIHSPCSCYI 30
G+ C++C++P+ + +CY+
Sbjct: 94 GVENCISCEKPSNGNGAVTCYV 115
>M.Javanica_Scaff25575g091109 on AAK31229 variable surface protein 14c (Establishment) [Giardia
duodenalis]
Length = 158
Score = 24.3 bits (51), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 6/22 (27%), Positives = 15/22 (68%)
Query: 9 GILFCLTCQRPTQIHSPCSCYI 30
G+ C++C++P+ + +CY+
Sbjct: 95 GVENCISCEKPSNGNGAVTCYV 116
>M.Javanica_Scaff25575g091109 on AAK31244 variable surface protein IVa (Establishment) [Giardia
duodenalis]
Length = 120
Score = 23.5 bits (49), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 6/22 (27%), Positives = 15/22 (68%)
Query: 9 GILFCLTCQRPTQIHSPCSCYI 30
G+ C++C++P+ + +CY+
Sbjct: 67 GVKNCISCEKPSSGNGAVTCYV 88
>M.Javanica_Scaff25575g091109 on AAF14193 SBP3 (Others) [Babesia bovis]
Length = 1089
Score = 23.9 bits (50), Expect = 1.5, Method: Composition-based stats.
Identities = 7/17 (41%), Positives = 8/17 (47%)
Query: 16 CQRPTQIHSPCSCYILC 32
C T+ H PC C C
Sbjct: 644 CSGSTECHCPCKCKCTC 660
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3472g029345
(306 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAX07972 alpha-18 giardin (Others) [Giardia duodenalis] 29 0.28
XP_845141 VSG (Establishment) [Trypanosoma brucei] 26 2.4
XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum] 27 2.4
XP_001350082 Rh2b (Adhesin) [Plasmodium falciparum] 26 4.1
XP_001610714 variant erythrocyte surface antigen-1, alpha subun... 25 6.3
>M.Javanica_Scaff3472g029345 on AAX07972 alpha-18 giardin (Others) [Giardia duodenalis]
Length = 255
Score = 28.9 bits (63), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 43/109 (39%), Gaps = 24/109 (22%)
Query: 85 KVGQFIQNFANPAKLMS-----WLPMK----------FQDYIPEGWRDKIITIITTELDK 129
VG I+ +P+ S WLP K F++ +P IT E +
Sbjct: 45 SVGDHIRKLMSPSSSTSLLINMWLPTKILRLRVLERNFKELVPLELAHCAITCPQEEFVE 104
Query: 130 LAAVWDALAKYKTLEHVWKALKRNTPTLASLLEDAWKIIKQRWTKFNGG 178
+ +++ AK ++ ++R + + WK + Q+W FN G
Sbjct: 105 ICDIYNTTAK----ASLYAGIRRQC-----IGPEPWKYLVQQWVTFNHG 144
>M.Javanica_Scaff3472g029345 on XP_845141 VSG (Establishment) [Trypanosoma brucei]
Length = 486
Score = 26.2 bits (56), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Query: 17 SNLIETSTSQQPDFQQMFGSLLSGVQSALKEIQKPKGSGGNDTDDEDDDE 66
SN I+T+ Q++ G G++++L+ + K SGG D D DE
Sbjct: 106 SNFIKTALEATATTQELTG----GIEASLQVFKSAKHSGGYCLADTDTDE 151
>M.Javanica_Scaff3472g029345 on XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2980
Score = 26.6 bits (57), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 24/61 (39%), Gaps = 4/61 (6%)
Query: 144 EHVWKALKRNTPTLASLLE----DAWKIIKQRWTKFNGGLEPEAKEYMHDVKTSFGHWLS 199
+ VWKA+ N P A+ E +K + NGG P +Y+ F W
Sbjct: 260 DQVWKAITCNAPKDANYFEYNSGKFFKFSNDQCGHNNGGAPPTNLDYVPQFVRWFEEWAD 319
Query: 200 D 200
D
Sbjct: 320 D 320
>M.Javanica_Scaff3472g029345 on XP_001350082 Rh2b (Adhesin) [Plasmodium falciparum]
Length = 1115
Score = 25.8 bits (55), Expect = 4.1, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 248 LAGEEELKKTRRRRKKRKKRK--MKRRKMRKEKVRKKLRVNCNGERGTEKKRE 298
L EEELK+ + R +R+K++ K ++RK++ K+ + N E +KK E
Sbjct: 607 LQKEEELKRQEQERLEREKQEQLQKEEELRKKEQEKQQQRNIQ-ELEEQKKPE 658
>M.Javanica_Scaff3472g029345 on XP_001610714 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1231
Score = 25.0 bits (53), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 121 TIITTELDKLAAVWDALAKYKTLEHVWKA 149
+++ T +D+LA V AL + ++ WK
Sbjct: 84 SVVRTYIDQLAQVLSALVGWSKIDKCWKG 112
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2938g026185
(271 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff795g009970
(62 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609034 variant erythrocyte surface antigen-1, alpha subun... 24 0.64
AAK31236 variable surface protein 21d (Establishment) [Giardi... 22 2.5
XP_001609040 variant erythrocyte surface antigen-1, alpha subun... 22 3.7
XP_001611366 variant erythrocyte surface antigen-1, beta subuni... 22 3.9
>M.Javanica_Scaff795g009970 on XP_001609034 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1313
Score = 24.3 bits (51), Expect = 0.64, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 15/37 (40%)
Query: 22 FANIKCSPPRRCFCQSCGNGGGATSSNDPENIDNFAS 58
F N++C R C C G T+ N N + S
Sbjct: 1109 FRNVECRGCRECDPNKCKKGNHGTTGNSQCNCSSIVS 1145
>M.Javanica_Scaff795g009970 on AAK31236 variable surface protein 21d (Establishment) [Giardia
duodenalis]
Length = 127
Score = 22.3 bits (46), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 10/16 (62%), Positives = 11/16 (68%)
Query: 35 CQSCGNGGGATSSNDP 50
CQ+C NG ATS N P
Sbjct: 7 CQTCANGQNATSGNCP 22
>M.Javanica_Scaff795g009970 on XP_001609040 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1335
Score = 21.9 bits (45), Expect = 3.7, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 13/27 (48%), Gaps = 3/27 (11%)
Query: 26 KCSPPRR---CFCQSCGNGGGATSSND 49
KC P C CQ G G TS++D
Sbjct: 185 KCGKPGAGGGCQCQCKGGASGCTSASD 211
>M.Javanica_Scaff795g009970 on XP_001611366 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1173
Score = 21.9 bits (45), Expect = 3.9, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 31 RRCFCQSCGNGGGATSSNDPENIDNFASDLCH 62
++C C G G SND + +F D H
Sbjct: 678 QKCNCLGKGASQGGHGSNDGSPLQSFLCDSIH 709
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff26284g092145
(241 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_814930 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.28
XP_001609566 variant erythrocyte surface antigen-1, beta subuni... 27 1.6
XP_814927 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.3
XP_804289 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 5.3
>M.Javanica_Scaff26284g092145 on XP_814930 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 938
Score = 28.9 bits (63), Expect = 0.28, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 26/56 (46%)
Query: 185 KLKPVKPPPKKEPEAPETKKDKKQVSDDETKKAEKVKEIKEGEKKRTKKESSKTSE 240
+LK +K K+ + +DKK+ D E KK E K+G K+ S SE
Sbjct: 754 ELKMIKEVEDKKEKGSGDSEDKKESGDSEDKKESGDSEDKKGSGDSEDKKESGDSE 809
>M.Javanica_Scaff26284g092145 on XP_001609566 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1062
Score = 26.6 bits (57), Expect = 1.6, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 193 PKKEPEAPETKKDKKQVSDDETKKAEKVKEIKEGE 227
PK + + E K +K + D TK E+KEGE
Sbjct: 466 PKHKEKPHERCKLEKSANTDTTKAQSSTSELKEGE 500
>M.Javanica_Scaff26284g092145 on XP_814927 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 759
Score = 25.4 bits (54), Expect = 3.3, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 185 KLKPVKPPPKKEPEAPETKKDKKQVSDDETKKAEKVKEIKEGEKKRTKKE 234
+LK +K K+ + +DKK+ D E KK E K+G + +E
Sbjct: 690 ELKMIKEVEDKKEKGSGDSEDKKESGDSEDKKESGDSEDKKGSGDGSMRE 739
>M.Javanica_Scaff26284g092145 on XP_804289 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1048
Score = 25.0 bits (53), Expect = 5.3, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 24/44 (54%)
Query: 130 LFLDKNGDLLPDFKNKKAEYKNYAYYYPSPADILNSMKEVIAHY 173
L + KN +L+ ++NKK + +Y+ + L +KEV+ +
Sbjct: 422 LLMKKNNELISLYENKKGDDGSYSLVAVRLTEKLERIKEVVKKW 465
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff26028g091781
(193 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_820184 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.61
>M.Javanica_Scaff26028g091781 on XP_820184 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1050
Score = 27.3 bits (59), Expect = 0.61, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Query: 39 PESEERPFFID--IPSGPPPRSILLDTVVEPPDAKLEIANVRSNNLAQ 84
PE + R +D +P+ PP + +V EP A N R ++ AQ
Sbjct: 757 PEKQRRKNGVDDPVPAAPPSTVVAGSSVSEPAIAAESAGNDRPDDNAQ 804
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5662g040468
(314 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001610721 variant erythrocyte surface antigen-1, alpha subun... 27 1.4
XP_810023 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 3.8
XP_817382 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 4.2
XP_806556 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 5.3
XP_001609040 variant erythrocyte surface antigen-1, alpha subun... 25 7.8
>M.Javanica_Scaff5662g040468 on XP_001610721 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1331
Score = 27.3 bits (59), Expect = 1.4, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 53 GNKKFGKNNKNRNDQKEENKELDIQSKDGSVSG 85
GNK+ GKN K++N + E +K+ + D + G
Sbjct: 992 GNKEEGKNKKDQNKKCEHDKDPSKKEDDDYICG 1024
>M.Javanica_Scaff5662g040468 on XP_810023 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 804
Score = 25.8 bits (55), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 15/75 (20%)
Query: 13 YLLIVNAKINGKRSDENFNNIQPDSNENLSNLGINSGKSGGNKKFGKNNKNRNDQK---- 68
+ L+ I+G +P N + LG+ +G +GG K FG + + +
Sbjct: 538 FTLVATVSIDG----------EPKGNTPIPLLGVRAGSNGGKKLFGLSYNGGDKWQLLCG 587
Query: 69 -EENKELDIQSKDGS 82
E NKE+ K G+
Sbjct: 588 DETNKEISSTWKRGT 602
>M.Javanica_Scaff5662g040468 on XP_817382 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 836
Score = 25.8 bits (55), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 10/46 (21%)
Query: 13 YLLIVNAKINGKRSDENFNNIQPDSNENLSNLGINSGKSGGNKKFG 58
+ L+ I+G +P N + LG+ +G +GG K FG
Sbjct: 576 FTLVATVSIDG----------EPKGNTPIPLLGVRAGSNGGKKLFG 611
>M.Javanica_Scaff5662g040468 on XP_806556 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 844
Score = 25.4 bits (54), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 10/46 (21%)
Query: 13 YLLIVNAKINGKRSDENFNNIQPDSNENLSNLGINSGKSGGNKKFG 58
+ L+ I+G +P N + LG+ +G +GG K FG
Sbjct: 584 FTLVATVSIDG----------EPKGNTPIPLLGVRAGSNGGKKLFG 619
>M.Javanica_Scaff5662g040468 on XP_001609040 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1335
Score = 25.0 bits (53), Expect = 7.8, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 208 RKDKQNWADRQGKIISDLYKKFEQLLQQKEQQFRIERQRIAQT 250
RKD + DR + I L+K E L + E+Q + E + +T
Sbjct: 762 RKDYSSAKDRISEAIDGLHKVLEILKEGVEKQIKEEAKEAKKT 804
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7064g046584
(377 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum] 34 0.018
AAL38222 PfNBP1 (Adhesin) [Plasmodium falciparum] 28 1.3
XP_821693 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.8
XP_001351876 PfEMP1 (Establishment) [Plasmodium falciparum] 27 2.0
AAL38220 PfNBP1 (Adhesin) [Plasmodium falciparum] 27 2.4
XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum] 26 4.2
AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum] 25 7.1
AAL38218 PfNBP1 (Adhesin) [Plasmodium falciparum] 25 7.2
>M.Javanica_Scaff7064g046584 on XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3346
Score = 33.9 bits (76), Expect = 0.018, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 7/89 (7%)
Query: 287 TPVSVVSPKKPPRPESSSPAPRPSPPSGETPCVEELTSTSSPLAQSTPVSVVSPKKPP-- 344
T V ++ P E P+ P+ SGE E + +S P P + +P++ P
Sbjct: 2772 TSVDTTQDEEEPASEGGGPSGSPTEESGEP---RENSDSSDPKPDQNPEA--NPEQTPIL 2826
Query: 345 QPESSSPAPRPSPPSPRGQGSTIGSPAQS 373
+PE +P P RG G ++G +S
Sbjct: 2827 KPEEEAPPKSKPPDGDRGVGRSLGPTPRS 2855
Score = 30.8 bits (68), Expect = 0.14, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 7/89 (7%)
Query: 200 TPVAVVSPKKPPQPESSSSAPRPSPPSGETPCVEELTSSSSPPAQSTPVSVVSPKKPP-- 257
T V ++ P E + P+ SGE E + SS P P + +P++ P
Sbjct: 2772 TSVDTTQDEEEPASEGGGPSGSPTEESGEP---RENSDSSDPKPDQNPEA--NPEQTPIL 2826
Query: 258 QPESSSPAPRPSPPSPRGQGSTTGSPAQS 286
+PE +P P RG G + G +S
Sbjct: 2827 KPEEEAPPKSKPPDGDRGVGRSLGPTPRS 2855
>M.Javanica_Scaff7064g046584 on AAL38222 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2976
Score = 27.7 bits (60), Expect = 1.3, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 51/128 (39%), Gaps = 15/128 (11%)
Query: 58 ESDSQSSSSSNSNEHH---SASNSRSESKSGSHEHHKRQHKHIRGNGGEEPPCEDGNSTT 114
+ D+Q+ N + H + N+ S +S +E K Q+K+I T
Sbjct: 2786 QHDNQNVEQKNKIKDHNLITKPNNNSSEESHQNEQMKEQNKNILEK-----------QTR 2834
Query: 115 TIKPQKVKRKHHGSKSSSSSSHHSKSKSASNSHS-SEHKKSKSHSKSESHEHHRHKHHHR 173
IKP V +H + + + + K + S HK + + +S ++H+ +
Sbjct: 2835 NIKPHHVHNHNHNHNHNHNQNQNQKDSTKLQEQDISTHKLHNTIHEQQSKDNHQGNREKK 2894
Query: 174 HHNHKHDK 181
N H++
Sbjct: 2895 QKNGNHER 2902
>M.Javanica_Scaff7064g046584 on XP_821693 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 834
Score = 27.3 bits (59), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Query: 221 RPSPPSGETPCVEELTSSSSPPAQSTPVSVVSPKKPPQ-PESSSPAPRPSPPSPRGQGST 279
RP SGE VEE + SP + + + KP + PE RP + Q +T
Sbjct: 728 RPFSFSGENADVEE--DADSPSVEGEQIVALLATKPSEAPEEKMALQRPRQETEAQQITT 785
Query: 280 TGSPAQSTPV 289
G PA + V
Sbjct: 786 GGKPATTQQV 795
>M.Javanica_Scaff7064g046584 on XP_001351876 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3164
Score = 27.3 bits (59), Expect = 2.0, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 29/76 (38%), Gaps = 5/76 (6%)
Query: 282 SPAQSTPVSVVSPKKPPRPESSSPAPRPSPPSGETPCVEELTSTSSPLAQSTPVSVVSPK 341
S + TP P +P R A P+ PS E+ ++ + P PK
Sbjct: 1973 STKKKTPSRKTQPSQPAR---EMQADEPASPSRRASLKEKAVASKKEEKTARPTK--PPK 2027
Query: 342 KPPQPESSSPAPRPSP 357
K QP + AP +P
Sbjct: 2028 KVEQPPTGIRAPTRTP 2043
>M.Javanica_Scaff7064g046584 on AAL38220 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2957
Score = 26.9 bits (58), Expect = 2.4, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 49/127 (38%), Gaps = 19/127 (14%)
Query: 58 ESDSQSSSSSNSNEHH---SASNSRSESKSGSHEHHKRQHKHIRGNGGEEPPCEDGNSTT 114
+ D+Q+ N + H + N+ S +S +E K Q+K+I T
Sbjct: 2773 QHDNQNVEQKNKIKDHNLITKPNNNSSEESHQNEQMKEQNKNILEK-----------QTR 2821
Query: 115 TIKPQKVKRKHHGSKSSSSSSHHSKSKSASNSHSSEHKKSKSHSKSESHEHHRHKHHHRH 174
IKP V +H + S + + S HK + + +S ++H+ +
Sbjct: 2822 NIKPHHVHNHNHNHNQNQKDSTKLQEQDIST-----HKLHNTIHEQQSKDNHQGNREKKQ 2876
Query: 175 HNHKHDK 181
N H++
Sbjct: 2877 KNGNHER 2883
>M.Javanica_Scaff7064g046584 on XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2238
Score = 26.2 bits (56), Expect = 4.2, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 12/87 (13%)
Query: 215 SSSSAPRPSPPSGETPCVEELTSSSSPPAQSTPVSVVSPKKP-PQPESSSPAPRPSPPSP 273
++ AP+ +TP +E PAQ+ +PKKP E +P + PP
Sbjct: 1650 NTVEAPKICDDVLKTPPKQEEGEEKCEPAQT------APKKPAADSERQTPEEKLPPPPA 1703
Query: 274 RGQGSTTGSPAQSTPVSVVSPKKPPRP 300
+ A+ T PK+ PRP
Sbjct: 1704 AKEEKPPKQNAEKT-----KPKRSPRP 1725
>M.Javanica_Scaff7064g046584 on AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2969
Score = 25.4 bits (54), Expect = 7.1, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 49/132 (37%), Gaps = 19/132 (14%)
Query: 58 ESDSQSSSSSNSNEHH---SASNSRSESKSGSHEHHKRQHKHIRGNGGEEPPCEDGNSTT 114
+ D+Q+ N + H + N+ S +S +E K Q+K+I T
Sbjct: 2775 QHDNQNVEQKNKIKDHNLITKPNNNSSEESHQNEQMKEQNKNILEK-----------QTR 2823
Query: 115 TIKPQKVKRKHHGSKSSSSS-----SHHSKSKSASNSHSSEHKKSKSHSKSESHEHHRHK 169
IKP V +H + + + S S HK + + +S ++H+
Sbjct: 2824 NIKPHHVHNHNHNHNHNHNHNHNHNQNQKDSTKLQEQDISTHKLHNTIHEQQSKDNHQGN 2883
Query: 170 HHHRHHNHKHDK 181
+ N H++
Sbjct: 2884 REKKQKNGNHER 2895
>M.Javanica_Scaff7064g046584 on AAL38218 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2977
Score = 25.4 bits (54), Expect = 7.2, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 49/132 (37%), Gaps = 19/132 (14%)
Query: 58 ESDSQSSSSSNSNEHH---SASNSRSESKSGSHEHHKRQHKHIRGNGGEEPPCEDGNSTT 114
+ D+Q+ N + H + N+ S +S +E K Q+K+I T
Sbjct: 2783 QHDNQNVEQKNKIKDHNLITKPNNNSSEESHQNEQMKEQNKNILEK-----------QTR 2831
Query: 115 TIKPQKVKRKHHGSKSSSSS-----SHHSKSKSASNSHSSEHKKSKSHSKSESHEHHRHK 169
IKP V +H + + + S S HK + + +S ++H+
Sbjct: 2832 NIKPHHVHNHNHNHNHNHNHNHNHNQNQKDSTKLQEQDISTHKLHNTIHEQQSKDNHQGN 2891
Query: 170 HHHRHHNHKHDK 181
+ N H++
Sbjct: 2892 REKKQKNGNHER 2903
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff29163g096010
(84 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001610713 variant erythrocyte surface antigen-1, alpha subun... 24 1.0
XP_814441 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.4
XP_001350936 PfEMP1 (Establishment) [Plasmodium falciparum] 22 4.9
AAB63303 MIC2 (Invasion) [Toxoplasma gondii] 22 6.2
>M.Javanica_Scaff29163g096010 on XP_001610713 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1294
Score = 24.3 bits (51), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 30 GGYKTNKACKGLGGNSPPE 48
GG K+ CKG GGN P
Sbjct: 88 GGEKSGSQCKGTGGNDNPH 106
>M.Javanica_Scaff29163g096010 on XP_814441 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 931
Score = 23.5 bits (49), Expect = 2.4, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 20/47 (42%)
Query: 14 ISQMFFETAIAPAVCPGGYKTNKACKGLGGNSPPECKDYIGPDKVNG 60
I+ + A P+V G + GG P E ++ +G VNG
Sbjct: 722 IAALIPNKAPTPSVVDGPSQGTAIRSSPGGGRPEEPRESMGSSGVNG 768
>M.Javanica_Scaff29163g096010 on XP_001350936 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2163
Score = 22.3 bits (46), Expect = 4.9, Method: Composition-based stats.
Identities = 9/15 (60%), Positives = 9/15 (60%)
Query: 33 KTNKACKGLGGNSPP 47
K NK C G GGN P
Sbjct: 544 KYNKFCNGNGGNGAP 558
>M.Javanica_Scaff29163g096010 on AAB63303 MIC2 (Invasion) [Toxoplasma gondii]
Length = 255
Score = 21.9 bits (45), Expect = 6.2, Method: Composition-based stats.
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 53 IGPDKVNGKLVKYTKCKHI 71
IGP++VN +V Y+ H+
Sbjct: 108 IGPEEVNNAVVTYSTDVHL 126
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2578g023882
(188 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_821669 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.084
XP_807448 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.75
XP_805896 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.0
XP_803132 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.0
XP_001348165 RESA (Others) [plasmodium falciparum] 25 4.3
XP_001351321 PfEMP1 (Establishment) [Plasmodium falciparum] 23 9.6
>M.Javanica_Scaff2578g023882 on XP_821669 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 879
Score = 30.0 bits (66), Expect = 0.084, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 16/64 (25%)
Query: 66 GKY---LAQRKRILEKDEKEMEKVESTTIASVQHKEKDEEQAVEEGLQPS----IIRPPT 118
GKY +A + +E D K E +++ KD+ Q +EEG+ PS + RP T
Sbjct: 114 GKYFTGIASQLLSMETDNKPEEVLKNA---------KDKTQVLEEGVSPSKKVDVSRPTT 164
Query: 119 VENG 122
V NG
Sbjct: 165 VVNG 168
>M.Javanica_Scaff2578g023882 on XP_807448 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 831
Score = 26.9 bits (58), Expect = 0.75, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 7/70 (10%)
Query: 26 SSTSTQDININFERIKREIKE-----NTSKNTT-NSEEKENVNDRYGKYLAQRKRILEKD 79
S TS ++ N+ ++ +K N NT ++N +D + Y A +RI E D
Sbjct: 575 SYTSERNWNLTLHKMDFLVKPSGDVGNWETNTAIRVTVRKNNDDEWFVY-ANGRRIYETD 633
Query: 80 EKEMEKVEST 89
EKEM K +T
Sbjct: 634 EKEMAKHRNT 643
>M.Javanica_Scaff2578g023882 on XP_805896 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 692
Score = 25.8 bits (55), Expect = 2.0, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 11/65 (16%)
Query: 30 TQDININFERIKREIKENTSKNTTNSE---------EKENVNDRYGKYLAQRKRILEKDE 80
T + N F K+E S + N E +K+N ND + Y A +RI E DE
Sbjct: 577 TSERNWKFTLHKKEFLVKPSGDVGNWETNTAIQVTVQKDN-NDEWFVY-ANGRRIYETDE 634
Query: 81 KEMEK 85
KEM +
Sbjct: 635 KEMAQ 639
>M.Javanica_Scaff2578g023882 on XP_803132 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 721
Score = 24.6 bits (52), Expect = 4.0, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 11/65 (16%)
Query: 30 TQDININFERIKREIKENTSKNTTNSE---------EKENVNDRYGKYLAQRKRILEKDE 80
T + N NF K+E S + N E +K+N +D + Y A ++I E DE
Sbjct: 577 TSERNWNFTLHKKEFLVKPSGDVGNWETNTAIRVTVQKDN-DDEWFVY-ANGRKIYETDE 634
Query: 81 KEMEK 85
KEM +
Sbjct: 635 KEMAQ 639
>M.Javanica_Scaff2578g023882 on XP_001348165 RESA (Others) [plasmodium falciparum]
Length = 1085
Score = 24.6 bits (52), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 76 LEKDEKEMEKVESTTIASVQHKEK---DEEQAVEEGLQPSIIRPPTVENGYVESPLYQRQ 132
+E+ + E VE T+A +H E+ +E E + + PTV +VE P Q
Sbjct: 449 VEEHTADDEHVEEPTVADDEHVEEPTVADEHVEEPTVAEEHVEEPTVAEEHVEEPASDVQ 508
Query: 133 Q 133
Q
Sbjct: 509 Q 509
>M.Javanica_Scaff2578g023882 on XP_001351321 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3467
Score = 23.5 bits (49), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 12/66 (18%)
Query: 28 TSTQDININFERIKREIKE----NTSKNTTNSEEKENVN--------DRYGKYLAQRKRI 75
+ + I+I E +KR+ E N +KNT+N+ +N N D K+L +R+ +
Sbjct: 3265 SGNKHIDIYDEVLKRKENELFGTNHTKNTSNNSVAKNTNSDSIMNQLDLLHKWLDRRRNM 3324
Query: 76 LEKDEK 81
EK EK
Sbjct: 3325 CEKWEK 3330
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff31289g098521
(168 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_803413 VSG (Establishment) [Trypanosoma brucei] 25 2.6
XP_001350415 PfEMP1 (Establishment) [Plasmodium falciparum] 23 8.2
>M.Javanica_Scaff31289g098521 on XP_803413 VSG (Establishment) [Trypanosoma brucei]
Length = 486
Score = 25.0 bits (53), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
Query: 39 VKNMKEAGTDINLISNKINEWINELSETSHLRKLAEEYKPV 79
VK++ GTD I K W+N+LS+T KL ++ +P+
Sbjct: 342 VKDLLGKGTDS--IQTK---WLNDLSKTDSTLKLQDDAQPI 377
>M.Javanica_Scaff31289g098521 on XP_001350415 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3056
Score = 23.5 bits (49), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 1 MEWFNKLEGEPKTKALELMQTGCRELLKIILGED 34
+E K+ GE KTK + M+ ++ II G+D
Sbjct: 2406 VERLKKVYGEAKTKVVHAMKYSFADIGSIIKGDD 2439
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff367g005401
(285 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_805259 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.74
XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum] 27 2.1
AAN75043 Aldolase (Invasion) [Toxoplasma gondii] 25 6.4
XP_001347690 PfEMP1 (Establishment) [Plasmodium falciparum] 25 8.9
>M.Javanica_Scaff367g005401 on XP_805259 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 800
Score = 28.1 bits (61), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Query: 47 PDFWCDNYEIAQRCNVVQQCENFKRSTSSRPLTITLMFEALCPYCQR--YIANNLGSLLY 104
PD + ++ +V K + + PL ++ +A Y R Y A+N ++
Sbjct: 542 PDDNVRHISLSHNFTLVASVTIEKAPSENTPLLTAVLGDAGPEYFMRLSYTADNKWETMF 601
Query: 105 KFGNQTILELVPW 117
K G +T E PW
Sbjct: 602 KGGKKTTTESRPW 614
>M.Javanica_Scaff367g005401 on XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2178
Score = 26.6 bits (57), Expect = 2.1, Method: Composition-based stats.
Identities = 6/19 (31%), Positives = 14/19 (73%)
Query: 241 VCLPHLIQKWVNLRNKGWQ 259
+C+ ++KW+N++ K W+
Sbjct: 1461 ICINDCVEKWINIKKKEWE 1479
>M.Javanica_Scaff367g005401 on AAN75043 Aldolase (Invasion) [Toxoplasma gondii]
Length = 255
Score = 24.6 bits (52), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 137 CDANRLLSCVISEVSVSQSVQFTICFE 163
C ANRL+ V E+ S T+C E
Sbjct: 179 CQANRLVPIVEPEILTDGSHDITVCAE 205
>M.Javanica_Scaff367g005401 on XP_001347690 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 24.6 bits (52), Expect = 8.9, Method: Composition-based stats.
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 236 NAINNVCLPHLIQKWVNLRNKGW 258
N N+C+ + KW+ L+ + W
Sbjct: 1534 NGGTNICIKNCADKWIKLKKEEW 1556
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6963g046173
(352 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum] 29 0.44
>M.Javanica_Scaff6963g046173 on XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3954
Score = 29.3 bits (64), Expect = 0.44, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 7/99 (7%)
Query: 140 LLTEEQYSVYVKAETIASRTVFEDSASIRASQKSISIFVQTDKAIYKPGSDVHYRVIVVT 199
+++++ +Y++A+T +RT F D Q+ + F + K I + S R I VT
Sbjct: 1177 VISKKYEELYLQAKTAFARTAFPDDDP--DYQQVVEFFKELQKEINRSASQRSKRSIDVT 1234
Query: 200 ---PELT-PYSEPVS-LYIEDPNQNRIVDTPKIELKKGV 233
P LT PYS ++ E N V T E K GV
Sbjct: 1235 NTDPTLTSPYSSAAGYIHQEIGNVGCNVQTQFCEKKNGV 1273
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff707g009122
(75 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_810383 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.65
XP_814186 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.0
AAD13334 Sialidase homolog (Others) [Trypanosoma cruzi] 23 1.1
XP_001349207 EBA-175 (Adhesin) [Plasmodium falciparum] 23 3.5
XP_804261 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.4
XP_814492 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 6.0
XP_809960 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 6.4
XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum] 22 8.4
XP_815807 Trans-sialidase (Invasion) [Trypanosoma cruzi] 21 10.0
>M.Javanica_Scaff707g009122 on XP_810383 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 928
Score = 24.6 bits (52), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 40 KGLDDKECLKDDKKNFSELKEGFS 63
KG + KE LKD KK+ L+EG S
Sbjct: 131 KGNEPKEVLKDAKKDTQVLEEGTS 154
>M.Javanica_Scaff707g009122 on XP_814186 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 883
Score = 23.9 bits (50), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 40 KGLDDKECLKDDKKNFSELKEGFSG 64
KG + KE L+D KK L+EG SG
Sbjct: 130 KGNEPKELLEDAKKGTQVLEEGTSG 154
>M.Javanica_Scaff707g009122 on AAD13334 Sialidase homolog (Others) [Trypanosoma cruzi]
Length = 70
Score = 23.1 bits (48), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 7/36 (19%), Positives = 14/36 (38%)
Query: 11 CGCNSTNGEDENMQILEYSAGDYFKKRTWKGLDDKE 46
CGC + + E + ++ WKG ++
Sbjct: 19 CGCGAAHAEQAGATVDPFTGTTPISFANWKGFNEAR 54
>M.Javanica_Scaff707g009122 on XP_001349207 EBA-175 (Adhesin) [Plasmodium falciparum]
Length = 1462
Score = 22.7 bits (47), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 36 KRTWKGLDDKECLKDDKKNFSELKEGFSG 64
KR +K DDKE K K F+++++ G
Sbjct: 528 KRKYKNKDDKEVCKIINKTFADIRDIIGG 556
>M.Javanica_Scaff707g009122 on XP_804261 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 268
Score = 22.3 bits (46), Expect = 4.4, Method: Composition-based stats.
Identities = 9/11 (81%), Positives = 10/11 (90%)
Query: 59 KEGFSGIASKY 69
K GF+GIASKY
Sbjct: 129 KFGFTGIASKY 139
>M.Javanica_Scaff707g009122 on XP_814492 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 923
Score = 21.9 bits (45), Expect = 6.0, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 38 TWKGLDDKECLKDDKKNFSELKEGFSGIASKYE 70
T K + KE LKD K L+EG + I K +
Sbjct: 131 TAKANEPKEVLKDAKDKTQFLEEGTTAIKKKVD 163
>M.Javanica_Scaff707g009122 on XP_809960 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 890
Score = 21.9 bits (45), Expect = 6.4, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 38 TWKGLDDKECLKDDKKNFSELKEGFSGIASKYE 70
T K + E LKD K++ L+EG + I K +
Sbjct: 127 TAKANEPVEVLKDAKRDTQALEEGTTAIKKKVD 159
>M.Javanica_Scaff707g009122 on XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3346
Score = 21.6 bits (44), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 9/65 (13%)
Query: 17 NGEDEN---MQILEYS---AGDYFKKR-TWKGLDDKECLKDDKKNFSELKEGFSGIASK- 68
NG+++N + ++YS GD + R W+ D K+ +D K F ++KEG + +K
Sbjct: 2444 NGQNDNGAKCRAMKYSFADIGDIVRGRDLWEHNDFKKLERDLVKIFGKIKEGITDETTKK 2503
Query: 69 -YEKE 72
YEK+
Sbjct: 2504 QYEKD 2508
>M.Javanica_Scaff707g009122 on XP_815807 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 899
Score = 21.2 bits (43), Expect = 10.0, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 38 TWKGLDDKECLKDDKKNFSELKEGFSGIASKYE 70
T K + KE LKD ++ L+EG + I K +
Sbjct: 128 TAKANEPKEVLKDAIRDTQVLEEGTTAIKKKVD 160
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5323g038921
(89 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_815905 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.34
XP_810383 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.51
XP_818403 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.86
XP_821102 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.97
XP_821677 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.4
XP_001350082 Rh2b (Adhesin) [Plasmodium falciparum] 24 2.0
XP_815748 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.1
XP_822026 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.8
XP_817637 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.0
XP_822033 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.1
XP_814929 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.2
XP_816886 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.3
XP_811304 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.3
XP_805204 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.5
XP_813143 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 6.1
XP_816729 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 6.4
XP_819733 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 7.6
XP_810529 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 9.7
>M.Javanica_Scaff5323g038921 on XP_815905 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 888
Score = 25.8 bits (55), Expect = 0.34, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 37 KNSSDLDKNSLREVETIITQGNYSSIYEGGGKGGGKSK 74
K SSD + N+ + ++ GN SS Y G GG K
Sbjct: 628 KYSSDWETNTSEHMVVLLRNGNQSSAYVDGQPVGGDEK 665
>M.Javanica_Scaff5323g038921 on XP_810383 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 928
Score = 25.4 bits (54), Expect = 0.51, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 4/65 (6%)
Query: 24 GEGATYQFEKPPPKNSSDLDKNSLREVETIITQGNYSSIYEGGGKGGGKSKRSPQEWDLN 83
G AT P +D EV ++ G Y GG K + PQ+ D+N
Sbjct: 830 GTPATADANTPTATGKKQVDPADTTEVS--VSSGGYGET--AGGTDAQKEEVHPQDGDVN 885
Query: 84 AFAFS 88
A A S
Sbjct: 886 ATALS 890
>M.Javanica_Scaff5323g038921 on XP_818403 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 957
Score = 24.6 bits (52), Expect = 0.86, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 34 PPPKNSSDLDKNSLREVETIITQGNYSSIYEGGGKGGG 71
P ++SS L+K++ +V ++ G S Y G + GG
Sbjct: 645 PIKEHSSTLEKDTTHQVVIMLRNGTQGSAYVDGQRVGG 682
>M.Javanica_Scaff5323g038921 on XP_821102 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 929
Score = 24.6 bits (52), Expect = 0.97, Method: Composition-based stats.
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 25 EGATYQFEKPPPKNSSDLDK 44
EG T Q E PPP + D+ K
Sbjct: 798 EGTTLQEEVPPPLGTEDIPK 817
>M.Javanica_Scaff5323g038921 on XP_821677 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 861
Score = 24.3 bits (51), Expect = 1.4, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 37 KNSSDLDKNSLREVETIITQGNYSSIYEGGGKGGGKSKRSPQEWD 81
++SS L + V ++ GN SS Y GG + G +R + D
Sbjct: 619 EHSSHLGTENSEHVVILLRNGNQSSAYVGGKRVCGNVQRELKNTD 663
>M.Javanica_Scaff5323g038921 on XP_001350082 Rh2b (Adhesin) [Plasmodium falciparum]
Length = 1115
Score = 23.9 bits (50), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 55 TQGNYSSIYEGGGKGGGKSKRSPQEWD 81
TQ ++SSI + GG G ++ +E++
Sbjct: 921 TQKDFSSIIKDGGNKEGHAENESKEYE 947
>M.Javanica_Scaff5323g038921 on XP_815748 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 530
Score = 23.5 bits (49), Expect = 2.1, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 37 KNSSDLDKNSLREVETIITQGNYSSIYEGGGKGGGK 72
++SS + + +V ++ GN S+Y G + GG+
Sbjct: 495 EHSSTWEPEAAHQVAIVLQNGNQGSVYVDGQRVGGE 530
>M.Javanica_Scaff5323g038921 on XP_822026 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 888
Score = 23.5 bits (49), Expect = 2.8, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 37 KNSSDLDKNSLREVETIITQGNYSSIYEGGGKGGG 71
K SSD + + V ++ GN SS Y G GG
Sbjct: 623 KYSSDWETKTSEHVVVLLRNGNQSSAYVDGQPVGG 657
>M.Javanica_Scaff5323g038921 on XP_817637 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 986
Score = 23.1 bits (48), Expect = 3.0, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 25 EGATYQFEKPPPKNSSDLDK 44
EG + Q E PPP + D+ K
Sbjct: 855 EGTSLQEEVPPPLGTEDIPK 874
>M.Javanica_Scaff5323g038921 on XP_822033 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 446
Score = 23.1 bits (48), Expect = 3.1, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 37 KNSSDLDKNSLREVETIITQGNYSSIYEGGGKGGG 71
K SSD + + V ++ GN SS Y G GG
Sbjct: 194 KYSSDWETKTSEHVVVLLRNGNQSSAYVDGQPVGG 228
>M.Javanica_Scaff5323g038921 on XP_814929 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 833
Score = 23.1 bits (48), Expect = 3.2, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Query: 32 EKPPPKNSSDLDKNSLREVETIITQGNYSSIYEGGGKGGGKSKRSPQEWDLNAFAF 87
E P S + N +V ++ QGN +S+Y G G + E L FAF
Sbjct: 621 ETKPTTESRPWEPNKEHQV-ALMLQGNKASVYIDGESLGEEEVPLTDEKPLELFAF 675
>M.Javanica_Scaff5323g038921 on XP_816886 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 905
Score = 23.1 bits (48), Expect = 3.3, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 25 EGATYQFEKPPPKNSSDLDK 44
EG + Q E PPP + D+ K
Sbjct: 774 EGTSLQEEVPPPFGTEDIPK 793
>M.Javanica_Scaff5323g038921 on XP_811304 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 892
Score = 22.7 bits (47), Expect = 5.3, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 37 KNSSDLDKNSLREVETIITQGNYSSIYEGGGKGGGKS 73
++SS + V ++ GN SS Y G + GG +
Sbjct: 729 EHSSSWKPETTHHVAIVLRNGNQSSAYVDGQRVGGDA 765
>M.Javanica_Scaff5323g038921 on XP_805204 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 978
Score = 22.3 bits (46), Expect = 5.5, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Query: 25 EGATYQFEKPPPKNSSDLDKNSLREVETIITQGNYSSIYEG 65
EG T Q E PPP + + K +VE +I + +S E
Sbjct: 847 EGTTLQEEVPPPLGTEGIPK---ADVERLIHEEEATSPEEA 884
>M.Javanica_Scaff5323g038921 on XP_813143 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 795
Score = 22.3 bits (46), Expect = 6.1, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 37 KNSSDLDKNSLREVETIITQGNYSSIYEGGGKGGGKS 73
++SS + V ++ GN SS Y G + GG +
Sbjct: 632 EHSSSWKPETTHHVAIVLRNGNQSSAYVDGQRVGGDA 668
>M.Javanica_Scaff5323g038921 on XP_816729 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 890
Score = 22.3 bits (46), Expect = 6.4, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 33 KPPPKNSSDLDKNSLREVETIITQGNYSSIYEGGGKGGGKSK 74
K ++SS L + + V + GN SS Y G + GG +
Sbjct: 627 KTTTEHSSTLGTETTQHVVIMRRNGNQSSAYVNGKRLGGNEQ 668
>M.Javanica_Scaff5323g038921 on XP_819733 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 799
Score = 21.9 bits (45), Expect = 7.6, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Query: 32 EKPPPKNSSDLDKNSLREVETIITQGNYSSIYEGGGKGGGKSKRSPQEWDLNAFAF 87
EK P S + +V ++ QGN +S+Y G G + E L FAF
Sbjct: 625 EKKPTTESGTWEPKKEHQV-ALMLQGNKASVYVDGELLGEEEVPLTGEKPLELFAF 679
>M.Javanica_Scaff5323g038921 on XP_810529 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 791
Score = 21.9 bits (45), Expect = 9.7, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Query: 32 EKPPPKNSSDLDKNSLREVETIITQGNYSSIYEGGGKGGGKSKRSPQEWDLNAFAF 87
EK P S + +V ++ QGN +S+Y G G + E L FAF
Sbjct: 623 EKKPTTESRPWEAGKEHQV-ALMLQGNKASVYVDGELLGEEEVPLTGEKPLEIFAF 677
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff52g001107
(164 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_804819 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.2
XP_818480 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.6
>M.Javanica_Scaff52g001107 on XP_804819 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 266
Score = 25.0 bits (53), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 4 NPMSMSQSRLTFG-HRHLMSMSLCGIGPWSIFHAGKMSK 41
NP+ + RL G + LM +S G W + GK +K
Sbjct: 83 NPIPLMGVRLEGGGEKKLMELSYDKEGKWQVLCGGKTTK 121
>M.Javanica_Scaff52g001107 on XP_818480 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 926
Score = 23.9 bits (50), Expect = 5.6, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Query: 112 AKEIDSKTDKGQKFPSYLWLCAATAARRFGSYYNSAERGLGNNLYY 157
AKE DSK +KG+ +LWL T G + ++L Y
Sbjct: 380 AKETDSKKEKGE---LHLWLTDNTHIVDIGPVSGDDDDAAASSLLY 422
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff29947g096939
(88 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_810391 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.5
XP_814930 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.5
XP_814929 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.7
>M.Javanica_Scaff29947g096939 on XP_810391 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 885
Score = 23.5 bits (49), Expect = 2.5, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 20/38 (52%)
Query: 34 SPQASRKKRVVRFDSTRQDGKNNFGRPNVPRPFVSAPI 71
+P+ ++RV R++G+ RPN+ R ++ +
Sbjct: 10 APRTHNRRRVTGSSGRRREGEGEPQRPNMSRRVFTSAV 47
>M.Javanica_Scaff29947g096939 on XP_814930 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 938
Score = 23.5 bits (49), Expect = 2.5, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 34 SPQASRKKRVVRFDSTRQDGKNNFGRPNVPR 64
+P+ ++RV R+ G++ RPN+ R
Sbjct: 76 APRTHNRRRVTGSSGRREGGESEPQRPNMSR 106
>M.Javanica_Scaff29947g096939 on XP_814929 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 833
Score = 23.5 bits (49), Expect = 2.7, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 20/38 (52%)
Query: 34 SPQASRKKRVVRFDSTRQDGKNNFGRPNVPRPFVSAPI 71
+P+ ++RV R+ G++ RPN+ R ++ +
Sbjct: 10 TPRTHNRRRVTGSSGRREGGESEPQRPNMSRRLFNSTV 47
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff25882g091564
(137 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAX07978 alpha-6 giardin (Others) [Giardia duodenalis] 26 0.61
Q4VPP5 Giardin subunit alpha-6 (Others) [Giardia duodenalis] 26 0.61
XP_828097 VSG (Establishment) [Trypanosoma brucei] 25 2.5
>M.Javanica_Scaff25882g091564 on AAX07978 alpha-6 giardin (Others) [Giardia duodenalis]
Length = 255
Score = 26.2 bits (56), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 43 SINFKEVLNIGVPKDLEYKEIWTPYGHHW 71
+ ++K VLN + D+ KE WT HW
Sbjct: 116 TTDYKRVLNDDLLSDIGTKEQWTKVFKHW 144
>M.Javanica_Scaff25882g091564 on Q4VPP5 Giardin subunit alpha-6 (Others) [Giardia duodenalis]
Length = 255
Score = 26.2 bits (56), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 43 SINFKEVLNIGVPKDLEYKEIWTPYGHHW 71
+ ++K VLN + D+ KE WT HW
Sbjct: 116 TTDYKRVLNDDLLSDIGTKEQWTKVFKHW 144
>M.Javanica_Scaff25882g091564 on XP_828097 VSG (Establishment) [Trypanosoma brucei]
Length = 520
Score = 24.6 bits (52), Expect = 2.5, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 22/59 (37%), Gaps = 13/59 (22%)
Query: 14 NVTSKDSNLSEFKIWQCERAITLFRRKPPSINFKEVLNIGVPKDLEYKEIWTPYGHHWW 72
NVT+ S WQ +L R NF E L KD Y +IW WW
Sbjct: 74 NVTTSSSE------WQKIFDTSLSREA--GTNFPETL-----KDKPYADIWKANWASWW 119
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff386g005635
(268 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_813257 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.7
XP_815148 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.6
XP_815151 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.0
XP_001351513 PfEMP1 (Establishment) [Plasmodium falciparum] 25 8.2
XP_818312 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 9.2
XP_809580 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 9.3
>M.Javanica_Scaff386g005635 on XP_813257 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 903
Score = 26.6 bits (57), Expect = 1.7, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 124 SIPSINTGEDPRPFLEGERLGQQGKFGGPTNQYKEDW 160
SI + G+ P P + G+QGKF G + + + W
Sbjct: 586 SIDGVPKGDTPIPLMGVNMKGEQGKFFGLSYEKERKW 622
>M.Javanica_Scaff386g005635 on XP_815148 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 882
Score = 26.2 bits (56), Expect = 2.6, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 26/49 (53%)
Query: 124 SIPSINTGEDPRPFLEGERLGQQGKFGGPTNQYKEDWGHKFTRKENKEM 172
S+ + G++ P + + G+QGKF G + + ++ W K N+E+
Sbjct: 563 SVEKVPEGDNTIPLMGVKMKGEQGKFFGLSYEKEKKWILKCGDGTNEEL 611
>M.Javanica_Scaff386g005635 on XP_815151 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 894
Score = 25.0 bits (53), Expect = 6.0, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 124 SIPSINTGEDPRPFLEGERLGQQGKFGGPTNQYKEDW 160
SI + G++ P + + G+QGKF G + + ++ W
Sbjct: 586 SIDKVPEGDNTIPLMGVKMKGEQGKFFGLSYEKEKKW 622
>M.Javanica_Scaff386g005635 on XP_001351513 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2152
Score = 24.6 bits (52), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 7/38 (18%)
Query: 155 QYKEDWGHKFTRKEN-------KEMVGQVPNLISSFGS 185
++ E+WG F RK N KE G+ PN + S
Sbjct: 1170 RWLEEWGEDFCRKRNDKLKNVKKECRGKYPNGDKQYCS 1207
>M.Javanica_Scaff386g005635 on XP_818312 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 928
Score = 24.3 bits (51), Expect = 9.2, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Query: 105 REKEKEENTYLSQVNQLIPSIPSINTGEDPRPFLEGERLGQQ 146
+ E +NT+ +QL+ ++ TG++P+ LEG R Q
Sbjct: 114 KNGEGGDNTFTGIASQLL----TMETGKEPKEVLEGAREKTQ 151
>M.Javanica_Scaff386g005635 on XP_809580 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 776
Score = 24.3 bits (51), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 124 SIPSINTGEDPRPFLEGERLGQQGKFGGPTNQYKEDW 160
SI + G+ P P + G+QGKF G + + + W
Sbjct: 586 SIDGVPKGDTPIPLMGVNMKGEQGKFFGLSYEKERKW 622
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7465g048191
(598 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001348153 MAEBL (Adhesin) [Plasmodium falciparum] 27 4.6
XP_818196 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 5.9
>M.Javanica_Scaff7465g048191 on XP_001348153 MAEBL (Adhesin) [Plasmodium falciparum]
Length = 2054
Score = 26.9 bits (58), Expect = 4.6, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 8/108 (7%)
Query: 168 EYKQNSYEDWPNLNPLQVD-IQTTFEDLWENLDQSSNFLLIIFEKKVDSPAVIHSILDLW 226
EY +N +++PN N + + ++F + N+ S+F I +++ I++ L+
Sbjct: 501 EYNKNEVKNYPNNNISYIQKVHSSFVNNRFNIHSDSSFKPIHKMIQMN----IYTDNKLY 556
Query: 227 PNKQQIGVRRASSNSPLVSMLGISKFPYLALFKRGNQQSIFMDEFQGP 274
N Q + SN+ + M + P + + GN Q +M+ F P
Sbjct: 557 NNNNQ---KIKDSNNNMNGMSVTQRSPSIGENQNGNPQQKYMERFDIP 601
>M.Javanica_Scaff7465g048191 on XP_818196 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 841
Score = 26.2 bits (56), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 26/52 (50%)
Query: 179 NLNPLQVDIQTTFEDLWENLDQSSNFLLIIFEKKVDSPAVIHSILDLWPNKQ 230
++ P+ D T L+ + D + L+ ++EK+ HS+L + NKQ
Sbjct: 421 DIGPVSNDDVTASSLLYRSGDDNEEKLIALYEKEGSDDVTSHSLLTVPLNKQ 472
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2574g023851
(105 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609040 variant erythrocyte surface antigen-1, alpha subun... 26 0.58
XP_001609100 variant erythrocyte surface antigen-1, beta subuni... 25 0.72
XP_648254 SREHP (Adhesin) [Entamoeba histolytica] 25 1.2
XP_807740 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.2
XP_818963 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.8
XP_652394 Igl2 (Adhesin) [Entamoeba histolytica] 23 3.8
XP_815511 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.0
XP_804892 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.4
XP_828098 VSG (Establishment) [Trypanosoma brucei] 23 6.1
XP_001608670 variant erythrocyte surface antigen-1, alpha subun... 23 7.0
XP_809283 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 7.8
XP_001609449 variant erythrocyte surface antigen-1, beta subuni... 22 8.0
XP_818689 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 9.3
XP_827749 VSG (Establishment) [Trypanosoma brucei] 22 9.4
>M.Javanica_Scaff2574g023851 on XP_001609040 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1335
Score = 25.8 bits (55), Expect = 0.58, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 13/52 (25%)
Query: 61 EEKPEGKDEDSNTKIKEN------PQGKAKRGEDTI-------ASIREKRGE 99
+E EGKD+++ K+KE GKAK G D + A ++E +G+
Sbjct: 675 QEALEGKDKEAIKKVKEKLTEAKGALGKAKEGLDQVKDGLNGQAELKEAKGK 726
>M.Javanica_Scaff2574g023851 on XP_001609100 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1093
Score = 25.4 bits (54), Expect = 0.72, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 3 ILTTILIIQFSIGFALLIPPKEEEGSKIEGLAKEKPEEKPEVTKEGKRES 52
IL + + +S G+ L+ E SK+EG+ +K +EK E+ G+ +S
Sbjct: 410 ILYWLSALPYSKGYRELV---ERMQSKMEGILPKKEQEKGEMQLHGESQS 456
>M.Javanica_Scaff2574g023851 on XP_648254 SREHP (Adhesin) [Entamoeba histolytica]
Length = 233
Score = 24.6 bits (52), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 37 KPEEKPEVTKEGKRESEEKDELIPEEKPEGKDED 70
KP+ KPE + K E+ D+ P+ KPE D
Sbjct: 86 KPDNKPEASSSDKPEASSSDK--PDNKPEASSSD 117
Score = 24.3 bits (51), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Query: 22 PKEEEGSKIEGLAKEKPEEKPEVTK----EGKRESEEKDELIPEEKPEGKDED 70
P+ K E + +KP+ KPE + + K E+ D+ P+ KPE D
Sbjct: 91 PEASSSDKPEASSSDKPDNKPEASSSDKPDNKPEASSSDK--PDNKPEASSSD 141
Score = 23.9 bits (50), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 29 KIEGLAKEKPEEKPEVTKEGKRESEEKDELIPEEKPEGKDEDSNT 73
K E + +KP+ KPE + K + K E +KP+ K E S+T
Sbjct: 122 KPEASSSDKPDNKPEASSSDKP--DNKPEASSSDKPDNKPEASST 164
Score = 22.3 bits (46), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 29 KIEGLAKEKPEEKPEVTKEGKRE--SEEKDELIPEEKPEG 66
K E + +KP+ KPE + K E S K E KPE
Sbjct: 146 KPEASSSDKPDNKPEASSTNKPEASSTNKPEASSTNKPEA 185
>M.Javanica_Scaff2574g023851 on XP_807740 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 681
Score = 23.5 bits (49), Expect = 3.2, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 51 ESEEKDELIP--EEKPEGKDEDSNTKIKENPQGKAKRGEDTIASIREKRG 98
++ EK+ELI E+K +G+ E S + + KR +D +A+ +E G
Sbjct: 431 DNNEKEELIALYEKKKDGEKETSPGMVSVLLTAQLKRVKDVLATWKEVDG 480
>M.Javanica_Scaff2574g023851 on XP_818963 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1055
Score = 23.5 bits (49), Expect = 3.8, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 21/55 (38%)
Query: 51 ESEEKDELIPEEKPEGKDEDSNTKIKENPQGKAKRGEDTIASIREKRGESCDEEG 105
+ E + P E E DS+ + +E P K+ D S + EEG
Sbjct: 814 QGETSQQTTPHEAKESMQRDSDVQPRELPSTKSTEVADVEGSAESNDTQQPVEEG 868
>M.Javanica_Scaff2574g023851 on XP_652394 Igl2 (Adhesin) [Entamoeba histolytica]
Length = 1105
Score = 23.5 bits (49), Expect = 3.8, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 69 EDSNTKIKENPQGKAKRGEDTIASIREKRGESCDE 103
++S+T N + K K G DT S K + C E
Sbjct: 93 KESDTSSSNNEKCKCKNGVDTCESCLSKDNDKCGE 127
>M.Javanica_Scaff2574g023851 on XP_815511 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 848
Score = 23.5 bits (49), Expect = 4.0, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 26 EGSKIEGLAKEKPEEKPEVTKEGKRESEEKD--ELIPEEKP 64
EG +I L KP E PE +R +E + ++ E KP
Sbjct: 763 EGEQIVALPATKPSEAPEEQAALRRPRKESEAQQITTEGKP 803
>M.Javanica_Scaff2574g023851 on XP_804892 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1046
Score = 23.1 bits (48), Expect = 4.4, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 52 SEEKDELIPEEKPEGKDEDSNTKIKENPQGKAKRGEDTIAS 92
+EE E E P+ K + ++E P G+A +D++AS
Sbjct: 696 NEELSEDDLNELPDSKVTIPSLGVEEQPTGQAASTDDSVAS 736
>M.Javanica_Scaff2574g023851 on XP_828098 VSG (Establishment) [Trypanosoma brucei]
Length = 474
Score = 22.7 bits (47), Expect = 6.1, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Query: 10 IQFSIGFALLIPPKEEEGSKIEGLAKEK---PEEKPEVTKEGKRESEEKDELIPEEKPEG 66
+Q + ALL+ EE + A + P + E + R ++ + E+K E
Sbjct: 352 LQQAQTLALLVEALSEEAKSVYTAAAQNRLVPPAEAEHQADASRHRDQTQGITGEKKQEI 411
Query: 67 KDEDSNTKIKENPQGKAK 84
++ N K K N + K
Sbjct: 412 TCQEENNKDKSNSKAGCK 429
>M.Javanica_Scaff2574g023851 on XP_001608670 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1320
Score = 22.7 bits (47), Expect = 7.0, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 24/52 (46%)
Query: 47 EGKRESEEKDELIPEEKPEGKDEDSNTKIKENPQGKAKRGEDTIASIREKRG 98
EGK + K + E+ +GK E TK+K+ GK + + + + G
Sbjct: 710 EGKDKEGIKGVIKKLEEAKGKLETELTKVKDRLNGKLQEATKKLGELTKGSG 761
>M.Javanica_Scaff2574g023851 on XP_809283 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 844
Score = 22.3 bits (46), Expect = 7.8, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 26 EGSKIEGLAKEKPEEKPEVTKEGKRESEEKD--ELIPEEKP 64
EG +I L KP E PE +R +E + ++ E KP
Sbjct: 760 EGEQIVDLPATKPSEAPEEQAALRRPRKESEAQQITTEGKP 800
>M.Javanica_Scaff2574g023851 on XP_001609449 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 776
Score = 22.3 bits (46), Expect = 8.0, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 47 EGKRESEEKDELIPEEKPEGKDEDSNTKIKENPQGKAKRGE 87
E K+ E + K + KD+ ++T K P K +RGE
Sbjct: 520 EKKKCPEHAKDRNKRCKLDEKDKTADTAAKTQPDPKLQRGE 560
>M.Javanica_Scaff2574g023851 on XP_818689 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 844
Score = 22.3 bits (46), Expect = 9.3, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 26 EGSKIEGLAKEKPEEKPEVTKEGKRESEEKD 56
EG I L KP E PE + +R +E +
Sbjct: 759 EGEHIVALPATKPSEAPEEKTDLQRSRKESE 789
>M.Javanica_Scaff2574g023851 on XP_827749 VSG (Establishment) [Trypanosoma brucei]
Length = 516
Score = 22.3 bits (46), Expect = 9.4, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 50 RESEEKDELIPEEKPEGKDED 70
++ EEKD+ I EEK GK ++
Sbjct: 447 KQVEEKDDGIKEEKCAGKQQE 467
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2662g024413
(180 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_845135 VSG (Establishment) [Trypanosoma brucei] 27 0.48
XP_808182 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 7.2
>M.Javanica_Scaff2662g024413 on XP_845135 VSG (Establishment) [Trypanosoma brucei]
Length = 474
Score = 27.3 bits (59), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 12/45 (26%), Positives = 20/45 (44%)
Query: 86 LQVENQPKCVAQNDGNPVECQIQGDKLSGKLIYDIENGPSVNVPF 130
L +E C +G P + DKL K+ + ++GP+ P
Sbjct: 189 LAIELDQACYKNTEGTPCDANDGSDKLKTKIKFGTKHGPAGTSPL 233
>M.Javanica_Scaff2662g024413 on XP_808182 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 918
Score = 23.9 bits (50), Expect = 7.2, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 5/81 (6%)
Query: 47 VPVAGSKMHGDAKSAM--KPNNPSLSNKLIVSGG--NSKYSVTLQVENQPKCVAQ-NDGN 101
+PV G KM+GD K+ + + KL+ GG SV L E + V +G
Sbjct: 595 IPVMGVKMNGDEKTVLFGLSHENGGKWKLLCGGGTDTEDQSVNLATETKNHVVILIRNGT 654
Query: 102 PVECQIQGDKLSGKLIYDIEN 122
+ G + G +D+++
Sbjct: 655 QGSAYVDGKSVGGNAQFDLKD 675
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff564g007641
(127 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_821910 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.92
XP_821902 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.92
XP_807802 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.0
XP_813429 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.0
XP_001609449 variant erythrocyte surface antigen-1, beta subuni... 24 2.7
>M.Javanica_Scaff564g007641 on XP_821910 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 853
Score = 25.8 bits (55), Expect = 0.92, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 15 PALPLKTMTEQPSPPQIIPLKAVMEQPS 42
PA P + +PP IP +A +EQ +
Sbjct: 751 PASPFVARNQNAAPPATIPPEAPVEQTT 778
>M.Javanica_Scaff564g007641 on XP_821902 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 854
Score = 25.8 bits (55), Expect = 0.92, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 15 PALPLKTMTEQPSPPQIIPLKAVMEQPS 42
PA P + +PP IP +A +EQ +
Sbjct: 751 PASPFVARNQNAAPPATIPPEAPVEQTT 778
>M.Javanica_Scaff564g007641 on XP_807802 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 805
Score = 24.6 bits (52), Expect = 2.0, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
Query: 2 SQIIPEFNP---SIPPPALPLKTMTEQPSPP 29
S+ I NP SIPPP L T PS P
Sbjct: 692 SEEIDALNPNKASIPPPVNTLVQGTVSPSTP 722
>M.Javanica_Scaff564g007641 on XP_813429 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 818
Score = 24.6 bits (52), Expect = 2.0, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
Query: 2 SQIIPEFNP---SIPPPALPLKTMTEQPSPP 29
S+ I NP SIPPP L T PS P
Sbjct: 705 SEEIDALNPNKASIPPPVNTLVQGTVSPSTP 735
>M.Javanica_Scaff564g007641 on XP_001609449 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 776
Score = 24.3 bits (51), Expect = 2.7, Method: Composition-based stats.
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 57 PPTAFPEKLLW 67
PP++FPE LW
Sbjct: 206 PPSSFPENYLW 216
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2578g023884
(222 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001611900 variant erythrocyte surface antigen-1, alpha subun... 27 1.6
XP_827749 VSG (Establishment) [Trypanosoma brucei] 26 1.9
XP_001351561 PfEMP1 (Establishment) [Plasmodium falciparum] 24 7.6
XP_001348946 PfEMP1 (Establishment) [Plasmodium falciparum] 24 7.6
XP_001350415 PfEMP1 (Establishment) [Plasmodium falciparum] 24 9.9
>M.Javanica_Scaff2578g023884 on XP_001611900 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1226
Score = 26.6 bits (57), Expect = 1.6, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Query: 92 KNKNKIEKTLKKINWYKTELTAEEFESINKKGDENYEMLDKLNFGVLLKIRGICSNLSYY 151
K+K IEK + + K L +E E KKG + + LD + G L GI L
Sbjct: 712 KDKGVIEKVKRALGTAKNGLDGKELEEAVKKGLDGMDGLD-VKLGELTNGGGILGELDGK 770
Query: 152 FKQLNGN 158
N N
Sbjct: 771 LGAANSN 777
>M.Javanica_Scaff2578g023884 on XP_827749 VSG (Establishment) [Trypanosoma brucei]
Length = 516
Score = 26.2 bits (56), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 20/40 (50%)
Query: 19 ILLVKSKASEEESESLLQSFRNEHGQNETEEEHTEKRTGD 58
ILL SK S+ E + R E Q ET+E +K T D
Sbjct: 382 ILLYLSKVSQNNREQACTAVRQEQKQQETDETCEKKGTED 421
>M.Javanica_Scaff2578g023884 on XP_001351561 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3553
Score = 24.3 bits (51), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 17/22 (77%)
Query: 81 EFIKEKINFFFKNKNKIEKTLK 102
EF+K + +FF++ N+I+K LK
Sbjct: 2845 EFVKRWLEYFFEDYNRIQKKLK 2866
>M.Javanica_Scaff2578g023884 on XP_001348946 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3553
Score = 24.3 bits (51), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 17/22 (77%)
Query: 81 EFIKEKINFFFKNKNKIEKTLK 102
EF+K + +FF++ N+I+K LK
Sbjct: 2845 EFVKRWLEYFFEDYNRIQKKLK 2866
>M.Javanica_Scaff2578g023884 on XP_001350415 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3056
Score = 23.9 bits (50), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 82 FIKEKINFFFK--NKNKIEKTLKKINWYKTELTA 113
+I K+N F NKN IE + +W++ E A
Sbjct: 1697 YIDSKLNEIFDSSNKNDIETKRARTDWWENEAIA 1730
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff26787g092843
(212 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351435 PfEMP1 (Establishment) [Plasmodium falciparum] 24 7.1
>M.Javanica_Scaff26787g092843 on XP_001351435 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2209
Score = 24.3 bits (51), Expect = 7.1, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 100 NSYKLEDTKNISTTIMKTKNNLLHNNSTNKLIPSTLLPQSSSHRPTRQVFGPGTNNLRVR 159
N+ K E N+ + T+ N+LH+N P+TL +P + NL +R
Sbjct: 1889 NTLKDEFISNMLQSTQNTEPNILHDNMHYNTHPNTLYFDKHEEKPFIMLI--QDRNLLIR 1946
Query: 160 TKDQYRIVYN 169
+ Y + N
Sbjct: 1947 EEYSYNMSTN 1956
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff8349g051630
(66 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7652g048929
(61 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6409g043798
(55 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
O00834 MIC1 (Adhesin) [Toxoplasma gondii] 24 0.52
XP_001219221 VSG (Establishment) [Trypanosoma brucei] 22 2.1
>M.Javanica_Scaff6409g043798 on O00834 MIC1 (Adhesin) [Toxoplasma gondii]
Length = 255
Score = 23.9 bits (50), Expect = 0.52, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 37 AWCATLGRESTYCPGGYRG 55
A CA+ + YCPGG RG
Sbjct: 191 AECASNCGTTWYCPGGRRG 209
>M.Javanica_Scaff6409g043798 on XP_001219221 VSG (Establishment) [Trypanosoma brucei]
Length = 537
Score = 22.3 bits (46), Expect = 2.1, Method: Composition-based stats.
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 36 TAWCATLGRESTYC 49
+AWCA G + T C
Sbjct: 466 SAWCAKHGTDETAC 479
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff27297g093556
(118 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_816532 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.077
XP_819563 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.082
XP_804567 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.10
XP_812546 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.19
XP_821769 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.19
XP_810808 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.80
XP_806844 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.2
XP_803124 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.3
XP_804448 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.3
XP_811687 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.3
XP_807449 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.1
XP_806132 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.2
ABA06464 MSA-2c (Invasion) [Babesia bovis] 23 7.2
>M.Javanica_Scaff27297g093556 on XP_816532 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 725
Score = 28.5 bits (62), Expect = 0.077, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 10/42 (23%)
Query: 73 ELGLLLQ------YLDSKRNAPLLDENVAQLVGESPLGTMRF 108
++ L+LQ Y+D K LL E L GE+PLG +RF
Sbjct: 620 QVALMLQGNKASVYIDGK----LLGEEETMLTGETPLGLVRF 657
>M.Javanica_Scaff27297g093556 on XP_819563 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 720
Score = 28.5 bits (62), Expect = 0.082, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 10/42 (23%)
Query: 73 ELGLLLQ------YLDSKRNAPLLDENVAQLVGESPLGTMRF 108
++ L+LQ Y+D K LL E L GE+PLG +RF
Sbjct: 622 QVALMLQGNKASVYIDGK----LLGEEETMLTGETPLGLVRF 659
>M.Javanica_Scaff27297g093556 on XP_804567 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 704
Score = 28.5 bits (62), Expect = 0.10, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 11/47 (23%)
Query: 69 PHNE-ELGLLLQ------YLDSKRNAPLLDENVAQLVGESPLGTMRF 108
P E ++ L+LQ Y+D K LL E V QL GE+PL + F
Sbjct: 599 PKKEHQVALMLQGNKASVYIDGK----LLGEEVTQLTGETPLEYVHF 641
>M.Javanica_Scaff27297g093556 on XP_812546 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 730
Score = 27.7 bits (60), Expect = 0.19, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 15/64 (23%)
Query: 52 FQQQRWISVRPFQDYPRPHNE-ELGLLLQ------YLDSKRNAPLLDENVAQLVGESPLG 104
F+ + RP++ P E ++ L+LQ Y+D K LL E L GE+PLG
Sbjct: 606 FEDKITTESRPWE----PKKEYQVVLMLQGNKASVYVDGK----LLGEEETMLTGETPLG 657
Query: 105 TMRF 108
+RF
Sbjct: 658 LVRF 661
>M.Javanica_Scaff27297g093556 on XP_821769 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 730
Score = 27.7 bits (60), Expect = 0.19, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 15/64 (23%)
Query: 52 FQQQRWISVRPFQDYPRPHNE-ELGLLLQ------YLDSKRNAPLLDENVAQLVGESPLG 104
F+ + RP++ P E ++ L+LQ Y+D K LL E L GE+PLG
Sbjct: 606 FEDKITTESRPWE----PKKEYQVVLMLQGNKASVYVDGK----LLGEEETMLTGETPLG 657
Query: 105 TMRF 108
+RF
Sbjct: 658 LVRF 661
>M.Javanica_Scaff27297g093556 on XP_810808 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 735
Score = 25.8 bits (55), Expect = 0.80, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 15/55 (27%)
Query: 61 RPFQDYPRPHNE-ELGLLLQ------YLDSKRNAPLLDENVAQLVGESPLGTMRF 108
RP++ P E ++ L+LQ Y+D + LL E A L GE+PL +RF
Sbjct: 615 RPWE----PKKEHQVALMLQGNKASVYIDGE----LLGEEEAPLTGEAPLELVRF 661
>M.Javanica_Scaff27297g093556 on XP_806844 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 740
Score = 25.4 bits (54), Expect = 1.2, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 11/47 (23%)
Query: 69 PHNE-ELGLLLQ------YLDSKRNAPLLDENVAQLVGESPLGTMRF 108
P E ++ L+LQ Y+D K LL E L GE+PL +RF
Sbjct: 618 PKKEYQVALMLQGNKASVYVDGK----LLGEEETMLTGETPLELVRF 660
>M.Javanica_Scaff27297g093556 on XP_803124 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 620
Score = 25.0 bits (53), Expect = 1.3, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 10/42 (23%)
Query: 73 ELGLLLQ------YLDSKRNAPLLDENVAQLVGESPLGTMRF 108
++ L+LQ Y+D K L E+ A L GE+PL T+ F
Sbjct: 446 QVALMLQGKKASVYIDGKS----LGEDEALLTGEAPLETLEF 483
>M.Javanica_Scaff27297g093556 on XP_804448 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 748
Score = 25.0 bits (53), Expect = 1.3, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 10/42 (23%)
Query: 73 ELGLLLQ------YLDSKRNAPLLDENVAQLVGESPLGTMRF 108
++ L+LQ Y+D K LL E L GE+PL +RF
Sbjct: 621 QVALMLQGKKASVYIDGK----LLGEEEVPLTGEAPLELVRF 658
>M.Javanica_Scaff27297g093556 on XP_811687 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 722
Score = 24.3 bits (51), Expect = 2.3, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 19/54 (35%)
Query: 56 RWISVRPFQDYPRPHNEELGLLLQ------YLDSKRNAPLLDENVAQLVGESPL 103
RW P ++Y ++ L+LQ Y+D K LL E V L GE+PL
Sbjct: 615 RW---EPKKEY------QVALMLQGKKASVYIDGK----LLGEEVTLLTGETPL 655
>M.Javanica_Scaff27297g093556 on XP_807449 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 700
Score = 23.9 bits (50), Expect = 3.1, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 10/42 (23%)
Query: 73 ELGLLLQ------YLDSKRNAPLLDENVAQLVGESPLGTMRF 108
++ L+LQ Y+D K LL + L GE+PL +RF
Sbjct: 572 QVALMLQGKKASVYIDGK----LLGQEEVPLTGEAPLELVRF 609
>M.Javanica_Scaff27297g093556 on XP_806132 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 754
Score = 23.9 bits (50), Expect = 3.2, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 10/42 (23%)
Query: 73 ELGLLLQ------YLDSKRNAPLLDENVAQLVGESPLGTMRF 108
++ L+LQ Y+D K LL + L GE+PL +RF
Sbjct: 626 QVALMLQGKKASVYIDGK----LLGQEEVPLTGEAPLELVRF 663
>M.Javanica_Scaff27297g093556 on ABA06464 MSA-2c (Invasion) [Babesia bovis]
Length = 265
Score = 22.7 bits (47), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 13 FVLIAASF--VISNCSPAIPRQETIPSLLPNGA 43
F +I +F ++ N + A P++E +P+ NG+
Sbjct: 4 FYIITVAFCSILFNYAVASPQEEAVPTKQVNGS 36
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff461g006535
(163 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_807433 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.47
XP_815234 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.49
XP_812850 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.49
BAF74654 gp82 (Adhesin) [Trypanosoma cruzi] 24 2.2
BAF74655 gp82 (Adhesin) [Trypanosoma cruzi] 24 2.2
BAF74641 gp82 (Adhesin) [Trypanosoma cruzi] 23 2.4
BAF74642 gp82 (Adhesin) [Trypanosoma cruzi] 23 2.4
BAF74646 gp82 (Adhesin) [Trypanosoma cruzi] 23 2.4
BAF74647 gp82 (Adhesin) [Trypanosoma cruzi] 23 2.4
BAF74649 gp82 (Adhesin) [Trypanosoma cruzi] 23 2.6
XP_803651 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.4
BAF74650 gp82 (Adhesin) [Trypanosoma cruzi] 23 4.4
BAF74651 gp82 (Adhesin) [Trypanosoma cruzi] 23 4.4
XP_811916 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.6
XP_804086 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.2
BAF74648 gp82 (Adhesin) [Trypanosoma cruzi] 23 5.8
XP_812154 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.8
XP_001351319 PfEMP1 (Establishment) [Plasmodium falciparum] 23 8.2
>M.Javanica_Scaff461g006535 on XP_807433 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1042
Score = 27.3 bits (59), Expect = 0.47, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 58 AKQNFQFGQILSKTTTKTPKNSSKNHRKNKKPK 90
A QN GQ K TT +P+N + K+K K
Sbjct: 752 APQNSHLGQASEKDTTPSPQNQGLSPEKSKNEK 784
>M.Javanica_Scaff461g006535 on XP_815234 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1032
Score = 27.3 bits (59), Expect = 0.49, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 58 AKQNFQFGQILSKTTTKTPKNSSKNHRKNKKPK 90
A QN GQ K TT +P+N + K+K K
Sbjct: 749 APQNRHLGQASEKDTTPSPQNQGLSPEKSKNEK 781
>M.Javanica_Scaff461g006535 on XP_812850 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1032
Score = 27.3 bits (59), Expect = 0.49, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 58 AKQNFQFGQILSKTTTKTPKNSSKNHRKNKKPK 90
A QN GQ K TT +P+N + K+K K
Sbjct: 749 APQNRHLGQASEKDTTPSPQNQGLSPEKSKNEK 781
>M.Javanica_Scaff461g006535 on BAF74654 gp82 (Adhesin) [Trypanosoma cruzi]
Length = 70
Score = 23.9 bits (50), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 68 LSKTTTKTPKNSSKNHRKNKKPKILMK 94
LS+TT KTPK KN + +LM
Sbjct: 43 LSQTTLKTPKAGMKNFASSGGSGVLMD 69
>M.Javanica_Scaff461g006535 on BAF74655 gp82 (Adhesin) [Trypanosoma cruzi]
Length = 70
Score = 23.9 bits (50), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 68 LSKTTTKTPKNSSKNHRKNKKPKILMK 94
LS+TT KTPK KN + +LM
Sbjct: 43 LSQTTLKTPKAGMKNFASSGGSGVLMD 69
>M.Javanica_Scaff461g006535 on BAF74641 gp82 (Adhesin) [Trypanosoma cruzi]
Length = 70
Score = 23.5 bits (49), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 68 LSKTTTKTPKNSSKNHRKNKKPKILMK 94
LS+TT KTPK KN + +LM+
Sbjct: 43 LSQTTLKTPKAGLKNFASSGGSGVLME 69
>M.Javanica_Scaff461g006535 on BAF74642 gp82 (Adhesin) [Trypanosoma cruzi]
Length = 70
Score = 23.5 bits (49), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 68 LSKTTTKTPKNSSKNHRKNKKPKILMK 94
LS+TT KTPK KN + +LM+
Sbjct: 43 LSQTTLKTPKAGLKNFASSGGSGVLME 69
>M.Javanica_Scaff461g006535 on BAF74646 gp82 (Adhesin) [Trypanosoma cruzi]
Length = 70
Score = 23.5 bits (49), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 68 LSKTTTKTPKNSSKNHRKNKKPKILMK 94
LS+TT KTPK KN + +LM+
Sbjct: 43 LSQTTLKTPKAGLKNFASSGGSGVLME 69
>M.Javanica_Scaff461g006535 on BAF74647 gp82 (Adhesin) [Trypanosoma cruzi]
Length = 70
Score = 23.5 bits (49), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 68 LSKTTTKTPKNSSKNHRKNKKPKILMK 94
LS+TT KTPK KN + +LM+
Sbjct: 43 LSQTTLKTPKAGLKNFASSGGSGVLME 69
>M.Javanica_Scaff461g006535 on BAF74649 gp82 (Adhesin) [Trypanosoma cruzi]
Length = 70
Score = 23.5 bits (49), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 68 LSKTTTKTPKNSSKNHRKNKKPKILMK 94
LS+TT KTPK KN + +LM+
Sbjct: 43 LSQTTLKTPKAGLKNFASSGGSGVLME 69
>M.Javanica_Scaff461g006535 on XP_803651 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 238
Score = 24.3 bits (51), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 66 QILSKTTTKTPKNSSKNHRKN 86
QIL+K TTK P+ K+ +K+
Sbjct: 125 QILTKKTTKEPEEVLKDAKKD 145
>M.Javanica_Scaff461g006535 on BAF74650 gp82 (Adhesin) [Trypanosoma cruzi]
Length = 70
Score = 23.1 bits (48), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 68 LSKTTTKTPKNSSKNHRKNKKPKILMK 94
LS+TT KTPK K+ + ILM+
Sbjct: 43 LSQTTLKTPKAGLKDFASSGGSGILME 69
>M.Javanica_Scaff461g006535 on BAF74651 gp82 (Adhesin) [Trypanosoma cruzi]
Length = 70
Score = 23.1 bits (48), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 68 LSKTTTKTPKNSSKNHRKNKKPKILMK 94
LS+TT KTPK K+ + ILM+
Sbjct: 43 LSQTTLKTPKAGLKDFASSGGSGILME 69
>M.Javanica_Scaff461g006535 on XP_811916 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 685
Score = 24.3 bits (51), Expect = 4.6, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 67 ILSKTTTKTPKNSSKNHRKNKKPKILMKSKGLLL 100
+LS+TT KTPK K+ + +LM+ L+
Sbjct: 213 LLSQTTLKTPKAGLKDFASSGGSGVLMEDGTLVF 246
>M.Javanica_Scaff461g006535 on XP_804086 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 742
Score = 24.3 bits (51), Expect = 5.2, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 58 AKQNFQFGQILSKTTTKTPKNSSKNHRKNKKPK 90
A QN GQ K TT + +N + K+K K
Sbjct: 452 APQNSHLGQASEKDTTPSTQNQGLSPEKSKNEK 484
>M.Javanica_Scaff461g006535 on BAF74648 gp82 (Adhesin) [Trypanosoma cruzi]
Length = 70
Score = 22.7 bits (47), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 68 LSKTTTKTPKNSSKNHRKNKKPKILMK 94
LS+TT KTPK K+ + ILM+
Sbjct: 43 LSQTTLKTPKAGLKDFASSGGSGILME 69
>M.Javanica_Scaff461g006535 on XP_812154 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 175
Score = 23.5 bits (49), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 66 QILSKTTTKTPKNSSKNHRKN 86
QIL+K TTK P+ K+ +K+
Sbjct: 125 QILTKKTTKEPEEVLKDAKKD 145
>M.Javanica_Scaff461g006535 on XP_001351319 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2646
Score = 23.5 bits (49), Expect = 8.2, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 51 SKTQNFMAKQNFQFGQILSKTTTKTPKNSS 80
SKT N +AK + G+ SK +K+P ++
Sbjct: 992 SKTVNDVAKAKDKIGKFFSKDGSKSPSGTT 1021
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff29467g096373
(59 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAW78130 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAW78132 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAW78133 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAW78146 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAW78147 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAW78148 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAW78159 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAW78164 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAW78165 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAW78168 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAW78174 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAW78177 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAW78138 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAW78144 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAW78149 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAW78152 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAW78154 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAW78135 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAW78137 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAW78141 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAW78151 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAW78153 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAW78166 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAW78172 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAW78173 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAW78176 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAW78134 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAW78169 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAW78171 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAW78161 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAW78131 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAW78157 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAW78160 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAQ11891 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAQ11894 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAQ11895 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAA29770 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAA29771 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAA29774 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAA29776 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAA29777 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAA29778 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAW78163 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAA29772 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAA29773 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAA29775 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAW78167 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAW78156 TRAP (Invasion) [Plasmodium falciparum] 24 0.45
AAQ11892 TRAP (Invasion) [Plasmodium falciparum] 24 0.54
AAW78136 TRAP (Invasion) [Plasmodium falciparum] 24 0.63
AAW78158 TRAP (Invasion) [Plasmodium falciparum] 24 0.63
AAW78162 TRAP (Invasion) [Plasmodium falciparum] 24 0.63
AAW78175 TRAP (Invasion) [Plasmodium falciparum] 24 0.63
AAW78139 TRAP (Invasion) [Plasmodium falciparum] 24 0.63
AAW78150 TRAP (Invasion) [Plasmodium falciparum] 24 0.63
XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum] 23 1.4
XP_651378 Lgl4 (Adhesin) [Entamoeba histolytica] 22 2.3
XP_001609315 variant erythrocyte surface antigen-1, alpha subun... 22 3.3
>M.Javanica_Scaff29467g096373 on AAW78130 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAW78132 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAW78133 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAW78146 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAW78147 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAW78148 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAW78159 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAW78164 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAW78165 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAW78168 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAW78174 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAW78177 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAW78138 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAW78144 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAW78149 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAW78152 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAW78154 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAW78135 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAW78137 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAW78141 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAW78151 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAW78153 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAW78166 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAW78172 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAW78173 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAW78176 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAW78134 TRAP (Invasion) [Plasmodium falciparum]
Length = 551
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAW78169 TRAP (Invasion) [Plasmodium falciparum]
Length = 551
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAW78171 TRAP (Invasion) [Plasmodium falciparum]
Length = 551
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAW78161 TRAP (Invasion) [Plasmodium falciparum]
Length = 554
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAW78131 TRAP (Invasion) [Plasmodium falciparum]
Length = 557
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAW78157 TRAP (Invasion) [Plasmodium falciparum]
Length = 557
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAW78160 TRAP (Invasion) [Plasmodium falciparum]
Length = 557
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAQ11891 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAQ11894 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAQ11895 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAA29770 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAA29771 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAA29774 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAA29776 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAA29777 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAA29778 TRAP (Invasion) [Plasmodium falciparum]
Length = 562
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAW78163 TRAP (Invasion) [Plasmodium falciparum]
Length = 565
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAA29772 TRAP (Invasion) [Plasmodium falciparum]
Length = 565
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAA29773 TRAP (Invasion) [Plasmodium falciparum]
Length = 568
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAA29775 TRAP (Invasion) [Plasmodium falciparum]
Length = 574
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAW78167 TRAP (Invasion) [Plasmodium falciparum]
Length = 575
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAW78156 TRAP (Invasion) [Plasmodium falciparum]
Length = 581
Score = 24.3 bits (51), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E +++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYR 39
>M.Javanica_Scaff29467g096373 on AAQ11892 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 24.3 bits (51), Expect = 0.54, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRFQ 39
N+K+ + + LIF+ +F L+N + I E ++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKYH 39
>M.Javanica_Scaff29467g096373 on AAW78136 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 23.9 bits (50), Expect = 0.63, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 4 NLKFFIFLILIFYIIFVNLINAAPINKGIRKEPRF 38
N+K+ + + LIF+ +F L+N + I E ++
Sbjct: 6 NVKYLVIVFLIFFDLF--LVNGRDVQNNIVDEIKY 38
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff354g005260
(108 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAB72264 Toxofilin (Establishment) [Toxoplasma gondii] 25 0.80
XP_813642 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.1
>M.Javanica_Scaff354g005260 on CAB72264 Toxofilin (Establishment) [Toxoplasma gondii]
Length = 245
Score = 25.4 bits (54), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 62 SPRPSRSLYDAGAEGSSVLRSQRGILQQE 90
SP P R +++G EG+S + QQE
Sbjct: 43 SPSPKRGRFESGDEGTSTMSPSVAARQQE 71
>M.Javanica_Scaff354g005260 on XP_813642 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 872
Score = 23.9 bits (50), Expect = 3.1, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 51 KPHQLSETLLFSPR--PSRSLYDAGAEGSSVLRSQRGILQQEQ 91
+P +E F+P P+ SL D EG ++ S G +EQ
Sbjct: 706 RPWDEAEIAAFNPNKDPAPSLVDGSVEGDAIRPSGGGQEMEEQ 748
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5013g037400
(162 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001347690 PfEMP1 (Establishment) [Plasmodium falciparum] 25 2.7
ABA06453 MSA-2c (Invasion) [Babesia bovis] 24 5.1
ABA06458 MSA-2c (Invasion) [Babesia bovis] 23 7.5
ABA06471 MSA-2a1 (Invasion) [Babesia bovis] 23 7.5
>M.Javanica_Scaff5013g037400 on XP_001347690 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 25.0 bits (53), Expect = 2.7, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 14/82 (17%)
Query: 63 SFSVWISSDGGKTLKQEIRSFRFCFFNNIQLA-LRAETSQRFIKNIFERNF----PKDYV 117
+F WI K KQE + + I+ A ETS R I NI+E++F Y
Sbjct: 372 NFVPWI-----KNQKQEFDKQKNKYAEEIKKAKADEETSSRNINNIYEKDFYERLKTHYG 426
Query: 118 SFFKLLLRLMKE----DYPQLR 135
S + L +L +E D P+++
Sbjct: 427 SVNEFLKKLNEERICKDEPKVK 448
>M.Javanica_Scaff5013g037400 on ABA06453 MSA-2c (Invasion) [Babesia bovis]
Length = 265
Score = 23.9 bits (50), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 25/54 (46%)
Query: 88 FNNIQLALRAETSQRFIKNIFERNFPKDYVSFFKLLLRLMKEDYPQLRAIDVEM 141
FN I +AL + + + E+N P + LL MK Y +R+ID M
Sbjct: 4 FNIITVALCSTLLNSTLASPQEKNVPSKHAYGSHLLFDDMKMFYDVMRSIDESM 57
>M.Javanica_Scaff5013g037400 on ABA06458 MSA-2c (Invasion) [Babesia bovis]
Length = 265
Score = 23.5 bits (49), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 25/54 (46%)
Query: 88 FNNIQLALRAETSQRFIKNIFERNFPKDYVSFFKLLLRLMKEDYPQLRAIDVEM 141
FN I +AL + + + E+N P + LL MK Y +R+ID M
Sbjct: 4 FNIITVALCSTLFNTTLASPQEKNVPSKHAYGSHLLFDDMKLFYDVMRSIDESM 57
>M.Javanica_Scaff5013g037400 on ABA06471 MSA-2a1 (Invasion) [Babesia bovis]
Length = 265
Score = 23.5 bits (49), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 25/54 (46%)
Query: 88 FNNIQLALRAETSQRFIKNIFERNFPKDYVSFFKLLLRLMKEDYPQLRAIDVEM 141
FN I +AL + + + E+N P + LL MK Y +R+ID M
Sbjct: 4 FNIITVALCSTLFNTTLASPQEKNVPSKHAYGSHLLFDDMKLFYDVMRSIDESM 57
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3412g029003
(67 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7570g048618
(396 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAX77225 Falcipain 2' (Cysteine protease) [Plasmodium falcipa... 27 2.7
XP_001347833 Falcipain 3 (Cysteine protease) [Plasmodium falc... 27 2.8
>M.Javanica_Scaff7570g048618 on AAX77225 Falcipain 2' (Cysteine protease) [Plasmodium
falciparum]
Length = 484
Score = 26.6 bits (57), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 319 MSCAPETCTSLPCIDDTGINNYMNRPD--VRKALHI 352
+S AP C C + GI NY++ PD +++AL
Sbjct: 350 VSDAPNLCNIDRCTEKYGIKNYLSVPDNKLKEALRF 385
>M.Javanica_Scaff7570g048618 on XP_001347833 Falcipain 3 (Cysteine protease) [Plasmodium
falciparum]
Length = 482
Score = 26.6 bits (57), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Query: 319 MSCAPETCTSLPCIDDTGINNYMNRPD--VRKAL 350
+S AP C C + GI NY++ PD +++AL
Sbjct: 348 VSDAPNLCNIDRCTEKYGIKNYLSVPDNKLKEAL 381
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff692g008963
(166 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_818190 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.15
XP_812950 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.63
XP_806431 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.94
XP_001349738 PfEMP1 (Establishment) [Plasmodium falciparum] 24 4.5
XP_822017 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.6
>M.Javanica_Scaff692g008963 on XP_818190 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 807
Score = 28.9 bits (63), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 97 IHECSNCKSGFNCRKHRDNKDISSSSTRVHTGR 129
+ +CS+ K G C+ + KD S S TRVH GR
Sbjct: 149 LQKCSSDKEG-KCQSQSEKKDDSRSRTRVHLGR 180
>M.Javanica_Scaff692g008963 on XP_812950 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 815
Score = 26.9 bits (58), Expect = 0.63, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Query: 81 SKGKAPHIRSRSEIVDIHECSNCKSGFNCRKHRDNKDISSSSTRVHTGRDKVPPYKVGSG 140
SKG+ + ++++++ EC + K NC H + +D S S T+V R P V G
Sbjct: 135 SKGELDATKLKTQVLE--ECPSDKK--NCASHSEAQDASQSWTKVRVSR----PTTVVQG 186
Query: 141 SHV 143
S +
Sbjct: 187 SDI 189
>M.Javanica_Scaff692g008963 on XP_806431 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 872
Score = 26.6 bits (57), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Query: 78 HRPSKGKAPHIRSRSEIVDIHECSNCKSGFNCRKHRDNKDISSSSTRVHTGRDKVPPYKV 137
+ SKG+ + ++++++ EC + K NC H + +D S S T+V R P V
Sbjct: 182 YEESKGELDATKLKTQVLE--ECPSDKK--NCASHSEAQDASQSWTKVRVSR----PTTV 233
Query: 138 GSGSHVVKM 146
GS + +
Sbjct: 234 VKGSDIYML 242
>M.Javanica_Scaff692g008963 on XP_001349738 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2162
Score = 24.3 bits (51), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 29 ATPTSSEIREKDKRMEKLWIVDETSPNAHDEITEMGPPEQHEGTSGKHRHR 79
AT T +++K KR+ L+ V + +D T++ P TSGK+R +
Sbjct: 1717 ATFTYFYLKKKTKRLVDLFSVINIPKSDYDIPTKLSPNRYIPYTSGKYRGK 1767
>M.Javanica_Scaff692g008963 on XP_822017 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 990
Score = 23.9 bits (50), Expect = 5.6, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 6/40 (15%)
Query: 31 PTSSEIREKDKRMEKLWIVDETSPNAHDEITEMGPPEQHE 70
P SE EK+K + LW+ D T I ++GP + +
Sbjct: 482 PVYSENGEKEKGVLHLWVTDNT------HIFDIGPVSEED 515
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff25981g091715
(66 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Q27895 NTPase2 (Establishment) [Toxoplasma gondii] 25 0.47
Q27893 NTPase1 (Establishment) [Toxoplasma gondii] 24 0.66
XP_820143 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.6
>M.Javanica_Scaff25981g091715 on Q27895 NTPase2 (Establishment) [Toxoplasma gondii]
Length = 255
Score = 24.6 bits (52), Expect = 0.47, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 20/26 (76%)
Query: 17 TLFLLISKLNAQQKQQLRSVPIPLHM 42
T+ +L S+LN +QK Q++++ IP+ +
Sbjct: 160 TVAILDSQLNEEQKVQVKALGIPVML 185
>M.Javanica_Scaff25981g091715 on Q27893 NTPase1 (Establishment) [Toxoplasma gondii]
Length = 255
Score = 24.3 bits (51), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 20/26 (76%)
Query: 17 TLFLLISKLNAQQKQQLRSVPIPLHM 42
T+ +L S+LN +QK Q++++ IP+ +
Sbjct: 160 TVAILDSQLNEKQKVQVKALGIPVML 185
>M.Javanica_Scaff25981g091715 on XP_820143 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 869
Score = 23.1 bits (48), Expect = 1.6, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 10 LWHLGHLTLFLLISKLNAQQKQQLRSVPIPLHMDEMLSAGRQV 52
L+H + F L++ ++ + Q P+PL +M +AG V
Sbjct: 565 LYHFANYN-FTLVATVSIHKMPQEGDTPVPLMGVKMKNAGNSV 606
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4220g033473
(138 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_804289 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.6
>M.Javanica_Scaff4220g033473 on XP_804289 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1048
Score = 23.5 bits (49), Expect = 5.6, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 28/57 (49%)
Query: 64 SLAEHSEQRRELRKTRELEVKQGEEELQLLEQLQNKNLSQRQPRKYINLQRRQKIYD 120
S +E + Q E +++ +G E +Q +Q ++L + ++ +++ + YD
Sbjct: 796 SRSEDNAQLSEGETSQQATPHEGSESMQRDSDVQTQDLQSEESTEFNDVEGSSESYD 852
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7440g048104
(85 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349036 PfEMP1 (Establishment) [Plasmodium falciparum] 27 0.14
AAC48337 AP33-1 (Adhesin) [Trichomonas vaginalis] 24 1.2
AAC48339 AP33-3 (Adhesin) [Trichomonas vaginalis] 24 1.2
XP_808800 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.9
XP_804506 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 7.3
XP_810383 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 7.4
XP_001609041 variant erythrocyte surface antigen-1, alpha subun... 22 9.4
>M.Javanica_Scaff7440g048104 on XP_001349036 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2192
Score = 26.9 bits (58), Expect = 0.14, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 7/41 (17%)
Query: 35 KRQWGW-----GGWGWTAHGAG--AEDGDVHGAGEDGAVDG 68
+R WGW G T G+G + G G+G+DGA G
Sbjct: 922 QRHWGWKCIPSGDNTTTREGSGEATKSGATTGSGKDGATGG 962
>M.Javanica_Scaff7440g048104 on AAC48337 AP33-1 (Adhesin) [Trichomonas vaginalis]
Length = 255
Score = 24.3 bits (51), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 7/14 (50%), Positives = 12/14 (85%)
Query: 26 DEEEFHARLKRQWG 39
++ +FH+RL RQ+G
Sbjct: 30 NQGQFHSRLMRQYG 43
>M.Javanica_Scaff7440g048104 on AAC48339 AP33-3 (Adhesin) [Trichomonas vaginalis]
Length = 255
Score = 24.3 bits (51), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 7/14 (50%), Positives = 12/14 (85%)
Query: 26 DEEEFHARLKRQWG 39
++ +FH+RL RQ+G
Sbjct: 30 NQGQFHSRLMRQYG 43
>M.Javanica_Scaff7440g048104 on XP_808800 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 776
Score = 22.7 bits (47), Expect = 3.9, Method: Composition-based stats.
Identities = 10/17 (58%), Positives = 11/17 (64%)
Query: 59 GAGEDGAVDGDAHGDGA 75
GE A DG AHGDG+
Sbjct: 738 ATGEGTARDGGAHGDGS 754
>M.Javanica_Scaff7440g048104 on XP_804506 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1012
Score = 21.9 bits (45), Expect = 7.3, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 14/42 (33%)
Query: 37 QWGWGGWGWTAHGAGAEDGDVHGAGEDGAVDGDAHGDGAEDG 78
Q GW WG G V G G V G EDG
Sbjct: 495 QSGWINWGEVQSPLNETTGAVQGRKLTGFVASGGAGVLMEDG 536
>M.Javanica_Scaff7440g048104 on XP_810383 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 928
Score = 21.9 bits (45), Expect = 7.4, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 41 GGWGWTAHGAGAEDGDVHGAGEDGAVDGDA 70
GG+G TA G A+ +VH +DG V+ A
Sbjct: 861 GGYGETAGGTDAQKEEVH--PQDGDVNATA 888
>M.Javanica_Scaff7440g048104 on XP_001609041 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1318
Score = 21.6 bits (44), Expect = 9.4, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 8 LLITFVIATIAIQYGMAQDEEEFHARLKRQWGWGGWGWTAH-GAGAEDGDVHGAGEDGAV 66
LL+ F + + I G+A D AR + G+ TAH + E V GE +
Sbjct: 373 LLLGFAVPSGLIGSGVANDYNGNTARNPFAMNYAGFVHTAHRDSFNEQAIVFNNGEGSST 432
Query: 67 -DGDAHGDGA 75
D D H GA
Sbjct: 433 SDIDQHKRGA 442
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3487g029429
(95 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350415 PfEMP1 (Establishment) [Plasmodium falciparum] 26 0.48
XP_816233 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.1
XP_821910 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 6.3
>M.Javanica_Scaff3487g029429 on XP_001350415 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3056
Score = 25.8 bits (55), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 14 NSPSTGKFPLETKIPSGDENCGD 36
N+P K+ + KIP+ +E C D
Sbjct: 946 NTPHGYKYACQCKIPTNEETCDD 968
>M.Javanica_Scaff3487g029429 on XP_816233 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 851
Score = 24.6 bits (52), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Query: 25 TKIPS-GDENCGDENSVYFLGDEYSAGDEDSENVGDESSEK---SWRRNFQRRKFRKPSR 80
T IP G + G EN+ LG Y+ G + GDE++++ +W+R + + R
Sbjct: 606 TPIPLLGAKMAGVENNPVLLGLSYNGGGKWQLLCGDETNKEISSTWKRG-TKHQVAIVLR 664
Query: 81 EGNYSSFEIGTCNVG 95
G + S + VG
Sbjct: 665 NGTHGSAYVDGVRVG 679
>M.Javanica_Scaff3487g029429 on XP_821910 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 853
Score = 22.3 bits (46), Expect = 6.3, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 24 ETKIPS-GDENCGDENSVYFLGDEYSAGDEDSENVGDESSEK---SWRR 68
+T IP G + G EN+ LG Y+ G + GDE++++ +W+R
Sbjct: 607 DTPIPLLGAKMAGVENNPVLLGLSYNGGGKWQLLCGDETNKEISSTWKR 655
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5299g038807
(290 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAA54437 CP3 (Cysteine protease) [Trichomonas vaginalis] 29 0.31
XP_827743 VSG (Establishment) [Trypanosoma brucei] 25 6.4
>M.Javanica_Scaff5299g038807 on CAA54437 CP3 (Cysteine protease) [Trichomonas vaginalis]
Length = 255
Score = 28.9 bits (63), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 77 DISNRFSVLQGLTEENQEKMLGSKPEIEEECEEGCEEECVEEVVIDTSQLNIKQTSSAVK 136
D S +F +G+T + + + + E+E + GC + V + ID S + + SS +
Sbjct: 194 DGSCKFKAAKGVTL-TKSYVRPTTTQNEDELKAGCAKGGVVSIAIDASGYDFQLYSSGIY 252
Query: 137 NP 138
NP
Sbjct: 253 NP 254
>M.Javanica_Scaff5299g038807 on XP_827743 VSG (Establishment) [Trypanosoma brucei]
Length = 503
Score = 25.0 bits (53), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 92 NQEKMLGSKPEIEEECEEGCE---EECVEEVVIDTSQLNIKQTSSA 134
N E S+ + +E+C++GC+ EC + +++ Q + SSA
Sbjct: 452 NSEAKKCSEKKKQEDCKDGCKWEGTECKDSSILENKQFALSMVSSA 497
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6278g043227
(83 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAX07967 alpha-10 giardin (Others) [Giardia duodenalis] 22 6.3
>M.Javanica_Scaff6278g043227 on AAX07967 alpha-10 giardin (Others) [Giardia duodenalis]
Length = 255
Score = 21.9 bits (45), Expect = 6.3, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 8 GGGSELLEMALSLLEVDEDQQLTIKGT 34
G +E L +ALS + DED + + GT
Sbjct: 187 AGDAEALRVALSGKKADEDAVVQLLGT 213
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3033g026754
(254 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_815845 Trans-sialidase (Invasion) [Trypanosoma cruzi] 32 0.024
XP_812339 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.32
XP_821378 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.42
XP_804800 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.6
XP_815315 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.3
XP_812243 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.5
XP_951757 VSG (Establishment) [Trypanosoma brucei] 25 5.7
XP_816303 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.1
XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum] 24 9.7
XP_807166 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 9.7
>M.Javanica_Scaff3033g026754 on XP_815845 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 936
Score = 32.3 bits (72), Expect = 0.024, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 88 CNG--PCKVNDCWNEDIGEDSISLFGKDSSANFYINGGGARNGNGKAVQFDGAGTLHVDN 145
C G P + ++ W +D + + + + Y++G R G G+A + + +
Sbjct: 630 CGGENPKEHSNTWEKDTTHQVVLMLQNGTQGSVYVDG--QRVGGGEACALENKDSKEISQ 687
Query: 146 FYIGNNYLGIRSCGNCLQQYSRTMYVNRLTVEN 178
FYIG G RS G +Q ++ V+ + + N
Sbjct: 688 FYIGG---GERSAGGAGRQEDVSVTVSNVLLYN 717
>M.Javanica_Scaff3033g026754 on XP_812339 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 949
Score = 28.9 bits (63), Expect = 0.32, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 88 CNG--PCKVNDCWNEDIGEDSISLFGKDSSANFYINGGGARNGNGKAVQFDGAGTLHVDN 145
C G P + ++ W +D + + + + Y++G R G G+A + + + +
Sbjct: 630 CGGKNPEEHSNTWEKDTTHQVVLMLQNGTQGSAYVDG--QRVGGGEACALENKDSKEISH 687
Query: 146 FYIGNN 151
FYIG +
Sbjct: 688 FYIGGD 693
>M.Javanica_Scaff3033g026754 on XP_821378 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 934
Score = 28.5 bits (62), Expect = 0.42, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 91 PCKVNDCWNEDIGEDSISLFGKDSSANFYINGGGARNGNGKAVQFDGAGTLHVDNFYIGN 150
P +++ W +D + L + + Y++ G R GNG+ + A + +FYIG
Sbjct: 633 PKELSSTWEKDTTHQVVILLRNGTQGSAYVD--GQRVGNGQ-FELKTAEANRISHFYIGG 689
Query: 151 NYLGIRSCGNCLQQYSRTMYVNRLTVEN 178
+ RS G +Q ++ V + + N
Sbjct: 690 DE---RSAGGAGRQEELSVTVRNVLLYN 714
>M.Javanica_Scaff3033g026754 on XP_804800 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 940
Score = 26.6 bits (57), Expect = 1.6, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 11/96 (11%)
Query: 97 CWNEDIGEDSISLFGKDSSANFYI---NGG-------GARNGNGKAVQFDGAGTLHVDNF 146
C I E+ S GK + + + NG G R G Q D A + + +F
Sbjct: 636 CGGAPISEELSSTLGKKRTDHVVLLIRNGSHGTAYVDGQRVGEDAQCQLDNADSKGISHF 695
Query: 147 YIGNNYLGIRSCGNCLQQYSRTMYVNR-LTVENLAA 181
YIG + R+ G+ + + NR L+ E + A
Sbjct: 696 YIGGDGDKTRNQGDVSVTVTNVLLYNRPLSSEEIGA 731
>M.Javanica_Scaff3033g026754 on XP_815315 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 799
Score = 26.2 bits (56), Expect = 2.3, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 209 TADQVYPCKVFDGNNNGGNPRVLTQEKTKGDGK 241
TA + + GNNN + EK KGDGK
Sbjct: 426 TASSLLYKRAGSGNNNNNEKLIALYEKKKGDGK 458
>M.Javanica_Scaff3033g026754 on XP_812243 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 802
Score = 26.2 bits (56), Expect = 2.5, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 209 TADQVYPCKVFDGNNNGGNPRVLTQEKTKGDGK 241
TA + + GNNN + EK KGDGK
Sbjct: 429 TASSLLYKRAGSGNNNNNEKLIALYEKKKGDGK 461
>M.Javanica_Scaff3033g026754 on XP_951757 VSG (Establishment) [Trypanosoma brucei]
Length = 476
Score = 24.6 bits (52), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 196 DKAYLTNIHILGSTADQVYP-CKVFDGNN 223
DKA+L ++ +L TA + P C + D NN
Sbjct: 2 DKAFLISLPLLTMTAAETNPNCSIQDHNN 30
>M.Javanica_Scaff3033g026754 on XP_816303 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 955
Score = 24.6 bits (52), Expect = 6.1, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
Query: 111 GKDSSANFYINGGGARNGNGKAVQFDGAGTLHVDNFYIGNN 151
G SSA Y++G R G+ K +FD A + + +FYIG +
Sbjct: 665 GNQSSA--YVDG--KRLGD-KQCEFDNADSKEISHFYIGGD 700
>M.Javanica_Scaff3033g026754 on XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2980
Score = 24.3 bits (51), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 13/67 (19%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Query: 154 GIRSCGNCLQQYSRTMYVNRLTVENLAAGQFIVGVNNNTNFKDKAYLTNIHILGSTADQV 213
G + +C++++ + ++ L ++ NN ++ K L +H + +
Sbjct: 2317 GYQCIKDCVEKWIQNKREEWKKIKELYLQEY--KNNNQPDYLVKIILEELHPQTQLNEAI 2374
Query: 214 YPCKVFD 220
PCK FD
Sbjct: 2375 KPCKTFD 2381
>M.Javanica_Scaff3033g026754 on XP_807166 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 801
Score = 24.3 bits (51), Expect = 9.7, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 21/49 (42%)
Query: 56 KWGSGEFQLPVFNLASGATIERCIYSGVDGIHCNGPCKVNDCWNEDIGE 104
K G LPV +G T+ IY+ DG + + + C + + E
Sbjct: 265 KMKDGTLVLPVEGTKNGKTVSLIIYTATDGGNLSKGMSADGCSDPSVVE 313
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7g000184
(71 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff27575g093916
(159 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3019g026658
(74 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAK19757 MIC8 (Invasion) [Toxoplasma gondii] 25 0.56
>M.Javanica_Scaff3019g026658 on AAK19757 MIC8 (Invasion) [Toxoplasma gondii]
Length = 255
Score = 24.6 bits (52), Expect = 0.56, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 16 CDHAWTHLTTTMAETFTCRHRPMGCRRDACAKP 48
CD TH + + TC+ +P C + C P
Sbjct: 191 CDCPETHKLIVVEDKETCKAKPDFCAEEPCGPP 223
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5131g037997
(79 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Q03077 Lgl2 (Adhesin) [Entamoeba histolytica] 23 1.6
XP_656145 Lgl1 (Adhesin) [Entamoeba histolytica] 23 1.6
XP_001350796 PfEMP1 (Establishment) [Plasmodium falciparum] 22 4.9
XP_001351877 PfEMP1 (Establishment) [Plasmodium falciparum] 22 9.1
>M.Javanica_Scaff5131g037997 on Q03077 Lgl2 (Adhesin) [Entamoeba histolytica]
Length = 288
Score = 23.5 bits (49), Expect = 1.6, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 40 SCRWNTFKQSDTLVYRLDIQM 60
+ +W T+K+ L YRLD+ +
Sbjct: 220 TLKWPTYKRHFYLPYRLDVDL 240
>M.Javanica_Scaff5131g037997 on XP_656145 Lgl1 (Adhesin) [Entamoeba histolytica]
Length = 288
Score = 23.5 bits (49), Expect = 1.6, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 40 SCRWNTFKQSDTLVYRLDIQM 60
+ +W T+K+ L YRLD+ +
Sbjct: 220 TLKWPTYKRHFYLPYRLDVDL 240
>M.Javanica_Scaff5131g037997 on XP_001350796 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2646
Score = 22.3 bits (46), Expect = 4.9, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Query: 37 FDDSC--RWNTFKQSDTLVYRLDIQMRNLKMPSPSCKLK 73
FD+SC ++ KQ D+ ++ ++NL+ CK +
Sbjct: 2022 FDNSCGCSFSAHKQKDSNQDSIECMIKNLEKKIDECKTQ 2060
>M.Javanica_Scaff5131g037997 on XP_001351877 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2270
Score = 21.6 bits (44), Expect = 9.1, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 38 DDSCRWNTFKQSDTLVYRLDIQMRNLKMPSPSCKLKILMC 77
DD + + K D L+YR+D++ K + LK C
Sbjct: 1602 DDDMKSSVKKILDPLIYRMDLKNGKRKFDELTDFLKAYEC 1641
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6642g044840
(162 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum] 26 1.3
>M.Javanica_Scaff6642g044840 on XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3954
Score = 26.2 bits (56), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 18/68 (26%)
Query: 62 HLLPGFGKVHSKLPTKAL-----------LKKD-------KVYTWCSCGYSGSQPLCDGT 103
HL+ F K++ KLP K L+KD KV+ C S+ C G
Sbjct: 1042 HLISIFEKINEKLPEKEQKKYSNDGKYLDLRKDWWEANRYKVWKAMKCATKNSKIPCSGI 1101
Query: 104 HLTVYLPK 111
+ Y+P+
Sbjct: 1102 PIEDYIPQ 1109
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3177g027631
(554 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_805896 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 9.2
>M.Javanica_Scaff3177g027631 on XP_805896 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 692
Score = 25.4 bits (54), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 7/69 (10%)
Query: 68 TTASTTTSTAASLATGASGVSLDTSSAASLAPANVTTINYIYLNNSVTQSANSYSTSNST 127
T S TST SGV+L + A T+ Y + NN T SA +
Sbjct: 498 TVGSGVTSTE-------SGVALKGAGAEWPVGDMGQTVPYYFTNNKFTLSATVFIHEVPK 550
Query: 128 SGSCPCVLV 136
+GS P L+
Sbjct: 551 AGSIPVPLI 559
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff8214g051123
(135 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_808840 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.52
XP_808213 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.1
XP_813500 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.3
XP_813143 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 6.9
XP_817996 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 8.7
XP_809198 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 9.8
>M.Javanica_Scaff8214g051123 on XP_808840 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 821
Score = 26.6 bits (57), Expect = 0.52, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 13 LLLLKRAISEELNATRQAAARQPSAESPNVSNARQRRN 50
LLL+K IS E ++T ++ + + + P +SN RQ ++
Sbjct: 213 LLLVKGNISNEADSTNKSILWKDTYDLPWISNGRQEQS 250
>M.Javanica_Scaff8214g051123 on XP_808213 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 819
Score = 25.0 bits (53), Expect = 2.1, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 13 LLLLKRAISEELNATRQAAARQPSAESPNVSNARQRRN 50
LLL+K IS E +T + + + + P +SN RQ ++
Sbjct: 213 LLLVKGNISNEAGSTNKRILWKDTYDLPWISNGRQEQS 250
>M.Javanica_Scaff8214g051123 on XP_813500 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 898
Score = 24.6 bits (52), Expect = 2.3, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 13 LLLLKRAISEELNATRQAAARQPSAESPNVSNARQRRN 50
LLL+K IS E +T + + + + P +SN RQ ++
Sbjct: 213 LLLVKGNISNEAGSTNKRILWKDTYDLPWISNGRQEQS 250
>M.Javanica_Scaff8214g051123 on XP_813143 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 795
Score = 23.1 bits (48), Expect = 6.9, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 13 LLLLKRAISEELNATRQAAARQPSAESPNVSNARQRRN 50
LLL+K I+ E +T + + + + P +SN RQ ++
Sbjct: 214 LLLVKGNINNEEGSTNKRILWKDTYDLPWISNGRQEQS 251
>M.Javanica_Scaff8214g051123 on XP_817996 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 792
Score = 23.1 bits (48), Expect = 8.7, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 13 LLLLKRAISEELNATRQAAARQPSAESPNVSNARQRRN 50
LLL+K I+ E +T + + + + P +SN RQ ++
Sbjct: 174 LLLVKGNINNEEGSTNKRILWKDTYDLPWISNGRQEQS 211
>M.Javanica_Scaff8214g051123 on XP_809198 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 832
Score = 22.7 bits (47), Expect = 9.8, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 13 LLLLKRAISEELNATRQAAARQPSAESPNVSNARQRRN 50
LLL+K I+ E +T + + + + P +SN RQ ++
Sbjct: 213 LLLVKGNINNEEGSTNKRILWKDTYDLPWISNGRQEQS 250
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5433g039444
(130 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_821526 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.3
XP_001351079 PfEMP1 (Establishment) [Plasmodium falciparum] 24 4.5
XP_001351080 PfEMP1 (Establishment) [Plasmodium falciparum] 23 7.0
XP_001347690 PfEMP1 (Establishment) [Plasmodium falciparum] 23 8.1
>M.Javanica_Scaff5433g039444 on XP_821526 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 983
Score = 23.9 bits (50), Expect = 4.3, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 34 YNDKGFGACGQQINAETEMLVAISHTQWIGGNPNND 69
Y+ A G+ + A T + VA + GG PN +
Sbjct: 397 YDVGQISAVGENVAASTLLYVAAKASSLKGGEPNKE 432
>M.Javanica_Scaff5433g039444 on XP_001351079 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2203
Score = 23.9 bits (50), Expect = 4.5, Method: Composition-based stats.
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 65 NPNNDPICRNICLKVDYKGKSIT 87
N +ND + +C+ Y+G+S+T
Sbjct: 136 NIDNDTLLAEVCMAAYYEGESLT 158
>M.Javanica_Scaff5433g039444 on XP_001351080 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2209
Score = 23.1 bits (48), Expect = 7.0, Method: Composition-based stats.
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 64 GNPNNDPICRNICLKVDYKGKSI 86
G NND + ++CL ++G SI
Sbjct: 137 GKINNDTLLADVCLAALHEGDSI 159
>M.Javanica_Scaff5433g039444 on XP_001347690 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 23.1 bits (48), Expect = 8.1, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 35 NDKGFGACGQQINAETEMLVAISHTQWIGGNPNNDPICRNICLKVDYKGKSIT 87
+D+G A +++N L IS+ G NND + ++CL ++G +I+
Sbjct: 112 DDEGACAPYRRLNLCVRNLENISNY----GKINNDTLLADVCLAALHEGAAIS 160
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff28188g094723
(123 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349533 PfEMP3 (Establishment) [Plasmodium falciparum] 25 2.2
XP_802557 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.6
XP_001612314 variant erythrocyte surface antigen-1, alpha subun... 24 2.9
XP_001351876 PfEMP1 (Establishment) [Plasmodium falciparum] 24 4.4
XP_805204 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.6
XP_001609619 variant erythrocyte surface antigen-1, beta subuni... 23 6.1
XP_814927 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 7.0
XP_001609166 variant erythrocyte surface antigen-1, beta subuni... 23 9.8
>M.Javanica_Scaff28188g094723 on XP_001349533 PfEMP3 (Establishment) [Plasmodium falciparum]
Length = 2441
Score = 24.6 bits (52), Expect = 2.2, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 57 KGKEQINE----FVRFEEDELKQNEEVENVGEVGESSSSSARGKGIMKKG 102
KGKE N+ +EE + +N E++N G G ++ + K + KG
Sbjct: 1041 KGKEVTNKARENLEEYEEKDYMKNNELQNKGSDGLKENAELKNKELRNKG 1090
>M.Javanica_Scaff28188g094723 on XP_802557 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 608
Score = 24.3 bits (51), Expect = 2.6, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 34/86 (39%), Gaps = 25/86 (29%)
Query: 42 FGCSCFKVESSSHSKKGKEQINEFVR---------------FEEDELKQ----------N 76
+G + +V +SH +KG N F++ + +D+ KQ N
Sbjct: 189 YGETLTRVWGNSHDRKGHGVQNAFIKVTIEDKDVMLVTLPVYPKDDNKQKGRLHLWLTDN 248
Query: 77 EEVENVGEVGESSSSSARGKGIMKKG 102
V +VG V + +A +MK G
Sbjct: 249 TRVYDVGPVSRETDDAAASSLLMKSG 274
>M.Javanica_Scaff28188g094723 on XP_001612314 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1308
Score = 24.3 bits (51), Expect = 2.9, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 23 CECPKNGQKSVGVRRFKRGFGCSCFKVESSSHSKKGKEQI 62
C C +NG+ S+ +R K + S ++VE GKE +
Sbjct: 241 CSCIENGKNSLRIREHKDSYR-SAYEVELVYEWNIGKEYL 279
>M.Javanica_Scaff28188g094723 on XP_001351876 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3164
Score = 23.9 bits (50), Expect = 4.4, Method: Composition-based stats.
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 48 KVESSSHSKKGKEQINEFVRFEE 70
K+ES+S + KG E+I F F E
Sbjct: 560 KMESNSENNKGAEKITSFHEFFE 582
>M.Javanica_Scaff28188g094723 on XP_805204 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 978
Score = 23.5 bits (49), Expect = 4.6, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 33/86 (38%), Gaps = 25/86 (29%)
Query: 42 FGCSCFKVESSSHSKKGKEQINEFVR---------------FEEDELKQ----------N 76
+G + +V +SH +KG N F++ + +D+ KQ N
Sbjct: 295 YGETLTRVWGNSHDRKGHGVQNAFIKVTIEDKDVMLVTLPVYPKDDNKQKGRLHLWLTDN 354
Query: 77 EEVENVGEVGESSSSSARGKGIMKKG 102
V +VG V +A +MK G
Sbjct: 355 TRVYDVGPVSREDDDAAASSLLMKSG 380
>M.Javanica_Scaff28188g094723 on XP_001609619 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1086
Score = 23.1 bits (48), Expect = 6.1, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Query: 38 FKRGFGCSCFKVESSSHSKKGKEQINEFVRFEEDELK 74
+K GFG + + HS KG ++ +EF+R E L+
Sbjct: 963 YKYGFG---YGNVTELHSTKGLKKCHEFLRTLESVLQ 996
>M.Javanica_Scaff28188g094723 on XP_814927 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 759
Score = 23.1 bits (48), Expect = 7.0, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 19/34 (55%)
Query: 69 EEDELKQNEEVENVGEVGESSSSSARGKGIMKKG 102
+ ++ K++ + E+ E G+S G G M++G
Sbjct: 707 DSEDKKESGDSEDKKESGDSEDKKGSGDGSMREG 740
>M.Javanica_Scaff28188g094723 on XP_001609166 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1161
Score = 22.7 bits (47), Expect = 9.8, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 18/79 (22%)
Query: 6 ILIFFLLIYVNIS-------------IGKNCECPKNGQKSVGVRRFKRGFGCSCFKVESS 52
IL FF+L+ V +S +CP+ VG + F + KV +
Sbjct: 1012 ILEFFVLVLVKVSQKFGGTFAESSIRAPSAQQCPRGSNSVVGTHKKCHEFLGTLDKVLTG 1071
Query: 53 SHSKKGKE-----QINEFV 66
H K G + +IN+ +
Sbjct: 1072 DHLKNGSKKGLHYEINQLI 1090
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2866g025717
(193 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAA87086 Hsp70 (Heat shock protein) [Eimeria tenella] 28 0.40
XP_001609041 variant erythrocyte surface antigen-1, alpha subun... 24 6.2
XP_001609167 variant erythrocyte surface antigen-1, alpha subun... 24 6.6
XP_809580 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 7.3
>M.Javanica_Scaff2866g025717 on CAA87086 Hsp70 (Heat shock protein) [Eimeria tenella]
Length = 255
Score = 27.7 bits (60), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 19 SSLGKDERNSITKLI----NNQRSALAN-GKMSNLPPASDMNELTYSTLFEGMAQSLARD 73
S LG+D ++ + ++QR A + GK++ L +NE T + L GM + R
Sbjct: 184 SYLGRDVNQAVITVPAYFNDSQRQATKDAGKIAGLDVLRIINEPTAAALAYGMEKEDGRT 243
Query: 74 CSNNNMGGG 82
+ ++GGG
Sbjct: 244 IAVYDLGGG 252
>M.Javanica_Scaff2866g025717 on XP_001609041 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1318
Score = 24.3 bits (51), Expect = 6.2, Method: Composition-based stats.
Identities = 9/12 (75%), Positives = 9/12 (75%)
Query: 169 GNCSNNKCDKGS 180
GNC NKC KGS
Sbjct: 1134 GNCDPNKCRKGS 1145
>M.Javanica_Scaff2866g025717 on XP_001609167 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1317
Score = 24.3 bits (51), Expect = 6.6, Method: Composition-based stats.
Identities = 9/12 (75%), Positives = 9/12 (75%)
Query: 169 GNCSNNKCDKGS 180
GNC NKC KGS
Sbjct: 1134 GNCDPNKCRKGS 1145
>M.Javanica_Scaff2866g025717 on XP_809580 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 776
Score = 23.9 bits (50), Expect = 7.3, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 15/63 (23%)
Query: 74 CSNNNMGGGVSHYSTDKIIQTNDALFQEAVDAWASESEDVDSSSLKPNENAKNFAQAFYS 133
C +GGG S I+TND F V+A ++ED N K + YS
Sbjct: 252 CLTQLIGGGGSG------IKTNDGTFLFPVEARKKQNED---------GNTKTVSLILYS 296
Query: 134 KNT 136
K+T
Sbjct: 297 KDT 299
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2797g025285
(823 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_821084 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 1.3
>M.Javanica_Scaff2797g025285 on XP_821084 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 965
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 27/64 (42%)
Query: 175 LPSMLSAQSTNQGKLLRALMAREFETDFDDEETNASAVLSVHPLMNMLNEKQQKTAKILL 234
L S S G LL + A E+ T DEE A +V + + K K +K +
Sbjct: 258 LGSGGSGVKMEDGTLLFPMEAEEYRTGKADEENTAGMGYTVSLFIYFPDNKSWKLSKGMS 317
Query: 235 EDGC 238
DGC
Sbjct: 318 ADGC 321
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff8322g051536
(366 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum] 27 2.8
XP_001349219 PfEMP1 (Establishment) [Plasmodium falciparum] 25 6.5
XP_817007 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 8.1
>M.Javanica_Scaff8322g051536 on XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2238
Score = 26.6 bits (57), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 123 GNNTTIVKSTTTPSSSNNSTIKSTKTNDNQITTAT-----IKSSKIPSETTNTP 171
GNNTT + TT S +N + + T TTA+ I++ IPS+T NTP
Sbjct: 1859 GNNTTASGNNTTASGNNTTASGNNTTASGNNTTASDTQNDIQNDGIPSDTPNTP 1912
>M.Javanica_Scaff8322g051536 on XP_001349219 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2595
Score = 25.4 bits (54), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 52/129 (40%), Gaps = 31/129 (24%)
Query: 123 GNNTTIVKSTTTPSSSN------------------NSTIKSTKTNDNQITTATIKSSKIP 164
GNNTT + TT S +N N I S+K DN+ T+K I
Sbjct: 2215 GNNTTASGNNTTASGNNTTASGNNTTASDTQNDIQNDGIPSSKITDNEWN--TLKDEFIS 2272
Query: 165 SETTNTPPSNN--------NSTIKSTKQTNNQ---ITTPIAQKSTIVPSETTTTQSTSGN 213
NT P+NN N+ I +T + N + T I ++ E + + S N
Sbjct: 2273 QYLPNTEPNNNYRSGNSPTNTNITTTSRHNMEEKPFITSIHDRNLYTGEEISYNINMSTN 2332
Query: 214 SLVVPQVIT 222
S+ P+ ++
Sbjct: 2333 SMDDPKYVS 2341
>M.Javanica_Scaff8322g051536 on XP_817007 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 910
Score = 25.0 bits (53), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 52/122 (42%), Gaps = 9/122 (7%)
Query: 119 DQKKGNNTTIVKSTTTPSSSNNSTIKSTKTNDNQITTATIKSSKIPSETTNTPPSNNNST 178
+Q KG+N +TP++S +T S K NQ T+ T S + +++ S+ + T
Sbjct: 761 EQPKGSNGARAGGASTPATSTAAT-SSGKEPVNQQTSGTSPSGNKNVDVSSS--SDADPT 817
Query: 179 I----KSTKQTNNQITTPIAQKSTIVPSETTTTQSTSGNSLVVPQVITTKDTCL--SLSN 232
+ T Q + TP S+ ETT G + PQ K L SL N
Sbjct: 818 VVTGSGETVQGDGSPQTPEVSMSSGEDGETTEGTDAQGEEGIHPQAGEVKSAALSSSLGN 877
Query: 233 AS 234
+S
Sbjct: 878 SS 879
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5252g038548
(286 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_805183 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.7
XP_804289 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.6
>M.Javanica_Scaff5252g038548 on XP_805183 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 231
Score = 25.8 bits (55), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 191 KRAKRGPLVGNWQEKCKPCMCVYKVVTVNVRTHF 224
+ K+G + N + CK C K +NV +HF
Sbjct: 88 QNGKQGSIYVNGKLVCKDAQCELKNTDINVVSHF 121
>M.Javanica_Scaff5252g038548 on XP_804289 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1048
Score = 25.4 bits (54), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Query: 77 DNIPLCHGRYNEGQF-THKIYHL 98
D +CH +YNE F +H+I H
Sbjct: 647 DGEEICHTKYNESLFDSHRISHF 669
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5339g039011
(186 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_843645 VSG (Establishment) [Trypanosoma brucei] 23 9.2
>M.Javanica_Scaff5339g039011 on XP_843645 VSG (Establishment) [Trypanosoma brucei]
Length = 569
Score = 23.5 bits (49), Expect = 9.2, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 21/53 (39%), Gaps = 7/53 (13%)
Query: 20 SGDCEDDWTSMADENGISIGFKL--FKRDYKINYYHAQVICKENGANVAIIHN 70
S C D TS D G+ G KL F R + Q CKE A+ N
Sbjct: 259 SDSCTDTATSDTDNFGVGSGMKLKAFNR-----WKQLQTKCKEQNPAKAVTLN 306
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6028g042123
(103 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff26386g092275
(233 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001610713 variant erythrocyte surface antigen-1, alpha subun... 32 0.033
XP_001609040 variant erythrocyte surface antigen-1, alpha subun... 30 0.10
XP_001609751 variant erythrocyte surface antigen-1, alpha subun... 27 1.1
XP_001609935 variant erythrocyte surface antigen-1, alpha subun... 27 1.2
XP_001349032 PfEMP1 (Establishment) [Plasmodium falciparum] 27 1.3
XP_001609033 variant erythrocyte surface antigen-1, alpha subun... 27 1.6
XP_001609041 variant erythrocyte surface antigen-1, alpha subun... 27 1.7
XP_001611441 variant erythrocyte surface antigen-1, beta subuni... 26 2.4
AAK19757 MIC8 (Invasion) [Toxoplasma gondii] 25 3.6
XP_001610196 variant erythrocyte surface antigen-1, alpha subun... 25 3.7
XP_001611365 variant erythrocyte surface antigen-1, alpha subun... 25 3.9
XP_001608670 variant erythrocyte surface antigen-1, alpha subun... 25 4.3
>M.Javanica_Scaff26386g092275 on XP_001610713 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1294
Score = 32.0 bits (71), Expect = 0.033, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 66 VNETCEQCKHRICDYP-CSVSDSACKNCQRIDVPKLCKTC 104
+++T +Q K IC+ P CS DS K C + P +C+TC
Sbjct: 788 LHKTIDQIKD-ICNTPKCSACDSHSKKCGQPSTPSICRTC 826
>M.Javanica_Scaff26386g092275 on XP_001609040 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1335
Score = 30.4 bits (67), Expect = 0.10, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 17/43 (39%), Gaps = 9/43 (20%)
Query: 28 CQKCAKDVCGPP---------CKTSKSACDNCKTIDLPKRCGC 61
C KC D CG P CK S C + ++CGC
Sbjct: 178 CDKCDGDKCGKPGAGGGCQCQCKGGASGCTSASDCKCDRKCGC 220
>M.Javanica_Scaff26386g092275 on XP_001609751 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1298
Score = 26.9 bits (58), Expect = 1.1, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Query: 77 ICDYP-CSVSDSACKNCQRIDVPKLCKTC 104
IC++P CS D C + P +C+TC
Sbjct: 810 ICNFPKCSACDQHGDKCGQPSNPTICQTC 838
>M.Javanica_Scaff26386g092275 on XP_001609935 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1317
Score = 26.9 bits (58), Expect = 1.2, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 77 ICDYP-CSVSDSACKNCQRIDVPKLCKTC 104
IC+ P CS D C + VP+ C TC
Sbjct: 838 ICNSPKCSACDQHSAKCGKPPVPRQCPTC 866
Score = 25.4 bits (54), Expect = 3.2, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 118 ICDYP-CKSSKSACNNCQKIDVPKQCESC 145
IC+ P C + C K VP+QC +C
Sbjct: 838 ICNSPKCSACDQHSAKCGKPPVPRQCPTC 866
>M.Javanica_Scaff26386g092275 on XP_001349032 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2267
Score = 26.9 bits (58), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 63/161 (39%), Gaps = 18/161 (11%)
Query: 28 CQKCAKDVCGPPCKTSKSACDNCKTIDLPKRCGCCFPAVNETCEQCKHRICDYPCSVSDS 87
+ D CG + K+ NC+ ID P C + CE+ K +Y ++SD
Sbjct: 1240 LHEWGSDFCGKRARMLKNVKHNCRNIDNPGHQYCSGDGYD--CEKIKPE--NYK-NISDL 1294
Query: 88 ACKNCQRIDVPKLC-KTCPAVKESCKECKNRICDYPCKSSKSACNNCQKIDVPKQCE--- 143
C++C K C K +++ +E + Y + K +NC D + CE
Sbjct: 1295 DCRDCY-----KQCRKYRKWIEKKVEEFHKQEKKYKGEHGKLRNDNCSGNDNKEYCEQIK 1349
Query: 144 ---SCPSYNSTCSDCKNRVCGHPCSIKNDQACNNCIELDLP 181
S + + CKN + D+ NN I+ + P
Sbjct: 1350 QKTSAADFLAALKHCKNDQIDGEQGNQEDKK-NNEIKFEEP 1389
>M.Javanica_Scaff26386g092275 on XP_001609033 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1270
Score = 26.6 bits (57), Expect = 1.6, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 23/60 (38%), Gaps = 15/60 (25%)
Query: 86 DSACKNCQRIDVPKLCKTCPAVK--------------ESCKECKNRICDYPCKSSKSACN 131
DS+CK Q D C TC +K C+ CK+ PC S S C+
Sbjct: 84 DSSCKYLQDKDSENKCDTCGCMKWVKPQRGIDWVQLGRGCQRCKDEKQKTPC-SCASGCS 142
>M.Javanica_Scaff26386g092275 on XP_001609041 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1318
Score = 26.6 bits (57), Expect = 1.7, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 77 ICDYP-CSVSDSACKNCQRIDVPKLCKTC 104
IC+ P CS +S C + P C+TC
Sbjct: 833 ICNSPKCSACESHSTKCGKPPTPSFCQTC 861
>M.Javanica_Scaff26386g092275 on XP_001611441 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1205
Score = 25.8 bits (55), Expect = 2.4, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 26/67 (38%), Gaps = 9/67 (13%)
Query: 97 VPKLCKTCPAVKESCKECKNRICDYPCKSSKSACNNCQKIDVPKQCESCPSYNSTCSDCK 156
+ K+C+ CP +C C S CQ PKQC +YN T +
Sbjct: 150 IGKVCE-CPGTGGGGAQC--------CSPGTSGSGTCQCATNPKQCCYKSAYNKTEALWT 200
Query: 157 NRVCGHP 163
+ V G P
Sbjct: 201 DIVNGTP 207
>M.Javanica_Scaff26386g092275 on AAK19757 MIC8 (Invasion) [Toxoplasma gondii]
Length = 255
Score = 25.0 bits (53), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 11/60 (18%)
Query: 19 IIASENKENCQK----CAKDVCGPPCKTSKSACDNCKTIDLPKRCGC--CFPAVNETCEQ 72
+I E+KE C+ CA++ CGPP S +NC D C C + N CE+
Sbjct: 199 LIVVEDKETCKAKPDFCAEEPCGPP-----SMVENCVNTDDSYECVCKQGYEVRNGRCEE 253
>M.Javanica_Scaff26386g092275 on XP_001610196 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1330
Score = 25.4 bits (54), Expect = 3.7, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 118 ICDYP-CKSSKSACNNCQKIDVPKQCESC 145
IC+ P C S KS N C + K C+ C
Sbjct: 839 ICNSPKCPSCKSHSNKCGRQPQSKYCDKC 867
>M.Javanica_Scaff26386g092275 on XP_001611365 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1335
Score = 25.4 bits (54), Expect = 3.9, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 118 ICDYP-CKSSKSACNNCQKIDVPKQCESC 145
IC+ P C S KS N C + K C+ C
Sbjct: 845 ICNSPKCPSCKSHSNKCGRQPQSKYCDKC 873
>M.Javanica_Scaff26386g092275 on XP_001608670 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1320
Score = 25.0 bits (53), Expect = 4.3, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 66 VNETCEQCKHRICDYP-CSVSDSACKNCQRIDVPKLCKTC 104
+++T +Q K IC+ P C S C + P +CKTC
Sbjct: 830 LHKTIDQIKD-ICNSPKCPSCKSHSTKCGKEGKPTICKTC 868
Score = 25.0 bits (53), Expect = 4.8, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 118 ICDYP-CKSSKSACNNCQKIDVPKQCESC 145
IC+ P C S KS C K P C++C
Sbjct: 840 ICNSPKCPSCKSHSTKCGKEGKPTICKTC 868
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff8279g051392
(259 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349030 PfEMP1 (Establishment) [Plasmodium falciparum] 25 5.6
>M.Javanica_Scaff8279g051392 on XP_001349030 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 25.0 bits (53), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Query: 40 SQIKVEEVDNDLRESTGMEEYLDSLF--KHNVF 70
+QIK E +D D ++ +G EY + +F K+NV
Sbjct: 1240 AQIKHECMDGDTQKYSGDGEYCEEIFSKKYNVL 1272
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5184g038258
(81 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_966151 TLP (Invasion) [Plasmodium falciparum] 24 1.7
XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum] 23 3.8
XP_001608665 variant erythrocyte surface antigen-1, alpha subun... 23 4.1
>M.Javanica_Scaff5184g038258 on XP_966151 TLP (Invasion) [Plasmodium falciparum]
Length = 1371
Score = 23.9 bits (50), Expect = 1.7, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 28 QERVDLTIKEEEQLMPEISTIINRNKRS 55
QE +D+ KEE+ + + + R KRS
Sbjct: 1054 QENIDILSKEEDNISSNYNNELQRTKRS 1081
>M.Javanica_Scaff5184g038258 on XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3119
Score = 22.7 bits (47), Expect = 3.8, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 35 IKEEEQLMPEISTIINRNKRSKPCFRTAGSII 66
+KEE ++ +S + +NK S + TA I
Sbjct: 1613 VKEENDVVAFLSQLYEKNKGSNTIYSTAAGYI 1644
>M.Javanica_Scaff5184g038258 on XP_001608665 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1326
Score = 22.7 bits (47), Expect = 4.1, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 39 EQLMPEISTIINRNKRSKPCFRTAGSIIGGCN 70
E +P S + RN S+ + A S +G CN
Sbjct: 909 EDRLPGFSCDVVRNNDSEQPYPPAASHLGHCN 940
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff25954g091669
(94 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum] 25 1.2
>M.Javanica_Scaff25954g091669 on XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3119
Score = 24.6 bits (52), Expect = 1.2, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 15 ILKALLINGQF--PRWEERTFYCSSCEFD 41
+LK L N +F P +ER +Y S+C+ D
Sbjct: 46 VLKGNLRNAKFYHPFSKERPYYKSACDLD 74
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2851g025611
(50 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff29320g096199
(58 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5586g040121
(584 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_814441 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 1.6
AAK31231 variable surface protein 14e (Establishment) [Giardi... 26 4.1
AAK31229 variable surface protein 14c (Establishment) [Giardi... 26 4.1
AAK31227 variable surface protein 14a (Establishment) [Giardi... 26 4.2
AAK31245 variable surface protein IVc (Establishment) [Giardi... 26 4.2
XP_812309 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 5.0
XP_844695 VSG (Establishment) [Trypanosoma brucei] 26 5.4
XP_821669 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 7.8
XP_820143 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 8.3
>M.Javanica_Scaff5586g040121 on XP_814441 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 931
Score = 28.1 bits (61), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 47/119 (39%), Gaps = 22/119 (18%)
Query: 9 LFIFHIWLILQVNCKGNG---------------KDKGKNLAS-EDVESTGGPSKWKVAQK 52
LF + L++ + C G+G K +G N + E VES G PS KV
Sbjct: 43 LFYPAVLLLVVMVCCGSGAAQVVVEEPLSGLQFKWRGINESGGETVESLGAPSLLKVGND 102
Query: 53 AFGRVLSLKKKDNVKSQGGPSSQNSNGKGPKNSSTIKKPESHKKSAKEVESDYGSDSEG 111
F + KK+ S G +SQ P + T PE K +K+ D+ G
Sbjct: 103 VFAVAEAQCKKNGGVSFTGVASQ------PLTTETADTPEEVLKESKDWTKVLEEDASG 155
>M.Javanica_Scaff5586g040121 on AAK31231 variable surface protein 14e (Establishment) [Giardia
duodenalis]
Length = 157
Score = 26.2 bits (56), Expect = 4.1, Method: Composition-based stats.
Identities = 13/21 (61%), Positives = 14/21 (66%)
Query: 66 VKSQGGPSSQNSNGKGPKNSS 86
VK+ GG SS NS G GP SS
Sbjct: 115 VKTSGGGSSDNSTGGGPNLSS 135
>M.Javanica_Scaff5586g040121 on AAK31229 variable surface protein 14c (Establishment) [Giardia
duodenalis]
Length = 158
Score = 26.2 bits (56), Expect = 4.1, Method: Composition-based stats.
Identities = 13/21 (61%), Positives = 14/21 (66%)
Query: 66 VKSQGGPSSQNSNGKGPKNSS 86
VK+ GG SS NS G GP SS
Sbjct: 116 VKTSGGGSSDNSTGGGPNLSS 136
>M.Javanica_Scaff5586g040121 on AAK31227 variable surface protein 14a (Establishment) [Giardia
duodenalis]
Length = 157
Score = 25.8 bits (55), Expect = 4.2, Method: Composition-based stats.
Identities = 13/21 (61%), Positives = 14/21 (66%)
Query: 66 VKSQGGPSSQNSNGKGPKNSS 86
VK+ GG SS NS G GP SS
Sbjct: 115 VKTSGGGSSDNSTGGGPNLSS 135
>M.Javanica_Scaff5586g040121 on AAK31245 variable surface protein IVc (Establishment) [Giardia
duodenalis]
Length = 157
Score = 25.8 bits (55), Expect = 4.2, Method: Composition-based stats.
Identities = 13/21 (61%), Positives = 14/21 (66%)
Query: 66 VKSQGGPSSQNSNGKGPKNSS 86
VK+ GG SS NS G GP SS
Sbjct: 115 VKTSGGGSSDNSTGGGPNLSS 135
>M.Javanica_Scaff5586g040121 on XP_812309 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 827
Score = 26.6 bits (57), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 41/108 (37%), Gaps = 16/108 (14%)
Query: 9 LFIFHIWLILQVNCKGNGKDKGK---------------NLASEDVESTGGPSKWKVAQKA 53
LF + L++ + C G+G G + E VES G PS KV
Sbjct: 43 LFYSAVLLLVVLMCCGSGGTAGVAGQSSGPQFKWRGINDGGGETVESLGAPSLLKVGNDV 102
Query: 54 FGRVLSLKKKDNVKSQGGPSSQNSNGKGPKN-SSTIKKPESHKKSAKE 100
F + KK+ S G +SQ K +KKP+ + +E
Sbjct: 103 FAVAEAQCKKNGGVSFTGVASQPLTTKTANTPEEVLKKPKGETRVLEE 150
>M.Javanica_Scaff5586g040121 on XP_844695 VSG (Establishment) [Trypanosoma brucei]
Length = 476
Score = 26.2 bits (56), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Query: 380 SRQIRPTKKQPSGANIEPDNESESNDFKQRSVGRSQSMRNPI----MTTNMPVGRNNANS 435
++ IR KKQPS + ++ E ND K +S +S + + V A +
Sbjct: 391 AKLIRE-KKQPSKTQAQDGSDQEENDCKTKSKDECKSGKCELKGGKCVEKEEVKVEGAGT 449
Query: 436 RGTHNST 442
+GT N+T
Sbjct: 450 QGTQNAT 456
>M.Javanica_Scaff5586g040121 on XP_821669 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 879
Score = 25.8 bits (55), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 21/47 (44%)
Query: 71 GPSSQNSNGKGPKNSSTIKKPESHKKSAKEVESDYGSDSEGSDFGGS 117
G S +S G S + P + K S KEV S SD + GGS
Sbjct: 760 GSSGADSGGASTSAVSAVSTPSAEKDSVKEVASGKSSDGAQTVDGGS 806
>M.Javanica_Scaff5586g040121 on XP_820143 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 869
Score = 25.8 bits (55), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 15/111 (13%)
Query: 9 LFIFHIWLILQVNCKGNG-------------KDKGKNLAS-EDVESTGGPSKWKVAQKAF 54
LF + L++ + C G+G K +G N E V+S G PS KV F
Sbjct: 43 LFYSAVLLLVVMVCCGSGAAGVAEEPAVSTFKWRGINEGGGETVDSLGAPSLLKVGSDVF 102
Query: 55 GRVLSLKKKDNVKSQGGPSSQNSNGKGPKN-SSTIKKPESHKKSAKEVESD 104
+ KK+ G +SQ + K ++KP+ K +E SD
Sbjct: 103 AVAEAQCKKNGGVDFTGVASQPLTTEAAKTPVEVLEKPKDWTKVLEEGASD 153
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5628g040306
(437 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351221 CTRP (Adhesin) [Plasmodium falciparum] 32 0.054
XP_001350409 PfEMP1 (Establishment) [Plasmodium falciparum] 30 0.23
XP_816001 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 9.2
>M.Javanica_Scaff5628g040306 on XP_001351221 CTRP (Adhesin) [Plasmodium falciparum]
Length = 2112
Score = 32.3 bits (72), Expect = 0.054, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 80 ILPTQSLPLTVPTPQPPPLIVPTPQ--PPPLIVPT--QQPLPLIVPAPQPLLPPVDPP 133
I T S+ L P P P+ P P+ P P+ PT + P P+ P P+ PV+ P
Sbjct: 491 ICNTGSVELPKPEENPEPVEKPNPEENPNPVEKPTPEENPNPVEKPTPEENPNPVEKP 548
Score = 30.4 bits (67), Expect = 0.24, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Query: 60 VSKFCEKINDFIQQKQPPPLILPTQSLPLTVPTPQ--PPPLIVPTPQ--PPPLIVPTQQP 115
++K KI + + P P P P+ P P+ P P+ PTP+ P P+ PT +
Sbjct: 484 ITKILTKICNTGSVELPKPEENPE---PVEKPNPEENPNPVEKPTPEENPNPVEKPTPEE 540
Query: 116 LPLIVPAPQPLLPP 129
P V P+P P
Sbjct: 541 NPNPVEKPEPEKNP 554
>M.Javanica_Scaff5628g040306 on XP_001350409 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2223
Score = 30.4 bits (67), Expect = 0.23, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 11/57 (19%)
Query: 91 PTPQPP-------PLIVPTPQPPPLIVPTQQPLPLIVPAPQPLLPPVDPPVLSVYVP 140
P P P P++ P + PP P Q P + PA P P DP +L +P
Sbjct: 1713 PEPTQPADGGEQTPVLKPEEEAPP---PAQAP-DVAPPARAPADQPFDPTILQTTIP 1765
>M.Javanica_Scaff5628g040306 on XP_816001 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 430
Score = 25.0 bits (53), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 88 LTVPTPQPPPLIVPTPQPPPLIVPTQQ 114
+T+P P+ P +V Q P +I P Q
Sbjct: 269 ITIPKPEDPKTLVVDTQSPAVIAPDVQ 295
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff745g009509
(104 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum] 22 9.8
>M.Javanica_Scaff745g009509 on XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3346
Score = 22.3 bits (46), Expect = 9.8, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 71 EDLERAKKMFAATGDEPKHNLDSIDDQQFVQ 101
E+ ++ K + D+ KHN D+I + F++
Sbjct: 1902 EEFDKQSKKYENEIDDVKHNSDNIYGKDFLE 1932
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff30159g097181
(289 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_821548 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.67
XP_810753 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.72
XP_804902 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.7
XP_827715 VSG (Establishment) [Trypanosoma brucei] 26 3.3
XP_811004 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 3.6
XP_811703 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.2
XP_827712 VSG (Establishment) [Trypanosoma brucei] 25 4.7
XP_812620 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 5.3
XP_813616 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 8.9
XP_001608795 variant erythrocyte surface antigen-1, alpha subun... 25 8.9
XP_810496 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 9.4
>M.Javanica_Scaff30159g097181 on XP_821548 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 958
Score = 28.1 bits (61), Expect = 0.67, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 6/92 (6%)
Query: 166 DNNENSASTTIPEEPKQNQQKNNFETTTILKNQ---IKEVVDLTKEENLTVKEKARPPQN 222
DNN N + E+ K N +++ + +L Q +KEV+ KE + V +
Sbjct: 493 DNNNNEKLIALYEKKKSNGEQSYGMVSVLLTAQLERVKEVLTTWKEVDERVSQLCTSLSA 552
Query: 223 LVGENDEE--DMMKIYTGLV-VEADNFGLILW 251
L G + ++ +KI GLV +DNF W
Sbjct: 553 LEGTSTDDACSTVKITDGLVGFLSDNFSDDTW 584
>M.Javanica_Scaff30159g097181 on XP_810753 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 955
Score = 28.1 bits (61), Expect = 0.72, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 6/92 (6%)
Query: 166 DNNENSASTTIPEEPKQNQQKNNFETTTILKNQ---IKEVVDLTKEENLTVKEKARPPQN 222
DNN N + E+ K N +++ + +L Q +KEV+ KE + V +
Sbjct: 490 DNNNNEKLIALYEKKKSNGEQSYGMVSVLLTAQLERVKEVLTTWKEVDERVSQLCTSLSA 549
Query: 223 LVGENDEE--DMMKIYTGLV-VEADNFGLILW 251
L G + ++ +KI GLV +DNF W
Sbjct: 550 LEGTSTDDACSTVKITDGLVGFLSDNFSDDTW 581
>M.Javanica_Scaff30159g097181 on XP_804902 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1042
Score = 26.9 bits (58), Expect = 1.7, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 187 NNFETTTILKNQIKEVVDLTKEENLTVKEKARPPQNLVGENDEEDMMKIYTGLVVEADNF 246
NNF TT +L+ V + + + + + +R Q + G N E + + G V E +
Sbjct: 162 NNFGTTELLR---PTTVVIGESVYMLLGKYSRTKQQIQGTN--ERGLLLVKGTVAEENGK 216
Query: 247 GLILWNKTH 255
I WN+TH
Sbjct: 217 KKIRWNETH 225
>M.Javanica_Scaff30159g097181 on XP_827715 VSG (Establishment) [Trypanosoma brucei]
Length = 473
Score = 25.8 bits (55), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/83 (21%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 98 GIEHSRKNSSISPEKSNPKLVHSPLNLFDEGSNDEEDTAAIKQKEPPTSNKKNIFRLDDD 157
G + R+ S++PE S P+ P + + E ++++ P ++ + +
Sbjct: 373 GGQRGRQKRSVNPENSVPETPADPSDPTQSVPHTNEKKRSVRK--PISTGNGATKSYNSE 430
Query: 158 DDDNKKIFDNNENSASTTIPEEP 180
+DD+ + ENSA + P +P
Sbjct: 431 EDDSYEYECEGENSACSDSPAKP 453
>M.Javanica_Scaff30159g097181 on XP_811004 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 933
Score = 25.8 bits (55), Expect = 3.6, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Query: 166 DNNENSASTTIPEEPKQNQQKNNFETTTILKNQIKEVVDL--TKEENLTVKEKARPPQNL 223
D +N T+P PK+NQ++N + +VD+ E V A +++
Sbjct: 362 DEKKNVMLVTLPVYPKENQKENKKGELHLWLTDNTHIVDIGPVSGEGEDVAASALLHKSV 421
Query: 224 VGENDEE 230
GE +EE
Sbjct: 422 EGETNEE 428
>M.Javanica_Scaff30159g097181 on XP_811703 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1043
Score = 25.4 bits (54), Expect = 4.2, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 187 NNFETTTILKNQIKEVVDLTKEENLTVKEKARPPQNLVGENDEEDMMKIYTGLVVEADNF 246
NNF TT +L+ + + + + + +R Q + G N E + + G V E +
Sbjct: 163 NNFGTTELLR---PTTLVIGESVYMLLGNYSRKKQQIQGTN--EPGLLLVKGTVAEENGK 217
Query: 247 GLILWNKTH 255
I WN+TH
Sbjct: 218 KKIRWNETH 226
>M.Javanica_Scaff30159g097181 on XP_827712 VSG (Establishment) [Trypanosoma brucei]
Length = 474
Score = 25.4 bits (54), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/83 (21%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 98 GIEHSRKNSSISPEKSNPKLVHSPLNLFDEGSNDEEDTAAIKQKEPPTSNKKNIFRLDDD 157
G + R+ S++PE S P+ P + + E ++++ P ++ + +
Sbjct: 374 GGQRGRQKRSVNPENSVPETPADPSDPTQSVPHTNEKKRSVRK--PISTGNGATKSYNSE 431
Query: 158 DDDNKKIFDNNENSASTTIPEEP 180
+DD+ + ENSA + P +P
Sbjct: 432 EDDSYEYECEGENSACSDSPAKP 454
>M.Javanica_Scaff30159g097181 on XP_812620 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1042
Score = 25.4 bits (54), Expect = 5.3, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 49/122 (40%), Gaps = 33/122 (27%)
Query: 183 NQQKNNFETTTILKNQIKEVVDLTKEENLTVKEKAR-PPQNLVGENDEEDMMKIYTGLVV 241
N N+F TT +L+ + L + + +R PQ V +E ++ + + V
Sbjct: 160 NTAANSFGTTELLR---PTTLVLGDSVYMLLGNYSRTKPQ--VERTNERGLLLVKGTVAV 214
Query: 242 EADNFGLILWNKTHDLVRAPG--------------------------LPLIGLDKRGTAF 275
E+ N ++WN+TH LV+ G P+ DK GT+F
Sbjct: 215 ESGNNKKLVWNETH-LVKPQGKGKSVFLTEFLGGGGSGAVLRDGSLVFPMQAKDKDGTSF 273
Query: 276 LL 277
LL
Sbjct: 274 LL 275
>M.Javanica_Scaff30159g097181 on XP_813616 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1038
Score = 24.6 bits (52), Expect = 8.9, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 186 KNNFETTTILKNQIKEVVDLTKEENLTVKEKARPPQNLVGENDEEDMMKIYTGLVVEADN 245
+NNF TT +L+ + D + V + + + + G+N E ++ + + V+ N
Sbjct: 162 ENNFWTTELLRPTTLVIEDSVY---MLVGKYSHTEKQVEGKN-ERGLLLVKGTVTVDGGN 217
Query: 246 FGLILWNKTH 255
++WN+TH
Sbjct: 218 NKKLVWNETH 227
>M.Javanica_Scaff30159g097181 on XP_001608795 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1323
Score = 24.6 bits (52), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 100 EHSRKNSSISPEKSNPKLVHSPLNLFDEGSNDEEDTAAIKQKEPPTSN 147
+ KN S EK +P+L H L+ N ++++ Q + P +N
Sbjct: 1189 QEGEKNGDYSIEKKDPRLCHQFLDSLSAVINKKKESEQKDQDKHPLTN 1236
>M.Javanica_Scaff30159g097181 on XP_810496 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 943
Score = 24.6 bits (52), Expect = 9.4, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 166 DNNENSASTTIPEEPKQNQQKNNFETTTILKNQIKEVVDL 205
+++ N T+P PK+NQ++N + K +VD+
Sbjct: 371 EDDRNVMLVTLPVYPKENQKENKKGELHLWLTDNKHIVDI 410
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6678g044991
(61 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff354g005261
(88 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349207 EBA-175 (Adhesin) [Plasmodium falciparum] 22 8.7
>M.Javanica_Scaff354g005261 on XP_001349207 EBA-175 (Adhesin) [Plasmodium falciparum]
Length = 1462
Score = 21.9 bits (45), Expect = 8.7, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Query: 32 LQVESFRFKNSSYGR--CKESSSGHCHHQSRQD 62
LQ F N+ +G + S H HH +RQD
Sbjct: 1260 LQKHGFHTMNNLHGDGVSERSQINHSHHGNRQD 1292
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2569g023816
(79 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_626924 Hsp90 (Heat shock protein) [Cryptosporidium parvum] 25 0.39
XP_819490 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.1
XP_807448 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.2
XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum] 24 1.2
XP_843647 VSG (Establishment) [Trypanosoma brucei] 23 2.0
XP_817637 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.5
XP_814818 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.2
XP_816886 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.4
XP_001611901 variant erythrocyte surface antigen-1, alpha subun... 22 6.1
>M.Javanica_Scaff2569g023816 on XP_626924 Hsp90 (Heat shock protein) [Cryptosporidium parvum]
Length = 255
Score = 25.4 bits (54), Expect = 0.39, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 21/46 (45%)
Query: 29 SGGGDVLDDNDGEDVGAEPNLGQNQQAVQHFDPNQVNFSLNVPDSG 74
S D LD E + L N++ P++VN +L + DSG
Sbjct: 47 SNASDALDKIRYESLTDPEQLKSNEEMHIRIIPDKVNNTLTIEDSG 92
>M.Javanica_Scaff2569g023816 on XP_819490 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 997
Score = 24.3 bits (51), Expect = 1.1, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 34 VLDDNDGEDVGAEPNLGQNQQAVQHFDPNQVNFSLNVPDSG 74
++++ DGEDVG P Q P++ N +L + D+G
Sbjct: 915 LVENGDGEDVGTAPGNASTQPGKNKI-PSESNATL-LSDTG 953
>M.Javanica_Scaff2569g023816 on XP_807448 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 831
Score = 23.9 bits (50), Expect = 1.2, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 5/56 (8%)
Query: 27 GCSGGGDVLDDNDGEDVGAEPNLGQNQQAV---QHFDPNQVNFSLNVPDSGNCTRN 79
GC G G V+D DG V G++ +V HF ++ + L+ GN R+
Sbjct: 246 GCGGSGAVMD--DGTLVFPMQAKGKDGTSVLLSMHFSKSENKWELSSTTPGNGCRD 299
>M.Javanica_Scaff2569g023816 on XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2980
Score = 23.9 bits (50), Expect = 1.2, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 28 CSGGGDVLDDNDGEDVGAEPNL 49
CSG G+ DD GED P+L
Sbjct: 2051 CSGYGEDCDDQLGEDPSTVPSL 2072
>M.Javanica_Scaff2569g023816 on XP_843647 VSG (Establishment) [Trypanosoma brucei]
Length = 543
Score = 23.5 bits (49), Expect = 2.0, Method: Composition-based stats.
Identities = 9/14 (64%), Positives = 11/14 (78%)
Query: 47 PNLGQNQQAVQHFD 60
PN GQNQQ V+ +D
Sbjct: 276 PNKGQNQQYVRLWD 289
>M.Javanica_Scaff2569g023816 on XP_817637 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 986
Score = 22.7 bits (47), Expect = 3.5, Method: Composition-based stats.
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 34 VLDDNDGEDVGAEPNLGQNQ 53
++++ DGEDVG P Q
Sbjct: 904 LVENGDGEDVGTAPGNASTQ 923
>M.Javanica_Scaff2569g023816 on XP_814818 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 836
Score = 22.3 bits (46), Expect = 5.2, Method: Composition-based stats.
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 28 CSGGGDVLDDNDGEDVGAEPNLGQNQ 53
C G D DNDGE+ ++ Q +
Sbjct: 682 CFGACDFDGDNDGEEEDSQKEASQKE 707
>M.Javanica_Scaff2569g023816 on XP_816886 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 905
Score = 22.3 bits (46), Expect = 5.4, Method: Composition-based stats.
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 34 VLDDNDGEDVGAEP 47
++++ DGEDVG P
Sbjct: 823 LVENGDGEDVGTAP 836
>M.Javanica_Scaff2569g023816 on XP_001611901 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1211
Score = 21.9 bits (45), Expect = 6.1, Method: Composition-based stats.
Identities = 14/26 (53%), Positives = 14/26 (53%), Gaps = 4/26 (15%)
Query: 25 GCG-CSGGGDVLDDNDGED---VGAE 46
GC CSGGG DGED VG E
Sbjct: 190 GCTRCSGGGSDCTCKDGEDQCAVGTE 215
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff5548g039956
(65 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_805130 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.15
XP_804139 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.15
XP_818662 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.6
XP_817493 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.7
>M.Javanica_Scaff5548g039956 on XP_805130 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 352
Score = 25.8 bits (55), Expect = 0.15, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 12/45 (26%)
Query: 2 FYNFLIFLLILFSIPFIIGADNCLYKCR--DGKENLVDGRSDFKG 44
+NF+I LL++ ++ C CR KEN DG SD +G
Sbjct: 43 LFNFVILLLLVTTM--------CCATCRATPAKEN--DGNSDLRG 77
>M.Javanica_Scaff5548g039956 on XP_804139 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 793
Score = 25.8 bits (55), Expect = 0.15, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 12/45 (26%)
Query: 2 FYNFLIFLLILFSIPFIIGADNCLYKCR--DGKENLVDGRSDFKG 44
+NF+I LL++ ++ C CR KEN DG SD +G
Sbjct: 43 LFNFVILLLLVTTM--------CCATCRATPAKEN--DGNSDLRG 77
>M.Javanica_Scaff5548g039956 on XP_818662 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1038
Score = 23.1 bits (48), Expect = 1.6, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 13/33 (39%), Gaps = 2/33 (6%)
Query: 22 DNCLYKCRDGKENLVDGRSDFKGWGGGNLEQGG 54
D+ LY CR VD R KG G G
Sbjct: 462 DSALYSCRSASSGTVDARK--KGICNGTFPTKG 492
>M.Javanica_Scaff5548g039956 on XP_817493 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 765
Score = 23.1 bits (48), Expect = 1.7, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 10 LILFSIPFIIGADNCLYKCRDGKENLVDGRSDFKGWGGGNLE 51
+ L+S P +G + K D KE+ D KG G G+ E
Sbjct: 678 VFLYSRPLSVGELKMIKKVEDKKESGDGDGEDKKGSGDGDGE 719
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6104g042469
(436 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAR88085 TbcatB (Cysteine proteases) [Trypanosoma brucei] 145 6e-41
P92132 CP2 (Cysteine protease) [Giardia duodenalis] 92 5e-22
CAC67416 Brucipain (Cysteine proteases) [Trypanosoma brucei] 78 2e-16
XP_001347833 Falcipain 3 (Cysteine protease) [Plasmodium falc... 73 5e-15
PF14_0553 Falcipain1 (Cysteine protease) [Plasmodium falciparum] 73 1e-14
AAX77225 Falcipain 2' (Cysteine protease) [Plasmodium falcipa... 72 2e-14
ABC02174 Falstatin (Others) [Plasmodium falciparum] 69 2e-13
XP_001347836 Falcipain 2 (Cysteine protease) [Plasmodium falc... 69 2e-13
XP_650937 CP5 (Cysteine protease) [Entamoeba histolytica] 61 3e-11
CAA38278 Cruzipain (Cysteine protease) [Trypanosoma cruzi] 47 2e-08
XP_650156 CP1 (Cysteine protease) [Entamoeba histolytica] 51 5e-08
EAN83733 Cruzipain (Cysteine protease) [Trypanosoma cruzi] 46 6e-08
AAS38514 CP65 (Cysteine protease) [Trichomonas vaginalis] 48 2e-07
AAV98582 CP4 (Cysteine protease) [Trichomonas vaginalis] 47 1e-06
CAA54438 CP1 (Cysteine protease) [Trichomonas vaginalis] 46 1e-06
CAA54436 CP2 (Cysteine protease) [Trichomonas vaginalis] 45 3e-06
BAA96736 Cruzipain (Cysteine protease) [Trypanosoma cruzi] 40 9e-06
BAA96737 Cruzipain (Cysteine protease) [Trypanosoma cruzi] 39 2e-05
XP_650642 CP2 (Cysteine protease) [Entamoeba histolytica] 42 4e-05
CAA54437 CP3 (Cysteine protease) [Trichomonas vaginalis] 39 4e-04
CAJ20707 Toxopain-2 (Protease) [Toxoplasma gondii] 35 0.007
EAN82385 Cruzipain (Cysteine protease) [Trypanosoma cruzi] 31 0.017
XP_001609751 variant erythrocyte surface antigen-1, alpha subun... 29 0.70
XP_001609666 variant erythrocyte surface antigen-1, alpha subun... 26 4.9
XP_001609315 variant erythrocyte surface antigen-1, alpha subun... 26 5.5
XP_804096 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 9.4
>M.Javanica_Scaff6104g042469 on AAR88085 TbcatB (Cysteine proteases) [Trypanosoma brucei]
Length = 340
Score = 145 bits (366), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 160/357 (44%), Gaps = 73/357 (20%)
Query: 92 VFEINTLTGGEWTAKLN-LVSLLPLEAQKRLCGTLGVEANGNNDGPPRNKRGSLRAKRAD 150
V +N L G W AK + ++ + L KRL G ++ N N P+ + A+
Sbjct: 37 VDRVNRLNRGIWKAKYDGVMQNITLREAKRLNGV--IKKNNNASILPKRRFTEEEARAPL 94
Query: 151 SCSYKIDFDVRNRWPRCRSIISYVQDQGQCGSCWAVSTASCYTDRRCIERAKRRLRTPNN 210
S FD WP C +I + DQ CGSCWAV+ AS +DR C + +
Sbjct: 95 PSS----FDSAEAWPNCPTIPQ-IADQSACGSCWAVAAASAMSDRFCTMGGVQDVH---- 145
Query: 211 ARNTFSAYDLVSCSKE--DGCNGGVTNEVWRWIQKNGICTGTDHPRNGGCKPYPFA---- 264
SA DL++C + DGCNGG + W + G+ + C+PYPF
Sbjct: 146 ----ISAGDLLACCSDCGDGCNGGDPDRAWAYFSSTGLVSDY-------CQPYPFPHCSH 194
Query: 265 -PTNKDPIPESCSE------SCTKTLWRPTYPTDRKHNGTYISRRSGGRITSYNALTSVG 317
+K+ P CS+ C T PT P + +Y + TS
Sbjct: 195 HSKSKNGYPP-CSQFNFDTPKCNYTCDDPTIP-----------------VVNYRSWTSY- 235
Query: 318 AVVGEAAIKNQLHTYGPVVACFIVYEDFDSYNDGVYRVTKNYLFTKLFSIQRVSNNSLGG 377
A+ GE +L GP F VYEDF +YN GVY VS LGG
Sbjct: 236 ALQGEDDYMRELFFRGPFEVAFDVYEDFIAYNSGVY--------------HHVSGQYLGG 281
Query: 378 HAVVITGYGTATCSGTIIPFWIIRNSWSPKWGKGGFFYMRRGTNECEIEKYISYGVP 434
HAV + G+GT+ +P+W I NSW+ +WG G+F +RRG++EC IE S G+P
Sbjct: 282 HAVRLVGWGTSN----GVPYWKIANSWNTEWGMDGYFLIRRGSSECGIEDGGSAGIP 334
>M.Javanica_Scaff6104g042469 on P92132 CP2 (Cysteine protease) [Giardia duodenalis]
Length = 255
Score = 91.7 bits (226), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 104/253 (41%), Gaps = 59/253 (23%)
Query: 138 RNKRGSL-RAKRADSCSYKIDFDVRNRWPRCRSIISYVQDQGQCGSCWAVSTASCYTDRR 196
+N +G+ R D FD R +P C I V DQG CGSCWA S+ + + DRR
Sbjct: 58 KNAKGAAPRGTFTDKDDVPESFDFREEYPHC---IPEVVDQGGCGSCWAFSSVATFGDRR 114
Query: 197 CIERAKRRLRTPNNARNTFSAYDLVSCSKED-GCNGGVTNEVWRWIQKNGICTGTDHPRN 255
C+ ++ +S +VSC D CNGG VW+++ K G T TD
Sbjct: 115 CVAGLDKK-------PVKYSPQYVVSCDHGDMACNGGWLPNVWKFLTKTG--TTTDE--- 162
Query: 256 GGCKPYPFAPTN-KDPIPESCSESCTKTLWRPTYPTDRKHNGTYISRRSGGRITSYNALT 314
C PY T + P C++ +K H T S + G
Sbjct: 163 --CVPYKSGSTTLRGTCPTKCADGSSKV-----------HLATATSYKDYG--------- 200
Query: 315 SVGAVVGEAAIKNQLHTYGPVVACFIVYEDFDSYNDGVYRVTKNYLFTKLFSIQRVSNNS 374
+ A+ L T GP+ F+V+ DF Y GVY+ T Y+
Sbjct: 201 -----LDIPAMMKALSTSGPLQVAFLVHSDFMYYESGVYQHTYGYM-------------- 241
Query: 375 LGGHAVVITGYGT 387
GGHAV + GYGT
Sbjct: 242 EGGHAVEMVGYGT 254
>M.Javanica_Scaff6104g042469 on CAC67416 Brucipain (Cysteine proteases) [Trypanosoma brucei]
Length = 450
Score = 77.8 bits (190), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 110/270 (40%), Gaps = 66/270 (24%)
Query: 166 RCRSIISYVQDQGQCGSCWAVSTASCYTDRRCIERAKRRLRTPNNARNTFSAYDLVSCSK 225
R + ++ V+DQGQCGSCWA ST I + + + N + S LVSC
Sbjct: 133 REKGAVTPVKDQGQCGSCWAFST---------IGNIEGQWQVAGNPLVSLSEQMLVSCDT 183
Query: 226 ED-GCNGGVTNEVWRWI-QKNGICTGTDHPRNGGCKPYPFAPTNKDPIPESCSESCTKTL 283
D GC GG+ + + WI NG T+ YP+ N + C
Sbjct: 184 IDFGCGGGLMDNAFNWIVNSNGGNVFTE-------ASYPYVSGNGE------QPQC---- 226
Query: 284 WRPTYPTDRKHNGTYISRRSGGRITSYNALTSVGAVVGEAAIKNQLHTYGPVVACFIVYE 343
+ NG I G IT + L E AI L GP+ A +
Sbjct: 227 ---------QMNGHEI----GAAITDHVDLPQ-----DEDAIAAYLAENGPL-AIAVDAT 267
Query: 344 DFDSYNDGVYRVTKNYLFTKLFSIQRVSNNSLGGHAVVITGYGTATCSGTIIPFWIIRNS 403
F YN G+ T S Q H V++ GY ++ P+WII+NS
Sbjct: 268 SFMDYNGGI--------LTSCTSEQL-------DHGVLLVGYNDSSNP----PYWIIKNS 308
Query: 404 WSPKWGKGGFFYMRRGTNECEIEKYISYGV 433
WS WG+ G+ + +GTN+C + + +S V
Sbjct: 309 WSNMWGEDGYIRIEKGTNQCLMNQAVSSAV 338
>M.Javanica_Scaff6104g042469 on XP_001347833 Falcipain 3 (Cysteine protease) [Plasmodium
falciparum]
Length = 482
Score = 73.2 bits (178), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 123/326 (37%), Gaps = 94/326 (28%)
Query: 98 LTGGEWTAK-LNLVSLLPLEAQKRLCGTLGVEANGNNDGPPRNKRGSLRAKRADSCSYKI 156
LT E+ +K L L S PL+ K L + N D + +G+ + D +Y
Sbjct: 215 LTYHEFKSKYLTLRSSKPLKNSKYLLDQI------NYDAVIKKYKGN---ENFDHAAYD- 264
Query: 157 DFDVRNRWPRCRSIISYVQDQGQCGSCWAVSTASCYTDRRCIERAKRRLRTPNNARNTFS 216
W R S ++ V+DQ CGSCWA S+ + I + N T S
Sbjct: 265 -------W-RLHSGVTPVKDQKNCGSCWAFSSIGSVESQYAIRK---------NKLITLS 307
Query: 217 AYDLVSCS-KEDGCNGGVTNEVWR-WIQKNGICTGTDHPRNGGCKPYPFAPTNKDPIPES 274
+LV CS K GCNGG+ N + I+ GICT D+P P
Sbjct: 308 EQELVDCSFKNYGCNGGLINNAFEDMIELGGICTDDDYPYVSDA-------------PNL 354
Query: 275 CS-ESCTKTLWRPTYPTDRKHNGTYISRRSGGRITSYNALTSVGAVVGEAAIKNQLHTYG 333
C+ + CT+ Y + V + +K L G
Sbjct: 355 CNIDRCTEKYGIKNYLS-----------------------------VPDNKLKEALRFLG 385
Query: 334 PVVACFIVYEDFDSYNDGVYRVTKNYLFTKLFSIQRVSNNSLGGHAVVITGYGTA----- 388
P+ V +DF Y +G++ + L HAV++ G+G
Sbjct: 386 PISISIAVSDDFPFYKEGIF--------------DGECGDEL-NHAVMLVGFGMKEIVNP 430
Query: 389 -TCSGTIIPFWIIRNSWSPKWGKGGF 413
T G ++II+NSW +WG+ GF
Sbjct: 431 LTKKGEKHYYYIIKNSWGQQWGERGF 456
>M.Javanica_Scaff6104g042469 on PF14_0553 Falcipain1 (Cysteine protease) [Plasmodium falciparum]
Length = 569
Score = 72.8 bits (177), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 105/263 (39%), Gaps = 57/263 (21%)
Query: 166 RCRSIISYVQDQGQCGSCWAVSTASCYTDRRCIERAKRRLRTPNNARNTFSAYDLVSCSK 225
R + I+ +DQG CGSCWA ++ + N +FS ++V CSK
Sbjct: 340 REKGIVHEPKDQGLCGSCWAFASVG---------NIESVFAKKNKNILSFSEQEVVDCSK 390
Query: 226 ED-GCNGGVTNEVWRWIQKNGICTGTDHPRNGGCKPYPFAPTNKDPIPESCSESCTKTLW 284
++ GC+GG + ++ +N +C G ++ KD ++
Sbjct: 391 DNFGCDGGHPFYSFLYVLQNELCLGDEYKYKA-----------KDD------------MF 427
Query: 285 RPTYPTDRKHNGTYISRRSGGRITSYNALTSVGAVVGEAAIKNQLHTYGPVVACFIVYED 344
Y RK +L+S+GAV E + L+ GP+ V D
Sbjct: 428 CLNYRCKRKV-----------------SLSSIGAV-KENQLILALNEVGPLSVNVGVNND 469
Query: 345 FDSYNDGVY------RVTKNYLFTKLFSIQRVSNNSLGGHAVVITGYGTATCSGTIIPFW 398
F +Y++GVY + + L +++ N T + II +W
Sbjct: 470 FVAYSEGVYNGTCSEELNHSVLLVGYGQVEKTKLNYNNKIQTYNTKENSNQPDDNIIYYW 529
Query: 399 IIRNSWSPKWGKGGFFYMRRGTN 421
II+NSWS KWG+ GF + R N
Sbjct: 530 IIKNSWSKKWGENGFMRLSRNKN 552
>M.Javanica_Scaff6104g042469 on AAX77225 Falcipain 2' (Cysteine protease) [Plasmodium
falciparum]
Length = 484
Score = 71.6 bits (174), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 97/260 (37%), Gaps = 81/260 (31%)
Query: 166 RCRSIISYVQDQGQCGSCWAVSTASCYTDRRCIERAKRRLRTPNNARNTFSAYDLVSCS- 224
R S ++ V+DQ CGSCWA S+ + I + N T S +LV CS
Sbjct: 268 RLHSGVTPVKDQKNCGSCWAFSSIGSVESQYAIRK---------NKLITLSEQELVDCSF 318
Query: 225 KEDGCNGGVTNEVWR-WIQKNGICTGTDHPRNGGCKPYPFAPTNKDPIPESCS-ESCTKT 282
K GCNGG+ N + I+ GICT D+P P C+ + CT+
Sbjct: 319 KNYGCNGGLINNAFEDMIELGGICTDDDYPYVSDA-------------PNLCNIDRCTEK 365
Query: 283 LWRPTYPTDRKHNGTYISRRSGGRITSYNALTSVGAVVGEAAIKNQLHTYGPVVACFIVY 342
Y + V + +K L GP+ V
Sbjct: 366 YGIKNYLS-----------------------------VPDNKLKEALRFLGPISISVAVS 396
Query: 343 EDFDSYNDGVYRVTKNYLFTKLFSIQRVSNNSLG---GHAVVITGYGTA------TCSGT 393
+DF Y +G++ + G HAV++ G+G T G
Sbjct: 397 DDFAFYKEGIF------------------DGECGDQLNHAVMLVGFGMKEIVNPLTKKGE 438
Query: 394 IIPFWIIRNSWSPKWGKGGF 413
++II+NSW +WG+ GF
Sbjct: 439 KHYYYIIKNSWGQQWGERGF 458
>M.Javanica_Scaff6104g042469 on ABC02174 Falstatin (Others) [Plasmodium falciparum]
Length = 492
Score = 68.9 bits (167), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 146/399 (36%), Gaps = 99/399 (24%)
Query: 47 SLRNLLTPKFNLNDEELKDLAEKLGELAKLGYTITQEELQKRV-------QQVFEINTLT 99
S NL KF +++ E +L + Y T EE+QKR +++ N T
Sbjct: 151 SYSNLFDTKFLMDNLETVNLFYIFLKENNKKYE-TSEEMQKRFIIFSENYRKIELHNKKT 209
Query: 100 GGEWTAKLNLVSLLPLEAQKRLCGTLGVEANGNNDGPPRNKRGSL-----RAKRADSCSY 154
+ +N L E + L PP + + + K AD+
Sbjct: 210 NSLYKRGMNKFGDLSPEEFRSKYLNLKTHGPFKTLSPPVSYEANYEDVIKKYKPADAKLD 269
Query: 155 KIDFDVRNRWPRCRSIISYVQDQGQCGSCWAVSTASCYTDRRCIERAKRRLRTPNNARNT 214
+I +D W R ++ V+DQ CGSCWA S+ + I + L
Sbjct: 270 RIAYD----W-RLHGGVTPVKDQALCGSCWAFSSVGSVESQYAIRKKALFL--------- 315
Query: 215 FSAYDLVSCS-KEDGCNGG-VTNEVWRWIQKNGICTGTDHPRNGGCKPYPFAPTNKDPIP 272
FS +LV CS K +GC GG +TN I G+C+ D YP+ +P
Sbjct: 316 FSEQELVDCSVKNNGCYGGYITNAFDDMIDLGGLCSQDD---------YPYVSN----LP 362
Query: 273 ESCS-ESCTKTLWRPTYPTDRKHNGTYISRRSGGRITSYNALTSVGAVVGEAAIKNQLHT 331
E+C+ + C +R +Y+S + + K L
Sbjct: 363 ETCNLKRC----------NERYTIKSYVS-------------------IPDDKFKEALRY 393
Query: 332 YGPVVACFIVYEDFDSYNDGVYRVTKNYLFTKLFSIQRVSNNSLGG---HAVVITGYGTA 388
GP+ +DF Y G Y + G HAV++ GYG
Sbjct: 394 LGPISISIAASDDFAFYRGGFY------------------DGECGAAPNHAVILVGYGMK 435
Query: 389 TC----SGTIIPF--WIIRNSWSPKWGKGGFFYMRRGTN 421
+G + F +II+NSW WG+GG+ + N
Sbjct: 436 DIYNEDTGRMEKFYYYIIKNSWGSDWGEGGYINLETDEN 474
>M.Javanica_Scaff6104g042469 on XP_001347836 Falcipain 2 (Cysteine protease) [Plasmodium
falciparum]
Length = 492
Score = 68.9 bits (167), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 146/399 (36%), Gaps = 99/399 (24%)
Query: 47 SLRNLLTPKFNLNDEELKDLAEKLGELAKLGYTITQEELQKRV-------QQVFEINTLT 99
S NL KF +++ E +L + Y T EE+QKR +++ N T
Sbjct: 151 SYSNLFDTKFLMDNLETVNLFYIFLKENNKKYE-TSEEMQKRFIIFSENYRKIELHNKKT 209
Query: 100 GGEWTAKLNLVSLLPLEAQKRLCGTLGVEANGNNDGPPRNKRGSL-----RAKRADSCSY 154
+ +N L E + L PP + + + K AD+
Sbjct: 210 NSLYKRGMNKFGDLSPEEFRSKYLNLKTHGPFKTLSPPVSYEANYEDVIKKYKPADAKLD 269
Query: 155 KIDFDVRNRWPRCRSIISYVQDQGQCGSCWAVSTASCYTDRRCIERAKRRLRTPNNARNT 214
+I +D W R ++ V+DQ CGSCWA S+ + I + L
Sbjct: 270 RIAYD----W-RLHGGVTPVKDQALCGSCWAFSSVGSVESQYAIRKKALFL--------- 315
Query: 215 FSAYDLVSCS-KEDGCNGG-VTNEVWRWIQKNGICTGTDHPRNGGCKPYPFAPTNKDPIP 272
FS +LV CS K +GC GG +TN I G+C+ D YP+ +P
Sbjct: 316 FSEQELVDCSVKNNGCYGGYITNAFDDMIDLGGLCSQDD---------YPYVSN----LP 362
Query: 273 ESCS-ESCTKTLWRPTYPTDRKHNGTYISRRSGGRITSYNALTSVGAVVGEAAIKNQLHT 331
E+C+ + C +R +Y+S + + K L
Sbjct: 363 ETCNLKRC----------NERYTIKSYVS-------------------IPDDKFKEALRY 393
Query: 332 YGPVVACFIVYEDFDSYNDGVYRVTKNYLFTKLFSIQRVSNNSLGG---HAVVITGYGTA 388
GP+ +DF Y G Y + G HAV++ GYG
Sbjct: 394 LGPISISIAASDDFAFYRGGFY------------------DGECGAAPNHAVILVGYGMK 435
Query: 389 TC----SGTIIPF--WIIRNSWSPKWGKGGFFYMRRGTN 421
+G + F +II+NSW WG+GG+ + N
Sbjct: 436 DIYNEDTGRMEKFYYYIIKNSWGSDWGEGGYINLETDEN 474
>M.Javanica_Scaff6104g042469 on XP_650937 CP5 (Cysteine protease) [Entamoeba histolytica]
Length = 318
Score = 61.2 bits (147), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 114/299 (38%), Gaps = 81/299 (27%)
Query: 150 DSCSYKIDFDVRNRWP-----RCRSIISYVQDQGQCGSCWAVSTASCYTDRRCIERAKRR 204
D +I +D R P R + + ++DQ CGSC++ ++ + R + +K+
Sbjct: 81 DKQHEEIVYDSRGDVPESVDWRAKGKVPAIRDQASCGSCYSFASVAAIEGRLLVAGSKKF 140
Query: 205 LRTPNNARNTFSAYDLVSCSKE---DGCNGGVTNEVWRWIQKNGICTGTDHPRNGGCKPY 261
+ S LV CS GCNGG +R+++ NGI D Y
Sbjct: 141 TVDDLD----LSEQQLVDCSVSVGNKGCNGGSLLLSFRYVKLNGIMQEKD---------Y 187
Query: 262 PFAPTNKDPIPESCSESCTKTLWRPTYPTDRKHNGTYISRRSGGRITSYNALT------S 315
P+ + E+CT D+K I+ + R S AL
Sbjct: 188 PYV---------AAEETCT---------YDKKKVAVKITGQKLVRPGSEKALMRAAAEGP 229
Query: 316 VGAVVGEAAIKNQLHTYGPVVACFIVYEDFDSYNDGVYRVTKNYLFTKLFSIQRVSNNSL 375
V A + + +K QL Y G+Y +K T+L
Sbjct: 230 VAAAIDASGVKFQL------------------YKSGIYN-SKECSSTQL----------- 259
Query: 376 GGHAVVITGYGTATCSGTIIPFWIIRNSWSPKWGKGGFFYMRRG-TNECEIEKYISYGV 433
H V + GYGT +GT +WI+RNSW WG G+ M R N+C I +Y V
Sbjct: 260 -NHGVAVVGYGTQ--NGT--EYWIVRNSWGTIWGDQGYVLMSRNKNNQCGIASGAAYPV 313
>M.Javanica_Scaff6104g042469 on CAA38278 Cruzipain (Cysteine protease) [Trypanosoma cruzi]
Length = 70
Score = 47.4 bits (111), Expect = 2e-08, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 29/39 (74%)
Query: 395 IPFWIIRNSWSPKWGKGGFFYMRRGTNECEIEKYISYGV 433
+P+WII+NSW+ +WG+ G+ + +G+N+C +++ S V
Sbjct: 3 VPYWIIKNSWTAQWGEDGYIRIAKGSNQCLVKEEASSAV 41
>M.Javanica_Scaff6104g042469 on XP_650156 CP1 (Cysteine protease) [Entamoeba histolytica]
Length = 315
Score = 50.8 bits (120), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 98/264 (37%), Gaps = 66/264 (25%)
Query: 166 RCRSIISYVQDQGQCGSCWAVSTASCYTDRRCIERAKRRLRTPNNARNTFSAYDLVSCSK 225
R + ++ ++DQG CGSC+ + + R IE+ ++ S +V C++
Sbjct: 101 RKKGKVTPIRDQGNCGSCYTFGSIAALEGRLLIEKG------GDSETLDLSEEHMVQCTR 154
Query: 226 ED---GCNGGVTNEVWRWIQKNGICTGTDHPRNGGCKPYPFAPTNKDPIPESCSESCTKT 282
ED GCNGG+ + V+ +I +NGI +D+P G +S S K
Sbjct: 155 EDGNNGCNGGLGSNVYNYIMENGIAKESDYPYTG---------------SDSTCRSDVKA 199
Query: 283 LWRPTYPTDRKHNGTYISRRSGGRITSYNALTSVGAVVGEAAIKNQLHTYGPVVACFIVY 342
+I SYN + V +AAI L V+
Sbjct: 200 F---------------------AKIKSYNRVARNNEVELKAAISQGLVD----VSIDASS 234
Query: 343 EDFDSYNDGVYRVTKNYLFTKLFSIQRVSNNSLG-GHAVVITGYGTATCSGTIIPFWIIR 401
F Y G Y + ++ NN H V GYG WI+R
Sbjct: 235 VQFQLYKSGAY------------TDKQCKNNYFALNHEVCAVGYGVVDGK----ECWIVR 278
Query: 402 NSWSPKWGKGGFFYMRRGTNECEI 425
NSW WG+ G+ M N C +
Sbjct: 279 NSWGTGWGEKGYINMVIEGNTCGV 302
>M.Javanica_Scaff6104g042469 on EAN83733 Cruzipain (Cysteine protease) [Trypanosoma cruzi]
Length = 70
Score = 46.2 bits (108), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 29/39 (74%)
Query: 395 IPFWIIRNSWSPKWGKGGFFYMRRGTNECEIEKYISYGV 433
+P WII+NSW+ +WG+ G+ + +G+N+C +++ +S V
Sbjct: 11 VPHWIIKNSWTTQWGEDGYIRIAKGSNQCLVKEAVSSAV 49
>M.Javanica_Scaff6104g042469 on AAS38514 CP65 (Cysteine protease) [Trichomonas vaginalis]
Length = 206
Score = 48.1 bits (113), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 92/243 (37%), Gaps = 68/243 (27%)
Query: 166 RCRSIISYVQDQGQCGSCWAVSTASCYTDRRCIERAKRRLRTPNNARNTFSAYDLVSCSK 225
R + +++ +QDQGQCGSCWA S I+ + + + S +LV C
Sbjct: 28 RSKGVVNPIQDQGQCGSCWAFSA---------IQAQESQYAITSGELQKLSEQNLVDCVT 78
Query: 226 E-DGCNGGVTNEVWRWIQKNGICTGTDHPRNGGCKPYPFAPTNKDPIPESCSESCTKTLW 284
DGC GG+ + ++ K ++G F N P T +
Sbjct: 79 TCDGCEGGLMTNAYDYVIK---------YQDG-----KFMLENDYPY--------TAYYY 116
Query: 285 RPTYPTDRKHNGTYISRRSGGRITSYNALTSVGAVVG-EAAIKNQLHTYGP-VVACFIVY 342
+ TD+ + N ++ + V G E + ++ T GP VA +
Sbjct: 117 DCLFDTDKAVS---------------NIVSYINVVEGDENDLATKISTNGPAAVAIDASH 161
Query: 343 EDFDSYNDGVYRVTKNYLFTKLFSIQRVSNNSLG-GHAVVITGYGTATCSGTIIPFWIIR 401
F Y+ G+Y V S +S G H V GYG + +WI++
Sbjct: 162 YSFQLYSQGIYNVP--------------SRSSYGLDHGVGCVGYGAEGST----KYWIVK 203
Query: 402 NSW 404
NSW
Sbjct: 204 NSW 206
>M.Javanica_Scaff6104g042469 on AAV98582 CP4 (Cysteine protease) [Trichomonas vaginalis]
Length = 255
Score = 46.6 bits (109), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 16/101 (15%)
Query: 166 RCRSIISYVQDQGQCGSCWAVSTASCYTDRRCIERAKRRLRTPNNARNTFSAYDLVSCSK 225
R + ++ ++DQGQCGSCWA S I+ + + + S +LV C
Sbjct: 95 RKKGAVNPIKDQGQCGSCWAFSA---------IQAQESQYYISFKTLQSLSEQNLVDCVT 145
Query: 226 E-DGCNGGVTNEVWRWI---QKNGICTGTDHP---RNGGCK 259
GCNGG+ + + ++ Q T D+P R+G CK
Sbjct: 146 TCYGCNGGLMDAAYDYVVKHQSGKFMTEADYPYTARDGSCK 186
>M.Javanica_Scaff6104g042469 on CAA54438 CP1 (Cysteine protease) [Trichomonas vaginalis]
Length = 255
Score = 45.8 bits (107), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 16/101 (15%)
Query: 166 RCRSIISYVQDQGQCGSCWAVSTASCYTDRRCIERAKRRLRTPNNARNTFSAYDLVSCSK 225
R + ++ ++DQGQCGSCWA S I+ + + + S +LV C
Sbjct: 82 RKKGAVNPIKDQGQCGSCWAFSA---------IQAQESQYYISFKTLQSLSEQNLVDCVT 132
Query: 226 E-DGCNGGVTNEVWRWI---QKNGICTGTDHP---RNGGCK 259
GCNGG+ + + ++ Q T D+P R+G CK
Sbjct: 133 TCYGCNGGLMDAAYDYVVKHQSGKFMTEADYPYTARDGSCK 173
>M.Javanica_Scaff6104g042469 on CAA54436 CP2 (Cysteine protease) [Trichomonas vaginalis]
Length = 255
Score = 45.1 bits (105), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 16/101 (15%)
Query: 166 RCRSIISYVQDQGQCGSCWAVSTASCYTDRRCIERAKRRLRTPNNARNTFSAYDLVSCSK 225
R + I++ ++DQGQCGSCWA S I+ ++ R N + ++V C
Sbjct: 106 RDKGIVNKIKDQGQCGSCWAFSA---------IQASESRYAQANKQLLDLAEQNIVDCVT 156
Query: 226 E-DGCNGGVTNEVWRWI---QKNGICTGTDHP---RNGGCK 259
GCNGG ++ ++ Q D+P R+G CK
Sbjct: 157 SCYGCNGGWPSKAIDYVVKHQAGKFMLTADYPYTARDGTCK 197
>M.Javanica_Scaff6104g042469 on BAA96736 Cruzipain (Cysteine protease) [Trypanosoma cruzi]
Length = 70
Score = 40.4 bits (93), Expect = 9e-06, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 33/71 (46%), Gaps = 12/71 (16%)
Query: 178 GQCGSCWAVSTASCYTDRRCIERAKRRLRTPNNARNTFSAYDLVSCSKED-GCNGGVTNE 236
GQCGSCWA S I + + + S LVSC K D GC+GG+ N
Sbjct: 1 GQCGSCWAFSA---------IGNVEGQWFLAGHPLTNLSEQMLVSCDKTDSGCSGGLMNN 51
Query: 237 VWRWI--QKNG 245
+ WI + NG
Sbjct: 52 AFEWIVQENNG 62
>M.Javanica_Scaff6104g042469 on BAA96737 Cruzipain (Cysteine protease) [Trypanosoma cruzi]
Length = 70
Score = 39.3 bits (90), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 32/71 (45%), Gaps = 12/71 (16%)
Query: 178 GQCGSCWAVSTASCYTDRRCIERAKRRLRTPNNARNTFSAYDLVSCSKED-GCNGGVTNE 236
GQCGSCWA S I + + + S LVSC K D GC GG+ N
Sbjct: 1 GQCGSCWAFSA---------IGNVECQWFLAGHPLTNLSEQMLVSCDKTDSGCGGGLMNN 51
Query: 237 VWRWI--QKNG 245
+ WI + NG
Sbjct: 52 AFEWIVQENNG 62
>M.Javanica_Scaff6104g042469 on XP_650642 CP2 (Cysteine protease) [Entamoeba histolytica]
Length = 315
Score = 42.0 bits (97), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 96/261 (36%), Gaps = 70/261 (26%)
Query: 171 ISYVQDQGQCGSCWAVSTASCYTDRRCIERAKRRLRTPNNARNT--FSAYDLVSCSKE-- 226
++ ++DQ QCGSC+ + + R IE+ NT S +V C+++
Sbjct: 106 VTPIRDQAQCGSCYTFGSLAALEGRLLIEKG--------GDANTLDLSEEHMVQCTRDNG 157
Query: 227 -DGCNGGVTNEVWRWIQKNGICTGTDHPRNGGCKPYPFAPTNKDPIPESCSESCTKTLWR 285
+GCNGG+ + V+ +I ++G+ +D+P G S+S KT
Sbjct: 158 NNGCNGGLGSNVYDYIIEHGVAKESDYPYTG-------------------SDSTCKT--- 195
Query: 286 PTYPTDRKHNGTYISRRSGGRITSYNALTSVGAVVGEAAIKNQLHTYGPVVACFIVYEDF 345
+ +S +IT Y + EA +K L V+ F
Sbjct: 196 --------------NVKSFAKITGYTKVPR----NNEAELKAALSQGLVDVSIDASSAKF 237
Query: 346 DSYNDGVYRVTKNYLFTKLFSIQRVSNNSLG-GHAVVITGYGTATCSGTIIPFWIIRNSW 404
Y G Y TK NN H V GYG WI+RNSW
Sbjct: 238 QLYKSGAYTDTK------------CKNNYFALNHEVCAVGYGVVDGK----ECWIVRNSW 281
Query: 405 SPKWGKGGFFYMRRGTNECEI 425
WG G+ M N C +
Sbjct: 282 GTGWGDKGYINMVIEGNTCGV 302
>M.Javanica_Scaff6104g042469 on CAA54437 CP3 (Cysteine protease) [Trichomonas vaginalis]
Length = 255
Score = 38.5 bits (88), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 16/101 (15%)
Query: 166 RCRSIISYVQDQGQCGSCWAVSTASCYTDRRCIERAKRRLRTPNNARNTFSAYDLVSCSK 225
R I++ ++DQ QCGSCWA S + +++ + N +V C
Sbjct: 107 RNAKIVNPIKDQAQCGSCWAFSVVQVQESQWALKKGQLLSLAEQN---------MVDCVD 157
Query: 226 E-DGCNGGVTNEVWRWI---QKNGICTGTDHP---RNGGCK 259
GC+GG + ++ QK TD+P R+G CK
Sbjct: 158 TCYGCDGGDEYLAYDYVIKHQKGLWMLETDYPYTARDGSCK 198
>M.Javanica_Scaff6104g042469 on CAJ20707 Toxopain-2 (Protease) [Toxoplasma gondii]
Length = 255
Score = 34.7 bits (78), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 166 RCRSIISYVQDQGQCGSCWAVSTASCYTDRRCIERAK 202
R R ++ V+DQ CGSCWA ST C + K
Sbjct: 212 RSRGCVTPVKDQRDCGSCWAFSTTGALEGAHCAKTGK 248
>M.Javanica_Scaff6104g042469 on EAN82385 Cruzipain (Cysteine protease) [Trypanosoma cruzi]
Length = 70
Score = 30.8 bits (68), Expect = 0.017, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 11/48 (22%)
Query: 220 LVSCSKED-GCNGGVTNEVWRWI--QKNGICTGTDHPRNGGCKPYPFA 264
LVSC K D GC GG+ N + WI + NG D YP+A
Sbjct: 25 LVSCDKTDSGCGGGLMNNAFEWIVQENNGAVYTED--------SYPYA 64
>M.Javanica_Scaff6104g042469 on XP_001609751 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1298
Score = 28.9 bits (63), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 19 TIKTANSQQNLPGGLLGGLLGVLGNVIDSLRNLLTPKFNLNDEELKDLAEKLGEL 73
++ N+Q+ L G + GV + + L T K L DEELK+ +KLGEL
Sbjct: 645 VVQLGNAQEALEGKDKKAIEGVKEALQVAKEGLDTAKNGL-DEELKEAKDKLGEL 698
>M.Javanica_Scaff6104g042469 on XP_001609666 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1269
Score = 26.2 bits (56), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 61 EELKDLAEKLGE-LAKLGYTITQEELQKRVQQVFE-----INTLTGGEWTAKLNLVSLLP 114
E+LKD+ EK+GE + +LG QE L+ + + V E + G TAK L L
Sbjct: 608 EKLKDVLEKIGEVVVQLGN--AQEALETKDKDVIEKVKEALRKAKEGLETAKNGLKDKLE 665
Query: 115 LEAQKRL 121
EA+K+L
Sbjct: 666 -EAKKKL 671
>M.Javanica_Scaff6104g042469 on XP_001609315 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1338
Score = 25.8 bits (55), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Query: 38 LGVLGNVIDSLRNLLTPKFNLNDE--ELKDLAEKLGE-LAKLGYTITQEELQKRVQ 90
+G +G + D+L + D+ ELKDL EK+GE + +LG QE L+ + +
Sbjct: 663 VGKVGEISDALVKKVEASGGDGDDGKELKDLLEKIGEVVVQLGN--AQEALEGKAE 716
>M.Javanica_Scaff6104g042469 on XP_804096 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 556
Score = 25.0 bits (53), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 102 EWTAKLNLVSLLPLEAQKRL 121
EW A ++L+SL+P E + L
Sbjct: 238 EWAAPISLISLIPEELKSEL 257
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff2764g025074
(113 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6209g042933
(236 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_813641 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.28
XP_820140 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.63
XP_820147 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.63
XP_805336 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.63
XP_820184 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.1
XP_804902 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.3
XP_812615 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.6
XP_804625 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.8
>M.Javanica_Scaff6209g042933 on XP_813641 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 873
Score = 28.9 bits (63), Expect = 0.28, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 6/69 (8%)
Query: 125 KVSNEHQQHQSSNSNENSSSSSSSTGEDYYS---SIVQLDNFEEN---DETQKFHLNPPK 178
+V NE ++ SNE S GE+ + S+ + N DE + LNP K
Sbjct: 663 RVGNEECALRNDESNEISHFYIGGDGENAANKEVSVTVTNVLLYNRPWDEAEITALNPNK 722
Query: 179 SPPPPPPPN 187
P PP PN
Sbjct: 723 DPTPPVTPN 731
>M.Javanica_Scaff6209g042933 on XP_820140 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 875
Score = 27.7 bits (60), Expect = 0.63, Method: Composition-based stats.
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 167 DETQKFHLNPPKSPPPPPPPN 187
DE + LNP K P PP PN
Sbjct: 714 DEAEITALNPNKDPTPPVTPN 734
>M.Javanica_Scaff6209g042933 on XP_820147 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 878
Score = 27.7 bits (60), Expect = 0.63, Method: Composition-based stats.
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 167 DETQKFHLNPPKSPPPPPPPN 187
DE + LNP K P PP PN
Sbjct: 713 DEAEITALNPNKDPTPPVTPN 733
>M.Javanica_Scaff6209g042933 on XP_805336 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 931
Score = 27.7 bits (60), Expect = 0.63, Method: Composition-based stats.
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 167 DETQKFHLNPPKSPPPPPPPN 187
DE + LNP K P PP PN
Sbjct: 718 DEAEITALNPNKDPTPPVTPN 738
>M.Javanica_Scaff6209g042933 on XP_820184 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1050
Score = 26.9 bits (58), Expect = 1.1, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Query: 126 VSNEHQQHQSSN-SNENS---SSSSSSTGEDYYSSIVQLDNFEENDETQKFHLNPPKSPP 181
V +EHQ QS+ S EN S+ + +TG + S+ D E + L P KS
Sbjct: 887 VDSEHQVQQSTEPSAENDDVRSTGTGTTGAEESLSLEARDGSSERTMSSDSSLTPSKSDA 946
Query: 182 PP 183
P
Sbjct: 947 EP 948
>M.Javanica_Scaff6209g042933 on XP_804902 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1042
Score = 26.2 bits (56), Expect = 2.3, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Query: 126 VSNEHQQHQ----SSNSNENSSSSSSSTGEDYYSSIVQLDNFEENDETQKFHLNPPKSPP 181
V +EHQ Q S+ +N+ S+ + +TG + S+ D E + L P KS
Sbjct: 879 VDSEHQVQQITEPSAENNDVRSTGTGTTGAEESLSLEVGDGNSEGTMSSDSSLTPSKSDA 938
Query: 182 PP 183
P
Sbjct: 939 EP 940
>M.Javanica_Scaff6209g042933 on XP_812615 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1116
Score = 25.8 bits (55), Expect = 2.6, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Query: 126 VSNEHQQHQS----SNSNENSSSSSSSTGEDYYSSIVQLDNFEENDETQKFHLNPPKSPP 181
V+ EHQ QS + +N+ S+ + +TG + S+ D E + P KS
Sbjct: 953 VNGEHQVQQSVEPSAENNDVRSTGTGTTGAEESLSLEARDGSSERTMNSGSSITPSKSDA 1012
Query: 182 PP 183
P
Sbjct: 1013 EP 1014
>M.Javanica_Scaff6209g042933 on XP_804625 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1042
Score = 25.8 bits (55), Expect = 2.8, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Query: 129 EHQQHQS----SNSNENSSSSSSSTGEDYYSSIVQLDNFEENDETQKFHLNPPKS 179
EHQ QS S +N+ S+ + +TG + S+ D E + L P KS
Sbjct: 882 EHQVQQSVELFSENNDVRSTGTGTTGAEQSFSLEARDGNSERTMSSDSSLTPSKS 936
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7662g048977
(453 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_804895 Trans-sialidase (Invasion) [Trypanosoma cruzi] 33 0.045
XP_805359 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.30
XP_814038 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.96
XP_802364 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 1.0
XP_804432 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 1.1
XP_802443 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 1.1
XP_809218 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 1.3
XP_802293 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.9
XP_819563 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.9
XP_816532 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.9
XP_810072 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 3.7
XP_828094 VSG (Establishment) [Trypanosoma brucei] 26 4.8
XP_813236 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 5.5
XP_810808 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 6.2
XP_806844 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 7.7
XP_813585 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 8.3
XP_817165 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 8.5
>M.Javanica_Scaff7662g048977 on XP_804895 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 787
Score = 32.7 bits (73), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 241 EASKDLTKAMKIRGDKKIIYIGGILVEENENITTVKNFSDFPLVYVSFGTVDVQ-SGMNV 299
E+ K+ A+ ++G+K +Y+ G L+ E E T +K + LV FG D+Q S M V
Sbjct: 615 ESGKEYQVALMLQGNKSSMYVDGQLLGEEE--TLLKGEAPLELVSFCFGACDMQNSPMTV 672
Query: 300 GDI 302
++
Sbjct: 673 TNV 675
>M.Javanica_Scaff7662g048977 on XP_805359 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 788
Score = 30.0 bits (66), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 241 EASKDLTKAMKIRGDKKIIYIGGILVEENENITTVKNFSDFPLVYVS--FGTVDVQ-SGM 297
E+ K+ + ++G+K +Y+ G L+ E E + T + PL VS FG D+Q S M
Sbjct: 616 ESGKEYQVTLMLQGNKSSMYVDGQLLGEEETLLT----GEAPLELVSFCFGACDMQNSPM 671
Query: 298 NVGDI 302
V ++
Sbjct: 672 TVTNV 676
>M.Javanica_Scaff7662g048977 on XP_814038 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 790
Score = 28.5 bits (62), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 241 EASKDLTKAMKIRGDKKIIYIGGILVEENENITTVK---NFSDFPLVYVSFGTVD 292
E+ K+ A+ ++G+K +YI G L+ E E ++T + + +DF FG D
Sbjct: 621 ESGKEYQVALMLQGNKASVYIDGKLLGEEEALSTDERPIDVADFCFGACDFGDDD 675
>M.Javanica_Scaff7662g048977 on XP_802364 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 327
Score = 28.1 bits (61), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 241 EASKDLTKAMKIRGDKKIIYIGGILVEENENITTVKNFSDFPLVYVSFGTVDVQ-SGMNV 299
E K+ A+ ++G+K +Y+ G + E E T + + L+Y FG D++ S M V
Sbjct: 150 ELKKEYQVALMLQGNKSSVYVDGNSLGEEEAPLT--DETPLELLYFCFGACDMKNSPMTV 207
Query: 300 GDI 302
D+
Sbjct: 208 KDV 210
>M.Javanica_Scaff7662g048977 on XP_804432 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 799
Score = 28.1 bits (61), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 241 EASKDLTKAMKIRGDKKIIYIGGILVEENENITTVKNFSDFPLVYVSFGTVDVQ-SGMNV 299
E K+ A+ ++G+K +Y+ G + E E T + + L+Y FG D++ S M V
Sbjct: 631 ELKKEYQVALMLQGNKSSVYVDGKSLGEEEAPLT--DETPLELLYFCFGACDMKNSPMTV 688
Query: 300 GDI 302
D+
Sbjct: 689 KDV 691
>M.Javanica_Scaff7662g048977 on XP_802443 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 358
Score = 28.1 bits (61), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 241 EASKDLTKAMKIRGDKKIIYIGGILVEENENITTVKNFSDFPLVYVSFGTVDVQ-SGMNV 299
E K+ A+ ++G+K +Y+ G + E E + T + + L+Y FG D + S M V
Sbjct: 175 ELKKEYQVALMLQGNKSSVYVDGKSLGEEEALLTGE--TPLELLYFCFGACDTKNSPMTV 232
Query: 300 GDI 302
++
Sbjct: 233 KNV 235
>M.Javanica_Scaff7662g048977 on XP_809218 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 792
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 241 EASKDLTKAMKIRGDKKIIYIGGILVEENENITTVKNFSDFPLVYVSFGTVDVQ 294
E K+ A+ ++G+K +Y+ G + E E + T K + L+Y FG D++
Sbjct: 617 ELKKEYQVALMLQGNKSSVYVDGKSLGEEEALLTDK--TPLELLYFCFGACDMK 668
>M.Javanica_Scaff7662g048977 on XP_802293 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 138
Score = 26.6 bits (57), Expect = 1.9, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 254 GDKKIIYIGGILVEENENITTVKNFS-DFPLVYVSFGTVDVQSGMNVGDI 302
G+K +Y+ G++V ENI T + + Y G D+ S + V +
Sbjct: 22 GNKGSVYVNGVIVGSPENIATPETLGHEITQFYFGGGEGDINSNVTVTSV 71
>M.Javanica_Scaff7662g048977 on XP_819563 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 720
Score = 26.9 bits (58), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 241 EASKDLTKAMKIRGDKKIIYIGGILVEENENITTVKNFSDFPLVYVSF 288
E+ K+ A+ ++G+K +YI G L+ E E + T + PL V F
Sbjct: 616 ESGKEYQVALMLQGNKASVYIDGKLLGEEETMLT----GETPLGLVRF 659
>M.Javanica_Scaff7662g048977 on XP_816532 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 725
Score = 26.9 bits (58), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 241 EASKDLTKAMKIRGDKKIIYIGGILVEENENITTVKNFSDFPLVYVSF 288
E+ K+ A+ ++G+K +YI G L+ E E + T + PL V F
Sbjct: 614 ESGKEYQVALMLQGNKASVYIDGKLLGEEETMLT----GETPLGLVRF 657
>M.Javanica_Scaff7662g048977 on XP_810072 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 731
Score = 26.6 bits (57), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
Query: 241 EASKDLTKAMKIRGDKKIIYIGGILVEENENITTVKNFSDFPLVYVS--FGTVDVQ 294
E+ K+ A+ ++G+K +Y+ G + E E + T + PL VS FG +Q
Sbjct: 616 ESGKEYQVALMLQGNKSFVYVDGKPLGEEETLLT----GERPLELVSFCFGACGIQ 667
>M.Javanica_Scaff7662g048977 on XP_828094 VSG (Establishment) [Trypanosoma brucei]
Length = 483
Score = 26.2 bits (56), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 50 RRSTQPFRQREGKAHVEEESETEGGWNSK 78
++S +P + EG+ +++ SETE N K
Sbjct: 393 KQSNEPAKSSEGQTKMQQPSETEDSCNKK 421
>M.Javanica_Scaff7662g048977 on XP_813236 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 728
Score = 25.8 bits (55), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 241 EASKDLTKAMKIRGDKKIIYIGGILVEENENITTVKNFSDFPLVYVSFGTVDVQ 294
EA K+ A+ ++G+K +Y+ G + E E +K+ LV FG +Q
Sbjct: 613 EAGKEYQVALMLQGNKSFVYVDGKSLGEEE--LPLKSERPLELVSFCFGACGIQ 664
>M.Javanica_Scaff7662g048977 on XP_810808 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 735
Score = 25.8 bits (55), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 241 EASKDLTKAMKIRGDKKIIYIGGILVEENENITTVKNFSDFPLVYVSFGTVDVQSG 296
E K+ A+ ++G+K +YI G L+ E E T + + LV FG D + G
Sbjct: 618 EPKKEHQVALMLQGNKASVYIDGELLGEEEAPLTGE--APLELVRFCFGAYDQKEG 671
>M.Javanica_Scaff7662g048977 on XP_806844 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 740
Score = 25.4 bits (54), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 241 EASKDLTKAMKIRGDKKIIYIGGILVEENENITTVKNFSDFPLVYVSF 288
E K+ A+ ++G+K +Y+ G L+ E E + T + PL V F
Sbjct: 617 EPKKEYQVALMLQGNKASVYVDGKLLGEEETMLT----GETPLELVRF 660
>M.Javanica_Scaff7662g048977 on XP_813585 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 800
Score = 25.4 bits (54), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 226 KAHKERINSERIFFEEASKDLTKAMKIRGDKKIIYIGGILVEENENITTVKNFSDFPLVY 285
K K+ R + EA K+ A+ ++G+K +YI G + E E T + + L
Sbjct: 603 KGGKKTTTESRPW--EAGKEYQVALMLQGNKASVYIDGKSLGEEE--TPLTGETPLELFG 658
Query: 286 VSFGTVDV 293
FG D+
Sbjct: 659 FCFGACDI 666
>M.Javanica_Scaff7662g048977 on XP_817165 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 750
Score = 25.4 bits (54), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 241 EASKDLTKAMKIRGDKKIIYIGGILVEENENITTVKNFSDFPLVYVSFGTVD 292
E K+ A+ ++G+K +YI G + E E +K+ + LV+ FG D
Sbjct: 616 EPKKEYQVALILQGNKASVYIDGESLGEEE--VPLKSETRLGLVHFCFGACD 665
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff30675g097793
(171 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4464g034733
(260 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_807450 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.9
XP_802771 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.8
XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum] 25 4.8
XP_814625 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 5.4
XP_802427 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 7.0
XP_001349438 PfEMP1 (Establishment) [Plasmodium falciparum] 25 7.4
XP_001350413 PfEMP1 (Establishment) [Plasmodium falciparum] 25 7.5
>M.Javanica_Scaff4464g034733 on XP_807450 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 810
Score = 25.8 bits (55), Expect = 2.9, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 12/93 (12%)
Query: 83 ENNRINEYTTAKIKDDEEDQLNNEGSGVDNEFPEDNDVNGLDINTTRTYANDVND-NDND 141
+NNR T + +E NN G V + + DN T+ D+ +D++
Sbjct: 381 DNNRDVMLVTLPVYSKKEKSGNNNGKSVLHLWVTDN-----------THIVDIGPVSDDE 429
Query: 142 EGDGQECVYEDGVINDNGEERTPTSEEQKQIEE 174
+ +Y+ G DN +E T E+K+ +E
Sbjct: 430 DAAASSLLYKSGKDGDNKKEELITLYEKKKGDE 462
>M.Javanica_Scaff4464g034733 on XP_802771 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 341
Score = 25.4 bits (54), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 35/109 (32%), Gaps = 3/109 (2%)
Query: 17 SDDSNSEDNGNENSNSKPSDEFADSVDVREHDN--EQQPSNSIDNQNLQDPQFIKEDDTN 74
S S DNG ++ S P D A S DN PS DN P + +
Sbjct: 196 STPSTPADNGAHSTPSTPGDNGAHSTPSTPADNGAHSTPSTPGDNGAHSTPSTPADSSAH 255
Query: 75 ALPPLNNEENNRINEYTTAKIKDDEEDQLNNEGSGVDN-EFPEDNDVNG 122
+ P + + T A + + S P DN NG
Sbjct: 256 STPSTPADSSAHSTPSTPADSSAHSTPSIPADSSAHSTPSAPADNGANG 304
>M.Javanica_Scaff4464g034733 on XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3954
Score = 25.4 bits (54), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 46/121 (38%), Gaps = 23/121 (19%)
Query: 143 GDGQECVYEDGV---INDNGEERTPTSEEQKQIEEYLEKMREYEKQMVKDSANFMRNLAQ 199
GDG C E G IN N R E + ++K EY+KQ K N N+
Sbjct: 2008 GDGYHCDDEKGTYNSINANLNCRDCMKECRNYKTWIVKKKNEYDKQKSK-YVNEHENVIS 2066
Query: 200 FVMSQ-----FENI--FGSSVSTLSK------------NNNNLLEKKPVEAPTPPCLCKK 240
F+ Q +ENI + S+ + NN L K P E +P CK
Sbjct: 2067 FLNKQSYKQLYENIKPYSSAADFFTSLNHCKPDKANDDKNNKLNFKNPHETFSPSTYCKA 2126
Query: 241 C 241
C
Sbjct: 2127 C 2127
>M.Javanica_Scaff4464g034733 on XP_814625 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 941
Score = 25.0 bits (53), Expect = 5.4, Method: Composition-based stats.
Identities = 17/71 (23%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 79 LNNEENNRINEYTTAKIKD--DEEDQLNNEGSGVDNEFPEDNDVNGLDINTTRTYANDVN 136
L EN R + +T+ + + +E V +FPE N +D ++ D
Sbjct: 769 LRTSENARSSVLSTSAVSSVTNSPAAKESENQSVSGKFPEGNPNVDVDSSSEEVQTVDAE 828
Query: 137 DNDNDEGDGQE 147
D +GDG +
Sbjct: 829 TGDTVQGDGTQ 839
>M.Javanica_Scaff4464g034733 on XP_802427 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 390
Score = 24.6 bits (52), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 27/68 (39%), Gaps = 4/68 (5%)
Query: 24 DNGNENSNSKPSDEFADSVDVREHDN--EQQPSNSIDNQNLQDPQFIKEDDTNALP--PL 79
DNG ++ S P D A S + DN PS DN P ++ ++ P P
Sbjct: 288 DNGAHSTPSAPGDNGAHSTPLTPGDNGAHSTPSTPGDNGAHSTPSAPADNGAHSTPSTPA 347
Query: 80 NNEENNRI 87
+ N +
Sbjct: 348 GHGANGTV 355
>M.Javanica_Scaff4464g034733 on XP_001349438 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2265
Score = 24.6 bits (52), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 17/22 (77%)
Query: 86 RINEYTTAKIKDDEEDQLNNEG 107
R++EY KIKD++ ++ NNEG
Sbjct: 99 RVDEYDEKKIKDNKGNRGNNEG 120
>M.Javanica_Scaff4464g034733 on XP_001350413 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2860
Score = 24.6 bits (52), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 163 TPTSEEQKQ-IEEYLEKMREYEKQMVKDSANFM 194
TP + KQ EEY +K++E+EKQ K ++
Sbjct: 1072 TPECNDCKQACEEYNKKIKEWEKQWHKIQVQYL 1104
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff3706g030709
(97 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_804506 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.36
XP_845136 VSG (Establishment) [Trypanosoma brucei] 23 4.9
>M.Javanica_Scaff3706g030709 on XP_804506 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1012
Score = 26.2 bits (56), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/90 (21%), Positives = 37/90 (41%)
Query: 7 NIFLLITLILLLDKHQNEKHSFGVLADPEPYRSAAVIAAEARARAIEAENRARRARLEAE 66
++F+ T +LL N + + A P + VIAA A R E+ + ++
Sbjct: 344 DLFVPQTTVLLPRGGVNSEKKWNSFASPSLVSAGGVIAAFAEGRPSSKESNNASSEPSSD 403
Query: 67 ARARRLEAEARARRIEAEARANAAAARQFI 96
A A +++ + AE + + A +
Sbjct: 404 AVAWYIDSAWDWSTLVAEVKKSTWQAHTVL 433
>M.Javanica_Scaff3706g030709 on XP_845136 VSG (Establishment) [Trypanosoma brucei]
Length = 481
Score = 22.7 bits (47), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 10/40 (25%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 50 RAIEAENRARRARLEAEARARRLEAEARAR---RIEAEAR 86
R ++A+N++ A+ AEA+ +++ + + + AEA+
Sbjct: 391 RQLQAQNKSETAKEAAEAKCNKIDKDTECKTPCKWNAEAQ 430
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff8065g050548
(80 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349030 PfEMP1 (Establishment) [Plasmodium falciparum] 25 0.38
XP_001349034 PfEMP1 (Establishment) [Plasmodium falciparum] 25 0.49
XP_001352170 MSP1 (Invasion) [Plasmodium falciparum] 22 8.7
>M.Javanica_Scaff8065g050548 on XP_001349030 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 25.4 bits (54), Expect = 0.38, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 2 PPSQPQPPQQPSQPPHFITKTF 23
PPSQP PQ + P +T T
Sbjct: 1713 PPSQPTTPQIVDKTPALVTSTL 1734
>M.Javanica_Scaff8065g050548 on XP_001349034 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 25.0 bits (53), Expect = 0.49, Method: Composition-based stats.
Identities = 7/12 (58%), Positives = 10/12 (83%)
Query: 6 PQPPQQPSQPPH 17
P+PP QP+ PP+
Sbjct: 1721 PKPPSQPTNPPN 1732
Score = 23.5 bits (49), Expect = 2.0, Method: Composition-based stats.
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 2 PPSQPQPPQQPSQPPHFI 19
PPSQP P P + P I
Sbjct: 1723 PPSQPTNPPNPFEHPAVI 1740
>M.Javanica_Scaff8065g050548 on XP_001352170 MSP1 (Invasion) [Plasmodium falciparum]
Length = 1720
Score = 21.6 bits (44), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 6/11 (54%), Positives = 10/11 (90%)
Query: 1 MPPSQPQPPQQ 11
+PP+QP PP++
Sbjct: 765 LPPTQPSPPKE 775
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff791g009932
(225 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001608664 variant erythrocyte surface antigen-1, beta subuni... 27 0.79
>M.Javanica_Scaff791g009932 on XP_001608664 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1116
Score = 27.3 bits (59), Expect = 0.79, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Query: 172 PTSVTNSQSYVAQLAAQAQLAAAVSNGGVAGTGSTTSTNNLKRSSKNLDQRR 223
P + Q + + +AQ AA S+GG AGT STN KN +R
Sbjct: 495 PLVLIGIQGTIEKEVDKAQPAAQGSSGGSAGTAQ--STNKCPEHKKNPSAKR 544
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7957g050124
(57 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001610720 variant erythrocyte surface antigen-1, beta subuni... 24 0.50
XP_001611366 variant erythrocyte surface antigen-1, beta subuni... 23 1.7
XP_803151 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.8
XP_001608784 variant erythrocyte surface antigen-1, beta subuni... 22 4.6
>M.Javanica_Scaff7957g050124 on XP_001610720 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1102
Score = 24.3 bits (51), Expect = 0.50, Method: Composition-based stats.
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 33 CCGSNPTCCSPGAE 46
C GS CCSPG +
Sbjct: 165 CNGSGVNCCSPGGK 178
>M.Javanica_Scaff7957g050124 on XP_001611366 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1173
Score = 22.7 bits (47), Expect = 1.7, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 10/21 (47%)
Query: 28 AIGGICCGSNPTCCSPGAESG 48
IG C TCCSPG +
Sbjct: 154 GIGKECKCVGGTCCSPGGSAA 174
>M.Javanica_Scaff7957g050124 on XP_803151 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 755
Score = 22.7 bits (47), Expect = 1.8, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 17 IVFAKSFDEQLAIGGICCGSNPTCCSPGAESG 48
++ S++ + +CC NP S G E+G
Sbjct: 492 VLLGLSYNSEKKWHVLCCDGNPEELSSGWETG 523
>M.Javanica_Scaff7957g050124 on XP_001608784 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 329
Score = 21.6 bits (44), Expect = 4.6, Method: Composition-based stats.
Identities = 7/13 (53%), Positives = 7/13 (53%)
Query: 33 CCGSNPTCCSPGA 45
C G TCCS G
Sbjct: 164 CSGGGGTCCSAGG 176
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4610g035457
(322 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_817637 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.8
>M.Javanica_Scaff4610g035457 on XP_817637 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 986
Score = 25.0 bits (53), Expect = 6.8, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 9/72 (12%)
Query: 112 DEQDLSICLQYIFEKLNLPENKQRGFKLFEWLKEQS-IKKESPMFEEFKDGMKAKERSKL 170
+++D+ + ++ K N +NKQ+G +L W+ + + + P+ E D +
Sbjct: 324 EDKDVMLVTLPVYSKENGKDNKQKG-RLHLWVTDNTRVYDVGPISREGDDAAAS------ 376
Query: 171 LELLIKDRNESL 182
LL+K NE+L
Sbjct: 377 -SLLMKSGNENL 387
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff6528g044354
(159 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_815156 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.1
XP_813421 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.2
XP_001351080 PfEMP1 (Establishment) [Plasmodium falciparum] 24 4.4
XP_001350796 PfEMP1 (Establishment) [Plasmodium falciparum] 24 5.0
XP_804800 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.5
>M.Javanica_Scaff6528g044354 on XP_815156 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 966
Score = 24.3 bits (51), Expect = 4.1, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 21/46 (45%)
Query: 104 MIDGGDCPSEIQNSFQNQPTDTETPIYGTQLISGKWNVVDCADRVY 149
++DG D N +D + +G L+SG + VD R+Y
Sbjct: 188 VVDGSDIYMLAGNYSNKGASDGQAGDWGLLLVSGNVSTVDSKKRIY 233
>M.Javanica_Scaff6528g044354 on XP_813421 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 746
Score = 24.3 bits (51), Expect = 4.2, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 21/46 (45%)
Query: 104 MIDGGDCPSEIQNSFQNQPTDTETPIYGTQLISGKWNVVDCADRVY 149
++DG D N +D + +G L+SG + VD R+Y
Sbjct: 187 VVDGSDIYMLAGNYSNKGVSDDQAGDWGLLLVSGNVSTVDSKKRIY 232
>M.Javanica_Scaff6528g044354 on XP_001351080 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2209
Score = 24.3 bits (51), Expect = 4.4, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 107 GGDCPSEIQNSFQNQPTDTETP 128
G + PS+ QN QN ++TP
Sbjct: 1880 GKNTPSDTQNDIQNDGIPSDTP 1901
>M.Javanica_Scaff6528g044354 on XP_001350796 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2646
Score = 24.3 bits (51), Expect = 5.0, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 107 GGDCPSEIQNSFQNQPTDTETP 128
G + PS+ QN QN ++TP
Sbjct: 2302 GKNTPSDTQNDIQNDGIPSDTP 2323
>M.Javanica_Scaff6528g044354 on XP_804800 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 940
Score = 23.9 bits (50), Expect = 5.5, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 21/46 (45%)
Query: 104 MIDGGDCPSEIQNSFQNQPTDTETPIYGTQLISGKWNVVDCADRVY 149
++DG D N +D + +G L+SG + VD R+Y
Sbjct: 179 VVDGSDIYMLAGNYSNKGVSDDQAGDWGLLLVSGNVSTVDSKKRIY 224
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff7113g046791
(87 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_812339 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 7.1
>M.Javanica_Scaff7113g046791 on XP_812339 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 949
Score = 21.9 bits (45), Expect = 7.1, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 20/33 (60%)
Query: 1 MFKNTLNGNSSNCLILIRTMRRSQYQNIESLWS 33
++K+ +G++ LI++ ++ ++ SLWS
Sbjct: 424 LYKSAESGDNGEKLIVLYEKKKGDEESSHSLWS 456
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4401g034421
(90 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_818862 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.59
XP_804139 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.59
XP_804269 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 7.8
XP_001349035 PfEMP1 (Establishment) [Plasmodium falciparum] 22 9.4
>M.Javanica_Scaff4401g034421 on XP_818862 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 790
Score = 25.4 bits (54), Expect = 0.59, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 8 TAISLFLF--VLNIKQMFGQHQLFPLFLQPPEPQFQSLPQKQPNGHSPNEK 56
T ++FL+ LN +M P++ + PEPQ +PQ + S EK
Sbjct: 672 TVKNVFLYNRPLNSTEMTAIKDRKPVWTRAPEPQAGDVPQTIASAVSGPEK 722
>M.Javanica_Scaff4401g034421 on XP_804139 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 793
Score = 25.4 bits (54), Expect = 0.59, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 8 TAISLFLF--VLNIKQMFGQHQLFPLFLQPPEPQFQSLPQKQPNGHSPNEK 56
T ++FL+ LN +M P++ + PEPQ +PQ + S EK
Sbjct: 675 TVKNVFLYNRPLNSTEMTAIKDRKPVWTRAPEPQAGDVPQTIASAVSGPEK 725
>M.Javanica_Scaff4401g034421 on XP_804269 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 525
Score = 21.9 bits (45), Expect = 7.8, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Query: 4 KRYFTAISLFLF--VLNIKQMFGQHQLFPLFLQPPEPQFQ 41
K + T ++FL+ LN +M P+ + PEPQ +
Sbjct: 397 KPHVTVTNVFLYNRPLNPTEMRAIKDRIPVSTRAPEPQVK 436
>M.Javanica_Scaff4401g034421 on XP_001349035 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2239
Score = 21.9 bits (45), Expect = 9.4, Method: Composition-based stats.
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 66 EADADCKNRFCDFSALSSNNVLXSK 90
E D + +NR+CD + N K
Sbjct: 329 EEDENGENRYCDLNGYDCKNTAKGK 353
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff4453g034671
(400 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_966160 PfEMP1 (Establishment) [Plasmodium falciparum] 27 3.7
AAX07984 alpha-7.2 giardin (Others) [Giardia duodenalis] 25 7.9
>M.Javanica_Scaff4453g034671 on XP_966160 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2394
Score = 26.6 bits (57), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 5/115 (4%)
Query: 214 EDLDINSVDSVHTDELDLIIDVWIPPKFDDHFSSNHRHYAIPGSKQLLRWTITESNPPVK 273
ED+DIN++ + + +IDV + P D F++ IP ++T E N +
Sbjct: 2121 EDIDINNIYPYKSPKYKTLIDVVLEPSKRDTFNT---QSDIPSDTSTNKFTDNEWNQLKQ 2177
Query: 274 IWTLNKDGEILIEKEKIKIIQNLNETTKPFFAVLIENVQDEDY--GRYTLTAHNG 326
+ N ++ K I N+ T P +L +++Q++ + + HNG
Sbjct: 2178 DFISNISQNSQMDLPKNNISGNIQMDTHPHVNILDDSMQEKPFITSIHDRDLHNG 2232
>M.Javanica_Scaff4453g034671 on AAX07984 alpha-7.2 giardin (Others) [Giardia duodenalis]
Length = 255
Score = 25.0 bits (53), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 17/38 (44%)
Query: 95 PKITEQNSGEYKCLFFDDLQKTINLFILKNLEWKTKIN 132
P+I + G Y LF DD + T+ I W +N
Sbjct: 195 PEIYARVKGRYHQLFGDDFESTLRKEIGSKTVWARMVN 232
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff731g009385
(72 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_803379 VSG (Establishment) [Trypanosoma brucei] 22 4.9
>M.Javanica_Scaff731g009385 on XP_803379 VSG (Establishment) [Trypanosoma brucei]
Length = 532
Score = 21.9 bits (45), Expect = 4.9, Method: Composition-based stats.
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 5 TQSQSQQSKQPTQQPPTLIN 24
T+ Q+Q+S TQ TLIN
Sbjct: 398 TKEQTQKSTTATQAQNTLIN 417
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]