BLAST Search Results

BLAST Results

|EAY07008.1|EAY07012.1|EAY07015.1|EAY07018.1|EAY07019.1|EAY07022.1|EAY07033.1|EAY07035.1|EAY07036.1|EAY07039.1|EAY07041.1|EAY07045.1|EAY07050.1|EAY07052.1|EAY07060.1|EAY07061.1|EAY07067.1|EAY07076.1|EAY07077.1|EAY07086.1|EAY07087.1|EAY07088.1|EAY07089.1|EAY07096.1|EAY07097.1|EAY07098.1|EAY07102.1|EAY07111.1|EAY07115.1|EAY07116.1|EAY07117.1|EAY07119.1|EAY07124.1|EAY07125.1|EAY07126.1|EAY07128.1|EAY07131.1|EAY07134.1|EAY07143.1|EAY07144.1|EAY07145.1|EAY07156.1|EAY07157.1|EAY07159.1|EAY07169.1|EAY07174.1|EAY07176.1|EAY07179.1|EAY07184.1|EAY07200.1|EAY07201.1|EAY07204.1|EAY07207.1|EAY07210.1|EAY07211.1|EAY07212.1|EAY07217.1|EAY07218.1|EAY07219.1|EAY07220.1|EAY07222.1|EAY07224.1|EAY07227.1|EAY07231.1|EAY07251.1|EAY07274.1|EAY07275.1|EAY07276.1|EAY07287.1|EAY07301.1|EAY07306.1|EAY07312.1|EAY07313.1|EAY07317.1|EAY07319.1|EAY07324.1|EAY07325.1|EAY07329.1|EAY07331.1|EAY07333.1|EAY07334.1|EAY07335.1|EAY07353.1|EAY07355.1|EAY07361.1|EAY07363.1|EAY07367.1|EAY07368.1|EAY07369.1|EAY07370.1|EAY07374.1|EAY07375.1|EAY07381.1|EAY07382.1|EAY07384.1|EAY07385.1|EAY07389.1|EAY07392.1|EAY07393.1|EAY07412.1|EAY07415.1|EAY07417.1|EAY07424.1|EAY07425.1|EAY07426.1|EAY07427.1|EAY07431.1|EAY07441.1|EAY07442.1|EAY07452.1|EAY07453.1|EAY07454.1|EAY07456.1|EAY07458.1|EAY07470.1|EAY07471.1|EAY07473.1|EAY07481.1|EAY07482.1|EAY07484.1|EAY07488.1|EAY07503.1|EAY07509.1|EAY07513.1|EAY07514.1|EAY07520.1|EAY07522.1|EAY07523.1|EAY07526.1|EAY07528.1|EAY07535.1|EAY07538.1|EAY07540.1|EAY07546.1|EAY07547.1|EAY07548.1|EAY07552.1|EAY07559.1|EAY07561.1|EAY07570.1|EAY07571.1|EAY07573.1|EAY07582.1|EAY07585.1|EAY07593.1|EAY07594.1|EAY07612.1|EAY07614.1|EAY07616.1|EAY07619.1|EAY07626.1|EAY07633.1|EAY07638.1|EAY07641.1|EAY07649.1|EAY07662.1|EAY07668.1|EAY07672.1|EAY07673.1|EAY07675.1|EAY07677.1|EAY07678.1|EAY07679.1|EAY07681.1|EAY07684.1|EAY07691.1|EAY07692.1|EAY07695.1|EAY07696.1|EAY07697.1|EAY07698.1|EAY07699.1|EAY07703.1|EAY07710.1|EAY07713.1|EAY07714.1|EAY07715.1|EAY07718.1|EAY07720.1|EAY07721.1|EAY07722.1|EAY07725.1|EAY07727.1|EAY07734.1|EAY07738.1|EAY07739.1|EAY07741.1|EAY07743.1|EAY07748.1|EAY07749.1|EAY07753.1|EAY07763.1|EAY07764.1|EAY07765.1|EAY07766.1|EAY07768.1|EAY07769.1|EAY07774.1|EAY07777.1|EAY07779.1|EAY07782.1|EAY07784.1|EAY07785.1|EAY07786.1|EAY07787.1|EAY07789.1|EAY07791.1|EAY07795.1|EAY07797.1|EAY07799.1|EAY07801.1|EAY07809.1|EAY07816.1|EAY07822.1|EAY07832.1|EAY07841.1|EAY07842.1|EAY07843.1|EAY07844.1|EAY07846.1|EAY07848.1|EAY07852.1|EAY07857.1|EAY07862.1|EAY07865.1|EAY07868.1|EAY07869.1|EAY07870.1|EAY07872.1|EAY07873.1|EAY07877.1|EAY07893.1|EAY07900.1|EAY07902.1|EAY07903.1|EAY07911.1|EAY07914.1|EAY07915.1|EAY07921.1|EAY07926.1|EAY07931.1|EAY07933.1|EAY07937.1|EAY07961.1|EAY07964.1|EAY07965.1|EAY07967.1|EAY07971.1|EAY07973.1|EAY07975.1|EAY07977.1|EAY07981.1|EAY07986.1|EAY07990.1|EAY07992.1|EAY08003.1|EAY08007.1|EAY08017.1|EAY08019.1|EAY08024.1|EAY08025.1|EAY08042.1|EAY08055.1|EAY08056.1|EAY08066.1|EAY08067.1|EAY08068.1|EAY08071.1|EAY08090.1|EAY08093.1|EAY08099.1|EAY08101.1|EAY08102.1|EAY08108.1|EAY08115.1|EAY08116.1|EAY08124.1|EAY08127.1|EAY08130.1|EAY08131.1|EAY08138.1|EAY08144.1|EAY08150.1|EAY08154.1|EAY08156.1|EAY08160.1|EAY08166.1|EAY08167.1|EAY08171.1|EAY08178.1|EAY08189.1|EAY08196.1|EAY08201.1|EAY08202.1|EAY08206.1|EAY08208.1|EAY08228.1|EAY08229.1|EAY08230.1|EAY08232.1|EAY08240.1|EAY08241.1|EAY08249.1|EAY08250.1|EAY08251.1|EAY08252.1|EAY08255.1|EAY08256.1|EAY08263.1|EAY08268.1|EAY08270.1|EAY08274.1|EAY08279.1|EAY08283.1|EAY08284.1|EAY08286.1|EAY08304.1|EAY08306.1|EAY08309.1|EAY08313.1|EAY08319.1|EAY08321.1|EAY08326.1|EAY08327.1|EAY08333.1|EAY08335.1|EAY08356.1|EAY08362.1|EAY08365.1|EAY08373.1|EAY08375.1|EAY08376.1|EAY08377.1|EAY08378.1|EAY08385.1|EAY08387.1|EAY08392.1|EAY08393.1|EAY08402.1|EAY08408.1|EAY08411.1|EAY08414.1|EAY08415.1|EAY08420.1|EAY08423.1|EAY08427.1|EAY08429.1|EAY08434.1|EAY08439.1|EAY08443.1|EAY08444.1|EAY08445.1|EAY08446.1|EAY08451.1|EAY08453.1|EAY08454.1|EAY08455.1|EAY08456.1|EAY08460.1|EAY08465.1|EAY08467.1|EAY08468.1|EAY08470.1|EAY08472.1|EAY08476.1|EAY08481.1|EAY08489.1|EAY08501.1|EAY08523.1|EAY08524.1|EAY08525.1|EAY08527.1|EAY08528.1|EAY08547.1|EAY08576.1|EAY08584.1|EAY08585.1|EAY08586.1|EAY08589.1|EAY08590.1|EAY08591.1|EAY08595.1|EAY08600.1|EAY08607.1|EAY08608.1|EAY08613.1|EAY08614.1|EAY08620.1|EAY08625.1|EAY08626.1|EAY08638.1|EAY08641.1|EAY08645.1|EAY08648.1|EAY08649.1|EAY08651.1|EAY08655.1|EAY08680.1|EAY08682.1|EAY08683.1|EAY08684.1|EAY08685.1|EAY08686.1|EAY08687.1|EAY08689.1|EAY08690.1|EAY08691.1|EAY08692.1|EAY08694.1|EAY08696.1|EAY08697.1|EAY08700.1|EAY08701.1|EAY08707.1|EAY08708.1|EAY08709.1|EAY08711.1|EAY08729.1|EAY08742.1|EAY08748.1|EAY08752.1|EAY08765.1|EAY08768.1|EAY08779.1|EAY08780.1|EAY08783.1|EAY08792.1|EAY08802.1|EAY08803.1|EAY08814.1|EAY08823.1|EAY08827.1|EAY08836.1|EAY08837.1|EAY08855.1|EAY08868.1|EAY08870.1|EAY08871.1|EAY08872.1|EAY08873.1|EAY08877.1|EAY08900.1|EAY08902.1|EAY08907.1|EAY08918.1|EAY08919.1|EAY08922.1|EAY08939.1|EAY08944.1|EAY08958.1|EAY08961.1|EAY08962.1|EAY08963.1|EAY08995.1|EAY08996.1|EAY08998.1|EAY08999.1|EAY09004.1|EAY09006.1|EAY09007.1|EAY09009.1|EAY09019.1|EAY09022.1|EAY09034.1|EAY09035.1|EAY09037.1|EAY09038.1|EAY09046.1|EAY09063.1|EAY09071.1|EAY09074.1|EAY09076.1|EAY09080.1|EAY09081.1|EAY09082.1|EAY09086.1|EAY09094.1|EAY09100.1|EAY09109.1|EAY09111.1|EAY09114.1|EAY09118.1|EAY09119.1|EAY09122.1|EAY09123.1|EAY09124.1|EAY09126.1|EAY09129.1|EAY09144.1|EAY09147.1|EAY09149.1|EAY09150.1|EAY09154.1|EAY09158.1|EAY09160.1|EAY09163.1|EAY09168.1|EAY09171.1|EAY09173.1|EAY09177.1|EAY09178.1|EAY09182.1|EAY09183.1|EAY09187.1|EAY09190.1|EAY09211.1|EAY09212.1|EAY09215.1|EAY09219.1|EAY09220.1|EAY09227.1|EAY09249.1|EAY09252.1|EAY09254.1|EAY09255.1|EAY09257.1|EAY09267.1|EAY09272.1|EAY09277.1|EAY09280.1|EAY09284.1|EAY09302.1|EAY09303.1|EAY09304.1|EAY09305.1|EAY09306.1|EAY09321.1|EAY09334.1|EAY09336.1|EAY09346.1|EAY09347.1|EAY09354.1|EAY09357.1|EAY09359.1|EAY09361.1|EAY09367.1|EAY09378.1|EAY09381.1|EAY09383.1|EAY09385.1|EAY09395.1|EAY09413.1|EAY09414.1|EAY09420.1|EAY09422.1|EAY09423.1|EAY09424.1|EAY09426.1|EAY09428.1|EAY09429.1|EAY09439.1|EAY09441.1|EAY09446.1|EAY09458.1|EAY09459.1|EAY09460.1|EAY09463.1|EAY09485.1|EAY09489.1|EAY09491.1|EAY09493.1|EAY09496.1|EAY09498.1|EAY09500.1|EAY09517.1|EAY09519.1|EAY09523.1|EAY09525.1|EAY09528.1|EAY09535.1|EAY09536.1|EAY09541.1|EAY09543.1|EAY09546.1|EAY09548.1|EAY09549.1|EAY09556.1|EAY09558.1|EAY09570.1|EAY09578.1|EAY09583.1|EAY09585.1|EAY09595.1|EAY09598.1|EAY09600.1|EAY09601.1|EAY09602.1|EAY09603.1|EAY09609.1|EAY09611.1|EAY09613.1|EAY09617.1|EAY09621.1|EAY09622.1|EAY09626.1|EAY09627.1|EAY09628.1|EAY09630.1|EAY09651.1|EAY09652.1|EAY09668.1|EAY09680.1|EAY09687.1|EAY09693.1|EAY09701.1|EAY09719.1|EAY09724.1|EAY09727.1|EAY09734.1|EAY09739.1|EAY09749.1|EAY09752.1|EAY09755.1|EAY09756.1|EAY09758.1|EAY09759.1|EAY09760.1|EAY09761.1|EAY09768.1|EAY09771.1|EAY09784.1|EAY09785.1|EAY09792.1|EAY09794.1|EAY09796.1|EAY09797.1|EAY09799.1|EAY09800.1|EAY09803.1|EAY09806.1|EAY09811.1|EAY09812.1|EAY09814.1|EAY09815.1|EAY09824.1|EAY09825.1|EAY09836.1|EAY09840.1|EAY09841.1|EAY09842.1|EAY09843.1|EAY09850.1|EAY09855.1|EAY09858.1|EAY09860.1|EAY09865.1|EAY09867.1|EAY09880.1|EAY09881.1|EAY09882.1|EAY09893.1|EAY09898.1|EAY09899.1|EAY09901.1|EAY09905.1|EAY09911.1|EAY09913.1|EAY09917.1|EAY09919.1|EAY09920.1|EAY09921.1|EAY09922.1|EAY09923.1|EAY09924.1|EAY09925.1|EAY09928.1|EAY09932.1|EAY09934.1|EAY09946.1|EAY09947.1|EAY09949.1|EAY09950.1|EAY09952.1|EAY09953.1|EAY09954.1|EAY09959.1|EAY09961.1|EAY09970.1|EAY09974.1|EAY09977.1|EAY09978.1|EAY09982.1|EAY09984.1|EAY09987.1|EAY09989.1|EAY09991.1|EAY10009.1|EAY10014.1|EAY10029.1|EAY10030.1|EAY10031.1|EAY10032.1|EAY10037.1|EAY10038.1|EAY10042.1|EAY10043.1|EAY10049.1|EAY10050.1|EAY10051.1|EAY10056.1|EAY10057.1|EAY10064.1|EAY10065.1|EAY10071.1|EAY10078.1|EAY10083.1|EAY10084.1|EAY10094.1|EAY10098.1|EAY10103.1|EAY10104.1|EAY10109.1|EAY10110.1|EAY10113.1|EAY10116.1|EAY10117.1|EAY10120.1|EAY10122.1|EAY10123.1|EAY10124.1|EAY10131.1|EAY10138.1|EAY10141.1|EAY10142.1|EAY10145.1|EAY10146.1|EAY10150.1|EAY10152.1|EAY10153.1|EAY10155.1|EAY10156.1|EAY10160.1|EAY10166.1|EAY10169.1|EAY10170.1|EAY10176.1|EAY10181.1|EAY10182.1|EAY10185.1|EAY10186.1|EAY10187.1|EAY10189.1|EAY10192.1|EAY10193.1|EAY10207.1|EAY10208.1|EAY10224.1|EAY10227.1|EAY10229.1|EAY10232.1|EAY10242.1|EAY10243.1|EAY10244.1|EAY10247.1|EAY10251.1|EAY10252.1|EAY10253.1|EAY10263.1|EAY10267.1|EAY10269.1|EAY10280.1|EAY10281.1|EAY10282.1|EAY10284.1|EAY10287.1|EAY10296.1|EAY10298.1|EAY10305.1|EAY10308.1|EAY10313.1|EAY10314.1|EAY10316.1|EAY10323.1|EAY10325.1|EAY10332.1|EAY10333.1|EAY10348.1|EAY10349.1|EAY10351.1|EAY10354.1|EAY10359.1|EAY10363.1|EAY10366.1|EAY10367.1|EAY10378.1|EAY10380.1|EAY10381.1|EAY10408.1|EAY10418.1|EAY10421.1|EAY10425.1|EAY10426.1|EAY10431.1|EAY10437.1|EAY10441.1|EAY10443.1|EAY10444.1|EAY10447.1|EAY10451.1|EAY10457.1|EAY10462.1|EAY10465.1|EAY10470.1|EAY10471.1|EAY10475.1|EAY10476.1|EAY10483.1|EAY10489.1|EAY10490.1|EAY10493.1|EAY10494.1|EAY10501.1|EAY10503.1|EAY10504.1|EAY10514.1|EAY10524.1|EAY10535.1|EAY10537.1|EAY10539.1|EAY10540.1|EAY10544.1|EAY10547.1|EAY10549.1|EAY10553.1|EAY10556.1|EAY10560.1|EAY10561.1|EAY10563.1|EAY10571.1|EAY10573.1|EAY10574.1|EAY10589.1|EAY10593.1|EAY10598.1|EAY10603.1|EAY10604.1|EAY10609.1|EAY10610.1|EAY10611.1|EAY10612.1|EAY10633.1|EAY10638.1|EAY10639.1|EAY10642.1|EAY10649.1|EAY10653.1|EAY10654.1|EAY10655.1|EAY10659.1|EAY10664.1|EAY10669.1|EAY10673.1|EAY10678.1|EAY10683.1|EAY10694.1|EAY10695.1|EAY10704.1|EAY10705.1|EAY10707.1|EAY10709.1|EAY10711.1|EAY10713.1|EAY10715.1|EAY10717.1|EAY10719.1|EAY10720.1|EAY10725.1|EAY10726.1|EAY10731.1|EAY10742.1|EAY10749.1|EAY10752.1|EAY10756.1|EAY10757.1|EAY10765.1|EAY10766.1|EAY10774.1|EAY10775.1|EAY10783.1|EAY10785.1|EAY10786.1|EAY10789.1|EAY10790.1|EAY10791.1|EAY10792.1|EAY10795.1|EAY10797.1|EAY10800.1|EAY10802.1|EAY10803.1|EAY10806.1|EAY10809.1|EAY10811.1|EAY10816.1|EAY10817.1|EAY10818.1|EAY10820.1|EAY10822.1|EAY10823.1|EAY10824.1|EAY10825.1|EAY10826.1|EAY10832.1|EAY10833.1|EAY10834.1|EAY10836.1|EAY10838.1|EAY10845.1|EAY10849.1|EAY10859.1|EAY10865.1|EAY10867.1|EAY10877.1|EAY10878.1|EAY10879.1|EAY10884.1|EAY10889.1|EAY10902.1|EAY10905.1|EAY10911.1|EAY10913.1|EAY10915.1|EAY10920.1|EAY10922.1|EAY10934.1|EAY10935.1|EAY10937.1|EAY10941.1|EAY10942.1|EAY10947.1|EAY10949.1|EAY10950.1|EAY10951.1|EAY10956.1|EAY10962.1|EAY10971.1|EAY10972.1|EAY10974.1|EAY10983.1|EAY10988.1|EAY11005.1|EAY11007.1|EAY11009.1|EAY11010.1|EAY11012.1|EAY11013.1|EAY11015.1|EAY11030.1|EAY11031.1|EAY11036.1|EAY11038.1|EAY11053.1|EAY11055.1|EAY11058.1|EAY11067.1|EAY11072.1|EAY11078.1|EAY11081.1|EAY11083.1|EAY11090.1|EAY11093.1|EAY11101.1|EAY11108.1|EAY11121.1|EAY11126.1|EAY11127.1|EAY11128.1|EAY11134.1|EAY11136.1|EAY11143.1|EAY11145.1|EAY11147.1|EAY11155.1|EAY11174.1|EAY11188.1|EAY11191.1|EAY11195.1|EAY11197.1|EAY11198.1|EAY11217.1|EAY11219.1|EAY11220.1|EAY11224.1|EAY11229.1|EAY11232.1|EAY11247.1|EAY11254.1|EAY11265.1|EAY11268.1|EAY11272.1|EAY11273.1|EAY11276.1|EAY11279.1|EAY11281.1|EAY11289.1|EAY11290.1|EAY11298.1|EAY11300.1|EAY11302.1|EAY11314.1|


BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07008.1 Variant SH3 domain containing protein
[Trichomonas vaginalis G3]
         (327 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_810389   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   4.9  
XP_001349036  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   5.3  
XP_828095  VSG  (Establishment)  [Trypanosoma brucei]                  25   6.8  

>EAY07008.1 on XP_810389   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 754

 Score = 25.4 bits (54), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 5/71 (7%)

Query: 125 NAAKYYETATGIAKSRETFSILDNLDNQY--IHGNQSHSSYMTLLQTII-EVEDATKADL 181
           N   ++ + T   K  + F +L   D ++  I GN+++S Y T L+ ++ +V + T +  
Sbjct: 182 NRVDFFYSPTTTTKGNKVF-LLSGSDYEHKEIVGNRTYSGYKTKLELVVGDVREPTSSKP 240

Query: 182 NEQEKLLGQIK 192
            E+ K  GQI+
Sbjct: 241 TERIK-WGQIR 250



>EAY07008.1 on XP_001349036  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2192

 Score = 25.4 bits (54), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 49/113 (43%), Gaps = 9/113 (7%)

Query: 108  KQKVSNNIKQNMYTLRKNAA--KYYETATGIAKSRETFSILDNLDNQYIHGNQSHSSY-- 163
            KQK+S+ IK +  +  +N    K    +  I +    ++ L NL  Q   GN S  SY  
Sbjct: 1531 KQKISHCIKNSDGSKCENKCNDKCNCASKWIDEKSTEWTNLKNLYLQQYGGNDSGESYPV 1590

Query: 164  MTLLQTIIEVEDATKADLNEQEKLLGQIKETEASIIEKSCQTISTGLPFLKDI 216
             T+LQ +       K +LN+  K  G + + E S       +   G P  KDI
Sbjct: 1591 KTILQEL-----QPKTELNKAIKPCGDLHQFEESRHCNGAASSENGKPQKKDI 1638



>EAY07008.1 on XP_828095  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 517

 Score = 25.0 bits (53), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 13/51 (25%), Positives = 27/51 (52%), Gaps = 2/51 (3%)

Query: 104 LTSSKQKVSNNIKQNMYTLRKNAAKYYETA--TGIAKSRETFSILDNLDNQ 152
           +++S  ++S  + + +Y +      + +TA  TG AK+ +  S    +DNQ
Sbjct: 176 ISASNAELSKKLNKALYGVETGRGDFGKTAGATGAAKTLDACSTAGTIDNQ 226




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07012.1 hypothetical protein TVAG_174820 [Trichomonas
vaginalis G3]
         (151 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_845069  VSG  (Establishment)  [Trypanosoma brucei]                  27   0.75 
XP_829794  VSG  (Establishment)  [Trypanosoma brucei]                  26   0.80 
XP_804330   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   4.7  

>EAY07012.1 on XP_845069  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 477

 Score = 26.6 bits (57), Expect = 0.75,   Method: Composition-based stats.
 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 10/45 (22%)

Query: 107 VDASEITGNKQID---------EEIKKRQIDTIRKALKEADYNIP 142
           V A E    KQID         EE+K+R++D +RK   EA+ N P
Sbjct: 336 VSARESGCTKQIDLFQLTTRQMEEVKERRLDQLRKTKTEAE-NYP 379



>EAY07012.1 on XP_829794  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 476

 Score = 26.2 bits (56), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 2/39 (5%)

Query: 2   NDEKIK--VYIQYNGKDAHYDIPSDAKVQTVIDHLTQEF 38
           NDE ++  V I+  G  A YD  SD++ + + D +   F
Sbjct: 303 NDEGVRKAVLIELQGPAAKYDASSDSQKKAITDGIKAMF 341



>EAY07012.1 on XP_804330   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 910

 Score = 24.3 bits (51), Expect = 4.7,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 18/35 (51%)

Query: 50  TTLLSHADPVSKYKTDKENPLIVADIPSGLPPREE 84
           TT  S  +P++   T +  P + +  P+G  P E+
Sbjct: 706 TTTSSSVEPLTTSVTTETQPTVPSPTPAGPQPTEQ 740




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07015.1 Dynein heavy chain family protein
[Trichomonas vaginalis G3]
         (4089 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_804800   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           33   0.52 
XP_001609040  variant erythrocyte surface antigen-1, alpha subun...    32   1.0  
XP_810953   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           32   1.3  
XP_001609935  variant erythrocyte surface antigen-1, alpha subun...    31   1.7  
XP_813606   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           31   1.9  
XP_829790  VSG  (Establishment)  [Trypanosoma brucei]                  30   3.4  
XP_809062   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   5.5  
XP_829782  VSG  (Establishment)  [Trypanosoma brucei]                  29   5.9  
XP_966305  PfEMP1  (Establishment)  [Plasmodium falciparum]            29   6.8  

>EAY07015.1 on XP_804800   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 940

 Score = 32.7 bits (73), Expect = 0.52,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 20/141 (14%)

Query: 26  SHKLGKLNPDEAVKIPKIGEWNLGQ-TKVAPDEK---DLDILNQPVDMGPLDPLQNAPP- 80
           S ++G LNP++A   P++ E   G  ++ +PD +   DL +LN    +G      +AP  
Sbjct: 726 SEEIGALNPNKAPTTPQVPENAQGTLSQSSPDGQPPPDLKLLNGNEGVGGGSTSTSAPST 785

Query: 81  -----------ISAIIDFNPKKPKTIRANSRFDAPYKIKAPPPVTEPLYTGGQAPKSFPA 129
                      I    + +P   KT+   S  +    ++A    T P    G  P   PA
Sbjct: 786 VTTSLGKEQSTIQLSSETSPGGTKTVDGGSSSNGDQTVEAEAGDTVP----GDRPPQAPA 841

Query: 130 GTTSSDISQIMVSKTKQAPKP 150
           GT ++  +    +  K+   P
Sbjct: 842 GTPATADANTPTATGKRKVDP 862



>EAY07015.1 on XP_001609040  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1335

 Score = 32.0 bits (71), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 67/140 (47%), Gaps = 30/140 (21%)

Query: 2668 KIEKTRNQIQELSKQLDIDIPILKNKQKNVEDLIKDLQKKQADVEQTRTAIKEQSEKAEV 2727
            ++EK + +  ++ K+ D   PI+KN    ++ L++ + +    +   + A++ + +    
Sbjct: 635  RVEKVKGETLKMMKESD---PIVKN----LKALLEAIGQVVVQLGNAQEALEGKDK---- 683

Query: 2728 EATAAAEANKIAQEKLNEAKPILQGAQDAIDMIDRDSIVNIKQLKKIHPALRE----AFE 2783
                  EA K  +EKL EAK  L  A++ +D + +D +    +LK+    L E       
Sbjct: 684  ------EAIKKVKEKLTEAKGALGKAKEGLDQV-KDGLNGQAELKEAKGKLGELTNGGKG 736

Query: 2784 AICILFGRQPRKVDSG-TPG 2802
            A+ IL       VDSG TPG
Sbjct: 737  ALHIL-------VDSGNTPG 749



>EAY07015.1 on XP_810953   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 958

 Score = 31.6 bits (70), Expect = 1.3,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 55/139 (39%), Gaps = 9/139 (6%)

Query: 2680 SKQLDIDIPILKNKQKNVEDLIKDLQKKQADVEQTRTAIKEQSEKAEVEATAAAEANKIA 2739
            +K +D D P + +KQ  +E         Q   EQ      E +    +  +AA+ A    
Sbjct: 749  AKTVDGDTPPVVSKQATLETETPSSHVGQQQTEQGSLRTSENAGSGGLSTSAASPARNSP 808

Query: 2740 QEKLNEAKPILQGAQDAIDMIDRDSIVNIKQLKKIHPALREAFEAICILFGRQPRKVDSG 2799
              K +E +  L  + +    +D DS     Q            EA+ ++ G + +++ +G
Sbjct: 809  AAKESEDQSALGASPEGYSNVDVDSSSEGGQTVDA--------EAVDMVQGDETQQLSAG 860

Query: 2800 TPGVKTEDYWPEALVLLND 2818
            TP     +  P A  + +D
Sbjct: 861  TPATADTNA-PTAETMAHD 878



>EAY07015.1 on XP_001609935  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1317

 Score = 31.2 bits (69), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 5/104 (4%)

Query: 2665 GIEKIEKTRN-QIQELSKQLDIDIPILKNKQKNVEDLIKD-LQKKQADVEQTRTAIKEQS 2722
            G + +E  R  +++E+ K LD  +  L+N  K  E +  D ++K +A +      + +  
Sbjct: 648  GCDPMEHDRKCRVKEMGKGLDGVVKKLEN-VKVTEGIKADGIEKAKALLVAIGNVVVQLG 706

Query: 2723 EKAE-VEATAAAEANKIAQEKLNEAKPILQGAQDAIDMIDRDSI 2765
               E +E     E NK+ + KL EAK  L GA+  +D ++ + +
Sbjct: 707  NAQEALEGKKTDEINKV-KTKLTEAKGKLDGAKGGLDRVNGNGL 749



>EAY07015.1 on XP_813606   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 930

 Score = 30.8 bits (68), Expect = 1.9,   Method: Composition-based stats.
 Identities = 45/156 (28%), Positives = 70/156 (44%), Gaps = 37/156 (23%)

Query: 2671 KTRNQIQELSKQLDIDIPILKNKQKNVEDLIKDLQKKQADVEQTRTAIKEQSEKAEVEAT 2730
            KT N  +E+ K+   +  +L+      ED  KD QKK+ DV +  TA+K     +++   
Sbjct: 130  KTANTPEEVLKKPKGETRVLE------EDASKD-QKKKVDVSRPTTAVK----GSDIYML 178

Query: 2731 AAAEANKIAQEKLNEAKPILQGAQDAID---MIDRDSI----VNIKQLKKIHPALREAFE 2783
            A A ++K+       A P   GA DA     ++ + S+     N K++       ++   
Sbjct: 179  AGAYSSKV-------ATPGQVGASDATQLGLLLVKGSVSGEDANNKKID-----WKDTES 226

Query: 2784 AICILFGRQP----RKVDSGTPGVKTEDYWPEALVL 2815
            +   LFG QP    R + SG  GVK  D   E LV 
Sbjct: 227  SPQGLFGTQPDSWTRLIGSGGSGVKMHD---ETLVF 259



>EAY07015.1 on XP_829790  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 468

 Score = 30.0 bits (66), Expect = 3.4,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)

Query: 262 EMEFRLNSRINQMPTTDLPELPDQEISKITDLAKKRTTKEYPKLLNNLSTEIKDEYKR 319
           E+E R    INQ+P TD  +  +++ +K  ++ K+      PK   N   E KD  K+
Sbjct: 377 ELELRAKKIINQLPKTDPKQKQEEDEAKCNNIDKEPECTATPKCKWN--AEAKDPKKK 432



>EAY07015.1 on XP_809062   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 930

 Score = 29.3 bits (64), Expect = 5.5,   Method: Composition-based stats.
 Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 31/153 (20%)

Query: 2671 KTRNQIQELSKQLDIDIPILKNKQKNVEDLIKDLQKKQADVEQTRTAIKEQSEKAEVEAT 2730
            KT N  +E+ K+     P  K + + +E+   + QKK+ DV +  TA+K     +++   
Sbjct: 130  KTANTPEEVLKK-----P--KGETRVLEEGASEDQKKKVDVSRPTTAVK----GSDIYML 178

Query: 2731 AAAEANKIAQEKLNEAKPILQGAQDA--IDMIDRDSIVNIKQL--KKIHPALREAFEAIC 2786
            A A ++K+       A P   GA DA  + ++     VN +    KKI   + E+     
Sbjct: 179  AGAYSSKV-------ATPGQVGASDATQLGLLLVKGSVNSEDANNKKIDWKVTESPPQ-- 229

Query: 2787 ILFGRQP----RKVDSGTPGVKTEDYWPEALVL 2815
             LFG QP    + + SG  GVK  D   E LV 
Sbjct: 230  RLFGTQPDSWTKLIGSGGSGVKMHD---ETLVF 259



>EAY07015.1 on XP_829782  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 497

 Score = 29.3 bits (64), Expect = 5.9,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 7/94 (7%)

Query: 1663 PEKYIPDDFKEAIEESFRKNEAFPDSK-LVRKAMDVYDTMSQRQGTMLVGRALSGKSVTW 1721
            PE   P+  ++AI E+        + K L+ K   V +TM+ +    L+G+A+   +   
Sbjct: 292  PESTCPETTEKAISEALTTTTIKAEVKDLLIKLGKVTNTMADQAARSLIGQAVKDDNAAS 351

Query: 1722 KSLRDAMNKLSEKDEKFKVSVKSMNPKAVTISEL 1755
             +  + +NKL  K       +    PK V I  L
Sbjct: 352  TARVNQVNKLKVK------KIDGGKPKEVKIETL 379



>EAY07015.1 on XP_966305  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3954

 Score = 29.3 bits (64), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 11/88 (12%)

Query: 2241 HDLSVKELIRPTVA--ATIDIYLEISKTLLPVPSKPHYIFGLRNIVRVIKGIVLSPSHEI 2298
            H  S  +LI  T++  A IDIY E+ K       K + +FG  ++       V   ++  
Sbjct: 3707 HPYSGIDLINDTLSGNAHIDIYDELLK------RKENELFGTNHVKHTSTHSVAKHTNSD 3760

Query: 2299 P--KDIDFMHLWWHEMHREFYDRFNTEE 2324
            P    ++  H W  + HR+  +++NT+E
Sbjct: 3761 PIHNQLNLFHTWL-DRHRDMCEKWNTKE 3787




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07018.1 low molecular weight phosphotyrosine protein
phosphatase, putative [Trichomonas vaginalis G3]
         (146 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_843646  VSG  (Establishment)  [Trypanosoma brucei]                  25   1.9  
AAC48311  TRAP C-1  (Adhesin)  [Cryptosporidium parvum]                23   5.6  

>EAY07018.1 on XP_843646  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 526

 Score = 25.0 bits (53), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 85  DQSIYNELKDMMPAKSKSKLVLFNAPRGI 113
           DQS+Y +  +  P K  S  V   A RGI
Sbjct: 179 DQSVYGDKPEAHPGKQASAAVRRTATRGI 207



>EAY07018.1 on AAC48311  TRAP C-1  (Adhesin)  [Cryptosporidium parvum]
          Length = 255

 Score = 23.5 bits (49), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 9/35 (25%)

Query: 65  HVARTIKKNDWQ---------TFDVIAALDQSIYN 90
           + A T+KKN WQ          + V     +S+YN
Sbjct: 82  NTAYTVKKNSWQECANQCYWSKYTVFGNCQRSVYN 116




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07019.1 surface antigen BspA-like [Trichomonas
vaginalis G3]
         (620 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAA21303  gp82  (Adhesin)  [Trypanosoma cruzi]                         26   1.7  
XP_001351517  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   2.3  

>EAY07019.1 on AAA21303  gp82  (Adhesin)  [Trypanosoma cruzi]
          Length = 70

 Score = 25.8 bits (55), Expect = 1.7,   Method: Composition-based stats.
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 4/46 (8%)

Query: 172 GAHTGNCGGGGRGGWYGGGTYRG-SQTK---PTKGISNCYNSGGSG 213
           G  T    GG   GW   GT    +QT    P  G+ + Y+SGGSG
Sbjct: 20  GEVTKPSAGGEPSGWITWGTPTSLNQTTLKIPKAGLKDFYSSGGSG 65



>EAY07019.1 on XP_001351517  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2193

 Score = 27.7 bits (60), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 23/55 (41%), Gaps = 17/55 (30%)

Query: 134 GGGGGATGG-------ERGYYGGGLT----------GGGNSATQNSSSNGGDFFQ 171
           GG  GATGG        R  Y GGLT           GG+ ATQ    NGG   Q
Sbjct: 937 GGKDGATGGSVCVPPRRRKLYVGGLTKWAEIQLKSQAGGDKATQEGDGNGGSETQ 991




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07022.1 hypothetical protein TVAG_174920 [Trichomonas
vaginalis G3]
         (77 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_815493   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   0.33 
XP_807173   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   2.5  
AAN87596  CSP  (Invasion)  [Plasmodium falciparum]                     22   4.1  
ABB59600  CSP  (Invasion)  [Plasmodium falciparum]                     22   4.2  
AAN87597  CSP  (Invasion)  [Plasmodium falciparum]                     22   4.3  
ABB59595  CSP  (Invasion)  [Plasmodium falciparum]                     22   4.3  
AAN87598  CSP  (Invasion)  [Plasmodium falciparum]                     22   4.8  
AAA29574  CSP  (Invasion)  [Plasmodium falciparum]                     22   7.9  
ABB59602  CSP  (Invasion)  [Plasmodium falciparum]                     21   9.1  

>EAY07022.1 on XP_815493   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 706

 Score = 25.4 bits (54), Expect = 0.33,   Method: Composition-based stats.
 Identities = 8/15 (53%), Positives = 12/15 (80%)

Query: 50  NWGDPKDDIKYINDH 64
           NWG+PK  +K+I +H
Sbjct: 202 NWGEPKSLLKHIPNH 216



>EAY07022.1 on XP_807173   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 734

 Score = 23.1 bits (48), Expect = 2.5,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 15/24 (62%), Gaps = 2/24 (8%)

Query: 50  NWGDPKDDIKYINDHEPQEDELEE 73
           NWG+PK  +K +  H   +D+L +
Sbjct: 238 NWGEPKSLLKQVPKH--TQDQLRD 259



>EAY07022.1 on AAN87596  CSP  (Invasion)  [Plasmodium falciparum]
          Length = 360

 Score = 22.3 bits (46), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 5/43 (11%)

Query: 34  GNGRRDKTKRQGNGAGNWGDPKDDIKYINDHEPQEDELEEKAE 76
           GNG + + K      G+ G PKD++ Y ND E +  ++E+ + 
Sbjct: 302 GNGIQVRIK-----PGSAGKPKDELDYANDIEKKICKMEKCSS 339



>EAY07022.1 on ABB59600  CSP  (Invasion)  [Plasmodium falciparum]
          Length = 77

 Score = 21.9 bits (45), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 5/42 (11%)

Query: 34 GNGRRDKTKRQGNGAGNWGDPKDDIKYINDHEPQEDELEEKA 75
          GNG + + K      G+ G PKD++ Y ND E +  ++E+ +
Sbjct: 36 GNGIQVRIK-----PGSAGKPKDELNYENDIEKKICKMEKCS 72



>EAY07022.1 on AAN87597  CSP  (Invasion)  [Plasmodium falciparum]
          Length = 360

 Score = 22.3 bits (46), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 5/43 (11%)

Query: 34  GNGRRDKTKRQGNGAGNWGDPKDDIKYINDHEPQEDELEEKAE 76
           GNG + + K      G+ G PKD++ Y ND E +  ++E+ + 
Sbjct: 302 GNGIQVRIK-----PGSAGKPKDELDYANDIEKKICKMEKCSS 339



>EAY07022.1 on ABB59595  CSP  (Invasion)  [Plasmodium falciparum]
          Length = 77

 Score = 21.9 bits (45), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 5/42 (11%)

Query: 34 GNGRRDKTKRQGNGAGNWGDPKDDIKYINDHEPQEDELEEKA 75
          GNG + + K      G+ G PKD++ Y ND E +  ++E+ +
Sbjct: 36 GNGIQVRIK-----PGSAGKPKDELNYENDIEKKICKMEKCS 72



>EAY07022.1 on AAN87598  CSP  (Invasion)  [Plasmodium falciparum]
          Length = 412

 Score = 22.3 bits (46), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 5/43 (11%)

Query: 34  GNGRRDKTKRQGNGAGNWGDPKDDIKYINDHEPQEDELEEKAE 76
           GNG + + K      G+ G PKD++ Y ND E +  ++E+ + 
Sbjct: 354 GNGIQVRIK-----PGSAGKPKDELDYANDIEKKICKMEKCSS 391



>EAY07022.1 on AAA29574  CSP  (Invasion)  [Plasmodium falciparum]
          Length = 420

 Score = 21.6 bits (44), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 5/43 (11%)

Query: 34  GNGRRDKTKRQGNGAGNWGDPKDDIKYINDHEPQEDELEEKAE 76
           GNG + + K      G+ G PKD+++Y ND E +  ++E+ + 
Sbjct: 362 GNGIQVRIK-----PGSAGKPKDELEYENDIEKKICKMEKCSS 399



>EAY07022.1 on ABB59602  CSP  (Invasion)  [Plasmodium falciparum]
          Length = 77

 Score = 20.8 bits (42), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 5/42 (11%)

Query: 34 GNGRRDKTKRQGNGAGNWGDPKDDIKYINDHEPQEDELEEKA 75
          GNG + + K      G+ G PKD++ Y ND E +  ++E+ +
Sbjct: 36 GNGIQVRIK-----PGSAGKPKDELDYENDIEKKICKMEKCS 72




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07033.1 Flavodoxin-like fold family protein
[Trichomonas vaginalis G3]
         (240 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609533  variant erythrocyte surface antigen-1, alpha subun...    28   0.56 
XP_001611206  variant erythrocyte surface antigen-1, alpha subun...    27   1.1  
XP_001609163  variant erythrocyte surface antigen-1, alpha subun...    27   1.5  
XP_001608796  variant erythrocyte surface antigen-1, alpha subun...    27   1.5  
XP_001609751  variant erythrocyte surface antigen-1, alpha subun...    26   2.0  
XP_001610196  variant erythrocyte surface antigen-1, alpha subun...    26   2.3  
XP_656181  Hgl2  (Adhesin)  [Entamoeba histolytica]                    25   6.5  
XP_001610497  variant erythrocyte surface antigen-1, alpha subun...    25   6.7  
XP_001609618  variant erythrocyte surface antigen-1, alpha subun...    24   7.8  
XP_001611900  variant erythrocyte surface antigen-1, alpha subun...    24   7.9  

>EAY07033.1 on XP_001609533  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1162

 Score = 28.1 bits (61), Expect = 0.56,   Method: Composition-based stats.
 Identities = 12/27 (44%), Positives = 13/27 (48%)

Query: 151 MFFDPKKGNGLDAYLWSAMYGFNYAGF 177
           M  D   GN LDA +W    G  Y GF
Sbjct: 314 MLNDAGPGNRLDAVIWDGFRGMLYLGF 340



>EAY07033.1 on XP_001611206  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1285

 Score = 26.9 bits (58), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 4/50 (8%)

Query: 151 MFFDPKKGNGLDAYLWSAMYGFNYAGFTILRSLGIYGANSPRRKAMQPEL 200
           M  D   GN  DA +W  + G  + GFT     G    N+    A QP L
Sbjct: 324 MLNDSGPGNRWDAIIWDGLLGKLFLGFTHPSGSGANDGNT----AKQPTL 369



>EAY07033.1 on XP_001609163  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1360

 Score = 26.6 bits (57), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 18/41 (43%)

Query: 158 GNGLDAYLWSAMYGFNYAGFTILRSLGIYGANSPRRKAMQP 198
           GN LDA +W  + G  Y GF        +G++       QP
Sbjct: 357 GNRLDAIIWDGIRGMLYLGFPHTSYNAAHGSDHDDNTFRQP 397



>EAY07033.1 on XP_001608796  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1261

 Score = 26.6 bits (57), Expect = 1.5,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 13/90 (14%)

Query: 91  WSTHVLIFAPLWFGRLPACFYSFSERVFSFGFAYDGESPLHQNVLKGRKVAIIVSAGVAP 150
           W+ H+L  + L  G       S S+ + + GF  D    L+    K R   +I    +  
Sbjct: 293 WNNHILDGSSLDDG-------SLSQWLQALGFPKD---MLNDKGPKNRLDQVIWDGFMGK 342

Query: 151 MFF---DPKKGNGLDAYLWSAMYGFNYAGF 177
           +F     PK  N +D       Y  NYAGF
Sbjct: 343 LFLGFTHPKGSNAVDGNTAKQPYDMNYAGF 372



>EAY07033.1 on XP_001609751  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1298

 Score = 26.2 bits (56), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/20 (50%), Positives = 12/20 (60%)

Query: 158 GNGLDAYLWSAMYGFNYAGF 177
           GN LDA +W  + G  Y GF
Sbjct: 324 GNRLDAVIWDGIRGMLYLGF 343



>EAY07033.1 on XP_001610196  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1330

 Score = 26.2 bits (56), Expect = 2.3,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 13/27 (48%)

Query: 151 MFFDPKKGNGLDAYLWSAMYGFNYAGF 177
           M  +   GN LDA +W    G  Y GF
Sbjct: 360 MLNNSGPGNRLDAIIWDGFRGMLYLGF 386



>EAY07033.1 on XP_656181  Hgl2  (Adhesin)  [Entamoeba histolytica]
          Length = 1286

 Score = 24.6 bits (52), Expect = 6.5,   Method: Composition-based stats.
 Identities = 12/22 (54%), Positives = 13/22 (59%)

Query: 202 KKINEKLLKLDQWKTVDGERIY 223
           K + EKL  L Q  TVDG  IY
Sbjct: 231 KSLQEKLSVLSQLTTVDGVTIY 252



>EAY07033.1 on XP_001610497  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1315

 Score = 24.6 bits (52), Expect = 6.7,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 13/27 (48%)

Query: 151 MFFDPKKGNGLDAYLWSAMYGFNYAGF 177
           M  D   GN LDA +W  +    Y GF
Sbjct: 338 MLNDAGPGNRLDAIIWDGLRDKLYLGF 364



>EAY07033.1 on XP_001609618  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1325

 Score = 24.3 bits (51), Expect = 7.8,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 18/41 (43%)

Query: 158 GNGLDAYLWSAMYGFNYAGFTILRSLGIYGANSPRRKAMQP 198
           GN  DA +W  + G  Y GF        +G+++      QP
Sbjct: 371 GNRWDAIIWDGIMGKLYLGFPHTSDNAAHGSDNNDNTFRQP 411



>EAY07033.1 on XP_001611900  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1226

 Score = 24.3 bits (51), Expect = 7.9,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 13/27 (48%)

Query: 151 MFFDPKKGNGLDAYLWSAMYGFNYAGF 177
           M  D   GN  DA +W  + G  Y GF
Sbjct: 364 MMNDHGPGNRWDAIIWDGIMGKLYLGF 390




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07035.1 TKL family protein kinase [Trichomonas
vaginalis G3]
         (963 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    64   1e-11
AAX59907  TaSE  (Establishment)  [Theileria annulata]                  28   2.8  

>EAY07035.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 63.9 bits (154), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 12/147 (8%)

Query: 253 PNVIKLIGVTVTPPF---CIVTTYVPNGCLIDLINGKSINPRCTPIFRMRIALDTARALE 309
           PN+IKL+ +   P      ++  +V N     L    +I      I+++       +A+ 
Sbjct: 108 PNIIKLLDIVKDPQSRTPSLIFEHVNNTDFKTLYPTLTIQDIKYYIYQL------LKAMN 161

Query: 310 YIHSIGLIHRDLKPPNILLDNNDRAI-VCDFGLARIV--SSMMSCEIGTTQWCAPELLTS 366
           Y HS G++HRD+KP N+++D+  + + + D+GLA         S  + T  +  PELL  
Sbjct: 162 YCHSQGIMHRDIKPHNVMIDHEKKILRLIDWGLAEFYHPEQEYSVRVATRYYKGPELLVD 221

Query: 367 GNDYNQSVDVYAYGIMLWELLTQKIPF 393
              Y+ S+D+++ G ML  ++ +K PF
Sbjct: 222 MRYYDYSLDIWSIGCMLAGIIFKKEPF 248



>EAY07035.1 on AAX59907  TaSE  (Establishment)  [Theileria annulata]
          Length = 429

 Score = 28.1 bits (61), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 15/50 (30%), Positives = 25/50 (50%)

Query: 63  LTRLQAEKIVDYIQSCSELANFCQKLTAGKWLGVFLSEPTHSSVNVFSKL 112
           + R+Q  K VDY+    +  N+ +KL   + LG F+ E     + +  KL
Sbjct: 366 IRRVQWYKWVDYMNDTEDKINYIRKLRESECLGEFIHEDQLDPLEIKQKL 415




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07036.1 RasGEF domain containing protein [Trichomonas
vaginalis G3]
         (583 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001349513  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   4.6  

>EAY07036.1 on XP_001349513  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2858

 Score = 26.6 bits (57), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 21/88 (23%), Positives = 41/88 (46%), Gaps = 8/88 (9%)

Query: 413  NVLNILYDTKNYLDAMAILGGLDHNALY--RMKVHFSLLPQSDRDTLEKIRDKFSPDKQF 470
            N  N + +TKN   ++      +HN++     +VH   + +  +D  E + +KF+ D  +
Sbjct: 2305 NYSNFISETKNVYQSLKKQYNDNHNSIKVGGKEVHH-YMKEKCKDKCECLSEKFNSDNNW 2363

Query: 471  AKLRSLFDEAI-----ENKEPALPYIGV 493
             K    FD+ +     + K+P  P + V
Sbjct: 2364 EKPYDTFDDTVLKNKCQCKKPDSPILPV 2391




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07039.1 CAMK family protein kinase [Trichomonas
vaginalis G3]
         (334 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    75   4e-16
XP_001610497  variant erythrocyte surface antigen-1, alpha subun...    27   1.9  
XP_818399   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   3.0  
XP_844693  VSG  (Establishment)  [Trypanosoma brucei]                  25   5.8  

>EAY07039.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 75.1 bits (183), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 17/194 (8%)

Query: 23  YQIIKKIGKGGFAVVVLALDLKTQQKVAIKIIQRKLMDTNENMKYLESELRLHSELDHPN 82
           Y+I++KIG+G F+ V   L+  T+ K  IKI++       +    +   LR       PN
Sbjct: 55  YEIVRKIGRGKFSEVFEGLNTVTKDKCVIKILKPVKKKKIKREIKILQNLR-----GGPN 109

Query: 83  IVKIFDVLYEEE--FIAIIMEYCSNGDMFEHIQCHTMFTFTEQLEIANQLIDALNYMHKK 140
           I+K+ D++ + +    ++I E+ +N D       +   T  +      QL+ A+NY H +
Sbjct: 110 IIKLLDIVKDPQSRTPSLIFEHVNNTDF---KTLYPTLTIQDIKYYIYQLLKAMNYCHSQ 166

Query: 141 GIYHRDIKPENILFDSNFR-PKIIDFGMS----VEEDFCGHSIVGTPIYMAPETFTNQCY 195
           GI HRDIKP N++ D   +  ++ID+G++     E+++     V T  Y  PE   +  Y
Sbjct: 167 GIMHRDIKPHNVMIDHEKKILRLIDWGLAEFYHPEQEYSVR--VATRYYKGPELLVDMRY 224

Query: 196 DVKKIDIWSLGVTL 209
               +DIWS+G  L
Sbjct: 225 YDYSLDIWSIGCML 238



>EAY07039.1 on XP_001610497  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1315

 Score = 26.9 bits (58), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)

Query: 191 TNQCYDVKKIDIWSLGVTLHMLS-AYAYPWNTCSPAQY 227
           +++C  VK+ DI+ LG+  H  S   AYP NT +P  +
Sbjct: 229 SDKCSCVKEKDIYGLGLYGHNDSYTSAYPNNTHNPPTW 266



>EAY07039.1 on XP_818399   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 953

 Score = 26.2 bits (56), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 5/49 (10%)

Query: 203 WSL---GVTLHMLSAYAYPWNTCSPAQYIKNAKQGLVEVIVAAPGVMGD 248
           W L   G TL  LS+   P  TC  A  +KN  QG     V    V+GD
Sbjct: 636 WELSCGGGTLKELSSALEPGKTCQLAIVLKNGSQG--SAYVDGQPVLGD 682



>EAY07039.1 on XP_844693  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 516

 Score = 25.4 bits (54), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 24/103 (23%), Positives = 43/103 (41%), Gaps = 6/103 (5%)

Query: 191 TNQCYDVKKIDIWSLGVTLHMLSAYAYPWNTCSPAQYIKNAKQGLVEVIV----AAPGVM 246
           ++QC D      WS G    ++S       T  PA+Y     + LV+ IV    +A G  
Sbjct: 232 SDQCADPVIAIKWSGGNDQSVISQLKAKCKTLKPAEYTAGDLEALVQRIVGRVRSAKGAG 291

Query: 247 GDLIKMM--LVPDPKERASYEELIVFLNNTRQHQISKQKCNIP 287
            D+I  +  +       A+ +   ++ +++ +H       NIP
Sbjct: 292 NDVIHYLGKVNLGTCTGANSQACAIYASDSGKHSAITGGLNIP 334




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07041.1 hypothetical protein TVAG_311660 [Trichomonas
vaginalis G3]
         (293 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609101  variant erythrocyte surface antigen-1, alpha subun...    33   0.025
XP_001609163  variant erythrocyte surface antigen-1, alpha subun...    27   1.9  
XP_001609450  variant erythrocyte surface antigen-1, alpha subun...    26   2.9  
XP_818394   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   3.3  
XP_808201   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   3.8  
XP_815479   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   5.9  
XP_966305  PfEMP1  (Establishment)  [Plasmodium falciparum]            25   8.6  
XP_817816   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   9.8  

>EAY07041.1 on XP_001609101  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1359

 Score = 32.7 bits (73), Expect = 0.025,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 59/128 (46%), Gaps = 16/128 (12%)

Query: 160 EKIITIELNKLRDQIEQYQRDQKAIDAAQDSIESLIDKLEAYQKTETKVFKFDLDKKLRE 219
           EK++ + L  +   +E  +   KA++  + ++E+  +KLE  +KT+             E
Sbjct: 716 EKVLDVVLGVVEKLVEGVKEKVKALEEIKKTLEAAKEKLEEAKKTQ-------------E 762

Query: 220 APSNAQAHEQALRANISELKKSIVAEAQRL---RNIEARDTENMDELQGIIESQIMQIVE 276
           A   A+   +  +  ++  KK+    +  +   +NI +   + + +   +++  + QI+E
Sbjct: 763 ALEAAKGELEGAKGALTTAKKAFPGSSSDIDPCKNIVSATIDGLHKALQLLKDAVQQIME 822

Query: 277 AVQRLDNE 284
           A ++   E
Sbjct: 823 ATRKDTTE 830



>EAY07041.1 on XP_001609163  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1360

 Score = 26.6 bits (57), Expect = 1.9,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 49/106 (46%), Gaps = 16/106 (15%)

Query: 182 KAIDAAQDSIESLIDKLEAYQKTETKVFKFDLDKKLREAPSNAQAHEQALRANISELKKS 241
           KA++  + ++E+  +KLE  +KT+             EA   A+   +  +  ++  KK+
Sbjct: 738 KALEEIKKTLEAAKEKLEEAKKTQ-------------EALEAAKGELEGAKGALTTAKKA 784

Query: 242 IVAEAQRL---RNIEARDTENMDELQGIIESQIMQIVEAVQRLDNE 284
               +  +   +NI +   + + +   +++  + QI+EA ++   E
Sbjct: 785 FPGSSSDIDPCKNIVSATIDGLHKALQLLKDAVQQIMEATRKDTTE 830



>EAY07041.1 on XP_001609450  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1309

 Score = 26.2 bits (56), Expect = 2.9,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 25/52 (48%)

Query: 4   PNSAIRIRSSINTNREKKNLPGLTRRCLSSTGNKTSKEDIDDMKLQIAKMEL 55
           P+SAI IR S   + + +N P       S TG+  +   I   + Q A++ L
Sbjct: 216 PSSAINIRKSFLKSDKIENPPSWNNLKCSPTGSTINSTTITQRRHQCARILL 267



>EAY07041.1 on XP_818394   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1059

 Score = 25.8 bits (55), Expect = 3.3,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 14/79 (17%)

Query: 60  IKSKTVRMNQEIRDRKSAMSKALNSKTENKTVVVATESTIQQLRENVIALENTLYNTNKE 119
           + S TV     + +   A   A NS++E+            QL E   + + TL   N+ 
Sbjct: 782 VSSSTVAGGSSVPEPAIATEIAGNSRSEDNA----------QLSEGETSQQTTLNEDNES 831

Query: 120 YEQLRVKDSLLQSQELQEE 138
            +    +DS +Q+QELQ E
Sbjct: 832 MQ----RDSEMQTQELQSE 846



>EAY07041.1 on XP_808201   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1044

 Score = 25.8 bits (55), Expect = 3.8,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 14/77 (18%)

Query: 62  SKTVRMNQEIRDRKSAMSKALNSKTENKTVVVATESTIQQLRENVIALENTLYNTNKEYE 121
           S TV     + +  +A   A NS  E+   +   E+  Q           T  N  KE  
Sbjct: 771 SSTVDAESSVHESATAAQSAENSHQEDNAQLSGGETAQQ-----------TTLNEAKESM 819

Query: 122 QLRVKDSLLQSQELQEE 138
           Q   +DS +Q Q+LQ E
Sbjct: 820 Q---RDSYVQPQDLQSE 833



>EAY07041.1 on XP_815479   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1047

 Score = 25.0 bits (53), Expect = 5.9,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 14/63 (22%)

Query: 76  SAMSKALNSKTENKTVVVATESTIQQLRENVIALENTLYNTNKEYEQLRVKDSLLQSQEL 135
           +A   A NS++E+            QL E   + + TL   N+  +    +DS LQ+QEL
Sbjct: 786 TATESAGNSRSEDNA----------QLSEGETSQQATLNEDNESMQ----RDSELQTQEL 831

Query: 136 QEE 138
           Q E
Sbjct: 832 QSE 834



>EAY07041.1 on XP_966305  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3954

 Score = 24.6 bits (52), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 4/51 (7%)

Query: 231  LRANISELK----KSIVAEAQRLRNIEARDTENMDELQGIIESQIMQIVEA 277
            LR +I+ LK    KS  AEA+RL+ +   D   + +      S I  +V+ 
Sbjct: 3165 LRNDINNLKTFICKSAFAEAKRLKKVYKDDNSKLHQAMKYSFSDIGSVVKG 3215




 Score = 24.6 bits (52), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 13/66 (19%), Positives = 36/66 (54%)

Query: 160  EKIITIELNKLRDQIEQYQRDQKAIDAAQDSIESLIDKLEAYQKTETKVFKFDLDKKLRE 219
            E+++T++        EQ + ++K   +A +  ++ I+K + Y   ++K + +D+   + +
Sbjct: 1554 EQLVTLQEACPNGICEQSEEEKKKCKSACEKYQAFIEKWKGYYDKQSKKYFYDISTGMYK 1613

Query: 220  APSNAQ 225
              S+A+
Sbjct: 1614 DNSSAK 1619



>EAY07041.1 on XP_817816   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 912

 Score = 24.3 bits (51), Expect = 9.8,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 15  NTNREKKNLPGLTRRCLSSTGNKTSKEDIDDMKLQIAKME 54
           +T RE+ +  G++   L  TG + SKE +D  KL    +E
Sbjct: 114 DTKREEGSFTGISSELLEWTGEQASKE-LDKTKLNTQLLE 152




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07045.1 hypothetical protein TVAG_311700 [Trichomonas
vaginalis G3]
         (369 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001352170  MSP1  (Invasion)  [Plasmodium falciparum]                29   0.57 
XP_829775  VSG  (Establishment)  [Trypanosoma brucei]                  28   0.60 
XP_001348165  RESA  (Others)  [plasmodium falciparum]                  26   4.9  
XP_001609163  variant erythrocyte surface antigen-1, alpha subun...    25   7.2  

>EAY07045.1 on XP_001352170  MSP1  (Invasion)  [Plasmodium falciparum]
          Length = 1720

 Score = 28.9 bits (63), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 12/67 (17%)

Query: 30   VKKRVLKQFMDIQNMDKQIEAIKQQLPLNLN-----------KMLLQIRQETQRLIETET 78
            + K +  +F D+ N+  Q + +K+Q P N             K LL  +QE  + +E   
Sbjct: 1594 ISKLIEGKFQDMLNIS-QHQCVKKQCPENSGCFRHLDEREECKCLLNYKQEGDKCVENPN 1652

Query: 79   PTISQND 85
            PT ++N+
Sbjct: 1653 PTCNENN 1659



>EAY07045.1 on XP_829775  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 503

 Score = 28.5 bits (62), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 8/58 (13%)

Query: 124 EKSIEELKNTTDPRLDMKIESLRSLLKQHEKRINNKISYLEHEVSKLGIKPTDSGAVN 181
           E++++ LK   +P L +    LR  +  +    N  I+  +H V K+G     SG VN
Sbjct: 101 EQTLQTLKTAAEPALKL----LRGRIANY----NTAIAIADHSVLKIGTTTGSSGTVN 150



>EAY07045.1 on XP_001348165  RESA  (Others)  [plasmodium falciparum]
          Length = 1085

 Score = 25.8 bits (55), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 5/76 (6%)

Query: 81  ISQNDFENYKDLLQNFEEKYMLKADQTISDVTLQIKTTANQSFEKS----IEELKNTTDP 136
           +S ND EN  + L  F E+Y  + +  +S+  L I         K     I +L+     
Sbjct: 632 LSMNDLENKSEHLLKFMEQYQKEREAHVSEYLLNILQPCIAGDSKWNVPIITKLEGLKGS 691

Query: 137 RLDMKI-ESLRSLLKQ 151
           R D+ I ESLR + K 
Sbjct: 692 RFDIPILESLRWIFKH 707



>EAY07045.1 on XP_001609163  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1360

 Score = 25.4 bits (54), Expect = 7.2,   Method: Composition-based stats.
 Identities = 48/204 (23%), Positives = 82/204 (40%), Gaps = 13/204 (6%)

Query: 170 LGIKPTDSGAVNTISRVKRTLVNNSNDLKI---IESKLNDLQRVASK--KAQSSTSPIQT 224
           LG  P +      + +VK  LV      K+   +++ L  +  V  +   AQ        
Sbjct: 632 LGCNPMEHDRKKRVDKVKEGLVGVKESDKLAGGLKTLLEKIGEVVVQLGNAQEELEKSGG 691

Query: 225 NNNITIESLSNFIPKKVVDEPPNLTEPLALLQQVVTEFEKEYSEKLVSLDEKSVSIE--- 281
           N NI + ++         D    L + + ++Q+VV +  +   EK+ +L+E   ++E   
Sbjct: 692 NVNIALAAVKKVSGVNGSDLKGVLEKVIEVVQEVVEKLVEGVKEKVKALEEIKKTLEAAK 751

Query: 282 ESIDELDGMIDDLTAATNEIELHTKETETLCKELTQSISKISSKLNDDSQNLVIQRTALQ 341
           E ++E     + L AA  E+E       T  K    S S I    N  S  +     ALQ
Sbjct: 752 EKLEEAKKTQEALEAAKGELEGAKGALTTAKKAFPGSSSDIDPCKNIVSATIDGLHKALQ 811

Query: 342 -----IQQLSSSTRSDITNLYNKV 360
                +QQ+  +TR D T   + +
Sbjct: 812 LLKDAVQQIMEATRKDTTEFQDAI 835




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07050.1 hypothetical protein TVAG_311750 [Trichomonas
vaginalis G3]
         (720 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_820186   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           35   0.023
XP_808957   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           34   0.031
ABA06445  MSA-2a/b  (Invasion)  [Babesia bovis]                        30   0.58 
XP_815706   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.62 
XP_815707   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.62 
XP_954179  TashAT2  (Establishment)  [Theileria annulata]              29   1.2  
XP_820135   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   1.4  
XP_813237   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   2.2  
XP_954175  TashAT3  (Establishment)  [Theileria annulata]              28   2.5  
XP_001350798  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   3.8  
ABA06449  MSA-2a/b T-2  (Invasion)  [Babesia bovis]                    27   4.3  
AAK07772  MSA-1  (Invasion)  [Babesia bovis]                           27   4.5  
AAK07771  MSA-1  (Invasion)  [Babesia bovis]                           27   4.5  
AAW71459  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]          26   7.7  
AAW71463  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]          26   7.7  
AAW71460  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]          26   8.2  
AAW71461  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]          26   8.4  
AAW71462  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]          26   8.4  
XP_843847  VSG  (Establishment)  [Trypanosoma brucei]                  26   9.6  

>EAY07050.1 on XP_820186   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1133

 Score = 34.7 bits (78), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 6/70 (8%)

Query: 249  PKYDQPKPQ--KEEEPQPEKPKTT----AKPVLLSWKPGDTESSKPKQETPAQTEPPKPE 302
            PK  +PKP   K  EP+P +PK+     A+P     KP + +S++PK   P   EP   E
Sbjct: 957  PKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAE 1016

Query: 303  PKKESKKPAK 312
            PK    KPA+
Sbjct: 1017 PKSAEPKPAE 1026




 Score = 32.3 bits (72), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 99/216 (45%), Gaps = 25/216 (11%)

Query: 249  PKYDQPKP--QKEEEPQPEKPKTTAKPVLLSWKPGDTESSKPKQETPAQTEPPKPEPKKE 306
            PK  +PKP   K  EP+P +PK+ A+P     KP + +S++PK   P   EP   EPK  
Sbjct: 827  PKSAEPKPAESKSAEPKPAEPKS-AEP-----KPAEPKSAEPKPAEPKSAEPKPAEPKSA 880

Query: 307  SKKPAKDSKSGQDQKIASGMERVTPQVVVVPDVLPMASTKAHVDVQNSH---KETSNSSQ 363
              KPA +SKS       +G +   P+        P ++     + +++     E  ++  
Sbjct: 881  EPKPA-ESKS-------AGPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEP 932

Query: 364  KPQRNSNSHKQKKDDDRFRVWTPALEAKKAEQANPAPATEKPKPDQEKQKSRKQKPKKET 423
            KP    NS + K  + +     PA E K AE     P + +PKP + K    K    K  
Sbjct: 933  KPAE-PNSAEPKPAEPKSAEPKPA-EPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSA 990

Query: 424  ENQKQETQKPENSKKPSH-QQERPEPA-PQVAKPKP 457
            E +  E +  E   KP+  +   P+PA P+ A+PKP
Sbjct: 991  EPKPAEPKSAE--PKPAEPKSAEPKPAEPKSAEPKP 1024




 Score = 30.4 bits (67), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 62/146 (42%), Gaps = 21/146 (14%)

Query: 249  PKYDQPKPQ--KEEEPQPEKPKTT----AKPVLLSWKPGDTESSKPKQETPAQTEPPKPE 302
            PK  +PKP   K  EP+P +PK+     A+P     KP + +S++PK   P   EP   E
Sbjct: 967  PKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAE 1026

Query: 303  PKKESKKPAKDSKSGQ--DQKIASGMERVTPQVVVVPDVLPMASTKAHVDVQNSHKETSN 360
            P   +   A++  + Q      + G E VT  +          S+ A  DV  S   +S+
Sbjct: 1027 PNAATSS-AREGTADQPASATFSDGHEAVTSVIF---------SSAAITDVGAS---SSD 1073

Query: 361  SSQKPQRNSNSHKQKKDDDRFRVWTP 386
             +Q       +  Q     +F V TP
Sbjct: 1074 DAQTVGTEGGAVMQADQPTQFSVGTP 1099




 Score = 27.7 bits (60), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 24/51 (47%)

Query: 262 PQPEKPKTTAKPVLLSWKPGDTESSKPKQETPAQTEPPKPEPKKESKKPAK 312
           P    P T A+P     KP + +S+ PK   P   EP   EPK    KPA+
Sbjct: 746 PSGGAPSTPAEPKSAGPKPAEPKSAGPKPAEPKSAEPKPAEPKSAEPKPAE 796



>EAY07050.1 on XP_808957   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1446

 Score = 34.3 bits (77), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 6/75 (8%)

Query: 249  PKYDQPKPQ--KEEEPQPEKPKTT----AKPVLLSWKPGDTESSKPKQETPAQTEPPKPE 302
            PK  +PKP   K  EP+P KPK+     A+P     KP + +S++PK   P   EP   E
Sbjct: 1107 PKSAEPKPAEPKSAEPEPTKPKSAGPKPAEPKSAGPKPAEPKSAEPKPAEPKSAEPKPAE 1166

Query: 303  PKKESKKPAKDSKSG 317
            PK    KPA+   +G
Sbjct: 1167 PKSAEPKPAEPKSAG 1181




 Score = 30.0 bits (66), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 6/75 (8%)

Query: 249  PKYDQPKPQ--KEEEPQPEKPKTT----AKPVLLSWKPGDTESSKPKQETPAQTEPPKPE 302
            PK  +PKP   K  EP+P +PK+     A+P     KP + +S++P+   P   EP   E
Sbjct: 977  PKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPEPAEPKSAEPKPAE 1036

Query: 303  PKKESKKPAKDSKSG 317
            PK    KPA+   +G
Sbjct: 1037 PKSAEPKPAEPKSAG 1051




 Score = 30.0 bits (66), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 8/65 (12%)

Query: 249 PKYDQPKPQ--KEEEPQPEKPKTTAKPVLLSWKPGDTESSKPKQETPAQTEPPKPEPKKE 306
           PK  +PKP   K  EP+P +PK+ A+P     KP + +S++PK   P   EP   EPK  
Sbjct: 877 PKSAEPKPAEPKSAEPEPAEPKS-AEP-----KPAEPKSAEPKPAEPKSAEPKPAEPKSA 930

Query: 307 SKKPA 311
             KPA
Sbjct: 931 GPKPA 935




 Score = 29.3 bits (64), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 6/69 (8%)

Query: 249  PKYDQPKPQ--KEEEPQPEKPKTT----AKPVLLSWKPGDTESSKPKQETPAQTEPPKPE 302
            PK  +PKP   K  EP+P +PK+     A+P     KP + +S++P+   P   EP   E
Sbjct: 1267 PKSAEPKPAEPKSAEPEPTEPKSAGPKPAEPYSAEPKPAEPKSAEPEPTEPKSAEPEPTE 1326

Query: 303  PKKESKKPA 311
            PK    KPA
Sbjct: 1327 PKSAGPKPA 1335



>EAY07050.1 on ABA06445  MSA-2a/b  (Invasion)  [Babesia bovis]
          Length = 274

 Score = 29.6 bits (65), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 21/59 (35%), Gaps = 7/59 (11%)

Query: 230 PYHAPQPQSQVPIQIHTQPPKYDQPKPQKEEEP-------QPEKPKTTAKPVLLSWKPG 281
           P H+P P    P    T  P  D   P    E        QP KP  T KP   S+  G
Sbjct: 201 PAHSPSPTHSSPQGTTTTQPSQDSAAPNTSAESSSGNLNGQPSKPAETPKPTGSSFTFG 259



>EAY07050.1 on XP_815706   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 907

 Score = 30.0 bits (66), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 11/96 (11%)

Query: 385 TPALEAKKAEQANPAPATEKPKPDQEKQKSRKQKPKKETENQKQETQ---------KPEN 435
           TPA  AK  +   P+PAT  P+P  +K  S    P     ++   ++         +PE 
Sbjct: 715 TPA--AKNTQPTVPSPATAGPQPTDQKSLSASSVPSGGALSEPAASRPEEPEPAESRPEE 772

Query: 436 SKKPSHQQERPEPAPQVAKPKPEPVITPEELEKQLN 471
            +    + E PEPA +    +P  V + +     + 
Sbjct: 773 PEPAESRPEEPEPAREGTADQPASVTSSDAASTDVG 808




 Score = 29.6 bits (65), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 23/88 (26%)

Query: 233 APQPQSQVPIQIHTQPP--KYDQPKPQKEEEPQPEKPKTTAKPVLLSWKPGDTESSKPKQ 290
            PQP  Q  +   + P      +P   + EEP+P +                   S+P++
Sbjct: 732 GPQPTDQKSLSASSVPSGGALSEPAASRPEEPEPAE-------------------SRPEE 772

Query: 291 ETPAQTEPPKPEPKKE--SKKPAKDSKS 316
             PA++ P +PEP +E  + +PA  + S
Sbjct: 773 PEPAESRPEEPEPAREGTADQPASVTSS 800




 Score = 26.6 bits (57), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 8/89 (8%)

Query: 240 VPIQIHTQPPKYDQPKPQKEEEPQPEKPKT-TAKPVLLSWKPGDTESSKPKQETPAQTEP 298
            P   +TQP     P P     PQP   K+ +A  V       +  +S+P++  PA++ P
Sbjct: 715 TPAAKNTQP---TVPSPATAG-PQPTDQKSLSASSVPSGGALSEPAASRPEEPEPAESRP 770

Query: 299 PKPEP---KKESKKPAKDSKSGQDQKIAS 324
            +PEP   + E  +PA++  + Q   + S
Sbjct: 771 EEPEPAESRPEEPEPAREGTADQPASVTS 799



>EAY07050.1 on XP_815707   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 907

 Score = 30.0 bits (66), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 11/96 (11%)

Query: 385 TPALEAKKAEQANPAPATEKPKPDQEKQKSRKQKPKKETENQKQETQ---------KPEN 435
           TPA  AK  +   P+PAT  P+P  +K  S    P     ++   ++         +PE 
Sbjct: 715 TPA--AKNTQPTVPSPATAGPQPTDQKSLSASSVPSGGALSEPAASRPEEPEPAESRPEE 772

Query: 436 SKKPSHQQERPEPAPQVAKPKPEPVITPEELEKQLN 471
            +    + E PEPA +    +P  V + +     + 
Sbjct: 773 PEPAESRPEEPEPAREGTADQPASVTSSDAASTDVG 808




 Score = 29.6 bits (65), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 23/88 (26%)

Query: 233 APQPQSQVPIQIHTQPP--KYDQPKPQKEEEPQPEKPKTTAKPVLLSWKPGDTESSKPKQ 290
            PQP  Q  +   + P      +P   + EEP+P +                   S+P++
Sbjct: 732 GPQPTDQKSLSASSVPSGGALSEPAASRPEEPEPAE-------------------SRPEE 772

Query: 291 ETPAQTEPPKPEPKKE--SKKPAKDSKS 316
             PA++ P +PEP +E  + +PA  + S
Sbjct: 773 PEPAESRPEEPEPAREGTADQPASVTSS 800




 Score = 26.6 bits (57), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 8/89 (8%)

Query: 240 VPIQIHTQPPKYDQPKPQKEEEPQPEKPKT-TAKPVLLSWKPGDTESSKPKQETPAQTEP 298
            P   +TQP     P P     PQP   K+ +A  V       +  +S+P++  PA++ P
Sbjct: 715 TPAAKNTQP---TVPSPATAG-PQPTDQKSLSASSVPSGGALSEPAASRPEEPEPAESRP 770

Query: 299 PKPEP---KKESKKPAKDSKSGQDQKIAS 324
            +PEP   + E  +PA++  + Q   + S
Sbjct: 771 EEPEPAESRPEEPEPAREGTADQPASVTS 799



>EAY07050.1 on XP_954179  TashAT2  (Establishment)  [Theileria annulata]
          Length = 1161

 Score = 28.9 bits (63), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 10/62 (16%)

Query: 400 PATEKPKPDQEKQKS---RKQKPKKETENQKQETQKPENSKKPSHQQERPEPAPQVAKPK 456
           P   KP+P+Q K+K    RKQKP+ E+++ ++ TQ       P  Q++  E + +   P 
Sbjct: 456 PRKHKPEPEQPKRKRGRPRKQKPEPESDHSEESTQ-------PHPQEQETEDSIKALGPS 508

Query: 457 PE 458
           PE
Sbjct: 509 PE 510



>EAY07050.1 on XP_820135   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1519

 Score = 28.9 bits (63), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 11/80 (13%)

Query: 243 QIHTQPPKYDQPKPQ--KEEEPQPEKPKTT---------AKPVLLSWKPGDTESSKPKQE 291
           ++   PPK  +PKP   K  EP+P +PK+          A+P     KP + +S++PK  
Sbjct: 687 KVTIPPPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKPAEPKSAEPKPAEQKSAEPKPA 746

Query: 292 TPAQTEPPKPEPKKESKKPA 311
            P   EP   EPK    KPA
Sbjct: 747 EPKSAEPKPTEPKSAEPKPA 766




 Score = 28.5 bits (62), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 3/80 (3%)

Query: 234  PQPQSQVPIQIHTQPPKYDQPKPQ--KEEEPQPEKPKTTAKPVLLSWKPGDTESSKPKQE 291
            P+P    P +  +  PK  +PKP   K  EP+P + + +A+P     KP + +S++PK  
Sbjct: 1323 PKPAEPKPAEPKSAEPKSAEPKPAEPKSAEPKPAE-QKSAEPKTAEPKPAEPKSAEPKPA 1381

Query: 292  TPAQTEPPKPEPKKESKKPA 311
             P   EP   EPK    KPA
Sbjct: 1382 EPKPAEPKPAEPKSAEPKPA 1401




 Score = 28.1 bits (61), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 51/111 (45%), Gaps = 16/111 (14%)

Query: 235  QPQSQVPIQIHTQP--PKYDQPKP--QKEEEPQPEKPKTTAKPVLLSWKPGDTESSKPKQ 290
            +P+S  P     +P  PK  +PKP  QK  EP+  +PK  A+P     KP + + ++PK 
Sbjct: 1332 EPKSAEPKSAEPKPAEPKSAEPKPAEQKSAEPKTAEPKP-AEPKSAEPKPAEPKPAEPKP 1390

Query: 291  ETPAQTEPPKPEPKKESKKP---------AKDSKSGQDQKIAS--GMERVT 330
              P   EP   EPK    KP         A++  +GQ     S  G E VT
Sbjct: 1391 AEPKSAEPKPAEPKSAEPKPAEPNAATSSAREGTAGQPASATSSDGHEAVT 1441




 Score = 26.2 bits (56), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 96/226 (42%), Gaps = 20/226 (8%)

Query: 249  PKYDQPKPQ--KEEEPQPEKPKTT----AKPVLLSWKPGDTESSKPKQETPAQTEP---- 298
            PK  +PKP   K  EP+P +PK+     A+P     KP + +S++PK   P   EP    
Sbjct: 988  PKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKSAE 1047

Query: 299  PKP-EPKKESKKPAKDSKSGQDQKIASGMERVTPQVVVVPDVLPMASTKAHVDVQNSHKE 357
            PKP EPK    KPA + KS + +          P      +  P     A          
Sbjct: 1048 PKPAEPKPAEPKPA-EQKSAESKPAEQKSAESKPAEQKSAESKPAEPKSAEPKPAEQKSA 1106

Query: 358  TSNSSQKPQRNSNSHKQKKDDDRFRVWTPALEAKKAEQ--ANPAPATEK---PKPDQEKQ 412
             S  +++    S   + K  + +     PA E K AE   A P PA +K   PKP + K 
Sbjct: 1107 ESKPAEQKSAESKPAEPKSAEPKPAEPKPA-EPKPAEPKPAGPKPAEQKSAEPKPTEPKS 1165

Query: 413  KSRKQKPKKETENQKQETQKPENSKKPSHQQERPEPA-PQVAKPKP 457
               K   +K  E++  E  KP   K    +   P+PA P+ A+PKP
Sbjct: 1166 AGPKPAEQKSAESKPAEP-KPAEPKPAGPKPAEPKPAEPKPAEPKP 1210



>EAY07050.1 on XP_813237   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1496

 Score = 28.1 bits (61), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 5/81 (6%)

Query: 235  QPQSQVPIQIHTQP--PKYDQPKPQ--KEEEPQPEKPKTTAKPVLLSWKPGDTESSKPKQ 290
            +P+S  P     +P  PK  +PKP   K  EP+P +PK+ A+P     KP + +S++PK 
Sbjct: 1224 EPKSAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKS-AEPKPAEPKPAEPKSAEPKP 1282

Query: 291  ETPAQTEPPKPEPKKESKKPA 311
              P   EP   EPK    KPA
Sbjct: 1283 AEPKPAEPKSAEPKPAEPKPA 1303




 Score = 27.3 bits (59), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 3/80 (3%)

Query: 234 PQPQSQVPIQIHTQPPKYDQPKPQ--KEEEPQPEKPKTTAKPVLLSWKPGDTESSKPKQE 291
           P+P    P +     PK  +PKP   K  EP+P +PK  A+P     KP + +S++PK  
Sbjct: 835 PKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKP-AEPKPAEPKPAEPKSAEPKPA 893

Query: 292 TPAQTEPPKPEPKKESKKPA 311
            P   EP   EPK    KPA
Sbjct: 894 EPKPAEPKPAEPKPAEPKPA 913




 Score = 26.9 bits (58), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 3/80 (3%)

Query: 234  PQPQSQVPIQIHTQPPKYDQPKPQ--KEEEPQPEKPKTTAKPVLLSWKPGDTESSKPKQE 291
            P+P    P +  +  PK  +PKP   K  EP+P +PK  A+P     KP + +S++PK  
Sbjct: 1145 PKPAEPKPAEPKSAEPKPAEPKPAEPKPVEPKPAEPKP-AEPKPAEPKPAEPKSAEPKPA 1203

Query: 292  TPAQTEPPKPEPKKESKKPA 311
             P   EP   EPK    KPA
Sbjct: 1204 EPKPAEPKPAEPKPAEPKPA 1223




 Score = 26.2 bits (56), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 43/85 (50%), Gaps = 8/85 (9%)

Query: 234  PQPQSQVPIQIHTQPPKYDQPKPQ--KEEEPQPEKPKTTAKPVLLSWKPGDTESSKPKQE 291
            P+P    P +     PK  +PKP   K  EP+P +PK  A+P     KP + +S++PK  
Sbjct: 1105 PKPAEPKPAEPKPAEPKPVEPKPAEPKPAEPKPAEPKP-AEPKPAEPKPAEPKSAEPKPA 1163

Query: 292  TPAQTEP----PKP-EPKKESKKPA 311
             P   EP    PKP EPK    KPA
Sbjct: 1164 EPKPAEPKPVEPKPAEPKPAEPKPA 1188



>EAY07050.1 on XP_954175  TashAT3  (Establishment)  [Theileria annulata]
          Length = 994

 Score = 27.7 bits (60), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 10/62 (16%)

Query: 400 PATEKPKPDQEKQKS---RKQKPKKETENQKQETQKPENSKKPSHQQERPEPAPQVAKPK 456
           P   KP+P+Q K+K    RKQKP+ E+++ ++ TQ       P  Q++  E + +   P 
Sbjct: 438 PRKHKPEPEQPKRKRGRPRKQKPEPESDHSEESTQ-------PHPQEQETEDSIKALGPS 490

Query: 457 PE 458
           PE
Sbjct: 491 PE 492



>EAY07050.1 on XP_001350798  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2359

 Score = 27.3 bits (59), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 15/49 (30%), Positives = 26/49 (53%)

Query: 253  QPKPQKEEEPQPEKPKTTAKPVLLSWKPGDTESSKPKQETPAQTEPPKP 301
            +P+ + E E +   P T+ +    +  P +T   KP++E  A T PP+P
Sbjct: 1841 EPEAEDEGECKAASPATSEEQTNQTSNPHETPVLKPEEEATAPTSPPRP 1889



>EAY07050.1 on ABA06449  MSA-2a/b T-2  (Invasion)  [Babesia bovis]
          Length = 274

 Score = 26.6 bits (57), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 18/59 (30%), Positives = 20/59 (33%), Gaps = 7/59 (11%)

Query: 230 PYHAPQPQSQVPIQIHTQPPKYDQPKPQKEEEP-------QPEKPKTTAKPVLLSWKPG 281
           P H+P P    P    T  P  D   P    E        QP K   T KP   S+  G
Sbjct: 201 PAHSPSPTHSSPQGTTTTQPSQDSAAPNTSAESSSGNLNGQPSKSAETPKPTGSSFTFG 259



>EAY07050.1 on AAK07772  MSA-1  (Invasion)  [Babesia bovis]
          Length = 339

 Score = 26.9 bits (58), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 388 LEAKKAEQANP--APATEKPKPDQEKQKSRKQKPKKETENQKQETQKPENSKKPSHQQER 445
           + AKK  + N    P +    P++      +Q P++ET  Q + T +P+ + +PS     
Sbjct: 213 VTAKKLARVNTFVTPDSLTVPPEELVASIERQTPQQETSAQGETTGQPDTAGQPSSPGSP 272

Query: 446 PEPA 449
            EPA
Sbjct: 273 KEPA 276



>EAY07050.1 on AAK07771  MSA-1  (Invasion)  [Babesia bovis]
          Length = 334

 Score = 26.9 bits (58), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 388 LEAKKAEQANP--APATEKPKPDQEKQKSRKQKPKKETENQKQETQKPENSKKPSHQQER 445
           + AKK  + N    P +    P++      +Q P++ET  Q + T +P+ + +PS     
Sbjct: 213 VTAKKLARVNTFVTPDSLTVPPEELVASIERQTPQQETSAQGETTGQPDTAGQPSSPGSP 272

Query: 446 PEPA 449
            EPA
Sbjct: 273 KEPA 276



>EAY07050.1 on AAW71459  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]
          Length = 448

 Score = 26.2 bits (56), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 39/94 (41%), Gaps = 22/94 (23%)

Query: 518 LEPVYKKIEPIKIQGSLIGEKVVENVLKQTLDFYEGSGIDPV-------NDKEMSFMTAI 570
           LEP+Y   E   I G  +G K          D   GS IDPV       N  + +  T  
Sbjct: 232 LEPIYSGSEFDGILG--LGWK----------DLSIGS-IDPVVVELKKQNKIDNALFTFY 278

Query: 571 ICSKDNKKYVGTVVFASISDDMYQDILLHNKLNH 604
           +   D  K+VG +    I  D Y+  L + KLNH
Sbjct: 279 LPVHD--KHVGYLTIGGIESDFYEGPLTYEKLNH 310



>EAY07050.1 on AAW71463  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]
          Length = 448

 Score = 26.2 bits (56), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 39/94 (41%), Gaps = 22/94 (23%)

Query: 518 LEPVYKKIEPIKIQGSLIGEKVVENVLKQTLDFYEGSGIDPV-------NDKEMSFMTAI 570
           LEP+Y   E   I G  +G K          D   GS IDPV       N  + +  T  
Sbjct: 232 LEPIYSGSEFDGILG--LGWK----------DLSIGS-IDPVVVELKKQNKIDNALFTFY 278

Query: 571 ICSKDNKKYVGTVVFASISDDMYQDILLHNKLNH 604
           +   D  K+VG +    I  D Y+  L + KLNH
Sbjct: 279 LPVHD--KHVGYLTIGGIESDFYEGPLTYEKLNH 310



>EAY07050.1 on AAW71460  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]
          Length = 448

 Score = 26.2 bits (56), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 39/94 (41%), Gaps = 22/94 (23%)

Query: 518 LEPVYKKIEPIKIQGSLIGEKVVENVLKQTLDFYEGSGIDPV-------NDKEMSFMTAI 570
           LEP+Y   E   I G  +G K          D   GS IDPV       N  + +  T  
Sbjct: 232 LEPIYSGSEFDGILG--LGWK----------DLSIGS-IDPVVVELKKQNKIDNALFTFY 278

Query: 571 ICSKDNKKYVGTVVFASISDDMYQDILLHNKLNH 604
           +   D  K+VG +    I  D Y+  L + KLNH
Sbjct: 279 LPVHD--KHVGYLTIGGIESDFYEGPLTYEKLNH 310



>EAY07050.1 on AAW71461  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]
          Length = 448

 Score = 26.2 bits (56), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 39/94 (41%), Gaps = 22/94 (23%)

Query: 518 LEPVYKKIEPIKIQGSLIGEKVVENVLKQTLDFYEGSGIDPV-------NDKEMSFMTAI 570
           LEP+Y   E   I G  +G K          D   GS IDPV       N  + +  T  
Sbjct: 232 LEPIYSGSEFDGILG--LGWK----------DLSIGS-IDPVVVELKKQNKIDNALFTFY 278

Query: 571 ICSKDNKKYVGTVVFASISDDMYQDILLHNKLNH 604
           +   D  K+VG +    I  D Y+  L + KLNH
Sbjct: 279 LPVHD--KHVGYLTIGGIESDFYEGPLTYEKLNH 310



>EAY07050.1 on AAW71462  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]
          Length = 448

 Score = 26.2 bits (56), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 39/94 (41%), Gaps = 22/94 (23%)

Query: 518 LEPVYKKIEPIKIQGSLIGEKVVENVLKQTLDFYEGSGIDPV-------NDKEMSFMTAI 570
           LEP+Y   E   I G  +G K          D   GS IDPV       N  + +  T  
Sbjct: 232 LEPIYSGSEFDGILG--LGWK----------DLSIGS-IDPVVVELKKQNKIDNALFTFY 278

Query: 571 ICSKDNKKYVGTVVFASISDDMYQDILLHNKLNH 604
           +   D  K+VG +    I  D Y+  L + KLNH
Sbjct: 279 LPVHD--KHVGYLTIGGIESDFYEGPLTYEKLNH 310



>EAY07050.1 on XP_843847  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 407

 Score = 25.8 bits (55), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 3/38 (7%)

Query: 234 PQPQSQVPIQIHTQPPKYDQP--KPQKEEEPQPE-KPK 268
           PQ Q + PI     PP+   P  K Q EE+P PE +PK
Sbjct: 302 PQEQREPPIPTRGSPPRQSPPEIKVQPEEDPSPEQRPK 339




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07052.1 hypothetical protein TVAG_311770 [Trichomonas
vaginalis G3]
         (251 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609751  variant erythrocyte surface antigen-1, alpha subun...    30   0.17 
XP_001609034  variant erythrocyte surface antigen-1, alpha subun...    25   7.5  
XP_806961   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   8.1  

>EAY07052.1 on XP_001609751  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1298

 Score = 29.6 bits (65), Expect = 0.17,   Method: Composition-based stats.
 Identities = 15/35 (42%), Positives = 25/35 (71%), Gaps = 1/35 (2%)

Query: 73  VVEQAQNALERARIEITQANNERNEANIKIQALYS 107
           +++QA++ALE    +IT   NE N +N+K++A YS
Sbjct: 765 IIKQAKSALEHLG-KITGVGNEVNLSNVKLEAHYS 798



>EAY07052.1 on XP_001609034  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1313

 Score = 24.6 bits (52), Expect = 7.5,   Method: Composition-based stats.
 Identities = 10/31 (32%), Positives = 19/31 (61%)

Query: 69  QMSYVVEQAQNALERARIEITQANNERNEAN 99
           + S  + +A+ ALERA+  +    N++N+ N
Sbjct: 742 ETSQALSKAKTALERAKEMVKNDGNKKNKLN 772



>EAY07052.1 on XP_806961   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 702

 Score = 24.3 bits (51), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)

Query: 166 EVKIGSITPIKYKLGSNEMKSWILLGETKNGDWTV-LDEQSDYTYSYYNEKGNKFKVA 222
            V  GS+  +  KL  +  + +I L  T  G W V LD  +  + S + E G +++VA
Sbjct: 565 RVPAGSVPLLGVKLDHSNRRGFIGLSCTAEGKWEVSLDGNTTRSSSNW-EPGREYQVA 621




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07060.1 hypothetical protein TVAG_311860 [Trichomonas
vaginalis G3]
         (138 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07061.1 hypothetical protein TVAG_311870 [Trichomonas
vaginalis G3]
         (78 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609666  variant erythrocyte surface antigen-1, alpha subun...    23   2.6  
XP_001351321  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   3.0  

>EAY07061.1 on XP_001609666  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1269

 Score = 23.1 bits (48), Expect = 2.6,   Method: Composition-based stats.
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%)

Query: 41  KIKQPLDK--EGILRKIKLHEDNIAKLKKKLEELEKG 75
           K+K+ L K  EG+       +D + + KKKL+EL  G
Sbjct: 641 KVKEALRKAKEGLETAKNGLKDKLEEAKKKLDELTNG 677



>EAY07061.1 on XP_001351321  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3467

 Score = 22.7 bits (47), Expect = 3.0,   Method: Composition-based stats.
 Identities = 10/12 (83%), Positives = 10/12 (83%)

Query: 16   EYLKSGTIPEGF 27
            E LKSGTIPE F
Sbjct: 1298 EELKSGTIPENF 1309




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07067.1 hypothetical protein TVAG_140410 [Trichomonas
vaginalis G3]
         (941 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07076.1 hypothetical protein TVAG_140500 [Trichomonas
vaginalis G3]
         (95 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_803103   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   7.9  
XP_815148   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   8.1  
XP_807549   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   8.1  
XP_815151   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   8.1  

>EAY07076.1 on XP_803103   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 531

 Score = 22.3 bits (46), Expect = 7.9,   Method: Composition-based stats.
 Identities = 6/17 (35%), Positives = 13/17 (76%)

Query: 7   FGDRHDNNIIVIRDGHL 23
           +G++HD N+ ++R G +
Sbjct: 296 WGNKHDENVKLVRGGFI 312



>EAY07076.1 on XP_815148   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 882

 Score = 22.3 bits (46), Expect = 8.1,   Method: Composition-based stats.
 Identities = 6/17 (35%), Positives = 13/17 (76%)

Query: 7   FGDRHDNNIIVIRDGHL 23
           +G++HD N+ ++R G +
Sbjct: 334 WGNKHDENVKLVRGGFI 350



>EAY07076.1 on XP_807549   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 894

 Score = 22.3 bits (46), Expect = 8.1,   Method: Composition-based stats.
 Identities = 6/17 (35%), Positives = 13/17 (76%)

Query: 7   FGDRHDNNIIVIRDGHL 23
           +G++HD N+ ++R G +
Sbjct: 353 WGNKHDENVKLVRGGFI 369



>EAY07076.1 on XP_815151   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 894

 Score = 22.3 bits (46), Expect = 8.1,   Method: Composition-based stats.
 Identities = 6/17 (35%), Positives = 13/17 (76%)

Query: 7   FGDRHDNNIIVIRDGHL 23
           +G++HD N+ ++R G +
Sbjct: 353 WGNKHDENVKLVRGGFI 369




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07077.1 hypothetical protein TVAG_140510 [Trichomonas
vaginalis G3]
         (107 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351876  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   4.3  

>EAY07077.1 on XP_001351876  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3164

 Score = 23.5 bits (49), Expect = 4.3,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 43   NLMLSPKSNNSSLNPCQRLYHD 64
            N +L  K+ NS ++ C R Y D
Sbjct: 1240 NTLLKDKNENSDIDQCIRKYKD 1261




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07086.1 hypothetical protein TVAG_140600 [Trichomonas
vaginalis G3]
         (364 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07087.1 hypothetical protein TVAG_140610 [Trichomonas
vaginalis G3]
         (378 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07088.1 hypothetical protein TVAG_140620 [Trichomonas
vaginalis G3]
         (384 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_820183   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.22 

>EAY07088.1 on XP_820183   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 721

 Score = 30.0 bits (66), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 58/136 (42%), Gaps = 23/136 (16%)

Query: 176 ELLEYSGIYSFGNISLGIVTAHQLKPSRKS----IKFNGYPTNLRFLTMGDFKAANMKFA 231
           ELL  SG +   ++ L +V     KP+       I + G PT+L   T+   KA    FA
Sbjct: 208 ELLNESGKWKRDSLELKLVVGDVTKPTDSEQSGWITW-GTPTSLSQTTLKTPKAGLKDFA 266

Query: 232 ------VLSD----VFPNLSFSIRGEKELPNPVVSTRLSFLADFTQQEDGEFGVNLAGCA 281
                 VL +    VFP ++ S  G       VV + + +  D  ++     G++  GC 
Sbjct: 267 SSGGSGVLMEGGTLVFPLMAQSGNG-------VVYSMIIYSTDNGEKWSLSEGMSPVGCL 319

Query: 282 NLKSERW-GNLAFKAD 296
           NL+   W G+L    D
Sbjct: 320 NLRVTEWEGSLLMIVD 335




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07089.1 hypothetical protein TVAG_140630 [Trichomonas
vaginalis G3]
         (760 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07096.1 hypothetical protein TVAG_342600 [Trichomonas
vaginalis G3]
         (432 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ABA06473  MSA-2b  (Invasion)  [Babesia bovis]                          29   0.39 
XP_001350082  Rh2b  (Adhesin)  [Plasmodium falciparum]                 30   0.42 
XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 29   0.57 
XP_001609618  variant erythrocyte surface antigen-1, alpha subun...    28   0.99 
ABA06451  MSA-2a2  (Invasion)  [Babesia bovis]                         27   1.9  
AAL15423  MSA-2b  (Invasion)  [Babesia bovis]                          27   1.9  
AAL15422  MSA-2a2  (Invasion)  [Babesia bovis]                         26   3.8  
AAL15421  MSA-2a1  (Invasion)  [Babesia bovis]                         26   3.9  
XP_001610721  variant erythrocyte surface antigen-1, alpha subun...    26   5.0  
XP_001609101  variant erythrocyte surface antigen-1, alpha subun...    26   5.3  
XP_001349036  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   8.6  

>EAY07096.1 on ABA06473  MSA-2b  (Invasion)  [Babesia bovis]
          Length = 316

 Score = 29.3 bits (64), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 18/99 (18%)

Query: 33  EMIHELQRQMKDRPTRSELKDV--------------NDNLQKLIDDKNKETNKQIDTLIE 78
           E++ EL+ Q +D+  +S L+ V              NDN Q+L+ DKN E  K     I 
Sbjct: 98  EVLRELEIQDQDQIFKSLLERVPLIKTMLTEFNAFLNDNPQRLLADKNGEVTKYYKKHIS 157

Query: 79  GLENKLKDLETTLE--NRMLDTAN-MMNLTIQ-QKFDEL 113
             +  +KD +T ++  N  LD+ +  M L     ++DEL
Sbjct: 158 AKDANVKDYKTMVKFCNDFLDSKSPFMRLYKHLNEYDEL 196



>EAY07096.1 on XP_001350082  Rh2b  (Adhesin)  [Plasmodium falciparum]
          Length = 1115

 Score = 29.6 bits (65), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 7/67 (10%)

Query: 82  NKLKDLETTLENRMLDTANMMNLTIQQKFDELENRNNNGDTKMSDFIERLQALEET---- 137
           NKLK++E +LE     + N   +   Q  D L+N  NN  TK++D ++ L  ++ T    
Sbjct: 184 NKLKEIENSLETYNSISTNFNKINETQNIDILKNEFNNIKTKINDKVKELVHVDSTLTLE 243

Query: 138 ---TFNN 141
              TFNN
Sbjct: 244 SIQTFNN 250



>EAY07096.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 29.3 bits (64), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 7/67 (10%)

Query: 82   NKLKDLETTLENRMLDTANMMNLTIQQKFDELENRNNNGDTKMSDFIERLQALEET---- 137
            NKLK++E +LE     + N   +   Q  D L+N  NN  TK++D ++ L  ++ T    
Sbjct: 2323 NKLKEIENSLETYNSISTNFNKINETQNIDILKNEFNNIKTKINDKVKELVHVDSTLTLE 2382

Query: 138  ---TFNN 141
               TFNN
Sbjct: 2383 SIQTFNN 2389



>EAY07096.1 on XP_001609618  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1325

 Score = 28.5 bits (62), Expect = 0.99,   Method: Composition-based stats.
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 5/40 (12%)

Query: 374 EEDATRMLGQPT--NSYAGKGGTTNLGLLYAKKDGMDSAI 411
           E+D T+MLG+PT  +SY    G  N   +Y   DG D  I
Sbjct: 246 EDDKTKMLGRPTFHDSYQSAYGEMNFISIY---DGSDYRI 282



>EAY07096.1 on ABA06451  MSA-2a2  (Invasion)  [Babesia bovis]
          Length = 287

 Score = 26.9 bits (58), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 14/69 (20%)

Query: 32  EEMIHELQRQMKDRPTRSELKDV--------------NDNLQKLIDDKNKETNKQIDTLI 77
           +E++ EL+ Q +D+  +S L+ V              NDN Q+L+ DKN E  K     I
Sbjct: 97  KEVLRELEIQDQDQIFKSLLERVPLIKTMLTEFNAFLNDNPQRLLADKNGEVTKYYKKHI 156

Query: 78  EGLENKLKD 86
              +  +KD
Sbjct: 157 SAKDANVKD 165



>EAY07096.1 on AAL15423  MSA-2b  (Invasion)  [Babesia bovis]
          Length = 287

 Score = 26.9 bits (58), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 14/69 (20%)

Query: 32  EEMIHELQRQMKDRPTRSELKDV--------------NDNLQKLIDDKNKETNKQIDTLI 77
           +E++ EL+ Q +D+  +S L+ V              NDN Q+L+ DKN E  K     I
Sbjct: 97  KEVLRELEIQDQDQIFKSLLERVPLIKTMLTEFNAFLNDNPQRLLADKNGEVTKYYKKHI 156

Query: 78  EGLENKLKD 86
              +  +KD
Sbjct: 157 SAKDANVKD 165



>EAY07096.1 on AAL15422  MSA-2a2  (Invasion)  [Babesia bovis]
          Length = 292

 Score = 26.2 bits (56), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 4/64 (6%)

Query: 54  VNDNLQKLIDDKNKETNKQIDTLIEGLENKLKDLETTLE--NRMLDTAN-MMNLTIQ-QK 109
           +NDN Q+L+ DKN E  K     I   +  +KD    ++  N  LD+ +  M L     +
Sbjct: 133 LNDNPQRLLADKNGEVTKYYKKHISAKDANVKDYTFLVKFCNDFLDSKSPFMRLYKHLNE 192

Query: 110 FDEL 113
           +DEL
Sbjct: 193 YDEL 196




 Score = 25.8 bits (55), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 8/58 (13%)

Query: 87  LETTLENRMLDTANMMNL--------TIQQKFDELENRNNNGDTKMSDFIERLQALEE 136
           L TTL + M   AN +          ++++KF E++  ++N    ++ F+E L + +E
Sbjct: 29  LSTTLHDEMKQVANYVKFLTNDENKESLEEKFKEVDMPSDNSLDAINAFVEILDSFKE 86



>EAY07096.1 on AAL15421  MSA-2a1  (Invasion)  [Babesia bovis]
          Length = 316

 Score = 26.2 bits (56), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 28/125 (22%), Positives = 54/125 (43%), Gaps = 22/125 (17%)

Query: 87  LETTLENRMLDTANMMNL--------TIQQKFDELENRNNNGDTKMSDFIERLQALEE-- 136
           L TTL + M   AN +          ++++KF E++  ++N    ++ F+E L + +E  
Sbjct: 29  LSTTLHDEMKQVANYVKFLTNDENKESLEEKFKEVDMPSDNSLDAINAFVEILDSFKEKV 88

Query: 137 ----TTFNNGKKLHLTREAVQQIASSICY--------LNNTNAILDNTLPDTLKAAVGTV 184
               + F+N    +L  +   +I  S+          L+  NA L++  P  L      +
Sbjct: 89  PFKTSLFDNSVFDNLKYQDTDEIFKSLLLRVPLIKKMLSEFNAFLNDNPPHMLTNGKEKM 148

Query: 185 TTNFK 189
           T  +K
Sbjct: 149 TEYYK 153



>EAY07096.1 on XP_001610721  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1331

 Score = 26.2 bits (56), Expect = 5.0,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 3/52 (5%)

Query: 64  DKNKETNKQIDTLIEGLENKLKDLETTLENRMLDTANMMNLTIQQKFDELEN 115
           D+  E   ++   +E L+N+LKD  + L+  + D A       QQ  D++++
Sbjct: 793 DRISEAISKVRDALEALKNELKDKNSMLKGGLADWATA---KFQQAIDQIKD 841



>EAY07096.1 on XP_001609101  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1359

 Score = 26.2 bits (56), Expect = 5.3,   Method: Composition-based stats.
 Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 12/98 (12%)

Query: 73  IDTLIEGLENKLKDLE---TTLE--NRMLDTANMMNLTIQQKFDELENRNNNGDTKMSDF 127
           ++ L+EG++ K+K LE    TLE     L+ A      ++    ELE       T    F
Sbjct: 726 VEKLVEGVKEKVKALEEIKKTLEAAKEKLEEAKKTQEALEAAKGELEGAKGALTTAKKAF 785

Query: 128 ------IERLQALEETTFNN-GKKLHLTREAVQQIASS 158
                 I+  + +   T +   K L L ++AVQQI  +
Sbjct: 786 PGSSSDIDPCKNIVSATIDGLHKALQLLKDAVQQIMEA 823



>EAY07096.1 on XP_001349036  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2192

 Score = 25.4 bits (54), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 13/51 (25%), Positives = 25/51 (49%)

Query: 308 QAVIGEMAGRVDELKDCIEETATRDEINAMIEDIFNSMTQGGQTAIGRVRC 358
           +  I E+ G + +     EETA+  E   ++++ +N+   GG  +  R  C
Sbjct: 44  KKYIKELKGDLSKATFSSEETASSIETCYLVKEYYNNHVNGGDVSGERNPC 94




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07097.1 histidyl-tRNA synthetase family protein
[Trichomonas vaginalis G3]
         (797 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001350595  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   5.9  
XP_001611441  variant erythrocyte surface antigen-1, beta subuni...    27   7.7  

>EAY07097.1 on XP_001350595  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2256

 Score = 26.9 bits (58), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 13/79 (16%)

Query: 171 AEFKGAALLSSEEFSRELAP----QFVSIVAQRIFDIA---------LNSKNLRKKGSKI 217
           A+F+G  L +     ++  P    Q  +++A+   DI          L +   +KK  ++
Sbjct: 150 AKFEGETLTTQHGQHQQTNPGTASQLCTVLARSFADIGDIVRGKDLFLGNDEEKKKRDEL 209

Query: 218 LSSLPKLFAPIFAAVAQLR 236
             +L K+FA I + +   R
Sbjct: 210 EENLQKIFAKIHSGLTSTR 228



>EAY07097.1 on XP_001611441  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 1205

 Score = 26.6 bits (57), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 10/87 (11%)

Query: 576 VLAALRQKQDFVA--VAGKVLDEMEVLFNYLEATGCLGNINFDLSLARGLDYYTGVIYEA 633
           V    RQ  +F A  V  K+ DE+E +         LG +    +L   LD ++G   E+
Sbjct: 853 VYIGARQSWNFTAKSVWSKLRDEVENVG--------LGMVKKGETLVTALDKFSGTTAES 904

Query: 634 GTTSGDVGSIAGGGRYDGLIGMFSGRQ 660
             T+G +  ++G       +   SG+Q
Sbjct: 905 NGTNGTLSCLSGCSTGSPYLSPLSGQQ 931




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07098.1 hypothetical protein TVAG_342620 [Trichomonas
vaginalis G3]
         (132 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_814927   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   1.1  
XP_817493   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   1.2  
XP_803984   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   1.7  
XP_815971   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   5.6  
XP_807798   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   7.2  
XP_810023   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   7.8  
XP_001347288  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   9.4  

>EAY07098.1 on XP_814927   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 759

 Score = 25.4 bits (54), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 25/40 (62%), Gaps = 1/40 (2%)

Query: 10  LLSSDKNNFKLSVSAVNPNGCTREGTYTLCVGSHKNFKKN 49
           L S++   +++ V+ + P G TR+    L VGS++ +++N
Sbjct: 170 LESANNRKYRVGVARL-PTGITRDNKVFLLVGSYEEWREN 208



>EAY07098.1 on XP_817493   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 765

 Score = 25.4 bits (54), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 25/43 (58%), Gaps = 1/43 (2%)

Query: 10  LLSSDKNNFKLSVSAVNPNGCTREGTYTLCVGSHKNFKKNAQE 52
           +L S  + +++ V+ + P G TR     L VGS++ +++N  +
Sbjct: 169 VLESTNSKYRVGVAKL-PTGITRGNKVFLLVGSYEEWRENVDD 210



>EAY07098.1 on XP_803984   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 794

 Score = 25.0 bits (53), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 6/88 (6%)

Query: 10  LLSSDKNNFKLSVSAVNPNGCTREGTYTLCVGSHKNFKKNAQEFKVGQRLKETQYNFNYT 69
           L S++ + +++ V+ + P G TR     L VGS++ +++N  +       K   +N    
Sbjct: 168 LESANNSKYRVGVARL-PTGITRGNKVFLLVGSYEEWRQNDDDI-----WKTEAWNIKVI 221

Query: 70  NAKRSSIVIALYNRKNFWSEDQELGKTE 97
             + +       ++   WSE + L +T+
Sbjct: 222 EGEATQSTEVQPSQPINWSEPKPLFQTD 249



>EAY07098.1 on XP_815971   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 550

 Score = 23.5 bits (49), Expect = 5.6,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%)

Query: 10  LLSSDKNNFKLSVSAVNPNGCTREGTYTLCVGSHKNFKKN 49
           L S++ + +++ V+ + P G TR     L VGS++  ++N
Sbjct: 168 LESANNSKYRVGVAKL-PTGITRGNKVFLLVGSYEERRQN 206



>EAY07098.1 on XP_807798   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 875

 Score = 23.1 bits (48), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 10/24 (41%), Positives = 13/24 (54%)

Query: 77  VIALYNRKNFWSEDQELGKTEITL 100
           +IALY +K    ED  LG   + L
Sbjct: 445 LIALYEKKKSGDEDASLGMASVLL 468



>EAY07098.1 on XP_810023   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 804

 Score = 23.1 bits (48), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 10/24 (41%), Positives = 13/24 (54%)

Query: 77  VIALYNRKNFWSEDQELGKTEITL 100
           +IALY +K    ED  LG   + L
Sbjct: 398 LIALYEKKKSGDEDASLGMASVLL 421



>EAY07098.1 on XP_001347288  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2241

 Score = 22.7 bits (47), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 19/82 (23%), Positives = 40/82 (48%), Gaps = 12/82 (14%)

Query: 49  NAQEFKVGQRLKETQYNFNYTNAKRSSIVIALYNRKNFWSEDQELGKTEITLDNFDANSP 108
           N ++ K+ +RL++   N  ++NA + S++ +   R+ +W+ +++     +T         
Sbjct: 206 NQRKKKLEERLEQMFKNITHSNAAKLSVLSSKEIREYWWALNRDQVWKALT--------- 256

Query: 109 CTREVQLGTNGPRVILHAQRTE 130
           C  E +LG N      HA  +E
Sbjct: 257 CDEENKLGGN---AYFHATCSE 275




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07102.1 hypothetical protein TVAG_342660 [Trichomonas
vaginalis G3]
         (89 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_965997  PfEMP1  (Establishment)  [Plasmodium falciparum]            25   0.51 
AAC37226  SBP1  (Others)  [Babesia bovis]                              23   2.5  
Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    23   3.6  
XP_001608669  variant erythrocyte surface antigen-1, beta subuni...    23   4.0  
XP_954179  TashAT2  (Establishment)  [Theileria annulata]              23   4.2  
XP_001608667  variant erythrocyte surface antigen-1, beta subuni...    22   5.9  
XP_807074   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   6.1  
XP_001349031  PfEMP1  (Establishment)  [Plasmodium falciparum]         22   7.2  

>EAY07102.1 on XP_965997  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2879

 Score = 25.4 bits (54), Expect = 0.51,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 41   TSHKEIQVKKAPVAHGHAGQGKPAAAPAGDGA-KAPAAAPADKK 83
            T +KE   ++ P  H  A   +P     G GA ++PA + AD +
Sbjct: 1176 TENKEYAFREKPYDHDDACACRPPKPTGGPGAGESPARSDADSR 1219



>EAY07102.1 on AAC37226  SBP1  (Others)  [Babesia bovis]
          Length = 596

 Score = 23.5 bits (49), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 3/29 (10%)

Query: 62  KPAAAPAGDGAKAPAAAPADK---KPADK 87
           KPA  PA   A+ PA  PA+K   KPA+K
Sbjct: 323 KPAEKPAEKPAETPAETPAEKPAEKPAEK 351




 Score = 22.3 bits (46), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)

Query: 63  PAAAPAGDGAKAPAAAPADKKPADK 87
           PA  PA   A+ PA  PA+ KPA+K
Sbjct: 404 PAETPAETPAETPAETPAE-KPAEK 427



>EAY07102.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 23.1 bits (48), Expect = 3.6,   Method: Composition-based stats.
 Identities = 12/28 (42%), Positives = 15/28 (53%)

Query: 11  ASRKILALHQKEVDEKTNHHEKIHGVDP 38
           A ++IL  H K+   K  HHE  H V P
Sbjct: 284 AYQEILGNHSKKPWTKFVHHENQHLVSP 311



>EAY07102.1 on XP_001608669  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 607

 Score = 22.7 bits (47), Expect = 4.0,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 23/64 (35%), Gaps = 3/64 (4%)

Query: 21  KEVDEKTNHHEKIHGVDPLHTSHKEIQVKKAPVAHGHAGQGKPAAAPAGDGAKAPAAAPA 80
           KE  +K N  E I    PL   H    +       G AG       PA     A +A P 
Sbjct: 346 KEALKKDNKTESICEQYPLLVLHI---LASGYFRAGSAGAKGITTLPAKPATSATSATPV 402

Query: 81  DKKP 84
            +KP
Sbjct: 403 SRKP 406



>EAY07102.1 on XP_954179  TashAT2  (Establishment)  [Theileria annulata]
          Length = 1161

 Score = 22.7 bits (47), Expect = 4.2,   Method: Composition-based stats.
 Identities = 9/23 (39%), Positives = 16/23 (69%)

Query: 28  NHHEKIHGVDPLHTSHKEIQVKK 50
           +H  +I  +DPL +S +EI+ +K
Sbjct: 234 DHESEISDIDPLISSDEEIETEK 256



>EAY07102.1 on XP_001608667  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 1139

 Score = 22.3 bits (46), Expect = 5.9,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 23/64 (35%), Gaps = 3/64 (4%)

Query: 21  KEVDEKTNHHEKIHGVDPLHTSHKEIQVKKAPVAHGHAGQGKPAAAPAGDGAKAPAAAPA 80
           KE  +K N  E I    PL   H    +       G AG       PA     A +A P 
Sbjct: 341 KEALKKDNKTESICEQYPLLVLHI---LASGYFRAGSAGAKGITTLPAKPATSATSATPV 397

Query: 81  DKKP 84
            +KP
Sbjct: 398 SRKP 401



>EAY07102.1 on XP_807074   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 822

 Score = 22.3 bits (46), Expect = 6.1,   Method: Composition-based stats.
 Identities = 7/24 (29%), Positives = 13/24 (54%)

Query: 58  AGQGKPAAAPAGDGAKAPAAAPAD 81
           +G    ++ P G GA + ++ P D
Sbjct: 721 SGANSTSSTPVGSGANSTSSTPVD 744



>EAY07102.1 on XP_001349031  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2275

 Score = 22.3 bits (46), Expect = 7.2,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 10/24 (41%)

Query: 61   GKPAAAPAGDGAKAPAAAPADKKP 84
            G PAA P  D  K     P   KP
Sbjct: 1759 GDPAAQPEDDTEKKAPVKPTPTKP 1782




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07111.1 hypothetical protein TVAG_342750 [Trichomonas
vaginalis G3]
         (41 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAZ38166  RON4  (Invasion)  [Toxoplasma gondii]                        20   4.7  

>EAY07111.1 on AAZ38166  RON4  (Invasion)  [Toxoplasma gondii]
          Length = 255

 Score = 20.4 bits (41), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 8/19 (42%), Positives = 11/19 (57%)

Query: 20  GDGAKAPAAAAPADKKSAD 38
           G+G + P  AAP   +S D
Sbjct: 124 GEGERQPPTAAPRTSRSVD 142




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07115.1 hypothetical protein TVAG_342790 [Trichomonas
vaginalis G3]
         (153 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_808432   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   1.5  
XP_817494   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   1.7  
XP_808513   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   3.0  
XP_810809   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   6.4  

>EAY07115.1 on XP_808432   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 831

 Score = 25.8 bits (55), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 21  SMSTPYNITNHTKPTQRETNILNFAETNDSVLDS-FSPEDQALL 63
           S S+  N+T+   P     N  +  ETN S  D   SPED+  L
Sbjct: 750 SESSAENVTDELSPRTAAKNDTSVPETNHSASDGRMSPEDRLAL 793



>EAY07115.1 on XP_817494   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 368

 Score = 25.4 bits (54), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 21  SMSTPYNITNHTKPTQRETNILNFAETNDSVLD-SFSPEDQALL 63
           S S+  N+T+   P    TN  +  ETN S  D S SPED+  L
Sbjct: 287 SESSAENVTDELHPRTAATNDTSVPETNHSASDGSMSPEDRLAL 330



>EAY07115.1 on XP_808513   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 100

 Score = 23.9 bits (50), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 21 SMSTPYNITNHTKPTQRETNILNFAETNDSVLD-SFSPEDQALL 63
          S S+  N+T+   P     N  +  ETN S  D S SPED+  L
Sbjct: 19 SESSAENVTDELSPHTAAKNDTSVPETNHSASDGSMSPEDRLAL 62



>EAY07115.1 on XP_810809   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 99

 Score = 22.7 bits (47), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 21 SMSTPYNITNHTKPTQRETNILNFAETNDSVLD-SFSPEDQALL 63
          S S+  N+T+  +P    TN  +  ETN S  + S SPE++  L
Sbjct: 18 SESSAENVTDGLRPRTAATNDTSVPETNHSASEGSMSPENRLAL 61




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07116.1 hypothetical protein TVAG_342800 [Trichomonas
vaginalis G3]
         (275 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609755  variant erythrocyte surface antigen-1, beta subuni...    31   0.066
XP_001609162  variant erythrocyte surface antigen-1, beta subuni...    29   0.27 
XP_001611146  variant erythrocyte surface antigen-1, beta subuni...    29   0.33 
XP_001609619  variant erythrocyte surface antigen-1, beta subuni...    29   0.33 
XP_001347690  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   1.8  
XP_001611205  variant erythrocyte surface antigen-1, beta subuni...    27   1.9  
XP_001609936  variant erythrocyte surface antigen-1, beta subuni...    26   2.5  
XP_001608667  variant erythrocyte surface antigen-1, beta subuni...    26   3.9  
XP_001609314  variant erythrocyte surface antigen-1, beta subuni...    25   4.7  

>EAY07116.1 on XP_001609755  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 920

 Score = 31.2 bits (69), Expect = 0.066,   Method: Composition-based stats.
 Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 172 YCDLRKCQDGELLQITRELAEDFTLFRPLKLGNFF 206
           YCD  KCQ G L+ + R LA   TL  P  LG+ F
Sbjct: 832 YCDPDKCQSGTLVVLLRLLA-CITLTVPRTLGDLF 865



>EAY07116.1 on XP_001609162  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 1166

 Score = 29.3 bits (64), Expect = 0.27,   Method: Composition-based stats.
 Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 172 YCDLRKCQDGELLQITRELAEDFTLFRPLKLGNFF 206
           YCD  KCQ G L+ + R LA   T   P  LG+ F
Sbjct: 793 YCDPEKCQSGSLVVLLRLLA-CITPTVPRTLGDLF 826



>EAY07116.1 on XP_001611146  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 958

 Score = 28.9 bits (63), Expect = 0.33,   Method: Composition-based stats.
 Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 172 YCDLRKCQDGELLQITRELAEDFTLFRPLKLGNFF 206
           YCD  KCQ G L+ + R LA   T   P  LG+ F
Sbjct: 800 YCDPEKCQSGTLVVLLRLLA-CITPTVPRTLGDLF 833



>EAY07116.1 on XP_001609619  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 1086

 Score = 28.9 bits (63), Expect = 0.33,   Method: Composition-based stats.
 Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 172 YCDLRKCQDGELLQITRELAEDFTLFRPLKLGNFF 206
           YCD  KCQ G L+ + R LA   T   P  LG+ F
Sbjct: 748 YCDPEKCQSGTLVVLLRLLA-CITPTVPRTLGDLF 781



>EAY07116.1 on XP_001347690  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2215

 Score = 26.6 bits (57), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 12/72 (16%)

Query: 163  KYLHTQSQNYCDLRKCQDGELLQITRELAEDFTLFRPLKLGNFFTTEKEWEKCLEFASYA 222
            +YLH   QN+C  RK   G L  I +E          +K  N  +T K+ +KC  +  + 
Sbjct: 1234 RYLHEWGQNFCKKRK---GMLENIKKEC---------MKDSNSGSTGKKVQKCSCYGEHC 1281

Query: 223  EKLINEGKNRVP 234
            +  + +  +  P
Sbjct: 1282 DDQLKDDPSIFP 1293



>EAY07116.1 on XP_001611205  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 1146

 Score = 26.6 bits (57), Expect = 1.9,   Method: Composition-based stats.
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 172 YCDLRKCQDGELLQITRELAEDFTLFRPLKLGNFF 206
           YCD  +CQ G L+ + R +A   T   P  LG+ F
Sbjct: 769 YCDPDRCQSGTLVVLLRLMA-CITPTVPRTLGDLF 802



>EAY07116.1 on XP_001609936  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 1133

 Score = 26.2 bits (56), Expect = 2.5,   Method: Composition-based stats.
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 172 YCDLRKCQDGELLQITRELAEDFTLFRPLKLGNFF 206
           YCD  KC  G L+ + R LA   T   P  LG+ F
Sbjct: 788 YCDPEKCPSGTLVVLLRLLA-CITPTVPRTLGDLF 821



>EAY07116.1 on XP_001608667  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 1139

 Score = 25.8 bits (55), Expect = 3.9,   Method: Composition-based stats.
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 172 YCDLRKCQDGELLQITRELAEDFTLFRPLKLGNFF 206
           YCD  KC  G L+ + R LA   T   P  LG+ F
Sbjct: 768 YCDPDKCPSGTLVVLLRLLA-CITPTVPRTLGDLF 801



>EAY07116.1 on XP_001609314  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 1115

 Score = 25.4 bits (54), Expect = 4.7,   Method: Composition-based stats.
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 172 YCDLRKCQDGELLQITRELAEDFTLFRPLKLGNFF 206
           YCD  KC  G L+ + R LA   T   P  LG+ F
Sbjct: 774 YCDPGKCPSGTLVVLLRLLA-CITPTVPRTLGDLF 807




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07117.1 hypothetical protein TVAG_342810 [Trichomonas
vaginalis G3]
         (274 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001347690  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   2.7  

>EAY07117.1 on XP_001347690  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2215

 Score = 26.2 bits (56), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 12/72 (16%)

Query: 163  KYLHTQSQNYCDLRKDEDSELYQLTQSLVSNISHFQPLKLGDFFSTEKEWEKCLEFASYA 222
            +YLH   QN+C  RK            ++ NI   + +K  +  ST K+ +KC  +  + 
Sbjct: 1234 RYLHEWGQNFCKKRK-----------GMLENIKK-ECMKDSNSGSTGKKVQKCSCYGEHC 1281

Query: 223  EKLIKEGKTNIP 234
            +  +K+  +  P
Sbjct: 1282 DDQLKDDPSIFP 1293




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07119.1 ribosomal protein S14, putative [Trichomonas
vaginalis G3]
         (160 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_809960   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   8.2  

>EAY07119.1 on XP_809960   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 890

 Score = 23.5 bits (49), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 6/57 (10%)

Query: 24  VQLGPVKRDGE-IVMGVAHIYAS---KNDTFV--HVTDLSGSETLARCTGGIAVRAQ 74
           V +GPV R+GE  V   + +Y S   +N   +  +  D SG +T +R    + + AQ
Sbjct: 404 VDIGPVSREGEDDVTASSLLYKSGGGENKELIALYEKDRSGEDTSSRSLWSVLLTAQ 460




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07124.1 hypothetical protein TVAG_342880 [Trichomonas
vaginalis G3]
         (420 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07125.1 MGC16169 protein, putative [Trichomonas
vaginalis G3]
         (338 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351321  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   8.3  
XP_808176   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   9.8  

>EAY07125.1 on XP_001351321  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3467

 Score = 25.0 bits (53), Expect = 8.3,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 8/58 (13%)

Query: 193 SQLLIRNGLIVIYSSLENTRQIYQYFNVINKAIAMNDKELSSYFNEIGILNPMHYCFS 250
           S  L+ + L+      +N +++YQ  N  N  I  NDKE         I   M Y F+
Sbjct: 873 SHSLLGDVLLAAKYEAKNIKELYQQNNSKNGVIDQNDKET--------ICRAMKYSFA 922



>EAY07125.1 on XP_808176   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 889

 Score = 24.6 bits (52), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 30/165 (18%)

Query: 72  NNYVEILNQHLEYDENFLHKPIEEEMDS--EMSKLLQEVDNDMKRTVNSFRSSLI----- 124
           N +  I +Q L  D+    +P EE + +  E ++ L+EV +  K+ V+  R + +     
Sbjct: 116 NGFTGIASQLLSMDKG--KEPKEEVLKNAKEKTQFLEEVTSTEKKRVDVSRPTTVVKEND 173

Query: 125 --------SHLETSDLEIHTRRMER--ILILFAITEPDLNYIQGLNELILPIYTVSYYAG 174
                   SH      +  T  ++   +L+   + E D N I       LP      +  
Sbjct: 174 IYMLVGKHSHDAAGSCKAGTENIKSGILLVKGKVGEGDNNQIHWRETDGLPCTLGDQHES 233

Query: 175 -----------MKLNYDVITIEAVSMKLLSQLLIRNGLIVIYSSL 208
                      +KLN   +     + K      ++  L++IYSS+
Sbjct: 234 WTGLIGGGGSGVKLNEGTLAFPVEATKKREDKDVKTALLIIYSSV 278




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07126.1 Isoflavone reductase, putative [Trichomonas
vaginalis G3]
         (191 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAZ73239  ROP16  (Establishment)  [Toxoplasma gondii]                  27   0.66 
XP_965997  PfEMP1  (Establishment)  [Plasmodium falciparum]            24   5.8  

>EAY07126.1 on AAZ73239  ROP16  (Establishment)  [Toxoplasma gondii]
          Length = 255

 Score = 26.9 bits (58), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 138 WFTSANEIDYILTPKGQPERGTSISRKSIADFVVKIFENPSEYIGENLNIA 188
           WF +    + I TP   P +  +  + S++  VV  F+ P E  G   ++A
Sbjct: 148 WFPT----ESIFTPWSSPPQPLTQRKPSLSGVVVTEFQEPQEQYGAASSLA 194



>EAY07126.1 on XP_965997  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2879

 Score = 24.3 bits (51), Expect = 5.8,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 22/49 (44%)

Query: 131  YTILRPNWFTSANEIDYILTPKGQPERGTSISRKSIADFVVKIFENPSE 179
            +T+   +  T+   I Y     G   +GT I   S++D +  IF N  +
Sbjct: 2176 WTVYNKDSTTAFEAIKYSFADYGDIIKGTDIMESSLSDKIGNIFTNTKD 2224




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07128.1 hypothetical protein TVAG_342920 [Trichomonas
vaginalis G3]
         (437 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_821133   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   1.7  
XP_001349740  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   7.1  
XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 25   9.2  
XP_810286   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   9.2  

>EAY07128.1 on XP_821133   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 896

 Score = 27.7 bits (60), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 393 KEEKTEKKKEETPP-PTNNATPEKETPRVEFDIKDNEDDS 431
           K   TE    +TPP  +  ATPE  TP +    K NE DS
Sbjct: 736 KARGTETVNGDTPPVASKQATPEAGTPSILGGQKQNEQDS 775



>EAY07128.1 on XP_001349740  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3346

 Score = 25.8 bits (55), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 10/19 (52%), Positives = 12/19 (63%)

Query: 261  SPPPQPPQNQLPPLPIKSF 279
            SPPP P      PLP++SF
Sbjct: 2237 SPPPNPDTQTDTPLPLESF 2255



>EAY07128.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 25.4 bits (54), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 19/103 (18%)

Query: 294  AEEKKDKSDDKKKKSSSSSSDSSSSSSSSDSNV----F-EDKPIPVAPDSPKSKDMPSLL 348
            ++EKKD+++  K+   S +  ++SS S++D N     F   K + VA  +  S  +  L+
Sbjct: 3023 SKEKKDETESTKR---SGTDHTNSSESTTDDNTNDRNFSRSKNLSVAIYTAGSVALCVLI 3079

Query: 349  DQSVRQGMIWTKGNKPDVMT---------KDDTKVEEKEEIIE 382
              S+  G++  K N  D  +          DD   +EK+EIIE
Sbjct: 3080 FSSI--GLLLIKTNSGDNNSNEINEAFEPNDDVLFKEKDEIIE 3120



>EAY07128.1 on XP_810286   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 846

 Score = 25.0 bits (53), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 20/51 (39%), Gaps = 7/51 (13%)

Query: 393 KEEKTEKKKEETPPPTNNATPEKETP-------RVEFDIKDNEDDSESSEF 436
           K E TE  K   P     ATPE ETP       R E D     DD+ S   
Sbjct: 632 KAEGTETVKGTPPEAIKQATPEAETPSSLVGQQRTEQDSLKKSDDAGSGGL 682




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07131.1 hypothetical protein TVAG_342950 [Trichomonas
vaginalis G3]
         (319 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_812793   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   3.0  

>EAY07131.1 on XP_812793   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 920

 Score = 26.2 bits (56), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)

Query: 250 SKFNPKERSVPVKTQKKWDADGFPIDTRVPFREKQIPISSLV-VIPQPKPTSEPIST 305
             FNP + ++PV+  K  + D           + Q+ +SS   V+  P  +S P S+
Sbjct: 712 GAFNPNKANIPVQVDKSVEGDAVQSSGGGKEEQGQLLVSSGADVVSAPTVSSAPTSS 768




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07134.1 hypothetical protein TVAG_342980 [Trichomonas
vaginalis G3]
         (301 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CAB37326  PfSUB2  (Proteases)  [Plasmodium falciparum]                 25   5.6  

>EAY07134.1 on CAB37326  PfSUB2  (Proteases)  [Plasmodium falciparum]
          Length = 1342

 Score = 25.4 bits (54), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 11/35 (31%), Positives = 17/35 (48%)

Query: 191 YRVIYTPKKPKFTHLFGFQYAEENYAATLEYETKV 225
           Y+++   K PKF  + G    EE   + +E   KV
Sbjct: 362 YKIVLMTKNPKFMDMDGIYDEEEKKESLIELNQKV 396




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07143.1 hypothetical protein TVAG_343070 [Trichomonas
vaginalis G3]
         (183 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351079  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   0.63 
XP_001350409  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   2.1  
XP_001609539  variant erythrocyte surface antigen-1, beta subuni...    25   2.4  
XP_001347691  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   2.8  
XP_001351563  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   7.6  
XP_001349036  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   8.2  
XP_001350410  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   9.2  
XP_001351877  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   10.0 

>EAY07143.1 on XP_001351079  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2203

 Score = 27.3 bits (59), Expect = 0.63,   Method: Composition-based stats.
 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 119  DRTNDFTKCII-YSPAFNIPSVCEYFLSNSEHINDEEFHFLSYRKINYDIMTKL 171
            D T+D  K  I +  A  + S+   FL    H   + F  +   K +YDI TKL
Sbjct: 1742 DNTSDILKTTIPFGIALALTSIAFLFLKKKTHAPLDLFSVIDIPKSDYDIPTKL 1795



>EAY07143.1 on XP_001350409  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2223

 Score = 25.8 bits (55), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 10/30 (33%), Positives = 16/30 (53%)

Query: 95   VHNIKIDVRDCEYFNNLQVFFVYLDRTNDF 124
            +H++    RD    N L++F  +LDR  D 
Sbjct: 2045 IHSVAKPARDDPLHNQLELFHKWLDRHRDM 2074



>EAY07143.1 on XP_001609539  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 884

 Score = 25.4 bits (54), Expect = 2.4,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 49  HCLGLSFIGGNPDIISECLKKQKPN 73
           +CLGLS   GN + + + L  ++PN
Sbjct: 295 YCLGLSGNTGNGEFVQKLLSGKQPN 319



>EAY07143.1 on XP_001347691  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2182

 Score = 25.4 bits (54), Expect = 2.8,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 11/71 (15%)

Query: 54   SFIGGNP-DIISECLKKQKPNYRCMKYAIMSHNIDFVTYLIDVHNIKIDVRDCEYFNNLQ 112
            S  GG P DI  E LK+++       +   +           +H++   + D    N L+
Sbjct: 1986 SLSGGEPIDIYDEVLKRKENELFGTNHVKQT----------SIHSVAKPISDDPIHNQLE 2035

Query: 113  VFFVYLDRTND 123
            +F  +LDR  D
Sbjct: 2036 LFHTWLDRHRD 2046



>EAY07143.1 on XP_001351563  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2149

 Score = 23.9 bits (50), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 9/30 (30%), Positives = 16/30 (53%)

Query: 95   VHNIKIDVRDCEYFNNLQVFFVYLDRTNDF 124
            +H++   + D    N L++F  +LDR  D 
Sbjct: 1971 IHSVAKPISDDPLLNQLELFHKWLDRHRDM 2000



>EAY07143.1 on XP_001349036  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2192

 Score = 23.9 bits (50), Expect = 8.2,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 119  DRTNDFTKCII-YSPAFNIPSVCEYFLSNSEHINDEEFHFLSYRKINYDIMTKL 171
            D T+D  K  I +  A  + S+   FL        + F  ++  K +YDI TKL
Sbjct: 1755 DNTSDILKTTIPFGIALALTSIALLFLKKKTKHPVDLFSVINIPKSDYDIPTKL 1808



>EAY07143.1 on XP_001350410  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2178

 Score = 23.5 bits (49), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 10/31 (32%), Positives = 15/31 (48%)

Query: 90   TYLIDVHNIKIDVRDCEYFNNLQVFFVYLDR 120
            T   + +N+    RD    N L +F  +LDR
Sbjct: 1956 TKHTNTYNVAKPARDDPLHNQLNLFHTWLDR 1986



>EAY07143.1 on XP_001351877  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2270

 Score = 23.5 bits (49), Expect = 10.0,   Method: Composition-based stats.
 Identities = 9/32 (28%), Positives = 16/32 (50%)

Query: 95   VHNIKIDVRDCEYFNNLQVFFVYLDRTNDFTK 126
            +H++   + D    N L +F  +LDR  D  +
Sbjct: 2076 IHSVAKPISDDPIHNQLNLFHTWLDRQRDMCQ 2107




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07144.1 hypothetical protein TVAG_343080 [Trichomonas
vaginalis G3]
         (194 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_829768  VSG  (Establishment)  [Trypanosoma brucei]                  25   3.5  
XP_821902   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   5.5  

>EAY07144.1 on XP_829768  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 485

 Score = 25.0 bits (53), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%)

Query: 88  HSKKIAAVLISRGADVNAKDRYGYTPL-HVAVESTIVSSF 126
           H+++ AAV+I+R  ++  + R  Y PL    VE  ++++ 
Sbjct: 125 HARQAAAVVINRTLEMALERRKDYKPLKKTGVEEALLTAL 164



>EAY07144.1 on XP_821902   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 854

 Score = 24.3 bits (51), Expect = 5.5,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 23/44 (52%)

Query: 14  DLGSIDDDNNKKIVEFLIANGAYVNDQDSEGKTPLQIALQKHSI 57
           D+G + ++++     FL+   A   D D+EG+  + +  +K  +
Sbjct: 423 DIGPVSEEDDDVTTSFLLYKSAGSGDGDNEGEKLIALYEKKKKV 466




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07145.1 ankyrin repeat protein, putative [Trichomonas
vaginalis G3]
         (157 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_656181  Hgl2  (Adhesin)  [Entamoeba histolytica]                    27   0.74 
XP_802262   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   0.75 
XP_655415  Hgl  (Adhesin)  [Entamoeba histolytica]                     27   0.81 
XP_815197   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   4.2  
XP_815193   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   4.3  

>EAY07145.1 on XP_656181  Hgl2  (Adhesin)  [Entamoeba histolytica]
          Length = 1286

 Score = 26.6 bits (57), Expect = 0.74,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 3/40 (7%)

Query: 113 YVVEEYDPSIDYVKILISSGANVNAMDINGNTPLQYAIKK 152
           Y +E+Y+   D V +       + ++DING T  +YA K+
Sbjct: 112 YPIEKYEVDWDNVPV---DEQQIESVDINGKTCFKYAAKR 148



>EAY07145.1 on XP_802262   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 443

 Score = 26.6 bits (57), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 24/106 (22%), Positives = 48/106 (45%), Gaps = 7/106 (6%)

Query: 53  VIIAEVLISHGANINAKDIFGYTPLHIAVQ---SKYFSSMVKFLTEQGADVNAIDNDMKT 109
           +++  V  S G   + +  +G   L ++V    + Y S   +F    G+ V  ++N    
Sbjct: 59  LVVGTVTNSTGGEPSKRIEWGAPKLLLSVNISATSYESKFERFFPSGGSGV-LMNNGT-- 115

Query: 110 PLHYVVEEYDPSIDYVKILISSGANVNAMDINGNTPLQYAIKKIIK 155
            L + V  +D + DY  I+ S+    N M  NG +P + +  ++ +
Sbjct: 116 -LVFPVVAFDDNDDYSMIIYSTDDGANWMLSNGTSPAKCSNSRVTE 160



>EAY07145.1 on XP_655415  Hgl  (Adhesin)  [Entamoeba histolytica]
          Length = 1291

 Score = 26.6 bits (57), Expect = 0.81,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 3/40 (7%)

Query: 113 YVVEEYDPSIDYVKILISSGANVNAMDINGNTPLQYAIKK 152
           Y +E+Y+   D V +       + ++DING T  +YA K+
Sbjct: 109 YPIEKYEVDWDNVPV---DEQRIESVDINGKTCFKYAAKR 145



>EAY07145.1 on XP_815197   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 679

 Score = 24.3 bits (51), Expect = 4.2,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 24/45 (53%)

Query: 111 LHYVVEEYDPSIDYVKILISSGANVNAMDINGNTPLQYAIKKIIK 155
           L + V  +D + DY  I+ S+ +  N M  NG +P + +  +I +
Sbjct: 285 LVFPVFAFDDNDDYSMIIYSTDSGANWMLSNGTSPAKCSNPRITE 329



>EAY07145.1 on XP_815193   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 702

 Score = 24.3 bits (51), Expect = 4.3,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 24/45 (53%)

Query: 111 LHYVVEEYDPSIDYVKILISSGANVNAMDINGNTPLQYAIKKIIK 155
           L + V  +D + DY  I+ S+ +  N M  NG +P + +  +I +
Sbjct: 232 LVFPVFAFDDNDDYSMIIYSTDSGANWMLSNGTSPAKCSNPRITE 276




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07156.1 small GTP-binding protein, putative
[Trichomonas vaginalis G3]
         (179 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BAB40673  Rab5  (Establishment)  [Entamoeba histolytica]               83   3e-21
XP_649196  Rab7A  (Establishment)  [Entamoeba histolytica]             76   2e-18
AAB86482  RabA  (Invasion)  [Entamoeba histolytica]                    75   7e-18
BAD34969  Rab7B  (Establishment)  [Entamoeba histolytica]              73   3e-17
XP_652776  Rab11B  (Establishment)  [Entamoeba histolytica]            70   2e-16
PFE0340c  ROM4  (Invasion)  [Plasmodium falciparum]                    24   7.0  
XP_818708   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   9.5  

>EAY07156.1 on BAB40673  Rab5  (Establishment)  [Entamoeba histolytica]
          Length = 195

 Score = 82.8 bits (203), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 93/167 (55%), Gaps = 11/167 (6%)

Query: 1   MSKAN--EIKLVVIGDGAVGKTSL-LSVLKGE--PFPERYVPTVFDNYALDVTHNNKPYR 55
           MS+ N  + K+V++GD +VGK+S+ L V K E   F E  +   F    L V  + +  +
Sbjct: 1   MSEGNTYQFKIVLLGDSSVGKSSIVLRVCKDEYKEFQENTIGAAFLTKTLIV--DGETIK 58

Query: 56  LHIWDTAGQDEFDRLRPLSYQDAKVILICFELDKRASFSNLSDRWIAEVNYFCKEVKMIL 115
             IWDTAGQ+ +  L P+ Y+ +   L+ +++   +SF   + +WI E+     E  + L
Sbjct: 59  FEIWDTAGQERYHSLTPMYYRGSNAALVVYDITSDSSFIQ-AKKWIDELRGSGNEAIIFL 117

Query: 116 VGCKADLREQSNESVSDEEALAFAKQHGGIPYIATSARTGLNVDKVF 162
           VG K DL   ++  ++ EEA  +A+    I YI TSA+  +NV+++F
Sbjct: 118 VGNKCDL--DNSRVITKEEAEGYARSL-SIDYIETSAKANINVNELF 161



>EAY07156.1 on XP_649196  Rab7A  (Establishment)  [Entamoeba histolytica]
          Length = 206

 Score = 75.9 bits (185), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 92/177 (51%), Gaps = 9/177 (5%)

Query: 7   IKLVVIGDGAVGKTSLLSVLKGEPFPERYVPTVFDNY-ALDVTHNNKPYRLHIWDTAGQD 65
           +K++++GD  VGKTSL++      +   Y  T+  ++   D+  +N    + IWDTAG +
Sbjct: 8   LKVIILGDSGVGKTSLMNQFVNHKYSSVYKATIGADFLTKDLVVDNHEVTMQIWDTAGNE 67

Query: 66  EFDRLRPLSYQDAKVILICFELDKRASFSNLSDRWIAE--VNYFCK---EVKMILVGCKA 120
            F  L    Y+ A    +C++++   +F +L++ W  E  V    K   +   +++G K 
Sbjct: 68  RFQSLGVAFYRGADCCALCYDVNDPKTFESLNN-WREEFLVQASPKNQDQFPFVVLGNKV 126

Query: 121 DLREQSNESVSDEEALAFAKQHGGIPYIATSARTGLNVDKVFPTAIDITSIKKKGCE 177
           D  E S +++  ++A  +  +H  IP+  TSA+   NVD  F  +I   +I +KG +
Sbjct: 127 DTYEGSPDAIK-KKAEQWCSEHFNIPFFETSAKNATNVDAAF-QSIAQAAIAQKGTD 181



>EAY07156.1 on AAB86482  RabA  (Invasion)  [Entamoeba histolytica]
          Length = 219

 Score = 74.7 bits (182), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 84/159 (52%), Gaps = 13/159 (8%)

Query: 11  VIGDGAVGKTSLLSVLKGEPFPERYVPTV-FDNYALDVTHNNKPYRLHIWDTAGQDEFDR 69
           +IGD  VGKT+L+       + E Y  T+  +     V  + K Y+L +WDTAGQ+++  
Sbjct: 30  LIGDVGVGKTALIQRFCFGTYTEDYDATIGIETCDKSVNLDGKMYQLQLWDTAGQEKYHS 89

Query: 70  LRPLSYQDAKVILICFELDKRASFSNLSDRWIAEVNYFCKEVK------MILVGCKADLR 123
           L  L ++D K +L+ F++D++ SF +  D W+   + F   +       ++LVG K DL 
Sbjct: 90  LVRLYFKDIKGVLLVFQIDRQESFDHCKD-WL---DLFYSSISSGFTPPVLLVGNKCDLI 145

Query: 124 EQSNESVSDEEALAFAKQHGGIPYIATSARTGLNVDKVF 162
             S   VS E    F  ++ G+ YI TS++   NV + F
Sbjct: 146 GSSTR-VSKESVDRFVSEN-GLEYIETSSKENTNVQEAF 182



>EAY07156.1 on BAD34969  Rab7B  (Establishment)  [Entamoeba histolytica]
          Length = 207

 Score = 72.8 bits (177), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 90/177 (50%), Gaps = 7/177 (3%)

Query: 3   KANEIKLVVIGDGAVGKTSLLSVLKGEPFPERYVPTVFDNYAL-DVTHNNKPYRLHIWDT 61
           K N  K++++GD  VGKTSLL+    + F  +Y  T+  ++   D+T N++   L IWDT
Sbjct: 7   KRNLFKIIILGDSGVGKTSLLNQYVTKQFSSQYKATIGADFMTKDITINDQQISLQIWDT 66

Query: 62  AGQDEFDRLRPLSYQDAKVILICFELDKRASFSNLS---DRWIAEVNYFCKE-VKMILVG 117
           AG + F       Y+ A V ++  ++    SF +L      +I+  N    E    +++ 
Sbjct: 67  AGHERFASFGTAFYRGADVCMLVCDVTVAESFEHLEVWRKEFISGGNPSDPESFPYVVIA 126

Query: 118 CKADLREQSNESVSDEEALAFAKQHGGIPYIATSARTGLNVDKVFPTAIDITSIKKK 174
            K D  E +N +VS ++   +   + G  +   SA+TG NVD  F  A  + ++++K
Sbjct: 127 NKNDC-EPANRAVSSDQLRQWCVTN-GYEFFECSAKTGWNVDSAFTKAATLVAMRQK 181



>EAY07156.1 on XP_652776  Rab11B  (Establishment)  [Entamoeba histolytica]
          Length = 211

 Score = 70.5 bits (171), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 85/161 (52%), Gaps = 6/161 (3%)

Query: 8   KLVVIGDGAVGKTSLLSVLKGEPFPERYVPTVFDNYAL-DVTHNNKPYRLHIWDTAGQDE 66
           K+V++G+  VGK++LL       F      T+   +A   + + +K  R  IWDTAGQ+ 
Sbjct: 12  KIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSINYCDKNIRAQIWDTAGQER 71

Query: 67  FDRLRPLSYQDAKVILICFELDKRASFSNLSDRWIAEVNYFC-KEVKMILVGCKADLREQ 125
           +  +    Y+ A   L+ +++ K+ SF ++ ++W+AE++    K+V  +++G K DL + 
Sbjct: 72  YRAITNAYYRGALGALVVYDITKKTSFESV-EKWLAELHENADKKVVQMVIGNKCDLSQT 130

Query: 126 SNESVSDEEALAFAKQHGGIPYIATSARTGLNVDKVFPTAI 166
                S+ E LA   +     +  TSA  G NV++ F T +
Sbjct: 131 REVQTSEGEELA---KKNNAFFFETSALDGSNVEEAFMTLL 168



>EAY07156.1 on PFE0340c  ROM4  (Invasion)  [Plasmodium falciparum]
          Length = 759

 Score = 23.9 bits (50), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 13/23 (56%), Positives = 14/23 (60%)

Query: 2   SKANEIKLVVIGDGAVGKTSLLS 24
           SK N  KL V GD  + K SLLS
Sbjct: 235 SKRNSQKLSVYGDNKLKKGSLLS 257



>EAY07156.1 on XP_818708   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 929

 Score = 23.5 bits (49), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 43  YALDVTHNNKPYRLHIWDTAGQDEFDRLRPLSYQD 77
           YA +  + NK   LH+W T      D + P+S +D
Sbjct: 382 YAKETQNENKKSELHLWLTDNTHIVD-IGPVSRED 415




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07157.1 hypothetical protein TVAG_197700 [Trichomonas
vaginalis G3]
         (396 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAY44832  MSA-1  (Invasion)  [Babesia bovis]                           27   2.4  
XP_829789  VSG  (Establishment)  [Trypanosoma brucei]                  27   2.5  
AAY44831  MSA-1  (Invasion)  [Babesia bovis]                           27   2.7  
XP_001351877  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   4.1  
XP_001350797  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   4.2  
XP_001609618  variant erythrocyte surface antigen-1, alpha subun...    26   4.3  

>EAY07157.1 on AAY44832  MSA-1  (Invasion)  [Babesia bovis]
          Length = 308

 Score = 26.6 bits (57), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 8/76 (10%)

Query: 175 QVKELHTNLNKISHDIKKYTKICNNQQNRRISSKLESYINNLDDIKTEGSKYNLICTALL 234
           QV+   T L K+   IK    I + + N  ++S            KT+  K+N I  +L+
Sbjct: 81  QVENTFTYLYKVKEMIKNNPMISSEKFNEALASSFSG--------KTDEEKFNAIFDSLM 132

Query: 235 EILHEIHPTNKTLQEV 250
            + + IH  +K L+ +
Sbjct: 133 SMFNNIHHMDKFLKSL 148



>EAY07157.1 on XP_829789  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 526

 Score = 26.6 bits (57), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 9/62 (14%)

Query: 315 QEQLYDDHYKKLKKKEHELRARLQKVL-------DSIPKEPIYTKM--STFSMAANADHE 365
           QE L  DH K ++ + HEL   LQ +        D+  KE I T +       A+N D  
Sbjct: 136 QETLARDHLKHIRTRAHELAKELQSIQPPSDAPKDNTAKETIATAVYGENAKPASNPDPS 195

Query: 366 KI 367
           K+
Sbjct: 196 KV 197



>EAY07157.1 on AAY44831  MSA-1  (Invasion)  [Babesia bovis]
          Length = 310

 Score = 26.6 bits (57), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 8/76 (10%)

Query: 175 QVKELHTNLNKISHDIKKYTKICNNQQNRRISSKLESYINNLDDIKTEGSKYNLICTALL 234
           QV+   T L K+   IK    I + + N  ++S            KT+  K+N I  +L+
Sbjct: 81  QVENTFTYLYKVKEMIKNNPMISSEKFNEALASSFSG--------KTDEEKFNAIFDSLM 132

Query: 235 EILHEIHPTNKTLQEV 250
            + + IH  +K L+ +
Sbjct: 133 SMFNNIHHMDKFLKSL 148



>EAY07157.1 on XP_001351877  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2270

 Score = 26.2 bits (56), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 11/74 (14%)

Query: 290  PEYKQQNINSLTEIINSIVEKRLKSQEQLYDDHYKKLKKKEHEL-------RARLQKVLD 342
            P+Y   N+ S  ++IN      L S  Q  D + + LK+KE+EL       +  +  V  
Sbjct: 2026 PKYVSNNVYSGIDLIND----SLNSGNQHIDIYDELLKRKENELFGTNHVKQTSIHSVAK 2081

Query: 343  SIPKEPIYTKMSTF 356
             I  +PI+ +++ F
Sbjct: 2082 PISDDPIHNQLNLF 2095



>EAY07157.1 on XP_001350797  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2287

 Score = 26.2 bits (56), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 60/135 (44%), Gaps = 21/135 (15%)

Query: 218 DIKTEGSKYNLICTALLEILHEIHPTNKTLQEVNTSTIDEHIGEVEIAIREIPDVIRSET 277
           D + +G+  N+   A    L  +H  NK +++++++ I +      + + E+    + E 
Sbjct: 106 DHRIKGNNRNVTGGACAP-LRRLHVCNKNMEKMDSTKIKDK----NVLLAEVCYAAKYEG 160

Query: 278 QSEMLRSVYNAYPEYKQQNINSLTEIINSIVEK--------RLKSQEQLYDDHYKKLKKK 329
                +S+   Y EYKQ N +S T+I  ++           R K     YDD   + KK+
Sbjct: 161 -----KSLVEKYKEYKQPNNDSDTDICTALARSFADIGDIVRGKDLYLGYDD---EEKKQ 212

Query: 330 EHELRARLQKVLDSI 344
             EL   L+ +  +I
Sbjct: 213 RDELEENLKTIFKNI 227



>EAY07157.1 on XP_001609618  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1325

 Score = 26.2 bits (56), Expect = 4.3,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 168 MRKAVNSQVKELHTNLNKISHDIKKYTKICNNQQNRRISSKLESYINNLDD 218
           + KA N   KE+    NKIS  I K  ++   +  +++   LE   +N+D+
Sbjct: 770 LEKATNKDGKEVDPGKNKISEAINKVLEML-KEMEKQLKEVLEKEQSNMDE 819




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07159.1 hypothetical protein TVAG_197720 [Trichomonas
vaginalis G3]
         (217 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAY44838  MSA-1  (Invasion)  [Babesia bovis]                           28   0.31 
AAY44835  MSA-1  (Invasion)  [Babesia bovis]                           28   0.32 
XP_001351561  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   1.8  
XP_001348946  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   1.8  
XP_001349740  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   3.4  
XP_001349514  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   7.5  

>EAY07159.1 on AAY44838  MSA-1  (Invasion)  [Babesia bovis]
          Length = 266

 Score = 28.1 bits (61), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 2/60 (3%)

Query: 95  IYEAMNSYYRHNKKINSCLTKDL--VDIGLIRNEKDISNLKDNLEKLLEKYKSITKNNRF 152
           +YE + ++Y    K+ S L ++L  V  G  +    ++N KD L K+ E  KS+  +N+F
Sbjct: 43  LYEDIKTFYNLMIKLESSLNEELEKVHAGSEQMAYQVANTKDGLIKMKETAKSLKDDNQF 102



>EAY07159.1 on AAY44835  MSA-1  (Invasion)  [Babesia bovis]
          Length = 270

 Score = 28.1 bits (61), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 2/60 (3%)

Query: 95  IYEAMNSYYRHNKKINSCLTKDL--VDIGLIRNEKDISNLKDNLEKLLEKYKSITKNNRF 152
           +YE + ++Y    K+ S L ++L  V  G  +    ++N KD L K+ E  KS+  +N+F
Sbjct: 43  LYEDIKTFYNLMIKLESSLNEELEKVHAGSEQMAYQVANTKDGLIKMKETAKSLKDDNQF 102



>EAY07159.1 on XP_001351561  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3553

 Score = 26.2 bits (56), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 8/63 (12%)

Query: 109 INSCLTKDLVDIGLIRNEKDI-------SNLKDNLEKLLEK-YKSITKNNRFADFTGFFV 160
           I + L +   DIG I   KD+         L++NL K+    YK +    ++A+   ++ 
Sbjct: 183 ICTSLARSFADIGDIIRGKDLYRRDSRTDKLEENLRKIFANIYKELKNGKKWAEAKEYYQ 242

Query: 161 DDG 163
           DDG
Sbjct: 243 DDG 245



>EAY07159.1 on XP_001348946  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3553

 Score = 26.2 bits (56), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 8/63 (12%)

Query: 109 INSCLTKDLVDIGLIRNEKDI-------SNLKDNLEKLLEK-YKSITKNNRFADFTGFFV 160
           I + L +   DIG I   KD+         L++NL K+    YK +    ++A+   ++ 
Sbjct: 183 ICTSLARSFADIGDIIRGKDLYRRDSRTDKLEENLRKIFANIYKELKNGKKWAEAKEYYQ 242

Query: 161 DDG 163
           DDG
Sbjct: 243 DDG 245



>EAY07159.1 on XP_001349740  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3346

 Score = 25.4 bits (54), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 16/43 (37%), Positives = 22/43 (51%)

Query: 90  ETLDSIYEAMNSYYRHNKKINSCLTKDLVDIGLIRNEKDISNL 132
           ETLDS+ E+      +  K   C   D+++I L R EK I N 
Sbjct: 670 ETLDSMKESTECIDPNKPKGKPCNNNDVINILLNRLEKQIDNC 712



>EAY07159.1 on XP_001349514  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2120

 Score = 24.3 bits (51), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 136 LEKLLEKYKSITKNNRFADFTGF 158
           LE  +EK +  TK  ++ D  GF
Sbjct: 330 LENAIEKCRGKTKGEKYCDLNGF 352




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07169.1 Endoribonuclease L-PSP family protein
[Trichomonas vaginalis G3]
         (124 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_821137   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   1.3  
XP_001349219  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   1.7  
XP_810237   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   2.3  
XP_819907   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   2.8  
XP_821078   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   5.0  

>EAY07169.1 on XP_821137   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 956

 Score = 25.0 bits (53), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 7/40 (17%)

Query: 22 LCGNTLYTSGNVAQSADGTVPKTI-------GEQTTLSLQ 54
          +C NT     +V  S  G +PKT        GE+T +SL+
Sbjct: 56 MCCNTGGVEADVRASGPGALPKTYFVWRDKKGEETVISLR 95



>EAY07169.1 on XP_001349219  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2595

 Score = 25.0 bits (53), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%)

Query: 44   TIGEQTTLSLQNMEKVIKAAGMDK----TNVVKCNCYLANMDDFAE 85
            TI ++   SL+ +EK +K  G DK    T      C L N+ D  E
Sbjct: 1587 TIDKKNYTSLEELEKTLKCNGSDKSQNGTQKDIIECLLGNLKDKIE 1632



>EAY07169.1 on XP_810237   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 922

 Score = 24.6 bits (52), Expect = 2.3,   Method: Composition-based stats.
 Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 3/45 (6%)

Query: 9   DAPPPIGPYCLARLCGNTLYTSGNVAQSADGTVPKTIGEQTTLSL 53
           D  PP+G   L     N    SG+V+ SA  T P   GE +   L
Sbjct: 742 DGQPPLGRESLNE---NEGVGSGDVSPSAVSTAPPLAGEGSVKQL 783



>EAY07169.1 on XP_819907   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 943

 Score = 24.3 bits (51), Expect = 2.8,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)

Query: 30  SGNVAQSADGTVPKTIGEQTTLSLQNMEKVIKAAGMDKT 68
           +GNV  +AD   P T+GE       N+E   ++ G  +T
Sbjct: 844 AGNV-NAADANAPTTMGEGQDGPAVNLEASARSGGNGET 881



>EAY07169.1 on XP_821078   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 940

 Score = 23.5 bits (49), Expect = 5.0,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 19/37 (51%)

Query: 46  GEQTTLSLQNMEKVIKAAGMDKTNVVKCNCYLANMDD 82
           GE  T +L  + +V      +K  +V+C    AN++D
Sbjct: 327 GESWTEALGTLSRVWGNKKGEKVEIVRCGFITANVED 363




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07174.1 hypothetical protein TVAG_197870 [Trichomonas
vaginalis G3]
         (989 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PF14_0553  Falcipain1  (Cysteine protease)  [Plasmodium falciparum]    34   0.047

>EAY07174.1 on PF14_0553  Falcipain1  (Cysteine protease)  [Plasmodium falciparum]
          Length = 569

 Score = 33.9 bits (76), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 39/192 (20%)

Query: 596 LDSKAYNNENNPTNDQEEDITRSKDEFVN--DVI----------------KSISQKVEEV 637
           L+S+ YNN+NN +N + + I   K+E++N   ++                K +S  + ++
Sbjct: 111 LNSETYNNKNNVSNIKNDSIKSKKEEYINLERILLEKYKKFINENNEENRKELSNILHKL 170

Query: 638 IKEDDELAETEQKQDEEGIYVLNDKENEPFDEKIS-DAQIKDEIKYAQEDSIEEMNEEEE 696
           + E ++L   E+K D++ +Y++ND     +DEK + +  + +E+KY +ED I  +    +
Sbjct: 171 L-EINKLILREEKDDKK-VYLINDN----YDEKGALEIGMNEEMKYKKEDPINNIKYASK 224

Query: 697 IKTTGKSGENVQQNIE---NKEEI-KENIESTDNNNKEENNKH----------QNEEETK 742
                K    V +NI+    K EI K N  S  N+NK   N             +EEE K
Sbjct: 225 FFKFMKEHNKVYKNIDEQMRKFEIFKINYISIKNHNKLNKNAMYKKKVNQFSDYSEEELK 284

Query: 743 EDFGNKEEVIDH 754
           E F     V +H
Sbjct: 285 EYFKTLLHVPNH 296




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07176.1 hypothetical protein TVAG_197900 [Trichomonas
vaginalis G3]
         (295 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_808402   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.48 
XP_001609167  variant erythrocyte surface antigen-1, alpha subun...    28   1.0  
XP_001610567  variant erythrocyte surface antigen-1, alpha subun...    27   1.4  
XP_828100  VSG  (Establishment)  [Trypanosoma brucei]                  26   2.3  
XP_001611736  variant erythrocyte surface antigen-1, alpha subun...    26   2.7  
XP_001610568  variant erythrocyte surface antigen-1, alpha subun...    25   5.3  
XP_001611442  variant erythrocyte surface antigen-1, alpha subun...    25   6.6  

>EAY07176.1 on XP_808402   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 846

 Score = 28.5 bits (62), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query: 137 DPEQIELRESSIRAAENGDFETAMKLRDEAVALGISKMEKKT 178
           +P  +    S+IR    G  E  +K+ D+A +LG S   K T
Sbjct: 756 EPHTLGAVSSTIRGGHQGTEEKLLKISDDAGSLGTSNSAKTT 797



>EAY07176.1 on XP_001609167  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1317

 Score = 27.7 bits (60), Expect = 1.0,   Method: Composition-based stats.
 Identities = 24/102 (23%), Positives = 46/102 (45%), Gaps = 10/102 (9%)

Query: 171 ISKMEKKTEQLNQQFETKRKELLTKFGNEILGLTRQLNNEQAEYTKRYTDKLSDMKSTRE 230
           +  M+K    +N +   K KE+L K G  ++    QL N Q     R  ++++ +K   E
Sbjct: 647 VENMKKGLVGVNGEVALKVKEVLQKIGEVVV----QLGNAQEALEGRKGEEITKVKDKLE 702

Query: 231 NSLSALTQQYMKFASKFLQ-DEAAVRG-----ANKLQELYIN 266
            +   L +   +  ++  + ++  + G      NKL+EL  N
Sbjct: 703 GAKGELVKAQKELEAEVQKVNKGGLNGKLGAAKNKLEELTRN 744



>EAY07176.1 on XP_001610567  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1315

 Score = 26.9 bits (58), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 39/96 (40%), Gaps = 3/96 (3%)

Query: 174 MEKKTEQLNQQFETKRKELLTKFGNEILGL---TRQLNNEQAEYTKRYTDKLSDMKSTRE 230
           M +   ++N++   K KE+L   GN ++ L      L  ++ E  +    KL + K   +
Sbjct: 660 MRETLGKVNEEVALKVKEVLQAIGNVVVQLGNAQEALEGKKKEAIEGVKAKLQEAKEGLD 719

Query: 231 NSLSALTQQYMKFASKFLQDEAAVRGANKLQELYIN 266
            + +AL +   K     L      +   KL  L  N
Sbjct: 720 KARTALEEAAKKVNGDGLSGNELTKAKTKLDALAKN 755



>EAY07176.1 on XP_828100  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 518

 Score = 26.2 bits (56), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 18/139 (12%)

Query: 8   KRIAEQI-EKIKTDTTAETDKLRSLQKEAIKTLKYEIAADIAKKIEE---INKHASENKF 63
           K+IAE +  KI        D+ R LQ+ A+   KYEIAA  A   E+   IN  A + K 
Sbjct: 48  KKIAEHLRSKI-------VDRNRGLQEAALTASKYEIAAAAADSPEDQCLINALAVKAKQ 100

Query: 64  AI-IRN----EFIDELVTSLENKNQESEDIEAQKRYDELNIKIKYDRLFQDLKKQQIVSL 118
            + +R     E  + L++ LE+  ++   + A+    +L + +K   L          ++
Sbjct: 101 VLKLRQKQAEEPPNALLSGLEHSKEQRGVLLAEIENSKLAVTVKAGTLHG--TNSAGTTM 158

Query: 119 YQFEQQFLKDRDTEFNRRD 137
            Q E       D   ++ D
Sbjct: 159 LQLETAHSNSADCSISQPD 177



>EAY07176.1 on XP_001611736  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1365

 Score = 26.2 bits (56), Expect = 2.7,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 34/71 (47%), Gaps = 5/71 (7%)

Query: 41   YEIAADIAKKIEEINKHASENKFAIIRNEFIDELVTSLENKNQESEDIEAQKRYDELNIK 100
            YE   +   + + +NKH   +      +EF+D L   +EN  ++ +D   Q ++   N+ 
Sbjct: 1208 YEQKEEEDLQFDIVNKHNPRHC-----HEFLDSLKKVIENAEKDKQDPSQQDKHPLTNLL 1262

Query: 101  IKYDRLFQDLK 111
             +  +L  D++
Sbjct: 1263 TQVGQLQYDIR 1273



>EAY07176.1 on XP_001610568  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1329

 Score = 25.4 bits (54), Expect = 5.3,   Method: Composition-based stats.
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)

Query: 49   KKIEEINKHASENKFAIIR-NEFIDELVTSLENKNQESEDIEAQKRYDELNIKIKYD 104
            +K EE   ++ EN     R +EF+D L   LE+K   S+D        ++  K++YD
Sbjct: 1205 QKEEEKGDYSIENTKTTKRCHEFLDSLNKVLEDKQATSQDHPLTNLLSQVG-KLQYD 1260



>EAY07176.1 on XP_001611442  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1350

 Score = 25.0 bits (53), Expect = 6.6,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 1/63 (1%)

Query: 49   KKIEEINKHASENKFAIIRNEFIDELVTSLENKNQESEDIEAQKRYDELNIKIKYDRLFQ 108
            K+ E++     + K A   +EF+D L   +EN  ++ +D +A K +   N+  +  +L  
Sbjct: 1223 KEEEDLQFDIEDTKKAKQCHEFLDSLKKVIENAEKDKQD-QATKEHPLTNLLTQVGQLQY 1281

Query: 109  DLK 111
            D++
Sbjct: 1282 DIR 1284




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07179.1 TKL family protein kinase [Trichomonas
vaginalis G3]
         (768 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    53   3e-08

>EAY07179.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 52.8 bits (125), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 85/200 (42%), Gaps = 10/200 (5%)

Query: 212 DAFTIGNTIGTGTFGSVHIGTMNATNRKVAVKVLNTQILGGRQLETFKREVWTMATLNHP 271
           D++ I   IG G F  V  G    T  K  +K+L        + E    +         P
Sbjct: 53  DSYEIVRKIGRGKFSEVFEGLNTVTKDKCVIKILKPVKKKKIKREIKILQ----NLRGGP 108

Query: 272 SILRLVGVTLTPPFCIVTELLKGSLYDRLKFLSPT----KRSIIALKVAQGMEQLHAARI 327
           +I++L+ +   P     + + +       K L PT           ++ + M   H+  I
Sbjct: 109 NIIKLLDIVKDPQSRTPSLIFEHVNNTDFKTLYPTLTIQDIKYYIYQLLKAMNYCHSQGI 168

Query: 328 IHRDLKSANILLD-EDDMPRVCDFGLVGFKTGATRTGY-VGTAQWMAPEVLRSSPFYDEK 385
           +HRD+K  N+++D E  + R+ D+GL  F          V T  +  PE+L    +YD  
Sbjct: 169 MHRDIKPHNVMIDHEKKILRLIDWGLAEFYHPEQEYSVRVATRYYKGPELLVDMRYYDYS 228

Query: 386 VDVYSFGVLLWEMLTLHEPY 405
           +D++S G +L  ++   EP+
Sbjct: 229 LDIWSIGCMLAGIIFKKEPF 248




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07184.1 Hsp20/alpha crystallin family protein
[Trichomonas vaginalis G3]
         (110 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_808176   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   2.3  
XP_821693   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   2.8  
XP_812988   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   4.9  
XP_814441   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   8.1  

>EAY07184.1 on XP_808176   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 889

 Score = 24.3 bits (51), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 11/19 (57%), Positives = 12/19 (63%)

Query: 88  LNEGLLTITIPKTKKREIK 106
           LNEG L   +  TKKRE K
Sbjct: 247 LNEGTLAFPVEATKKREDK 265



>EAY07184.1 on XP_821693   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 834

 Score = 23.9 bits (50), Expect = 2.8,   Method: Composition-based stats.
 Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 4/31 (12%)

Query: 67  GSIESSWKVPKDGDAEKITAALNEGLLTITI 97
           G++   W  PKDG+ +    A+  G +T TI
Sbjct: 358 GTLSRVWSSPKDGEGK----AVRSGFITATI 384



>EAY07184.1 on XP_812988   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 889

 Score = 23.1 bits (48), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 11/25 (44%), Positives = 17/25 (68%)

Query: 59  KIDSGRVYGSIESSWKVPKDGDAEK 83
           K++ G +   +E + KV K+GDAEK
Sbjct: 244 KMEDGTLVFPVEGARKVKKEGDAEK 268



>EAY07184.1 on XP_814441   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 931

 Score = 22.7 bits (47), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)

Query: 1   MSVTKTTITAPSDSFETAASYLINIELPGIAKKDVNID 38
           + V KTT T PS  +ET   Y + I L    +  V +D
Sbjct: 626 LCVDKTT-TKPSSGWETETQYQVAIVLQNGTQGSVYVD 662




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07200.1 Leucine Rich Repeat family protein
[Trichomonas vaginalis G3]
         (910 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001348275  RAP1  (Invasion)  [Plasmodium falciparum]                27   8.1  

>EAY07200.1 on XP_001348275  RAP1  (Invasion)  [Plasmodium falciparum]
          Length = 782

 Score = 26.6 bits (57), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 14/67 (20%)

Query: 686 CLPHLRALDLSNNKIGDSLCKI---LVTFQLHNLKSLNLSYNSIKTHPILPRSNFPNIEL 742
           CL ++  LDL   ++ D+ CK    + +F  H+L+      + +K H        PNI+ 
Sbjct: 390 CLKNMGVLDL---ELNDTQCKFGTCIGSFGEHHLRLYEFENDLLKFH--------PNIDY 438

Query: 743 LDLSHNY 749
           L L+  Y
Sbjct: 439 LTLADGY 445




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07201.1 Dynein light chain 2B, cytoplasmic, putative
[Trichomonas vaginalis G3]
         (99 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001349720  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   2.3  
XP_001351321  PfEMP1  (Establishment)  [Plasmodium falciparum]         22   9.8  

>EAY07201.1 on XP_001349720  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 88

 Score = 23.1 bits (48), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 23 LDAEYKVIHSAFKNSDPAKYAEKLPP 48
          L   +K+I+   K +  AKYA   PP
Sbjct: 27 LQENFKIIYGKIKGTLGAKYARDDPP 52



>EAY07201.1 on XP_001351321  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3467

 Score = 21.9 bits (45), Expect = 9.8,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 18/26 (69%)

Query: 3   DIIETLKRIEANKSVIGTLVLDAEYK 28
           D++  +K   A+ S++G ++L A+Y+
Sbjct: 862 DVVSVIKNGNASHSLLGDVLLAAKYE 887




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07204.1 hypothetical protein TVAG_050190 [Trichomonas
vaginalis G3]
         (216 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ABO28970  gp82  (Adhesin)  [Trypanosoma cruzi]                         24   2.5  

>EAY07204.1 on ABO28970  gp82  (Adhesin)  [Trypanosoma cruzi]
          Length = 70

 Score = 23.9 bits (50), Expect = 2.5,   Method: Composition-based stats.
 Identities = 7/13 (53%), Positives = 8/13 (61%)

Query: 102 CCCFDNLYCCDCC 114
           CCCF  + CC  C
Sbjct: 48  CCCFLAVMCCATC 60




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07207.1 hypothetical protein TVAG_050220 [Trichomonas
vaginalis G3]
         (255 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAL15421  MSA-2a1  (Invasion)  [Babesia bovis]                         28   0.66 
AAL15422  MSA-2a2  (Invasion)  [Babesia bovis]                         28   0.68 
ABA06450  MSA-2a1  (Invasion)  [Babesia bovis]                         27   1.1  
XP_818196   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   6.8  
XP_001351319  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   8.6  

>EAY07207.1 on AAL15421  MSA-2a1  (Invasion)  [Babesia bovis]
          Length = 316

 Score = 27.7 bits (60), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 10/26 (38%), Positives = 18/26 (69%)

Query: 116 SVERYYKKIEMPNDNIVYNYNVFVNL 141
           S+E  +K+++MP+DN +   N FV +
Sbjct: 55  SLEEKFKEVDMPSDNSLDAINAFVEI 80



>EAY07207.1 on AAL15422  MSA-2a2  (Invasion)  [Babesia bovis]
          Length = 292

 Score = 27.7 bits (60), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 10/26 (38%), Positives = 18/26 (69%)

Query: 116 SVERYYKKIEMPNDNIVYNYNVFVNL 141
           S+E  +K+++MP+DN +   N FV +
Sbjct: 55  SLEEKFKEVDMPSDNSLDAINAFVEI 80



>EAY07207.1 on ABA06450  MSA-2a1  (Invasion)  [Babesia bovis]
          Length = 316

 Score = 26.9 bits (58), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 10/26 (38%), Positives = 17/26 (65%)

Query: 116 SVERYYKKIEMPNDNIVYNYNVFVNL 141
           S+E  +K ++MP+DN +   N FV +
Sbjct: 55  SLEEKFKDVDMPSDNSLDAINAFVEI 80



>EAY07207.1 on XP_818196   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 841

 Score = 24.6 bits (52), Expect = 6.8,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 23/51 (45%)

Query: 153 DIYSISIKNPKPSSVVNIVVYNYHLMKTGDFTESFNNEISYVIPPRSVFVA 203
           D  S   K   P +V N+++YN  L  +G   E   +  S    P S FVA
Sbjct: 694 DGSSAGSKEDVPVTVTNVLLYNRPLTFSGGNAEVEEDADSPSAEPASPFVA 744



>EAY07207.1 on XP_001351319  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2646

 Score = 24.3 bits (51), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 4/48 (8%)

Query: 136  NVFVNLNP---NSAVSDGKHDIYS-ISIKNPKPSSVVNIVVYNYHLMK 179
            NV+  ++P   N  ++ GKHD YS I + N   S   +I +Y+  L +
Sbjct: 2434 NVYSGIDPTSDNRGLTSGKHDSYSGIDLINDTLSGNQHIDIYDEVLKR 2481




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07210.1 Tyrosine phosphatase family protein
[Trichomonas vaginalis G3]
         (180 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07211.1 hypothetical protein TVAG_050260 [Trichomonas
vaginalis G3]
         (358 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609667  variant erythrocyte surface antigen-1, alpha subun...    27   2.8  
XP_806338   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   6.4  
XP_001349737  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   7.0  

>EAY07211.1 on XP_001609667  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1303

 Score = 26.6 bits (57), Expect = 2.8,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 19/34 (55%)

Query: 213 EMYTTQDKSSIILHKLSEFTDILKRHIPTVHNQL 246
           E  + +DK S ++HK+ E    L+  +P V + L
Sbjct: 766 EYSSAKDKISEVIHKIQEVLTALQTEVPQVSSHL 799



>EAY07211.1 on XP_806338   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 652

 Score = 25.4 bits (54), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 5/65 (7%)

Query: 7   DFIIFPLVQP----NPEETPIDKTIISTI-CEQTLEDYPPEDRALAWMVMLGLYPSNPNK 61
           ++++   V P    NP  T  + +++  + CE + + Y   D   AW   +G  P    K
Sbjct: 321 NWVLSKGVSPAKCYNPRITEWEGSLLMIVDCESSQKVYESRDMGTAWTEAVGTLPGVWTK 380

Query: 62  WESEK 66
            +SE+
Sbjct: 381 SKSEE 385



>EAY07211.1 on XP_001349737  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2199

 Score = 25.4 bits (54), Expect = 7.0,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 3/68 (4%)

Query: 39   YPPEDRALAWMVMLGLYPSNPNKWESEKRESIQNYWQFVDEFGVRDWHTKTFD---KAHK 95
            Y P       ++ + L PS  N   S+ +  IQN     ++F   +W+T   D      +
Sbjct: 1871 YVPGSPKYKTLIEVVLEPSGNNTTASDTQNDIQNDGIPSNKFSDNEWNTLKDDFISNMLQ 1930

Query: 96   QQQFDVPN 103
             Q  DVPN
Sbjct: 1931 NQPKDVPN 1938




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07212.1 Ubiquitin-conjugating enzyme family protein
[Trichomonas vaginalis G3]
         (162 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001611897  variant erythrocyte surface antigen-1, alpha subun...    25   2.5  
XP_815807   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   5.1  
XP_966160  PfEMP1  (Establishment)  [Plasmodium falciparum]            24   5.7  

>EAY07212.1 on XP_001611897  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1369

 Score = 25.0 bits (53), Expect = 2.5,   Method: Composition-based stats.
 Identities = 7/19 (36%), Positives = 14/19 (73%)

Query: 8   AIQRLTEERSRWRKDHPAG 26
           ++Q++T E  +WRKD+ + 
Sbjct: 784 SLQQITSEAQKWRKDYSSA 802



>EAY07212.1 on XP_815807   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 899

 Score = 24.3 bits (51), Expect = 5.1,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 17/31 (54%)

Query: 73  INAPIAKFDPIVPHVNVFPSGKVCLSILTDG 103
           ++  ++K  P +       +G VC S++TDG
Sbjct: 481 VDERVSKLCPTLSAAESASTGTVCTSVVTDG 511



>EAY07212.1 on XP_966160  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2394

 Score = 23.9 bits (50), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 36   NGNLDLFNWECLIPGPEKSLWEGGF 60
            NG+    NW+C+ P  EKS  +G  
Sbjct: 1230 NGHEKFPNWKCVTPSGEKSGDKGAI 1254




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07217.1 hypothetical protein TVAG_050320 [Trichomonas
vaginalis G3]
         (103 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAL15422  MSA-2a2  (Invasion)  [Babesia bovis]                         22   8.1  

>EAY07217.1 on AAL15422  MSA-2a2  (Invasion)  [Babesia bovis]
          Length = 292

 Score = 22.3 bits (46), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 5/69 (7%)

Query: 26  LREVRVNENLSQ-NVGISDQIDRMIEQENEMQLAELEQNI----INEEEYYARMAAFNDY 80
           LR   + + LS+ N  ++D   R++  +N       +++I     N ++Y   +   ND+
Sbjct: 117 LRVPLIKKMLSEFNAFLNDNPQRLLADKNGEVTKYYKKHISAKDANVKDYTFLVKFCNDF 176

Query: 81  LDSLSPEER 89
           LDS SP  R
Sbjct: 177 LDSKSPFMR 185




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07218.1 hypothetical protein TVAG_050330 [Trichomonas
vaginalis G3]
         (562 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351319  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   1.3  
AAL38218  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   27   5.5  
AAL38221  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   27   5.7  
AAL38220  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   27   5.7  
XP_821904   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   5.8  
XP_001349030  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   6.2  
AAL38222  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   26   6.5  
XP_821898   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   9.3  

>EAY07218.1 on XP_001351319  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2646

 Score = 28.5 bits (62), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 20/69 (28%)

Query: 402 GHDYFL--------PNLT-KMCRTVTNTAVKVIKKFSPITYLFFKLSGNTDLVFTYSEYV 452
           G++YF         P+LT K CR   + A K IK            SGN ++V TY +YV
Sbjct: 283 GNNYFRATCGDEKNPSLTSKQCRCDKDKAGKPIKG-----------SGNVNIVPTYFDYV 331

Query: 453 LIYKRSFSD 461
             Y R F +
Sbjct: 332 PQYLRWFEE 340



>EAY07218.1 on AAL38218  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2977

 Score = 26.6 bits (57), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)

Query: 274  EEIKKDLIKQYKMLQVQYNQMSKEQKENNNLFFPLSIVIRNDVHRTDREL 323
            +EIK ++IK +K  +  + ++ KE K+ N  F  + +VI N +   DR++
Sbjct: 1358 QEIKNNIIKIFKEFESAHKEIKKESKQINKEFTKMDVVI-NQLRDIDRQM 1406



>EAY07218.1 on AAL38221  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2965

 Score = 26.6 bits (57), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)

Query: 274  EEIKKDLIKQYKMLQVQYNQMSKEQKENNNLFFPLSIVIRNDVHRTDREL 323
            +EIK ++IK +K  +  + ++ KE K+ N  F  + +VI N +   DR++
Sbjct: 1354 QEIKNNIIKIFKEFESAHKEIKKESKQINKEFTKMDVVI-NQLRDIDRQM 1402



>EAY07218.1 on AAL38220  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2957

 Score = 26.6 bits (57), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)

Query: 274  EEIKKDLIKQYKMLQVQYNQMSKEQKENNNLFFPLSIVIRNDVHRTDREL 323
            +EIK ++IK +K  +  + ++ KE K+ N  F  + +VI N +   DR++
Sbjct: 1348 QEIKNNIIKIFKEFESAHKEIKKESKQINKEFTKMDVVI-NQLRDIDRQM 1396



>EAY07218.1 on XP_821904   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 851

 Score = 26.2 bits (56), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 14/39 (35%), Positives = 20/39 (51%)

Query: 303 NLFFPLSIVIRNDVHRTDRELKAFRNDKGEGLKILSELL 341
           +LFFP  + +  D+      L   +ND+G    I SELL
Sbjct: 94  SLFFPSLVEVNGDLFAVAGSLSTKKNDEGGFAGIASELL 132



>EAY07218.1 on XP_001349030  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2215

 Score = 26.2 bits (56), Expect = 6.2,   Method: Composition-based stats.
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 4/40 (10%)

Query: 437 KLSGNTDLVFTYSEYVLIYKRSFSDIWYLWLGMLCMENPK 476
           K SGN ++V TY +YV  Y R F +    W    C +  K
Sbjct: 294 KTSGNVNIVPTYFDYVPQYLRWFEE----WAEDFCRKKKK 329



>EAY07218.1 on AAL38222  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2976

 Score = 26.2 bits (56), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)

Query: 274  EEIKKDLIKQYKMLQVQYNQMSKEQKENNNLFFPLSIVIRNDVHRTDREL 323
            +EIK ++IK +K  +  + ++ KE K+ N  F  + +VI N +   DR++
Sbjct: 1361 QEIKNNIIKIFKEFKSAHKEIKKESKQINKEFTKMDVVI-NQLRDIDRQM 1409



>EAY07218.1 on XP_821898   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 846

 Score = 25.8 bits (55), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 14/39 (35%), Positives = 20/39 (51%)

Query: 303 NLFFPLSIVIRNDVHRTDRELKAFRNDKGEGLKILSELL 341
           +LFFP  + +  D+      L   +ND+G    I SELL
Sbjct: 94  SLFFPSLVELNGDLFAVAGSLSTKKNDEGGFAGIASELL 132




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07219.1 hypothetical protein TVAG_050340 [Trichomonas
vaginalis G3]
         (303 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_810140   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           34   0.012
XP_812956   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.17 
XP_805038   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   0.29 
XP_001608668  variant erythrocyte surface antigen-1, alpha subun...    28   1.0  
XP_812620   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.6  
XP_804223   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.9  
XP_819719   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.2  
XP_809489   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   3.0  
XP_815749   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   3.3  
XP_820141   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   6.3  
XP_808156   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   8.2  
XP_818662   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   8.7  
XP_001350413  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   9.7  

>EAY07219.1 on XP_810140   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 923

 Score = 33.9 bits (76), Expect = 0.012,   Method: Composition-based stats.
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 67  LAKSQKEQEAKSE-ESPKEEIPAKEEEKPVEDKKQEEAPKAPEEAVIPSNE 116
           +++S++ + A+SE E PK      EE KPVE + +E  P  P  A   + E
Sbjct: 754 VSESEEPKPAESESEEPKPAESESEEPKPVESESEEPKPAEPNAATSSARE 804



>EAY07219.1 on XP_812956   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1005

 Score = 30.0 bits (66), Expect = 0.17,   Method: Composition-based stats.
 Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 6/80 (7%)

Query: 102 EAPKAPEEAVIPSNESATPIETEKTDIEALKVEETKEEVEAPKSE---EKPEEVPEPMKI 158
           EA     E  + S+ S TP    +TD E    E+T +      SE   E  +EVP+ +  
Sbjct: 880 EAGDGNSERTMGSDSSLTP---SRTDAEPTSAEDTDDVSRTEGSEFYFEDGKEVPQTVDT 936

Query: 159 SPSFSEELPKLEETPVLEEA 178
            P  +   P  E TP+ + A
Sbjct: 937 KPENTNTTPGGEGTPLTKGA 956



>EAY07219.1 on XP_805038   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 927

 Score = 29.3 bits (64), Expect = 0.29,   Method: Composition-based stats.
 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 75  EAKSEESPKEEIPAKEEEKPVEDKKQEEAPKAPEEAVIPSNE 116
           E KSEE PK      EE KP E + +E  P  P  A   + E
Sbjct: 756 EPKSEE-PKPAESRPEEPKPAESESEEPKPAEPNAATSSARE 796



>EAY07219.1 on XP_001608668  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1337

 Score = 27.7 bits (60), Expect = 1.0,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 43/83 (51%), Gaps = 11/83 (13%)

Query: 62  RAEKRLAKSQKEQEAKSEESPKEEIPAKEEEKPVEDKKQEEAPKAPEEAVIPSNESATPI 121
           +AE ++ +  K++  ++++  ++   A E E  ++ K+ EEA KA E+A           
Sbjct: 711 KAESKVIEGVKQKLGEAKKELEKAKEAVESEVGMDGKELEEAKKAVEKA----------- 759

Query: 122 ETEKTDIEALKVEETKEEVEAPK 144
           +TE  ++   K+E+  + +E  K
Sbjct: 760 KTEGDNVRMAKLEKKMKALENAK 782



>EAY07219.1 on XP_812620   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1042

 Score = 26.9 bits (58), Expect = 1.6,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 32/85 (37%)

Query: 102 EAPKAPEEAVIPSNESATPIETEKTDIEALKVEETKEEVEAPKSEEKPEEVPEPMKISPS 161
           EA     E  + S+ S TP +++     A   +       A  S E  +E P+ +  +P 
Sbjct: 915 EAGDRNSERTMGSDSSLTPSKSDAEPTTAEDADNISRTERAEVSSENGKEAPQTVDTAPG 974

Query: 162 FSEELPKLEETPVLEEAKVEPESSI 186
            +   P   E P    A    ++ I
Sbjct: 975 NTSTAPGETEIPSESNATTPSDTDI 999



>EAY07219.1 on XP_804223   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 746

 Score = 26.6 bits (57), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 6/80 (7%)

Query: 102 EAPKAPEEAVIPSNESATPIETEKTDIEALKVEETKEEVEAPKSE---EKPEEVPEPMKI 158
           EA     E  + S+ S TP    +TD E    E+T +      SE   E  +EVP+ +  
Sbjct: 621 EAGDGNSERTMGSDSSLTP---SRTDAEPTSAEDTDDVSRTEGSEFYFEDGKEVPQTVDT 677

Query: 159 SPSFSEELPKLEETPVLEEA 178
            P  +   P  E TP  + A
Sbjct: 678 KPENTNTTPGGEGTPSTKGA 697



>EAY07219.1 on XP_819719   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1053

 Score = 26.6 bits (57), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 59/156 (37%), Gaps = 22/156 (14%)

Query: 58  NKKTRAEKRLAKSQKEQEAKSEE-----------------SPKEEIPAKEEEKPVEDKKQ 100
           NKKT A    + S    + K  E                 SP  E  +  +    ED   
Sbjct: 797 NKKTAASATYSDSHAVADTKRREEQMEKAANDVDDLPPPLSPAPEAASGHKSPDAEDALG 856

Query: 101 EEAPKAPEEAVIPSNESATPIETEKTD---IEALKVEETKEEVEAPKSEEKPEEVPEPMK 157
            E P+  EE+++P    +T  ET + D   +++   ++  ++   P   E  ++  EP  
Sbjct: 857 VEHPEQEEESLLPIVAGSTVDETSEMDEAILQSRTSDDPAQQTTLPLLSEGVDD--EPSS 914

Query: 158 ISPSFSEELPKLEETPVLEEAKVEPESSIKQSKSEE 193
           +S S S +    EE      A V   S +  S + E
Sbjct: 915 LSTSTSNQRSDREEKEAHSHAAVGTNSGLNSSNTTE 950



>EAY07219.1 on XP_809489   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 787

 Score = 26.2 bits (56), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 5/116 (4%)

Query: 81  SPKEEIPAKEEEKPVEDKKQEEAPKAPEEAVIPSNESATPIETEKTD---IEALKVEETK 137
           SP  E     +    ED    E P+  EE+++P    +T  ET +TD   +++   ++  
Sbjct: 571 SPAPEAANGHKSPDAEDALGVEHPEQEEESLLPIVAGSTVDETSETDEAILQSRTSDDPA 630

Query: 138 EEVEAPKSEEKPEEVPEPMKISPSFSEELPKLEETPVLEEAKVEPESSIKQSKSEE 193
           ++   P   E  ++  EP  +S S S +    EET     A V   S    S + E
Sbjct: 631 QQTTLPLVSEGVDD--EPSSLSTSTSNQRSDREETEAHSHAAVGTNSGPDSSNTTE 684



>EAY07219.1 on XP_815749   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1053

 Score = 26.2 bits (56), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 17/66 (25%), Positives = 28/66 (42%)

Query: 102 EAPKAPEEAVIPSNESATPIETEKTDIEALKVEETKEEVEAPKSEEKPEEVPEPMKISPS 161
           EA     E  + S+ S TP E++     A   ++      A  S E   EVP+ ++ +P 
Sbjct: 927 EAGDGNSERTMGSDSSLTPSESDAETTSAGNTDDVFRTKGAEVSSENGNEVPQTVETAPG 986

Query: 162 FSEELP 167
            +   P
Sbjct: 987 NTNTTP 992



>EAY07219.1 on XP_820141   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 925

 Score = 25.0 bits (53), Expect = 6.3,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 21/37 (56%)

Query: 135 ETKEEVEAPKSEEKPEEVPEPMKISPSFSEELPKLEE 171
           E KEE+ A    +K E  P P  +S   +E+L +++E
Sbjct: 426 EKKEELIALYERQKKEGKPSPGMVSVFLTEQLKRVKE 462



>EAY07219.1 on XP_808156   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1058

 Score = 24.6 bits (52), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 6/75 (8%)

Query: 102  EAPKAPEEAVIPSNESATPIETEKTDIEALKVEET---KEEVEAPKSEEKPEEVPEPMKI 158
            EA     E  + S+ S TP    K+D+E    E+T        A  S E  +EVP+ ++ 
Sbjct: 931  EAGDGNSERTMGSDSSPTP---SKSDVEPTSAEDTDNISRTDGAEVSSENGKEVPQTVET 987

Query: 159  SPSFSEELPKLEETP 173
            +P  +   P   E P
Sbjct: 988  APGNTNTTPGETEIP 1002



>EAY07219.1 on XP_818662   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1038

 Score = 24.6 bits (52), Expect = 8.7,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 27/66 (40%)

Query: 102 EAPKAPEEAVIPSNESATPIETEKTDIEALKVEETKEEVEAPKSEEKPEEVPEPMKISPS 161
           EA     E  + S+ S TP +++     A   +       A  S E  +EVP+ +  +P 
Sbjct: 911 EAGDGNSERAMGSDSSLTPSKSDAEPTSAENTDNISRTDGAEFSSEDGKEVPQTVDTAPG 970

Query: 162 FSEELP 167
            +   P
Sbjct: 971 NTNTTP 976



>EAY07219.1 on XP_001350413  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2860

 Score = 24.6 bits (52), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 23/100 (23%), Positives = 42/100 (42%), Gaps = 24/100 (24%)

Query: 130  ALKVEETKEEVEAPKSEEKP--EEVPEPMKISPSFSEELPKLEETPVLEEAKVEPESSIK 187
            A+  E    + +A  ++  P  + +P+ ++    +SE   K++                 
Sbjct: 1004 AMTCENNGIKCDAHNAKHPPPDDYIPQRLRWMTEWSEWYCKMQ----------------- 1046

Query: 188  QSKSEELPKLEE--KEVIEQKPKEVIPARPEEDDDEFTCE 225
               S+E  KL+E  K+ +E K K  I   PE +D +  CE
Sbjct: 1047 ---SQEYEKLKEGCKKCMENKGKNCIKDTPECNDCKQACE 1083




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07220.1 hypothetical protein TVAG_050350 [Trichomonas
vaginalis G3]
         (875 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07222.1 hypothetical protein TVAG_050380 [Trichomonas
vaginalis G3]
         (941 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001218755  VSG  (Establishment)  [Trypanosoma brucei]               32   0.12 

>EAY07222.1 on XP_001218755  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 526

 Score = 32.3 bits (72), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 12/116 (10%)

Query: 138 VEKDGLFSNGDEESAIQVANDVKMLREEISK------GEEQIHDLSTQISKENAVTKQIL 191
           V KDGL S+GD  +A+Q    +K L+E IS+        +++  L+TQI   N +T   L
Sbjct: 322 VYKDGLTSSGD--NAVQW---LKHLQEAISEEARRHAASQKLQTLATQIKLLN-ITLAAL 375

Query: 192 DHIKTITENSDKMEAELANIKTNYDKTSKERNDLREKCLVVKDENKSIKETVVKNR 247
           +H  T  E+    +   A   T+ +K   +  D +EKC  +K++     ET   N+
Sbjct: 376 EHGTTAQEHVAAEDKPKAADSTDKNKECNKAKDDKEKCNELKEKGCVFNETGEANK 431




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07224.1 hypothetical protein TVAG_050400 [Trichomonas
vaginalis G3]
         (138 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001611900  variant erythrocyte surface antigen-1, alpha subun...    27   0.50 
XP_001610713  variant erythrocyte surface antigen-1, alpha subun...    26   1.1  
XP_001609667  variant erythrocyte surface antigen-1, alpha subun...    26   1.2  
XP_001609533  variant erythrocyte surface antigen-1, alpha subun...    25   1.3  
XP_001608665  variant erythrocyte surface antigen-1, alpha subun...    24   4.2  
XP_001609101  variant erythrocyte surface antigen-1, alpha subun...    23   8.8  

>EAY07224.1 on XP_001611900  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1226

 Score = 26.9 bits (58), Expect = 0.50,   Method: Composition-based stats.
 Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 12/98 (12%)

Query: 29  GTKQAKLENDIRNAIEAKKKTIDEAD-----KKLQEFIAVKEKYN-----DFKVRRLKHA 78
           G  Q  LE   +  IE  K+ +  A      K+L+E  AVK+  +     D K+  L + 
Sbjct: 703 GNAQEALEGKDKGVIEKVKRALGTAKNGLDGKELEE--AVKKGLDGMDGLDVKLGELTNG 760

Query: 79  YASLGSAIAEIEKAKSDAYEQLRNACIVSNEELEGLLN 116
              LG    ++  A S+ ++Q +NA   +  ++  +LN
Sbjct: 761 GGILGELDGKLGAANSNDFDQGKNALSSAIHKIREVLN 798



>EAY07224.1 on XP_001610713  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1294

 Score = 25.8 bits (55), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 10/78 (12%)

Query: 46  KKKTIDEADKKLQ-------EFIAVKEKYNDFKVRRLKHAYASLGSAIAEIEKAKSDAYE 98
           +KK + E   KL        E +A+K K     + ++      LG+A   +E  K +A E
Sbjct: 617 RKKRVAEMGNKLNKLPLGSGESVAMKVKT---LLEKIGEVVVQLGNAQEALEGKKKEAIE 673

Query: 99  QLRNACIVSNEELEGLLN 116
            ++ A   +  ELEG  N
Sbjct: 674 GVKGALGEAKRELEGAKN 691



>EAY07224.1 on XP_001609667  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1303

 Score = 25.8 bits (55), Expect = 1.2,   Method: Composition-based stats.
 Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 5/79 (6%)

Query: 9   KASAHIKKLRDDLE----VDRQKGGTKQAKLENDIRNAIEAKKKTIDEADKKLQEFIAVK 64
           K      KL+D LE    V  Q G  ++A LE      I+  +K + EA K L+E     
Sbjct: 653 KGGGDAGKLKDVLEKIGEVVVQLGNAQEA-LERRKGEEIKGVQKKLQEAKKGLEEARKEL 711

Query: 65  EKYNDFKVRRLKHAYASLG 83
           E   D     LK A  +LG
Sbjct: 712 ETGEDLDEDDLKEAKEALG 730



>EAY07224.1 on XP_001609533  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1162

 Score = 25.4 bits (54), Expect = 1.3,   Method: Composition-based stats.
 Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 11/99 (11%)

Query: 15  KKLRDDLEVDRQ---KGGTKQAKLE-------NDIRNAIEAKKKTIDEADKKLQEFIAVK 64
           KK++D LE   Q   + G  Q  LE       N ++ A+E  K  ++EA KK+   + VK
Sbjct: 634 KKIKDVLEAIGQVVVQLGNAQEALEGKDKEAINAVKTALEKAKGELEEAVKKVNGGLDVK 693

Query: 65  EKYNDFKVRRLKHAYAS-LGSAIAEIEKAKSDAYEQLRN 102
                  +  L +  +  LG    ++E A +  Y+  +N
Sbjct: 694 LGEAKTALEALTNGGSGILGEVGEKLETATNGEYDPGKN 732



>EAY07224.1 on XP_001608665  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1326

 Score = 23.9 bits (50), Expect = 4.2,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 6/58 (10%)

Query: 8   KKASAHIKKLRDDLEVDRQKGGTKQAKLENDIRNAIEAKKKTIDEADKKLQEFIAVKE 65
           +KA A ++K+    EV  Q G  ++A LE     AIE  K+ + EA  KL++  AVK+
Sbjct: 696 EKAKALLEKIG---EVVVQLGNAQEA-LEGKKTEAIEKVKEELTEAKTKLED--AVKK 747



>EAY07224.1 on XP_001609101  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1359

 Score = 23.1 bits (48), Expect = 8.8,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 42/97 (43%), Gaps = 2/97 (2%)

Query: 27  KGGTKQAKLENDIRNAIEAKKKTIDEADKKLQEFIAVKEKYNDFK--VRRLKHAYASLGS 84
           +G  ++ K   +I+  +EA K+ ++EA K  +   A K +    K  +   K A+    S
Sbjct: 731 EGVKEKVKALEEIKKTLEAAKEKLEEAKKTQEALEAAKGELEGAKGALTTAKKAFPGSSS 790

Query: 85  AIAEIEKAKSDAYEQLRNACIVSNEELEGLLNTTSTE 121
            I   +   S   + L  A  +  + ++ ++  T  +
Sbjct: 791 DIDPCKNIVSATIDGLHKALQLLKDAVQQIMEATRKD 827




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07227.1 hypothetical protein TVAG_050430 [Trichomonas
vaginalis G3]
         (246 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAX07978  alpha-6 giardin  (Others)  [Giardia duodenalis]              28   0.49 
Q4VPP5  Giardin subunit alpha-6  (Others)  [Giardia duodenalis]        28   0.49 
XP_001611897  variant erythrocyte surface antigen-1, alpha subun...    28   0.57 
XP_001609540  variant erythrocyte surface antigen-1, alpha subun...    26   2.6  
XP_001609034  variant erythrocyte surface antigen-1, alpha subun...    25   5.8  

>EAY07227.1 on AAX07978  alpha-6 giardin  (Others)  [Giardia duodenalis]
          Length = 255

 Score = 27.7 bits (60), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 1/71 (1%)

Query: 70  IMGNILDSQITEKEKYITIFLDSLLSYTCKIHVISGDEERLPICSYTNTQIDIIKEHVGI 129
           ++ + L S I  KE++  +F   +L        I GDE+RL + +      D I E +G 
Sbjct: 122 VLNDDLLSDIGTKEQWTKVFKHWILHKRSDRFDIDGDEKRL-VTAIGKKDYDTIAEMLGT 180

Query: 130 LTINQESKVFK 140
            ++++ + + +
Sbjct: 181 TSVSEYANIVR 191



>EAY07227.1 on Q4VPP5  Giardin subunit alpha-6  (Others)  [Giardia duodenalis]
          Length = 255

 Score = 27.7 bits (60), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 1/71 (1%)

Query: 70  IMGNILDSQITEKEKYITIFLDSLLSYTCKIHVISGDEERLPICSYTNTQIDIIKEHVGI 129
           ++ + L S I  KE++  +F   +L        I GDE+RL + +      D I E +G 
Sbjct: 122 VLNDDLLSDIGTKEQWTKVFKHWILHKRSDRFDIDGDEKRL-VTAIGKKDYDTIAEMLGT 180

Query: 130 LTINQESKVFK 140
            ++++ + + +
Sbjct: 181 TSVSEYANIVR 191



>EAY07227.1 on XP_001611897  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1369

 Score = 28.1 bits (61), Expect = 0.57,   Method: Composition-based stats.
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 114 SYTNTQIDIIKEHVGILTINQESK--VFKLYITDCA 147
           S+   Q D+ K++     INQ     +FKLYI  CA
Sbjct: 430 SFNTDQADVFKDNGTAQGINQHKNGAIFKLYILSCA 465



>EAY07227.1 on XP_001609540  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1349

 Score = 25.8 bits (55), Expect = 2.6,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 121 DIIKEHVGILTINQESKVFKLYITDCA 147
           D+ KE+   +  N+   +FKLYI  CA
Sbjct: 428 DVFKENGKDINKNKLGAIFKLYILSCA 454



>EAY07227.1 on XP_001609034  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1313

 Score = 25.0 bits (53), Expect = 5.8,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 126 HVGILTINQESKVFKLYITDCA 147
           H+G    N+   +FKLY+  CA
Sbjct: 415 HIGETNQNKIGAIFKLYVLSCA 436




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07231.1 Adaptin N terminal region family protein
[Trichomonas vaginalis G3]
         (705 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAX07971  alpha-16 giardin  (Others)  [Giardia duodenalis]             27   2.5  
XP_001350410  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   3.6  

>EAY07231.1 on AAX07971  alpha-16 giardin  (Others)  [Giardia duodenalis]
          Length = 255

 Score = 27.3 bits (59), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 2/68 (2%)

Query: 68  VSEFAPLVVQEVASPDPVGRQLAYVYLNQYADDALDSIVLAVNT--FQRSLTDSDPLMRA 125
           VS F+P   +E   P    R ++      Y  DA D+I+   +T   +R LT ++  M  
Sbjct: 46  VSSFSPGKEEEATQPLKTRRTVSEKMRKNYLSDAADTILSVEDTGVIRRDLTVTEARMLD 105

Query: 126 LAIKVMSS 133
           LA  V +S
Sbjct: 106 LATMVAAS 113



>EAY07231.1 on XP_001350410  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2178

 Score = 27.3 bits (59), Expect = 3.6,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 15/58 (25%)

Query: 649 DDGDDEN-EDGGNDGKKKDDAGDLNDFFGDEEKEYYSEIIEEEEEEVVEEADGEEDQE 705
           D G D+N ED  +DG++ DD   +++              EE E+  VE +  EE QE
Sbjct: 764 DTGTDDNLEDIDSDGEEDDDVSHVDE--------------EEPEDNPVEGSSEEEKQE 807




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07251.1 hypothetical protein TVAG_240520 [Trichomonas
vaginalis G3]
         (1120 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_844692  VSG  (Establishment)  [Trypanosoma brucei]                  28   3.3  
XP_820300   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   4.5  

>EAY07251.1 on XP_844692  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 482

 Score = 28.1 bits (61), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 11/34 (32%), Positives = 19/34 (55%)

Query: 364 LHIKSIADNCAKYYTKIINDYNNLVLDHPDSTKY 397
           L   + A+  A  YTK+IND   ++L+ P +  +
Sbjct: 90  LQAANCAETAATQYTKLINDAQEVMLNGPKTAGH 123



>EAY07251.1 on XP_820300   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 660

 Score = 27.7 bits (60), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 30/138 (21%), Positives = 61/138 (44%), Gaps = 14/138 (10%)

Query: 722 VATETSFNLNLFTKTTPFLL---FDISPNMNIQKKRQAKMRNFSGIRTSFVTNERPASPV 778
           V  E    + + +   P LL    D+      Q KR+ +   F+GI +  +T ++   P 
Sbjct: 80  VKDEEGGGVTVDSLGVPGLLKVGSDVFAVAEAQCKRKDENSGFNGIASQIITMDKDNEPK 139

Query: 779 KVVQNNQPVAWTVKMIREMFEYRKQHSQEFE-----YAGNKYYF--SKSSAENLFKDFAT 831
           +++++++      +++ E+   +++   +         GN  Y    K+S ENL +  AT
Sbjct: 140 ELLEDDKD----TQVLEEVTSGKEKMRVDVSRPTTVVEGNDIYMLVGKNSGENLAECKAT 195

Query: 832 SKTSKQNYRDLLRKITEG 849
           + T K     +  K+ EG
Sbjct: 196 TDTIKSGILLVKGKVGEG 213




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07274.1 DJ-1 family protein [Trichomonas vaginalis
G3]
         (187 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001610497  variant erythrocyte surface antigen-1, alpha subun...    24   6.3  

>EAY07274.1 on XP_001610497  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1315

 Score = 24.3 bits (51), Expect = 6.3,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 7/68 (10%)

Query: 7   LAATGFEPMELVNPTDLLRRAGADVKVAAVGTEGLQVDAAHGIKIVADVLFADVKNETYD 66
           L A GF       P ++L  AG   ++ A+  +GL+     G    + +  +DVK+E  +
Sbjct: 329 LQALGF-------PREMLNDAGPGNRLDAIIWDGLRDKLYLGFLEPSGLNTSDVKDENGN 381

Query: 67  LVVSPGGM 74
              SP GM
Sbjct: 382 TARSPFGM 389




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07275.1 hypothetical protein TVAG_240760 [Trichomonas
vaginalis G3]
         (351 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07276.1 hypothetical protein TVAG_240770 [Trichomonas
vaginalis G3]
         (232 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_802488   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.10 
XP_806556   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.3  
XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 26   2.2  
XP_001349032  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   6.1  
XP_821390   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   7.1  
XP_821991   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   7.5  
XP_817994   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   8.4  

>EAY07276.1 on XP_802488   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 485

 Score = 30.0 bits (66), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 7/69 (10%)

Query: 52  EYTVDGENLIQYVSTTPAKRTDVIELQAQLDKMLEERKARDKGICPVRSELYGQCFDEII 111
           ++T     L+++     +K  D  EL+ Q+   LEE  + DKG+C + +    Q   + +
Sbjct: 120 DFTGIASELLEWTDEQASKELDTTELKTQV---LEECSSGDKGVCSIAN----QAVSQGV 172

Query: 112 RQVTIDCPS 120
           + V +  P+
Sbjct: 173 KNVHVSRPT 181



>EAY07276.1 on XP_806556   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 844

 Score = 26.9 bits (58), Expect = 1.3,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 23/99 (23%)

Query: 7   PTLLKFDAPVAAGGQPKKTRQIPQAGETGSDALSRDVLDSILPPREYTVDGENLIQYVST 66
           P+L++ D  V A  +     Q P+ GE G                 +T     L+++   
Sbjct: 96  PSLVEMDGEVFAVAEA----QCPKEGEEGG----------------FTGIASELLEWTGE 135

Query: 67  TPAKRTDVIELQAQLDKMLEERKARDKGICPVRSELYGQ 105
              +  D  +L+ Q+   LEE  + DKG+C + ++   Q
Sbjct: 136 QEKEELDRTKLKTQV---LEECPSGDKGVCSIANQAVSQ 171



>EAY07276.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 26.2 bits (56), Expect = 2.2,   Method: Composition-based stats.
 Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 9/73 (12%)

Query: 161  KDEVEAENIKLLEEKKALELRSAELQAQIEAIEKREEDYRAQKEKEHADETAFLKRQTNQ 220
            ++ +E E  + L++++ L+ +  E   + EA+ KR+E  R QKE+E       LKRQ  +
Sbjct: 2758 QERLEREKQEQLQKEEELKRQEQERLQKEEAL-KRQEQERLQKEEE-------LKRQEQE 2809

Query: 221  -LKAQLEQMLQAK 232
             L+ + ++ LQ +
Sbjct: 2810 RLEREKQEQLQKE 2822




 Score = 25.8 bits (55), Expect = 3.0,   Method: Composition-based stats.
 Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 4/66 (6%)

Query: 165  EAENIKLLEEKKALELRSAELQAQIEAIEKREEDYRAQKEKEHADETAFLKRQTNQLKAQ 224
            E E ++  EE K  E    E + Q E ++K EE  R ++E+   +E   LKRQ  Q + Q
Sbjct: 2743 EQERLQKEEELKRQEQERLEREKQ-EQLQKEEELKRQEQERLQKEEA--LKRQ-EQERLQ 2798

Query: 225  LEQMLQ 230
             E+ L+
Sbjct: 2799 KEEELK 2804




 Score = 25.8 bits (55), Expect = 3.0,   Method: Composition-based stats.
 Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 4/66 (6%)

Query: 165  EAENIKLLEEKKALELRSAELQAQIEAIEKREEDYRAQKEKEHADETAFLKRQTNQLKAQ 224
            E E ++  EE K  E    E + Q E ++K EE  R ++E+   +E   LKRQ  Q + Q
Sbjct: 2793 EQERLQKEEELKRQEQERLEREKQ-EQLQKEEELKRQEQERLQKEEA--LKRQ-EQERLQ 2848

Query: 225  LEQMLQ 230
             E+ L+
Sbjct: 2849 KEEELK 2854




 Score = 25.8 bits (55), Expect = 3.1,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 42/71 (59%), Gaps = 3/71 (4%)

Query: 161  KDEVEAENIKLLEEKKALELRSAELQAQIEAIEKREEDYRAQKEK-EHADETAFLKRQTN 219
            ++E++ +  + L++++AL+ R  + + Q E   KR+E  R ++EK E   +   LKRQ  
Sbjct: 2772 EEELKRQEQERLQKEEALK-RQEQERLQKEEELKRQEQERLEREKQEQLQKEEELKRQ-E 2829

Query: 220  QLKAQLEQMLQ 230
            Q + Q E+ L+
Sbjct: 2830 QERLQKEEALK 2840




 Score = 24.6 bits (52), Expect = 6.7,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 173  EEKKALELRSAELQAQIEAIEKREEDYRAQKEKEHADETAFLKRQTNQLKAQLEQMLQ 230
            +E++ LE R  + Q Q E   KR+E  R QKE+    +     ++  +LK Q ++ L+
Sbjct: 2756 QEQERLE-REKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQERLE 2812



>EAY07276.1 on XP_001349032  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2267

 Score = 24.6 bits (52), Expect = 6.1,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 2/73 (2%)

Query: 42   DVLDSILPPREYTVDGENLIQYVST-TPAKRTDVIELQAQLDKMLEERKARDKGICPVRS 100
            D+ D IL  +E  + G N ++++ST + AK T+   ++ QL+ +  +   R + +C   S
Sbjct: 2042 DIYDEILKRKENELFGTNHVKHISTHSVAKLTNSDPIECQLN-LFHKWLDRHRDMCEKFS 2100

Query: 101  ELYGQCFDEIIRQ 113
                +  D++  Q
Sbjct: 2101 NNKEELLDKLKEQ 2113



>EAY07276.1 on XP_821390   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 940

 Score = 24.3 bits (51), Expect = 7.1,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 3   EEPKPTLLKFDAPVAAGGQPKKTRQ-IPQAGETGSDALSRDVLDS 46
           E  KP  L+ + P + GGQ +  ++ + ++ + GS  LS   + S
Sbjct: 741 EASKPATLETETPSSLGGQQQTEQELLKKSKDAGSGGLSTSAVSS 785



>EAY07276.1 on XP_821991   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 882

 Score = 24.3 bits (51), Expect = 7.5,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 1/49 (2%)

Query: 2   SEEPKPTLLKFDAPVAAG-GQPKKTRQIPQAGETGSDALSRDVLDSILP 49
           S +  PTL+        G G P+   +   +GE G      DVL+ I P
Sbjct: 785 SSDADPTLVTRSGDTMRGIGSPQNPEKSVSSGEDGETVGGTDVLEGIHP 833



>EAY07276.1 on XP_817994   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 954

 Score = 24.3 bits (51), Expect = 8.4,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)

Query: 3   EEPKPTLLKFDAPVAAGGQPKKTRQIPQAGE-TGSDALSRDVLDS 46
           E  KP  L+   P + GGQ +  +++ +  E  GS  LS   + S
Sbjct: 754 EASKPATLETGTPSSLGGQQQTEQELLRTSENAGSGGLSTSAVSS 798




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07287.1 Zn-dependent hydrolase of beta-lactamase,
putative [Trichomonas vaginalis G3]
         (341 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07301.1 hypothetical protein TVAG_223640 [Trichomonas
vaginalis G3]
         (1506 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_829785  VSG  (Establishment)  [Trypanosoma brucei]                  28   2.9  

>EAY07301.1 on XP_829785  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 484

 Score = 28.5 bits (62), Expect = 2.9,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 15/110 (13%)

Query: 906  LEGNPIDSKENEPKQKLDDEGNPIFDKEGNKVYDENEYLIPTFD------ENGKIILDED 959
            L G+   +++   K+K+      +F KE N +  +   L+ TF        +G   LD  
Sbjct: 319  LGGHEATAEQPNLKEKVKHTTEELFGKERNSIKTQITQLLNTFQPSKAAGSDGAKKLDSI 378

Query: 960  GNP-ILQKPPIYQDNDEYSEDDEPKKKHRRR--------KLKSPKKEEDE 1000
              P  L K   Y     + +++E KKK++          KL+ PKK  DE
Sbjct: 379  NAPEELSKAATYYTIKNFIDEEEQKKKNQENPSCPTKTGKLEEPKKSADE 428




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07306.1 Leucine Rich Repeat family protein
[Trichomonas vaginalis G3]
         (283 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001710242  CWP2  (Others)  [Giardia duodenalis]                     30   0.093
XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 28   0.74 
XP_001704890  CWP1  (Others)  [Giardia duodenalis]                     27   0.87 
XP_001608668  variant erythrocyte surface antigen-1, alpha subun...    27   1.3  
XP_001707641  CWP3  (Others)  [Giardia duodenalis]                     25   3.4  
XP_001350082  Rh2b  (Adhesin)  [Plasmodium falciparum]                 25   8.2  

>EAY07306.1 on XP_001710242  CWP2  (Others)  [Giardia duodenalis]
          Length = 255

 Score = 30.4 bits (67), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 14/32 (43%), Positives = 18/32 (56%)

Query: 4  IVLDKMGITSIEPDQLKLFPNLQVLYITNNKL 35
          I L  MG+T   P  +  FP L+ LY+ NN L
Sbjct: 66 IDLSDMGLTGALPADIGCFPLLRSLYLNNNDL 97



>EAY07306.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 28.1 bits (61), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 16/45 (35%), Positives = 30/45 (66%), Gaps = 4/45 (8%)

Query: 169  LRRADQIRAATQLRLQKEEE----ERQKIEREQKERFEAFANIKR 209
            L++ + ++   Q RLQKEEE    E++++ERE++E+ +    +KR
Sbjct: 2783 LQKEEALKRQEQERLQKEEELKRQEQERLEREKQEQLQKEEELKR 2827




 Score = 26.2 bits (56), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 4/59 (6%)

Query: 169  LRRADQIRAATQLRLQKEEE----ERQKIEREQKERFEAFANIKRAPLPDCVGFKREEV 223
            L++ + ++   Q RLQKEEE    E++++ER++ E  E   +IK     D V   ++E+
Sbjct: 2833 LQKEEALKRQEQERLQKEEELKRQEQERLERKKIELAEREQHIKSKLESDMVKIIKDEL 2891



>EAY07306.1 on XP_001704890  CWP1  (Others)  [Giardia duodenalis]
          Length = 241

 Score = 27.3 bits (59), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 11/30 (36%), Positives = 17/30 (56%)

Query: 6  LDKMGITSIEPDQLKLFPNLQVLYITNNKL 35
          L  MG+T   P+ +     L+ LY++NN L
Sbjct: 68 LSDMGLTGTIPENIGCLTYLKTLYLSNNSL 97



>EAY07306.1 on XP_001608668  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1337

 Score = 27.3 bits (59), Expect = 1.3,   Method: Composition-based stats.
 Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 14/102 (13%)

Query: 102 NEITQNKGYRQAIIEKFP-SLEILDGLEVTKAERKKITISRTLPNQKKPLSMLDFLKSLP 160
           N+I Q+K  R A+ + +  S     GL+  K   +  T+S +  N K    +L +L +LP
Sbjct: 437 NDIDQHK--RGALFKLYILSCAYFTGLQ--KKTSESATLSTSTNNPKTIREILYWLSALP 492

Query: 161 LSDADSRVLRRADQIRAATQLRLQK--EEEERQKIEREQKER 200
            S A  ++L+           RL+K  E  E ++++  Q +R
Sbjct: 493 YSQAYPKILKHGKH-------RLEKVLEHAEEKQLKFIQTDR 527



>EAY07306.1 on XP_001707641  CWP3  (Others)  [Giardia duodenalis]
          Length = 247

 Score = 25.4 bits (54), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 2/63 (3%)

Query: 61  DLRKQTFLNALYLANNKFESIENFLKQTANLRNLQILDLRGNEITQNKGYRQAIIEKFPS 120
           DL   T+L++LYL+ N  +  +  L     L  L++LD+    +  N       + K  S
Sbjct: 75  DLTNLTYLSSLYLSGNNLKDSD--LCLLGGLSYLRVLDMTDTSLDGNIPECICALSKLHS 132

Query: 121 LEI 123
           L +
Sbjct: 133 LHL 135



>EAY07306.1 on XP_001350082  Rh2b  (Adhesin)  [Plasmodium falciparum]
          Length = 1115

 Score = 24.6 bits (52), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 13/27 (48%), Positives = 21/27 (77%), Gaps = 4/27 (14%)

Query: 180 QLRLQKEEE----ERQKIEREQKERFE 202
           Q RLQKEEE    E++++ERE++E+ +
Sbjct: 604 QERLQKEEELKRQEQERLEREKQEQLQ 630




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07312.1 Beige/BEACH domain containing protein
[Trichomonas vaginalis G3]
         (2260 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001218755  VSG  (Establishment)  [Trypanosoma brucei]               32   0.41 
XP_829775  VSG  (Establishment)  [Trypanosoma brucei]                  32   0.43 
XP_827755  VSG  (Establishment)  [Trypanosoma brucei]                  30   1.1  
XP_001350954  RESA  (Others)  [Plasmodium falciparum]                  29   3.6  
XP_827748  VSG  (Establishment)  [Trypanosoma brucei]                  28   5.6  

>EAY07312.1 on XP_001218755  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 526

 Score = 32.0 bits (71), Expect = 0.41,   Method: Composition-based stats.
 Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 12/93 (12%)

Query: 484 NEIQKNQEEDKNNGDKDK-NEIEQKSKEENMINNEKKEENQEIKNDETKNINEDKQKNNE 542
           +   KN+E +K   DK+K NE+    KE+  + NE  E N++ + +ETK       KN  
Sbjct: 395 DSTDKNKECNKAKDDKEKCNEL----KEKGCVFNETGEANKKCQFNETK-----ASKNGV 445

Query: 543 ENHINNEKNDGNNESENVQTSRIREENQAENNN 575
              +   +  G+ E+  V   +  E+ + E  N
Sbjct: 446 P--VTQTQTAGSTEATAVNCGQHNEKTKCEEEN 476



>EAY07312.1 on XP_829775  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 503

 Score = 32.0 bits (71), Expect = 0.43,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 5/93 (5%)

Query: 502 NEIEQKSK-EENMINNEKKEENQEIKNDETKNINEDKQKNNEENHINNEKNDGNNESENV 560
           N+I+Q  +  ++  +  +KE+ Q    +E K   E +   N     +N KNDG     N 
Sbjct: 405 NQIKQTIEGNKDQCSTVEKEKKQSPSKEECKEHTEQEACQNAGCKFDNSKNDGEKCFPNP 464

Query: 561 QTSRI--REENQAENNNSEAKDDLINDIKTISL 591
           +T     ++ N ++N N+   +  +  IK + L
Sbjct: 465 ETKEAAQKDGNDSKNTNTTGSNSFV--IKKVPL 495



>EAY07312.1 on XP_827755  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 510

 Score = 30.4 bits (67), Expect = 1.1,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 3/84 (3%)

Query: 453 FDLLILNDIKKLRDENYNNSKYIIDLTKDKNNEIQKNQEEDKNNGDKDKNEIEQKSKEEN 512
           F  L+  +   +RD+    SK I +LT       + NQ      G + K E+E + K   
Sbjct: 383 FKSLLEGESTPIRDKGEVESKKITELTSSTE---KTNQAVSLMEGIRIKRELEAEKKNIP 439

Query: 513 MINNEKKEENQEIKNDETKNINED 536
              + KK E  + + DETK  N+D
Sbjct: 440 KAIDTKKPEECKGEKDETKCNNKD 463



>EAY07312.1 on XP_001350954  RESA  (Others)  [Plasmodium falciparum]
          Length = 654

 Score = 28.9 bits (63), Expect = 3.6,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 35/83 (42%), Gaps = 4/83 (4%)

Query: 482 KNNEIQKNQEEDKNNGDKDKNEIEQKSKEENMINNEKKEENQEIKNDETKNINEDKQKNN 541
           K NE  KN+E+  NN   D ++  +K + E         EN+++ +    N + +     
Sbjct: 453 KTNEENKNKEK-TNNSKSDGSKAHEKKENE---TKNTAGENKKVDSTSADNKSTNAATPG 508

Query: 542 EENHINNEKNDGNNESENVQTSR 564
            ++     K D    S N  T++
Sbjct: 509 AKDKTQGGKTDKTGASTNAATNK 531



>EAY07312.1 on XP_827748  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 550

 Score = 28.5 bits (62), Expect = 5.6,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 44/96 (45%)

Query: 480 KDKNNEIQKNQEEDKNNGDKDKNEIEQKSKEENMINNEKKEENQEIKNDETKNINEDKQK 539
           K++N +++ ++ +++ + +  KN+I   S  E    N   + + E K D TK    +  K
Sbjct: 405 KNENTKLKTSKSDEQKDDESTKNQIHCNSIAEVEKCNADPKCSYETKTDGTKKCKFNSTK 464

Query: 540 NNEENHINNEKNDGNNESENVQTSRIREENQAENNN 575
             E+     +   G    + V+ S  ++++  E  N
Sbjct: 465 AKEKGIPVTQTQTGGTTGDGVKCSDHKDQSTCEKAN 500




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07313.1 DnaJ domain containing protein [Trichomonas
vaginalis G3]
         (394 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001348165  RESA  (Others)  [plasmodium falciparum]                  41   9e-05
XP_001609101  variant erythrocyte surface antigen-1, alpha subun...    28   0.86 
XP_001350798  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   2.2  
XP_001350413  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   9.3  

>EAY07313.1 on XP_001348165  RESA  (Others)  [plasmodium falciparum]
          Length = 1085

 Score = 41.2 bits (95), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 13  YDIIGVPPTATQDEIKHAYRKKAMQLHPDRNQDDPNATEKFQQLSEAYEILKDPAKRERY 72
           YDI+GV   A  +EI   Y K A   +P   +        F++++EAY++L D  K+  Y
Sbjct: 525 YDILGVGVNADMNEITERYFKLAENYYP-YQRSGSTVFHNFRKVNEAYQVLGDIDKKRWY 583

Query: 73  DKFG 76
           +K+G
Sbjct: 584 NKYG 587



>EAY07313.1 on XP_001609101  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1359

 Score = 28.5 bits (62), Expect = 0.86,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 3/56 (5%)

Query: 341 VRNIFNRLVGAKQKLEDAPQEK---QEEFEKLLRQQQEEFEELLRQYEQQEAAKKQ 393
           +  + + ++G  +KL +  +EK    EE +K L   +E+ EE  +  E  EAAK +
Sbjct: 715 LEKVLDVVLGVVEKLVEGVKEKVKALEEIKKTLEAAKEKLEEAKKTQEALEAAKGE 770



>EAY07313.1 on XP_001350798  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2359

 Score = 26.9 bits (58), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 12/92 (13%)

Query: 201  HKLINSKKEITIDIEPGIPNEEKIILENMGDEYPGKISADLILIISQKCPKKFVRDGDDL 260
            +K +N+   I I ++   P  E     NM D YP   S D IL   +K  + +    DD+
Sbjct: 2257 NKTLNTDVSIHIHMDDPKPTNE---FSNM-DTYPNNSSMDNILDDLEKYNEPYYDVQDDI 2312

Query: 261  YY---THTCSIVEQKFGTAFTIDTPDGRELQV 289
            YY    H  S V+        +D P   +L++
Sbjct: 2313 YYDVNDHDASTVDSN-----NMDVPSKVKLEM 2339



>EAY07313.1 on XP_001350413  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2860

 Score = 25.0 bits (53), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 11/38 (28%), Positives = 23/38 (60%)

Query: 350 GAKQKLEDAPQEKQEEFEKLLRQQQEEFEELLRQYEQQ 387
           G K + ++  +   + FEK ++++Q E+  +  QYE+Q
Sbjct: 608 GTKWRCKNKCKNNCKCFEKWVKKKQVEWNTMKEQYEKQ 645




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07317.1 CAMK family protein kinase [Trichomonas
vaginalis G3]
         (389 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    56   8e-10
XP_845069  VSG  (Establishment)  [Trypanosoma brucei]                  27   1.7  
XP_650534  HgI  (Adhesin)  [Entamoeba histolytica]                     27   3.1  
XP_809607   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   5.6  

>EAY07317.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 56.2 bits (134), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 28/214 (13%)

Query: 5   VTDNYDPKFKIGDGGFSQVFFALHRKT---CARVAIKMISKRDHNEDGKQLDRINREISI 61
           V D+Y+   KIG G FS+VF  L+  T   C    +K + K+    + K L  +    +I
Sbjct: 51  VPDSYEIVRKIGRGKFSEVFEGLNTVTKDKCVIKILKPVKKKKIKREIKILQNLRGGPNI 110

Query: 62  LKSVKHPFISELFDVIE--TSENTYLIMEYIQNG---TLLNSINENGPYNEEEAATIFAQ 116
           +K         L D+++   S    LI E++ N    TL  ++        ++      Q
Sbjct: 111 IK---------LLDIVKDPQSRTPSLIFEHVNNTDFKTLYPTL------TIQDIKYYIYQ 155

Query: 117 LNLVLQYLQTNCKVAHRDIKAENIMFDAHHNI-RLIDFGLS--IQEKSIMNTQCGSPSYA 173
           L   + Y  +   + HRDIK  N+M D    I RLID+GL+     +   + +  +  Y 
Sbjct: 156 LLKAMNYCHSQG-IMHRDIKPHNVMIDHEKKILRLIDWGLAEFYHPEQEYSVRVATRYYK 214

Query: 174 SPEMILG-KPYGYASDIWSCGVLLFIMVVGHLPF 206
            PE+++  + Y Y+ DIWS G +L  ++    PF
Sbjct: 215 GPELLVDMRYYDYSLDIWSIGCMLAGIIFKKEPF 248



>EAY07317.1 on XP_845069  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 477

 Score = 27.3 bits (59), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 9/28 (32%), Positives = 18/28 (64%)

Query: 361 KSLPNGTPNINVNTVFIRRKMPSVLVRN 388
           K LPNG  +I+    F++R+ P  ++++
Sbjct: 264 KQLPNGLDSIDALNAFLKREEPDAMMKD 291



>EAY07317.1 on XP_650534  HgI  (Adhesin)  [Entamoeba histolytica]
          Length = 1207

 Score = 26.6 bits (57), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 7/52 (13%)

Query: 247  ERITLEGVINHKWV-----HDKVLYVQDKIKNFQYDDKYIFDKMLNIKSTDV 293
            E IT EGVI HKW      H+K L  ++K ++  Y DK   +   N    D+
Sbjct: 1023 ETIT-EGVITHKWTSNIDGHEKALLYKNKCQD-AYCDKETGEIETNFVQCDI 1072



>EAY07317.1 on XP_809607   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 920

 Score = 25.8 bits (55), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 14/75 (18%)

Query: 52  LDRI--NREISILKSVKHPFISELFDVIETSENTYLIMEYI------QNGTLLNSINEN- 102
           L R+  N+    +KSV+  FI+   D +E + N  L+   +      + G L   + +N 
Sbjct: 340 LSRVWGNKHKGNVKSVRSGFITATIDGVEDNRNVMLVTLPVYAEKGNEKGKLHLWLTDNT 399

Query: 103 -----GPYNEEEAAT 112
                GP +++EAAT
Sbjct: 400 HIVDIGPVSDDEAAT 414




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07319.1 hypothetical protein TVAG_139490 [Trichomonas
vaginalis G3]
         (1645 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_828094  VSG  (Establishment)  [Trypanosoma brucei]                  30   1.5  
XP_966307  PfEMP1  (Establishment)  [Plasmodium falciparum]            28   4.2  
XP_001349434  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   7.1  
XP_827742  VSG  (Establishment)  [Trypanosoma brucei]                  27   8.0  

>EAY07319.1 on XP_828094  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 483

 Score = 29.6 bits (65), Expect = 1.5,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 8/112 (7%)

Query: 683 ETAKEVKKSDQKEDVEMTDEEKAMMLAEMSNLTENLDNP---QQKPPINNQISNNQTVTH 739
           ET +E++K+ QK   E   +E  M++A           P   Q   P  +  S  QT   
Sbjct: 354 ETMEEMEKNAQKAREEA--KEIRMLIAAAKRAYRTAIEPSMKQSNEPAKS--SEGQTKMQ 409

Query: 740 QPTEEEDK-NEEDQTDDAQNNAQTPQKVHKKKKIIKKKRHRQSSEMETAEET 790
           QP+E ED  N++ Q +        P+   KK K+ K++  + + E+    +T
Sbjct: 410 QPSETEDSCNKKGQNECNSPCKWNPEAEGKKCKLDKEEVKKIADEVAKDAKT 461



>EAY07319.1 on XP_966307  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2238

 Score = 28.5 bits (62), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 35/88 (39%), Gaps = 11/88 (12%)

Query: 1135 DSKIVLNEKGEKGIYDQNGNFVLLNGPKHKPGDIGFYDVKGNFTKMPEGKLVAGNDGEMG 1194
            + KI  NEK E   +        L G K K G     D   N    P GK+ AG+ G  G
Sbjct: 1354 EGKIEFNEKSETFQHTDYCGTCSLIGVKCKKGHC---DNAANGKDCPTGKITAGSFGNEG 1410

Query: 1195 FLDDQGNFVKIPQGGLQVGKNGEMGYFD 1222
              D  GN        + V  NGE G+ D
Sbjct: 1411 --DSIGNV------DMHVSDNGEKGFGD 1430



>EAY07319.1 on XP_001349434  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2109

 Score = 27.7 bits (60), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 5/49 (10%)

Query: 1213 GKNGEMGYFDDTGKFVKLRTNSQRKGIVDKDGN-----FVPFLAISDNQ 1256
            GKNGE  Y D  G   K   ++++K   D D N      +PF    DNQ
Sbjct: 335  GKNGEDKYCDLNGYDCKRTISAEKKLFPDSDCNKCSYSCIPFRTWIDNQ 383



>EAY07319.1 on XP_827742  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 505

 Score = 27.3 bits (59), Expect = 8.0,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 45/119 (37%), Gaps = 16/119 (13%)

Query: 844 SEDTLSETMSETEDSVASNSILGTIEEEKENYFWKEGEVKNNSNTKSDKNEVNSESEISQ 903
           + D +S+ +    D+ + +  L T+  +             NS    DK    S   I+ 
Sbjct: 356 TSDEVSKLLFNKGDTASVSDFLTTLNSD------------TNSIADGDKPITGSTQSIAA 403

Query: 904 NNDSNTTQTKSRRKSKKSPTKSSKSSK----SKKNQKIKKEKKKKVTKKVKKINKDGVE 958
             +     T     + K  TK+S S K    +KKN   KKE+KK    K    +  G E
Sbjct: 404 GANFRKAMTYFYAMNLKKSTKASGSEKPEGDAKKNAADKKEEKKDGDNKTTAADFTGTE 462




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07324.1 TKL family protein kinase [Trichomonas
vaginalis G3]
         (797 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    56   3e-09
XP_001349219  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   8.8  

>EAY07324.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 56.2 bits (134), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 54/95 (56%), Gaps = 1/95 (1%)

Query: 309 FDIARGMQELHSKHIIHRDLKSLNVLLDKDYHV-HICDFGFSRGAGEEQLYTQNVGTPHW 367
           + + + M   HS+ I+HRD+K  NV++D +  +  + D+G +     EQ Y+  V T ++
Sbjct: 154 YQLLKAMNYCHSQGIMHRDIKPHNVMIDHEKKILRLIDWGLAEFYHPEQEYSVRVATRYY 213

Query: 368 MAPELLDSSHSYNYKVDVYAYGIVLWEIMTCQLPY 402
             PELL     Y+Y +D+++ G +L  I+  + P+
Sbjct: 214 KGPELLVDMRYYDYSLDIWSIGCMLAGIIFKKEPF 248



>EAY07324.1 on XP_001349219  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2595

 Score = 26.2 bits (56), Expect = 8.8,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 28/74 (37%), Gaps = 1/74 (1%)

Query: 85   CWSHTTLENPCNSVATTLCQLTSRLQKLALKLHENSSKAFEIDSPQWMQYH-ILDLRGIA 143
            C  H T+EN C           S  Q + L L     K ++ D     + H  L ++   
Sbjct: 1937 CTKHKTIENRCQKACKKYSNFISTNQNVYLLLKSQYDKNYKRDKTGGREAHDYLKIKCKN 1996

Query: 144  ASFNQYIQNCAEDD 157
               +  +QN  +DD
Sbjct: 1997 GKCDCIVQNFIDDD 2010




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07325.1 hypothetical protein TVAG_139550 [Trichomonas
vaginalis G3]
         (187 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07329.1 hypothetical protein TVAG_139590 [Trichomonas
vaginalis G3]
         (225 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]                 26   2.0  
XP_818394   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   8.1  
XP_818344   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   8.5  

>EAY07329.1 on XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]
          Length = 2112

 Score = 26.2 bits (56), Expect = 2.0,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 12/56 (21%)

Query: 79  RPFQNGAQIDNANAEENQNEIQNVFRQFTPEEKRLICINSHLSPIQKLSIVQNINP 134
           +P +N   ++  N EEN N ++    + TPEE        + +P++K +  +N NP
Sbjct: 501 KPEENPEPVEKPNPEENPNPVE----KPTPEE--------NPNPVEKPTPEENPNP 544



>EAY07329.1 on XP_818394   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1059

 Score = 24.3 bits (51), Expect = 8.1,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 27/54 (50%)

Query: 88   DNANAEENQNEIQNVFRQFTPEEKRLICINSHLSPIQKLSIVQNINPNHTLSSV 141
            +N N    +++I +     TP +  ++  + HL  +  +S++ +I  +  LS V
Sbjct: 991  ENTNTTPGESKIPSESNATTPSDTDILLEHGHLGELAAISLIGDITVHGCLSRV 1044



>EAY07329.1 on XP_818344   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 928

 Score = 24.3 bits (51), Expect = 8.5,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 21/45 (46%)

Query: 9   QRLEKINEARRLNKLLREKKLVRIQEINTLLDVYNPSKANSQSQG 53
           Q LEK N   R   + R   +V+  +I  L+  YN + A   S G
Sbjct: 151 QFLEKSNSPNRKVDVSRPTTIVKGNDIYMLVGKYNRNDAQGSSGG 195




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07331.1 hypothetical protein TVAG_139610 [Trichomonas
vaginalis G3]
         (295 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_817001   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.4  
XP_814755   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   2.5  
XP_818308   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   5.9  
XP_818312   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   6.1  
XP_818232   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   6.6  
XP_814492   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   9.7  

>EAY07331.1 on XP_817001   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 928

 Score = 26.6 bits (57), Expect = 2.4,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 130 NGVEGWDTTHLVAVTISTKTQGEMKLYTYQSIEN 163
           N +EG + TH VA+ +   TQG   +   + +EN
Sbjct: 636 NHIEGQEKTHQVAILLQNSTQGSAYVDGRRVLEN 669



>EAY07331.1 on XP_814755   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 934

 Score = 26.2 bits (56), Expect = 2.5,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 130 NGVEGWDTTHLVAVTISTKTQGEMKLYTYQSIEN 163
           N +EG + TH VA+ +   TQG   +   + +EN
Sbjct: 640 NHIEGQEKTHQVAIVLQNGTQGSAYVDGRRVLEN 673



>EAY07331.1 on XP_818308   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 925

 Score = 25.0 bits (53), Expect = 5.9,   Method: Composition-based stats.
 Identities = 10/22 (45%), Positives = 14/22 (63%)

Query: 130 NGVEGWDTTHLVAVTISTKTQG 151
           N +EG + TH VA+ +   TQG
Sbjct: 632 NHIEGQEKTHQVAIVLQNGTQG 653



>EAY07331.1 on XP_818312   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 928

 Score = 25.0 bits (53), Expect = 6.1,   Method: Composition-based stats.
 Identities = 10/22 (45%), Positives = 14/22 (63%)

Query: 130 NGVEGWDTTHLVAVTISTKTQG 151
           N +EG + TH VA+ +  K QG
Sbjct: 635 NHIEGQEKTHQVAILLQNKKQG 656



>EAY07331.1 on XP_818232   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 933

 Score = 25.0 bits (53), Expect = 6.6,   Method: Composition-based stats.
 Identities = 10/22 (45%), Positives = 14/22 (63%)

Query: 130 NGVEGWDTTHLVAVTISTKTQG 151
           N +EG + TH VA+ +   TQG
Sbjct: 641 NRIEGQEKTHQVAIVLQNGTQG 662



>EAY07331.1 on XP_814492   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 923

 Score = 24.6 bits (52), Expect = 9.7,   Method: Composition-based stats.
 Identities = 10/22 (45%), Positives = 14/22 (63%)

Query: 130 NGVEGWDTTHLVAVTISTKTQG 151
           N +EG + TH VA+ +   TQG
Sbjct: 634 NRIEGKEKTHQVAIVLRNGTQG 655




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07333.1 hypothetical protein TVAG_139630 [Trichomonas
vaginalis G3]
         (357 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_810288   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   6.1  

>EAY07333.1 on XP_810288   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 874

 Score = 25.4 bits (54), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%)

Query: 286 NQPIHYSGYQFT--DTVMLNGGDPEIPKP 312
           NQP H++ Y FT   TV ++G   E P P
Sbjct: 566 NQPYHFANYNFTLVATVSIDGEPQEGPIP 594




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07334.1 hypothetical protein TVAG_139640 [Trichomonas
vaginalis G3]
         (106 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_805943   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   0.89 
XP_001350413  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   3.2  
AAZ38164  RON3  (Invasion)  [Toxoplasma gondii]                        23   4.9  
XP_802208   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   6.0  
XP_001349031  PfEMP1  (Establishment)  [Plasmodium falciparum]         22   8.0  

>EAY07334.1 on XP_805943   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 983

 Score = 25.4 bits (54), Expect = 0.89,   Method: Composition-based stats.
 Identities = 8/25 (32%), Positives = 20/25 (80%)

Query: 26  KQTTTNTIIAITNSELKITDEETPE 50
           KQT+++ I+  T+++++  +EE+P+
Sbjct: 764 KQTSSDVIVPPTSADMEKVEEESPD 788



>EAY07334.1 on XP_001350413  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2860

 Score = 23.9 bits (50), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)

Query: 23   DNLK--QTTTNTIIAITNSELKITDEETPEK 51
            DN K   TT N I+++TN E + T E   EK
Sbjct: 1380 DNTKDISTTVNRILSVTNGETQTTAENWWEK 1410



>EAY07334.1 on AAZ38164  RON3  (Invasion)  [Toxoplasma gondii]
          Length = 255

 Score = 23.1 bits (48), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 9/18 (50%), Positives = 12/18 (66%)

Query: 7   EKNQFNTQMNELVHAFDN 24
            +N F T  N +VHAF+N
Sbjct: 221 RQNPFATVKNVVVHAFEN 238



>EAY07334.1 on XP_802208   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 410

 Score = 22.7 bits (47), Expect = 6.0,   Method: Composition-based stats.
 Identities = 9/15 (60%), Positives = 11/15 (73%)

Query: 92  DFSEFNSIADQLMTL 106
           D S FN IA +L+TL
Sbjct: 96  DMSRFNGIASELLTL 110



>EAY07334.1 on XP_001349031  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2275

 Score = 22.3 bits (46), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 10/25 (40%), Positives = 15/25 (60%)

Query: 16   NELVHAFDNLKQTTTNTIIAITNSE 40
            NEL   +   K T+TN++   TNS+
Sbjct: 2086 NELFGTYHTKKNTSTNSVAKNTNSD 2110




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07335.1 hypothetical protein TVAG_139650 [Trichomonas
vaginalis G3]
         (684 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_806381   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           34   0.023
XP_813123   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           32   0.099
XP_803245   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           31   0.12 
XP_818394   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           31   0.33 
XP_811703   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.42 
XP_815479   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   0.93 
XP_806299   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   0.96 
XP_815749   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   1.5  
XP_808201   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   1.7  
XP_804625   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   1.9  
XP_813616   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   2.1  
XP_812615   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   4.6  
XP_807986   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   5.4  

>EAY07335.1 on XP_806381   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1045

 Score = 34.3 bits (77), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 13/124 (10%)

Query: 13   ENNNPPAQETQSQTENQQAAKESNNSNSEKKNSPN----PEKTSSRKRSSKDKKNSFQSE 68
            EN++  +  T +    +  + E+ + NSE+  S +    P K  +  RS++D  N  ++E
Sbjct: 897  ENDDVRSTGTGTTGAEESLSPEAGDGNSERTMSSDSSLTPSKIDAEPRSAEDTDNISRTE 956

Query: 69   GNESNEATQEMEEKPKKETTETTNQPSKPETQTKTRKESSANTETTQLNSQMKSILSNHE 128
            G E   ++++ EE P+   T   N  + P  +TK   ES+A T +         IL  H 
Sbjct: 957  GAEF--SSEDGEEAPQTVDTAPGNTNTAP-GETKIPSESNATTPSD------TGILLEHG 1007

Query: 129  NLGK 132
            +LG+
Sbjct: 1008 HLGE 1011



>EAY07335.1 on XP_813123   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1048

 Score = 32.3 bits (72), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 65/132 (49%), Gaps = 16/132 (12%)

Query: 5    SEPEANNNENNNPPAQETQSQTENQQAAKESNNSNSEK----KNSPNPEKTSSRKRSSKD 60
            +EP A   EN++  +  T +    +  + E+ + NSE+     +SP P KT     S++D
Sbjct: 895  TEPSA---ENDDVRSTGTVTTGAEESFSLETGDRNSERTMGSDSSPTPSKTDVEPTSAED 951

Query: 61   KKNSFQSEGNESNEATQEMEEKPKKETTETTNQPSKPETQTKTRKESSANTETTQLNSQM 120
              N  +++G E   ++++ +E P+   T   N+ + P  +TK   ES+A T +       
Sbjct: 952  TDNISRTDGAEV--SSEDGKEVPRTVDTAPENKNTTP-GETKIPSESNATTPSD------ 1002

Query: 121  KSILSNHENLGK 132
              +L  H +LG+
Sbjct: 1003 TDVLLEHGHLGE 1014



>EAY07335.1 on XP_803245   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 194

 Score = 31.2 bits (69), Expect = 0.12,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 7/103 (6%)

Query: 13  ENNNPPAQETQSQTENQQAAKESNNSNSEKKNSPN----PEKTSSRKRSSKDKKNSFQSE 68
           ENN   +  T++    +    E+  S+SE+  S +    P K+ +   S++D  +  + E
Sbjct: 46  ENNGVQSTGTRTTGAEESLILEAGGSDSERTMSSDSSLTPSKSDAETTSAEDTDDISRIE 105

Query: 69  GNESNEATQEMEEKPKKETTETTNQPSKPETQTKTRKESSANT 111
           G E   + ++ +E P+   T   N  + P  +TK   ES+A T
Sbjct: 106 GAEF--SFEDGKEVPRTVETAPENTNTTP-GETKIPSESNATT 145



>EAY07335.1 on XP_818394   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1059

 Score = 30.8 bits (68), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 16/132 (12%)

Query: 5    SEPEANNNENNNPPAQETQSQTENQQAAKESNNSNSEK----KNSPNPEKTSSRKRSSKD 60
            +EP A   EN++  +  T +    +  + E+ + NSE+     +SP P K+ +   S++D
Sbjct: 906  TEPSA---ENDDVRSTGTVTTGAEESFSLETGDRNSERTMGSDSSPTPSKSDAEPTSAED 962

Query: 61   KKNSFQSEGNESNEATQEMEEKPKKETTETTNQPSKPETQTKTRKESSANTETTQLNSQM 120
              N  +++G E   ++++ +E P+   T        PE    T  ES   +E+       
Sbjct: 963  TDNISRTDGAEV--SSEDGKEVPRTVDT-------APENTNTTPGESKIPSESNATTPSD 1013

Query: 121  KSILSNHENLGK 132
              IL  H +LG+
Sbjct: 1014 TDILLEHGHLGE 1025



>EAY07335.1 on XP_811703   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1043

 Score = 30.4 bits (67), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 10/115 (8%)

Query: 1   MKPSSEPEANNNENNNPPAQETQSQTENQQAAKESNNSNSEKKNSPN----PEKTSSRKR 56
           ++ S+EP   + EN++  +  T +    +  + E+   NSE   S +    P K+ +  R
Sbjct: 886 VQQSTEP---STENDDVRSTGTGTTGAEESLSLEAGGRNSEGTMSSDSSLTPSKSDAEPR 942

Query: 57  SSKDKKNSFQSEGNESNEATQEMEEKPKKETTETTNQPSKPETQTKTRKESSANT 111
           S++D  N   +EG E   + ++ +E P+   T   N  + P  +TK   ES+A T
Sbjct: 943 SAEDTDNISWTEGAEF--SVEDGKEVPQTVDTAPGNTSTTP-GETKIPSESNATT 994



>EAY07335.1 on XP_815479   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1047

 Score = 29.3 bits (64), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 10/111 (9%)

Query: 5   SEPEANNNENNNPPAQETQSQTENQQAAKESNNSNSEKK----NSPNPEKTSSRKRSSKD 60
           +EP A   EN++  +  T +    +  + E+ + NSE+      S  P K+ +   S++D
Sbjct: 894 TEPSA---ENDDVRSTGTVTTGAEESFSLEAGDGNSERTMNSDGSLTPSKSDAEPTSAED 950

Query: 61  KKNSFQSEGNESNEATQEMEEKPKKETTETTNQPSKPETQTKTRKESSANT 111
             N  ++EG ES  ++++++E P+   T   N  + P  +T    ES+A T
Sbjct: 951 TDNISRTEGEES--SSEDVKEVPQTVDTAPGNTNTTP-GETMIPSESNATT 998



>EAY07335.1 on XP_806299   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1047

 Score = 29.3 bits (64), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 20/76 (26%), Positives = 42/76 (55%), Gaps = 6/76 (7%)

Query: 13  ENNNPPAQETQSQTENQQAAKESNNSNSEK----KNSPNPEKTSSRKRSSKDKKNSFQSE 68
           EN++  +  T +    Q  + E+ + +SE+     +SP P K+ +  +S+++  N   SE
Sbjct: 902 ENDDVRSTGTGTTGAEQSLSLEAGDGSSERTMGSGSSPTPSKSGAETKSAENTDNISWSE 961

Query: 69  GNESNEATQEMEEKPK 84
           G E   +++++EE P+
Sbjct: 962 GGEF--SSEDVEEVPQ 975



>EAY07335.1 on XP_815749   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1053

 Score = 28.5 bits (62), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 9/87 (10%)

Query: 11  NNENNNPPAQETQSQTENQQAAKESNNSNSEK----KNSPNPEKTSSRKRSSKDKKNSFQ 66
           +NENN+  +  T +    Q  + E+ + NSE+     +S  P ++ +   S+ +  + F+
Sbjct: 904 SNENNDVRSTGTGNTGAEQSLSLEAGDGNSERTMGSDSSLTPSESDAETTSAGNTDDVFR 963

Query: 67  SEGNE-----SNEATQEMEEKPKKETT 88
           ++G E      NE  Q +E  P    T
Sbjct: 964 TKGAEVSSENGNEVPQTVETAPGNTNT 990



>EAY07335.1 on XP_808201   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1044

 Score = 28.5 bits (62), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 10/101 (9%)

Query: 13  ENNNPPAQETQSQTENQQAAKESNNSNSEK----KNSPNPEKTSSRKRSSKDKKNSFQSE 68
           ENN+  +  T +    +    E+ + NSE+     +SP P K+ +   S+++  + F++E
Sbjct: 898 ENNDVRSTGTGNTGAEESLILEARDGNSERTMGSGSSPTPSKSDAEPSSAENTDDVFRTE 957

Query: 69  GNE-----SNEATQEMEEKPKKETTETTNQPSKPETQTKTR 104
           G E       E  Q ++  P   T  T      P T+   R
Sbjct: 958 GTEFPVENGKEVPQTVDTAPGN-TNTTPGGEGIPSTKGAAR 997



>EAY07335.1 on XP_804625   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1042

 Score = 28.1 bits (61), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 25/103 (24%), Positives = 51/103 (49%), Gaps = 7/103 (6%)

Query: 12  NENNNPPAQETQSQTENQQAAKESNNSNSEKKNSPN----PEKTSSRKRSSKDKKNSFQS 67
           +ENN+  +  T +    Q  + E+ + NSE+  S +    P K+ +   S+++  +  ++
Sbjct: 893 SENNDVRSTGTGTTGAEQSFSLEARDGNSERTMSSDSSLTPSKSGAETTSAENTDDVSRT 952

Query: 68  EGNESNEATQEMEEKPKKETTETTNQPSKP-ETQTKTRKESSA 109
           EG E     +  EE P+   T + N  + P ET+  ++  ++A
Sbjct: 953 EGTEF--PVENGEEVPQTVDTASGNASTLPGETEISSKSNATA 993



>EAY07335.1 on XP_813616   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1038

 Score = 28.1 bits (61), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 23/90 (25%), Positives = 47/90 (52%), Gaps = 6/90 (6%)

Query: 13  ENNNPPAQETQSQTENQQAAKESNNSNSEKKNSPNPEKTSSRK----RSSKDKKNSFQSE 68
           ENN+  +  T +    Q  + E  + NSE+  + +   TSS+      S+++  + F++E
Sbjct: 891 ENNDVRSTGTGTTGAEQSLSLEVGDRNSERTMNSDSTLTSSKSDAEPTSAENTDDVFRTE 950

Query: 69  GNESNEATQEMEEKPKKETTETTNQPSKPE 98
           G E   ++++ +E P+   T++ N  + PE
Sbjct: 951 GAEV--SSEDGKEVPQTVDTKSGNTSTAPE 978



>EAY07335.1 on XP_812615   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1116

 Score = 26.9 bits (58), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 50/101 (49%), Gaps = 9/101 (8%)

Query: 1    MKPSSEPEANNNENNNPPAQETQSQTENQQAAKESNNSNSEK----KNSPNPEKTSSRKR 56
            ++ S EP A   ENN+  +  T +    +  + E+ + +SE+     +S  P K+ +   
Sbjct: 959  VQQSVEPSA---ENNDVRSTGTGTTGAEESLSLEARDGSSERTMNSGSSITPSKSDAEPT 1015

Query: 57   SSKDKKNSFQSEGNESNEATQEMEEKPKKETTETTNQPSKP 97
            S++D  N  ++EG E   ++++ +E P+   T   N  + P
Sbjct: 1016 SAEDTDNISRTEGTEV--SSEDGKEAPQTVDTAPGNTNTAP 1054



>EAY07335.1 on XP_807986   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1054

 Score = 26.6 bits (57), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 30/125 (24%), Positives = 63/125 (50%), Gaps = 15/125 (12%)

Query: 13   ENNNPPAQETQSQTENQQAAKESNNSNSEK----KNSPNPEKTSSRKRSSKDKKNSFQSE 68
            EN N  +  T++    Q  + E+ + +SE+     +S  P KT +   S+++  +  ++E
Sbjct: 906  ENKNVQSTGTRTTGMEQSFSLEARDRSSERTMNSDSSLTPSKTDAETTSAENTDDISRTE 965

Query: 69   GNESNEATQEMEEKPKKETTETTNQPSKP-ETQTKTRKESSANTETTQLNSQMKSILSNH 127
            G ES  ++++++E P+   T + N  + P ET+  +   ++  ++T         IL  H
Sbjct: 966  GEES--SSEDVKEVPQTVDTASGNTNTTPGETKIPSGSNATIPSDT--------GILLEH 1015

Query: 128  ENLGK 132
             +LG+
Sbjct: 1016 AHLGE 1020




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07353.1 hypothetical protein TVAG_139830 [Trichomonas
vaginalis G3]
         (126 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351319  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   2.5  

>EAY07353.1 on XP_001351319  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2646

 Score = 24.6 bits (52), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 8/41 (19%)

Query: 63  ESLACEARQLDLIDYFKKFCWGFTDKIDIPLVNNNELQVTP 103
           E L  + R+ D++  +KKFC G           N E   TP
Sbjct: 553 EILTGDTRKSDMVQKYKKFCNGNG--------GNGEKSATP 585




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07355.1 hypothetical protein TVAG_139850 [Trichomonas
vaginalis G3]
         (136 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAY44837  MSA-1  (Invasion)  [Babesia bovis]                           25   1.1  

>EAY07355.1 on AAY44837  MSA-1  (Invasion)  [Babesia bovis]
          Length = 318

 Score = 25.4 bits (54), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 12/22 (54%), Positives = 13/22 (59%)

Query: 101 DTQFPFHEPSLFDDNNKIYQEV 122
           DT  P  E SL+DD NK Y  V
Sbjct: 37  DTSSPLPEGSLYDDMNKFYGAV 58




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07361.1 hypothetical protein TVAG_204670 [Trichomonas
vaginalis G3]
         (79 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351321  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   3.3  
XP_001609666  variant erythrocyte surface antigen-1, alpha subun...    22   6.8  

>EAY07361.1 on XP_001351321  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3467

 Score = 22.7 bits (47), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 9/12 (75%), Positives = 10/12 (83%)

Query: 16   EYIKSGTIPEGF 27
            E +KSGTIPE F
Sbjct: 1298 EELKSGTIPENF 1309



>EAY07361.1 on XP_001609666  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1269

 Score = 21.9 bits (45), Expect = 6.8,   Method: Composition-based stats.
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 2/34 (5%)

Query: 41  KIKQPLDR--EGILRKIKLHEDNIAELKKKLEEL 72
           K+K+ L +  EG+       +D + E KKKL+EL
Sbjct: 641 KVKEALRKAKEGLETAKNGLKDKLEEAKKKLDEL 674




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07363.1 hypothetical protein TVAG_204690 [Trichomonas
vaginalis G3]
         (446 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001352170  MSP1  (Invasion)  [Plasmodium falciparum]                27   4.2  

>EAY07363.1 on XP_001352170  MSP1  (Invasion)  [Plasmodium falciparum]
          Length = 1720

 Score = 26.6 bits (57), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 15/106 (14%)

Query: 306  LKSLLRSTEEDKQSYEERQKSVEVD-IKHLSDTINNMKQDIDLNNSYEEEIDFSQFRNFP 364
            +K  ++S  +      E QK+   D IK L DT   ++   DL N Y+ ++D        
Sbjct: 1018 IKQFVKSNSKVITGLTETQKNALNDEIKKLKDT---LQLSFDLYNKYKLKLD-------- 1066

Query: 365  SEERILELKTSISEREQQLETLSERKETYEEEISSLSNRIHILKDL 410
               R+   K  + + + Q++ L+  KE  E +++SL+N  ++L++ 
Sbjct: 1067 ---RLFNKKKELGQDKMQIKKLTLLKEQLESKLNSLNNPHNVLQNF 1109




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07367.1 hypothetical protein TVAG_204730 [Trichomonas
vaginalis G3]
         (251 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07368.1 hypothetical protein TVAG_204740 [Trichomonas
vaginalis G3]
         (869 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAG32024  MIC10  (Others)  [Toxoplasma gondii]                         26   8.9  
XP_820135   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   9.6  

>EAY07368.1 on AAG32024  MIC10  (Others)  [Toxoplasma gondii]
          Length = 198

 Score = 25.8 bits (55), Expect = 8.9,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 53/123 (43%), Gaps = 6/123 (4%)

Query: 420 NKELKEKFAKLKKQKDKNAKKQKHNNSKYSENEKIEKVTNEKSQNSEKSQNEKLQNEKSQ 479
           ++E +++  +L+ Q  +  ++ K    KY E  + +    E+   +++ Q   +Q  K  
Sbjct: 67  DEEYRKRHEELQNQSPEEVEEAKR---KYHEELRRKA---EEDAETKRKQEAVIQELKEV 120

Query: 480 NPEKSQYENSKNSEKVNDEKVTDSENEVEEIDPNEKFMEKNTTGDFVVDLMNSEYCRVLD 539
             ++   E ++  EK  DE+  + E   +E+   +  ME+        D    E  R   
Sbjct: 121 AKKRGLREAAEREEKRIDEQQANYEQRQQELRDMDSAMEERLMQQRKKDQEERELARKNS 180

Query: 540 DKI 542
           DK+
Sbjct: 181 DKV 183



>EAY07368.1 on XP_820135   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1519

 Score = 26.2 bits (56), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 1/76 (1%)

Query: 403  VEEKSLEEKVADVHTRMNKELKEKFAKLKKQKDKNAKKQKHNNSKYSENEKIEKVTNEKS 462
             E KS E K A+      K  ++K A+ K  + K+A+  K    K +E++  E  + E  
Sbjct: 1041 AEPKSAEPKPAEPKPAEPKPAEQKSAESKPAEQKSAE-SKPAEQKSAESKPAEPKSAEPK 1099

Query: 463  QNSEKSQNEKLQNEKS 478
               +KS   K   +KS
Sbjct: 1100 PAEQKSAESKPAEQKS 1115




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07369.1 hypothetical protein TVAG_204750 [Trichomonas
vaginalis G3]
         (421 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_805751   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   7.3  

>EAY07369.1 on XP_805751   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 784

 Score = 25.4 bits (54), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)

Query: 286 VPSIVSNQGEKNIFEISELLFAYRMNESL 314
            P+  SN GEK IFE+++  F+  MN +L
Sbjct: 28  APTEASNSGEKIIFEVND-SFSDSMNATL 55




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07370.1 hypothetical protein TVAG_204760 [Trichomonas
vaginalis G3]
         (522 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_814156   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.37 
XP_001349035  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   4.1  

>EAY07370.1 on XP_814156   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 759

 Score = 30.0 bits (66), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 5/65 (7%)

Query: 290 FGKQFGHITKFASYNNSRMKFNVGQ---ALEFLKNRSKYYKL--YSEDMIKGKISKQFSK 344
            G Q   + +      S +K N G     +E  KN  K   L  YS+D + GK+SK  S 
Sbjct: 229 LGDQHNSLKQLIGSGGSGVKMNDGTLVFPVEGTKNDGKTVSLILYSKDAVGGKLSKGMSD 288

Query: 345 FSEKV 349
              +V
Sbjct: 289 GGCRV 293



>EAY07370.1 on XP_001349035  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2239

 Score = 26.6 bits (57), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 156 VFVGFTMNSLKIENNEKSTLKNILKDIKFNAISIYMDPTPHVFDL 200
           +++G +    K++ N KS  +NI K++K  A   Y DP  + + L
Sbjct: 198 LYLGNSREKEKLQTNLKSIFQNIYKNLKKPAQKHYSDPHANFYKL 242




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07374.1 hypothetical protein TVAG_204800 [Trichomonas
vaginalis G3]
         (153 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609618  variant erythrocyte surface antigen-1, alpha subun...    23   6.7  
XP_806381   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   6.9  

>EAY07374.1 on XP_001609618  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1325

 Score = 23.5 bits (49), Expect = 6.7,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 1/66 (1%)

Query: 64  LKEVNEYYQE-QEKQSILLDENRDSIPADCDTYTNLICEIQSLDKEISERKTQNSKINSN 122
           LKEV+   ++   K    +D  ++ I    +    ++ E++   KE+ E++  N   N+N
Sbjct: 763 LKEVDGALEKATNKDGKEVDPGKNKISEAINKVLEMLKEMEKQLKEVLEKEQSNMDENTN 822

Query: 123 IKKLEK 128
           +   EK
Sbjct: 823 LNGHEK 828



>EAY07374.1 on XP_806381   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1045

 Score = 23.5 bits (49), Expect = 6.9,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 17/38 (44%)

Query: 5   FNKIFKSTKKENNHDQKGPNDKSNSPATPAVIPIFIET 42
           F    +S  KE   ++ G ND S     P  + + +ET
Sbjct: 840 FEMFSESNDKEQPEEEGGTNDMSGETTFPVAVSLSMET 877




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07375.1 hypothetical protein TVAG_204810 [Trichomonas
vaginalis G3]
         (736 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAM47175  Rh4  (Adhesin)  [Plasmodium falciparum]                      30   0.73 
AAM47192  Rh4  (Adhesin)  [Plasmodium falciparum]                      30   0.73 
AAM47174  Rh4  (Adhesin)  [Plasmodium falciparum]                      30   0.79 
XP_001347692  PfEMP1  (Establishment)  [Plasmodium falciparum]         29   0.98 
XP_844689  VSG  (Establishment)  [Trypanosoma brucei]                  27   4.8  
XP_001609619  variant erythrocyte surface antigen-1, beta subuni...    26   10.0 

>EAY07375.1 on AAM47175  Rh4  (Adhesin)  [Plasmodium falciparum]
          Length = 1711

 Score = 29.6 bits (65), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 16/164 (9%)

Query: 420  LEENYTSIENWAKDTQNKCADQMESLLKDIETGVSNLHSNLPALDHIASHIADIEKAVQD 479
            L+EN T+ EN  KD   K   ++ + LKDI   V N ++ L   + I + + +  K +++
Sbjct: 1201 LQENITTFENQYKDLIIKMNHKINNNLKDITHIVINDNNTLQEQNRIYNELQNKIKQIKN 1260

Query: 480  ANKYAMDKILSINAEYENLLSDFS----SMREVYM--ANLNDFVN--RVNNIHIHAKIED 531
                 +  + + N  Y   + ++S    S   ++M   N+N+ +N  R N   +  KI +
Sbjct: 1261 -----VSDVFTHNINYSQQILNYSQAQNSFFNIFMKFQNINNDINSKRYN---VQKKITE 1312

Query: 532  AVNRKDVYDYVTNYESYIDSVFSGLESQLAILTSGADKILAGVD 575
             +N  D+ +Y  N    I   F  ++ QL    +  + I   ++
Sbjct: 1313 IINSYDIINYNKNNIKDIYQQFKNIQQQLNTTETQLNHIKQNIN 1356



>EAY07375.1 on AAM47192  Rh4  (Adhesin)  [Plasmodium falciparum]
          Length = 1716

 Score = 29.6 bits (65), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 36/161 (22%), Positives = 71/161 (44%), Gaps = 10/161 (6%)

Query: 420  LEENYTSIENWAKDTQNKCADQMESLLKDIETGVSNLHSNLPALDHIASHIADIEKAVQD 479
            L+EN T+ EN  KD   K   ++ + LKDI   V N ++ L   + I + + +  K +++
Sbjct: 1200 LQENITTFENQYKDLIIKMNHKINNNLKDITHIVINDNNTLQEQNRIYNELQNKIKQIKN 1259

Query: 480  ANKYAMDKILSINAEYENLLSDFSSMREVYMANLNDFVNRVNNI-----HIHAKIEDAVN 534
                 +  + + N  Y   + ++S  +  +      F N  N+I     ++  KI + +N
Sbjct: 1260 -----VSDVFTHNINYSQQILNYSQAQNSFFNIFMKFQNINNDINSKRYNVQKKITEIIN 1314

Query: 535  RKDVYDYVTNYESYIDSVFSGLESQLAILTSGADKILAGVD 575
              D+ +Y  N    I   F  ++ QL    +  + I   ++
Sbjct: 1315 SYDIINYNKNNIKDIYQQFKNIQQQLNTTETQLNHIKQNIN 1355



>EAY07375.1 on AAM47174  Rh4  (Adhesin)  [Plasmodium falciparum]
          Length = 1711

 Score = 29.6 bits (65), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 36/161 (22%), Positives = 71/161 (44%), Gaps = 10/161 (6%)

Query: 420  LEENYTSIENWAKDTQNKCADQMESLLKDIETGVSNLHSNLPALDHIASHIADIEKAVQD 479
            L+EN T+ EN  KD   K   ++ + LKDI   V N ++ L   + I + + +  K +++
Sbjct: 1199 LQENITTFENQYKDLIIKMNHKINNNLKDITHIVINDNNTLQEQNRIYNELQNKIKQIKN 1258

Query: 480  ANKYAMDKILSINAEYENLLSDFSSMREVYMANLNDFVNRVNNI-----HIHAKIEDAVN 534
                 +  + + N  Y   + ++S  +  +      F N  N+I     ++  KI + +N
Sbjct: 1259 -----VSDVFTHNINYSQQILNYSQAQNSFFNIFMKFQNINNDINSKRYNVQKKITEIIN 1313

Query: 535  RKDVYDYVTNYESYIDSVFSGLESQLAILTSGADKILAGVD 575
              D+ +Y  N    I   F  ++ QL    +  + I   ++
Sbjct: 1314 SYDIINYNKNNIKDIYQQFKNIQQQLNTTETQLNHIKQNIN 1354



>EAY07375.1 on XP_001347692  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2994

 Score = 29.3 bits (64), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 6/80 (7%)

Query: 309 SSIDLLP---KMFNENLESLTNSIQYSIDKVNEECESDTSSINLQIDDTFDVTSSTFNEI 365
           +++D +P   + F E  E      +  + KV  EC  +TS       D +D T +   +I
Sbjct: 308 TNLDYVPQFLRWFTEWAEEFCRIRKIKLGKVKNECRGETSGKRYCSGDGYDCTKT---DI 364

Query: 366 SKEITDTVTKVKKIQEESTK 385
           S+ I        + +EE  K
Sbjct: 365 SRNIFYMDLDCPRCEEECRK 384



>EAY07375.1 on XP_844689  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 509

 Score = 26.9 bits (58), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 7/64 (10%)

Query: 243 AKTKIQSENAMKDLVSVMNYSTTSVSVYLSKAIQDTSQAKA---EAAEKLKTNLALLNNL 299
           AKT++Q+E   K ++S+  Y+  + S   +K   D S+ KA    A +   TN ALL+N 
Sbjct: 226 AKTEVQAEGC-KAVISIGYYAKFTAS---TKESDDNSEVKAIKIFAGDNASTNCALLHNA 281

Query: 300 SLKS 303
             KS
Sbjct: 282 ERKS 285



>EAY07375.1 on XP_001609619  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 1086

 Score = 25.8 bits (55), Expect = 10.0,   Method: Compositional matrix adjust.
 Identities = 14/62 (22%), Positives = 31/62 (50%), Gaps = 4/62 (6%)

Query: 604 KPQTPIELLEIEPEKPIIEEKEVENQENGENKDIISNNVEDSKSV----KSEEEKNDVHE 659
           KP+T  E+L      P  ++     Q  G+  D+++N  +D   +    + + +K D+H+
Sbjct: 386 KPRTIREILYWLSALPYCDKYRELVQRMGDKTDLVTNGSDDKNKIVLHGEGDGKKTDLHK 445

Query: 660 EE 661
           ++
Sbjct: 446 DK 447




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07381.1 hypothetical protein TVAG_204880 [Trichomonas
vaginalis G3]
         (181 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_829778  VSG  (Establishment)  [Trypanosoma brucei]                  25   2.6  
ABR92024  MSA-1  (Invasion)  [Babesia bovis]                           24   5.8  

>EAY07381.1 on XP_829778  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 493

 Score = 25.0 bits (53), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 15/64 (23%)

Query: 66  FVKYALEKASEIQEKKMKNFAE---LYVKLTESF------------EFEVNVRTDKFKAL 110
            VK  +    E  +K +KNF E   L   L+E++            E E+N  TDK KA 
Sbjct: 282 LVKEDVHACGETTDKAIKNFLEPQSLKTSLSEAYKKTGEKTAEKQAEEEINKATDKAKAT 341

Query: 111 LENL 114
            ++L
Sbjct: 342 ADDL 345



>EAY07381.1 on ABR92024  MSA-1  (Invasion)  [Babesia bovis]
          Length = 330

 Score = 23.9 bits (50), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 5/48 (10%)

Query: 121 NIYEDAEALKTVYSEDTPFYLVA-----FDKIDELSKLDKFDEIKNNL 163
           N+   A   K   ++++ FY +A     FDK     ++D F E KNN+
Sbjct: 175 NVNGMAGVCKGFLNQESEFYKLAESFDAFDKGKYHGRIDNFAEPKNNV 222




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07382.1 hypothetical protein TVAG_204890 [Trichomonas
vaginalis G3]
         (230 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07384.1 CAMK family protein kinase [Trichomonas
vaginalis G3]
         (328 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    71   9e-15

>EAY07384.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 70.9 bits (172), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 95/189 (50%), Gaps = 13/189 (6%)

Query: 16  YKVIKTLGKGGFAVVVLAEDIKTHEYVAIKIVDRAEIVNHKMLLFLENELRLSSRFHHPN 75
           Y++++ +G+G F+ V    +  T +   IKI+   +    K  + +   LR       PN
Sbjct: 55  YEIVRKIGRGKFSEVFEGLNTVTKDKCVIKILKPVKKKKIKREIKILQNLRGG-----PN 109

Query: 76  IVEVYDIIY--ETDIIMIIMEYLPNRDLQTLLERGMCFALDEQVTIAYKILDALNYLHQR 133
           I+++ DI+   ++    +I E++ N D +TL        + +     Y++L A+NY H +
Sbjct: 110 IIKLLDIVKDPQSRTPSLIFEHVNNTDFKTLYP---TLTIQDIKYYIYQLLKAMNYCHSQ 166

Query: 134 GVSHRDIKPENILFDAQLQ-PKLIDFGLSR--ENASALSTFCGTAFYMAPELVNENVYDG 190
           G+ HRDIKP N++ D + +  +LID+GL+         S    T +Y  PEL+ +  Y  
Sbjct: 167 GIMHRDIKPHNVMIDHEKKILRLIDWGLAEFYHPEQEYSVRVATRYYKGPELLVDMRYYD 226

Query: 191 RKSDIWAFG 199
              DIW+ G
Sbjct: 227 YSLDIWSIG 235




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07385.1 CAMK family protein kinase [Trichomonas
vaginalis G3]
         (335 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    77   1e-16

>EAY07385.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 76.6 bits (187), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 105/210 (50%), Gaps = 16/210 (7%)

Query: 7   YDINSSCCQIRIPKTVGKYDVIKTIGKGSFAVVVLGYDPKTNEKVAIKILDRYEITKLGS 66
           +D  +   +  +P +   Y++++ IG+G F+ V  G +  T +K  IKIL   +  K+  
Sbjct: 40  WDYENITLKWNVPDS---YEIVRKIGRGKFSEVFEGLNTVTKDKCVIKILKPVKKKKIKR 96

Query: 67  LLYLENELRLSSRFDHPNIIKVFDVIYEPD--IIMIVMEYVPSGDLQTLLSKGMEFSSEE 124
            + +   LR       PNIIK+ D++ +P      ++ E+V + D +TL       + ++
Sbjct: 97  EIKILQNLRGG-----PNIIKLLDIVKDPQSRTPSLIFEHVNNTDFKTLYPT---LTIQD 148

Query: 125 QIRIAYEVLQGLQYLHQRGISHRDLKPENIMFD-EQLHPKLIDFGLSK--ENSNVMHTYC 181
                Y++L+ + Y H +GI HRD+KP N+M D E+   +LID+GL++            
Sbjct: 149 IKYYIYQLLKAMNYCHSQGIMHRDIKPHNVMIDHEKKILRLIDWGLAEFYHPEQEYSVRV 208

Query: 182 GTIFYMAPEIFQTDTYDGMKADVWAIGVTL 211
            T +Y  PE+     Y     D+W+IG  L
Sbjct: 209 ATRYYKGPELLVDMRYYDYSLDIWSIGCML 238




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07389.1 Leucine Rich Repeat family protein
[Trichomonas vaginalis G3]
         (813 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 28   2.0  
ABA06462  MSA-2c  (Invasion)  [Babesia bovis]                          28   2.4  
ABA06457  MSA-2c  (Invasion)  [Babesia bovis]                          28   2.4  
ABA06461  MSA-2c  (Invasion)  [Babesia bovis]                          27   5.1  
AAL15428  MSA-2c  (Invasion)  [Babesia bovis]                          27   5.1  

>EAY07389.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 28.5 bits (62), Expect = 2.0,   Method: Composition-based stats.
 Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 12/82 (14%)

Query: 380  NLD----KSILNMCLNK-----SDY--YLIPSTVKTISNEAFKSITVLTRIEFESSD-NL 427
            NLD    K+++++ LN+     S+Y   LI    + I+NEA KS T+  +IE    D + 
Sbjct: 1211 NLDELNNKNLIDITLNEANKIESEYEKILIDDICEQITNEAKKSDTIKEKIESYKKDIDY 1270

Query: 428  TSIGSSAFRDDINLNSISIPTS 449
              +  S  R+D +LN   I  S
Sbjct: 1271 VDVDVSKTRNDHHLNGDKIHDS 1292



>EAY07389.1 on ABA06462  MSA-2c  (Invasion)  [Babesia bovis]
          Length = 265

 Score = 27.7 bits (60), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 7/66 (10%)

Query: 367 GAQVSIDDQLMFYN----LDKSILNMCLNKS-DYYLIPSTVKTISNEAFKSITVLTRIE- 420
           G+ +  DD  MFY+    +D+SIL   L K+ +   + +T  T +++A K++  L + + 
Sbjct: 35  GSHLLFDDMKMFYDVMRSIDESILKSILEKNFEAVGMEATSATKTHDALKAVKQLIKTDA 94

Query: 421 -FESSD 425
            F +SD
Sbjct: 95  PFNTSD 100



>EAY07389.1 on ABA06457  MSA-2c  (Invasion)  [Babesia bovis]
          Length = 265

 Score = 27.7 bits (60), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 7/66 (10%)

Query: 367 GAQVSIDDQLMFYN----LDKSILNMCLNKS-DYYLIPSTVKTISNEAFKSITVLTRIE- 420
           G+ +  DD  MFY+    +D+SIL   L K+ +   + +T  T +++A K++  L + + 
Sbjct: 35  GSHLLFDDMKMFYDVMRSIDESILKSILEKNFEAVGMEATSATKTHDALKAVKQLIKTDA 94

Query: 421 -FESSD 425
            F +SD
Sbjct: 95  PFNTSD 100



>EAY07389.1 on ABA06461  MSA-2c  (Invasion)  [Babesia bovis]
          Length = 265

 Score = 26.6 bits (57), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 19/66 (28%), Positives = 37/66 (56%), Gaps = 7/66 (10%)

Query: 367 GAQVSIDDQLMFYN----LDKSILNMCLNKS-DYYLIPSTVKTISNEAFKSITVLTRIE- 420
           G+ +  DD  MFY+    +D+S+L   L K+ +   + +T  T +++A K++  L + + 
Sbjct: 35  GSHLLFDDMKMFYDVMRSIDESMLKSILEKNFEAVGMEATSATKTHDALKAVKQLIKTDA 94

Query: 421 -FESSD 425
            F +SD
Sbjct: 95  PFNTSD 100



>EAY07389.1 on AAL15428  MSA-2c  (Invasion)  [Babesia bovis]
          Length = 265

 Score = 26.6 bits (57), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 19/66 (28%), Positives = 37/66 (56%), Gaps = 7/66 (10%)

Query: 367 GAQVSIDDQLMFYN----LDKSILNMCLNKS-DYYLIPSTVKTISNEAFKSITVLTRIE- 420
           G+ +  DD  MFY+    +D+S+L   L K+ +   + +T  T +++A K++  L + + 
Sbjct: 35  GSHLLFDDMKMFYDVMRSIDESMLKSILEKNFEAVGMEATSATKTHDALKAVKQLIKTDA 94

Query: 421 -FESSD 425
            F +SD
Sbjct: 95  PFNTSD 100




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07392.1 hypothetical protein TVAG_205000 [Trichomonas
vaginalis G3]
         (72 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAA30187  ESAG-6  (Establishment)  [Trypanosoma brucei]                24   0.96 
XP_001350415  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   1.8  
XP_001349514  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   2.3  
XP_813586   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   3.0  
XP_820135   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   3.2  
XP_813237   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   3.2  
XP_001348153  MAEBL  (Adhesin)  [Plasmodium falciparum]                22   4.1  
XP_805884   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   4.1  
XP_820186   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   4.3  
XP_818346   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   4.7  
XP_810391   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   4.8  
XP_814486   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   5.0  
XP_808064   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   5.2  
XP_809961   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   6.1  
XP_818295   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   6.2  
XP_815560   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   6.6  
XP_809726   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   8.1  

>EAY07392.1 on AAA30187  ESAG-6  (Establishment)  [Trypanosoma brucei]
          Length = 400

 Score = 23.9 bits (50), Expect = 0.96,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 1/30 (3%)

Query: 19  DTNSS-HGRSPYYENTTWGNGYLYGCTFEN 47
           DTN    G SP   N TWG G +   +++N
Sbjct: 222 DTNGILKGGSPTRHNLTWGGGVMNFGSYQN 251



>EAY07392.1 on XP_001350415  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3056

 Score = 23.1 bits (48), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 11/39 (28%), Positives = 16/39 (41%)

Query: 28  PYYENTTWGNGYLYGCTFENLQNCFVPKWLTKKVTENLK 66
           PY +N  W    +     E  +N FVP    +    NL+
Sbjct: 72  PYGDNDQWKCAIILSKVSEKPENVFVPPRRQRMCINNLE 110



>EAY07392.1 on XP_001349514  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2120

 Score = 23.1 bits (48), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 1/25 (4%)

Query: 48   LQNCFVPKWLTKKVTENLKLRGNFN 72
            ++NC V +W++ K TE   +RG FN
Sbjct: 1434 IKNC-VEQWISTKRTEWETIRGRFN 1457



>EAY07392.1 on XP_813586   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1748

 Score = 22.7 bits (47), Expect = 3.0,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 11  WEGQTANVDTNSSHGRSPYYENTTWGNGY 39
           WE     + T+  +GR   YE+T  GN +
Sbjct: 304 WEAGKIIMITSCEYGRRRVYESTDKGNTW 332



>EAY07392.1 on XP_820135   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1519

 Score = 22.7 bits (47), Expect = 3.2,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 11  WEGQTANVDTNSSHGRSPYYENTTWGNGY 39
           WE     + T+  +GR   YE+T  GN +
Sbjct: 303 WEAGKIIMITSCKYGRRRVYESTDKGNTW 331



>EAY07392.1 on XP_813237   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1496

 Score = 22.7 bits (47), Expect = 3.2,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 11  WEGQTANVDTNSSHGRSPYYENTTWGNGY 39
           WE     + T+  +GR   YE+T  GN +
Sbjct: 304 WEAGKIIMITSCEYGRRRVYESTDKGNTW 332



>EAY07392.1 on XP_001348153  MAEBL  (Adhesin)  [Plasmodium falciparum]
          Length = 2054

 Score = 22.3 bits (46), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 7/13 (53%), Positives = 10/13 (76%)

Query: 42  GCTFENLQNCFVP 54
           G T +N+Q CF+P
Sbjct: 285 GSTDQNIQRCFLP 297



>EAY07392.1 on XP_805884   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 438

 Score = 22.3 bits (46), Expect = 4.1,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 16/29 (55%)

Query: 11  WEGQTANVDTNSSHGRSPYYENTTWGNGY 39
           WE     + T+ ++GR   YE+T  GN +
Sbjct: 303 WEAGKIIMITSCNYGRRRVYESTDRGNTW 331



>EAY07392.1 on XP_820186   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1133

 Score = 22.3 bits (46), Expect = 4.3,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 11  WEGQTANVDTNSSHGRSPYYENTTWGNGY 39
           WE     + T+  +GR   YE+T  GN +
Sbjct: 304 WEAGKIIMITSCKYGRRRVYESTDKGNTW 332



>EAY07392.1 on XP_818346   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 927

 Score = 21.9 bits (45), Expect = 4.7,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 8/46 (17%)

Query: 13  GQTANVDTNSSHGRSPYYENTTWGNGYLYG--------CTFENLQN 50
           GQ+  + T ++H       N+T G+ Y+ G        C  EN+ +
Sbjct: 629 GQSVTLATETTHHVVLVVRNSTQGSAYVDGKQVGGDEACALENMDS 674



>EAY07392.1 on XP_810391   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 885

 Score = 21.9 bits (45), Expect = 4.8,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 11  WEGQTANVDTNSSHGRSPYYENTTWGNGY 39
           WE     + T+  +GR   YE+T  GN +
Sbjct: 302 WEAGKIIMITSCEYGRRRVYESTDKGNTW 330



>EAY07392.1 on XP_814486   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 948

 Score = 21.9 bits (45), Expect = 5.0,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 11  WEGQTANVDTNSSHGRSPYYENTTWGNGY 39
           WE     + T+  +GR   YE+T  GN +
Sbjct: 304 WEAGKIIMITSCEYGRRRVYESTDKGNTW 332



>EAY07392.1 on XP_808064   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 718

 Score = 21.9 bits (45), Expect = 5.2,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 11  WEGQTANVDTNSSHGRSPYYENTTWGNGY 39
           WE     + T+  +GR   YE+T  GN +
Sbjct: 304 WEAGKIIMITSCEYGRRRVYESTDKGNTW 332



>EAY07392.1 on XP_809961   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 916

 Score = 21.9 bits (45), Expect = 6.1,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 11  WEGQTANVDTNSSHGRSPYYENTTWGNGY 39
           WE     + T+  +GR   YE+T  GN +
Sbjct: 303 WEAGKIIMITSCKYGRRRVYESTDKGNTW 331



>EAY07392.1 on XP_818295   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 922

 Score = 21.6 bits (44), Expect = 6.2,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 11  WEGQTANVDTNSSHGRSPYYENTTWGNGY 39
           WE     + T+  +GR   YE+T  GN +
Sbjct: 305 WEAGKIIMITSCDYGRRRVYESTDKGNTW 333



>EAY07392.1 on XP_815560   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 922

 Score = 21.6 bits (44), Expect = 6.6,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 11  WEGQTANVDTNSSHGRSPYYENTTWGNGY 39
           WE     + T+  +GR   YE+T  GN +
Sbjct: 305 WEAGKIIMITSCDYGRRRVYESTDKGNTW 333



>EAY07392.1 on XP_809726   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 565

 Score = 21.6 bits (44), Expect = 8.1,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 11  WEGQTANVDTNSSHGRSPYYENTTWGNGY 39
           WE     + T+  +GR   YE+T  GN +
Sbjct: 304 WEDGKIIMITSCEYGRRRVYESTDKGNTW 332




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07393.1 hypothetical protein TVAG_205010 [Trichomonas
vaginalis G3]
         (217 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_816852   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.2  
XP_001610496  variant erythrocyte surface antigen-1, beta subuni...    25   3.1  
XP_818689   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   5.3  

>EAY07393.1 on XP_816852   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 739

 Score = 26.6 bits (57), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 20/48 (41%), Gaps = 10/48 (20%)

Query: 20  RAYREKAIEFYASGVSSQRINGTIQPTKPEYAFDQIDKRYDWCSNCGK 67
           R YRE  +E           N  I+P   +   + ID  +DW +  GK
Sbjct: 123 RVYREHPVER----------NKIIEPISSDVVAEYIDSSWDWSTLVGK 160



>EAY07393.1 on XP_001610496  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 1159

 Score = 25.4 bits (54), Expect = 3.1,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 3/43 (6%)

Query: 74  WIIFSIKNHIMNLEGY---FLKAGCCYDGCCCYDESKRCCECC 113
           W+++ I+     LEG    ++K  C  DGC     +  C E C
Sbjct: 951 WLVYLIEGFRTGLEGLKDDYMKVDCKGDGCTGKAGAVGCGESC 993



>EAY07393.1 on XP_818689   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 844

 Score = 24.6 bits (52), Expect = 5.3,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 12  NDNNAILKRAYREKAIEFYASGVSSQRINGTIQPTKPEYA-FDQIDKR 58
           N+NN  L   Y +K +E  +SG+ S  +   +Q  K   A + ++D R
Sbjct: 450 NNNNEKLIALYEKKGVEETSSGMFSVLLTAQLQRVKDVLATWKKVDGR 497




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07412.1 hypothetical protein TVAG_419540 [Trichomonas
vaginalis G3]
         (148 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001611205  variant erythrocyte surface antigen-1, beta subuni...    26   1.2  
XP_652394  Igl2  (Adhesin)  [Entamoeba histolytica]                    24   4.3  
XP_001610714  variant erythrocyte surface antigen-1, alpha subun...    24   4.4  
XP_001608668  variant erythrocyte surface antigen-1, alpha subun...    23   7.6  

>EAY07412.1 on XP_001611205  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 1146

 Score = 25.8 bits (55), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/31 (38%), Positives = 22/31 (70%), Gaps = 1/31 (3%)

Query: 6   IVSNDTTGT-MEQISENSAKKSSESYYYSEI 35
           +++N+ TG   ++ +++SA KSS + YYS I
Sbjct: 308 LLTNNKTGVPWKEFTKDSADKSSVAEYYSSI 338



>EAY07412.1 on XP_652394  Igl2  (Adhesin)  [Entamoeba histolytica]
          Length = 1105

 Score = 24.3 bits (51), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 10/36 (27%), Positives = 18/36 (50%)

Query: 92  DATLSCVKKSTEEVGHNIFGFSKQTNNFENVKDALS 127
           D   SC+ K  ++ G  + G S  TN  + + D ++
Sbjct: 112 DTCESCLSKDNDKCGECVIGMSTTTNGGQKLCDTVT 147



>EAY07412.1 on XP_001610714  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1231

 Score = 24.3 bits (51), Expect = 4.4,   Method: Composition-based stats.
 Identities = 10/31 (32%), Positives = 20/31 (64%)

Query: 54   DSVSVATKLSVQSFITQEKDKFHSVTEMLTK 84
            DS++V    + Q+   Q++D  H +TE+L++
Sbjct: 1126 DSLAVVIDKNKQAASQQDQDNKHPLTELLSQ 1156



>EAY07412.1 on XP_001608668  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1337

 Score = 23.5 bits (49), Expect = 7.6,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 24/55 (43%)

Query: 90  LSDATLSCVKKSTEEVGHNIFGFSKQTNNFENVKDALSKGFAEVLSDATRSCVAN 144
           L +A  +  K  TE     +    K+    EN KDAL+K      S+   + +AN
Sbjct: 749 LEEAKKAVEKAKTEGDNVRMAKLEKKMKALENAKDALNKLMTSGGSNGALNTLAN 803




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07415.1 ADP-ribosylation factor, putative
[Trichomonas vaginalis G3]
         (181 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BAD34969  Rab7B  (Establishment)  [Entamoeba histolytica]              29   0.12 
XP_819146   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   0.88 
XP_821669   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.1  
XP_822017   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   1.3  
XP_843642  VSG  (Establishment)  [Trypanosoma brucei]                  26   1.6  
XP_649196  Rab7A  (Establishment)  [Entamoeba histolytica]             25   3.1  
AAB86482  RabA  (Invasion)  [Entamoeba histolytica]                    25   3.6  
XP_652776  Rab11B  (Establishment)  [Entamoeba histolytica]            24   5.2  
XP_805259   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   5.7  

>EAY07415.1 on BAD34969  Rab7B  (Establishment)  [Entamoeba histolytica]
          Length = 207

 Score = 28.9 bits (63), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 3/81 (3%)

Query: 21 VTLLGLSGVGKTSLI-EYVAGVYNPDDPPIHTNGIVLTDIIIG--QLKYRFYDVSGFPSH 77
          + +LG SGVGKTSL+ +YV   ++           +  DI I   Q+  + +D +G    
Sbjct: 13 IIILGDSGVGKTSLLNQYVTKQFSSQYKATIGADFMTKDITINDQQISLQIWDTAGHERF 72

Query: 78 TSEWNKCIGDSDCVIYVVDPT 98
           S        +D  + V D T
Sbjct: 73 ASFGTAFYRGADVCMLVCDVT 93



>EAY07415.1 on XP_819146   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 825

 Score = 26.6 bits (57), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 7/48 (14%)

Query: 85  IGDSDCVIYVVDPTGI-------DAGLAFTQDTINRTRDNVVSRKLPV 125
           +GD  CV+   DP GI       D G A  Q+  + T  NV+    P+
Sbjct: 649 VGDESCVLKSKDPKGISHFYIGGDGGSAEGQEGFSVTATNVLLYNRPL 696



>EAY07415.1 on XP_821669   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 879

 Score = 26.6 bits (57), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 7/50 (14%)

Query: 83  KCIGDSDCVIYVVDPTGI-------DAGLAFTQDTINRTRDNVVSRKLPV 125
           K +GD  CV+ + D   I       D G A  QD ++ T  NV+    P+
Sbjct: 645 KSVGDESCVLKIADSKEISHFFIGGDGGRAEGQDDVSVTVRNVLLYNRPL 694



>EAY07415.1 on XP_822017   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 990

 Score = 26.2 bits (56), Expect = 1.3,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 13/64 (20%)

Query: 83  KCIGDSDCVIYVVDPTGI-------DAGLAFTQDTINRTRDNVVSRKLPV------YILL 129
           K +GD  CV+ + D   I       D   A +QD ++ T  NV+    P+       I  
Sbjct: 757 KSVGDESCVLKIADSKEISHFYIGGDGSGAGSQDDVSVTVRNVLLYNRPLSSAEIGSIKP 816

Query: 130 NKAP 133
           NKAP
Sbjct: 817 NKAP 820



>EAY07415.1 on XP_843642  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 534

 Score = 25.8 bits (55), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 12/32 (37%), Positives = 19/32 (59%)

Query: 2   GCANSSAVMGPSLNENPICVTLLGLSGVGKTS 33
           G AN+    G SL ++ +C+  L  SG G+T+
Sbjct: 205 GNANAQRRAGKSLKQDIMCICALLTSGQGQTA 236



>EAY07415.1 on XP_649196  Rab7A  (Establishment)  [Entamoeba histolytica]
          Length = 206

 Score = 24.6 bits (52), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 11/15 (73%), Positives = 13/15 (86%)

Query: 21 VTLLGLSGVGKTSLI 35
          V +LG SGVGKTSL+
Sbjct: 10 VIILGDSGVGKTSLM 24



>EAY07415.1 on AAB86482  RabA  (Invasion)  [Entamoeba histolytica]
          Length = 219

 Score = 24.6 bits (52), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 7/43 (16%)

Query: 4  ANSSAVMGPSLNENPICVTLLGLSGVGKTSLIE-YVAGVYNPD 45
          A S+ ++G +L        L+G  GVGKT+LI+ +  G Y  D
Sbjct: 17 ATSNLLIGGNLTR------LIGDVGVGKTALIQRFCFGTYTED 53



>EAY07415.1 on XP_652776  Rab11B  (Establishment)  [Entamoeba histolytica]
          Length = 211

 Score = 23.9 bits (50), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 10/26 (38%), Positives = 18/26 (69%), Gaps = 1/26 (3%)

Query: 21 VTLLGLSGVGKTS-LIEYVAGVYNPD 45
          + L+G SGVGK++ L+ +    ++PD
Sbjct: 13 IVLVGESGVGKSNLLLRFTRNEFDPD 38



>EAY07415.1 on XP_805259   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 800

 Score = 24.3 bits (51), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 12/47 (25%), Positives = 19/47 (40%), Gaps = 5/47 (10%)

Query: 74  FPSHTSEWNKCIGDSDCVIYVVDPTGIDAGLAFTQDTINRTRDNVVS 120
             +H  EW +C+      + + D T     + F+   IN   D V S
Sbjct: 249 LAAHKGEWTECLASGGSGVLMEDGT-----IVFSLMAINEKDDGVFS 290




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07417.1 Ornithine cyclodeaminase/mu-crystallin family
protein [Trichomonas vaginalis G3]
         (329 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_628559  gp900  (Adhesin)  [Cryptosporidium parvum]                  26   4.6  
XP_810953   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   6.4  

>EAY07417.1 on XP_628559  gp900  (Adhesin)  [Cryptosporidium parvum]
          Length = 1937

 Score = 25.8 bits (55), Expect = 4.6,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 16/24 (66%)

Query: 73   VPGNRARGLPLIPGKCLVYDNETG 96
            +P + + GLP IPG  ++ D +TG
Sbjct: 1671 LPSDPSTGLPFIPGFNVLVDPQTG 1694



>EAY07417.1 on XP_810953   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 958

 Score = 25.4 bits (54), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 17/54 (31%), Positives = 25/54 (46%)

Query: 259 GDIMDAINNGFIKEEQLMEFGTVINGDNEGRQNEKQITIAKMVGVAAQDTVASQ 312
           G + D  ++G  K+E L    TV   D+EG++  K     K  G  A+  V  Q
Sbjct: 528 GFLSDNFSDGTWKDEYLGVNATVKGNDDEGKKATKTSNGVKFHGAWAEWPVGKQ 581




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07424.1 surface antigen BspA-like [Trichomonas
vaginalis G3]
         (594 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_810288   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   1.6  
AAM47178  gp90  (Others)  [Trypanosoma cruzi]                          26   1.7  
CAA05261  PfSUB1  (Proteases)  [Plasmodium falciparum]                 27   4.9  

>EAY07424.1 on XP_810288   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 874

 Score = 28.1 bits (61), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 9/74 (12%)

Query: 302 VESNNENYTSYNGIVYTKDKEKLVCCPGGKTTALVFNY-------ILVIGSNAFYGCSKL 354
           V+ N+   T   G+ Y K+K+  V C GGKTT     +       ++++  N   G + +
Sbjct: 598 VQMNDSGKTVLLGLSYNKEKKWQVLCSGGKTTEHSSTWEKDTTHQVVLVLRNGTQGSAYV 657

Query: 355 --QNLSFEDGCHLE 366
             Q +  ++ C LE
Sbjct: 658 DGQRVGEDEACALE 671



>EAY07424.1 on AAM47178  gp90  (Others)  [Trypanosoma cruzi]
          Length = 70

 Score = 25.8 bits (55), Expect = 1.7,   Method: Composition-based stats.
 Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 4/58 (6%)

Query: 276 NITIPASVTTFDASAFIYCTSLTDIIVESNNENYTSYNGIVYTKDKEKLVCCPGGKTT 333
           N T+ ASVT  +A +      L   ++   N  YT   G++YT DKE +    G KTT
Sbjct: 17  NFTLVASVTIEEAPS--ADAPLMGAMLGDTNSQYTM--GVLYTADKEWVTIFNGKKTT 70



>EAY07424.1 on CAA05261  PfSUB1  (Proteases)  [Plasmodium falciparum]
          Length = 689

 Score = 26.6 bits (57), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 11/22 (50%), Positives = 15/22 (68%)

Query: 426 SLTTFTFGKYCALTAFGSNIFS 447
           S+ +F   KYC L A G+NI+S
Sbjct: 572 SINSFYSNKYCQLAAPGTNIYS 593




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07425.1 hypothetical protein TVAG_419670 [Trichomonas
vaginalis G3]
         (286 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_828103  VSG  (Establishment)  [Trypanosoma brucei]                  30   0.16 
AAK31247  variable surface protein IVe  (Establishment)  [Giardi...    26   1.2  

>EAY07425.1 on XP_828103  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 472

 Score = 30.0 bits (66), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)

Query: 101 SMQGCRKISTLNITNSITSVANMYLYDSYFTKIYIE 136
            +Q  +K +   + N IT  AN YL  +Y TKIYIE
Sbjct: 43  DLQKVQKRAAQMVKNKITGTAN-YLTQAYKTKIYIE 77



>EAY07425.1 on AAK31247  variable surface protein IVe  (Establishment)  [Giardia
          duodenalis]
          Length = 130

 Score = 26.2 bits (56), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)

Query: 25 ASLVDLYLPSTLQTITGSDTNYCFK-LANIYLPSGS 59
          AS V    P+   + TG+DT  C K L+  YL SGS
Sbjct: 16 ASGVCPACPANCASCTGTDTKTCTKCLSGYYLDSGS 51




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07426.1 hypothetical protein TVAG_419680 [Trichomonas
vaginalis G3]
         (1727 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_818220   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   1.4  
XP_001609315  variant erythrocyte surface antigen-1, alpha subun...    28   5.9  

>EAY07426.1 on XP_818220   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 768

 Score = 30.0 bits (66), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 16/112 (14%)

Query: 1215 TDDDRALSVDVRSLSNVYKAFDFSGKLGGSIALCIENSTLKISSRYRLKNNTSNTIRY-- 1272
            TDD R ++  V   + V   F+F+G   GS+A+   NS        R  NN    + Y  
Sbjct: 505  TDDYRCVNASVTKAAKVKNGFNFTGP--GSMAIWPVNS--------REDNNQYGFVNYDF 554

Query: 1273 -LLLGTNICQILSNNISFLPPECKLDSISMQTIALKKKVKKTGDVTTIIYNS 1323
             ++    I Q  S + S L      D    + I L   V KT D  T+ Y +
Sbjct: 555  TVVATVTIHQAPSESTSLLAAGLG-DGAGKKIIGLSYSVSKTWD--TVFYGT 603



>EAY07426.1 on XP_001609315  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1338

 Score = 28.1 bits (61), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 10/26 (38%), Positives = 17/26 (65%)

Query: 1540 VNKRDTVMHPLLSMIPSFGKLSVDLK 1565
            +NK+D   HPL +++   GKL  D++
Sbjct: 1247 MNKQDQEQHPLTNLLTQVGKLQYDIR 1272




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07427.1 actin, putative [Trichomonas vaginalis G3]
         (135 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_809607   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   0.27 
AAA91133  AP65-3  (Adhesin)  [Trichomonas vaginalis]                   23   5.1  

>EAY07427.1 on XP_809607   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 920

 Score = 27.3 bits (59), Expect = 0.27,   Method: Composition-based stats.
 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 3/59 (5%)

Query: 11  LNDAQTKVRTNPLEALKLVLEEMPVREK--KASPDGIKTPQGQKLYEDAKNAAAKSVLT 67
           L+D + +V  NP +A   V  E PV     ++SPDG K  QGQ L     +  + S ++
Sbjct: 706 LDDNEIRV-LNPNKANIQVQVERPVEGDAIQSSPDGGKEEQGQSLESSRADGVSASTVS 763



>EAY07427.1 on AAA91133  AP65-3  (Adhesin)  [Trichomonas vaginalis]
          Length = 255

 Score = 23.5 bits (49), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 3/49 (6%)

Query: 62  AKSVLTIVLSIDKAKLPATIKGLTDEERDTLMKFIYRAFT-EEYDHMYL 109
           A SV   V +I +AKLPA   G+T  +   L K    AFT EE D + L
Sbjct: 3   ASSVAAPVRNICRAKLPALKTGMTLLQDGDLSK--GSAFTKEERDRLNL 49




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07431.1 hypothetical protein TVAG_419730 [Trichomonas
vaginalis G3]
         (560 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAR36877  CP2  (Invasion)  [Cryptosporidium parvum]                    27   2.2  

>EAY07431.1 on AAR36877  CP2  (Invasion)  [Cryptosporidium parvum]
          Length = 255

 Score = 27.3 bits (59), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 10/106 (9%)

Query: 160 DSIYSFVIPVQHDFNGQKGNFLLVAQ--NNTVVSFPSGEVSTYKDMNVSNTVITITLENG 217
           D   SF +P+ H F  ++ + +L  +  N  + +  + +    K   V ++  T  + +G
Sbjct: 32  DGHLSFRLPLNHSF--ERSDIILSGKCLNGIIFTAMALDSGAIKGSVVPDSSGTTVVTSG 89

Query: 218 KYI-TIQHKASVQLLYNFIDKSV--TPTKLIINSLQEFQEKLNIQS 260
             I T+Q  A+ + LY  ID  +   P K+   SL ++   L+ QS
Sbjct: 90  NPIYTVQTTATFEFLYRMIDPRIKDAPYKI---SLMKYYSALSSQS 132




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07441.1 hypothetical protein TVAG_419830 [Trichomonas
vaginalis G3]
         (78 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001610720  variant erythrocyte surface antigen-1, beta subuni...    24   1.5  
XP_001609666  variant erythrocyte surface antigen-1, alpha subun...    23   1.7  
XP_845136  VSG  (Establishment)  [Trypanosoma brucei]                  23   2.5  
XP_001351437  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   2.6  
XP_001351435  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   2.9  
XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]                 22   5.8  

>EAY07441.1 on XP_001610720  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 1102

 Score = 23.9 bits (50), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/23 (47%), Positives = 13/23 (56%)

Query: 4   KVTEAMKQKFLVEYIKSGAIPEG 26
           K TEA K+ +L  Y K  A P G
Sbjct: 189 KATEATKKCYLSAYCKPTAQPSG 211



>EAY07441.1 on XP_001609666  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1269

 Score = 23.5 bits (49), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/28 (42%), Positives = 16/28 (57%)

Query: 48  KEGILRKIKLHEDNIAELKKKLEELEKG 75
           KEG+       +D + E KKKL+EL  G
Sbjct: 650 KEGLETAKNGLKDKLEEAKKKLDELTNG 677



>EAY07441.1 on XP_845136  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 481

 Score = 23.1 bits (48), Expect = 2.5,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 33  KDGRVQFRKRKQPLDKEGILRKIKLHEDNIAELKKKLEELEKGREL 78
           K    Q ++ K+P   + IL +  LH+  + E K++ E LE  R+L
Sbjct: 349 KPAGTQLKEIKEPAVLKQILSE-TLHDREVREQKQQAELLEAKRQL 393



>EAY07441.1 on XP_001351437  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2277

 Score = 23.1 bits (48), Expect = 2.6,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 25/41 (60%), Gaps = 5/41 (12%)

Query: 28  YVHTMKDGRVQFRKRKQPLDKEGILRKIKLHEDNIAELKKK 68
           YV  + + + QF K+KQ  DKE     IK++++  + ++++
Sbjct: 396 YVDWINNQKEQFDKQKQKYDKE-----IKIYKNGASGIRRQ 431



>EAY07441.1 on XP_001351435  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2209

 Score = 23.1 bits (48), Expect = 2.9,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 17  YIKSGAIPEGFYVHTMKDG-RVQFRKRKQPLDKEGILRKIKLHEDNIAELKKKL-EELEK 74
           ++K   IPEG Y  T++   +++F       DK+  L   ++   ++ ++KK L EE +K
Sbjct: 722 FVKQKGIPEGCYFTTLEGVLQIEFLNEGSAQDKQNSLDAKEIQ--HLKQIKKILDEEKQK 779

Query: 75  GRE 77
            +E
Sbjct: 780 NQE 782



>EAY07441.1 on XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]
          Length = 2112

 Score = 21.9 bits (45), Expect = 5.8,   Method: Composition-based stats.
 Identities = 8/17 (47%), Positives = 12/17 (70%)

Query: 31   TMKDGRVQFRKRKQPLD 47
            T  +G  + RKRK+PL+
Sbjct: 1949 TCGEGSFKIRKRKEPLE 1965




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07442.1 hypothetical protein TVAG_419840 [Trichomonas
vaginalis G3]
         (418 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351321  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   8.2  

>EAY07442.1 on XP_001351321  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3467

 Score = 25.4 bits (54), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 15/51 (29%), Positives = 26/51 (50%)

Query: 199  KLSQISSGKSIKEYIKYYDIYLKFCNNFPNTLRRIKERMKRRDIVKANEDY 249
            + +QI    + KEY   YD+  K  N F      +++ +   D++K NE+Y
Sbjct: 2791 EWNQIKDHYNKKEYGNGYDMSHKVKNYFEKNENELRKWIDNYDVLKNNEEY 2841




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07452.1 hypothetical protein TVAG_499380 [Trichomonas
vaginalis G3]
         (69 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07453.1 hypothetical protein TVAG_499390 [Trichomonas
vaginalis G3]
         (320 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07454.1 hypothetical protein TVAG_499400 [Trichomonas
vaginalis G3]
         (352 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001608668  variant erythrocyte surface antigen-1, alpha subun...    29   0.57 
XP_001609667  variant erythrocyte surface antigen-1, alpha subun...    28   0.97 
XP_001349740  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   2.9  
XP_001608665  variant erythrocyte surface antigen-1, alpha subun...    26   4.1  
XP_001610567  variant erythrocyte surface antigen-1, alpha subun...    26   4.9  
XP_819737   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   5.4  
XP_001352170  MSP1  (Invasion)  [Plasmodium falciparum]                25   7.4  

>EAY07454.1 on XP_001608668  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1337

 Score = 28.9 bits (63), Expect = 0.57,   Method: Composition-based stats.
 Identities = 45/229 (19%), Positives = 92/229 (40%), Gaps = 38/229 (16%)

Query: 55  QIEQVKEYQASLVEKRKIDYE-SKLSQIHVSHLQDVQ--------QLQEFQAAQVAELQK 105
           ++++VKE    LV K K+  E +K  +     L DV         QL   Q A   + + 
Sbjct: 655 RVDKVKEDLVGLVNKVKVGLEGNKDEEADGEELFDVLKAIGSVVVQLGNAQEALEGKAES 714

Query: 106 EFQECLDKVGIQSKEKSSEENAAIENELDNVRTLLQSLQEALEEAKTQREDASSGTFDQV 165
           +  E + +   ++K++  +   A+E+E+      L+  ++A+E+AKT+ ++      ++ 
Sbjct: 715 KVIEGVKQKLGEAKKELEKAKEAVESEVGMDGKELEEAKKAVEKAKTEGDNVRMAKLEKK 774

Query: 166 ADVDRGVIDELRETL-----------------------VIRTEDRMRNLRSSKAKLQQCI 202
                   D L + +                       +    ++ R+  S+K ++   I
Sbjct: 775 MKALENAKDALNKLMTSGGSNGALNTLANGGGNGSLQQIGSANEKDRDYSSAKDQISDAI 834

Query: 203 NLIE------DLDRKHELSVQQRRQKLSDCQKEYEETKRQLSEERNAQR 245
           N I        L ++   ++   R  +SD    YE+T   L E  N+ +
Sbjct: 835 NGINQTLEALQLLKRASTTLNGHRDDISDVFMIYEKTITDLKEIYNSPK 883



>EAY07454.1 on XP_001609667  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1303

 Score = 28.1 bits (61), Expect = 0.97,   Method: Composition-based stats.
 Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 14/82 (17%)

Query: 222 KLSDCQKEYEETKRQLSEERNAQRADEQQRLREVTLKNKRLQRLKK-----RREADHTSN 276
           KL D  ++  E   QL    NAQ A E+++  E+    K+LQ  KK     R+E +   +
Sbjct: 660 KLKDVLEKIGEVVVQLG---NAQEALERRKGEEIKGVQKKLQEAKKGLEEARKELETGED 716

Query: 277 LRQTALE------ADLVRGAGG 292
           L +  L+       +L  G GG
Sbjct: 717 LDEDDLKEAKEALGELTNGGGG 738



>EAY07454.1 on XP_001349740  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3346

 Score = 26.6 bits (57), Expect = 2.9,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 28/47 (59%)

Query: 152 TQREDASSGTFDQVADVDRGVIDELRETLVIRTEDRMRNLRSSKAKL 198
           ++ E+A S +  +  +  RGV++E+ + +  +TE   +++R  K KL
Sbjct: 7   SEEEEAKSPSLTESHNSARGVLEEIGKKIKDKTEKESKHVRQLKGKL 53



>EAY07454.1 on XP_001608665  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1326

 Score = 26.2 bits (56), Expect = 4.1,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 16/58 (27%)

Query: 116 IQSKEKSSEENA-AIENELDNVRTLLQSLQEALE---------------EAKTQREDA 157
           + SK KS EE A A+  ++  V   L + QEALE               EAKT+ EDA
Sbjct: 687 VVSKGKSEEEKAKALLEKIGEVVVQLGNAQEALEGKKTEAIEKVKEELTEAKTKLEDA 744



>EAY07454.1 on XP_001610567  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1315

 Score = 25.8 bits (55), Expect = 4.9,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 29/60 (48%)

Query: 99  QVAELQKEFQECLDKVGIQSKEKSSEENAAIENELDNVRTLLQSLQEALEEAKTQREDAS 158
           +VA   KE  + +  V +Q            +  ++ V+  LQ  +E L++A+T  E+A+
Sbjct: 670 EVALKVKEVLQAIGNVVVQLGNAQEALEGKKKEAIEGVKAKLQEAKEGLDKARTALEEAA 729



>EAY07454.1 on XP_819737   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1112

 Score = 25.4 bits (54), Expect = 5.4,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 124 EENAAI-ENELDNVRTLLQSLQEALEEAKTQREDASSGTFDQVADVD 169
           E+NA + E E     TL ++ +     +  Q+ED  S    +VADV+
Sbjct: 862 EDNAQLSEGETSRQATLNEAKKSMARSSDVQKEDLQSTELTEVADVE 908



>EAY07454.1 on XP_001352170  MSP1  (Invasion)  [Plasmodium falciparum]
          Length = 1720

 Score = 25.0 bits (53), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 11/55 (20%)

Query: 307 REKLNQELAN-----------RKRDLKQKEKLLFEAREENDSLKSEIGKLKHIIR 350
           R KLN   AN           R  +L   +KL+F  R+  D++K  +GK++  I+
Sbjct: 204 RAKLNDVCANDYCQIPFNLKIRANELDVLKKLVFGYRKPLDNIKDNVGKMEDYIK 258




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07456.1 hypothetical protein TVAG_499420 [Trichomonas
vaginalis G3]
         (871 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_804223   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.54 
XP_806744   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.55 
XP_805195   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   1.1  
XP_805196   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   1.1  
XP_816459   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   1.5  
XP_820072   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   2.0  
XP_820184   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   2.0  
XP_001610497  variant erythrocyte surface antigen-1, alpha subun...    27   5.9  
XP_001349512  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   6.0  
XP_843646  VSG  (Establishment)  [Trypanosoma brucei]                  27   7.8  

>EAY07456.1 on XP_804223   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 746

 Score = 30.4 bits (67), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 6/62 (9%)

Query: 92  AEEDSKSIANLNDDRDKKQNALNQSKESLRAAMEQNQIVSSRITELENKLEECVAAERSK 151
           +EE + S A LN+D  +KQ   N   + + AA+    +  S +       E  +AAE + 
Sbjct: 440 SEEITTSYAKLNEDDPEKQRGRNGVDDPVPAALPSPVVAGSSVP------EPAIAAESAG 493

Query: 152 KD 153
            D
Sbjct: 494 ND 495



>EAY07456.1 on XP_806744   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 789

 Score = 30.4 bits (67), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 7/78 (8%)

Query: 76  SEITGNNSKVKTVSKLAEEDSKSIANLNDDRDKKQNALNQSKESLRAAMEQNQIVSSRIT 135
            ++T  +  V   SK +EE + S A LN+D  +KQ   N   + + AA+    +  S + 
Sbjct: 468 GQVTSTDVSVAPESK-SEEITASYAKLNEDDPEKQRGKNGVDDPVPAALPSPVVAGSSVP 526

Query: 136 ELENKLEECVAAERSKKD 153
                 E  +AAE +  D
Sbjct: 527 ------EPAIAAESAGND 538



>EAY07456.1 on XP_805195   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 769

 Score = 29.3 bits (64), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 55/132 (41%), Gaps = 16/132 (12%)

Query: 51  AKLFGILQKSMTNQARYIEKCRVLESEITGNNSKVKTVSKLAEEDSKSIANLND-DRDKK 109
           A L  +L  +  N   +I++   L + +T N  KVK   +L E +S  I +LN  D + +
Sbjct: 512 AGLVAVLSDAANNDT-WIDEYLCLNATVT-NAKKVKDGVQLTESNSGVIWSLNTRDNNVR 569

Query: 110 QNALNQSKESLRAAMEQNQIVSSRITELENKLEECVAAERSKKDYLK------------Q 157
              LN  + +L A +   +I S   + L   L +   A   +  Y K             
Sbjct: 570 HVFLNH-RFTLVATVSIQKIPSKNASLLAAMLGDAGVAHFMRLSYTKDKRWETVFKDQTT 628

Query: 158 LKNRRSELKKEH 169
            K    ELKKEH
Sbjct: 629 PKGSTWELKKEH 640



>EAY07456.1 on XP_805196   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 731

 Score = 29.3 bits (64), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 55/132 (41%), Gaps = 16/132 (12%)

Query: 51  AKLFGILQKSMTNQARYIEKCRVLESEITGNNSKVKTVSKLAEEDSKSIANLND-DRDKK 109
           A L  +L  +  N   +I++   L + +T N  KVK   +L E +S  I +LN  D + +
Sbjct: 474 AGLVAVLSDAANNDT-WIDEYLCLNATVT-NAKKVKDGVQLTESNSGVIWSLNTRDNNVR 531

Query: 110 QNALNQSKESLRAAMEQNQIVSSRITELENKLEECVAAERSKKDYLK------------Q 157
              LN  + +L A +   +I S   + L   L +   A   +  Y K             
Sbjct: 532 HVFLNH-RFTLVATVSIQKIPSKNASLLAAMLGDAGVAHFMRLSYTKDKRWETVFKDQTT 590

Query: 158 LKNRRSELKKEH 169
            K    ELKKEH
Sbjct: 591 PKGSTWELKKEH 602



>EAY07456.1 on XP_816459   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 904

 Score = 28.9 bits (63), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 2/46 (4%)

Query: 297 SLQGIITSL--EKEISDSREILNQKQKETDQLQQVCQKKEQERENV 340
              GI++ L  E E ++ +E+L + +K+T  L++V   KE++R NV
Sbjct: 122 GFSGIVSQLLTETEDNEPKEVLKEAKKDTQVLEEVTSAKEEKRVNV 167



>EAY07456.1 on XP_820072   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 755

 Score = 28.5 bits (62), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 15/57 (26%), Positives = 29/57 (50%)

Query: 51  AKLFGILQKSMTNQARYIEKCRVLESEITGNNSKVKTVSKLAEEDSKSIANLNDDRD 107
           A L  +L  +++    +I++   L + +T N  KV+   +L E DS+ +  +N   D
Sbjct: 496 AGLVAVLSNALSGDDTWIDEYLCLNATVTPNAKKVRYGFQLTEPDSRVMWPVNTRGD 552



>EAY07456.1 on XP_820184   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1050

 Score = 28.5 bits (62), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 6/62 (9%)

Query: 92  AEEDSKSIANLNDDRDKKQNALNQSKESLRAAMEQNQIVSSRITELENKLEECVAAERSK 151
           +EE + S A LN+D  +KQ   N   + + AA     +  S ++      E  +AAE + 
Sbjct: 742 SEESTASYAKLNEDDPEKQRRKNGVDDPVPAAPPSTVVAGSSVS------EPAIAAESAG 795

Query: 152 KD 153
            D
Sbjct: 796 ND 797



>EAY07456.1 on XP_001610497  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1315

 Score = 26.9 bits (58), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 35/173 (20%), Positives = 72/173 (41%), Gaps = 15/173 (8%)

Query: 130 VSSRITELENKLEECVAAERSKKDYLKQLKNRRSELKKEHDELTQQIPQYQENNKQTSEK 189
           + + + +L N  E   A E  KK+ ++ +K    + K E D+  Q++ Q    + QTS+ 
Sbjct: 673 LGNVVVQLGNAQE---ALEGKKKEAIEGVKTVLGKAKGELDKAKQELEQVNGKDGQTSQA 729

Query: 190 LEQKDREIEETLNDLKRIEDMVAAKRLEEQKERQTLMMLERDRDATRVRLQEARQKTKD- 248
           + +  + +E   N        + +  LE+    +     ++D  + + ++  A +  +D 
Sbjct: 730 ISKAKKALEALTNGGSGALHTLVSDGLEKAANGEE---WKKDYSSAKDKISAAIKAVRDA 786

Query: 249 -------RSAEVQAKQEESRNLTKKVQDLKRRFESAK-VEKQDMADKCTKLQK 293
                  + A     +E    L   ++D+     S + V  +D  DKC K  K
Sbjct: 787 LEGLLLLKDAGASGLKENKETLLGAIKDMLDMVSSTRCVHCKDHKDKCGKTPK 839



>EAY07456.1 on XP_001349512  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2980

 Score = 26.9 bits (58), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 6/57 (10%)

Query: 801  LTQRLEMARDDVKEFRKEL------GEAEQELLQQRNKWIAQKKKDIKRRRELQEQE 851
            +T  +E   DD  +  K+L      GE  Q +     KWI  K+++ K+ +EL  QE
Sbjct: 2290 VTHWVEYFLDDYNKINKKLNRCMKDGEGYQCIKDCVEKWIQNKREEWKKIKELYLQE 2346



>EAY07456.1 on XP_843646  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 526

 Score = 26.6 bits (57), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 13/29 (44%), Positives = 17/29 (58%)

Query: 550 DKKSLNDVIEKDQKLRAQLTAIQIKTTTS 578
            K +LND+  K + LR QLT I I  +T 
Sbjct: 44  GKPALNDIPTKWRNLRQQLTDINISLSTG 72




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07458.1 hypothetical protein TVAG_499440 [Trichomonas
vaginalis G3]
         (114 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAO83837  SUB2  (Protease)  [Toxoplasma gondii]                        23   3.6  
XP_001351514  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   7.6  
XP_001351515  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   8.3  

>EAY07458.1 on AAO83837  SUB2  (Protease)  [Toxoplasma gondii]
          Length = 255

 Score = 23.5 bits (49), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 1/50 (2%)

Query: 63  RDENQDTAVFSIPLSFTESSKTKYISHGRSELGLDLQSVLT-PHNGTIYP 111
           RDE+QDT V   PL   + S +  +   R++   + +  +T P +    P
Sbjct: 170 RDEHQDTDVEQAPLIKEDESDSPSVEEPRAQPPENKEDAITKPRDADWNP 219



>EAY07458.1 on XP_001351514  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2201

 Score = 22.7 bits (47), Expect = 7.6,   Method: Composition-based stats.
 Identities = 9/20 (45%), Positives = 13/20 (65%)

Query: 49   PTLGPTDLSNVSLKRDENQD 68
            P+LGP D S    K++EN +
Sbjct: 1678 PSLGPKDDSEKDEKKEENSE 1697



>EAY07458.1 on XP_001351515  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2181

 Score = 22.7 bits (47), Expect = 8.3,   Method: Composition-based stats.
 Identities = 9/20 (45%), Positives = 13/20 (65%)

Query: 49   PTLGPTDLSNVSLKRDENQD 68
            P+LGP D S    K++EN +
Sbjct: 1658 PSLGPKDDSEKDEKKEENSE 1677




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07470.1 AGC family protein kinase [Trichomonas
vaginalis G3]
         (398 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001352242  PfEMP1  (Establishment)  [Plasmodium falciparum]         29   0.62 
AAK97081  gGSP  (Others)  [Giardia duodenalis]                         27   2.1  
XP_817612   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   3.0  
XP_815560   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   5.2  

>EAY07470.1 on XP_001352242  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2264

 Score = 28.9 bits (63), Expect = 0.62,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 31/76 (40%)

Query: 296  EEQIQNELLSNQETDGVIIYNIAKSVYNANQVFKAISHISFSPGDGRKVSLDSDHSLTKS 355
            EE+    + S+   D   IY   K   +A    +A+ H       G K S D D+ +  +
Sbjct: 1322 EEEHGKVITSSNNADDKNIYEKLKDYTSAANFLEALKHCKDGQTGGEKKSNDQDNKINFN 1381

Query: 356  GSLSSFGSKEQVKVKP 371
               ++FG  E  K  P
Sbjct: 1382 DPKTTFGPLEYCKTCP 1397



>EAY07470.1 on AAK97081  gGSP  (Others)  [Giardia duodenalis]
          Length = 255

 Score = 26.6 bits (57), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 9/98 (9%)

Query: 235 QSIIDL-FKKLITASPAHRYNTRDIKEHPWFAKTLYQLLVPFLAQNDQFSNEVFDSIKAF 293
           Q++ DL F+ L T++          +E   F K +  L   F A    FS+ ++D + A 
Sbjct: 36  QALTDLTFQSLFTSA------ANAAREGDAFTKLMTILSFTFSADICDFSSVIYDELIAS 89

Query: 294 ANEEQIQNELLSNQETDGVIIYNIAKSVYNANQVFKAI 331
               ++ +   S ++T  + +Y     V+N   +FKA+
Sbjct: 90  FTLVEVSDGCKSTEKTATIDMY--MTGVFNLADIFKAL 125



>EAY07470.1 on XP_817612   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 922

 Score = 26.6 bits (57), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 10/72 (13%)

Query: 51  LAIDNNKEYFENDLYCLKTFFHPFIAKYITKLEDSKFVYIVLEPMRGGTFKELLEAKTRW 110
           L+ D N E+         +  H +  +Y+TK E  K  ++VL+ M  G     ++ K+ +
Sbjct: 582 LSYDKNMEW---------SVEHGWYQRYLTKWELDKTYHVVLK-MHNGVGSVYVDGKSLF 631

Query: 111 NEAQARPYFAQL 122
           N A  RP   +L
Sbjct: 632 NLALPRPSDEEL 643



>EAY07470.1 on XP_815560   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 922

 Score = 25.8 bits (55), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 10/72 (13%)

Query: 51  LAIDNNKEYFENDLYCLKTFFHPFIAKYITKLEDSKFVYIVLEPMRGGTFKELLEAKTRW 110
           L+ D N E+         +  H +  +Y+TK E  K  ++VL+ M  G     ++ K+  
Sbjct: 582 LSYDKNMEW---------SVEHGWYQRYLTKWELDKTYHVVLK-MHNGVGSVYVDGKSLL 631

Query: 111 NEAQARPYFAQL 122
           N A  RP   +L
Sbjct: 632 NLALPRPSDEEL 643




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07471.1 3'5'-cyclic nucleotide phosphodiesterase
family protein [Trichomonas vaginalis G3]
         (1334 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_809489   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           42   3e-04
XP_806239   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           35   0.020
XP_001349512  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   6.2  
XP_812771   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   7.4  

>EAY07471.1 on XP_809489   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 787

 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 98/242 (40%), Gaps = 56/242 (23%)

Query: 662 LAAGLDAD--LLVFGEDEGEYAEEEEFYAEDEMANNISIDQNLQMNLHGMTPHEQYQFAQ 719
           +A  +D+D  L+V+ + E  Y  E+E Y  ++  +  S  Q L+  L    PH    F  
Sbjct: 378 VALHMDSDDGLMVYVDGETIYDSEDEVYGHEDDEDYESFPQKLKTLLR---PHGISHFY- 433

Query: 720 NNPDINDGGFHPFGGIGVPKSESGHFNFS-PNALLK----ADDEEEEQNQKDDQQNQQEN 774
                        GG G  KSESG+ + +  N LL      DDE +   + D     + N
Sbjct: 434 ------------IGGDG--KSESGNIDVTVSNVLLYNRALKDDELKALTKADAVGTPEAN 479

Query: 775 VPVNQFGVPYIQSTHSNLGLIDQNALGNQMMLVTSDDEESSQEQEQPPRKDSPRHVAFPD 834
           VP  + G P  QSTH++  LI  ++  + +  V  D   S Q Q+             PD
Sbjct: 480 VPSLK-GAP--QSTHASETLIQPDSETSVIKEVKQDATSSQQRQDA------------PD 524

Query: 835 NPPEGEVPFAHGSPFAEKSDNGNSPDDKKS--------------PPPGSPAPKANPQFNG 880
            PPE +   A  S     SD+    D K+               PPP SPAP+A      
Sbjct: 525 RPPEEKNKKAAAS--VTYSDSHAVADTKRREEQMEKAATDVDDLPPPLSPAPEAANGHKS 582

Query: 881 PE 882
           P+
Sbjct: 583 PD 584



>EAY07471.1 on XP_806239   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 475

 Score = 35.4 bits (80), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 96/234 (41%), Gaps = 56/234 (23%)

Query: 662 LAAGLDAD--LLVFGEDEGEYAEEEEFYAEDEMANNISIDQNLQMNLHGMTPHEQYQFAQ 719
           +A  +D+D  L+V+ + E  Y  E+E Y  ++  +  S  Q L+  L    PH    F  
Sbjct: 66  VALHMDSDDGLMVYVDGETIYDSEDEVYGHEDDEDYESFPQKLKTLLR---PHGISHFY- 121

Query: 720 NNPDINDGGFHPFGGIGVPKSESGHFNFS-PNALLK----ADDEEEEQNQKDDQQNQQEN 774
                        GG G  KSESG+ + +  N LL      DDE +   + D     + N
Sbjct: 122 ------------IGGDG--KSESGNIDVTVSNVLLYNRALKDDELKALTKADAVGTPEAN 167

Query: 775 VPVNQFGVPYIQSTHSNLGLIDQNALGNQMMLVTSDDEESSQEQEQPPRKDSPRHVAFPD 834
           VP  + G P  QSTH++  LI  ++  + +  V  D   S Q Q+             PD
Sbjct: 168 VPSLK-GAP--QSTHASETLIQPDSETSVIKEVKQDATSSQQRQD------------APD 212

Query: 835 NPPEGEVPFAHGSPFAEKSDNGNSPDDKKS--------------PPPGSPAPKA 874
            PPE +   A  S     SD+    D K+               PPP SPAP+A
Sbjct: 213 RPPEEKNKKAAAS--VTYSDSHAVADTKRREEQMEKAATDVDDLPPPLSPAPEA 264



>EAY07471.1 on XP_001349512  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2980

 Score = 27.7 bits (60), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 12/60 (20%)

Query: 360  DENKLQVTIPF----ACRALSFLFLPKSLDEEIDQFETRLKSLLEVAEILSGVLDIDTLL 415
            DE+ L  TIPF    A  +++FLFL K     ID        LL V  I     +I T L
Sbjct: 2520 DESILHTTIPFGVALALGSIAFLFLKKKTKSTID--------LLRVINIPKSDYNIPTKL 2571



>EAY07471.1 on XP_812771   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 924

 Score = 27.3 bits (59), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 26/120 (21%), Positives = 48/120 (40%), Gaps = 28/120 (23%)

Query: 273 QYLRI---TKDSDAENKDFLQEGKLGFSSD--------------------SFVYLTAINV 309
           +YL +    KD+D  NK  L EG + F+                      +F  +  +++
Sbjct: 523 EYLGVNATVKDNDGGNKATLHEGGVKFTGAWAEWPVGSQGENQLFHFANYNFTLVATVSI 582

Query: 310 PDVTQAANYLP----EIDGVDQVAALSMPFVDENECTWVCILKSPKGKPTFSALDENKLQ 365
             V Q  + +P    + +G +    L + + + NE  W+ +  S   K   SAL+  K +
Sbjct: 583 DGVPQEGSPIPLMGVKTNGAENTVLLGLSYSN-NEKKWMLLCGSGNRKELSSALEPGKTR 641




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07473.1 hypothetical protein TVAG_499600 [Trichomonas
vaginalis G3]
         (246 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609667  variant erythrocyte surface antigen-1, alpha subun...    30   0.18 
XP_845637  VSG  (Establishment)  [Trypanosoma brucei]                  28   0.50 
XP_813123   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   5.3  
XP_001610714  variant erythrocyte surface antigen-1, alpha subun...    25   6.3  
ABR92024  MSA-1  (Invasion)  [Babesia bovis]                           24   7.6  
XP_001349740  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   8.2  
XP_001609540  variant erythrocyte surface antigen-1, alpha subun...    24   8.5  
XP_001610568  variant erythrocyte surface antigen-1, alpha subun...    24   8.8  

>EAY07473.1 on XP_001609667  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1303

 Score = 29.6 bits (65), Expect = 0.18,   Method: Composition-based stats.
 Identities = 33/137 (24%), Positives = 61/137 (44%), Gaps = 20/137 (14%)

Query: 7   QHVQAAIQQLQQAFEYSKKQKSEELKTWQKRIEDLEQQLSYMQQNLQRSEE------GKA 60
           + +   + QL  A E  +++K EE+K  QK++++ ++ L   ++ L+  E+       +A
Sbjct: 666 EKIGEVVVQLGNAQEALERRKGEEIKGVQKKLQEAKKGLEEARKELETGEDLDEDDLKEA 725

Query: 61  K-AEAELNNA-------LAMNENLKAQNQALMQALQDKEEEINRFLSLNQSLKNIVDQIP 112
           K A  EL N        LA   N       +  A  D ++E   + S    +  ++ +I 
Sbjct: 726 KEALGELTNGGGGALHTLANGSNTAGSLHQVATAGADWQKE---YSSAKDKISEVIHKIQ 782

Query: 113 YVKSDTTSKQNFIPQFS 129
            V    T+ Q  +PQ S
Sbjct: 783 EV---LTALQTEVPQVS 796



>EAY07473.1 on XP_845637  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 499

 Score = 28.1 bits (61), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 18/109 (16%)

Query: 112 PYVKSDTTSKQNFIPQFSQEP----KTSLQNSSPQKI-EAKPQSYI---PSQTQSQQVST 163
           PY  SD+TS  N++  +   P        Q +   K+ +A  Q+Y+   PS T       
Sbjct: 161 PYAFSDSTSTSNYLTDYGSAPFPTGGGHFQTTKNCKLFQANLQTYLGADPSNTDKMSFG- 219

Query: 164 RNISPIAKSPPKS-----TTRTASKSSQFIKAAKEELSPADFNHMISEI 207
             I  +AKS P +     T++TA      +  A E+L P    H+ S++
Sbjct: 220 GGIIVLAKSTPLTDSNVKTSKTAVSHVNSVLQALEKLKP----HLQSDL 264



>EAY07473.1 on XP_813123   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1048

 Score = 25.0 bits (53), Expect = 5.3,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 44/95 (46%), Gaps = 7/95 (7%)

Query: 71  AMNENLKAQNQALMQALQDKEEEINRFLSLNQSLKNIVDQIPYVKSDTTSKQNFIPQFSQ 130
           A N      +++  + +    EE+N   +  Q  +N+++ +P V S T +  + +P    
Sbjct: 728 AANTGALVASESNSEEIATSHEELNEGDTDEQEEENVLNLVPAVSSSTVAGGSSVP---- 783

Query: 131 EPKTSLQNSSPQKIEAKPQSYIPSQTQSQQVSTRN 165
           EP T+ + +   + +   Q    S+ ++ Q +T N
Sbjct: 784 EPATATEIAGNSRSDDNAQL---SEGETSQQATLN 815



>EAY07473.1 on XP_001610714  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1231

 Score = 24.6 bits (52), Expect = 6.3,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 5/91 (5%)

Query: 31  LKTWQKRIEDLEQQLSYMQQNLQRSEEGKAKA-EAELNNALAMNENLKAQNQALMQALQD 89
           LK   +RI ++  QL   Q+ L+  E+   +  + EL  A    +  K + +   +AL  
Sbjct: 600 LKELLQRIGEVVVQLGNAQEALEGKEKKAIQGVKRELEKAKGALDTAKGKLEKAKKAL-- 657

Query: 90  KEEEINRFLSLNQSLKNIVDQIPYVKSDTTS 120
             E++         LKN+VD I   +SD T+
Sbjct: 658 --EKLTTNGGGGGILKNVVDAIGKAQSDVTN 686



>EAY07473.1 on ABR92024  MSA-1  (Invasion)  [Babesia bovis]
          Length = 330

 Score = 24.3 bits (51), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 11/35 (31%), Positives = 21/35 (60%)

Query: 29  EELKTWQKRIEDLEQQLSYMQQNLQRSEEGKAKAE 63
           E +K   +RI+ +++ L  ++ N   +EE + KAE
Sbjct: 126 ESIKAMYRRIDHMDKYLKTLRWNNDIAEEDREKAE 160



>EAY07473.1 on XP_001349740  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3346

 Score = 24.3 bits (51), Expect = 8.2,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 10/105 (9%)

Query: 31   LKTWQKRIEDLEQQLSYMQQNLQRSEEGKAKAEAE--------LNNALAMNENLKAQNQA 82
            + TWQ + + +EQ+ S + +  ++  +   K            LN  L  N+  K  + A
Sbjct: 1082 INTWQPQWKQMEQKYSQLYEEAKKYNDSSRKDTTNKDDYVLQFLNKLLTQNKGNKTYDTA 1141

Query: 83   LMQALQDKEEEINRFLSLNQSLKNIVDQIPYVKSDTTSKQNFIPQ 127
              +    +E  I+      Q  K    +IP   ++T +   F PQ
Sbjct: 1142 --EGYVHQEAHISDCQKQTQFCKKRNGEIPSSDTETDNNYAFRPQ 1184



>EAY07473.1 on XP_001609540  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1349

 Score = 24.3 bits (51), Expect = 8.5,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 25/40 (62%)

Query: 9   VQAAIQQLQQAFEYSKKQKSEELKTWQKRIEDLEQQLSYM 48
           V AAI  LQ+A +  K+   +++   Q+R+ + ++ LS++
Sbjct: 799 VSAAIDGLQKALDALKEGVEKDIIEKQRRLLEAKKNLSHV 838



>EAY07473.1 on XP_001610568  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1329

 Score = 24.3 bits (51), Expect = 8.8,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 31/63 (49%)

Query: 7   QHVQAAIQQLQQAFEYSKKQKSEELKTWQKRIEDLEQQLSYMQQNLQRSEEGKAKAEAEL 66
           + +   + QL  A E  + +K+E ++  +K++E  + +L   +  L+ +  GK     +L
Sbjct: 677 EKIGEVVVQLGNAQEALEGKKTEAIEGVKKKLEGAKTELGKAKGELETAVNGKDGLNGKL 736

Query: 67  NNA 69
             A
Sbjct: 737 AEA 739




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07481.1 hypothetical protein TVAG_499690 [Trichomonas
vaginalis G3]
         (183 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAM47175  Rh4  (Adhesin)  [Plasmodium falciparum]                      27   0.56 
AAM47192  Rh4  (Adhesin)  [Plasmodium falciparum]                      27   0.56 
AAM47174  Rh4  (Adhesin)  [Plasmodium falciparum]                      27   0.57 
XP_810953   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   2.1  
XP_808081   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   3.1  
XP_812514   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   5.3  

>EAY07481.1 on AAM47175  Rh4  (Adhesin)  [Plasmodium falciparum]
          Length = 1711

 Score = 27.3 bits (59), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 4/49 (8%)

Query: 49  DQKACQTYINDIKTKRIQQAQDRLNLRKEIIEKQAAKEKERILQQQEDY 97
           +Q+  Q Y N++K  RI++ Q ++NL K+I+E    KEKE  +  +  Y
Sbjct: 614 EQEYIQIYKNELK-DRIKETQTKINLFKQILE---LKEKEHYITNKHTY 658



>EAY07481.1 on AAM47192  Rh4  (Adhesin)  [Plasmodium falciparum]
          Length = 1716

 Score = 27.3 bits (59), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 4/49 (8%)

Query: 49  DQKACQTYINDIKTKRIQQAQDRLNLRKEIIEKQAAKEKERILQQQEDY 97
           +Q+  Q Y N++K  RI++ Q ++NL K+I+E    KEKE  +  +  Y
Sbjct: 616 EQEYIQIYKNELK-DRIKETQTKINLFKQILE---LKEKEHYITNKHTY 660



>EAY07481.1 on AAM47174  Rh4  (Adhesin)  [Plasmodium falciparum]
          Length = 1711

 Score = 27.3 bits (59), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 4/49 (8%)

Query: 49  DQKACQTYINDIKTKRIQQAQDRLNLRKEIIEKQAAKEKERILQQQEDY 97
           +Q+  Q Y N++K  RI++ Q ++NL K+I+E    KEKE  +  +  Y
Sbjct: 616 EQEYIQIYKNELK-DRIKETQTKINLFKQILE---LKEKEHYITNKHTY 660



>EAY07481.1 on XP_810953   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 958

 Score = 25.4 bits (54), Expect = 2.1,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 5/51 (9%)

Query: 7   SVSEIPVPDNLSDLERIEFN-AYKQALVEL----EQEWLQLKNGENPDQKA 52
           S+ ++P  + L  L  ++ N + K  L+ L    E++W  L +GENP+ ++
Sbjct: 601 SIEKVPTTEGLISLMGVQMNDSGKTVLLGLSYNKEKKWKVLCSGENPEDQS 651



>EAY07481.1 on XP_808081   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 893

 Score = 25.0 bits (53), Expect = 3.1,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 36/70 (51%)

Query: 12  PVPDNLSDLERIEFNAYKQALVELEQEWLQLKNGENPDQKACQTYINDIKTKRIQQAQDR 71
           PV D+ +    + + + K    + E++++ L   +  D+K     +  + T+++Q+ +D 
Sbjct: 403 PVSDDDAAASSLLYRSGKSGDNKEEEKFIALYEKKKEDEKPSPGMVYVLLTEQLQRVKDV 462

Query: 72  LNLRKEIIEK 81
           L   KE+ E+
Sbjct: 463 LATWKEVDER 472



>EAY07481.1 on XP_812514   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 925

 Score = 24.3 bits (51), Expect = 5.3,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 23/45 (51%)

Query: 34  ELEQEWLQLKNGENPDQKACQTYINDIKTKRIQQAQDRLNLRKEI 78
           E E E + L   +  D K     ++ + T+R+Q+ +D L   KE+
Sbjct: 432 EKEDELIALYEKKKKDVKPSPGMVSVLLTERLQRVKDVLTTWKEV 476




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07482.1 hypothetical protein TVAG_499700 [Trichomonas
vaginalis G3]
         (2010 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351561  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   5.6  
XP_001348946  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   5.6  
AAW78165  TRAP  (Invasion)  [Plasmodium falciparum]                    28   7.8  
AAW78148  TRAP  (Invasion)  [Plasmodium falciparum]                    27   9.5  

>EAY07482.1 on XP_001351561  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3553

 Score = 28.5 bits (62), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 3/69 (4%)

Query: 956  EYSTDDEALHTTHIDQDGKPIIRRRPISSYK---DSDCDYEYLTDDEALHTKKYDKDGKP 1012
            E ++ D  +H  H+  D    + R P S+Y+    + C+ +Y       H    D++   
Sbjct: 36   EQASKDAKIHGHHLKGDLAKAVFRHPFSAYRPNYGNPCELDYRFHTNVWHRNAEDRNPCL 95

Query: 1013 IVRRRKFSH 1021
              R ++FS+
Sbjct: 96   FSRAKRFSN 104



>EAY07482.1 on XP_001348946  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3553

 Score = 28.5 bits (62), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 3/69 (4%)

Query: 956  EYSTDDEALHTTHIDQDGKPIIRRRPISSYK---DSDCDYEYLTDDEALHTKKYDKDGKP 1012
            E ++ D  +H  H+  D    + R P S+Y+    + C+ +Y       H    D++   
Sbjct: 36   EQASKDAKIHGHHLKGDLAKAVFRHPFSAYRPNYGNPCELDYRFHTNVWHRNAEDRNPCL 95

Query: 1013 IVRRRKFSH 1021
              R ++FS+
Sbjct: 96   FSRAKRFSN 104



>EAY07482.1 on AAW78165  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 27.7 bits (60), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 58/134 (43%), Gaps = 20/134 (14%)

Query: 515 ELTPIKEEDL-TESTPEDDMNQRRTEHSSSTKPIKSKTIKAHYADSENQDSNAAANANEE 573
           E  P K E L     PEDD  + R ++ +  KP             EN   N     +  
Sbjct: 284 ERCPPKWEPLDVPQEPEDDQPRPRGDNFAVQKP------------KENIIDNNPQEPSPN 331

Query: 574 EEEHKENSSSGTWDSEANKNNKPN-----EEEEINEDKDKNIEEKDLENKEDDQKE-ADK 627
            EE K+ + +G +D + N  N PN     +E  I ED +K +     +N EDD++E  D 
Sbjct: 332 PEEGKDENPNG-FDLDENPENPPNPDIPQQEPNIPEDSEKEVPSDVPKNPEDDREENFDI 390

Query: 628 DANEEKKETDENNM 641
               E K  ++NN+
Sbjct: 391 PKKPENKHDNQNNL 404



>EAY07482.1 on AAW78148  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 27.3 bits (59), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 58/134 (43%), Gaps = 20/134 (14%)

Query: 515 ELTPIKEEDL-TESTPEDDMNQRRTEHSSSTKPIKSKTIKAHYADSENQDSNAAANANEE 573
           E  P K E L     PEDD  + R ++S+  +P             EN   N     +  
Sbjct: 284 ERCPPKWEPLDVPDEPEDDQPRPRGDNSAVQEP------------EENIIDNNPQEPSPN 331

Query: 574 EEEHKENSSSGTWDSEANKNNKPN-----EEEEINEDKDKNIEEKDLENKEDDQKEA-DK 627
            EE K  + +G +D + N  N PN     +E  I ED +K +     +N EDD++E  D 
Sbjct: 332 PEEGKGENPNG-FDLDENPENPPNPDIPQQEPNIPEDSEKEVPSDVPKNPEDDREENFDI 390

Query: 628 DANEEKKETDENNM 641
               E K  ++NN+
Sbjct: 391 PKKPENKHDNQNNL 404




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07484.1 hypothetical protein TVAG_499720 [Trichomonas
vaginalis G3]
         (1135 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_817842   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   5.3  
XP_813123   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   5.3  

>EAY07484.1 on XP_817842   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 897

 Score = 27.3 bits (59), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 3/49 (6%)

Query: 981  EPSVDQTISFTLETSGLFSTVSSLFTAFSWTDMSL---LQTMGAEQKAQ 1026
            +PS D   S  + T+GL   +S  F+  +W D  L       GA  KA+
Sbjct: 499  DPSADTACSAAMPTAGLVGFLSGSFSESTWRDEYLGVNATVTGAAAKAE 547



>EAY07484.1 on XP_813123   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1048

 Score = 27.7 bits (60), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 1/58 (1%)

Query: 593 TSVCLYTVDRFRNELFDKYSEEIDVISLSAD-HPASKCCKTGSVVEVEDNVDNTKTLY 649
           T+V LY      +EL++ ++ ++ + SL  +  P  +   TG++V  E N +   T +
Sbjct: 691 TNVMLYNEKLLGSELYELHASKVTIPSLGVEKQPTEQAANTGALVASESNSEEIATSH 748




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07488.1 hypothetical protein TVAG_499760 [Trichomonas
vaginalis G3]
         (107 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CAA96437  MIC2  (Invasion)  [Eimeria tenella]                          30   0.012
XP_001351563  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   0.94 
XP_829793  VSG  (Establishment)  [Trypanosoma brucei]                  25   1.5  
XP_812794   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   1.6  
XP_803398  VSG  (Establishment)  [Trypanosoma brucei]                  24   1.8  
XP_806668   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   1.9  
XP_806132   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   2.0  
XP_001611205  variant erythrocyte surface antigen-1, beta subuni...    24   2.4  
XP_808550   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   2.8  
XP_812751   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   3.1  
XP_821703   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   3.7  
XP_001351321  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   3.9  
XP_812793   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   4.6  
ABA06451  MSA-2a2  (Invasion)  [Babesia bovis]                         23   4.6  
AAL15423  MSA-2b  (Invasion)  [Babesia bovis]                          23   4.6  
XP_821294   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   4.7  
XP_819384   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   5.6  
XP_808182   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   5.7  
XP_807842   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   5.8  
XP_809739   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   5.8  
XP_804688   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   7.1  
XP_810237   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   7.8  
XP_811677   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   7.8  
XP_812792   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   7.9  
XP_818403   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   8.0  
XP_812339   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   9.4  

>EAY07488.1 on CAA96437  MIC2  (Invasion)  [Eimeria tenella]
          Length = 255

 Score = 30.4 bits (67), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 3/54 (5%)

Query: 47  EGKNIEELIE-EGAKKMISTGAAVAAAPAAGAAGAAAEEAPKEEAKEEEPAAPL 99
           E + + +L E EGA      G A A  P +G    +AEEAPK E  +E+P+ PL
Sbjct: 96  ETRKVVQLRESEGASGASGPGPAPAEKPPSGQG--SAEEAPKGEGGQEKPSVPL 147



>EAY07488.1 on XP_001351563  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2149

 Score = 25.4 bits (54), Expect = 0.94,   Method: Composition-based stats.
 Identities = 12/21 (57%), Positives = 14/21 (66%), Gaps = 4/21 (19%)

Query: 84   EAPKEEAK----EEEPAAPLD 100
            E PKEE K    EE+PA+P D
Sbjct: 1600 EIPKEEDKDKRDEEKPASPTD 1620



>EAY07488.1 on XP_829793  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 493

 Score = 24.6 bits (52), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 9/100 (9%)

Query: 2   KYVAAYLLAIAGGNATPSA--ADVKAILESVGAAVDEQKLNHVIAKFEGKNIEELIEEGA 59
           K+  A L A    N+ P++   D K     +G   + ++LN ++  +E + ++EL  +G 
Sbjct: 336 KHDLAKLWATIDSNSIPNSLFTDQKDGNTELGKIKELRQLNLILTHYERQRVQELAAKGK 395

Query: 60  KKMISTGAAVAAAPA-------AGAAGAAAEEAPKEEAKE 92
           +   +T  +    P+         AAG   E   K + KE
Sbjct: 396 ELQKATENSKCKVPSVQDKEKVCNAAGDDQEACEKLKDKE 435



>EAY07488.1 on XP_812794   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 936

 Score = 24.6 bits (52), Expect = 1.6,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 2/49 (4%)

Query: 56  EEGAKKMISTGAAVAAAPAAGAA--GAAAEEAPKEEAKEEEPAAPLDLG 102
           EE  + ++S+GA V +AP   +A   +  EE+  +   EE      ++G
Sbjct: 810 EEQRQSLVSSGAGVVSAPTVSSATISSVGEESVMQVVSEESSDGHKNVG 858



>EAY07488.1 on XP_803398  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 473

 Score = 24.3 bits (51), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 12/36 (33%), Positives = 19/36 (52%)

Query: 18 PSAADVKAILESVGAAVDEQKLNHVIAKFEGKNIEE 53
          P+ A+  A  E +    DE K NH +A+   KN+ +
Sbjct: 33 PTEAENSAAAEGIKTRRDELKFNHALAEALRKNVRQ 68



>EAY07488.1 on XP_806668   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 779

 Score = 24.3 bits (51), Expect = 1.9,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 15/37 (40%)

Query: 62 MISTGAAVAAAPAAGAAGAAAEEAPKEEAKEEEPAAP 98
          M+S  AAV A       G       + E KE EP  P
Sbjct: 1  MLSRVAAVKAPRTHNRRGMTGSSGRRREGKESEPQRP 37



>EAY07488.1 on XP_806132   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 754

 Score = 24.3 bits (51), Expect = 2.0,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 18/46 (39%)

Query: 62  MISTGAAVAAAPAAGAAGAAAEEAPKEEAKEEEPAAPLDLGDMFDF 107
           M+S  AAV A               + E +E EP  P    D+F F
Sbjct: 1   MLSRVAAVKAPRTDNRRRVTGSSGGRREGRESEPQRPHIFRDVFAF 46



>EAY07488.1 on XP_001611205  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 1146

 Score = 24.3 bits (51), Expect = 2.4,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 15/23 (65%)

Query: 75  AGAAGAAAEEAPKEEAKEEEPAA 97
           AG+AGA     PKE  K+++ A+
Sbjct: 372 AGSAGAKGITTPKEALKKDDSAS 394



>EAY07488.1 on XP_808550   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 948

 Score = 23.9 bits (50), Expect = 2.8,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 16/37 (43%)

Query: 62 MISTGAAVAAAPAAGAAGAAAEEAPKEEAKEEEPAAP 98
          M+S  AAV A       G +     + E +E EP  P
Sbjct: 1  MLSRVAAVKAPRTHNRCGVSGSSGRRREGRESEPQMP 37



>EAY07488.1 on XP_812751   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 952

 Score = 23.9 bits (50), Expect = 3.1,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 15/37 (40%)

Query: 62 MISTGAAVAAAPAAGAAGAAAEEAPKEEAKEEEPAAP 98
          M+S  AAV A       G       + E +E EP  P
Sbjct: 1  MLSRVAAVVAPRTHNRRGVTGSSGRRREGRESEPQRP 37



>EAY07488.1 on XP_821703   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 912

 Score = 23.5 bits (49), Expect = 3.7,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 15/37 (40%)

Query: 62 MISTGAAVAAAPAAGAAGAAAEEAPKEEAKEEEPAAP 98
          M+S  AAV A       G       + E +E EP  P
Sbjct: 62 MLSRVAAVKAPRTHNRRGVTGSSGRRREGRESEPQRP 98



>EAY07488.1 on XP_001351321  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3467

 Score = 23.5 bits (49), Expect = 3.9,   Method: Composition-based stats.
 Identities = 9/18 (50%), Positives = 13/18 (72%)

Query: 44  AKFEGKNIEELIEEGAKK 61
           AK+E KNI+EL ++   K
Sbjct: 884 AKYEAKNIKELYQQNNSK 901



>EAY07488.1 on XP_812793   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 920

 Score = 23.1 bits (48), Expect = 4.6,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%)

Query: 56  EEGAKKMISTGAAVAAAPAAGAA-GAAAEEAPKEEAKEEEPA 96
           EE  + ++S+GA V +AP   +A  ++ EE    +   EE +
Sbjct: 742 EEQGQLLVSSGADVVSAPTVSSAPTSSGEEGSATQVVSEESS 783



>EAY07488.1 on ABA06451  MSA-2a2  (Invasion)  [Babesia bovis]
          Length = 287

 Score = 23.1 bits (48), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 4/49 (8%)

Query: 52  EELIEEGAKKMISTGAAVAAAPAAGAAGAAAEEA----PKEEAKEEEPA 96
           EEL+++   K  S  ++  A P A  A     E+    P++E  E  P+
Sbjct: 194 EELLKKMPSKTPSPTSSPQATPGAKPAAPNTSESAGGQPQQETPENRPS 242



>EAY07488.1 on AAL15423  MSA-2b  (Invasion)  [Babesia bovis]
          Length = 287

 Score = 23.1 bits (48), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 4/49 (8%)

Query: 52  EELIEEGAKKMISTGAAVAAAPAAGAAGAAAEEA----PKEEAKEEEPA 96
           EEL+++   K  S  ++  A P A  A     E+    P++E  E  P+
Sbjct: 194 EELLKKMPSKTPSPTSSPQATPGAKPAAPNTSESAGGQPQQETPENRPS 242



>EAY07488.1 on XP_821294   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 776

 Score = 23.1 bits (48), Expect = 4.7,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 15/37 (40%)

Query: 62 MISTGAAVAAAPAAGAAGAAAEEAPKEEAKEEEPAAP 98
          M+S  AAV A       G       + E +E EP  P
Sbjct: 1  MLSRVAAVKAPRTHNRRGVTGSSGRRREGRESEPQRP 37



>EAY07488.1 on XP_819384   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 737

 Score = 23.1 bits (48), Expect = 5.6,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 15/37 (40%)

Query: 62 MISTGAAVAAAPAAGAAGAAAEEAPKEEAKEEEPAAP 98
          M+S  AAV A  A            + E +E EP  P
Sbjct: 1  MLSRVAAVKAPRAHNRRRGTGSSGRRREGRESEPQRP 37



>EAY07488.1 on XP_808182   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 918

 Score = 23.1 bits (48), Expect = 5.7,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 14/37 (37%)

Query: 62 MISTGAAVAAAPAAGAAGAAAEEAPKEEAKEEEPAAP 98
          M+S  AAV A       G       + E  E EP  P
Sbjct: 1  MLSRAAAVKAPRTHNRRGVTGSSGRRREGGESEPQRP 37



>EAY07488.1 on XP_807842   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1043

 Score = 23.1 bits (48), Expect = 5.8,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 15/37 (40%)

Query: 62 MISTGAAVAAAPAAGAAGAAAEEAPKEEAKEEEPAAP 98
          M+S  AAV A       G       + E +E EP  P
Sbjct: 1  MLSRVAAVKAPRTHNRRGVTGSSGRRREGRESEPQRP 37



>EAY07488.1 on XP_809739   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1043

 Score = 23.1 bits (48), Expect = 5.8,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 15/37 (40%)

Query: 62 MISTGAAVAAAPAAGAAGAAAEEAPKEEAKEEEPAAP 98
          M+S  AAV A       G       + E +E EP  P
Sbjct: 1  MLSRVAAVKAPRTHNRRGVTGSSGRRREGRESEPQRP 37



>EAY07488.1 on XP_804688   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 704

 Score = 22.7 bits (47), Expect = 7.1,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 15/37 (40%)

Query: 62 MISTGAAVAAAPAAGAAGAAAEEAPKEEAKEEEPAAP 98
          M+S  AAV A         A     + E +E EP  P
Sbjct: 1  MLSRVAAVKAPRTHNRRRVAGSSGRRREGRESEPQRP 37



>EAY07488.1 on XP_810237   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 922

 Score = 22.7 bits (47), Expect = 7.8,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 18/46 (39%)

Query: 62  MISTGAAVAAAPAAGAAGAAAEEAPKEEAKEEEPAAPLDLGDMFDF 107
           M+S  AAV A               + E +E EP  P    D+F F
Sbjct: 1   MLSRVAAVMAPRTHNRRRVTGSSGRRREGRESEPPRPNMSRDLFHF 46



>EAY07488.1 on XP_811677   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 935

 Score = 22.7 bits (47), Expect = 7.8,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 15/37 (40%)

Query: 62 MISTGAAVAAAPAAGAAGAAAEEAPKEEAKEEEPAAP 98
          M+S  AAV A       G       + E +E EP  P
Sbjct: 1  MLSRVAAVKAPRTHNRRGVTGSSGRRREGRESEPQRP 37



>EAY07488.1 on XP_812792   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 879

 Score = 22.3 bits (46), Expect = 7.9,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 18/46 (39%)

Query: 62  MISTGAAVAAAPAAGAAGAAAEEAPKEEAKEEEPAAPLDLGDMFDF 107
           M+S  AAV A       G       ++E  E EP  P     +F F
Sbjct: 1   MLSRVAAVEAPRTHNRRGVTGSSGRRKEGGESEPQGPNISRHLFHF 46



>EAY07488.1 on XP_818403   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 957

 Score = 22.3 bits (46), Expect = 8.0,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 14/37 (37%)

Query: 62 MISTGAAVAAAPAAGAAGAAAEEAPKEEAKEEEPAAP 98
          M+S  AAV A       G       + E  E EP  P
Sbjct: 1  MLSRAAAVKAPRTHNRRGVTGSSGRRREGGESEPQRP 37



>EAY07488.1 on XP_812339   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 949

 Score = 22.3 bits (46), Expect = 9.4,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 18/44 (40%)

Query: 62  MISTGAAVAAAPAAGAAGAAAEEAPKEEAKEEEPAAPLDLGDMF 105
           M+S  AAV A        A      + E +E EP  P    D+F
Sbjct: 1   MLSRVAAVKAPRTHNRRRATGSSGRRREGRESEPQRPNMSRDLF 44




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07503.1 Clan SC, family S33, methylesterase-like
serine peptidase [Trichomonas vaginalis G3]
         (318 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_829762  VSG  (Establishment)  [Trypanosoma brucei]                  27   1.8  

>EAY07503.1 on XP_829762  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 503

 Score = 26.9 bits (58), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 100 KFPNCKIVINGYSFGTFLATRAFRLI 125
           K P+CK  IN   + +FL  + F LI
Sbjct: 469 KSPDCKWEINACKYSSFLVNKKFNLI 494




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07509.1 CAMK family protein kinase [Trichomonas
vaginalis G3]
         (219 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    57   8e-11
XP_821991   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   4.5  

>EAY07509.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 57.4 bits (137), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 3/109 (2%)

Query: 18  PTDDMETKIKYVHEIIEAINYMHERSFAHCDIKPSNILIDQFGR-AKLADFGLTHFVGSS 76
           PT  ++    Y++++++A+NY H +   H DIKP N++ID   +  +L D+GL  F    
Sbjct: 142 PTLTIQDIKYYIYQLLKAMNYCHSQGIMHRDIKPHNVMIDHEKKILRLIDWGLAEFYHPE 201

Query: 77  GQDAKITYSGSFSYMSPELLKYRKCDPFKADVWAFGVTLYTLFGKHHPF 125
            Q+  +  +  + Y  PELL   +   +  D+W+ G  L  +  K  PF
Sbjct: 202 -QEYSVRVATRY-YKGPELLVDMRYYDYSLDIWSIGCMLAGIIFKKEPF 248



>EAY07509.1 on XP_821991   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 882

 Score = 25.0 bits (53), Expect = 4.5,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 27/57 (47%)

Query: 99  RKCDPFKADVWAFGVTLYTLFGKHHPFRGKTMETIICQMQAGIIPLKNIPHDLGNII 155
           +K D  +      G  +Y L GKH      T +T   ++++GI+ +K    + GN I
Sbjct: 162 KKVDVSRPTTVVEGSNIYMLVGKHSHEAADTCQTETEKIKSGILLVKGEVSEGGNKI 218




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07513.1 PH domain containing protein [Trichomonas
vaginalis G3]
         (285 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001348176  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   7.0  
XP_001349437  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   7.8  

>EAY07513.1 on XP_001348176  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3119

 Score = 25.0 bits (53), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 14/87 (16%), Positives = 43/87 (49%), Gaps = 1/87 (1%)

Query: 104  TKNQWYKDNFKKIFNDYIC-ITELIWSHNSANIQQIVGRLHGLIQQGLYTRNEILEIITY 162
            ++ +W+K   + I+   +C ++  + + +  ++Q+ +   +   +    +++    I   
Sbjct: 2072 SRQEWWKKYAEDIWKGMVCALSHSVSASDKDSMQKNLTDKYKYKEVKFTSKSSKHNIPLS 2131

Query: 163  AAEKRPREVKFFGDLTDTFLHSEGYKI 189
              EK+P+ +++F + T+ F     YK+
Sbjct: 2132 EFEKKPQFIRWFEEWTEDFCRKRTYKL 2158



>EAY07513.1 on XP_001349437  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2231

 Score = 24.6 bits (52), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 12/74 (16%)

Query: 105  KNQWYKDNFKKIFNDYICITELIWSHNSANIQQIVGRLHGLIQQGLYTRNEILEIITYAA 164
            + +W+K+N K I++  IC   L +  N+A+     G  H L Q        + E +    
Sbjct: 1114 RKEWWKENAKHIWHGMICA--LTYDTNTAS-----GDKHTLKQN-----KSLKEALWDEQ 1161

Query: 165  EKRPREVKFFGDLT 178
            +K+P++     D T
Sbjct: 1162 KKKPKKTDNGSDYT 1175




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07514.1 coronin, putative [Trichomonas vaginalis G3]
         (436 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_821154   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   4.9  

>EAY07514.1 on XP_821154   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 951

 Score = 26.2 bits (56), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 16/44 (36%), Positives = 21/44 (47%)

Query: 51  GGLFAVLPANGYGKVGTTNSVFRGHTGGVLDVDFNPFNDNIIAS 94
           G +FAV  A   GK G     F G   G+L +D    N+ + AS
Sbjct: 106 GKVFAVAEAQCTGKNGAGEGSFTGIASGLLTLDKRQTNEELDAS 149




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07520.1 hypothetical protein TVAG_124930 [Trichomonas
vaginalis G3]
         (182 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07522.1 hypothetical protein TVAG_124950 [Trichomonas
vaginalis G3]
         (103 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_822021   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   8.7  

>EAY07522.1 on XP_822021   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 872

 Score = 22.3 bits (46), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 1/31 (3%)

Query: 37  FQDSLTKENVTDLRNSTMSKLSEGHSSEKGS 67
            Q  + + N T L NS++ KLS+G++S+ G+
Sbjct: 822 VQPQVREVNATAL-NSSLGKLSQGNNSDAGT 851




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07523.1 Tubulin-tyrosine ligase family protein
[Trichomonas vaginalis G3]
         (464 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001352240  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   3.9  
XP_001610568  variant erythrocyte surface antigen-1, alpha subun...    26   4.5  
XP_806239   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   4.9  

>EAY07523.1 on XP_001352240  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 1315

 Score = 26.6 bits (57), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 14/83 (16%)

Query: 117 DNGALGQGIVVINPSDQYQVTN---------HLSVAQEYKNSYLIDGYKFDLRIYCLVIA 167
           D G + +GI +  P+DQ +V N         H +++ E KN+Y  DG     ++      
Sbjct: 184 DIGDIVRGIDMFKPNDQDEVWNGLRSVFKKIHDNLSSEVKNAYPDDGSGNYFKLREDWWT 243

Query: 168 AEKPEIYVYHDGIARFCSAPANS 190
           A + +++      A  C AP N+
Sbjct: 244 ANRDQVWK-----AMTCVAPENA 261



>EAY07523.1 on XP_001610568  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1329

 Score = 26.2 bits (56), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 51/122 (41%), Gaps = 5/122 (4%)

Query: 340  SWKIYISKHKNIGEDSLNKR-QNAERNTKFVHVFPNPS--PERSQWNAVYELSMSLPSEI 396
            SW +Y+S   + G +SL++  Q  E         PN     E  Q N +     S+ S  
Sbjct: 1123 SWVLYLSDALHSGLESLSEAFQQIECRGCKGQCDPNKCKKGEHGQGNGLCGC-QSIVSCT 1181

Query: 397  GNCWNLPREIPSTYKPIMINCQQQQSERSPHSSSENTPKDKKVNSIIHS-KKIIQPKVKS 455
            G    L R   S   P  +   QQ+ E     S ENT   K+ +  + S  K+++ K  +
Sbjct: 1182 GVLPVLYRHGFSYGNPFNLEGYQQKEEEKGDYSIENTKTTKRCHEFLDSLNKVLEDKQAT 1241

Query: 456  NQ 457
            +Q
Sbjct: 1242 SQ 1243



>EAY07523.1 on XP_806239   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 475

 Score = 26.2 bits (56), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)

Query: 211 AESITHIVSDVFADLKRKGANIDKLWLDIENAMALTVLSAAPFIMNGSR 259
           A S+T+  S   AD KR+   ++K   D+++      LS AP   NG +
Sbjct: 223 AASVTYSDSHAVADTKRREEQMEKAATDVDDLPP--PLSPAPEAANGHK 269




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07526.1 hypothetical protein TVAG_124990 [Trichomonas
vaginalis G3]
         (550 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_806401   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   1.7  
XP_001349740  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   4.4  
XP_821102   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   4.4  
XP_829762  VSG  (Establishment)  [Trypanosoma brucei]                  26   6.1  

>EAY07526.1 on XP_806401   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 863

 Score = 28.1 bits (61), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 4/32 (12%)

Query: 517 YGLMLMRGEGVEQDADEAAKYLKLCTNKVYGI 548
           +GL+L++GE     +DE  K  ++C N  YG+
Sbjct: 274 WGLLLVKGE----LSDEGGKDKRICWNDTYGL 301



>EAY07526.1 on XP_001349740  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3346

 Score = 26.6 bits (57), Expect = 4.4,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 38/93 (40%), Gaps = 2/93 (2%)

Query: 25   KDNANKIREMAEKEDSAAWNNMAILLINGRYFKKDVKKALELLIKSQKLNNPFATFNLGA 84
            K    KI+E  E+    A N+      +G  + KD K  +  L K  + N     +   A
Sbjct: 2618 KQQWTKIKEKYEELYKKAQNSDTS--NSGTTYPKDEKDVVSFLSKLHEKNKDNKIYYTAA 2675

Query: 85   LYLAGEEVKTDLFAATHYFDIASQQGLPEAQNN 117
             Y+  +    D    TH+ D  + + LP  ++N
Sbjct: 2676 GYIHQQAKYLDCTQQTHFCDKKNGETLPSGRDN 2708



>EAY07526.1 on XP_821102   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 929

 Score = 26.6 bits (57), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 3/43 (6%)

Query: 125 GKGVTQNADKAVKLYNNAYKE---GCIYAGYGLGIAAKHGLFM 164
           G G+T N   AV   NN Y       + +G G GI  K G  M
Sbjct: 176 GNGITWNETHAVTFENNEYAAKFLTQLVSGGGSGIKTKDGTLM 218



>EAY07526.1 on XP_829762  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 503

 Score = 26.2 bits (56), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 16/46 (34%), Positives = 26/46 (56%)

Query: 458 DREAREYFARAAELGEVKAMLALGKLLREGGVGVPPDLEEAAEWMK 503
           D++ +E F + ++  EVK   A   +  EG   +  DL++AAE MK
Sbjct: 70  DQQWQEKFYKKSDKKEVKNTAAEAGITGEGAADMWADLKKAAEAMK 115




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07528.1 EF hand family protein [Trichomonas vaginalis
G3]
         (77 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_814927   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   1.4  
XP_814930   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   1.6  
XP_001608668  variant erythrocyte surface antigen-1, alpha subun...    23   3.3  
XP_803984   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   3.6  
XP_815173   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   4.5  
XP_817493   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   4.6  
XP_814919   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   4.8  
XP_821677   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   7.8  

>EAY07528.1 on XP_814927   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 759

 Score = 23.9 bits (50), Expect = 1.4,   Method: Composition-based stats.
 Identities = 9/20 (45%), Positives = 13/20 (65%)

Query: 49  VDIDAAFKEMDVNGDGLIGF 68
           V +DA+F E  +   GL+GF
Sbjct: 478 VQLDASFSESSIPTAGLVGF 497



>EAY07528.1 on XP_814930   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 938

 Score = 23.5 bits (49), Expect = 1.6,   Method: Composition-based stats.
 Identities = 9/20 (45%), Positives = 13/20 (65%)

Query: 49  VDIDAAFKEMDVNGDGLIGF 68
           V +DA+F E  +   GL+GF
Sbjct: 542 VQLDASFSESSIPTAGLVGF 561



>EAY07528.1 on XP_001608668  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1337

 Score = 22.7 bits (47), Expect = 3.3,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 21/31 (67%)

Query: 5   DKLAEDPLYLFKRIFLKIDKDKNKKLDKEEV 35
           DK+ ED + L  ++ + ++ +K+++ D EE+
Sbjct: 657 DKVKEDLVGLVNKVKVGLEGNKDEEADGEEL 687



>EAY07528.1 on XP_803984   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 794

 Score = 22.7 bits (47), Expect = 3.6,   Method: Composition-based stats.
 Identities = 8/20 (40%), Positives = 13/20 (65%)

Query: 49  VDIDAAFKEMDVNGDGLIGF 68
           V +D++F E  +   GL+GF
Sbjct: 476 VQLDSSFSESSIPTAGLVGF 495



>EAY07528.1 on XP_815173   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 661

 Score = 22.3 bits (46), Expect = 4.5,   Method: Composition-based stats.
 Identities = 8/18 (44%), Positives = 12/18 (66%)

Query: 51  IDAAFKEMDVNGDGLIGF 68
           +DA+F E  +   GL+GF
Sbjct: 480 LDASFSESSIPTAGLVGF 497



>EAY07528.1 on XP_817493   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 765

 Score = 22.3 bits (46), Expect = 4.6,   Method: Composition-based stats.
 Identities = 8/18 (44%), Positives = 12/18 (66%)

Query: 51  IDAAFKEMDVNGDGLIGF 68
           +DA+F E  +   GL+GF
Sbjct: 479 LDASFSESSIPTAGLVGF 496



>EAY07528.1 on XP_814919   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 854

 Score = 22.3 bits (46), Expect = 4.8,   Method: Composition-based stats.
 Identities = 8/18 (44%), Positives = 12/18 (66%)

Query: 51  IDAAFKEMDVNGDGLIGF 68
           +DA+F E  +   GL+GF
Sbjct: 545 LDASFSESSIPTAGLVGF 562



>EAY07528.1 on XP_821677   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 861

 Score = 21.6 bits (44), Expect = 7.8,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 27  NKKLDKEEVSQFMALFAGDLGEVDIDAAFKEMD 59
           N +   E +   M L  G+LGE D    +K  D
Sbjct: 190 NCQAGTENIKSGMLLVKGELGEADKKIDWKTTD 222




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07535.1 hypothetical protein TVAG_125080 [Trichomonas
vaginalis G3]
         (376 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001350410  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   7.6  

>EAY07535.1 on XP_001350410  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2178

 Score = 25.4 bits (54), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 8/88 (9%)

Query: 119  IEVVIVEYNNNSTKGLSEVLKIGKNLHGKTK---IVKVSHQNHLELQKLNNFKEDFDSN- 174
            IEVV+    NN+T   +     GKN    T+       +  N L   + N  K++F SN 
Sbjct: 1785 IEVVLEPSGNNTTASGNNTTASGKNTPSDTQNDIPSGDTPNNKLTDNEWNTLKDEFISNM 1844

Query: 175  ----QAKTIGIMKSSGKFVLVTNPDIIL 198
                Q K +    SSG     T P  + 
Sbjct: 1845 LQSEQPKDVPNDYSSGDIPFNTQPSTLY 1872




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07538.1 hypothetical protein TVAG_125110 [Trichomonas
vaginalis G3]
         (423 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001350796  PfEMP1  (Establishment)  [Plasmodium falciparum]         30   0.40 

>EAY07538.1 on XP_001350796  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2646

 Score = 29.6 bits (65), Expect = 0.40,   Method: Composition-based stats.
 Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 11/107 (10%)

Query: 304  NIHPSGSPY-LNAKKIITSVHDVELEPGSAQFQLINSRTVRCLLDASKEKHLQNNF---V 359
            N HP+ S + L+ K  ITS+HD  L  G      +N  T          K++ NN    +
Sbjct: 2375 NTHPTPSRHTLDQKPFITSIHDRNLYTGEEYNYNVNMSTN----SMDDTKYVSNNVYSGI 2430

Query: 360  ALLSCFTNSGIIFPATQFVDEFPLRK-NQVLRSQSVQFTKTHQNFKS 405
             L++   NSG         DE   RK N++  +   + T TH   KS
Sbjct: 2431 DLINDSLNSG--NQPIDIYDELLKRKENELFGTNHPKHTNTHNVTKS 2475




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07540.1 hypothetical protein TVAG_125130 [Trichomonas
vaginalis G3]
         (380 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609101  variant erythrocyte surface antigen-1, alpha subun...    28   1.2  
XP_001351437  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   1.6  
XP_843744  VSG  (Establishment)  [Trypanosoma brucei]                  27   2.2  
XP_843745  VSG  (Establishment)  [Trypanosoma brucei]                  26   5.0  

>EAY07540.1 on XP_001609101  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1359

 Score = 27.7 bits (60), Expect = 1.2,   Method: Composition-based stats.
 Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 4/139 (2%)

Query: 193 LLDELTELRLQRSSLMKDLDKLKSQ-NAELTTLEKSQLENIADYNAKLQ-ILQDDIKITE 250
           LL+++ E+ +Q  +  ++L+K     N  L  ++K    N +D    L+ +L   + + E
Sbjct: 668 LLEKIGEVVVQLGNAQEELEKSGGNVNIALAAVKKVSGVNGSDLKGVLEKVLDVVLGVVE 727

Query: 251 RDTTEVRKNLISLEEKLEKTNTSTKDLENTHNQLLQKIEAMKQKKLEAEQRLSVAQSQLS 310
           +    V++ + +LEE ++KT  + K+      +  + +EA K +   A+  L+ A+    
Sbjct: 728 KLVEGVKEKVKALEE-IKKTLEAAKEKLEEAKKTQEALEAAKGELEGAKGALTTAKKAFP 786

Query: 311 ESEKKLIEVDRNITSLERD 329
            S    I+  +NI S   D
Sbjct: 787 GSSSD-IDPCKNIVSATID 804



>EAY07540.1 on XP_001351437  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2277

 Score = 27.3 bits (59), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)

Query: 285  LQKIEAMKQKKLEAEQRLSVA-QSQLSESEKKLIEVDRNITSLERDKSNNIQKLQSMTER 343
            ++K E  KQ+K   EQR +   ++++SES     E   N+ +   D +N +Q+L+    +
Sbjct: 1350 IKKDEYEKQQKAYNEQRTNYTNKNKVSESNNHDKEFCTNLETKYTDAANFLQRLKDGPCK 1409

Query: 344  QNKVEDK 350
             N  ED+
Sbjct: 1410 NNSEEDQ 1416



>EAY07540.1 on XP_843744  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 366

 Score = 26.9 bits (58), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 7/74 (9%)

Query: 248 ITERDTTEVRKNLISLEEKLEKTNTSTK------DLENTHNQLLQKIEAMKQK-KLEAEQ 300
           ++ER+  E+RK ++S+ +  +    + +      DLE   N+ L  +    Q+ K  +  
Sbjct: 114 LSEREVVEIRKKVLSVAQIFQNITKNRRWVLKASDLEKGINRALYGVPYRPQEIKARSSD 173

Query: 301 RLSVAQSQLSESEK 314
           R  V + QLS S+K
Sbjct: 174 RRQVCEQQLSRSQK 187



>EAY07540.1 on XP_843745  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 366

 Score = 25.8 bits (55), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 7/74 (9%)

Query: 248 ITERDTTEVRKNLISLEEKLEKTNTSTK------DLENTHNQLLQKIEAMKQK-KLEAEQ 300
           ++ER+  E+RK ++S+ +  +    + +      DLE   N+ L  +    Q+ K  +  
Sbjct: 114 LSEREVVEIRKKVLSVAQIFQNITKNRRWVLKASDLEKGINRALYGVPYRPQEIKARSSD 173

Query: 301 RLSVAQSQLSESEK 314
           R  V + QLS S+K
Sbjct: 174 RRQVCEQQLSRSQK 187




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07546.1 Leucine Rich Repeat family protein
[Trichomonas vaginalis G3]
         (284 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001710242  CWP2  (Others)  [Giardia duodenalis]                     25   3.2  

>EAY07546.1 on XP_001710242  CWP2  (Others)  [Giardia duodenalis]
          Length = 255

 Score = 25.4 bits (54), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 4  IVLDRLGITSIEPDQLKLFPNLTVLYITHNKLK 36
          I L  +G+T   P  +  FP L  LY+ +N L 
Sbjct: 66 IDLSDMGLTGALPADIGCFPLLRSLYLNNNDLA 98




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07547.1 Dynein heavy chain family protein
[Trichomonas vaginalis G3]
         (3921 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_819146   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   9.6  

>EAY07547.1 on XP_819146   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 825

 Score = 28.5 bits (62), Expect = 9.6,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 24/43 (55%)

Query: 1225 SSDNVQKAITTLKDSINNKKVDLINIFEMKTDYFSRGMISMVI 1267
            S D+V  +    K   NN + +LI ++E K    S GM+S+++
Sbjct: 402  SDDDVAASSLLYKSGNNNDEEELITLYEKKKGESSSGMVSVLL 444




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07548.1 hypothetical protein TVAG_211870 [Trichomonas
vaginalis G3]
         (175 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_807358   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   0.57 
XP_811678   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   2.9  
XP_811897   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   3.0  
XP_843643  VSG  (Establishment)  [Trypanosoma brucei]                  25   4.0  
XP_803151   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   4.2  

>EAY07548.1 on XP_807358   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 872

 Score = 27.3 bits (59), Expect = 0.57,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 21/37 (56%)

Query: 45  EGLSEKKAKQKKRNILLAATERGNLRLVKSLIEGGCN 81
           EG +EK  K K  +++L   +  N +L K + + GC+
Sbjct: 348 EGDAEKDGKNKNVSLILYKLDDANWKLSKGMSDDGCS 384



>EAY07548.1 on XP_811678   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 926

 Score = 25.0 bits (53), Expect = 2.9,   Method: Composition-based stats.
 Identities = 9/23 (39%), Positives = 17/23 (73%)

Query: 59  ILLAATERGNLRLVKSLIEGGCN 81
           I+ ++T+  NL+L K + +GGC+
Sbjct: 276 IIYSSTDNKNLKLSKGMSDGGCS 298



>EAY07548.1 on XP_811897   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 879

 Score = 25.0 bits (53), Expect = 3.0,   Method: Composition-based stats.
 Identities = 9/23 (39%), Positives = 17/23 (73%)

Query: 59  ILLAATERGNLRLVKSLIEGGCN 81
           I+ ++T+  NL+L K + +GGC+
Sbjct: 281 IIYSSTDNKNLKLSKGMSDGGCS 303



>EAY07548.1 on XP_843643  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 516

 Score = 24.6 bits (52), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 12/33 (36%), Positives = 20/33 (60%)

Query: 81  NKEATDIFGSTALFYAASEGFLEIAKYLISINA 113
           NKE T++  +      ASEG   I+ YL++I++
Sbjct: 113 NKEQTNLQTAVTAVGFASEGAAAISSYLMTIDS 145



>EAY07548.1 on XP_803151   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 755

 Score = 24.6 bits (52), Expect = 4.2,   Method: Composition-based stats.
 Identities = 12/22 (54%), Positives = 14/22 (63%)

Query: 145 LGVNKEEKNYDGKTALQLAAPK 166
           LGVN   KN DG +A  LA+ K
Sbjct: 408 LGVNATVKNNDGTSAAALASTK 429




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07552.1 hypothetical protein TVAG_211910 [Trichomonas
vaginalis G3]
         (660 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_966305  PfEMP1  (Establishment)  [Plasmodium falciparum]            31   0.21 
XP_001350410  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   3.8  
XP_001352240  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   7.3  

>EAY07552.1 on XP_966305  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3954

 Score = 31.2 bits (69), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 62/178 (34%), Gaps = 12/178 (6%)

Query: 417 PDQIRQAFNILRTYLSLIANNTLSIYQFISEIFLKDF-LYSILLDIKKFAPTVQHPEYFP 475
           PDQI    N+L   L        SI Q        D+  Y    D             F 
Sbjct: 134 PDQITSTHNLLVDVLLAAKYEGQSITQ--------DYPKYQATYDDSPSKMCTMLARSFA 185

Query: 476 PLARLLYVIFSFGNLDGEFAPLEKLEKRLFKKLYPLLLEFAITISDHPDNEVDWIAPKAD 535
            +  ++     F   + E  PLE+  K +FKK+Y  L    I   +H ++  D+   + D
Sbjct: 186 DIGDIVRGKDLFLGTNEEKKPLEENLKEIFKKIYENL---GIQEKNHYNDTPDYYKLRED 242

Query: 536 PLARAIEDIAKAITYNPQKFSMCLQDVYTVDHGQSLLGSNYAGMLIQYFIHLYDSTPV 593
                 + + KAIT N   +S   +     +   S L SN      +   H  D  P 
Sbjct: 243 WWIANRDQVWKAITCNAGGYSYFRKTCGGDNEKNSTLASNKCRCKDEKGEHDTDQVPT 300



>EAY07552.1 on XP_001350410  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2178

 Score = 27.3 bits (59), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 5/63 (7%)

Query: 492 GEFAPLEKLEKRL---FKKLYPLLLEFAI--TISDHPDNEVDWIAPKADPLARAIEDIAK 546
           G     +KLEK+L   FKK+Y  L+E       +D+ D+  D+   + D  A   +D+ K
Sbjct: 204 GNNRENDKLEKKLKGYFKKIYDNLVEKKKEEAETDYKDDAPDFYQLREDWWALNRQDVWK 263

Query: 547 AIT 549
           AIT
Sbjct: 264 AIT 266



>EAY07552.1 on XP_001352240  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 1315

 Score = 26.2 bits (56), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 6/60 (10%)

Query: 198 IFTFKGNDQQEVFNVKPHKFQVGKDQISIEVMN---DKGKALWKFIPED---PAQIQLWE 251
           I  FK NDQ EV+N     F+   D +S EV N   D G   +  + ED     + Q+W+
Sbjct: 192 IDMFKPNDQDEVWNGLRSVFKKIHDNLSSEVKNAYPDDGSGNYFKLREDWWTANRDQVWK 251




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07559.1 hypothetical protein TVAG_211980 [Trichomonas
vaginalis G3]
         (550 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351563  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   4.3  

>EAY07559.1 on XP_001351563  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2149

 Score = 26.6 bits (57), Expect = 4.3,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 144  IPQSTKLTDKNYELLYGMVMRNIVRRLPTIDPLALENYDVSPFTEPSWPHLSI 196
            IP + K TD  +  L    + N+++  P  +P  L + +V   T P   H+S+
Sbjct: 1838 IPHTNKFTDDEWNTLKHDFISNMLQNEPNTEPNILRD-NVDNNTNPKTLHVSM 1889




 Score = 26.2 bits (56), Expect = 6.7,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 3/34 (8%)

Query: 31   EIPPPQLPSNQEEENTNKIEENHLSLYDSPIADI 64
            E PPP++P   +EE+ +K +E   +   SP  D+
Sbjct: 1592 EAPPPKVPEIPKEEDKDKRDEEKPA---SPTDDV 1622




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07561.1 hypothetical protein TVAG_212000 [Trichomonas
vaginalis G3]
         (116 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001610908  RAP-1  (Adhesin)  [Babesia bovis]                        24   3.4  

>EAY07561.1 on XP_001610908  RAP-1  (Adhesin)  [Babesia bovis]
          Length = 565

 Score = 23.9 bits (50), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 7/15 (46%), Positives = 13/15 (86%)

Query: 64  TQRFSDMIRRVYLGS 78
            +R++DM+++V LGS
Sbjct: 275 ARRYADMVKKVLLGS 289




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07570.1 hypothetical protein TVAG_212090 [Trichomonas
vaginalis G3]
         (134 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_810072   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   0.94 
XP_806338   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   1.2  
XP_812043   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   1.3  
XP_804885   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   1.5  
XP_819383   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   2.2  
AAX07981  alpha-11 giardin  (Others)  [Giardia duodenalis]             23   5.1  

>EAY07570.1 on XP_810072   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 731

 Score = 25.8 bits (55), Expect = 0.94,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)

Query: 6   SEFFLKKGFVVERVIARGGNSVVYC--VYSNREQTRYALKK 44
           S   ++ G +V  ++A+ GN VVY   +YS    + +AL K
Sbjct: 270 SGVLMEDGTLVFPLMAKSGNGVVYSMIIYSTDNGSNWALSK 310



>EAY07570.1 on XP_806338   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 652

 Score = 25.4 bits (54), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)

Query: 6   SEFFLKKGFVVERVIARGGNSVVYC--VYSNREQTRYALKK 44
           S   ++ G +V  ++AR GN VVY   +YS    + + L K
Sbjct: 286 SGVLMEDGTLVFPLMARSGNGVVYSMIIYSKDNGSNWVLSK 326



>EAY07570.1 on XP_812043   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 807

 Score = 25.4 bits (54), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)

Query: 6   SEFFLKKGFVVERVIARGGNSVVYC--VYSNREQTRYALKK 44
           S   ++ G +V  ++AR GN VVY   +YS    + + L K
Sbjct: 286 SGVLMEDGTLVFPLMARSGNGVVYSMIIYSKDNGSNWVLSK 326



>EAY07570.1 on XP_804885   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 446

 Score = 25.0 bits (53), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 2/38 (5%)

Query: 9   FLKKGFVVERVIARGGNSVVYC--VYSNREQTRYALKK 44
            ++ G +V  ++A+ GN VVY   +YS    + +AL K
Sbjct: 276 LMEDGTLVFPLMAKSGNGVVYSMIIYSTDNGSTWALSK 313



>EAY07570.1 on XP_819383   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 753

 Score = 24.6 bits (52), Expect = 2.2,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 9   FLKKGFVVERVIARGGNSVVYC--VYSNREQTRYAL 42
            ++ G +V  ++A+ GN VVY   +YS    + +AL
Sbjct: 290 LMEDGTIVFSLMAKSGNDVVYSMIIYSTDSGSTWAL 325



>EAY07570.1 on AAX07981  alpha-11 giardin  (Others)  [Giardia duodenalis]
          Length = 255

 Score = 23.5 bits (49), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 8/20 (40%), Positives = 15/20 (75%)

Query: 97  KEEISNDLLRKYINEVVLLS 116
           KE+  NDLL+ +++++ L S
Sbjct: 114 KEKTGNDLLQDFVDQIPLTS 133




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07571.1 CAMK family protein kinase [Trichomonas
vaginalis G3]
         (322 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    73   1e-15

>EAY07571.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 73.2 bits (178), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 110/211 (52%), Gaps = 21/211 (9%)

Query: 6   VARQYKPLHLIGLGAFAKVYLAVDTRTLEKCAVKVIPKINPEDRTDQTKRIKNEIEIHKV 65
           V   Y+ +  IG G F++V+  ++T T +KC +K++  +  +    + K ++N      +
Sbjct: 51  VPDSYEIVRKIGRGKFSEVFEGLNTVTKDKCVIKILKPVKKKKIKREIKILQN------L 104

Query: 66  LRHPFIVQLYDVIETPENFY--LIMEYVDGCSLIDDVNTNGLYTESEAANI---FAQIII 120
              P I++L D+++ P++    LI E+V+            LY      +I     Q++ 
Sbjct: 105 RGGPNIIKLLDIVKDPQSRTPSLIFEHVNNTDF------KTLYPTLTIQDIKYYIYQLLK 158

Query: 121 ALEYLHSKHNLIHRDLKAENIMITH-NKLVKIIDFGLS-CRSNSKDVSERCGSLSYASPE 178
           A+ Y HS+  ++HRD+K  N+MI H  K++++ID+GL+      ++ S R  +  Y  PE
Sbjct: 159 AMNYCHSQ-GIMHRDIKPHNVMIDHEKKILRLIDWGLAEFYHPEQEYSVRVATRYYKGPE 217

Query: 179 IVLGKK-YTTSHDIWSCGIVLYAIVCGHIPF 208
           +++  + Y  S DIWS G +L  I+    PF
Sbjct: 218 LLVDMRYYDYSLDIWSIGCMLAGIIFKKEPF 248




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07573.1 Tctex-1 family protein [Trichomonas vaginalis
G3]
         (109 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]                 28   0.13 
XP_965997  PfEMP1  (Establishment)  [Plasmodium falciparum]            23   3.7  
XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 23   5.6  

>EAY07573.1 on XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]
          Length = 2112

 Score = 27.7 bits (60), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 12/28 (42%), Positives = 17/28 (60%)

Query: 2    SATFSDNKEKIGQICEKNVKHVLDGKEY 29
            ++TF+    K   ICE+ V+H LD  EY
Sbjct: 1765 NSTFTSYNNKKSDICEEEVRHYLDKVEY 1792



>EAY07573.1 on XP_965997  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2879

 Score = 23.5 bits (49), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 9/68 (13%)

Query: 18   KNVKHVLDGKEYIGTQIKSWSEEIIRGILQELGKDEFQPFKYL---ANC--LILSQKSNG 72
            K + +  DGK Y+GT +  + +++ +    +L   +    KYL   +NC  L  ++  N 
Sbjct: 2001 KKISNNSDGKAYVGTHVVEFLKKVEKNKCSDLNSAD----KYLYKGSNCKNLTFTENDNE 2056

Query: 73   VHTVTMSL 80
              T T + 
Sbjct: 2057 HRTRTYAF 2064



>EAY07573.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 23.1 bits (48), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 9/47 (19%)

Query: 20  VKHVLDGKEYIG--TQI-----KSWSEEIIRGILQELGKDEFQPFKY 59
           +KH+  GKEYI   TQ      K   +E+I+ I +      F  FKY
Sbjct: 370 LKHIEKGKEYIKRITQANNIADKMKKDELIKKIFE--SSKHFASFKY 414




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07582.1 hypothetical protein TVAG_333940 [Trichomonas
vaginalis G3]
         (608 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001348153  MAEBL  (Adhesin)  [Plasmodium falciparum]                27   3.1  

>EAY07582.1 on XP_001348153  MAEBL  (Adhesin)  [Plasmodium falciparum]
          Length = 2054

 Score = 27.3 bits (59), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 13/38 (34%), Positives = 20/38 (52%)

Query: 336  NATSATATWHPKLALCCVIQNRIVKSCDQSSIIIYDLT 373
            N +S T +   + +LCC I +  +K  D +S   YD T
Sbjct: 1930 NISSGTCSNEERKSLCCSISDFCLKYFDHNSNKYYDCT 1967




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07585.1 hypothetical protein TVAG_333970 [Trichomonas
vaginalis G3]
         (322 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609667  variant erythrocyte surface antigen-1, alpha subun...    32   0.055
XP_001611897  variant erythrocyte surface antigen-1, alpha subun...    26   3.0  
XP_001610497  variant erythrocyte surface antigen-1, alpha subun...    25   6.2  
XP_001610568  variant erythrocyte surface antigen-1, alpha subun...    25   9.2  
XP_001610908  RAP-1  (Adhesin)  [Babesia bovis]                        25   9.6  

>EAY07585.1 on XP_001609667  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1303

 Score = 32.0 bits (71), Expect = 0.055,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 8/115 (6%)

Query: 23  RGGDEFKEAEHLQSDYLQTKREHSKVKKELEE----IQNEYREVNEALTNREEQAVALAS 78
           R G+E K    +Q    + K+   + +KELE      +++ +E  EAL            
Sbjct: 685 RKGEEIK---GVQKKLQEAKKGLEEARKELETGEDLDEDDLKEAKEALGELTNGGGGALH 741

Query: 79  SLGGASATTGENSRLNKEIAKLTVEISNIEEKITEASERTQPVYLAQLERERSQI 133
           +L   S T G   ++    A    E S+ ++KI+E   + Q V L  L+ E  Q+
Sbjct: 742 TLANGSNTAGSLHQVATAGADWQKEYSSAKDKISEVIHKIQEV-LTALQTEVPQV 795



>EAY07585.1 on XP_001611897  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1369

 Score = 26.2 bits (56), Expect = 3.0,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 51/127 (40%)

Query: 27  EFKEAEHLQSDYLQTKREHSKVKKELEEIQNEYREVNEALTNREEQAVALASSLGGASAT 86
           E K  E ++    + K+E  K +  LE+       +   LT  + +  AL  + GG +  
Sbjct: 715 ENKAIEGVKVALGKAKKELEKARTGLEKAVKVNGGLTGKLTEAKNKLDALTKNGGGGALD 774

Query: 87  TGENSRLNKEIAKLTVEISNIEEKITEASERTQPVYLAQLERERSQIYVAVERLTHDLES 146
           T  N      + ++T E     +  + A +R   V    LE   +      E++  ++  
Sbjct: 775 TLANGSHAGSLQQITSEAQKWRKDYSSAKDRISEVIHKVLEVLTTLKEGVKEKIKEEMNG 834

Query: 147 TQKEIHD 153
            +K ++D
Sbjct: 835 HEKALND 841



>EAY07585.1 on XP_001610497  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1315

 Score = 25.4 bits (54), Expect = 6.2,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)

Query: 29  KEA-EHLQSDYLQTKREHSKVKKELEEIQNEYREVNEALTNREEQAVALASSLGGASAT 86
           KEA E +++   + K E  K K+ELE++  +  + ++A++  ++   AL +   GA  T
Sbjct: 692 KEAIEGVKTVLGKAKGELDKAKQELEQVNGKDGQTSQAISKAKKALEALTNGGSGALHT 750



>EAY07585.1 on XP_001610568  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1329

 Score = 24.6 bits (52), Expect = 9.2,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 78/181 (43%), Gaps = 26/181 (14%)

Query: 25  GDEFKEAEHLQSDYLQTKREHSKVKKELEEIQNEYREVNEALTNREEQAVALASSLGGAS 84
           G + +  E ++      K E  K K ELE   N    +N  L   +++ VAL    GG S
Sbjct: 695 GKKTEAIEGVKKKLEGAKTELGKAKGELETAVNGKDGLNGKLAEAKKKLVALTK--GGGS 752

Query: 85  ATTGE---------NSRLNKEIAKLTVEISNIEEKITEASERTQPVYLAQLERERSQIYV 135
               E         ++  ++   K++  I+ + + +    +  + +   +++ ++  + V
Sbjct: 753 GILKELEGALGAANSNDFDQGKNKISEAINGVRDALEALEKGVKDLIKKEVDNDKFALGV 812

Query: 136 AVER--LTHDLESTQKEIHDLNQEYYSLLTSDEWMDANMINSQYQIINRERLKLRSEVNK 193
             +   +T+++E+  ++   ++QEY +LL        N IN+   I N  +    S  +K
Sbjct: 813 IFDPAVVTNEVENVIQQ--GVSQEYTTLL--------NAINNLLSICNSPKC---SACDK 859

Query: 194 H 194
           H
Sbjct: 860 H 860



>EAY07585.1 on XP_001610908  RAP-1  (Adhesin)  [Babesia bovis]
          Length = 565

 Score = 24.6 bits (52), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 5/46 (10%)

Query: 182 RERLKLRSEVNKHFEDQNYAKESKP---DTSNRTKKSISSTANVAE 224
           +E  +   +V KHF D+N A+ +K    D    TKK I  T N+A+
Sbjct: 411 KEFFREAPQVTKHFLDENIAQPTKEFFRDVPQVTKKVI--TENIAQ 454




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07593.1 hypothetical protein TVAG_334050 [Trichomonas
vaginalis G3]
         (261 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_818480   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.9  
XP_815749   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   2.1  
XP_820670   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   8.1  

>EAY07593.1 on XP_818480   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 926

 Score = 26.6 bits (57), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/39 (38%), Positives = 21/39 (53%)

Query: 4   LDDAKNQIQVLNAYLSSEYKKTATILQHSSNTLRSNISL 42
           L DAK + QVL    SSE KK   + + ++    SNI +
Sbjct: 138 LKDAKEKTQVLEEVTSSEEKKKVDVSRPTTVVEGSNIYM 176



>EAY07593.1 on XP_815749   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1053

 Score = 26.2 bits (56), Expect = 2.1,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 7/70 (10%)

Query: 183 RPPEHTVNVKIGGRTISNNNIQPPPAAAKNNLAQIASSPSLLTSSLPL-----PAPKEFS 237
           +P E T    + G + SN+  QP      N+++   +SP  LT+SL +     PA  E  
Sbjct: 839 QPEELTEVADVKGPSESNDTPQPEEEEEANDMSDGTTSP--LTASLSMETVTAPADGEHQ 896

Query: 238 IEDFINMQQD 247
           ++  + +  +
Sbjct: 897 LQQKVELSNE 906



>EAY07593.1 on XP_820670   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 883

 Score = 24.6 bits (52), Expect = 8.1,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 27/59 (45%)

Query: 182 NRPPEHTVNVKIGGRTISNNNIQPPPAAAKNNLAQIASSPSLLTSSLPLPAPKEFSIED 240
           NRP + T    +   TI+N   + P     + L+  AS+P +  S     + ++  +E+
Sbjct: 703 NRPLDGTEITTLAKNTITNPKPEDPKTPTTSPLSPAASAPDVEVSLHRSNSSRQLPLEE 761




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07594.1 hypothetical protein TVAG_334060 [Trichomonas
vaginalis G3]
         (134 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_805336   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   3.9  
XP_820140   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   4.5  

>EAY07594.1 on XP_805336   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 931

 Score = 23.9 bits (50), Expect = 3.9,   Method: Composition-based stats.
 Identities = 9/13 (69%), Positives = 11/13 (84%)

Query: 43  KKGNDVLSTPGML 55
           KKGNDV  +PGM+
Sbjct: 446 KKGNDVKPSPGMV 458



>EAY07594.1 on XP_820140   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 875

 Score = 23.9 bits (50), Expect = 4.5,   Method: Composition-based stats.
 Identities = 9/13 (69%), Positives = 11/13 (84%)

Query: 43  KKGNDVLSTPGML 55
           KKGNDV  +PGM+
Sbjct: 440 KKGNDVKPSPGMV 452




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07612.1 Zn-dependent hydrolase of beta-lactamase,
putative [Trichomonas vaginalis G3]
         (342 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07614.1 hypothetical protein TVAG_334260 [Trichomonas
vaginalis G3]
         (7114 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_808394   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           33   1.0  
XP_001610568  variant erythrocyte surface antigen-1, alpha subun...    31   3.4  
XP_806299   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           31   3.5  
XP_818708   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   5.3  
XP_810953   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   5.4  
XP_844695  VSG  (Establishment)  [Trypanosoma brucei]                  30   5.7  

>EAY07614.1 on XP_808394   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 912

 Score = 32.7 bits (73), Expect = 1.0,   Method: Composition-based stats.
 Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 4/67 (5%)

Query: 2819 KPAYSVVSSIVGNIDPEKIPELTQTNEEIFTTTSSYSVPSYST--TTSVISEIEPREIVL 2876
            +PA   V++      P   P  TQ  E+   T ++ SVPS ST  TT+  S  EP +  L
Sbjct: 710  EPANDTVTTSTQATVPSLTPAGTQPTEQ--ATLNASSVPSGSTPSTTAESSSAEPEQATL 767

Query: 2877 RSSNVLS 2883
             +S+V S
Sbjct: 768  NASSVPS 774



>EAY07614.1 on XP_001610568  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1329

 Score = 30.8 bits (68), Expect = 3.4,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 20/130 (15%)

Query: 697 LQDLQENQQESDKFVDQNTLTNLFEPPVLSMSEIENLISVNEGNEKEFVLSDIKNIININ 756
           ++DL + + ++DKF     L  +F+P V++ +E+EN+I      E   +L+ I N+++I 
Sbjct: 795 VKDLIKKEVDNDKF----ALGVIFDPAVVT-NEVENVIQQGVSQEYTTLLNAINNLLSI- 848

Query: 757 DRSNDLSISQIPTFFVIPSIKSETEISQ------TTLSMSQIESLDEIQLPSDLKYSEVS 810
              N    S           K+E+ I +      TT   S +++  E +LP        S
Sbjct: 849 --CNSPKCSACDKHSTKCGQKAESTICEKCLQPTTTGVPSPLQAFLEDRLPG------FS 900

Query: 811 NFNIKNDNSQ 820
              ++NDNS+
Sbjct: 901 CDVVRNDNSE 910



>EAY07614.1 on XP_806299   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1047

 Score = 30.8 bits (68), Expect = 3.5,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 41/83 (49%), Gaps = 1/83 (1%)

Query: 403 TETKSNEPNEGHKSPKSSQNSENDYEEDFDQIHARDVGFEFTTAEIDESSSVETHISAVD 462
           + +K++  +   +S  ++Q++EN ++ED  Q H      +FT  E  ES   ++ +   D
Sbjct: 774 SSSKADAGSSVPESATAAQSAENSHQEDNAQFHQGKTAQQFTLNEAKESMQRDSDVQPQD 833

Query: 463 QNIVRPLIEISEIDYHQYDNNED 485
                 L E+++++     N+ +
Sbjct: 834 PQPAE-LTEVTDVEMSPESNDTE 855



>EAY07614.1 on XP_818708   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 929

 Score = 30.4 bits (67), Expect = 5.3,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 1/77 (1%)

Query: 3723 SVEFIIDQEEKESTKSLIVSQSQDEIDIYSEPTSL-EYSTTTYSEFVSRIEKTNEEPTEK 3781
            S E   D+E+KE   +L   +  +++D+Y+   SL     T   E V  + KT +E  + 
Sbjct: 428  SSESTTDEEKKEELIALYEKKKDEKVDVYTSSNSLWSVRLTAQLERVKEVLKTWKEADKH 487

Query: 3782 KENLSLSVSEINSTNID 3798
               L  S S + +T+ D
Sbjct: 488  VSQLCPSESAVQATSPD 504




 Score = 30.4 bits (67), Expect = 5.3,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 1/77 (1%)

Query: 5690 SVEFIIDQEEKESTKSLIVSQSQDEIDIYSEPTSL-EYSTTTYSEFVSRIEKTNEEPTEK 5748
            S E   D+E+KE   +L   +  +++D+Y+   SL     T   E V  + KT +E  + 
Sbjct: 428  SSESTTDEEKKEELIALYEKKKDEKVDVYTSSNSLWSVRLTAQLERVKEVLKTWKEADKH 487

Query: 5749 KENLSLSVSEINSTNID 5765
               L  S S + +T+ D
Sbjct: 488  VSQLCPSESAVQATSPD 504



>EAY07614.1 on XP_810953   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 958

 Score = 30.0 bits (66), Expect = 5.4,   Method: Composition-based stats.
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 3/52 (5%)

Query: 5232 TIFISNDESKKQLDVSTTTSYEKEEEEEEKEIVEEFKEDKSHSFVISNENII 5283
            T  I  DE+K+ + + T   Y K  E EEKE V   K+ K H ++  N +I+
Sbjct: 376  TATIEGDENKRNVMLVTLPVYSKNTESEEKENV---KKGKLHLWLTDNTHIV 424



>EAY07614.1 on XP_844695  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 476

 Score = 30.0 bits (66), Expect = 5.7,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 28/54 (51%)

Query: 2452 VSDSTNYESIKTNDSNLMNYKSEPINIISEVKENEINSRDMNFDFTEQKELSIT 2505
            V++   Y +     SN +  K+E   ++ +VKE E N  D+ + FT  K  ++T
Sbjct: 249  VAEGGEYAATDGEASNAIPIKTELTQLLKDVKELEDNVADLPYIFTADKAFTMT 302




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07616.1 hypothetical protein TVAG_334280 [Trichomonas
vaginalis G3]
         (194 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351515  PfEMP1  (Establishment)  [Plasmodium falciparum]         29   0.15 
XP_821078   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   0.65 
XP_815188   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   2.7  
XP_807740   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   3.1  
XP_828097  VSG  (Establishment)  [Trypanosoma brucei]                  24   6.4  
XP_802609   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   6.6  

>EAY07616.1 on XP_001351515  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2181

 Score = 29.3 bits (64), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 144 GYNSLLELCCYHGAIDCFKFLRMKFTSEITTKCLEFSFLGG 184
           G N     C  +G +DC K +R K+   I ++C + SFL G
Sbjct: 333 GENGTDRYCSGNG-LDCTKTIRAKYIYAIGSECTKCSFLCG 372



>EAY07616.1 on XP_821078   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 940

 Score = 27.3 bits (59), Expect = 0.65,   Method: Composition-based stats.
 Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)

Query: 104 AENTIYRAIMNNDKERFIAFTEREE-FDKD 132
           A + +Y++  NN+KE  IA  E++E  DKD
Sbjct: 414 ASSLLYKSADNNEKEELIALYEKKEGGDKD 443



>EAY07616.1 on XP_815188   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 862

 Score = 25.4 bits (54), Expect = 2.7,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 7/48 (14%)

Query: 102 IHAENTIYRAIMNNDKERFIAFTEREEFDKDQKLESSLYPKYGYNSLL 149
           + A + +Y+ I NN++E+ IA  E+++   D+K      P  G  S+L
Sbjct: 415 VAASSLLYK-IGNNNEEKLIALYEKKKAGDDEK------PSLGMVSVL 455



>EAY07616.1 on XP_807740   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 681

 Score = 25.0 bits (53), Expect = 3.1,   Method: Composition-based stats.
 Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 3/35 (8%)

Query: 104 AENTIYRAIMNNDKERFIAFTEREEFDKDQKLESS 138
           A + +Y++  NN+KE  IA  E++   KD + E+S
Sbjct: 422 ASSLLYKSGDNNEKEELIALYEKK---KDGEKETS 453



>EAY07616.1 on XP_828097  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 520

 Score = 24.3 bits (51), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 76  DSFTALYQLKTENEEELNSIYKMIKAIHAENTIYRAIMNND 116
           D+ TAL  +  + E+  N   ++   +   N IY A +N D
Sbjct: 350 DAVTALENMHKQEEKANNLDAQLANLLKQANLIYAAALNGD 390



>EAY07616.1 on XP_802609   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 699

 Score = 24.3 bits (51), Expect = 6.6,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 19/34 (55%)

Query: 104 AENTIYRAIMNNDKERFIAFTEREEFDKDQKLES 137
           A + +Y++    D +  IA  E++E  +D+K  S
Sbjct: 254 ASSLLYKSAEGEDNKELIALYEKKEGGEDEKSRS 287




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07619.1 Carbohydrate binding domain containing
protein [Trichomonas vaginalis G3]
         (318 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07626.1 TPR Domain containing protein [Trichomonas
vaginalis G3]
         (564 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_814755   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   0.72 
XP_817001   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   1.6  
XP_817716   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   3.4  
XP_001349515  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   5.4  

>EAY07626.1 on XP_814755   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 934

 Score = 29.3 bits (64), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 36/170 (21%)

Query: 179 YQKLLAEHP-DYIALNVYIAMCLFKLEKYQESNDI-VDEYLGINS-------DSAVGL-- 227
           Y+  L + P D    N  I   L        S+D   DEYLG+N+        +A G+  
Sbjct: 487 YKSALEDTPTDTACKNTKITDGLVGFLSGNFSDDTWKDEYLGVNATVKKGTKGAAAGVAE 546

Query: 228 NLKSCDYFKLFPDPSVAESQIL-----QIKKFGSASYTFVDELIQHNLCVFSAGVDGYKV 282
             +S D  K     + AE  +      Q+ +F  A+Y F          V +  +DG   
Sbjct: 547 TAESSDGVKFTGRGAWAEWPVGKQGENQLYRF--ANYNFT--------LVATVSIDG--- 593

Query: 283 FPK------LIGVVPEAKNNLATLYIKDNNADEAYQLLEDFKPSDVNDFI 326
            PK      +IGV+ +A+N +  L +  NN ++ +Q+L   KP++V + I
Sbjct: 594 VPKQEGPIPVIGVMMDAENPV-LLGLSYNNKEKKWQMLCGEKPTEVQNHI 642



>EAY07626.1 on XP_817001   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 928

 Score = 28.1 bits (61), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 40/136 (29%)

Query: 214 DEYLGINS----------DSAVGLNLKSCDYFKL------FPDPSVAESQILQIKKFGSA 257
           DEYLG+N+           + V    +S D  K       +P     E+Q+        A
Sbjct: 520 DEYLGVNATVKKGEEEGASAGVAETAESSDGVKFTGAWAEWPVGRQGENQLYHF-----A 574

Query: 258 SYTFVDELIQHNLCVFSAGVDGYKVFPK-------LIGVVPEAKNNLATLYIKDNNADEA 310
           +Y F          V +A +DG    PK       +IGV+ +A+N +  L +  NN ++ 
Sbjct: 575 NYNFT--------LVATASIDGE---PKEGDTPIPVIGVMMDAENPV-LLGLSYNNKEKK 622

Query: 311 YQLLEDFKPSDVNDFI 326
           +Q+L   KP++V + I
Sbjct: 623 WQMLCGGKPTEVQNHI 638



>EAY07626.1 on XP_817716   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 948

 Score = 26.9 bits (58), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 26/125 (20%)

Query: 214 DEYLGINSDSAVGLNLK---SCDYFKL------FPDPSVAESQILQIKKFGSASYTFVDE 264
           DEYLG+N+ +  G   K   S D  K       +P     E+Q+ +      A+Y F   
Sbjct: 545 DEYLGVNA-TVTGETTKVTESSDGVKFRGAWAEWPVGKQGENQLYRF-----ANYNFT-- 596

Query: 265 LIQHNLCVFSAGVDGY--KVFP-KLIGVVPEAKNNLATLYIKDNNADEAYQLLEDFKPSD 321
                  V +  +DG   K  P  ++GV      N   L +  NN ++ +Q+L   KP++
Sbjct: 597 ------LVATVSIDGVPTKEGPIPVMGVKMSDAENPVLLGLSYNNKEKKWQMLCGGKPTE 650

Query: 322 VNDFI 326
           V + I
Sbjct: 651 VQNHI 655



>EAY07626.1 on XP_001349515  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 1711

 Score = 26.6 bits (57), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 12/28 (42%), Positives = 16/28 (57%)

Query: 454 WQQYLNATQTETATSLLQIIASECYLNG 481
           WQ+Y    Q ETA++ L I   +  LNG
Sbjct: 913 WQKYKEDKQNETASTELDIDDPQTQLNG 940




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07633.1 PH domain containing protein [Trichomonas
vaginalis G3]
         (729 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351876  PfEMP1  (Establishment)  [Plasmodium falciparum]         31   0.31 
XP_805038   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.56 
XP_808165   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.68 
XP_821146   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   4.9  
XP_808182   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   5.3  
XP_803952   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   6.0  
XP_806299   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   6.3  
XP_820186   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   7.3  
XP_815706   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   7.8  
XP_815707   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   7.8  

>EAY07633.1 on XP_001351876  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3164

 Score = 30.8 bits (68), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)

Query: 495  QDILEFTVGKEYMHISRILIEHGANADNISIEKPINGLPPLVFAIQIQNMHVLNRILESH 554
            +DI + T   EY+++   L E   N D   ++KP + LP     +Q  N + +   L+ H
Sbjct: 2372 RDIEKATYAHEYLNMK--LKEFCGNKDCSCMQKPSSQLPKTKSPLQPSNGNDMPESLDYH 2429

Query: 555  P 555
            P
Sbjct: 2430 P 2430



>EAY07633.1 on XP_805038   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 927

 Score = 30.0 bits (66), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 4/90 (4%)

Query: 644 SNPTMEEPKSNKTKQ-QETQITASSSSEKVSEPPQEENQDNQQQFNEEEGQNEQEAEAEQ 702
           + PT+  P +   +Q  +T +  SS     + P   E +  + +  E   +  + AE+E 
Sbjct: 720 TQPTVPPPATAGPQQTDQTTLNTSSVPSGGAPPTPAEPKSEEPKPAESRPEEPKPAESES 779

Query: 703 EEPSSSISSSTTENDNE---EDEKTSTSSD 729
           EEP  +  ++ T +  E   +   ++TSSD
Sbjct: 780 EEPKPAEPNAATSSAREGTADQPASATSSD 809




 Score = 26.6 bits (57), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 14/83 (16%)

Query: 646 PTMEEPKSNKTKQQETQITASSSSEKVSEPPQEENQDNQQQFNEEEGQNEQEAEAEQEEP 705
           PT  EPKS + K  E+         +  EP   E++  + +  E         E   ++P
Sbjct: 752 PTPAEPKSEEPKPAES---------RPEEPKPAESESEEPKPAEPNAATSSAREGTADQP 802

Query: 706 SSSISSSTTENDNEEDEKTSTSS 728
           +S+ SS     D  E   + TSS
Sbjct: 803 ASATSS-----DGHEAVTSVTSS 820



>EAY07633.1 on XP_808165   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 918

 Score = 29.6 bits (65), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 13/57 (22%), Positives = 31/57 (54%)

Query: 673 SEPPQEENQDNQQQFNEEEGQNEQEAEAEQEEPSSSISSSTTENDNEEDEKTSTSSD 729
           S P + E+++ +   +E EG    E+E+E  +P+   +++++  +   D+  S +S 
Sbjct: 755 STPAESESEEPKSADSESEGPRPAESESEGPKPAEPNAATSSARERSADQSASVTSS 811



>EAY07633.1 on XP_821146   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 911

 Score = 26.9 bits (58), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 38/166 (22%), Positives = 71/166 (42%), Gaps = 14/166 (8%)

Query: 1   MQVLKCGWCKKEGHFVKNIKNRFLKLSPEKLSYYTDEAGKLKGEITIYDETKFISMETPE 60
           +  L C W  K+G  VK +++ F+     K+    D+   +   + +Y E +        
Sbjct: 335 LGTLSCVWGNKKGGKVKAVRSGFITA---KIDGVADKRNVMLVTLPVYPEEESKKENGKG 391

Query: 61  GLPMFLIEGKRNTKYKIFPPSLEERDDWLMVLRNCAKYQSGCRNPLVKESMGKIYTNYIK 120
            L ++L +   NT      P   + DD      +   Y+SG ++   ++   K+   Y K
Sbjct: 392 KLHLWLTD---NTHIVDIGPVSGKDDD---AAASSLLYKSG-KDGDNEQKGEKLIALYEK 444

Query: 121 TADLLAKADDGLSIFTINYLTNKVKEFVYTYKEAFEMISYFAELNP 166
             D   K   G+    ++    +VKE + T+K+A +++S   EL P
Sbjct: 445 KGD-EGKTSPGVVSVLLSAQLKRVKEVLTTWKKADDLVS---ELCP 486



>EAY07633.1 on XP_808182   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 918

 Score = 26.9 bits (58), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 7/90 (7%)

Query: 643 LSNPTMEEPKSNKTKQQETQITASSSSEKVSEPP---QEENQDNQQQFNEEEGQNEQEAE 699
           ++NP  E PK++ T  +   ++ S     VS+     Q +++  QQ+++   G       
Sbjct: 727 ITNPKREGPKTSTTSPRSPAVSGSDVQGTVSQSSSAGQLQSEQGQQKWSNGAGAGGASTP 786

Query: 700 AEQEEPSSSISSSTTENDNEEDEKTSTSSD 729
           A     S++ +SS  E  N+    TS+S +
Sbjct: 787 AT----STAAASSGQEPVNQPTSGTSSSGN 812



>EAY07633.1 on XP_803952   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 200

 Score = 26.2 bits (56), Expect = 6.0,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 5/79 (6%)

Query: 653 SNKTKQQETQITASSSSEKVSEPPQEENQDNQQQFNEEEGQNEQEAEAEQEEPSSSISSS 712
           S +T   ++ +T S S    +EP   E+ DN       E   E   E  Q   ++  ++S
Sbjct: 79  SERTMSSDSSLTPSKSD---AEPRSAEDTDNISWTERAEFSVEDSKEVPQTVDTAPGNTS 135

Query: 713 TTENDNE--EDEKTSTSSD 729
           TT  + +   +   +T SD
Sbjct: 136 TTPGETKIPSESNATTPSD 154



>EAY07633.1 on XP_806299   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1047

 Score = 26.6 bits (57), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 14/79 (17%)

Query: 657 KQQETQITASSSSEKVSEPPQEENQDNQQQFNEEEGQNEQE--------------AEAEQ 702
           ++Q T+  +S+     SEP  EE+  + ++  E++   ++E              A+A  
Sbjct: 723 EKQPTEQVSSTDVSIASEPRSEESTASHEELTEDDTDEQEEGIVNDLLLAASSSKADAGS 782

Query: 703 EEPSSSISSSTTENDNEED 721
             P S+ ++ + EN ++ED
Sbjct: 783 SVPESATAAQSAENSHQED 801



>EAY07633.1 on XP_820186   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1133

 Score = 26.6 bits (57), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%)

Query: 646  PTMEEPKSNKTKQQETQITASSSSE-KVSEPPQEENQDNQQQFNEEEGQNEQEAEAEQEE 704
            P   EPK  + K  E +     S+E K +EP   E +  + +  E +    + AE +  E
Sbjct: 967  PKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAE 1026

Query: 705  PSSSISSS 712
            P+++ SS+
Sbjct: 1027 PNAATSSA 1034




 Score = 25.8 bits (55), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 1/64 (1%)

Query: 646 PTMEEPKSNKTKQQETQITASSSSE-KVSEPPQEENQDNQQQFNEEEGQNEQEAEAEQEE 704
           P   EPK  + K  E +   S S+E K +EP   E +  + +  E +    + AE +  E
Sbjct: 797 PKSAEPKPAEPKSAEPKPAESKSAEPKPAEPKSAEPKPAESKSAEPKPAEPKSAEPKPAE 856

Query: 705 PSSS 708
           P S+
Sbjct: 857 PKSA 860



>EAY07633.1 on XP_815706   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 907

 Score = 26.2 bits (56), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 20/93 (21%), Positives = 40/93 (43%), Gaps = 7/93 (7%)

Query: 644 SNPTMEEPKS---NKTKQQETQITASSSSEKVSEPPQEENQDNQQQFNEEEGQNEQEAEA 700
           + PT+  P +     T Q+    ++  S   +SEP     ++ +   +  E     E+  
Sbjct: 721 TQPTVPSPATAGPQPTDQKSLSASSVPSGGALSEPAASRPEEPEPAESRPEEPEPAESRP 780

Query: 701 EQEEP----SSSISSSTTENDNEEDEKTSTSSD 729
           E+ EP    ++   +S T +D    +  ++SSD
Sbjct: 781 EEPEPAREGTADQPASVTSSDAASTDVGASSSD 813



>EAY07633.1 on XP_815707   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 907

 Score = 26.2 bits (56), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 20/93 (21%), Positives = 40/93 (43%), Gaps = 7/93 (7%)

Query: 644 SNPTMEEPKS---NKTKQQETQITASSSSEKVSEPPQEENQDNQQQFNEEEGQNEQEAEA 700
           + PT+  P +     T Q+    ++  S   +SEP     ++ +   +  E     E+  
Sbjct: 721 TQPTVPSPATAGPQPTDQKSLSASSVPSGGALSEPAASRPEEPEPAESRPEEPEPAESRP 780

Query: 701 EQEEP----SSSISSSTTENDNEEDEKTSTSSD 729
           E+ EP    ++   +S T +D    +  ++SSD
Sbjct: 781 EEPEPAREGTADQPASVTSSDAASTDVGASSSD 813




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07638.1 AGC family protein kinase [Trichomonas
vaginalis G3]
         (430 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    64   5e-12
AAA29770  TRAP  (Invasion)  [Plasmodium falciparum]                    27   3.7  
AAA29777  TRAP  (Invasion)  [Plasmodium falciparum]                    26   3.7  
AAW78158  TRAP  (Invasion)  [Plasmodium falciparum]                    25   8.6  
AAW78137  TRAP  (Invasion)  [Plasmodium falciparum]                    25   8.6  
AAW78157  TRAP  (Invasion)  [Plasmodium falciparum]                    25   8.6  
AAA29775  TRAP  (Invasion)  [Plasmodium falciparum]                    25   8.7  
AAW78141  TRAP  (Invasion)  [Plasmodium falciparum]                    25   8.9  
AAW78161  TRAP  (Invasion)  [Plasmodium falciparum]                    25   9.0  
AAW78164  TRAP  (Invasion)  [Plasmodium falciparum]                    25   9.3  
AAQ11895  TRAP  (Invasion)  [Plasmodium falciparum]                    25   9.6  
AAW78139  TRAP  (Invasion)  [Plasmodium falciparum]                    25   9.6  
AAW78174  TRAP  (Invasion)  [Plasmodium falciparum]                    25   9.7  
AAQ11894  TRAP  (Invasion)  [Plasmodium falciparum]                    25   9.9  
AAA29771  TRAP  (Invasion)  [Plasmodium falciparum]                    25   9.9  
AAA29774  TRAP  (Invasion)  [Plasmodium falciparum]                    25   10.0 

>EAY07638.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 63.5 bits (153), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 8/121 (6%)

Query: 193 LFAHIKRDGF------LHEEEYKLVLAQVALVLNHLHSIGVIYRDMKPENIMIGQDGYI- 245
           +F H+    F      L  ++ K  + Q+   +N+ HS G+++RD+KP N+MI  +  I 
Sbjct: 128 IFEHVNNTDFKTLYPTLTIQDIKYYIYQLLKAMNYCHSQGIMHRDIKPHNVMIDHEKKIL 187

Query: 246 KLTDFGLAKDITVEDTTSTFCGTPDYIAPEVVRGLN-YDKSVDWWALGILAFELMYHRTP 304
           +L D+GLA+    E   S    T  Y  PE++  +  YD S+D W++G +   +++ + P
Sbjct: 188 RLIDWGLAEFYHPEQEYSVRVATRYYKGPELLVDMRYYDYSLDIWSIGCMLAGIIFKKEP 247

Query: 305 F 305
           F
Sbjct: 248 F 248



>EAY07638.1 on AAA29770  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 559

 Score = 26.6 bits (57), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 9/23 (39%), Positives = 15/23 (65%)

Query: 304 PFHSQNRDKTYRKIVNDSPKFPE 326
           P    N +++Y +  ND+PK+PE
Sbjct: 453 PHGRNNENRSYNRKYNDTPKYPE 475



>EAY07638.1 on AAA29777  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 559

 Score = 26.2 bits (56), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 9/23 (39%), Positives = 15/23 (65%)

Query: 304 PFHSQNRDKTYRKIVNDSPKFPE 326
           P    N +++Y +  ND+PK+PE
Sbjct: 453 PHGRNNENRSYNRKYNDTPKYPE 475



>EAY07638.1 on AAW78158  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 542

 Score = 25.0 bits (53), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 304 PFHSQNRDKTYRKIVNDSPKFPE 326
           P    N +++Y +  ND+PK PE
Sbjct: 456 PHGRNNENRSYNRKYNDTPKHPE 478



>EAY07638.1 on AAW78137  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 545

 Score = 25.0 bits (53), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 304 PFHSQNRDKTYRKIVNDSPKFPE 326
           P    N +++Y +  ND+PK PE
Sbjct: 459 PHGRNNENRSYNRKYNDTPKHPE 481



>EAY07638.1 on AAW78157  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 557

 Score = 25.0 bits (53), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 304 PFHSQNRDKTYRKIVNDSPKFPE 326
           P    N +++Y +  ND+PK PE
Sbjct: 471 PHGRNNENRSYNRKYNDTPKHPE 493



>EAY07638.1 on AAA29775  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 574

 Score = 25.0 bits (53), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 304 PFHSQNRDKTYRKIVNDSPKFPE 326
           P    N +++Y +  ND+PK PE
Sbjct: 468 PHGRNNENRSYNRKYNDTPKHPE 490



>EAY07638.1 on AAW78141  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 545

 Score = 25.0 bits (53), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 304 PFHSQNRDKTYRKIVNDSPKFPE 326
           P    N +++Y +  ND+PK PE
Sbjct: 459 PHGRNNENRSYNRKYNDTPKHPE 481



>EAY07638.1 on AAW78161  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 554

 Score = 25.0 bits (53), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 304 PFHSQNRDKTYRKIVNDSPKFPE 326
           P    N +++Y +  ND+PK PE
Sbjct: 468 PHGRNNENRSYNRKYNDTPKHPE 490



>EAY07638.1 on AAW78164  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 25.0 bits (53), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 304 PFHSQNRDKTYRKIVNDSPKFPE 326
           P    N +++Y +  ND+PK PE
Sbjct: 453 PHGRNNENRSYNRKYNDTPKHPE 475



>EAY07638.1 on AAQ11895  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 559

 Score = 25.0 bits (53), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 304 PFHSQNRDKTYRKIVNDSPKFPE 326
           P    N +++Y +  ND+PK PE
Sbjct: 453 PHGRNNENRSYNRKYNDTPKHPE 475



>EAY07638.1 on AAW78139  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 545

 Score = 25.0 bits (53), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 304 PFHSQNRDKTYRKIVNDSPKFPE 326
           P    N +++Y +  ND+PK PE
Sbjct: 459 PHGRNNENRSYNRKYNDTPKHPE 481



>EAY07638.1 on AAW78174  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 25.0 bits (53), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 304 PFHSQNRDKTYRKIVNDSPKFPE 326
           P    N +++Y +  ND+PK PE
Sbjct: 453 PHGRNNENRSYNRKYNDTPKHPE 475



>EAY07638.1 on AAQ11894  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 559

 Score = 25.0 bits (53), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 304 PFHSQNRDKTYRKIVNDSPKFPE 326
           P    N +++Y +  ND+PK PE
Sbjct: 453 PHGRNNENRSYNRKYNDTPKHPE 475



>EAY07638.1 on AAA29771  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 559

 Score = 25.0 bits (53), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 304 PFHSQNRDKTYRKIVNDSPKFPE 326
           P    N +++Y +  ND+PK PE
Sbjct: 453 PHGRNNENRSYNRKYNDTPKHPE 475



>EAY07638.1 on AAA29774  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 559

 Score = 25.0 bits (53), Expect = 10.0,   Method: Compositional matrix adjust.
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 304 PFHSQNRDKTYRKIVNDSPKFPE 326
           P    N +++Y +  ND+PK PE
Sbjct: 453 PHGRNNENRSYNRKYNDTPKHPE 475




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07641.1 AGC family protein kinase [Trichomonas
vaginalis G3]
         (358 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    52   2e-08
XP_001349740  PfEMP1  (Establishment)  [Plasmodium falciparum]         30   0.27 
XP_001349515  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   1.9  

>EAY07641.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 52.0 bits (123), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 8/103 (7%)

Query: 60  RHYFVQLISALHYLHSEIHIIHCDIKLENILIDEYDNI-RVVDFGLSHLLSEYNPDVTHG 118
           ++Y  QL+ A++Y HS+  I+H DIK  N++ID    I R++D+GL+     Y+P+  + 
Sbjct: 150 KYYIYQLLKAMNYCHSQ-GIMHRDIKPHNVMIDHEKKILRLIDWGLAEF---YHPEQEYS 205

Query: 119 --FGTISYCSQEML-RRKNYTITTDFWSAGVVLYAMITGHLPF 158
               T  Y   E+L   + Y  + D WS G +L  +I    PF
Sbjct: 206 VRVATRYYKGPELLVDMRYYDYSLDIWSIGCMLAGIIFKKEPF 248



>EAY07641.1 on XP_001349740  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3346

 Score = 30.0 bits (66), Expect = 0.27,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 58/145 (40%), Gaps = 28/145 (19%)

Query: 218  AQYLTCELITSTEYSLRKKINQTVMKNLQSKGFNTQTILHAINSKDFSGISAPYFILAQK 277
            +QY+  E +   +Y + K++   ++ N+   G N +  + +I+ +D          L   
Sbjct: 3080 SQYIQSEPLNVPQYDVLKELPMNIVGNVLDDGINEKPFITSIHDRD----------LNSG 3129

Query: 278  EMISKIYLTVFNRNFSLSTIQEKRPITYKNPSYQRFGSSTFSISLGSPTKNLHRSVGEKR 337
            E IS      +N N S +++ + + ++  N  Y        S+S G P       +  K 
Sbjct: 3130 EEIS------YNINMSTNSMDDPKYVS--NNVYSGIDLINDSLSGGKPIDIYDEVLKRKE 3181

Query: 338  LPLL----------SQVPKLTNSSP 352
              L           + V KLTNS P
Sbjct: 3182 NELFGTNYKKNTSNNNVAKLTNSDP 3206



>EAY07641.1 on XP_001349515  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 1711

 Score = 27.3 bits (59), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 107 LLSEYNPDVTHGFGTISYCSQEMLRR 132
           L  +YN +VTHGFG    C  +++ R
Sbjct: 67  LQYDYNTNVTHGFGQEYPCETDIVER 92




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07649.1 hypothetical protein TVAG_430130 [Trichomonas
vaginalis G3]
         (462 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_820135   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   8.7  

>EAY07649.1 on XP_820135   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1519

 Score = 25.4 bits (54), Expect = 8.7,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 4/71 (5%)

Query: 141  ARQQAEKIRTAQIRAMNFEFKSREKVFTPPEYRPSEPDPAELRRNQIRQEIAKQRHDQWV 200
            A Q++ + +TA+ +    E KS E    P E +P+EP PAE +  + +    K    +  
Sbjct: 1356 AEQKSAEPKTAEPKPA--EPKSAEP--KPAEPKPAEPKPAEPKSAEPKPAEPKSAEPKPA 1411

Query: 201  EKERQIQSARQ 211
            E      SAR+
Sbjct: 1412 EPNAATSSARE 1422




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07662.1 hypothetical protein TVAG_273460 [Trichomonas
vaginalis G3]
         (795 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07668.1 hypothetical protein TVAG_273520 [Trichomonas
vaginalis G3]
         (149 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_821137   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   3.7  
XP_813237   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   4.7  
XP_812607   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   6.8  

>EAY07668.1 on XP_821137   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 956

 Score = 24.3 bits (51), Expect = 3.7,   Method: Composition-based stats.
 Identities = 8/14 (57%), Positives = 11/14 (78%)

Query: 41  WEYDKNHKTLSREV 54
           W Y+K HK+L+R V
Sbjct: 240 WNYNKQHKSLARLV 253



>EAY07668.1 on XP_813237   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1496

 Score = 24.3 bits (51), Expect = 4.7,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 17/35 (48%)

Query: 112 SEKFDISPPEKKKKEKKEKKVEEKKEPEPVPEKKK 146
           + K  I PP+  + +  E K  E K  EP P + K
Sbjct: 687 ANKVTIPPPKSAEPKPAEPKSAEPKPAEPKPAEPK 721



>EAY07668.1 on XP_812607   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 957

 Score = 23.5 bits (49), Expect = 6.8,   Method: Composition-based stats.
 Identities = 8/14 (57%), Positives = 11/14 (78%)

Query: 41  WEYDKNHKTLSREV 54
           W Y+K HK+L+R V
Sbjct: 237 WNYNKQHKSLARLV 250




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07672.1 Ser/Thr protein phosphatase, putative
[Trichomonas vaginalis G3]
         (375 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]                 26   4.1  
AAS90335  Toxomepsin 1  (Protease)  [Toxoplasma gondii]                25   6.8  

>EAY07672.1 on XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]
          Length = 2112

 Score = 26.2 bits (56), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 5/48 (10%)

Query: 198  IKTCDDKLLADLM-----WSDPTSETKTYARSTRGLGISYGSTLVGDY 240
            I+ CDD    D+      WSD +S +KT   STR    +     +G+Y
Sbjct: 1640 IQECDDNNNVDICEDIGEWSDWSSCSKTCGYSTRSRTFTILPEYIGEY 1687



>EAY07672.1 on AAS90335  Toxomepsin 1  (Protease)  [Toxoplasma gondii]
          Length = 255

 Score = 25.0 bits (53), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 9/32 (28%), Positives = 17/32 (53%)

Query: 187 DTAQIEKMERPIKTCDDKLLADLMWSDPTSET 218
           D+A +  +     T +D+ + D  W DP+S +
Sbjct: 32  DSASVSSLPGICSTAEDRDVEDESWKDPSSSS 63




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07673.1 IQ calmodulin-binding motif family protein
[Trichomonas vaginalis G3]
         (1544 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_819341   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           33   0.15 
XP_820135   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           33   0.20 
XP_820186   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           32   0.36 
XP_803397   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.97 
XP_808957   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   1.1  
XP_810140   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   2.1  
XP_814930   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   2.9  
XP_818848   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   4.9  

>EAY07673.1 on XP_819341   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 888

 Score = 33.1 bits (74), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 13/131 (9%)

Query: 366 YLLNMIIVRWLLMFCKLLQFINPNSDN----ITTPKNKMIESHPSDDAESVHQRDVKQIL 421
           Y   M++V  ++M C  ++    + +N    I  PK         DD E+V    V  ++
Sbjct: 45  YSALMLLV--VMMCCNTVEAQQTSEENSPAPIPPPKTYFDWGDVKDDKETVISLRVPSLV 102

Query: 422 SQLQDDMSYLKEKYKNNKGNKEDLNREIKELIQNADRD-------LRLKTQAIVRARLSQ 474
               D  +  + + K   GN+ED      EL++ +D          +L+TQ ++     +
Sbjct: 103 GMNGDVFAVAEAQCKGKNGNEEDFTGIASELLKLSDEQKKVELDKTKLRTQVLLECTADK 162

Query: 475 SRCLPVNAFKE 485
            +C   NA  E
Sbjct: 163 EKCASQNAALE 173



>EAY07673.1 on XP_820135   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1519

 Score = 32.7 bits (73), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 4/80 (5%)

Query: 1457 QQNEETKPDNTQS-ESKP-EENNNEQTPSEAKTEESKPDNSSNEDTKQNE--STEKQETE 1512
            Q++ E+KP   +S ESKP E+ + E  P+E K+ E KP    + ++K  E  S E +  E
Sbjct: 1063 QKSAESKPAEQKSAESKPAEQKSAESKPAEPKSAEPKPAEQKSAESKPAEQKSAESKPAE 1122

Query: 1513 NKIENKEDVKPSTDENKPEE 1532
             K    +  +P   E KP E
Sbjct: 1123 PKSAEPKPAEPKPAEPKPAE 1142




 Score = 29.3 bits (64), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 63/151 (41%), Gaps = 13/151 (8%)

Query: 1398 TATNKTTKTEEEDHKEQEEKS---NPENDKKPEPE-VHPTPNQSSEKLLKFDSKDKIDVQ 1453
            +A  K T+ +    K  E+KS    P   K  EP+   P P +      K         +
Sbjct: 1155 SAEPKPTEPKSAGPKPAEQKSAESKPAEPKPAEPKPAGPKPAEPKPAEPKPAEPKPAGPK 1214

Query: 1454 ANNQQNEETKPDNTQS-ESKP-EENNNEQTPSEAKTEESKPDNSSNEDTKQNE------- 1504
               Q++ E+KP   +S E KP E+ + E  P+E K+ E KP    + + K  E       
Sbjct: 1215 PAEQKSAESKPAEPKSAEPKPAEQKSAEPKPAEPKSAEPKPAEPKSAEPKPAEQKSAEFK 1274

Query: 1505 STEKQETENKIENKEDVKPSTDENKPEEENT 1535
              E +  E K    +  +P + E KP E+ +
Sbjct: 1275 PAEPKPAEPKSAEPKPAEPKSAEPKPAEQKS 1305




 Score = 28.5 bits (62), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 4/76 (5%)

Query: 1461 ETKPDNTQS-ESKP-EENNNEQTPSEAKTEESKPDNSSNEDTKQNE--STEKQETENKIE 1516
            E KP   +S E KP E+ + E  P+E K+ E KP    + + K  E  S E +  E K  
Sbjct: 722  EPKPAEPKSAEPKPAEQKSAEPKPAEPKSAEPKPTEPKSAEPKPAEPKSAEPKPAEPKPA 781

Query: 1517 NKEDVKPSTDENKPEE 1532
              +  +P + E KP E
Sbjct: 782  EPKPAEPKSAEPKPAE 797



>EAY07673.1 on XP_820186   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1133

 Score = 32.0 bits (71), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 4/79 (5%)

Query: 1458 QNEETKPDNTQS-ESKPEE-NNNEQTPSEAKTEESKPDNSSNEDTKQNE--STEKQETEN 1513
            ++ E KP   +S E KP E  + E  P+E K+ E KP  S + + K  E  S E +  E+
Sbjct: 778  KSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAESKSAEPKPAEPKSAEPKPAES 837

Query: 1514 KIENKEDVKPSTDENKPEE 1532
            K    +  +P + E KP E
Sbjct: 838  KSAEPKPAEPKSAEPKPAE 856




 Score = 31.6 bits (70), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)

Query: 1458 QNEETKPDNTQS-ESKPEE-NNNEQTPSEAKTEESKPDNSSNEDTKQNE--STEKQETEN 1513
            ++ E KP   +S E KP E N+ E  P+E K+ E KP    + + K  E  S E +  E 
Sbjct: 918  KSAEPKPAEPKSAEPKPAEPNSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEP 977

Query: 1514 KIENKEDVKPSTDENKPEE 1532
            K    +  +P + E KP E
Sbjct: 978  KSAEPKPAEPKSAEPKPAE 996




 Score = 30.8 bits (68), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 4/82 (4%)

Query: 1458 QNEETKPDNTQS-ESKPEE-NNNEQTPSEAKTEESKPDNSSNEDTKQNE--STEKQETEN 1513
            ++ E KP  ++S E KP E  + E  P+E+K+ E KP    + + K  E  S E +  E 
Sbjct: 808  KSAEPKPAESKSAEPKPAEPKSAEPKPAESKSAEPKPAEPKSAEPKPAEPKSAEPKPAEP 867

Query: 1514 KIENKEDVKPSTDENKPEEENT 1535
            K    +  +P + E KP E  +
Sbjct: 868  KSAEPKPAEPKSAEPKPAESKS 889




 Score = 30.4 bits (67), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 4/79 (5%)

Query: 1458 QNEETKPDNTQS-ESKPEE-NNNEQTPSEAKTEESKPDNSSNEDTKQNE--STEKQETEN 1513
            ++ E KP   +S E KP E  + E  P+E K+ E KP  S +   K  E  S E +  E 
Sbjct: 848  KSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAESKSAGPKPAEPKSAEPKPAEP 907

Query: 1514 KIENKEDVKPSTDENKPEE 1532
            K    +  +P + E KP E
Sbjct: 908  KSAEPKPAEPKSAEPKPAE 926




 Score = 30.0 bits (66), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 4/79 (5%)

Query: 1458 QNEETKPDNTQS-ESKPEE-NNNEQTPSEAKTEESKP--DNSSNEDTKQNESTEKQETEN 1513
            ++ E KP   +S E KP E  + E  P+E K+ E KP   NS+     + +S E +  E 
Sbjct: 898  KSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPNSAEPKPAEPKSAEPKPAEP 957

Query: 1514 KIENKEDVKPSTDENKPEE 1532
            K    +  +P + E KP E
Sbjct: 958  KSAEPKPAEPKSAEPKPAE 976




 Score = 29.6 bits (65), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 4/79 (5%)

Query: 1458 QNEETKPDNTQS-ESKPEE-NNNEQTPSEAKTEESKPDNSSNEDTK--QNESTEKQETEN 1513
            ++ E KP   +S E KP E  + E  P+E+K+ E KP    + + K  +++S E +  E 
Sbjct: 788  KSAEPKPAEPKSAEPKPAEPKSAEPKPAESKSAEPKPAEPKSAEPKPAESKSAEPKPAEP 847

Query: 1514 KIENKEDVKPSTDENKPEE 1532
            K    +  +P + E KP E
Sbjct: 848  KSAEPKPAEPKSAEPKPAE 866




 Score = 29.3 bits (64), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 59/137 (43%), Gaps = 8/137 (5%)

Query: 1399 ATNKTTKTEEEDHKEQEEKSNPENDKKPEPEVHPTPNQSSEKLLKFDSKDKIDVQANNQQ 1458
            A +K+   +  + K  E K       +P+P     P  +  K  +  S +    + N+ +
Sbjct: 885  AESKSAGPKPAEPKSAEPKPAEPKSAEPKPA---EPKSAEPKPAEPKSAEPKPAEPNSAE 941

Query: 1459 NEETKPDNTQSESKPEE-NNNEQTPSEAKTEESKPDNSSNEDTKQNE--STEKQETENKI 1515
             +  +P +  +E KP E  + E  P+E K+ E KP    + + K  E  S E +  E K 
Sbjct: 942  PKPAEPKS--AEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKS 999

Query: 1516 ENKEDVKPSTDENKPEE 1532
               +  +P + E KP E
Sbjct: 1000 AEPKPAEPKSAEPKPAE 1016




 Score = 28.1 bits (61), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 4/79 (5%)

Query: 1458 QNEETKPDNTQS-ESKPEENNNEQT-PSEAKTEESKPDNSSNEDTKQNE--STEKQETEN 1513
            ++ E KP   +S E KP E+ +    P+E K+ E KP    + + K  E  S E +  E 
Sbjct: 868  KSAEPKPAEPKSAEPKPAESKSAGPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEP 927

Query: 1514 KIENKEDVKPSTDENKPEE 1532
            K    +  +P++ E KP E
Sbjct: 928  KSAEPKPAEPNSAEPKPAE 946




 Score = 27.3 bits (59), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 2/64 (3%)

Query: 1474 EENNNEQTPSEAKTEESKPDNSSNEDTKQNE--STEKQETENKIENKEDVKPSTDENKPE 1531
            E  + E  P+E K+ E KP    + + K  E  S E +  E+K    +  +P + E KP 
Sbjct: 776  EPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAESKSAEPKPAEPKSAEPKPA 835

Query: 1532 EENT 1535
            E  +
Sbjct: 836  ESKS 839



>EAY07673.1 on XP_803397   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 376

 Score = 30.0 bits (66), Expect = 0.97,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 65/168 (38%), Gaps = 12/168 (7%)

Query: 1356 FVDDQEKDKDEKKDEKEAKEEEEKNENLPDLKELVVLDSASTTATNKTTKTEEEDHKEQE 1415
            F DD  K    K +      E++  E   +   LV  +S S   T    K  E+D  EQE
Sbjct: 28   FGDDLHKLHASKVNIPSLGAEKQPTEQAANTGALVASESKSEEITASYAKLNEDDLDEQE 87

Query: 1416 EKSNPENDKKPEPEVHPTPNQSSEKLLKFDSKDKIDVQANNQQNEETKPDNTQSESKPEE 1475
                    K+   ++ P  + S+       S+  I  ++     +E     ++ E+ P+ 
Sbjct: 88   --------KEIVHDLVPVASSSTVAGGSSVSEPAIAAESAGNSRQEDNVQLSEGETSPQT 139

Query: 1476 NNNEQTPSEAKTEESKPDNSSNEDTKQ----NESTEKQETENKIENKE 1519
              +E   S  +  + +P    +E   +      S+E  +T+  +E +E
Sbjct: 140  TPHEAKESMQRDSDVQPQYPQSEVLTEVADVEGSSESNDTQLPVEEEE 187



>EAY07673.1 on XP_808957   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1446

 Score = 30.4 bits (67), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 59/149 (39%), Gaps = 6/149 (4%)

Query: 1390 VVLDSASTTATNKTTKTEEEDHKEQEEKSNPENDKKP-EPE-VHPTPNQSSEKLLKFDSK 1447
              L+++S  +    +K  E    E E         KP EP+   P P +      K    
Sbjct: 738  TTLNASSVPSGGAPSKPAEPKSAEPEPAEPKSAGPKPAEPKSAEPKPAEPKSAEPKPAEP 797

Query: 1448 DKIDVQANNQQNEETKPDNTQS-ESKP-EENNNEQTPSEAKTEESKPDNSSNEDTKQNE- 1504
                 +    ++ E KP   +S E KP E  + E  P+E K+ E KP    + + K  E 
Sbjct: 798  KSAGPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPEPAEPKSAEPKPAEPKSAEPKPAEP 857

Query: 1505 -STEKQETENKIENKEDVKPSTDENKPEE 1532
             S E +  E K    E  +P + E KP E
Sbjct: 858  KSAEPKPAEPKSAEPEPAEPKSAEPKPAE 886




 Score = 30.0 bits (66), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 4/79 (5%)

Query: 1458 QNEETKPDNTQS-ESKP-EENNNEQTPSEAKTEESKPDNSSNEDTKQNE--STEKQETEN 1513
            ++ E KP   +S E KP E  + E  P+E K+ E KP    + + K  E  S E +  E 
Sbjct: 958  KSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEP 1017

Query: 1514 KIENKEDVKPSTDENKPEE 1532
            K    E  +P + E KP E
Sbjct: 1018 KSAEPEPAEPKSAEPKPAE 1036




 Score = 28.9 bits (63), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 5/102 (4%)

Query: 1434 PNQSSEKLLKFDSKDKIDVQANNQQNEETKPDNTQSESKP-EENNNEQTPSEAKTEESKP 1492
            P  +  K  +  S +    +  + + E  +P +  +E KP E  + E  P+E K+ E KP
Sbjct: 807  PKSAEPKPAEPKSAEPKPAEPKSAEPEPAEPKS--AEPKPAEPKSAEPKPAEPKSAEPKP 864

Query: 1493 --DNSSNEDTKQNESTEKQETENKIENKEDVKPSTDENKPEE 1532
                S+  +  + +S E +  E K    E  +P + E KP E
Sbjct: 865  AEPKSAEPEPAEPKSAEPKPAEPKSAEPEPAEPKSAEPKPAE 906




 Score = 28.1 bits (61), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 4/79 (5%)

Query: 1458 QNEETKPDNTQS-ESKP-EENNNEQTPSEAKTEESKPDNSSNEDTKQNE--STEKQETEN 1513
            ++ E KP   +S E KP E  + E  P+E K+ E KP    + + K  E  S E +  E 
Sbjct: 968  KSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPEPAEP 1027

Query: 1514 KIENKEDVKPSTDENKPEE 1532
            K    +  +P + E KP E
Sbjct: 1028 KSAEPKPAEPKSAEPKPAE 1046




 Score = 27.3 bits (59), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 4/79 (5%)

Query: 1458 QNEETKPDNTQS-ESKP-EENNNEQTPSEAKTEESKP--DNSSNEDTKQNESTEKQETEN 1513
            ++ E KP   +S E KP E  + E  P+E K+ E KP    S+  +  + +S E +  E 
Sbjct: 848  KSAEPKPAEPKSAEPKPAEPKSAEPEPAEPKSAEPKPAEPKSAEPEPAEPKSAEPKPAEP 907

Query: 1514 KIENKEDVKPSTDENKPEE 1532
            K    +  +P + E KP E
Sbjct: 908  KSAEPKPAEPKSAEPKPAE 926



>EAY07673.1 on XP_810140   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 923

 Score = 29.3 bits (64), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 2/54 (3%)

Query: 1458 QNEETKPDNTQSES-KPEENNNEQ-TPSEAKTEESKPDNSSNEDTKQNESTEKQ 1509
            ++EE KP  ++SE  KP E+ +E+  P E+++EE KP   +   +   E T  Q
Sbjct: 756  ESEEPKPAESESEEPKPAESESEEPKPVESESEEPKPAEPNAATSSAREGTADQ 809




 Score = 28.5 bits (62), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 8/59 (13%)

Query: 1481 TPSEAKTEESKPDNSSNEDTKQNESTEKQETENKIENKEDVKPSTDENKPEEENTKTQA 1539
            TP+ +++EE KP         ++ES E +  E++ E  + V+  ++E KP E N  T +
Sbjct: 751  TPAVSESEEPKP--------AESESEEPKPAESESEEPKPVESESEEPKPAEPNAATSS 801



>EAY07673.1 on XP_814930   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 938

 Score = 28.9 bits (63), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 32/150 (21%), Positives = 58/150 (38%), Gaps = 26/150 (17%)

Query: 1342 PLPEGENNEEMNEEFVDDQEKDKDEKKDEKEAKEEEEKNENLPDLKELVVLDSASTTATN 1401
            PL  GE   +M +E  D +EK   + +D+KE+ + E+K E+          DS     + 
Sbjct: 749  PLSVGE--LKMIKEVEDKKEKGSGDSEDKKESGDSEDKKES---------GDSEDKKGSG 797

Query: 1402 KTTKTEEEDHKEQEEKSNPENDKKPEPEVHPTP---------------NQSSEKLLKFDS 1446
             +   +E    E +++S    DKK   +   TP               NQS+        
Sbjct: 798  DSEDKKESGDSEDKKESGDSEDKKGSGDGAFTPAVSNATTHTAEEETVNQSASGTFSITD 857

Query: 1447 KDKIDVQANNQQNEETKPDNTQSESKPEEN 1476
              + DV ++         D  + + +P++ 
Sbjct: 858  STEGDVSSDENGETTGGADGQEEDIQPQDG 887



>EAY07673.1 on XP_818848   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1053

 Score = 28.1 bits (61), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 1457 QQNEETKPDNTQSESKPEENNNEQTPSEAKTEESKPDNSSNEDTKQNEST 1506
            Q+  E +P + QSE   E N+ E +P    TEE + D  +N+ +  + S+
Sbjct: 827  QRGSELQPQDLQSEKLTEFNDVETSPESIDTEEPEEDGGTNDRSGGSTSS 876




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07675.1 hypothetical protein TVAG_273590 [Trichomonas
vaginalis G3]
         (112 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_805359   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   2.0  
XP_804895   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   2.1  

>EAY07675.1 on XP_805359   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 788

 Score = 24.3 bits (51), Expect = 2.0,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 20/49 (40%)

Query: 35  FKDDREMKEIVTALFPHLKSRPEYSHEPQELEPPQVLCSNFGQPESSSP 83
           F  +R +     A     K  P+   EPQ  + PQ + S    PE  +P
Sbjct: 677 FLYNRPLNPTEMAAIKDRKPVPKRVPEPQAGDVPQTIASAVSGPEYLAP 725



>EAY07675.1 on XP_804895   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 787

 Score = 24.3 bits (51), Expect = 2.1,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 21/52 (40%)

Query: 35  FKDDREMKEIVTALFPHLKSRPEYSHEPQELEPPQVLCSNFGQPESSSPESA 86
           F  +R +     A     K  P+   EPQ  + PQ +      PE +S  SA
Sbjct: 676 FLYNRPLNPTEMAAIKDRKPVPKRVSEPQAGDVPQTIAPAVPGPEKNSAASA 727




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07677.1 hypothetical protein TVAG_273610 [Trichomonas
vaginalis G3]
         (94 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07678.1 hypothetical protein TVAG_273620 [Trichomonas
vaginalis G3]
         (320 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07679.1 hypothetical protein TVAG_273630 [Trichomonas
vaginalis G3]
         (156 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAM47174  Rh4  (Adhesin)  [Plasmodium falciparum]                      23   7.1  
AAM47192  Rh4  (Adhesin)  [Plasmodium falciparum]                      23   7.5  

>EAY07679.1 on AAM47174  Rh4  (Adhesin)  [Plasmodium falciparum]
          Length = 1711

 Score = 23.5 bits (49), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 21/29 (72%)

Query: 70  LREYTNEYYYSIQKTLEVAEEKMTKTINN 98
           L +YTN++ ++I+  +E  E+K+ + INN
Sbjct: 241 LEKYTNKFEHNIKPHIEDIEKKVNEYINN 269



>EAY07679.1 on AAM47192  Rh4  (Adhesin)  [Plasmodium falciparum]
          Length = 1716

 Score = 23.5 bits (49), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 21/29 (72%)

Query: 70  LREYTNEYYYSIQKTLEVAEEKMTKTINN 98
           L +YTN++ ++I+  +E  E+K+ + INN
Sbjct: 241 LEKYTNKFEHNIKPHIEDIEKKVNEYINN 269




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07681.1 U1 zinc finger family protein [Trichomonas
vaginalis G3]
         (593 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001348165  RESA  (Others)  [plasmodium falciparum]                  41   2e-04
XP_813500   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           33   0.051
XP_811897   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.53 
XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 27   4.8  

>EAY07681.1 on XP_001348165  RESA  (Others)  [plasmodium falciparum]
          Length = 1085

 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 5/91 (5%)

Query: 9   TDYYELLGVTESATEEELKRAYRKAAMKWHPDRNHGNEVEATRVFQLIEHAYSILSDNQE 68
           T YY++LGV  +A   E+   Y K A  ++P +  G+ V     F+ +  AY +L D  +
Sbjct: 522 TLYYDILGVGVNADMNEITERYFKLAENYYPYQRSGSTVFHN--FRKVNEAYQVLGDIDK 579

Query: 69  RAWYDDHRNFNYDEQGEMVATNVDIYGLFKA 99
           + WY+    + YD   ++   N  I+ L  +
Sbjct: 580 KRWYN---KYGYDGIKQVNFMNPSIFYLLSS 607



>EAY07681.1 on XP_813500   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 898

 Score = 33.1 bits (74), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 3/48 (6%)

Query: 212 RITAEVKRREELLRKKKEEDERKREEKRRRDAEEIERITREHAQKPEF 259
           R+TA+++R +++L   KE D+R  +  R   +E +E I+ E+A  P F
Sbjct: 461 RLTAQLQRVKKVLTAWKEVDDRVSKLCR---SENVESISSENACSPTF 505



>EAY07681.1 on XP_811897   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 879

 Score = 29.6 bits (65), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 8/99 (8%)

Query: 325 TAFNFILLG--LDESEILAVDPNVDMNNLVSPRANKKKKPQRGQSQQLEAEDDEEEEEYE 382
           T  N +L    LDE+EI A++PN D  + V+P A K      G S  L+     E  +  
Sbjct: 702 TVTNVLLYNRPLDEAEITALNPNKDPTSPVTPNAQKA-----GTSSALDGSHLTERGQSM 756

Query: 383 QKGKKNKKGKNKNDDDDEDEKPKKGKNNNNKKGKNKNDD 421
                N  G + +        P  GK++  +    K+ D
Sbjct: 757 GSSGVNGGGASPSAVPTV-STPSAGKDSLQQVASGKSSD 794



>EAY07681.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 26.6 bits (57), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 59/105 (56%), Gaps = 19/105 (18%)

Query: 443  PLSKKERRKLK----MQKQQQKKIEQEKA-----AEKAKYADQPKLTKQEKKLRAMMEAR 493
             L ++E+ +L+    +++Q+Q+++E+EK       E+ K  +Q +L K+E   R   E  
Sbjct: 2738 ALKRQEQERLQKEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQER- 2796

Query: 494  KNALFDYSDFDEEEEPKKEEPKKEETAKKEEEEKNEETKKQEQDK 538
                       +EEE K++E ++ E  K+E+ +K EE K+QEQ++
Sbjct: 2797 ---------LQKEEELKRQEQERLEREKQEQLQKEEELKRQEQER 2832




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07684.1 Kinesin motor domain containing protein
[Trichomonas vaginalis G3]
         (679 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_813740   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           33   0.053
XP_001609667  variant erythrocyte surface antigen-1, alpha subun...    32   0.11 
XP_821084   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   0.87 
XP_001610714  variant erythrocyte surface antigen-1, alpha subun...    28   2.3  
XP_001609540  variant erythrocyte surface antigen-1, alpha subun...    28   2.4  
XP_803895   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   2.5  
XP_814225   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   2.6  
XP_806226   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   4.8  
XP_819966   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   7.0  
XP_808179   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   7.2  
XP_807476   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   9.1  

>EAY07684.1 on XP_813740   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 717

 Score = 33.1 bits (74), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 72/167 (43%), Gaps = 33/167 (19%)

Query: 238 LNLVDLAGSERV------AKTGAEGVGFTEGVNIN------YELMILGNCIAALTSKG-- 283
           L + + AG  +V       +T  E VG   GV IN      + + +    +   T +G  
Sbjct: 324 LMVAECAGGRKVYESLDMGRTWTEAVGTLPGVWINSRSGARWAIDLSVGSLTTATIEGVR 383

Query: 284 ---NTHIPYR-----DSKLTMLLRDSLGGNARTMMIAALGP--ADYNFSETMS-TLRYAE 332
               TH  YR     +  L + + D    N+R      LGP   + + SET+S TL Y+E
Sbjct: 384 VMLYTHKRYRTLEKREKALYLCVTD----NSRMFY---LGPIYVESSLSETVSNTLLYSE 436

Query: 333 RAKKIENKPTVNMDPKDALLLQLKNELEALESQINQKNQLDAQMGAT 379
            A +I  + T     K   L +L  ELE + S ++   +LDA   A+
Sbjct: 437 DALQIA-RFTYTGTSKAISLARLTKELETIRSVLSTWKKLDASFSAS 482



>EAY07684.1 on XP_001609667  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1303

 Score = 32.3 bits (72), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 74/188 (39%), Gaps = 23/188 (12%)

Query: 369 KNQLDAQMGATDDVIAAMEKKLEEEREAVAKQSNMAQKERDELMKKMEQRKKQIENEKEK 428
           K  LD   G  D     ++  LE+  E V +  N AQ+        +E+RK       E+
Sbjct: 646 KGVLDGVKGGGD--AGKLKDVLEKIGEVVVQLGN-AQE-------ALERRKG------EE 689

Query: 429 REGYQKKLDELKHALENSNTSQLIAKTAQNEQQIREAKAKLAAREEKAKKMMSELAESQA 488
            +G QKKL E K  LE +   +L      +E  ++EAK  L          +  LA    
Sbjct: 690 IKGVQKKLQEAKKGLEEAR-KELETGEDLDEDDLKEAKEALGELTNGGGGALHTLANGS- 747

Query: 489 KQDKVNAELHSMEQNMENVQAEYNQCVEIYKNLKIMMQEVPKTINADREQMSEHLLMLGK 548
                   LH +     + Q EY+   +    +   +QEV   +  +  Q+S HL   G 
Sbjct: 748 ---NTAGSLHQVATAGADWQKEYSSAKDKISEVIHKIQEVLTALQTEVPQVSSHL--NGH 802

Query: 549 KSDFYSQI 556
           K +F   I
Sbjct: 803 KDEFTKAI 810



>EAY07684.1 on XP_821084   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 965

 Score = 29.3 bits (64), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 10/69 (14%)

Query: 573 AEYDEETNTWSVKPMDKKKMVAQVLAQERPKSAYGCPRPIAQINQANKALTKTFEESSVV 632
           +E  E T+  + K +DK KM  QVL  E P    GCP         ++A+ ++  ES   
Sbjct: 127 SELLEWTDKQTSKELDKNKMKTQVLG-ECPSGKEGCP---------DQAVDRSGFESGAP 176

Query: 633 VNIPNPQPV 641
           V++  P  V
Sbjct: 177 VHVDKPTTV 185



>EAY07684.1 on XP_001610714  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1231

 Score = 28.1 bits (61), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 26/141 (18%)

Query: 410 ELMKKMEQRKKQIENEKEKREGYQKK-LDELKHALENSNTSQLIAKTAQNEQQIREAKAK 468
           EL++++ +   Q+ N +E  EG +KK +  +K  LE        AK A     +  AK K
Sbjct: 602 ELLQRIGEVVVQLGNAQEALEGKEKKAIQGVKRELEK-------AKGA-----LDTAKGK 649

Query: 469 LAAREEKAKKMMSELAESQAK----QDKVNAELHSMEQNMENVQAEYNQCVE----IYKN 520
           L    EKAKK + +L  +       ++ V+A +   + ++ NV    N   E    I + 
Sbjct: 650 L----EKAKKALEKLTTNGGGGGILKNVVDA-IGKAQSDVTNVDPGKNAISEGVHKIREV 704

Query: 521 LKIMMQEVPKTINADREQMSE 541
           LKI+ +EVP+ I+   ++M +
Sbjct: 705 LKILKEEVPEAIDKAIDEMKQ 725




 Score = 26.6 bits (57), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 18/72 (25%), Positives = 36/72 (50%)

Query: 377 GATDDVIAAMEKKLEEEREAVAKQSNMAQKERDELMKKMEQRKKQIENEKEKREGYQKKL 436
           G + D+  A+++ L+   E V +  N  +    +  K ++  K+++E  K   +  + KL
Sbjct: 591 GTSGDLPGALKELLQRIGEVVVQLGNAQEALEGKEKKAIQGVKRELEKAKGALDTAKGKL 650

Query: 437 DELKHALENSNT 448
           ++ K ALE   T
Sbjct: 651 EKAKKALEKLTT 662



>EAY07684.1 on XP_001609540  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1349

 Score = 27.7 bits (60), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 11/111 (9%)

Query: 418 RKKQIENEKEKREGYQKKLDELKHALENSNTSQLIAKTAQNEQQIREAKAKLAAREEKAK 477
           RK ++E  KE   G   KL  L+   E++     +       +++RE   KL    E   
Sbjct: 650 RKCRVEKVKEGLGGVVNKLKALEGEAESTGGINGV-------KELREGIEKLRDILEAIG 702

Query: 478 KMMSELAESQAKQDKVNAELHSMEQNMENVQAEYNQCVEIYKNLKIMMQEV 528
           +++ +L  +Q + D+ NA+L  +   ++ V+   N       + K ++QEV
Sbjct: 703 EVVVQLGNAQERLDRGNADLGGVMNALKKVEGVNNG----TNDFKGVLQEV 749



>EAY07684.1 on XP_803895   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 746

 Score = 27.7 bits (60), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 9/67 (13%)

Query: 84  EGYNGTIFAYGQTGTGKTFSMDGKPTGELRGIMPRAFDHIFEYIQANSADTEFLVTVTYV 143
           +G+ G+++  G+       S +  PT E+RG     F     Y   +  D++  VTVT V
Sbjct: 626 DGHKGSVYVDGEL----VGSSEAIPTLEMRGAEVTHF-----YFGGDEGDSDSNVTVTNV 676

Query: 144 EIYNNEL 150
            +YN+ L
Sbjct: 677 FLYNHPL 683



>EAY07684.1 on XP_814225   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 717

 Score = 27.7 bits (60), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 27/150 (18%)

Query: 249 VAKTGAEGVGFTEGVNIN------YELMILGNCIAALTSKG-----NTHIPYR-----DS 292
           + +T  E VG   GV +N      +++ +    +   T +G      TH  YR     + 
Sbjct: 341 MGRTWTEAVGTLPGVWVNPRSGARWDIDLSVGSLTTATIEGVRVMLYTHKRYRTLEKRER 400

Query: 293 KLTMLLRDSLGGNARTMMIAALGP--ADYNFSETM-STLRYAERAKKIENKPTVNMDPKD 349
            L + + D    N+R   I  LGP   +  F +T+   L Y+E A  I  + T     K 
Sbjct: 401 GLYLCVTD----NSR---IFCLGPIYVESFFIQTLEKALLYSEDALHIA-RFTYTGTSKA 452

Query: 350 ALLLQLKNELEALESQINQKNQLDAQMGAT 379
             L +L  ELE ++S ++   +LDA   A+
Sbjct: 453 ISLARLTKELETIKSVLSTWKKLDASFSAS 482



>EAY07684.1 on XP_806226   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 728

 Score = 26.9 bits (58), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 11/70 (15%)

Query: 84  EGYNGTIFAYGQ-TGTGKTFSMDGKPTGELRGIMPRAFDHIFEYIQANSADTEFLVTVTY 142
           +G  G+++  G+  G+ +T      PT E RG     F     Y   +  D++  VTVT 
Sbjct: 626 DGNKGSVYVDGELVGSPETI-----PTPEARGAEISHF-----YFGGDEGDSDSSVTVTN 675

Query: 143 VEIYNNELRD 152
           V +YN  L D
Sbjct: 676 VFLYNRPLSD 685



>EAY07684.1 on XP_819966   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 716

 Score = 26.2 bits (56), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 5/45 (11%)

Query: 108 PTGELRGIMPRAFDHIFEYIQANSADTEFLVTVTYVEIYNNELRD 152
           PT E RG     F     YI  +  D++  VTVT   +YN  L D
Sbjct: 642 PTPETRGAEITHF-----YIGGDEGDSDSSVTVTNFFLYNRPLSD 681



>EAY07684.1 on XP_808179   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 942

 Score = 26.2 bits (56), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 519 KNLKIMM-QEVPKTINADREQMSEHLLMLGKKSDFYSQIVDNFIPEGDV 566
           K  K++  +E PK +++  EQ + H+++L +     S  VD     GDV
Sbjct: 617 KKWKLLCGEEAPKELSSTSEQTTHHVVILLRNGSQGSAYVDGQRVGGDV 665



>EAY07684.1 on XP_807476   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 856

 Score = 25.8 bits (55), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 9/63 (14%)

Query: 126 YIQANSAD---TEFLVTVTYVEIYN-----NELRDLLSEKSN-EKLKIREDPTHGVQIKG 176
           YI  +S D   T   VTVT V +YN     NELR L + K     L + + PT     K 
Sbjct: 666 YIGGDSKDRSATGGHVTVTNVMLYNEELWGNELRKLNASKVTIPSLSVEKQPTEQAASKD 725

Query: 177 VAV 179
           V+V
Sbjct: 726 VSV 728




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07691.1 Adenylate kinase family protein [Trichomonas
vaginalis G3]
         (206 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_829796  VSG  (Establishment)  [Trypanosoma brucei]                  27   1.1  
XP_821669   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   1.5  

>EAY07691.1 on XP_829796  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 513

 Score = 26.6 bits (57), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 5/49 (10%)

Query: 126 PDEELKKRLLNRGLSSGRIDDNEESIKKRLVTYHNQTEAVIGKFRSENK 174
           PDEEL+    N G      DD  E ++  +     Q EA+I  FR++ K
Sbjct: 125 PDEELR----NSGFLKLNDDDKSE-VRAVMADVTRQAEALISHFRAQTK 168



>EAY07691.1 on XP_821669   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 879

 Score = 26.2 bits (56), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 22/48 (45%)

Query: 138 GLSSGRIDDNEESIKKRLVTYHNQTEAVIGKFRSENKIISVDGNHPID 185
           G ++ +I DN + +   L  Y  +TE V    + E  +   D  H +D
Sbjct: 345 GFTTAKIGDNRDVMLVTLPVYSKKTEGVSANGKGELHLWLTDNTHIVD 392




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07692.1 hypothetical protein TVAG_273760 [Trichomonas
vaginalis G3]
         (92 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001610721  variant erythrocyte surface antigen-1, alpha subun...    25   0.93 
XP_821084   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   6.7  
XP_001348176  PfEMP1  (Establishment)  [Plasmodium falciparum]         22   9.4  

>EAY07692.1 on XP_001610721  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1331

 Score = 24.6 bits (52), Expect = 0.93,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 2/51 (3%)

Query: 4   NFQESLRSLERQAFVRYSTVVDKNGYSISSSGEA--TKATAAYVREVHNCA 52
           N+   + +LE+ AF   +T+  KN    +S  E    K  A Y   + +CA
Sbjct: 412 NYAGYIHTLEKGAFCSNATIFHKNANGATSIAEENINKCGALYKLYILSCA 462



>EAY07692.1 on XP_821084   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 965

 Score = 22.3 bits (46), Expect = 6.7,   Method: Composition-based stats.
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 22  TVVDKNGYSISSSGEATKATAAYVREVHNCAREI 55
           TV  + G S   +GE T+ T     EVH   RE+
Sbjct: 887 TVNPEAGASSGENGEPTEETNGQEEEVHPQEREL 920



>EAY07692.1 on XP_001348176  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3119

 Score = 21.9 bits (45), Expect = 9.4,   Method: Composition-based stats.
 Identities = 8/23 (34%), Positives = 16/23 (69%)

Query: 58  TEDSIKIVIEGTKNAVTIGEQND 80
           T+D+IK++++  K   TI + N+
Sbjct: 692 TQDTIKVLLDHLKETATICKDNN 714




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07695.1 hypothetical protein TVAG_273790 [Trichomonas
vaginalis G3]
         (248 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609618  variant erythrocyte surface antigen-1, alpha subun...    25   5.2  
XP_001609566  variant erythrocyte surface antigen-1, beta subuni...    25   6.1  
XP_001351563  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   9.7  

>EAY07695.1 on XP_001609618  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1325

 Score = 25.0 bits (53), Expect = 5.2,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 36/72 (50%), Gaps = 3/72 (4%)

Query: 52  LEQQYLKERDEIKSIKNELGRLESRKLQLEKNLEKILRQYNENQTIEKNEEA---ATKQF 108
           LE+   K+  E+   KN++    ++ L++ K +EK L++  E +    +E       ++ 
Sbjct: 770 LEKATNKDGKEVDPGKNKISEAINKVLEMLKEMEKQLKEVLEKEQSNMDENTNLNGHEKG 829

Query: 109 YEKLIEKCTQLC 120
           + K I++   +C
Sbjct: 830 FHKAIKELISIC 841



>EAY07695.1 on XP_001609566  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 1062

 Score = 24.6 bits (52), Expect = 6.1,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 14/73 (19%)

Query: 62  EIKSIKNELGRLESRKLQL---------EKNLEKILRQYNENQTIEKNEEAATKQFYEKL 112
           +IK ++  LG+ E ++L L            + K L+ +N+  T EK+      +   K 
Sbjct: 763 KIKGVREALGK-EVKELSLYMDGNDDGDNTGVIKALKAWNKEGTCEKDSHTGVNEGSLKT 821

Query: 113 IEKCT----QLCP 121
           +  CT    Q CP
Sbjct: 822 LYGCTKGTGQCCP 834



>EAY07695.1 on XP_001351563  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2149

 Score = 24.3 bits (51), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 32/161 (19%)

Query: 11   LQKLQNENAELHARL-EQLKKQNLPSDEDNINNFQDIKDPRLLEQQYLKERDEIKSIKNE 69
            ++K +NE  E+  R  +Q KK+N      N+N+F +   P+               + N 
Sbjct: 1451 IEKKKNEWEEIKKRFNDQYKKENNEGTSSNLNSFLETLIPQT-------------DVDNV 1497

Query: 70   LGRLESRKLQLEKNLEKILRQYNENQTIEKNEEAATKQFYEKLIEKCTQLCPAQLDDLQK 129
            +G++        K L  +   Y+ N+ I+ +     +  Y  ++E         L  LQK
Sbjct: 1498 IGKV--------KTLSDL---YDSNECIDTDTSKKGQHEYNDVVE-------CLLYKLQK 1539

Query: 130  TIDNYTNTKAQVFNVREEYEKLQRMISFINSQKDDTNYVQV 170
             ID Y     +V +      K     ++  S +DDT+   V
Sbjct: 1540 KIDTYNTQTIEVTDPNSCVLKPTEDETYDESPEDDTSTTSV 1580




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07696.1 CAMK family protein kinase [Trichomonas
vaginalis G3]
         (407 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    68   1e-13

>EAY07696.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 68.2 bits (165), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/322 (23%), Positives = 134/322 (41%), Gaps = 72/322 (22%)

Query: 1   MDFRVLQNYAVLYPIGTGGFSKVYIAIHNATGSKVAIKIINKN------------ENNED 48
           + + V  +Y ++  IG G FS+V+  ++  T  K  IKI+               +N   
Sbjct: 47  LKWNVPDSYEIVRKIGRGKFSEVFEGLNTVTKDKCVIKILKPVKKKKIKREIKILQNLRG 106

Query: 49  GRQMIRIHREIEILKKVNHPFISHLFEVIESENEIYIVMEFAPNGTLLNYINEHGPLSEE 108
           G  +I++   ++I+K       S +FE + + +         P  T+           ++
Sbjct: 107 GPNIIKL---LDIVKDPQSRTPSLIFEHVNNTD----FKTLYPTLTI-----------QD 148

Query: 109 CAAPIFAQVMLALRYLHEDAHVCHRDIKAENIMFDYKRNV-RIIDFGLSNTPDAESVLRS 167
               I+ Q++ A+ Y H    + HRDIK  N+M D+++ + R+ID+GL+     E     
Sbjct: 149 IKYYIY-QLLKAMNYCHSQG-IMHRDIKPHNVMIDHEKKILRLIDWGLAEFYHPEQEYSV 206

Query: 168 QCGSPSYAAPEMIVGSD-YGYGCDVWSCGVVLYAMVVGHLPF------------------ 208
           +  +  Y  PE++V    Y Y  D+WS G +L  ++    PF                  
Sbjct: 207 RVATRYYKGPELLVDMRYYDYSLDIWSIGCMLAGIIFKKEPFFYGHDNYDQLVKIAKVLG 266

Query: 209 -EDAN--FQRLAQKIIYADPEIPSS-----------------LSPPLADLLRKMLAKCPD 248
            ED +  F++   K   A  EI  +                 +SP + DLL +ML     
Sbjct: 267 TEDLHRYFEKYGLKFAPAYQEILGNHSKKPWTKFVHHENQHLVSPEVMDLLDRMLVYDHT 326

Query: 249 QRLTDSQVLEHPWMIEAAKKAV 270
           +R+T  + +EHP+  E    +V
Sbjct: 327 KRITPLEAMEHPFFNEIKNNSV 348




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07697.1 hypothetical protein TVAG_273810 [Trichomonas
vaginalis G3]
         (164 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_804105   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   1.3  

>EAY07697.1 on XP_804105   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1017

 Score = 26.2 bits (56), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)

Query: 96  IRKRDNNSKFPLQYAVNDSRMFESLVFDYKKREKYYKL 133
           I+ RD    FP+Q   N      S+ FD  K EK ++L
Sbjct: 249 IKTRDGTLMFPMQATKNGKTSLLSMRFD--KSEKKWRL 284




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07698.1 hypothetical protein TVAG_273820 [Trichomonas
vaginalis G3]
         (105 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001350413  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   3.0  
XP_001610496  variant erythrocyte surface antigen-1, beta subuni...    22   9.8  

>EAY07698.1 on XP_001350413  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2860

 Score = 23.9 bits (50), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 8/24 (33%), Positives = 13/24 (54%)

Query: 77   EIPIDVDDCIRYDNIQAFLIHYDQ 100
            E P+D D+C +Y        HY++
Sbjct: 2071 ECPVDKDECKKYGRYSCRKNHYNK 2094



>EAY07698.1 on XP_001610496  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 1159

 Score = 22.3 bits (46), Expect = 9.8,   Method: Composition-based stats.
 Identities = 10/26 (38%), Positives = 16/26 (61%)

Query: 31  LQLSFLGGNPDIMSECLKCHKPDKEC 56
           ++LS LGG PD + + L+  K   +C
Sbjct: 882 VRLSMLGGGPDGVVKALEKWKNGGDC 907




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07699.1 hypothetical protein TVAG_273830 [Trichomonas
vaginalis G3]
         (390 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ABR92024  MSA-1  (Invasion)  [Babesia bovis]                           27   2.2  

>EAY07699.1 on ABR92024  MSA-1  (Invasion)  [Babesia bovis]
          Length = 330

 Score = 26.9 bits (58), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%)

Query: 5   FDEGNEH---DFLCHELKNIEKYLASVSSILSQLSELQIPTFKDNNEVPG 51
           FD+G  H   D       N+E     VS+I   +++++ PT  +N E+P 
Sbjct: 203 FDKGKYHGRIDNFAEPKNNVEAPKELVSAIEEAVAKIKAPTNPENTELPA 252




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07703.1 hypothetical protein TVAG_117840 [Trichomonas
vaginalis G3]
         (216 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_812339   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   1.9  
XP_001349514  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   6.5  
XP_803096   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   7.5  
XP_816181   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   7.9  

>EAY07703.1 on XP_812339   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 949

 Score = 26.2 bits (56), Expect = 1.9,   Method: Composition-based stats.
 Identities = 11/23 (47%), Positives = 16/23 (69%)

Query: 127 NLDIHTENSIFKAIMYNDKEKFI 149
           N D +TENS+   + YN K+K+I
Sbjct: 605 NGDENTENSVLLGLSYNKKKKWI 627



>EAY07703.1 on XP_001349514  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2120

 Score = 24.6 bits (52), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 11/30 (36%), Positives = 17/30 (56%)

Query: 142 YNDKEKFISFTEREGLDENQKLVSNLYPDS 171
           Y D E+F+    REG+ ++Q  V N   D+
Sbjct: 432 YGDVEQFLEKLSREGICQSQPTVGNQKADA 461



>EAY07703.1 on XP_803096   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 753

 Score = 24.3 bits (51), Expect = 7.5,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 10/80 (12%)

Query: 33  TEIEEELKSIHKMIKT----ELIDSKKFLPANVVKDILNIIPYNNRYTKSYLFL------ 82
           + + EELK+I+ ++KT    +   SK  +P   +  +L+    ++ ++  YL L      
Sbjct: 461 SRLSEELKTINSVLKTWAQNDAFFSKLSIPTAGLVAVLSDAASDDTWSDEYLCLNATVTN 520

Query: 83  AKLISDDYHVTEVSNVAIVP 102
           A  + D   +TE  + A+ P
Sbjct: 521 ATKVKDGLKLTEPDSRAMWP 540



>EAY07703.1 on XP_816181   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 967

 Score = 24.3 bits (51), Expect = 7.9,   Method: Composition-based stats.
 Identities = 9/19 (47%), Positives = 14/19 (73%)

Query: 131 HTENSIFKAIMYNDKEKFI 149
           +TENS+   + YN K+K+I
Sbjct: 626 NTENSVLLGLSYNKKKKWI 644




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07710.1 alcohol dehydrogenase, iron-containing family
protein [Trichomonas vaginalis G3]
         (392 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_810285   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.88 
XP_806541   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   1.4  
XP_804884   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.0  
XP_806961   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.0  
XP_818353   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.6  
XP_819530   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   3.5  
XP_819216   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   7.1  

>EAY07710.1 on XP_810285   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 190

 Score = 27.7 bits (60), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 14/38 (36%), Positives = 21/38 (55%)

Query: 143 TGSEWNNGSVVSRRSTHEKLGMLILYPSFSLLDPLYTM 180
           T S+WN  +V  R +  + LGM IL  S S  + L+ +
Sbjct: 124 TSSKWNAHTVFDRETPKDGLGMAILPTSLSKGNELFLL 161



>EAY07710.1 on XP_806541   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 753

 Score = 27.7 bits (60), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 30/78 (38%), Gaps = 14/78 (17%)

Query: 6   NNTTRVGFGQHCVEEHFKDFVKPNSRVLVTFGGGSIDKNGARADVTKALAELHCETIWEG 65
           N T  V       E     FV P+   LV+ GG           V  A AE H ET ++G
Sbjct: 47  NQTLVVSKDGRSQETKRDAFVSPS---LVSAGG-----------VIAAFAEGHMETKYQG 92

Query: 66  GIPPNPEYDRLIEIVKVA 83
           G    P  D + E +  A
Sbjct: 93  GQSTKPSSDVVAEYIDSA 110



>EAY07710.1 on XP_804884   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 732

 Score = 26.9 bits (58), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 14/38 (36%), Positives = 21/38 (55%)

Query: 143 TGSEWNNGSVVSRRSTHEKLGMLILYPSFSLLDPLYTM 180
           T S+WN  +V  R +  + LGM IL  S S  + L+ +
Sbjct: 162 TSSKWNAHTVFDRETPKDGLGMAILPTSLSKGNELFLL 199



>EAY07710.1 on XP_806961   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 702

 Score = 26.9 bits (58), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 14/38 (36%), Positives = 21/38 (55%)

Query: 143 TGSEWNNGSVVSRRSTHEKLGMLILYPSFSLLDPLYTM 180
           T S+WN  +V  R +  + LGM IL  S S  + L+ +
Sbjct: 162 TSSKWNAHTVFDRETPKDGLGMAILPTSLSKGNELFLL 199



>EAY07710.1 on XP_818353   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 903

 Score = 26.9 bits (58), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 10/69 (14%)

Query: 34  VTFGGGSIDKNGARADVTKALAELHCETIWEGGIPPNPEYDRLIEIVKVAKAFKPDLLLA 93
           +T  G S+  +GA +D   A A     T       P+ E +    +V+V     PD    
Sbjct: 775 LTEQGQSMGSSGAGSDGASASAVSTVST-------PSAEEE---SVVQVTSGTSPDGTQT 824

Query: 94  VGGGSILDG 102
           VGGGS  DG
Sbjct: 825 VGGGSTADG 833



>EAY07710.1 on XP_819530   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 904

 Score = 26.2 bits (56), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 10/69 (14%)

Query: 34  VTFGGGSIDKNGARADVTKALAELHCETIWEGGIPPNPEYDRLIEIVKVAKAFKPDLLLA 93
           +T  G S+  +GA +D   A A     T       P+ E +    +V+V     PD    
Sbjct: 776 LTEQGQSMGSSGAGSDGASASAVSTVST-------PSAEEES---VVQVTSGTSPDGTKT 825

Query: 94  VGGGSILDG 102
           VGGGS  DG
Sbjct: 826 VGGGSTADG 834



>EAY07710.1 on XP_819216   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 482

 Score = 25.4 bits (54), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query: 143 TGSEWNNGSVVSRRSTHEKLGMLILYPSFSLLDPLYTM 180
           T S+WN  +V  R +  + LG+ IL  S S  + L+ +
Sbjct: 124 TSSKWNAHTVFERETPKDGLGIAILPTSLSKGNELFLL 161




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07713.1 hypothetical protein TVAG_117940 [Trichomonas
vaginalis G3]
         (412 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_966307  PfEMP1  (Establishment)  [Plasmodium falciparum]            30   0.41 
XP_001351080  PfEMP1  (Establishment)  [Plasmodium falciparum]         30   0.44 
XP_001350796  PfEMP1  (Establishment)  [Plasmodium falciparum]         29   0.71 
XP_654336  Lgl3  (Adhesin)  [Entamoeba histolytica]                    27   2.2  
XP_001349514  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   2.3  
XP_001349031  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   3.8  
XP_001349032  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   8.9  

>EAY07713.1 on XP_966307  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2238

 Score = 29.6 bits (65), Expect = 0.41,   Method: Composition-based stats.
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)

Query: 13   DTPLDSPSRMDIPVSPRSNPPPLTSSSIKAIKE 45
            DTP ++PS  DIP +P   PPP+T      +K+
Sbjct: 1907 DTP-NTPS--DIPKTPSDTPPPITDDEWNTLKD 1936



>EAY07713.1 on XP_001351080  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2209

 Score = 29.6 bits (65), Expect = 0.44,   Method: Composition-based stats.
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)

Query: 13   DTPLDSPSRMDIPVSPRSNPPPLTSSSIKAIKE 45
            DTP ++PS  DIP +P   PPP+T      +K+
Sbjct: 1899 DTP-NTPS--DIPKTPSDTPPPITDDEWNTLKD 1928



>EAY07713.1 on XP_001350796  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2646

 Score = 28.9 bits (63), Expect = 0.71,   Method: Composition-based stats.
 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 3/32 (9%)

Query: 13   DTPLDSPSRMDIPVSPRSNPPPLTSSSIKAIK 44
            DTP ++PS  DIP +P   PPP+T      +K
Sbjct: 2321 DTP-NTPS--DIPKTPSDTPPPITDEEWNQLK 2349



>EAY07713.1 on XP_654336  Lgl3  (Adhesin)  [Entamoeba histolytica]
          Length = 294

 Score = 26.9 bits (58), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 3/65 (4%)

Query: 180 LIDELLVLRSLPESEIKDYHSPLINLILPDNRDLIKALKEKVHIFPRIGSDLQKLLIKYR 239
           ++ ELL++RSL    IKD    LI+L+L     +IK   ++++    +G D+  LL+   
Sbjct: 216 IVVELLLIRSLNGLHIKDIFIFLIDLMLI---FVIKQRVQQIYHLNGMGIDILILLVIVI 272

Query: 240 RHKSQ 244
           R + Q
Sbjct: 273 RLQHQ 277



>EAY07713.1 on XP_001349514  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2120

 Score = 26.9 bits (58), Expect = 2.3,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)

Query: 13   DTPLDSPSRMDIPVSPRSNPPPLTSSSIKAIKE 45
            D   D PS  DIP +P   PPP+T      +K+
Sbjct: 1786 DIQNDIPS--DIPKTPSDTPPPITDDEWNQLKD 1816



>EAY07713.1 on XP_001349031  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2275

 Score = 26.6 bits (57), Expect = 3.8,   Method: Composition-based stats.
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 2/29 (6%)

Query: 17   DSPSRMDIPVSPRSNPPPLTSSSIKAIKE 45
            D PS  DIP +P   PPP+T      +K+
Sbjct: 1938 DIPS--DIPNTPSDTPPPITDDEWNQLKK 1964



>EAY07713.1 on XP_001349032  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2267

 Score = 25.4 bits (54), Expect = 8.9,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 7/51 (13%)

Query: 13   DTPLDSPS---RMDIPVSPRSNPPPLTSSSIKAIKELSQDHFQINSIKSYQ 60
            DT  D PS     DIP +P   P P+T      +K    D F  N +++ Q
Sbjct: 1893 DTQNDIPSGDINSDIPNTPSDTPSPITDEEWNTLK----DDFISNMLQNEQ 1939




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07714.1 hypothetical protein TVAG_117950 [Trichomonas
vaginalis G3]
         (220 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07715.1 hypothetical protein TVAG_117960 [Trichomonas
vaginalis G3]
         (216 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_965997  PfEMP1  (Establishment)  [Plasmodium falciparum]            28   0.47 
XP_954179  TashAT2  (Establishment)  [Theileria annulata]              25   4.1  
XP_954175  TashAT3  (Establishment)  [Theileria annulata]              25   5.3  
XP_807541   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   6.1  

>EAY07715.1 on XP_965997  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2879

 Score = 28.1 bits (61), Expect = 0.47,   Method: Composition-based stats.
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 7/61 (11%)

Query: 106  QYAARQMMKQHAMDDSDVMIARY------SSRPSNSPEEQIRKQKVDGSWDDFNGVDEII 159
            QY     M +  MD  D+   +       SS   NS +E I K K++G+  DFN ++ I 
Sbjct: 2323 QYIGWNTMVKQYMDGFDIKFQKVKNASTNSSISENSAQEYI-KGKIEGNECDFNDMENIY 2381

Query: 160  E 160
            E
Sbjct: 2382 E 2382



>EAY07715.1 on XP_954179  TashAT2  (Establishment)  [Theileria annulata]
          Length = 1161

 Score = 25.0 bits (53), Expect = 4.1,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 9/51 (17%)

Query: 22  KQFNAKPM----MRGMSQPGGGMGFGAPPPP-----PPCGAAMVPPHLANQ 63
           K+F ++P+        +  G   G GAPPPP     P  G    PP   +Q
Sbjct: 534 KRFRSEPLESHEQEDTTDAGVSSGAGAPPPPGDGSEPSDGPGDCPPPEQDQ 584



>EAY07715.1 on XP_954175  TashAT3  (Establishment)  [Theileria annulata]
          Length = 994

 Score = 24.6 bits (52), Expect = 5.3,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 9/51 (17%)

Query: 22  KQFNAKPM----MRGMSQPGGGMGFGAPPPP-----PPCGAAMVPPHLANQ 63
           K+F ++P+        +  G   G GAPPPP     P  G    PP   +Q
Sbjct: 516 KRFRSEPLESHEQEDTTDAGVSSGAGAPPPPGDGSEPSDGPGDCPPPEQDQ 566



>EAY07715.1 on XP_807541   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 920

 Score = 24.6 bits (52), Expect = 6.1,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 36/97 (37%), Gaps = 10/97 (10%)

Query: 16  CYAAPPKQFNAKPMMRGMSQPGGGMGFGAPP------PPPPCGAAMVPPHLANQMMQQMM 69
           C AA   Q  A+    G+  P GG G G  P       PP  G     PHL N     + 
Sbjct: 58  CGAAGSVQ--AQSFGTGVGNPYGGQGSGLLPRGHQAANPPVPGHIFRNPHLVNVDGMLLA 115

Query: 70  SGASQYTTPAPPQYDANQMMQQMM--SGVSQYTAPAP 104
              +Q+         + Q+  Q+    GV+  + P P
Sbjct: 116 IAGAQFNRTVGSGSASMQLTAQLSLNRGVNWSSYPRP 152




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07718.1 hypothetical protein TVAG_117990 [Trichomonas
vaginalis G3]
         (210 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_821902   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   0.67 
XP_819146   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.4  
XP_001351515  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   1.4  
XP_806412   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   1.9  
XP_816233   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   2.2  
XP_810753   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   4.8  
XP_821548   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   4.8  
XP_001350796  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   5.1  
XP_805179   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   5.8  

>EAY07718.1 on XP_821902   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 854

 Score = 27.3 bits (59), Expect = 0.67,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 19/97 (19%)

Query: 119 DFGKMTQDDLDIHAKFPLFKSIMDNDLGVFISFTEREGFDENKKLVSNLYPDSGK----- 173
           D G ++++D D+   F L+KS    D           G +E +KL++ LY    K     
Sbjct: 423 DIGPVSEEDDDVTTSFLLYKSAGSGD-----------GDNEGEKLIA-LYEKKKKVNHEL 470

Query: 174 GYSLLELCCYHGAVDCFKFLRT--KYDSEITQTCLQL 208
            Y ++ +C         + L T  K D  ++Q C  L
Sbjct: 471 SYGMVTVCLTAQLQRVKEVLTTWKKVDERVSQLCTTL 507



>EAY07718.1 on XP_819146   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 825

 Score = 26.6 bits (57), Expect = 1.4,   Method: Composition-based stats.
 Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 119 DFGKMTQDDLDIHAKFPLFKSIMDNDLGVFISFTEREGFDENKKLVSNL 167
           D G ++ DD D+ A   L+KS  +ND    I+  E++  + +  +VS L
Sbjct: 396 DIGSVSSDD-DVAASSLLYKSGNNNDEEELITLYEKKKGESSSGMVSVL 443



>EAY07718.1 on XP_001351515  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2181

 Score = 26.6 bits (57), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 12/38 (31%), Positives = 18/38 (47%)

Query: 173 KGYSLLELCCYHGAVDCFKFLRTKYDSEITQTCLQLSF 210
           +G +  +  C    +DC K +R KY   I   C + SF
Sbjct: 332 RGENGTDRYCSGNGLDCTKTIRAKYIYAIGSECTKCSF 369



>EAY07718.1 on XP_806412   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 619

 Score = 25.8 bits (55), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 13/43 (30%), Positives = 25/43 (58%)

Query: 118 SDFGKMTQDDLDIHAKFPLFKSIMDNDLGVFISFTEREGFDEN 160
           +D G ++ +D D+ A   L+KS  +N+    I+  E++G  E+
Sbjct: 190 ADIGPVSGNDNDVAASSLLYKSGGNNNNEKLIALYEKKGGGES 232



>EAY07718.1 on XP_816233   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 851

 Score = 25.8 bits (55), Expect = 2.2,   Method: Composition-based stats.
 Identities = 10/26 (38%), Positives = 16/26 (61%)

Query: 119 DFGKMTQDDLDIHAKFPLFKSIMDND 144
           D G ++++D D+   F L+KS   ND
Sbjct: 423 DIGPVSEEDDDVTTSFLLYKSAESND 448



>EAY07718.1 on XP_810753   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 955

 Score = 24.6 bits (52), Expect = 4.8,   Method: Composition-based stats.
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 119 DFGKMTQDDLDIHAKFPLFKSIMDND 144
           D G ++ DD D+ A   L+KS  DN+
Sbjct: 467 DIGSVSGDDEDVAASSLLYKSGKDNN 492



>EAY07718.1 on XP_821548   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 958

 Score = 24.6 bits (52), Expect = 4.8,   Method: Composition-based stats.
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 119 DFGKMTQDDLDIHAKFPLFKSIMDND 144
           D G ++ DD D+ A   L+KS  DN+
Sbjct: 470 DIGSVSGDDEDVAASSLLYKSGKDNN 495



>EAY07718.1 on XP_001350796  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2646

 Score = 24.6 bits (52), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 182 CYHGAVDCFKFLRTKYDSEITQTCLQLSF 210
           C     DC K +R KY   I   C + SF
Sbjct: 342 CSGDGFDCTKTIRAKYIYAIGDECTKCSF 370



>EAY07718.1 on XP_805179   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 793

 Score = 24.6 bits (52), Expect = 5.8,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 23/39 (58%)

Query: 118 SDFGKMTQDDLDIHAKFPLFKSIMDNDLGVFISFTEREG 156
           +D G ++ +D D+ A   L+KS  +N+    I+  E++G
Sbjct: 413 ADIGPVSGNDNDVAASSLLYKSGGNNNNEKLIALYEKKG 451




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07720.1 hypothetical protein TVAG_118010 [Trichomonas
vaginalis G3]
         (538 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001348015  AMA-1  (Invasion)  [Plasmodium falciparum]               27   3.7  
XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]                 27   4.6  

>EAY07720.1 on XP_001348015  AMA-1  (Invasion)  [Plasmodium falciparum]
          Length = 622

 Score = 26.9 bits (58), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 16/68 (23%), Positives = 27/68 (39%)

Query: 167 EILKQRNIDFSEAQQKMQQLVSDEQKYINSKNTLEENLDDLDARRHQTQQILTDPIDNLD 226
           + LK     F   +  M  +  DE ++    N   +NLD+L         ++ D   N +
Sbjct: 174 QYLKDGGFAFPPTEPLMSPMTLDEMRHFYKDNKYVKNLDELTLCSRHAGNMIPDNDKNSN 233

Query: 227 YEESIVAD 234
           Y+   V D
Sbjct: 234 YKYPAVYD 241



>EAY07720.1 on XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]
          Length = 2112

 Score = 26.6 bits (57), Expect = 4.6,   Method: Composition-based stats.
 Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 9/95 (9%)

Query: 46  KKSRLNAAVRDLNSKLESMKKANKIQKIQQNEIEKSLRIRRKK-------FEENNSSYEK 98
           +K  L   + DL     S KK   IQ +Q      S    RK+       F + N SYE 
Sbjct: 630 EKGTLQTKINDLKRDYRSGKKTYIIQALQYALTYYSKLSNRKEAPKVTMLFTDGNDSYES 689

Query: 99  AKD-QYIASSKKAERVKTIIEKIKTELQ-KAKILI 131
            K  Q IA   + E VK ++  + T  + K K+L+
Sbjct: 690 EKGLQDIALLYRKENVKLLVVGVSTASENKLKMLV 724




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07721.1 hypothetical protein TVAG_118020 [Trichomonas
vaginalis G3]
         (207 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAW78132  TRAP  (Invasion)  [Plasmodium falciparum]                    25   3.9  
AAW78177  TRAP  (Invasion)  [Plasmodium falciparum]                    25   4.7  
XP_804506   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   5.5  
AAW78156  TRAP  (Invasion)  [Plasmodium falciparum]                    24   9.9  

>EAY07721.1 on AAW78132  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 25.0 bits (53), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 3/55 (5%)

Query: 122 PNSLDSFSTPKSNSISDFPSTTTNI---SERSVGALVTNARTGGTTVSFQAPKQP 173
           PN  D    P++ S  D P    NI   SE+ V + V          +F  PK+P
Sbjct: 340 PNGFDLDENPENPSNPDIPEQEPNIPEDSEKEVPSDVPKNPEDDREENFDIPKKP 394



>EAY07721.1 on AAW78177  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 24.6 bits (52), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 3/55 (5%)

Query: 122 PNSLDSFSTPKSNSISDFPSTTTNI---SERSVGALVTNARTGGTTVSFQAPKQP 173
           PN  D    P++ S  D P    NI   SE+ V + V          +F  PK+P
Sbjct: 340 PNGFDLDENPENPSNPDIPEQEPNIPEDSEKEVPSDVPKNPEDDREENFDIPKKP 394



>EAY07721.1 on XP_804506   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1012

 Score = 24.6 bits (52), Expect = 5.5,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 14/27 (51%)

Query: 32  TNNTANWTEPAEIKCMIAAVATDKHPH 58
           TNN+ +   P    CM+  VA  K PH
Sbjct: 246 TNNSTHTHRPHTHICMLTRVAAVKAPH 272



>EAY07721.1 on AAW78156  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 581

 Score = 23.9 bits (50), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 3/62 (4%)

Query: 115 NTSASGQPNSLDSFSTPKSNSISDFPSTTTNI---SERSVGALVTNARTGGTTVSFQAPK 171
           N S    P++ ++ S P++ S  D P    NI   SE+ V + V          +F  PK
Sbjct: 375 NPSNPENPSNPENPSNPENPSNPDIPEQKPNIPEDSEKEVPSDVPKNPEDDREENFDIPK 434

Query: 172 QP 173
           +P
Sbjct: 435 KP 436




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07722.1 hypothetical protein TVAG_118030 [Trichomonas
vaginalis G3]
         (559 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CAB92983  SBP1  (Others)  [Plasmodium falciparum]                      38   0.001
XP_001349207  EBA-175  (Adhesin)  [Plasmodium falciparum]              29   0.93 
XP_807593   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   1.4  
XP_807308   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   5.0  
XP_001349512  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   5.3  
XP_804748   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   5.7  

>EAY07722.1 on CAB92983  SBP1  (Others)  [Plasmodium falciparum]
          Length = 391

 Score = 38.1 bits (87), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 4/58 (6%)

Query: 262 VQCDSLETVDNGTQTQGRISLRTLVSKPGPTIDPVQPPSKPETPLYITPGPSVSNPVP 319
           V C +L++V NG    G +     V K  P IDP   P+K  T  Y++P  SV+NPVP
Sbjct: 257 VLCINLDSV-NG---NGFVWTLLGVHKKKPLIDPSNFPTKRVTQSYVSPDISVTNPVP 310



>EAY07722.1 on XP_001349207  EBA-175  (Adhesin)  [Plasmodium falciparum]
          Length = 1462

 Score = 28.9 bits (63), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 17/49 (34%), Positives = 24/49 (48%)

Query: 458  EFSALDLTSMLQSDSDDGELPSVSSTYSPSNVSSPSNASSSLGNDASSI 506
            E+  + L S +  +SDDGEL   +S  S  N  S    +   GND S +
Sbjct: 1107 EYEDIVLKSHMNRESDDGELYDENSDLSTVNDESEDAEAKMKGNDTSEM 1155



>EAY07722.1 on XP_807593   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 715

 Score = 28.1 bits (61), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 4/47 (8%)

Query: 466 SMLQSDSDDGELPSVSSTYSPSNVSSPSNASSSLGNDASSIDTSAIN 512
            +L S  DDGE    SS Y      + SN+SSS G DASS+     N
Sbjct: 656 GILDSSDDDGEDKD-SSEYDDG---AHSNSSSSFGGDASSVSAGGRN 698



>EAY07722.1 on XP_807308   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 717

 Score = 26.6 bits (57), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 1/41 (2%)

Query: 472 SDDGELPSVSSTYSPSNVSSPSNASSSLGNDASSIDTSAIN 512
           SDDGE    S      N  + SN+SSS G DASS+     N
Sbjct: 661 SDDGEDKDSSDD-GDDNDGAHSNSSSSFGGDASSVSAGGRN 700



>EAY07722.1 on XP_001349512  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2980

 Score = 26.6 bits (57), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 179 PQYEARCMELIQSI-INDAPLTASSVPSEEALGDLLL 214
           P+ E  C   ++++ +N   L+ SS+ S   LGD+LL
Sbjct: 845 PRREHMCTSNLENLNLNSKGLSNSSIASNSLLGDVLL 881



>EAY07722.1 on XP_804748   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 843

 Score = 26.2 bits (56), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 19/83 (22%), Positives = 41/83 (49%), Gaps = 5/83 (6%)

Query: 414 EFDQIQQPKQ----PQNQQPKPQPAKPQKKGIELPPLGPIFALPSDVEEFSALDLTSMLQ 469
           ++D++Q P Q      ++    +       G+ +     +F+L + + E + +D+ SM+ 
Sbjct: 257 KWDEVQSPVQQTTLAAHKGNLTEFIASGGSGVLMEDGTIVFSLMA-MNEKNEVDVYSMII 315

Query: 470 SDSDDGELPSVSSTYSPSNVSSP 492
              D+G   S+S++ SP+   SP
Sbjct: 316 YSKDNGSTWSLSNSVSPAKCGSP 338




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07725.1 hypothetical protein TVAG_118060 [Trichomonas
vaginalis G3]
         (249 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609533  variant erythrocyte surface antigen-1, alpha subun...    29   0.26 
XP_804105   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.5  
XP_816886   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.7  
XP_804011   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.7  
XP_802902   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   2.2  
XP_803953   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   2.3  
XP_001608668  variant erythrocyte surface antigen-1, alpha subun...    26   2.7  
XP_001351080  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   4.5  
XP_820143   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   7.5  

>EAY07725.1 on XP_001609533  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1162

 Score = 29.3 bits (64), Expect = 0.26,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 35/71 (49%)

Query: 88  KKHEKIHAQAEKIKNLEKELHELKSENSDLATKANSTGLQLQIKQLEFQEALKDKLIAQL 147
           K  E I+   E +K LEK + ELK +  D A +     +   + + E Q  L+ ++  + 
Sbjct: 733 KISESINKVREVLKELEKVIKELKKKEVDDANELLGVVMDPYVPEKELQNILQREVSHEY 792

Query: 148 TAQLTACQEAV 158
           T  L+A ++ +
Sbjct: 793 TILLSAIEKII 803



>EAY07725.1 on XP_804105   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1017

 Score = 26.6 bits (57), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 3/41 (7%)

Query: 88  KKHEKIHAQAEKIKNLEKELHELKSENS---DLATKANSTG 125
           K+ E+I +  +K K+L+  LH  +S +S   DL TK    G
Sbjct: 448 KQLERIKSMVKKWKDLDSALHSCRSGSSGTVDLPTKGMCNG 488



>EAY07725.1 on XP_816886   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 905

 Score = 26.6 bits (57), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 3/41 (7%)

Query: 88  KKHEKIHAQAEKIKNLEKELHELKSENS---DLATKANSTG 125
           K+ E+I +  +K K+L+  LH  +S +S   DL TK    G
Sbjct: 408 KQLERIKSTVKKWKDLDSALHSCRSGSSATFDLPTKGMCNG 448



>EAY07725.1 on XP_804011   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 952

 Score = 26.6 bits (57), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 3/41 (7%)

Query: 88  KKHEKIHAQAEKIKNLEKELHELKSENS---DLATKANSTG 125
           K+ E+I +  +K K+L+  LH  +S +S   DL TK    G
Sbjct: 446 KQLERIKSMVKKWKDLDSALHSCRSVSSGTVDLPTKGMCNG 486



>EAY07725.1 on XP_802902   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 719

 Score = 26.2 bits (56), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 25/95 (26%), Positives = 38/95 (40%), Gaps = 17/95 (17%)

Query: 86  IEKKHEKIHAQAEKIKNLEKELHELKSENS---DLATKANSTGLQLQIKQLEFQEALKDK 142
           + K+ E+I +  +K K+L+  LH  +S +S   DL TK    G               D 
Sbjct: 157 LGKQLERIKSMVKKWKDLDGALHSCRSVSSGTVDLPTKGMCNG-----------PVPTDG 205

Query: 143 LIAQLTAQLTACQEAVYNDRVKIYNAMNKEPESTV 177
           L+  L+   +   E  + D     NA  K  E  V
Sbjct: 206 LVGFLSGNFS---EDTWRDEYLCVNATVKNGERRV 237



>EAY07725.1 on XP_803953   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1027

 Score = 26.2 bits (56), Expect = 2.3,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 3/41 (7%)

Query: 88  KKHEKIHAQAEKIKNLEKELHELKSENS---DLATKANSTG 125
           K+ E+I +  +K K+L+  LH  +S +S   DL TK    G
Sbjct: 455 KQLERIKSMVKKWKDLDSALHSCRSVSSGTVDLPTKGMCNG 495



>EAY07725.1 on XP_001608668  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1337

 Score = 25.8 bits (55), Expect = 2.7,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 9/73 (12%)

Query: 62  KQKIHVYKQELKERNDAIETRDQLIEKKHEKIHAQAEKIKN---------LEKELHELKS 112
           KQK+   K+EL++  +A+E+   +  K+ E+     EK K          LEK++  L++
Sbjct: 721 KQKLGEAKKELEKAKEAVESEVGMDGKELEEAKKAVEKAKTEGDNVRMAKLEKKMKALEN 780

Query: 113 ENSDLATKANSTG 125
               L     S G
Sbjct: 781 AKDALNKLMTSGG 793



>EAY07725.1 on XP_001351080  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2209

 Score = 25.4 bits (54), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 30/96 (31%)

Query: 5   YEEEDFSGE---------VLDVDQYL---DQLPDHENAEVIKEIIRQNQQSMKR----RN 48
           YE+EDF            VLD+  +    +  P  +  + ++EII++NQ+++ R     N
Sbjct: 646 YEKEDFGKGLTPYKTLEWVLDLSYFPIIKEAHPKEKPVQKMEEIIKKNQENISRVTKQNN 705

Query: 49  EAIKFLKQHCLSRKQKIHVYKQELKERNDAIETRDQ 84
              KFL              +QEL+E N+ ++ R Q
Sbjct: 706 SITKFL--------------QQELQEANNCLQKRKQ 727



>EAY07725.1 on XP_820143   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 869

 Score = 24.6 bits (52), Expect = 7.5,   Method: Composition-based stats.
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%)

Query: 79  IETRDQLIEKKHEKIHAQAEKIK--NLEKELHEL-KSENSDLATK 120
           +ETR+     + E+IHAQ   +K   L   L  + +  NSD  TK
Sbjct: 804 VETREGGTNGREEEIHAQNGDVKAAALSNSLGNVSQGNNSDAGTK 848




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07727.1 hypothetical protein TVAG_118080 [Trichomonas
vaginalis G3]
         (593 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609667  variant erythrocyte surface antigen-1, alpha subun...    31   0.27 
XP_001609450  variant erythrocyte surface antigen-1, alpha subun...    30   0.36 
XP_001611897  variant erythrocyte surface antigen-1, alpha subun...    30   0.60 
XP_821693   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.6  
XP_001350415  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   3.7  
XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 27   5.1  
XP_966160  PfEMP1  (Establishment)  [Plasmodium falciparum]            26   6.7  

>EAY07727.1 on XP_001609667  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1303

 Score = 30.8 bits (68), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 12/83 (14%)

Query: 153 IALNNLMHQREERITKYTGDIDKIELEIADLHSAMQYSDNKIKKIQDQSQKIKEKVEELS 212
           +  + + H R  R+ K  G +D ++                  K++D  +KI E V +L 
Sbjct: 629 LGCDPMEHDRGSRVGKVKGVLDGVK------------GGGDAGKLKDVLEKIGEVVVQLG 676

Query: 213 NYKNQLEKQNESIIDEIKAKLKE 235
           N +  LE++    I  ++ KL+E
Sbjct: 677 NAQEALERRKGEEIKGVQKKLQE 699



>EAY07727.1 on XP_001609450  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1309

 Score = 30.4 bits (67), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 9/81 (11%)

Query: 153 IALNNLMHQREERITKYTGDIDKIELEIADLHSAMQYSDNKIKKIQDQSQKIKEKVEELS 212
           +  + + H R++R+ K  G++ K+           Q  D+    ++   +KI E V +L 
Sbjct: 607 LGCDPMEHDRKKRVGKVNGELGKV---------VAQGKDSVPGALKTLLEKIGEVVVQLG 657

Query: 213 NYKNQLEKQNESIIDEIKAKL 233
           N +  LE +    I  +KA L
Sbjct: 658 NAQEALEGKKPEAILGVKAAL 678



>EAY07727.1 on XP_001611897  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1369

 Score = 29.6 bits (65), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 92/201 (45%), Gaps = 25/201 (12%)

Query: 153 IALNNLMHQREERITKYTGDIDKIELEIADLHSAMQYSDNKIKKIQDQSQKIKEKVEELS 212
           +  N + H R+ R+ K    +  +E E+  L+     S      ++   +KI E V +L 
Sbjct: 647 LGCNPMEHDRKCRVEKLRKGLVGVENELKRLYYGT--SGTLSGSLKTLLEKIGEVVVQLG 704

Query: 213 NYKNQLEKQNES-IIDEIK---AKLKEDLDKSYKFNEQYILLHNEHVQITKKISELSTQY 268
           N +  LEK+ E+  I+ +K    K K++L+K+    E+ + ++     +T K++E     
Sbjct: 705 NAQEVLEKKAENKAIEGVKVALGKAKKELEKARTGLEKAVKVNG---GLTGKLTEAKN-- 759

Query: 269 MKLDVKQQNTENAVVIT---GSNPETLTLDPTTFPNVEKIMDQLKTKIDDFDQTMEARTK 325
            KLD   +N     + T   GS+  +L          ++I  + +    D+    +  ++
Sbjct: 760 -KLDALTKNGGGGALDTLANGSHAGSL----------QQITSEAQKWRKDYSSAKDRISE 808

Query: 326 TATEKLKILTEEKEKVAKEIK 346
              + L++LT  KE V ++IK
Sbjct: 809 VIHKVLEVLTTLKEGVKEKIK 829



>EAY07727.1 on XP_821693   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 834

 Score = 27.3 bits (59), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 30/75 (40%), Gaps = 7/75 (9%)

Query: 231 AKLKEDLDKSYKFNEQYILLHNEHVQITKKISELSTQYMKLDVKQQNTENAVVITGSNPE 290
           A ++ED D      EQ + L      +  K SE   + M L   +Q TE   + TG  P 
Sbjct: 737 ADVEEDADSPSVEGEQIVAL------LATKPSEAPEEKMALQRPRQETEAQQITTGGKPA 790

Query: 291 TLTLDPTTFPNVEKI 305
           T    PT  P    I
Sbjct: 791 TTQQVPTA-PGPHAI 804



>EAY07727.1 on XP_001350415  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3056

 Score = 26.9 bits (58), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 43/102 (42%), Gaps = 8/102 (7%)

Query: 83   LKNIHDEAESLIIS-----RNKLIQQLQNTKEKMILYDEKIHEYQAYIEKLESREVKLGQ 137
            L  + DEA     S     RN +  + +N KEK   Y   I +     +K +    K  +
Sbjct: 1055 LSRVSDEAAQPKFSDNERDRNSITHEDKNCKEKCKCYSLWIEKINDQWDKQKDNYNKFQR 1114

Query: 138  KQTIFTNKYSDLPNHIALNNLM--HQREERITKY-TGDIDKI 176
            KQ    NK S     ++L+N +     EE I KY  GD  KI
Sbjct: 1115 KQIYDANKGSQNKKVVSLSNFLFFSCWEEYIQKYFNGDWSKI 1156



>EAY07727.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 26.6 bits (57), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 32/47 (68%), Gaps = 5/47 (10%)

Query: 192  NKIKKIQDQSQ----KIKEKVEELSNYKNQL-EKQNESIIDEIKAKL 233
            N+IK+I++ +Q    K+ +KV+EL NY N + E++   +ID IK K+
Sbjct: 1806 NEIKEIKEVAQTEYDKLNKKVDELKNYLNNIKEQEGHRLIDYIKEKI 1852



>EAY07727.1 on XP_966160  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2394

 Score = 26.2 bits (56), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 5/46 (10%)

Query: 315 DFDQTMEARTKTATEKLKILTEEKE-----KVAKEIKYYTDYNENL 355
           +F +T+E   +T    LK+L EEKE     +V +  K + D+N+N+
Sbjct: 408 EFYETLEKEHRTVDTFLKLLNEEKECKNHPEVGEGKKTFIDFNDNI 453




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07734.1 hypothetical protein TVAG_118150 [Trichomonas
vaginalis G3]
         (256 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001611147  variant erythrocyte surface antigen-1, alpha subun...    28   0.55 
XP_001611365  variant erythrocyte surface antigen-1, alpha subun...    27   1.4  
XP_001611736  variant erythrocyte surface antigen-1, alpha subun...    25   4.2  

>EAY07734.1 on XP_001611147  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1304

 Score = 28.1 bits (61), Expect = 0.55,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 9/71 (12%)

Query: 176 TDGKLAIYDTKIVVTPTKDPRSPITL-ELNDIEHFQKVTMLCIFFVFYMKDGRCYEISFR 234
           TD KL  Y         ++  +PIT+ E N   HFQ VT  C   +  ++ G     S  
Sbjct: 493 TDKKLLFYQ--------ENRWAPITVHEYNLFAHFQAVTQYCPLVLIGIQGGIHSSKSTD 544

Query: 235 DTQESDIEFVY 245
           +T+E  I  +Y
Sbjct: 545 NTKEPAIHALY 555



>EAY07734.1 on XP_001611365  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1335

 Score = 26.9 bits (58), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)

Query: 197 SPITL-ELNDIEHFQKVTMLCIFFVFYMKDGRCYEISFRDTQESDIEFVY 245
           +PIT+ E N   HFQ VT  C   +  ++ G     S   T+E  I  +Y
Sbjct: 516 APITVHEYNLFAHFQAVTQYCPLVLIGIQGGIHSSKSTDSTKEPPIHSLY 565



>EAY07734.1 on XP_001611736  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1365

 Score = 25.4 bits (54), Expect = 4.2,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%)

Query: 197 SPITL-ELNDIEHFQKVTMLCIFFVFYMKDGRCYEISFRDTQESDIEFVY 245
           +PIT+ E N   HFQ VT  C   +  ++ G     + + T+E  I  +Y
Sbjct: 560 APITVHEFNLFAHFQAVTQYCPLVLIGIQGG--LHSATKGTKEPPIHSLY 607




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07738.1 SNF7 family protein [Trichomonas vaginalis
G3]
         (199 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001610721  variant erythrocyte surface antigen-1, alpha subun...    28   0.39 
XP_817165   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   2.0  
XP_820382   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   2.1  
XP_818220   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   3.4  
XP_819383   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   3.8  
XP_813236   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   3.9  
XP_843649  VSG  (Establishment)  [Trypanosoma brucei]                  25   4.4  
XP_810614   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   4.4  
XP_001609034  variant erythrocyte surface antigen-1, alpha subun...    24   6.7  
XP_001350798  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   7.7  
XP_802557   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   7.8  
XP_806338   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   8.3  
XP_807448   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   8.4  
XP_812043   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   9.0  
XP_818221   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   9.5  

>EAY07738.1 on XP_001610721  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1331

 Score = 28.1 bits (61), Expect = 0.39,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 28/42 (66%), Gaps = 2/42 (4%)

Query: 109  EMTNSVLKTMNEQLTPEMVEKLMDENQEETEKVNEITDLLSQ 150
            E ++   K  +E L  E +EK++++ QE+T + + +T+LLSQ
Sbjct: 1212 ERSDKTTKHCHEFL--ESLEKVLEDKQEDTSQDHPLTNLLSQ 1251



>EAY07738.1 on XP_817165   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 750

 Score = 25.8 bits (55), Expect = 2.0,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 24/44 (54%)

Query: 78  IVKTDGMLTQLQEQLNHLENAKMIKEFAKNLEMTNSVLKTMNEQ 121
           ++ +DG L  LQ + N  ++A  +    K +   NSVLKT  ++
Sbjct: 437 LMYSDGKLHLLQRRDNGEDSALSLSRLTKEVSTINSVLKTWAQK 480



>EAY07738.1 on XP_820382   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 729

 Score = 25.8 bits (55), Expect = 2.1,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 25/46 (54%)

Query: 76  AMIVKTDGMLTQLQEQLNHLENAKMIKEFAKNLEMTNSVLKTMNEQ 121
           + ++ +DG L  LQ + N   +A ++    + L   NSVLKT  ++
Sbjct: 435 STLLYSDGKLHLLQRRGNGEGSAILLSRLTEELSTINSVLKTWAQK 480



>EAY07738.1 on XP_818220   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 768

 Score = 25.0 bits (53), Expect = 3.4,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 9/82 (10%)

Query: 66  LALRTKKAREAMIVKTDGMLTQLQEQLNHLENAKMIKEFAKNLEMTNSVLKT-------M 118
           +A+     R   ++ +DG L  L+E LN   +A  +    + L+   S+L T        
Sbjct: 422 VAMDNNLERFHALLYSDGALHLLKEGLNEKGSAISLARLTEELKTIKSILSTWAQLDSSF 481

Query: 119 NEQLTPE--MVEKLMDENQEET 138
           +E  TP   +V  L DE  + T
Sbjct: 482 SESSTPTTGLVAVLSDEANDGT 503



>EAY07738.1 on XP_819383   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 753

 Score = 25.0 bits (53), Expect = 3.8,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 71  KKAREAMIVKTDGMLTQLQEQLNHLENAKMIKEFAKNLEMTNSVLKTMNEQ 121
           K+  E+ ++ +DG L  LQ + N   +   +    + L   NSVL T +++
Sbjct: 450 KEKLESALLYSDGSLHLLQRRGNGEGSVMSLSRLTEELSTINSVLSTWSQK 500



>EAY07738.1 on XP_813236   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 728

 Score = 25.0 bits (53), Expect = 3.9,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 26/51 (50%)

Query: 71  KKAREAMIVKTDGMLTQLQEQLNHLENAKMIKEFAKNLEMTNSVLKTMNEQ 121
           K+   + ++ +DG L  LQ + N   +A  +    + L   NSVLKT  ++
Sbjct: 427 KEELASTLLYSDGKLHLLQRRGNGEGSAISLSRLTEELSTINSVLKTWAQK 477



>EAY07738.1 on XP_843649  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 509

 Score = 24.6 bits (52), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 10/22 (45%), Positives = 14/22 (63%)

Query: 134 NQEETEKVNEITDLLSQNMTPE 155
           N +ETE  N+I D++ Q   PE
Sbjct: 334 NNQETEYNNKIADIIKQTYGPE 355



>EAY07738.1 on XP_810614   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 728

 Score = 24.6 bits (52), Expect = 4.4,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 21/40 (52%)

Query: 78  IVKTDGMLTQLQEQLNHLENAKMIKEFAKNLEMTNSVLKT 117
           ++ +DG L  L+E+ N   +A  +      L+  NSVL T
Sbjct: 428 LLYSDGALHLLKERANEKGSAISLARLTDELKTINSVLST 467



>EAY07738.1 on XP_001609034  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1313

 Score = 24.3 bits (51), Expect = 6.7,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 23/47 (48%)

Query: 135 QEETEKVNEITDLLSQNMTPELDAEAEEEYERMLQEMENGEEKQQNE 181
           +E  +KVNE    L + +T + D E  +   +    +E  +E  +N+
Sbjct: 718 REVLDKVNEKVKELEKVVTEKADGETSQALSKAKTALERAKEMVKND 764



>EAY07738.1 on XP_001350798  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2359

 Score = 24.3 bits (51), Expect = 7.7,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 20/46 (43%)

Query: 153  TPELDAEAEEEYERMLQEMENGEEKQQNEPEAEEQEEAKPEKVAVA 198
            TP+ + EAE+E E         EE+        E    KPE+ A A
Sbjct: 1837 TPQQEPEAEDEGECKAASPATSEEQTNQTSNPHETPVLKPEEEATA 1882



>EAY07738.1 on XP_802557   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 608

 Score = 23.9 bits (50), Expect = 7.8,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 22/43 (51%)

Query: 39  LRLEADNEKQIQVAKQLAKEGKLDRAKLALRTKKAREAMIVKT 81
           L +++ NEK I V +    +G      L+LR +  R   +VKT
Sbjct: 269 LLMKSGNEKLISVYENKKGDGSYSLVALSLREQLERIKSMVKT 311



>EAY07738.1 on XP_806338   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 652

 Score = 23.9 bits (50), Expect = 8.3,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 71  KKAREAMIVKTDGMLTQLQEQLNHLENAKMIKEFAKNLEMTNSVLKTMNEQ 121
           +K   + ++ +DG L  LQ + N   +A  +    + +   NSVLKT  ++
Sbjct: 447 EKEVASTLLYSDGKLHLLQRRENDKGSAISLSRLTEEVSTINSVLKTWAQK 497



>EAY07738.1 on XP_807448   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 831

 Score = 23.9 bits (50), Expect = 8.4,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 23/47 (48%)

Query: 135 QEETEKVNEITDLLSQNMTPELDAEAEEEYERMLQEMENGEEKQQNE 181
           +EE +KV ++T  L+    P +      +  R+L   E+  E  ++E
Sbjct: 714 EEEKQKVRQLTTSLADVEDPRIAQPTNSQSVRVLAGSESSAENAEDE 760



>EAY07738.1 on XP_812043   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 807

 Score = 23.9 bits (50), Expect = 9.0,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 71  KKAREAMIVKTDGMLTQLQEQLNHLENAKMIKEFAKNLEMTNSVLKTMNEQ 121
           K+   + ++ +DG L  LQ + N   +A  +    + +   NSVLKT  ++
Sbjct: 446 KEELASALLYSDGNLHLLQRRENDKGSAISLSRLTEEVSTINSVLKTWAQK 496



>EAY07738.1 on XP_818221   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 748

 Score = 23.9 bits (50), Expect = 9.5,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 25/46 (54%)

Query: 76  AMIVKTDGMLTQLQEQLNHLENAKMIKEFAKNLEMTNSVLKTMNEQ 121
           + ++ +DG L  LQ++ N  ++A  +      +   NSVLK+  ++
Sbjct: 434 SALMYSDGRLHLLQQRDNGEDSALSLSRLTDEVSTINSVLKSWAQK 479




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07739.1 hypothetical protein TVAG_118200 [Trichomonas
vaginalis G3]
         (88 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001612314  variant erythrocyte surface antigen-1, alpha subun...    23   3.6  

>EAY07739.1 on XP_001612314  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1308

 Score = 23.1 bits (48), Expect = 3.6,   Method: Composition-based stats.
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 37  KKKPQCGGVENDKERKEIIEKLETYRS 63
           K+  +C  +EN K    I E  ++YRS
Sbjct: 236 KENAKCSCIENGKNSLRIREHKDSYRS 262




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07741.1 hypothetical protein TVAG_118220 [Trichomonas
vaginalis G3]
         (173 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 25   2.3  
XP_820757   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   5.1  
XP_966305  PfEMP1  (Establishment)  [Plasmodium falciparum]            23   9.0  

>EAY07741.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 25.4 bits (54), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 12/28 (42%), Positives = 18/28 (64%)

Query: 11 TEFNFSDIKTIEAFEYPNQASKKIWSIN 38
          T+FNFS+ K +++FE  N  +    SIN
Sbjct: 40 TDFNFSEEKNLKSFEGKNNNNDNYASIN 67



>EAY07741.1 on XP_820757   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 912

 Score = 24.3 bits (51), Expect = 5.1,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 11/66 (16%)

Query: 8   NNETEFNFSDIKTIEAF-------EYPNQASKKIWSINSNNIL----HISSQIIELITNN 56
           N E E   ++ K I  F          N  S++   +   N+L     +SS++I ++  N
Sbjct: 679 NEECELGDTESKGISHFYIGGDGGSAENTESREGAPVTVKNVLLYNRPLSSEVIGVLNPN 738

Query: 57  KISIQL 62
           K++IQL
Sbjct: 739 KVTIQL 744



>EAY07741.1 on XP_966305  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3954

 Score = 23.5 bits (49), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 12/36 (33%), Positives = 17/36 (47%)

Query: 25   EYPNQASKKIWSINSNNILHISSQIIELITNNKISI 60
            E   +  KK W  N N+I       +E I NNK ++
Sbjct: 1474 EGDKEKRKKFWETNKNDIWQGMLCALEKIANNKKTL 1509




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07743.1 hypothetical protein TVAG_118240 [Trichomonas
vaginalis G3]
         (237 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609101  variant erythrocyte surface antigen-1, alpha subun...    32   0.032
XP_001609163  variant erythrocyte surface antigen-1, alpha subun...    32   0.032
XP_001608668  variant erythrocyte surface antigen-1, alpha subun...    30   0.10 
CAB51787  gp63  (Invasion)  [Leishmania donovani]                      28   0.42 
CAB51784  gp63  (Invasion)  [Leishmania donovani]                      28   0.54 
CAB51783  gp63  (Invasion)  [Leishmania donovani]                      28   0.55 
CAB51786  gp63  (Invasion)  [Leishmania donovani]                      28   0.58 
CAB51785  gp63  (Invasion)  [Leishmania donovani]                      27   0.60 
XP_001348176  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   0.96 
XP_001609666  variant erythrocyte surface antigen-1, alpha subun...    27   1.3  
XP_001610714  variant erythrocyte surface antigen-1, alpha subun...    27   1.4  
XP_001348153  MAEBL  (Adhesin)  [Plasmodium falciparum]                25   4.1  
XP_828097  VSG  (Establishment)  [Trypanosoma brucei]                  24   9.5  

>EAY07743.1 on XP_001609101  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1359

 Score = 32.0 bits (71), Expect = 0.032,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 7/115 (6%)

Query: 91  ELKKILETQNAKLAEKENKEKIQQKMQDRLDSDQKKLDTAKSA--GKTEAAAKLENTVST 148
           E+KK LE    KL E +  ++  +  +  L+  +  L TAK A  G +      +N VS 
Sbjct: 742 EIKKTLEAAKEKLEEAKKTQEALEAAKGELEGAKGALTTAKKAFPGSSSDIDPCKNIVSA 801

Query: 149 DEANLNDA-----KANAQKAEQDYNNYMEESKTKFPALFVDKTISLVRKLQASSQ 198
               L+ A      A  Q  E    +  E     F A +    ++ V K QA  +
Sbjct: 802 TIDGLHKALQLLKDAVQQIMEATRKDTTEFQDAIFSATYTADVVTEVEKHQAKQK 856



>EAY07743.1 on XP_001609163  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1360

 Score = 32.0 bits (71), Expect = 0.032,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 7/115 (6%)

Query: 91  ELKKILETQNAKLAEKENKEKIQQKMQDRLDSDQKKLDTAKSA--GKTEAAAKLENTVST 148
           E+KK LE    KL E +  ++  +  +  L+  +  L TAK A  G +      +N VS 
Sbjct: 742 EIKKTLEAAKEKLEEAKKTQEALEAAKGELEGAKGALTTAKKAFPGSSSDIDPCKNIVSA 801

Query: 149 DEANLNDA-----KANAQKAEQDYNNYMEESKTKFPALFVDKTISLVRKLQASSQ 198
               L+ A      A  Q  E    +  E     F A +    ++ V K QA  +
Sbjct: 802 TIDGLHKALQLLKDAVQQIMEATRKDTTEFQDAIFSATYTADVVTEVEKHQAKQK 856



>EAY07743.1 on XP_001608668  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1337

 Score = 30.4 bits (67), Expect = 0.10,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 55/113 (48%), Gaps = 12/113 (10%)

Query: 95  ILETQNAKLA-EKENKEKIQQKMQDRLDSDQKKLDTAKSAGKTEAAAKLENTVSTDEANL 153
           +++  NA+ A E + + K+ + ++ +L   +K+L+ AK A        +E+ V  D   L
Sbjct: 698 VVQLGNAQEALEGKAESKVIEGVKQKLGEAKKELEKAKEA--------VESEVGMDGKEL 749

Query: 154 NDAKANAQKAEQDYNNY-MEESKTKFPALFVDKTISLVRKLQASSQKNNQIGS 205
            +AK   +KA+ + +N  M + + K  AL  +     + KL  S   N  + +
Sbjct: 750 EEAKKAVEKAKTEGDNVRMAKLEKKMKAL--ENAKDALNKLMTSGGSNGALNT 800



>EAY07743.1 on CAB51787  gp63  (Invasion)  [Leishmania donovani]
          Length = 255

 Score = 28.1 bits (61), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 9/21 (42%), Positives = 16/21 (76%)

Query: 171 MEESKTKFPALFVDKTISLVR 191
           ME+  TK+PA+F + ++ +VR
Sbjct: 123 MEDGITKWPAMFCNVSVDVVR 143



>EAY07743.1 on CAB51784  gp63  (Invasion)  [Leishmania donovani]
          Length = 255

 Score = 27.7 bits (60), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 9/21 (42%), Positives = 17/21 (80%)

Query: 171 MEESKTKFPALFVDKTISLVR 191
           ME++ TK+PA+F + ++ +VR
Sbjct: 120 MEQNITKWPAMFCNVSVDVVR 140



>EAY07743.1 on CAB51783  gp63  (Invasion)  [Leishmania donovani]
          Length = 255

 Score = 27.7 bits (60), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 9/21 (42%), Positives = 17/21 (80%)

Query: 171 MEESKTKFPALFVDKTISLVR 191
           ME++ TK+PA+F + ++ +VR
Sbjct: 117 MEQNITKWPAMFCNVSVDVVR 137



>EAY07743.1 on CAB51786  gp63  (Invasion)  [Leishmania donovani]
          Length = 255

 Score = 27.7 bits (60), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 9/21 (42%), Positives = 17/21 (80%)

Query: 171 MEESKTKFPALFVDKTISLVR 191
           ME++ TK+PA+F + ++ +VR
Sbjct: 118 MEQNITKWPAMFCNVSVDVVR 138



>EAY07743.1 on CAB51785  gp63  (Invasion)  [Leishmania donovani]
          Length = 255

 Score = 27.3 bits (59), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 9/21 (42%), Positives = 17/21 (80%)

Query: 171 MEESKTKFPALFVDKTISLVR 191
           ME++ TK+PA+F + ++ +VR
Sbjct: 130 MEQNITKWPAMFCNVSVDVVR 150



>EAY07743.1 on XP_001348176  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3119

 Score = 27.3 bits (59), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 14/41 (34%), Positives = 19/41 (46%)

Query: 1    MFSSLVKKITESPYQDYSNFQRTFDSNNNFNNLLRTNYAAA 41
            +F+  V K+ ESPY   SN +   D N N      + Y  A
Sbjct: 2255 LFNDFVSKLNESPYCINSNVEDKIDFNKNGETFGSSQYCKA 2295



>EAY07743.1 on XP_001609666  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1269

 Score = 26.9 bits (58), Expect = 1.3,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 51/112 (45%), Gaps = 9/112 (8%)

Query: 50  QDKQVEDIKQVYIKLKPIGGELLELHVGQMDFLQEYSLFCHELKKILETQNAKLAEK--- 106
           +  +V+++K++  K+      L E     ++ + E  +     ++ LET++  + EK   
Sbjct: 585 RKSRVKELKKILWKVPSGKDTLAEKLKDVLEKIGEVVVQLGNAQEALETKDKDVIEKVKE 644

Query: 107 ------ENKEKIQQKMQDRLDSDQKKLDTAKSAGKTEAAAKLENTVSTDEAN 152
                 E  E  +  ++D+L+  +KKLD   + G +    ++      D+AN
Sbjct: 645 ALRKAKEGLETAKNGLKDKLEEAKKKLDELTNGGGSGILGEVVGGSGLDKAN 696



>EAY07743.1 on XP_001610714  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1231

 Score = 26.9 bits (58), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 8/73 (10%)

Query: 95  ILETQNAKLAEKENKEKIQQKMQDRLDSDQKKLDTAKSAGKTEAAAKLENTVSTDEA--- 151
           +++  NA+ A +  ++K  Q ++  L+  +  LDTAK  GK E A K    ++T+     
Sbjct: 611 VVQLGNAQEALEGKEKKAIQGVKRELEKAKGALDTAK--GKLEKAKKALEKLTTNGGGGG 668

Query: 152 ---NLNDAKANAQ 161
              N+ DA   AQ
Sbjct: 669 ILKNVVDAIGKAQ 681



>EAY07743.1 on XP_001348153  MAEBL  (Adhesin)  [Plasmodium falciparum]
          Length = 2054

 Score = 25.4 bits (54), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 13/30 (43%), Positives = 18/30 (60%)

Query: 18  SNFQRTFDSNNNFNNLLRTNYAAAFGENYN 47
           +N Q+  DSNNN N +  T  + + GEN N
Sbjct: 558 NNNQKIKDSNNNMNGMSVTQRSPSIGENQN 587



>EAY07743.1 on XP_828097  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 520

 Score = 23.9 bits (50), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 15/54 (27%), Positives = 23/54 (42%)

Query: 173 ESKTKFPALFVDKTISLVRKLQASSQKNNQIGSKILEVAQQFHDFDDPSSKALR 226
           E+ T FP    DK  + + K   +S       +K   + Q  HD   P S A++
Sbjct: 93  EAGTNFPETLKDKPYADIWKANWASWWKAAKHAKNTNIGQPTHDLYKPISSAIQ 146




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07748.1 HD domain containing protein [Trichomonas
vaginalis G3]
         (422 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAB68611  AP51-3  (Adhesin)  [Trichomonas vaginalis]                   25   5.8  
AAB68609  AP51-1  (Adhesin)  [Trichomonas vaginalis]                   25   6.0  

>EAY07748.1 on AAB68611  AP51-3  (Adhesin)  [Trichomonas vaginalis]
          Length = 255

 Score = 25.4 bits (54), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 12/75 (16%)

Query: 292 ISDRI-IRRDLYKFI-------GEVRIAPKNSGGE--KYSQRHPKSIEEDIVEKVDGLTT 341
           +SD + ++R+LY  I         V IA    G E  + + +HP+ I + +++ V G+T 
Sbjct: 113 LSDPVEVKRELYFAILLDRQTQSPVVIASTEGGVEIEEVAAKHPEKIHKFVLDGVQGITE 172

Query: 342 DDIRVVSSRFRYGLT 356
           +  + +S +   GLT
Sbjct: 173 EVAQTISKKL--GLT 185



>EAY07748.1 on AAB68609  AP51-1  (Adhesin)  [Trichomonas vaginalis]
          Length = 255

 Score = 25.4 bits (54), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 12/79 (15%)

Query: 288 KAKNISDRI-IRRDLYKFI-------GEVRIAPKNSGGE--KYSQRHPKSIEEDIVEKVD 337
           +A  +SD + ++R+LY  I         V IA    G E  + +  HP+ I + +++ V+
Sbjct: 107 QAVMLSDPVEVKRELYFAILLDRQTQSPVVIASTEGGVEIEEVAAHHPEKIHKFVLDGVE 166

Query: 338 GLTTDDIRVVSSRFRYGLT 356
           G+T +  + +S++   GLT
Sbjct: 167 GITEEVAKNISTKL--GLT 183




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07749.1 hypothetical protein TVAG_118300 [Trichomonas
vaginalis G3]
         (113 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07753.1 hypothetical protein TVAG_000370 [Trichomonas
vaginalis G3]
         (140 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_821390   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   1.4  
XP_829789  VSG  (Establishment)  [Trypanosoma brucei]                  25   1.8  
XP_815807   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   3.5  
XP_817877   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   6.5  

>EAY07753.1 on XP_821390   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 940

 Score = 25.4 bits (54), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 18/25 (72%)

Query: 2   TDFTGNTSEEVLNAIKEAKKSKDKP 26
           +D +G+T++E L A+ E KK  +KP
Sbjct: 422 SDGSGDTNKEELIALYEKKKDGEKP 446



>EAY07753.1 on XP_829789  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 526

 Score = 25.0 bits (53), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 8/50 (16%)

Query: 80  IPTPAIVILWKGEPLLIRRPGWDDANKILGCMKEDEWLSILRFVAGLPRE 129
           I  P  ++LW    L+ +  G D    I+G     E  ++ +FVA  PRE
Sbjct: 4   IMLPMTIVLW----LVTKTEGTD----IVGGANRQEHAALCKFVAMAPRE 45



>EAY07753.1 on XP_815807   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 899

 Score = 24.3 bits (51), Expect = 3.5,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 19/29 (65%)

Query: 97  RRPGWDDANKILGCMKEDEWLSILRFVAG 125
           R+  W++  +++  + EDE  S+++ VAG
Sbjct: 212 RKIQWNENQRLVRTLCEDEHDSLMQLVAG 240



>EAY07753.1 on XP_817877   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 900

 Score = 23.5 bits (49), Expect = 6.5,   Method: Composition-based stats.
 Identities = 10/17 (58%), Positives = 12/17 (70%)

Query: 1   MTDFTGNTSEEVLNAIK 17
           +T  T NT EEVLN +K
Sbjct: 129 ITTQTANTPEEVLNEVK 145




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07763.1 hypothetical protein TVAG_000470 [Trichomonas
vaginalis G3]
         (94 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_827709  VSG  (Establishment)  [Trypanosoma brucei]                  25   0.65 
XP_827706  VSG  (Establishment)  [Trypanosoma brucei]                  24   1.7  
XP_001609033  variant erythrocyte surface antigen-1, alpha subun...    22   7.7  

>EAY07763.1 on XP_827709  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 474

 Score = 25.4 bits (54), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 23  IDSLAEELVVAETKALN--ERIGENKIDLHNYLKHDGGRGRKTG 64
           +D+  E L+   TK  +  ERI E   ++ + +K D GRGR+ G
Sbjct: 335 VDNKMEVLLQDRTKKTSKLERIKELSQEIESLIKGDTGRGRQQG 378



>EAY07763.1 on XP_827706  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 475

 Score = 24.3 bits (51), Expect = 1.7,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 40  ERIGENKIDLHNYLKHDGGRGRKTG 64
           ERI E   ++ + +K D GRGR+ G
Sbjct: 355 ERIKELSQEIESLIKGDTGRGRQQG 379



>EAY07763.1 on XP_001609033  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1270

 Score = 22.3 bits (46), Expect = 7.7,   Method: Composition-based stats.
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 5/37 (13%)

Query: 20  EKVIDSL-----AEELVVAETKALNERIGENKIDLHN 51
           EKV D L       + V A+ KAL E IGE  + L N
Sbjct: 610 EKVKDGLDGVKEGADSVAAKVKALLEAIGEVVVQLGN 646




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07764.1 hypothetical protein TVAG_000480 [Trichomonas
vaginalis G3]
         (859 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_804817   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           32   0.21 
XP_805195   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           32   0.25 
XP_805196   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           31   0.26 
XP_001349033  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   5.4  

>EAY07764.1 on XP_804817   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 769

 Score = 31.6 bits (70), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 7/68 (10%)

Query: 268 SYHEFNKKIDLPANLNEEIHEIRI--YCKDGNLKKSNEEIINFMYLF---NNPSIIVNKE 322
           S   +++ + + A +   I E R+  Y + GN  K   E+ N +YL+   NN S  V   
Sbjct: 384 SGGSWDESLRVGALITATIEERRVMLYTQRGNFWKGQTEMFNALYLWVTDNNRSFHVG-- 441

Query: 323 PLSIYHNK 330
           P+++Y+NK
Sbjct: 442 PVAMYNNK 449



>EAY07764.1 on XP_805195   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 769

 Score = 31.6 bits (70), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 5/49 (10%)

Query: 285 EIHEIRIYCKDGNLKKSNEEIINFMYLF---NNPSIIVNKEPLSIYHNK 330
           E  ++ +Y + GN  K   E+ N +YL+   NN S  V   P+++Y+NK
Sbjct: 403 EGRKVMLYTQRGNFWKGQREMFNALYLWVTDNNRSFHVG--PVAMYNNK 449



>EAY07764.1 on XP_805196   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 731

 Score = 31.2 bits (69), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 5/49 (10%)

Query: 285 EIHEIRIYCKDGNLKKSNEEIINFMYLF---NNPSIIVNKEPLSIYHNK 330
           E  ++ +Y + GN  K   E+ N +YL+   NN S  V   P+++Y+NK
Sbjct: 365 EGRKVMLYTQRGNFWKGQREMFNALYLWVTDNNRSFHVG--PVAMYNNK 411



>EAY07764.1 on XP_001349033  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2064

 Score = 26.9 bits (58), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 13/37 (35%), Positives = 24/37 (64%)

Query: 136 GIVSVYCRFDNETENKMMSKQIINAQNEKYALNFTVK 172
           G V    R  N T+N + +++I NA+NE++A++  +K
Sbjct: 666 GSVDAIERIKNITKNHVSTEEITNAENEEFAIDILLK 702




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07765.1 hypothetical protein TVAG_000490 [Trichomonas
vaginalis G3]
         (269 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07766.1 hypothetical protein TVAG_000500 [Trichomonas
vaginalis G3]
         (1120 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_827768  VSG  (Establishment)  [Trypanosoma brucei]                  30   0.54 
XP_809825   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   2.5  
AAX07985  alpha-7.3 giardin  (Others)  [Giardia duodenalis]            28   2.6  

>EAY07766.1 on XP_827768  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 489

 Score = 30.4 bits (67), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 9/80 (11%)

Query: 784 VLNSQKIQSYLDLNPFIQT--------HKKSIDFLKYIQNLQNSKSDKIIVDSIQKQEIS 835
           + N++K+Q  L LN  I+T         +++   L +IQ L N +  +    S     + 
Sbjct: 365 ITNAEKLQMTLRLNDKIETKDLSAVSPGEQTAAALSHIQGLHNKRELEAGKKSTSAAAVD 424

Query: 836 KPTKSEVTKTDKNEVNSNQK 855
            P KSE  K +K+E   N+K
Sbjct: 425 -PQKSEDCKGEKDETKCNKK 443



>EAY07766.1 on XP_809825   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 730

 Score = 28.5 bits (62), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 8/61 (13%)

Query: 522 KPISFSIENPLTLILSKPIFLTEIVFGLSENQNFPISPATVHISAGLYNNRQFDVTEIVS 581
           KP+    E  L L   +P+ L    FG    QNFP++ A V     LY NR  + TE+ +
Sbjct: 638 KPLG---EEELPLKSERPLELVSFCFGACGIQNFPVTVANVF----LY-NRPLNSTEMTA 689

Query: 582 L 582
           +
Sbjct: 690 I 690



>EAY07766.1 on AAX07985  alpha-7.3 giardin  (Others)  [Giardia duodenalis]
          Length = 255

 Score = 28.1 bits (61), Expect = 2.6,   Method: Composition-based stats.
 Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 4/76 (5%)

Query: 308 YAKLMNKIQSFCNYEENNLKVSMIKTKFAFSSDKLDNIPSVIDLFYSVSSSKFENFGMSR 367
           +A+++N   +FC    NN++      K A    K  +  +VI L  +   S+++   +S 
Sbjct: 134 WARMVNSWLAFCRSARNNVQGDAEALKTALIGVKHPDTDTVIRLLGTTVPSEWKQ--ISE 191

Query: 368 IFEN--KTTTEIASIQ 381
            FEN  K T E A I+
Sbjct: 192 AFENIAKKTIEQALIE 207




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07768.1 hypothetical protein TVAG_000520 [Trichomonas
vaginalis G3]
         (250 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351515  PfEMP1  (Establishment)  [Plasmodium falciparum]         29   0.26 
XP_001350796  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   2.3  

>EAY07768.1 on XP_001351515  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2181

 Score = 29.3 bits (64), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 13/32 (40%), Positives = 17/32 (53%)

Query: 176 CYHGAVDCFKFLRTKFDSEITQKCLKFSFLGG 207
           C    +DC K +R K+   I  +C K SFL G
Sbjct: 341 CSGNGLDCTKTIRAKYIYAIGSECTKCSFLCG 372



>EAY07768.1 on XP_001350796  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2646

 Score = 26.2 bits (56), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 176 CYHGAVDCFKFLRTKFDSEITQKCLKFSFLGG 207
           C     DC K +R K+   I  +C K SF  G
Sbjct: 342 CSGDGFDCTKTIRAKYIYAIGDECTKCSFWCG 373




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07769.1 hypothetical protein TVAG_000530 [Trichomonas
vaginalis G3]
         (708 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07774.1 hypothetical protein TVAG_000580 [Trichomonas
vaginalis G3]
         (377 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_827742  VSG  (Establishment)  [Trypanosoma brucei]                  31   0.090
XP_821902   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.8  
XP_821910   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   3.1  
XP_816233   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   3.2  
BAC44837    JESEBL/EBA-181  (Adhesin)  [Plasmodium falciparum]         25   7.0  

>EAY07774.1 on XP_827742  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 505

 Score = 31.2 bits (69), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 2/69 (2%)

Query: 227 PIRNGLEIRGNNLRFLTTENLIAKASAAADAL--PSLRPAIETPRATVTNISPKDTSQVA 284
           P+   LE  G+N + LT +  IA+A  AA A+   S RP  +   AT+T  S       A
Sbjct: 283 PLNRNLEASGDNKKLLTADKDIAEALVAAQAVVFESERPLKDEKLATLTGTSAAQAMYAA 342

Query: 285 LFITEGKYS 293
           L   +GK S
Sbjct: 343 LAAKQGKTS 351



>EAY07774.1 on XP_821902   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 854

 Score = 27.3 bits (59), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 9/26 (34%), Positives = 16/26 (61%)

Query: 213 MPLISSKITSLKNNPIRNGLEIRGNN 238
           +PL+ +K+  ++NNP+  GL   G  
Sbjct: 610 IPLLGAKVAGVENNPVLLGLSYNGGG 635



>EAY07774.1 on XP_821910   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 853

 Score = 26.6 bits (57), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 9/26 (34%), Positives = 16/26 (61%)

Query: 213 MPLISSKITSLKNNPIRNGLEIRGNN 238
           +PL+ +K+  ++NNP+  GL   G  
Sbjct: 610 IPLLGAKMAGVENNPVLLGLSYNGGG 635



>EAY07774.1 on XP_816233   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 851

 Score = 26.6 bits (57), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 9/26 (34%), Positives = 16/26 (61%)

Query: 213 MPLISSKITSLKNNPIRNGLEIRGNN 238
           +PL+ +K+  ++NNP+  GL   G  
Sbjct: 608 IPLLGAKMAGVENNPVLLGLSYNGGG 633



>EAY07774.1 on BAC44837    JESEBL/EBA-181  (Adhesin)  [Plasmodium falciparum]
          Length = 1566

 Score = 25.4 bits (54), Expect = 7.0,   Method: Composition-based stats.
 Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 6/94 (6%)

Query: 16   TIPNKYPVNKPITIEPSAEINQEFLEDLE-KQSTKYFSHHLNANKYRT--RIPEERTTSF 72
            T  +K  + KP  +EPS EI++  L     K+ ++         K  T  R  ++   + 
Sbjct: 1097 TETSKSNLEKPKDVEPSHEISEPVLSGTTGKEESELLKSKSIETKGETDPRSNDQEDATD 1156

Query: 73   DSVVNTRYKD---VRTAVNQSLFFTRAQPIAQQS 103
            D V N+R  +     +  NQS    R  PIA ++
Sbjct: 1157 DVVENSRDDNNSLSNSVDNQSNVLNREDPIASET 1190




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07777.1 F5/8 type C domain containing protein
[Trichomonas vaginalis G3]
         (428 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_814820   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.27 
XP_820184   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.28 
XP_001609533  variant erythrocyte surface antigen-1, alpha subun...    28   1.5  
XP_001350935  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   2.9  
XP_001349533  PfEMP3  (Establishment)  [Plasmodium falciparum]         27   3.7  
XP_001608795  variant erythrocyte surface antigen-1, alpha subun...    25   7.9  
XP_813677   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   8.4  
XP_821714   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   8.5  
XP_829761  VSG  (Establishment)  [Trypanosoma brucei]                  25   9.5  

>EAY07777.1 on XP_814820   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 611

 Score = 30.0 bits (66), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 11/59 (18%)

Query: 304 DPSD--FFLSENKPG---------QWIKFDFGENVVCLSHYSLKTHKYSGNSTHLKNWV 351
           DPSD  + LS   PG         +W K+++GE +  ++H +   +    ++ H  NW+
Sbjct: 278 DPSDKKWELSSETPGNGCRDPTLVKWEKYEYGERLFMMAHCAGGYYDVYMSTPHGVNWI 336



>EAY07777.1 on XP_820184   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1050

 Score = 30.0 bits (66), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 11/62 (17%)

Query: 304 DPSD--FFLSENKPGQ---------WIKFDFGENVVCLSHYSLKTHKYSGNSTHLKNWVI 352
           DPSD  + LS   PG+         W ++++GE +  ++H +   +    ++ H  NW  
Sbjct: 280 DPSDKKWELSSETPGKGCRDPTLVRWEEYEYGERLFMMAHCAGGYYDVYKSTPHGVNWYT 339

Query: 353 EG 354
            G
Sbjct: 340 SG 341



>EAY07777.1 on XP_001609533  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1162

 Score = 27.7 bits (60), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 31/148 (20%), Positives = 61/148 (41%), Gaps = 21/148 (14%)

Query: 101 IHLIKESNDLKKQMSILSSRLEDIEQYNFADEF--SRINQAFQVIENRIEKNIPRASQKT 158
           + L    +D KK   +L +  + + Q   A E    +  +A   ++  +EK      +  
Sbjct: 624 LPLGSNGSDAKKIKDVLEAIGQVVVQLGNAQEALEGKDKEAINAVKTALEKAKGELEEAV 683

Query: 159 AKINANLDKHVDQKLAMLADGVAKKITDLESKIKKQDRAQTSHFKEALDKLKSVESG-ID 217
            K+N  LD                K+ + ++ ++      +    E  +KL++  +G  D
Sbjct: 684 KKVNGGLDV---------------KLGEAKTALEALTNGGSGILGEVGEKLETATNGEYD 728

Query: 218 PLKNESREMRRSIRSVLQKQIEIEEALK 245
           P KN+  E    +R VL+   E+E+ +K
Sbjct: 729 PGKNKISESINKVREVLK---ELEKVIK 753



>EAY07777.1 on XP_001350935  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2268

 Score = 26.9 bits (58), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 7/104 (6%)

Query: 124  IEQYNF-ADEFSRINQAFQVIENRIE-----KNIPRASQKTAKINANLDKHVDQKLAMLA 177
            IEQY   +DE+  +    +  E+R E     K  P  +        N  +   +K     
Sbjct: 1592 IEQYKMDSDEYYYVRSCLEDFESRPELNKAIKPCPNLNNFKTSCGLNDTESSKKKDGDKR 1651

Query: 178  DGVAKKITDLESKIKK-QDRAQTSHFKEALDKLKSVESGIDPLK 220
            D V   +  LE K +K +D  +TS  ++  D L  VE   DPL+
Sbjct: 1652 DLVVCLLNKLEKKAEKYKDNHETSGEEKECDSLPHVEDDDDPLE 1695



>EAY07777.1 on XP_001349533  PfEMP3  (Establishment)  [Plasmodium falciparum]
          Length = 2441

 Score = 26.6 bits (57), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 73/152 (48%), Gaps = 23/152 (15%)

Query: 41  KDHHNLQRFLLKLLSKHGKKASSL-------FSTLDLSR---LTPR--EALEVLENNDLD 88
           K H NL+ +    L+K GK+ ++        ++  DL++   +T +  E LE     DL 
Sbjct: 806 KAHENLEEYNETDLAK-GKEVTNKAHENLEEYNETDLAKGKEVTNKAHENLEEYNETDLA 864

Query: 89  KHCIGESACNVCIHLIKESN--DLKKQMSILSSRLEDIEQYNFADEFSR----INQAFQV 142
           K   G+   N     ++E N  DL K   + +   E++E+YN  D  ++     N+A + 
Sbjct: 865 K---GKEVTNKARENLEEYNETDLAKGKEVTNKARENLEEYNETD-LAKGKEVTNKAHEN 920

Query: 143 IENRIEKNIPRASQKTAKINANLDKHVDQKLA 174
           +E   E ++ +  + T K + NL+++ +  LA
Sbjct: 921 LEEYNETDLAKGKEVTNKAHENLEEYNETDLA 952




 Score = 25.8 bits (55), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 10/118 (8%)

Query: 77   EALEVLENNDLDKHCIGESACNVCIHLIKESN--DLKKQMSILSSRLEDIEQYNFADEFS 134
            E LE     DL K   G+   N     ++E N  DL K   + +   E++E+YN  D  +
Sbjct: 941  ENLEEYNETDLAK---GKEVTNKAHENLEEYNETDLAKGKEVTNKARENLEEYNETD-LA 996

Query: 135  R----INQAFQVIENRIEKNIPRASQKTAKINANLDKHVDQKLAMLADGVAKKITDLE 188
            +     N+A + +E   E ++ +  + T K   NL+++ +  LA   +   K   +LE
Sbjct: 997  KGKEVTNKARENLEEYNETDLAKGKEVTNKARENLEEYNETDLAKGKEVTNKARENLE 1054



>EAY07777.1 on XP_001608795  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1323

 Score = 25.4 bits (54), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 24/114 (21%), Positives = 52/114 (45%), Gaps = 8/114 (7%)

Query: 135 RINQAFQVIENRIEKNIPRASQKTAKINANLDKHVDQKLAMLADGVAKKITDLESKIKKQ 194
           ++  A + +E + ++ I     K  +    L+  V+    M  DG   K+ + ++K+ + 
Sbjct: 671 QLGNAQEALEGKKKEAIEGVKGKLTEAREGLETAVNGNGGM--DG---KLGEAKNKLGEL 725

Query: 195 DRAQTSHFKEALDKLKSVE---SGIDPLKNESREMRRSIRSVLQKQIEIEEALK 245
               +   K+  D L + +   + +DP KN+     + +R+VL +  +  E LK
Sbjct: 726 TNGGSGILKDVEDALGTAQNDVTNVDPGKNKISAAIKGVRNVLDELRKGVEGLK 779



>EAY07777.1 on XP_813677   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 945

 Score = 25.4 bits (54), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 13/40 (32%), Positives = 23/40 (57%)

Query: 179 GVAKKITDLESKIKKQDRAQTSHFKEALDKLKSVESGIDP 218
           G+A ++ +L  K KK++  ++    + LDK  S+E G  P
Sbjct: 126 GIASELLELSDKTKKKELDESKLKTQVLDKCASLEEGQCP 165



>EAY07777.1 on XP_821714   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 827

 Score = 25.4 bits (54), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 3/69 (4%)

Query: 188 ESKIKKQDRAQTSHFKEALDKLKSVESGIDPLKNESREMRRSIRSVLQKQIEIEEALKGD 247
           E++ KK+D ++TS F     +L ++E G +P +  S +++++   +L+K     +  K D
Sbjct: 104 EAQCKKKD-SETSVFTGIASQLLTIEDGKEPEEFSSDKLKKT--QILEKGASEGQKKKVD 160

Query: 248 AFLPTDSVQ 256
              PT +V+
Sbjct: 161 VSRPTTAVK 169



>EAY07777.1 on XP_829761  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 477

 Score = 25.0 bits (53), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 26/104 (25%), Positives = 48/104 (46%), Gaps = 19/104 (18%)

Query: 123 DIEQYNFADEFSRINQAFQVIENRIE---KNIPRAS----------QKTAKINANLDKHV 169
           +++   F D  S+INQA   +  ++E   + +P AS          Q+  ++    +   
Sbjct: 316 ELKTQEFGDAGSKINQALWHVVEKLEVAKEALPEASDRKLGSINSFQELTRVTGYYEALK 375

Query: 170 DQKLAMLADGVAKKITDLESKIKKQD--RAQTSHFKEALDKLKS 211
           DQ+L  L     K++T+L+   KK+   R Q  + K+  D  K+
Sbjct: 376 DQQLEKL----QKQLTELQETTKKKSKTREQICNEKKDADTCKA 415




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07779.1 hypothetical protein TVAG_000630 [Trichomonas
vaginalis G3]
         (66 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001610713  variant erythrocyte surface antigen-1, alpha subun...    24   0.76 
XP_812044   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   2.0  
XP_829783  VSG  (Establishment)  [Trypanosoma brucei]                  23   2.2  
XP_804648   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   3.4  
XP_001609667  variant erythrocyte surface antigen-1, alpha subun...    22   3.6  
XP_804553   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   3.6  
XP_812068   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   4.9  
XP_805710   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   5.5  
XP_001349438  PfEMP1  (Establishment)  [Plasmodium falciparum]         22   5.5  
XP_001349512  PfEMP1  (Establishment)  [Plasmodium falciparum]         22   5.9  

>EAY07779.1 on XP_001610713  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1294

 Score = 23.9 bits (50), Expect = 0.76,   Method: Composition-based stats.
 Identities = 12/32 (37%), Positives = 18/32 (56%)

Query: 4   EAKAEIEQKNNKLQMHLDNATAEIKDNKQNSI 35
           EAK E+E   N L   L+ A   +KD  Q+++
Sbjct: 681 EAKRELEGAKNGLNGKLEEAKDGLKDKLQDAM 712



>EAY07779.1 on XP_812044   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 855

 Score = 22.7 bits (47), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/32 (31%), Positives = 14/32 (43%)

Query: 29  DNKQNSIKTQDYPPKTSGECWVQAKSKQQEML 60
           DNK  ++   D  P T    WV  K  Q  ++
Sbjct: 614 DNKWETMFKDDKKPTTKSRPWVPKKEHQVALM 645



>EAY07779.1 on XP_829783  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 489

 Score = 22.7 bits (47), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 13/37 (35%), Positives = 19/37 (51%)

Query: 2   ANEAKAEIEQKNNKLQMHLDNATAEIKDNKQNSIKTQ 38
           A EA+ +IE  N  L++ L  A     +NK  +  TQ
Sbjct: 190 ATEAEIDIEMGNYDLELELSTALNSDSNNKCQTTTTQ 226



>EAY07779.1 on XP_804648   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 827

 Score = 22.3 bits (46), Expect = 3.4,   Method: Composition-based stats.
 Identities = 9/32 (28%), Positives = 14/32 (43%)

Query: 29  DNKQNSIKTQDYPPKTSGECWVQAKSKQQEML 60
           DNK  ++   +  P T    WV  K  Q  ++
Sbjct: 617 DNKWETMPKDETKPTTKSRPWVAKKEHQVALM 648



>EAY07779.1 on XP_001609667  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1303

 Score = 22.3 bits (46), Expect = 3.6,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 16/35 (45%)

Query: 10   EQKNNKLQMHLDNATAEIKDNKQNSIKTQDYPPKT 44
            ++   K    LD+    I  N+Q + + QD  P T
Sbjct: 1182 QKGTKKCHQFLDSLNGVIDKNRQGTTQKQDQHPLT 1216



>EAY07779.1 on XP_804553   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 827

 Score = 22.3 bits (46), Expect = 3.6,   Method: Composition-based stats.
 Identities = 10/32 (31%), Positives = 14/32 (43%)

Query: 29  DNKQNSIKTQDYPPKTSGECWVQAKSKQQEML 60
           DNK  +I   +  P T    WV  K  Q  ++
Sbjct: 616 DNKWETIVKGETKPTTESRPWVPKKEHQLALI 647



>EAY07779.1 on XP_812068   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 812

 Score = 21.9 bits (45), Expect = 4.9,   Method: Composition-based stats.
 Identities = 10/32 (31%), Positives = 13/32 (40%)

Query: 29  DNKQNSIKTQDYPPKTSGECWVQAKSKQQEML 60
           DNK  +I   D  P T    W   K  Q  ++
Sbjct: 598 DNKWETIFKDDKKPTTESRPWEPKKEHQVALM 629



>EAY07779.1 on XP_805710   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 753

 Score = 21.6 bits (44), Expect = 5.5,   Method: Composition-based stats.
 Identities = 10/32 (31%), Positives = 13/32 (40%)

Query: 29  DNKQNSIKTQDYPPKTSGECWVQAKSKQQEML 60
           DNK  +I   D  P T    W   K  Q  ++
Sbjct: 594 DNKWETISKGDKKPTTESRPWEPKKEYQVALM 625



>EAY07779.1 on XP_001349438  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2265

 Score = 21.6 bits (44), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 3/37 (8%)

Query: 16   LQMHLDNATAEIKD---NKQNSIKTQDYPPKTSGECW 49
            L+   +N TA  K+   + QN I T D PP  + + W
Sbjct: 1891 LEPSGNNTTASGKNTPSDTQNDIPTSDTPPPITDDEW 1927



>EAY07779.1 on XP_001349512  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2980

 Score = 21.6 bits (44), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 9/29 (31%), Positives = 18/29 (62%)

Query: 14   NKLQMHLDNATAEIKDNKQNSIKTQDYPP 42
            NKL+  +D    + + + +N+ + Q+YPP
Sbjct: 2412 NKLEKKIDECKQKHQASGKNTAQCQEYPP 2440




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07782.1 hypothetical protein TVAG_000660 [Trichomonas
vaginalis G3]
         (425 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351079  PfEMP1  (Establishment)  [Plasmodium falciparum]         32   0.098
XP_001351319  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   2.8  
XP_001351318  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   2.8  
XP_001352242  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   3.4  
XP_001350409  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   4.0  
XP_001349737  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   5.6  

>EAY07782.1 on XP_001351079  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2203

 Score = 31.6 bits (70), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 18/155 (11%)

Query: 156  LKRKEALQQGDYLLAEKCVNQSRALIA---LQNE-ERYEEIQTQRTDMITEKYNQCQNDF 211
            LKRKE    G   + +  ++     I+   L N+ E + +   +  DM  EK+N  +   
Sbjct: 2031 LKRKENESFGTNHVKQTSIHSVAKPISDDPLHNQLELFHKWLDRHRDMC-EKWNNKEELL 2089

Query: 212  QTIKEQWDQKLQAAAKQRDDSLKQLDINDSLELQEFDKVFDSPVP-SEFLKPSSTLLQLK 270
              +KE+W+ +  +      DS K L+ + S+++       D+P P +EF    + L  LK
Sbjct: 2090 DKLKEEWENETHSGNIHTSDSNKTLNTDVSIQIH-----MDNPKPINEFTNMDTILDDLK 2144

Query: 271  CREQ--YMVSSGRYAEAND-----VRSQALELEAQ 298
               +  Y V    Y + ND     V S A+++ ++
Sbjct: 2145 TYNEPYYDVQDDIYYDVNDQDVSTVDSNAMDVPSK 2179



>EAY07782.1 on XP_001351319  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2646

 Score = 26.9 bits (58), Expect = 2.8,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 32/74 (43%), Gaps = 5/74 (6%)

Query: 183  LQNEERYEEIQTQRTDMITEKYNQCQNDFQTIKEQWDQKLQAAAKQRDDSLKQLDINDSL 242
            L N+         R   + EK+N  +     +KE+W+ +  +      DS K L+ + S+
Sbjct: 2509 LHNQLELFHTWLDRHRNMCEKWNNKEELLDKLKEEWENETHSGNTHPSDSNKTLNTDVSI 2568

Query: 243  ELQEFDKVFDSPVP 256
            ++       D+P P
Sbjct: 2569 QID-----MDNPKP 2577



>EAY07782.1 on XP_001351318  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2169

 Score = 26.9 bits (58), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 5/69 (7%)

Query: 200  ITEKYNQCQNDFQTIKEQWDQKLQAAAKQRDDSLKQLDINDSLELQEFDKVFDSPVPSEF 259
            + EK+N  +     +KE+W+ +  +      DS K L+ + S+++       D+P P   
Sbjct: 2044 MCEKWNNKEEVLNKLKEEWENETHSGNTHTSDSNKTLNTDVSIQID-----MDNPKPINQ 2098

Query: 260  LKPSSTLLQ 268
                 T+L+
Sbjct: 2099 FTNMDTILE 2107



>EAY07782.1 on XP_001352242  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2264

 Score = 26.6 bits (57), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 8/101 (7%)

Query: 200  ITEKYNQCQNDFQTIKEQWDQKLQAAAKQRDDSLKQLDINDSLELQEFDKVFDSPVP-SE 258
            + EK+         +KE+W+ +  +      DS K L+ + S+++       D+P P ++
Sbjct: 2139 MCEKWENHHERLAKLKEEWENETHSGNTHTSDSNKTLNTDVSIQIH-----MDNPKPINQ 2193

Query: 259  FLKPSSTLLQL-KCREQYM-VSSGRYAEANDVRSQALELEA 297
            F    + L  L K +E Y  V    Y + ND  +  ++  A
Sbjct: 2194 FTNMDTILEDLEKYKEPYYDVQDDIYYDVNDHDASVVDSNA 2234



>EAY07782.1 on XP_001350409  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2223

 Score = 26.6 bits (57), Expect = 4.0,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 8/63 (12%)

Query: 200  ITEKYNQCQNDFQTIKEQWDQKLQAAAKQRDDSLK--------QLDINDSLELQEFDKVF 251
            + EK+N  +     +KE+W+ +  +      DS K        Q+D+N+     EF  V 
Sbjct: 2074 MCEKWNNKEELLDKLKEEWENETHSGNTHPSDSNKTLNTDVSIQIDMNNPKTTNEFTYVD 2133

Query: 252  DSP 254
              P
Sbjct: 2134 SKP 2136



>EAY07782.1 on XP_001349737  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2199

 Score = 25.8 bits (55), Expect = 5.6,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 5/69 (7%)

Query: 200  ITEKYNQCQNDFQTIKEQWDQKLQAAAKQRDDSLKQLDINDSLELQEFDKVFDSPVPSEF 259
            + EK+         +KE+W+ +  +      DS K L+ + S+++       D+P P   
Sbjct: 2071 MCEKWENHHERLAKLKEEWENETHSGNTHPSDSNKTLNTDVSIQIH-----MDNPKPINQ 2125

Query: 260  LKPSSTLLQ 268
                 T+L+
Sbjct: 2126 FTNMDTILE 2134




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07784.1 hypothetical protein TVAG_000680 [Trichomonas
vaginalis G3]
         (462 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609163  variant erythrocyte surface antigen-1, alpha subun...    33   0.050
XP_001609101  variant erythrocyte surface antigen-1, alpha subun...    33   0.051
XP_807802   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.89 
ACB87908  Rh5  (Adhesin)  [Plasmodium falciparum]                      26   6.3  

>EAY07784.1 on XP_001609163  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1360

 Score = 32.7 bits (73), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 30/120 (25%), Positives = 47/120 (39%), Gaps = 12/120 (10%)

Query: 105 KTKVINLPKKFIDLIQDYF--IKSVIPSYEPFKKEFSDYIGSLIATVKAFPDSEVYINPI 162
           K K +   KK ++  ++     K    + E  K E     G+L    KAFP S   I+P 
Sbjct: 736 KVKALEEIKKTLEAAKEKLEEAKKTQEALEAAKGELEGAKGALTTAKKAFPGSSSDIDPC 795

Query: 163 INEITPIAKGLNVEVNMNQQPKKPELFNQINNDLRKVESLFDFDTLTEQISSIMNTLDVI 222
            N ++    GL+  + + +     +   QI    RK     D     + I S   T DV+
Sbjct: 796 KNIVSATIDGLHKALQLLK-----DAVQQIMEATRK-----DTTEFQDAIFSATYTADVV 845



>EAY07784.1 on XP_001609101  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1359

 Score = 32.7 bits (73), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 30/120 (25%), Positives = 47/120 (39%), Gaps = 12/120 (10%)

Query: 105 KTKVINLPKKFIDLIQDYF--IKSVIPSYEPFKKEFSDYIGSLIATVKAFPDSEVYINPI 162
           K K +   KK ++  ++     K    + E  K E     G+L    KAFP S   I+P 
Sbjct: 736 KVKALEEIKKTLEAAKEKLEEAKKTQEALEAAKGELEGAKGALTTAKKAFPGSSSDIDPC 795

Query: 163 INEITPIAKGLNVEVNMNQQPKKPELFNQINNDLRKVESLFDFDTLTEQISSIMNTLDVI 222
            N ++    GL+  + + +     +   QI    RK     D     + I S   T DV+
Sbjct: 796 KNIVSATIDGLHKALQLLK-----DAVQQIMEATRK-----DTTEFQDAIFSATYTADVV 845



>EAY07784.1 on XP_807802   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 805

 Score = 28.5 bits (62), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 6/76 (7%)

Query: 6   CKKAKQENQLISCYMFEFHQGNHPEIFWKYGKQIEFLDDIMWYTVTTPIAQDSKLCSPEC 65
           CKK       I+  +    +GN PE   K  K  +FL++     VT+P  +  ++     
Sbjct: 110 CKKGGDSFTGIASQLLTMDKGNEPEEVLKDAKDTQFLEE-----VTSPEGK-KRVGVSRP 163

Query: 66  SIFVTTFDHYKLYSFY 81
           +  V   D Y L   Y
Sbjct: 164 TTAVKGSDIYMLVGKY 179



>EAY07784.1 on ACB87908  Rh5  (Adhesin)  [Plasmodium falciparum]
          Length = 526

 Score = 25.8 bits (55), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 121 DYFIKSVIPSYEPFKKEFSDYIGSLIATVKAFP 153
           D FIK +  +Y+  K + +D    LIAT+K   
Sbjct: 207 DAFIKKINETYDKVKSKCNDIKNDLIATIKKLE 239




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07785.1 Ubiquitin-conjugating enzyme family protein
[Trichomonas vaginalis G3]
         (173 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_809960   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.0  
XP_808201   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   3.7  
XP_813500   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   9.2  

>EAY07785.1 on XP_809960   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 890

 Score = 26.6 bits (57), Expect = 1.0,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 17/36 (47%)

Query: 41  IEGLKDTPYEGGEFHLSITIPPKYPNVPPTIKFKTP 76
           I+ LK+ P E         IPP +P  P   K +TP
Sbjct: 718 IQLLKENPSEPSTVSSDSIIPPSHPVTPNAQKTETP 753



>EAY07785.1 on XP_808201   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1044

 Score = 24.6 bits (52), Expect = 3.7,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 18/38 (47%)

Query: 131 IAQEFTENKAKFLETAKKWTDVHAKPNSITKGNEAAIE 168
           +A   TE   +  E  KKW D+     +   G+ AA++
Sbjct: 450 VAVRLTEKLERIKEVVKKWKDLDRALKTCRSGSSAAVD 487



>EAY07785.1 on XP_813500   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 898

 Score = 23.5 bits (49), Expect = 9.2,   Method: Composition-based stats.
 Identities = 9/23 (39%), Positives = 12/23 (52%)

Query: 147 KKWTDVHAKPNSITKGNEAAIEM 169
           K W D +   N+  KGN+   EM
Sbjct: 522 KTWKDEYLGVNATVKGNDGGAEM 544




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07786.1 hypothetical protein TVAG_000700 [Trichomonas
vaginalis G3]
         (235 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ABY61052  Calcineurin catalytic subunit  (Invasion)  [Trypanosom...    29   0.034
CAJ20707  Toxopain-2  (Protease)  [Toxoplasma gondii]                  27   1.4  
XP_808064   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.5  
XP_803401  VSG  (Establishment)  [Trypanosoma brucei]                  26   1.9  
XP_812069   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   2.4  
XP_808957   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   8.4  
XP_827760  VSG  (Establishment)  [Trypanosoma brucei]                  24   9.5  

>EAY07786.1 on ABY61052  Calcineurin catalytic subunit  (Invasion)  [Trypanosoma
           cruzi]
          Length = 70

 Score = 29.3 bits (64), Expect = 0.034,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 17/23 (73%)

Query: 154 LIKERGIPAAQPPPPFIVKKPKL 176
           +  ERG+P+ +PPP F ++K +L
Sbjct: 1   MYSERGLPSVEPPPLFPLEKDRL 23



>EAY07786.1 on CAJ20707  Toxopain-2  (Protease)  [Toxoplasma gondii]
          Length = 255

 Score = 26.6 bits (57), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 9/20 (45%), Positives = 13/20 (65%)

Query: 152 ANLIKERGIPAAQPPPPFIV 171
             L + RG+ A +P PPF+V
Sbjct: 22  GELHQRRGVRAGRPSPPFVV 41



>EAY07786.1 on XP_808064   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 718

 Score = 26.6 bits (57), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 16/23 (69%)

Query: 124 TMKARENTLKKCEAVASTPALVR 146
           T  A++N L++C ++AS  AL R
Sbjct: 451 TWAAKDNALRRCSSIASGAALSR 473



>EAY07786.1 on XP_803401  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 493

 Score = 26.2 bits (56), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 28/65 (43%)

Query: 65  NSDVMVITPHEPYNPQAIYVSNKNEHDPDFRRDFYDSELPWDARATIDTKLESKQFKERT 124
           N + M IT    YN  A  +    +     R  FY S+L     A    KL+  +FK+ T
Sbjct: 343 NVNDMPITGILKYNTDAKSLGQITDISELLRLYFYYSDLNKQKLAETAKKLQEAEFKKET 402

Query: 125 MKARE 129
             A+E
Sbjct: 403 KSAKE 407



>EAY07786.1 on XP_812069   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 948

 Score = 25.8 bits (55), Expect = 2.4,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 16/23 (69%)

Query: 124 TMKARENTLKKCEAVASTPALVR 146
           T  A++N L++C ++AS  AL R
Sbjct: 451 TWAAKDNALRQCSSIASGAALSR 473



>EAY07786.1 on XP_808957   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1446

 Score = 24.3 bits (51), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 11/23 (47%), Positives = 15/23 (65%)

Query: 124 TMKARENTLKKCEAVASTPALVR 146
           T  A++N L KC ++AS  AL R
Sbjct: 451 TWAAKDNALGKCSSIASDAALSR 473



>EAY07786.1 on XP_827760  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 536

 Score = 23.9 bits (50), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 1/66 (1%)

Query: 164 QPPPPFIVKKPKLSEG-TAKHLKQFASTKYYHDGAYRYCEALGGEAWSCCGNTDRDSIGC 222
           +PP  +      L+ G   K+ K   +   +  G+  +    GG A S    T   +I C
Sbjct: 171 KPPQEYAAALKTLAYGDKTKNRKTVTAADAFKGGSTSFSTDCGGAAASNKIKTVAATITC 230

Query: 223 CCQKSN 228
            C K+N
Sbjct: 231 LCHKAN 236




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07787.1 hypothetical protein TVAG_000710 [Trichomonas
vaginalis G3]
         (315 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001608668  variant erythrocyte surface antigen-1, alpha subun...    32   0.069
XP_001609666  variant erythrocyte surface antigen-1, alpha subun...    29   0.49 
XP_001609034  variant erythrocyte surface antigen-1, alpha subun...    28   0.70 
XP_821133   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   3.9  

>EAY07787.1 on XP_001608668  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1337

 Score = 31.6 bits (70), Expect = 0.069,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 43/74 (58%)

Query: 203 EFLKQEIIFQKENDQQSIEKMDQDLLLLAEELDSAKKKLISSRSAGIQSRMNELMVQLNI 262
           E +KQ++   K+  +++ E ++ ++ +  +EL+ AKK +  +++ G   RM +L  ++  
Sbjct: 718 EGVKQKLGEAKKELEKAKEAVESEVGMDGKELEEAKKAVEKAKTEGDNVRMAKLEKKMKA 777

Query: 263 ILDRKNELNSEIES 276
           + + K+ LN  + S
Sbjct: 778 LENAKDALNKLMTS 791



>EAY07787.1 on XP_001609666  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1269

 Score = 28.9 bits (63), Expect = 0.49,   Method: Composition-based stats.
 Identities = 25/95 (26%), Positives = 51/95 (53%), Gaps = 9/95 (9%)

Query: 174 PLDQQEIYQMKEQIKLKHLFLTKKYDELDEFLKQ------EIIFQKENDQQSIEKMDQDL 227
           P++     ++KE  K+     + K D L E LK       E++ Q  N Q+++E  D+D+
Sbjct: 580 PMEHDRKSRVKELKKILWKVPSGK-DTLAEKLKDVLEKIGEVVVQLGNAQEALETKDKDV 638

Query: 228 L-LLAEELDSAKKKLISSRSAGIQSRMNELMVQLN 261
           +  + E L  AK+ L ++++ G++ ++ E   +L+
Sbjct: 639 IEKVKEALRKAKEGLETAKN-GLKDKLEEAKKKLD 672




 Score = 25.0 bits (53), Expect = 8.0,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 12/72 (16%)

Query: 239 KKLISSRSAGIQSRMNELMVQL------------NIILDRKNELNSEIESLVAEKSKSEF 286
           K  ++ +   +  ++ E++VQL            ++I   K  L    E L   K+  + 
Sbjct: 603 KDTLAEKLKDVLEKIGEVVVQLGNAQEALETKDKDVIEKVKEALRKAKEGLETAKNGLKD 662

Query: 287 QLQESKSKLEEL 298
           +L+E+K KL+EL
Sbjct: 663 KLEEAKKKLDEL 674



>EAY07787.1 on XP_001609034  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1313

 Score = 28.1 bits (61), Expect = 0.70,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 61/116 (52%), Gaps = 14/116 (12%)

Query: 201 LDEFLKQ--EIIFQKENDQQSIEKMDQDLLLLAEELDSAKKKLISSRSAGIQSRMNELMV 258
           L E L++  +++ Q  N Q+++EK          ++++ K  + + + AG+++  ++L  
Sbjct: 666 LKELLQRIGDVVVQLGNAQEALEK----------DINNEKVAVAAVKKAGVKNGSSDLSG 715

Query: 259 QLNIILDRKNELNSEIESLVAEKSKSEFQ--LQESKSKLEELQQRLSVLQNIKKSM 312
            L  +LD+ NE   E+E +V EK+  E    L ++K+ LE  ++ +    N K  +
Sbjct: 716 VLREVLDKVNEKVKELEKVVTEKADGETSQALSKAKTALERAKEMVKNDGNKKNKL 771



>EAY07787.1 on XP_821133   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 896

 Score = 25.8 bits (55), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 8/59 (13%)

Query: 130 IISQIKENVKDASLVEQVHVLIDLNKKVSDMRKTVVEK--KIELERP---LDQQEIYQM 183
           I SQI   +K  S+V +  VL D N K   + + V EK  K+++ RP   +   +IY +
Sbjct: 128 IASQI---IKQGSVVGKEEVLKDANTKTKVLEEGVSEKKEKVDVSRPTTVVKGNDIYML 183




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07789.1 hypothetical protein TVAG_000730 [Trichomonas
vaginalis G3]
         (125 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07791.1 Prefoldin subunit family protein [Trichomonas
vaginalis G3]
         (171 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001705755  ADI  (Others)  [Giardia duodenalis]                      25   2.0  

>EAY07791.1 on XP_001705755  ADI  (Others)  [Giardia duodenalis]
          Length = 255

 Score = 25.4 bits (54), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 9/14 (64%), Positives = 12/14 (85%)

Query: 140 SKNLIFLRDQIITT 153
           S N++F+RDQ ITT
Sbjct: 167 SNNMVFMRDQQITT 180




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07795.1 TKL family protein kinase [Trichomonas
vaginalis G3]
         (347 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    28   0.48 
XP_818308   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   5.1  
XP_001611206  variant erythrocyte surface antigen-1, alpha subun...    25   7.1  

>EAY07795.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 28.5 bits (62), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 1/38 (2%)

Query: 206 SGISYIHHKNIVHCNIKPSNILMSID-GIPKLCDFGRA 242
             ++Y H + I+H +IKP N+++  +  I +L D+G A
Sbjct: 158 KAMNYCHSQGIMHRDIKPHNVMIDHEKKILRLIDWGLA 195



>EAY07795.1 on XP_818308   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 925

 Score = 25.8 bits (55), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 4/89 (4%)

Query: 261 AAPEFP-ENIATSCDVYSFALISVLALTGSDETKLAEIKENFPQMEDVPEQVVSIIKECL 319
           A P +  E+IA   ++ SF +  +L + GSD   +AE +      ED    + S +    
Sbjct: 71  AVPRYQLEDIADG-NLESFGIPGLLKV-GSDVFAVAEAQCKKKDGEDAFTGIASQLLTIK 128

Query: 320 DEN-PENRPQIDSVIDVFESASNELSEIE 347
           D+N PE  P++  VI V E +++   +++
Sbjct: 129 DDNTPEEAPKVARVIRVLEKSTSTSKKVD 157



>EAY07795.1 on XP_001611206  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1285

 Score = 25.0 bits (53), Expect = 7.1,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 28/43 (65%), Gaps = 3/43 (6%)

Query: 198 LDLLADAASGISYIHHKNIVHCNIKP--SNILMSIDGIPKLCD 238
           L  + +A + ++  + KN V C++K   +NILM+ID + ++C+
Sbjct: 758 LRYVVEALNKLAKQNEKN-VECHVKGPYNNILMAIDHLQEICN 799




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07797.1 hypothetical protein TVAG_000810 [Trichomonas
vaginalis G3]
         (412 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_806731   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.2  
XP_812517   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.3  
XP_001609618  variant erythrocyte surface antigen-1, alpha subun...    27   3.4  
XP_808836   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   7.4  
XP_816720   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   7.9  
XP_806729   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   8.6  
XP_001351321  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   9.6  

>EAY07797.1 on XP_806731   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 479

 Score = 26.9 bits (58), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 3/68 (4%)

Query: 347 EKKIEEQSNAAYAKLYSENISFVDSEDAKLEEGKV---ILGLVMKEQDNISVPEEKKYAV 403
           E +  E SN+ +A + SE + + D E  +L+  K+   +L     E+   + P+  + AV
Sbjct: 77  EAQCTEASNSGFAGIASELLEWTDKESKELDTTKLKTQVLEECQFERGKCTSPKGAQDAV 136

Query: 404 AVPLVELH 411
           +    ++H
Sbjct: 137 SQSDTKVH 144



>EAY07797.1 on XP_812517   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 924

 Score = 26.9 bits (58), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 19/87 (21%), Positives = 40/87 (45%), Gaps = 13/87 (14%)

Query: 281 VDLKTVRVDLINKDFTQERFNR-------------QLEQGLVFALVKADNGVKVITESGE 327
           VD+KTV + + +KD T  + ++             + E+G +  +   D G + + ESG+
Sbjct: 266 VDVKTVSLIIYSKDNTNWKLSKGMSDGGCSDPSVVEWEEGKLIMMAACDGGRRRVYESGD 325

Query: 328 TVVAEAELEQKLTEILDAREKKIEEQS 354
              +  E    L+ +    +K  +E++
Sbjct: 326 KGESWTEALGTLSRVWGNNKKGGKEKA 352



>EAY07797.1 on XP_001609618  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1325

 Score = 26.6 bits (57), Expect = 3.4,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 14/75 (18%)

Query: 311 ALVKADNGVKVITESGETVVAEA---------ELEQKLTEILDAREKKIEEQSN-----A 356
           AL KA N      + G+  ++EA         E+E++L E+L+  +  ++E +N      
Sbjct: 769 ALEKATNKDGKEVDPGKNKISEAINKVLEMLKEMEKQLKEVLEKEQSNMDENTNLNGHEK 828

Query: 357 AYAKLYSENISFVDS 371
            + K   E IS  +S
Sbjct: 829 GFHKAIKELISICNS 843



>EAY07797.1 on XP_808836   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 376

 Score = 25.4 bits (54), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 11/35 (31%), Positives = 20/35 (57%)

Query: 347 EKKIEEQSNAAYAKLYSENISFVDSEDAKLEEGKV 381
           E +  E SN+ +A + SE + + D E  +L+  K+
Sbjct: 115 EAQCTETSNSGFAGIASELLEWTDKESKELDTTKL 149



>EAY07797.1 on XP_816720   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 782

 Score = 25.4 bits (54), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 11/41 (26%), Positives = 22/41 (53%)

Query: 341 EILDAREKKIEEQSNAAYAKLYSENISFVDSEDAKLEEGKV 381
           ++    E +  E SN+ +A + SE + + D E  +L+  K+
Sbjct: 109 DVFAVAEAQCTEASNSGFAGIASELLEWTDKESKELDTTKL 149



>EAY07797.1 on XP_806729   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 499

 Score = 25.0 bits (53), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 11/35 (31%), Positives = 20/35 (57%)

Query: 347 EKKIEEQSNAAYAKLYSENISFVDSEDAKLEEGKV 381
           E +  E SN+ +A + SE + + D E  +L+  K+
Sbjct: 115 EAQCTEASNSGFAGIASELLEWTDKESKELDTTKL 149



>EAY07797.1 on XP_001351321  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3467

 Score = 25.0 bits (53), Expect = 9.6,   Method: Composition-based stats.
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 4/54 (7%)

Query: 306  QGLVFALVKADNGVKVITESGET---VVAEAELEQKLTEILDAREKKIEEQSNA 356
            +G+++AL   DNG K I +  E    +  EA  + K T+    +  K+EE S A
Sbjct: 2375 KGMIYALTYKDNGEKKIVKDNEVYKKLWDEANKKPKETK-YQYKNVKLEENSGA 2427




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07799.1 hypothetical protein TVAG_000830 [Trichomonas
vaginalis G3]
         (412 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_820473   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.89 
XP_001349737  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   3.3  
XP_001350798  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   9.8  

>EAY07799.1 on XP_820473   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 846

 Score = 28.5 bits (62), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 3/45 (6%)

Query: 255 PYRHPEGNFRYIKSPAIKITRRIENKNKTDQIDFEKPFKEFRNHT 299
           P RHP     +    A+K+T   E K K  Q+D  +P    +  T
Sbjct: 695 PIRHPAAEELHT---AVKVTATEEEKQKVGQLDVAQPAAALQTAT 736



>EAY07799.1 on XP_001349737  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2199

 Score = 26.6 bits (57), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 12/32 (37%), Positives = 19/32 (59%)

Query: 278  ENKNKTDQIDFEKPFKEFRNHTNGTPFRIYEL 309
            ENK   D+IDF+KP   F++  N  P   +++
Sbjct: 1388 ENKKAEDEIDFKKPDDTFKDADNCKPCSEFKI 1419



>EAY07799.1 on XP_001350798  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2359

 Score = 25.0 bits (53), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 266  IKSPAIKITRRIENKNKTDQIDFEKPFKEFRNHTNGTPFRIYEL 309
            +KS   K    +E+  K D++DF KP + F   TN  P   +++
Sbjct: 1499 LKSGPCKNNENVEDNGK-DKLDFSKPNETFVPATNCKPCSSFKI 1541




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07801.1 hypothetical protein TVAG_000850 [Trichomonas
vaginalis G3]
         (333 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001608668  variant erythrocyte surface antigen-1, alpha subun...    29   0.45 
XP_843649  VSG  (Establishment)  [Trypanosoma brucei]                  26   3.0  
XP_001608670  variant erythrocyte surface antigen-1, alpha subun...    25   7.5  

>EAY07801.1 on XP_001608668  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1337

 Score = 28.9 bits (63), Expect = 0.45,   Method: Composition-based stats.
 Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 18/114 (15%)

Query: 95  RISTARSALQTKISSNTQQYNTEIENYKNK---RMKELQKIKESHEEQLQEFSNHWKDPK 151
           ++  A+ AL+ K  S        IE  K K     KEL+K KE+ E ++       ++ K
Sbjct: 700 QLGNAQEALEGKAESKV------IEGVKQKLGEAKKELEKAKEAVESEVGMDGKELEEAK 753

Query: 152 TMLEFAKPSPQLLNLRNIEKKQVILGDYQGAEIVRQRAVDLEKIETKNANNRAI 205
             +E AK     + +  +EKK   L + + A         L K+ T   +N A+
Sbjct: 754 KAVEKAKTEGDNVRMAKLEKKMKALENAKDA---------LNKLMTSGGSNGAL 798



>EAY07801.1 on XP_843649  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 509

 Score = 26.2 bits (56), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 7/87 (8%)

Query: 205 IAKMNVDYQNLLRKQQAEIDNFNKRTELQIQF-------FESQKNSSVAAISTQIRLNST 257
           +A  +V Y     +Q+ ++   +K  +L I          ESQ   +  A+ST  + N T
Sbjct: 367 LANQDVKYTKAGNEQEKKLGALSKGADLSIALSFIINKRHESQLQKAAKAVSTVPKQNCT 426

Query: 258 DPPRHTRKRKISYDQIYQKSKARPKSE 284
              +   K    +     K + +PK E
Sbjct: 427 GKTKEKCKDACEWKGTDDKGECKPKDE 453



>EAY07801.1 on XP_001608670  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1320

 Score = 25.0 bits (53), Expect = 7.5,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 24/48 (50%)

Query: 95  RISTARSALQTKISSNTQQYNTEIENYKNKRMKELQKIKESHEEQLQE 142
           ++  A+ AL+ K     +    ++E  K K   EL K+K+    +LQE
Sbjct: 701 QLGNAQEALEGKDKEGIKGVIKKLEEAKGKLETELTKVKDRLNGKLQE 748




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07809.1 hypothetical protein TVAG_312080 [Trichomonas
vaginalis G3]
         (402 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609315  variant erythrocyte surface antigen-1, alpha subun...    28   0.97 
XP_829775  VSG  (Establishment)  [Trypanosoma brucei]                  25   6.7  
XP_001609751  variant erythrocyte surface antigen-1, alpha subun...    25   7.6  
XP_001349513  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   7.9  

>EAY07809.1 on XP_001609315  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1338

 Score = 28.1 bits (61), Expect = 0.97,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 44/109 (40%), Gaps = 11/109 (10%)

Query: 35  DAMEQHKQTAIANGQVERVRKLQSIMAELSKLDRKRKSIGK--------HKAKSEKSTSR 86
           D M+ ++ T   N ++E +  ++ +   L+ +D     +G         H  K  K    
Sbjct: 818 DKMKGNEPT---NNKIELISFIKELKEFLNIIDDMFDIVGSTRCVHCRDHSTKCGKEPVS 874

Query: 87  SIDTTTEDSHKEITPAVVESVLADIMDGFPLDVAENYLLPSLIQAARDH 135
               T    + + TP+ +++ L D + GF  DV  +   P     A DH
Sbjct: 875 KYCNTCHQQYMDGTPSPLQAFLEDRLPGFSCDVVRDIEDPDKYPPAADH 923



>EAY07809.1 on XP_829775  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 503

 Score = 25.4 bits (54), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 8/42 (19%)

Query: 10  TRLVRELVGGKPVSE-----VNPKIIPQVID---AMEQHKQT 43
           T  V  LVGGKP SE      NP+ I + I    A  Q KQT
Sbjct: 369 TAAVTLLVGGKPKSEKLNTITNPENIAKAISYLAATNQIKQT 410



>EAY07809.1 on XP_001609751  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1298

 Score = 25.4 bits (54), Expect = 7.6,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 6/63 (9%)

Query: 152 EDVGNTLVALSNERMVEMKKNEKREALVYQFTQAEEALRKENESLRQALEDHDERSKAAE 211
           E +G+ +V L N +     K++K           +EAL+   E L  A    DE  K A+
Sbjct: 639 EKIGDVVVQLGNAQEALEGKDKK------AIEGVKEALQVAKEGLDTAKNGLDEELKEAK 692

Query: 212 DAL 214
           D L
Sbjct: 693 DKL 695



>EAY07809.1 on XP_001349513  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2858

 Score = 25.4 bits (54), Expect = 7.9,   Method: Composition-based stats.
 Identities = 13/31 (41%), Positives = 19/31 (61%)

Query: 272 QKEIEEVKAIHEKYLKQRKIQRNKLVESFDQ 302
           +K+ EE K I E+YLK  KI+ N    S ++
Sbjct: 613 KKKGEEWKKIKERYLKDYKIEDNNSSNSLNK 643




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07816.1 hypothetical protein TVAG_312150 [Trichomonas
vaginalis G3]
         (217 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001348165  RESA  (Others)  [plasmodium falciparum]                  24   6.6  

>EAY07816.1 on XP_001348165  RESA  (Others)  [plasmodium falciparum]
          Length = 1085

 Score = 24.3 bits (51), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)

Query: 6   VISSKQLKSITPLLTFIIDGVKLYPHSKYPRPLLVTDEEEFESQKITKKDIITEQLYHVL 65
           V SS+Q+ SIT     I   V     SK    L  TD++E     I +K I++  +   L
Sbjct: 749 VGSSEQMNSITYNFENINSNVDNGNQSKNISDLSYTDQKE-----ILEK-IVSYIVDISL 802

Query: 66  YFLQNTALNLSGQ 78
           Y ++NTALN + Q
Sbjct: 803 YDIENTALNAAEQ 815




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07822.1 CAMK family protein kinase [Trichomonas
vaginalis G3]
         (191 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    32   0.013

>EAY07822.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 32.3 bits (72), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%)

Query: 18  YLKLPTQEIWKVFAHIISAVAYIHSKSYMHLDISPSNILQCSHPIVGNIYKLADFG 73
           Y  L  Q+I      ++ A+ Y HS+  MH DI P N++   H     I +L D+G
Sbjct: 141 YPTLTIQDIKYYIYQLLKAMNYCHSQGIMHRDIKPHNVM-IDHE--KKILRLIDWG 193




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07832.1 oxidoreductase, aldo/keto reductase family
protein [Trichomonas vaginalis G3]
         (312 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_965997  PfEMP1  (Establishment)  [Plasmodium falciparum]            28   1.1  
XP_001347692  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   2.9  
AAK49521  BAEBL/EBP2  (Adhesin)  [Plasmodium falciparum]               26   3.4  

>EAY07832.1 on XP_965997  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2879

 Score = 27.7 bits (60), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 265  KSNYELDFTLTEQQMKKLEELDRFYSFYDYAD-FFGVDI 302
            K N E D  L E ++    +   FY+F DY D FFG DI
Sbjct: 1348 KINTEADKELKEGKIPDEFKRQMFYTFGDYRDIFFGTDI 1386



>EAY07832.1 on XP_001347692  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2994

 Score = 26.2 bits (56), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 12/20 (60%), Positives = 13/20 (65%), Gaps = 1/20 (5%)

Query: 288 FYSFYDYADF-FGVDILNLG 306
           FY+F DY DF FG DI  L 
Sbjct: 975 FYTFGDYRDFLFGTDISKLN 994



>EAY07832.1 on AAK49521  BAEBL/EBP2  (Adhesin)  [Plasmodium falciparum]
          Length = 1210

 Score = 26.2 bits (56), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 15/86 (17%)

Query: 182 NIYRQFKPLLSYCESHNIYLMAHTTIGHPPLKGPFGTSLLEDPVVKQVASEAKKTSAQIC 241
           +I R   P L+     NIY   +  + +  +      S +E+  VK+  S          
Sbjct: 40  DISRVNSPELNNNHKTNIYDSDYEDVNNKLI-----NSFVENKSVKKKRS---------- 84

Query: 242 LKFLQQKSKMYILIPMSMNPKNIKSN 267
           L F+  K+K Y +IP S + +N K N
Sbjct: 85  LSFINNKTKSYDIIPPSYSYRNDKFN 110




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07841.1 hypothetical protein TVAG_312400 [Trichomonas
vaginalis G3]
         (392 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07842.1 hypothetical protein TVAG_312410 [Trichomonas
vaginalis G3]
         (241 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAK49521  BAEBL/EBP2  (Adhesin)  [Plasmodium falciparum]               26   2.6  
XP_812309   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   3.7  
AAM45258  BAEBL/EBP2  (Adhesin)  [Plasmodium falciparum]               24   8.6  
AAM45255  BAEBL/EBP2  (Adhesin)  [Plasmodium falciparum]               24   9.4  
AAM45250  BAEBL/EBP2  (Adhesin)  [Plasmodium falciparum]               24   9.5  
AAM45253  BAEBL/EBP2  (Adhesin)  [Plasmodium falciparum]               24   9.6  
AAL23761  BAEBL/EBP2  (Adhesin)  [Plasmodium falciparum]               24   9.6  

>EAY07842.1 on AAK49521  BAEBL/EBP2  (Adhesin)  [Plasmodium falciparum]
          Length = 1210

 Score = 25.8 bits (55), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 20/101 (19%)

Query: 13  QEKLLDQNINDKKEELLKIDRKRKVLQSMCDQLQVQKAELIDKINKLNESHHKKREEARD 72
           +E LL  +I   + +LLK   K K   ++C  +Q   A+L D I        K  +  +D
Sbjct: 505 KEHLLGASI--YEAQLLKYKYKEKDENALCSIIQNSYADLADII--------KGSDIIKD 554

Query: 73  HFGRKLNNLDILMNRYIEPLNKVKFKNSLLHERRKYLAERW 113
           ++G+K+           E LNKV        E  K   E+W
Sbjct: 555 YYGKKME----------ENLNKVNKDKKRNEESLKIFREKW 585



>EAY07842.1 on XP_812309   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 827

 Score = 25.4 bits (54), Expect = 3.7,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 14/70 (20%)

Query: 19  QNINDKKEELLKIDRKRK--------VLQSMCDQLQVQK------AELIDKINKLNESHH 64
           +N N+KKEEL+ +  K+K        V   + +QLQ  K       E+  ++++L  S  
Sbjct: 423 ENTNEKKEELIALYEKKKDGKPSPGMVSVLLAEQLQRVKEVLTTWKEVDGRVSQLCTSLS 482

Query: 65  KKREEARDHF 74
            +++ + D F
Sbjct: 483 AQKDASTDDF 492



>EAY07842.1 on AAM45258  BAEBL/EBP2  (Adhesin)  [Plasmodium falciparum]
          Length = 616

 Score = 24.3 bits (51), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 10/66 (15%)

Query: 13  QEKLLDQNINDKKEELLKIDRKRKVLQSMCDQLQVQKAELIDKINKLNESHHKKREEARD 72
           +E LL  +I +   +LLK   K K   ++C  +Q   A+L D I        K  +  +D
Sbjct: 365 KEHLLGASIYE--AQLLKYKYKEKDENALCSIIQNSYADLADII--------KGSDIIKD 414

Query: 73  HFGRKL 78
           ++G+K+
Sbjct: 415 YYGKKM 420



>EAY07842.1 on AAM45255  BAEBL/EBP2  (Adhesin)  [Plasmodium falciparum]
          Length = 616

 Score = 24.3 bits (51), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 10/66 (15%)

Query: 13  QEKLLDQNINDKKEELLKIDRKRKVLQSMCDQLQVQKAELIDKINKLNESHHKKREEARD 72
           +E LL  +I +   +LLK   K K   ++C  +Q   A+L D I        K  +  +D
Sbjct: 365 KEHLLGASIYE--AQLLKYKYKEKDENALCSIIQNSYADLADII--------KGSDIIKD 414

Query: 73  HFGRKL 78
           ++G+K+
Sbjct: 415 YYGKKM 420



>EAY07842.1 on AAM45250  BAEBL/EBP2  (Adhesin)  [Plasmodium falciparum]
          Length = 616

 Score = 23.9 bits (50), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 10/66 (15%)

Query: 13  QEKLLDQNINDKKEELLKIDRKRKVLQSMCDQLQVQKAELIDKINKLNESHHKKREEARD 72
           +E LL  +I +   +LLK   K K   ++C  +Q   A+L D I        K  +  +D
Sbjct: 365 KEHLLGASIYE--AQLLKYKYKEKDENALCSIIQNSYADLADII--------KGSDIIKD 414

Query: 73  HFGRKL 78
           ++G+K+
Sbjct: 415 YYGKKM 420



>EAY07842.1 on AAM45253  BAEBL/EBP2  (Adhesin)  [Plasmodium falciparum]
          Length = 616

 Score = 23.9 bits (50), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 10/66 (15%)

Query: 13  QEKLLDQNINDKKEELLKIDRKRKVLQSMCDQLQVQKAELIDKINKLNESHHKKREEARD 72
           +E LL  +I +   +LLK   K K   ++C  +Q   A+L D I        K  +  +D
Sbjct: 365 KEHLLGASIYE--AQLLKYKYKEKDENALCSIIQNSYADLADII--------KGSDIIKD 414

Query: 73  HFGRKL 78
           ++G+K+
Sbjct: 415 YYGKKM 420



>EAY07842.1 on AAL23761  BAEBL/EBP2  (Adhesin)  [Plasmodium falciparum]
          Length = 616

 Score = 23.9 bits (50), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 10/66 (15%)

Query: 13  QEKLLDQNINDKKEELLKIDRKRKVLQSMCDQLQVQKAELIDKINKLNESHHKKREEARD 72
           +E LL  +I +   +LLK   K K   ++C  +Q   A+L D I        K  +  +D
Sbjct: 365 KEHLLGASIYE--AQLLKYKYKEKDENALCSIIQNSYADLADII--------KGSDIIKD 414

Query: 73  HFGRKL 78
           ++G+K+
Sbjct: 415 YYGKKM 420




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07843.1 hypothetical protein TVAG_312420 [Trichomonas
vaginalis G3]
         (95 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609565  variant erythrocyte surface antigen-1, alpha subun...    23   3.3  
XP_001349513  PfEMP1  (Establishment)  [Plasmodium falciparum]         22   7.9  
XP_820307   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   8.7  

>EAY07843.1 on XP_001609565  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1341

 Score = 23.5 bits (49), Expect = 3.3,   Method: Composition-based stats.
 Identities = 8/11 (72%), Positives = 8/11 (72%)

Query: 11  KSKKWDDPNPS 21
           K  KWDDPN S
Sbjct: 168 KCMKWDDPNQS 178



>EAY07843.1 on XP_001349513  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2858

 Score = 22.3 bits (46), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 14/58 (24%), Positives = 28/58 (48%)

Query: 28   QSEHYDAFIPNTSGFKMQKIVNLIEKDGKLFLEVEIPNEPETREVDLNMMRIMYPELV 85
            Q E  ++   N S   +QKI ++ +K+G   ++  +P  P   +V    M+  + +L 
Sbjct: 1745 QLEEINSADVNNSKKLLQKIQDVAKKEGDDIIKKLLPKYPCNEDVICKAMKYSFADLA 1802



>EAY07843.1 on XP_820307   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 964

 Score = 21.9 bits (45), Expect = 8.7,   Method: Composition-based stats.
 Identities = 11/23 (47%), Positives = 11/23 (47%), Gaps = 4/23 (17%)

Query: 4   TFELQIPKSKKWD----DPNPSD 22
           TFEL   K KKW       NP D
Sbjct: 630 TFELSYDKEKKWQVLCGSGNPED 652




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07844.1 hypothetical protein TVAG_312430 [Trichomonas
vaginalis G3]
         (96 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351561  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   0.46 
XP_001348946  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   0.46 
XP_001349032  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   4.8  
XP_001350415  PfEMP1  (Establishment)  [Plasmodium falciparum]         22   8.8  

>EAY07844.1 on XP_001351561  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3553

 Score = 25.8 bits (55), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 9/19 (47%), Positives = 14/19 (73%)

Query: 20  SGNYYRIRRAIIRLEQKDL 38
           +GNYY++R A   L +KD+
Sbjct: 246 TGNYYKLREAWWALNRKDV 264



>EAY07844.1 on XP_001348946  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3553

 Score = 25.8 bits (55), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 9/19 (47%), Positives = 14/19 (73%)

Query: 20  SGNYYRIRRAIIRLEQKDL 38
           +GNYY++R A   L +KD+
Sbjct: 246 TGNYYKLREAWWALNRKDV 264



>EAY07844.1 on XP_001349032  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2267

 Score = 22.7 bits (47), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 4/37 (10%)

Query: 6    SDSDDPY----LINAGLPSGNYYRIRRAIIRLEQKDL 38
            SD   PY    LIN  L SGN+  I   I++ ++ +L
Sbjct: 2019 SDKTSPYSGIDLINDSLNSGNHIDIYDEILKRKENEL 2055



>EAY07844.1 on XP_001350415  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3056

 Score = 21.9 bits (45), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 9/31 (29%), Positives = 16/31 (51%)

Query: 17   GLPSGNYYRIRRAIIRLEQKDLDLQTKIHDY 47
            GLP G  + ++R+ I  +   L     I++Y
Sbjct: 1333 GLPKGFCHAVQRSFIDYKNMILGTSVNIYEY 1363




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07846.1 SRP54-type protein, putative [Trichomonas
vaginalis G3]
         (533 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07848.1 hypothetical protein TVAG_312470 [Trichomonas
vaginalis G3]
         (124 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAC24767   Hsp90  (Heat shock protein)  [Cryptosporidium parvum]       25   1.8  
XP_807448   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   2.9  
XP_803096   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   3.6  
XP_818480   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   7.6  
XP_821397   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   9.9  

>EAY07848.1 on AAC24767   Hsp90  (Heat shock protein)  [Cryptosporidium parvum]
          Length = 255

 Score = 24.6 bits (52), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 5/46 (10%)

Query: 40  FKRKSETEEEPDVIIGTPPINFSNKKKDYFPNELTLNSQKPIEKKR 85
           ++ ++E     D+II     N    +KD F  EL  NS   +EK R
Sbjct: 89  YEFQTEVSRLMDIII-----NSLYSQKDVFLRELLSNSADALEKAR 129



>EAY07848.1 on XP_807448   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 831

 Score = 24.3 bits (51), Expect = 2.9,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 15/24 (62%)

Query: 43 KSETEEEPDVIIGTPPINFSNKKK 66
          + +T    D+  GTPPI+F N K+
Sbjct: 66 EGKTRNTIDLFEGTPPISFGNWKE 89



>EAY07848.1 on XP_803096   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 753

 Score = 23.9 bits (50), Expect = 3.6,   Method: Composition-based stats.
 Identities = 10/26 (38%), Positives = 15/26 (57%)

Query: 72  ELTLNSQKPIEKKRISFASPPLAESP 97
           EL L S++P+E  R  F +  +  SP
Sbjct: 644 ELPLQSERPLEYLRFCFGACGIKNSP 669



>EAY07848.1 on XP_818480   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 926

 Score = 23.1 bits (48), Expect = 7.6,   Method: Composition-based stats.
 Identities = 9/27 (33%), Positives = 13/27 (48%)

Query: 79  KPIEKKRISFASPPLAESPPIAERNKQ 105
           +P+    I   +P  A SPP+   N Q
Sbjct: 709 RPLSTAEIGALNPNKASSPPVVPENAQ 735



>EAY07848.1 on XP_821397   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 932

 Score = 22.7 bits (47), Expect = 9.9,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 3/49 (6%)

Query: 79  KPIEKKRISFASPPLAESPPIAERNKQPRQVHFLAQ---PIGPGKKSEN 124
           +P+    I   +P  A  PP+   N Q  Q  F      P GP   +EN
Sbjct: 714 RPLSIAEIGALNPNKALIPPVVSDNAQGTQSQFSPAGQPPSGPKLLNEN 762




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07852.1 hypothetical protein TVAG_312510 [Trichomonas
vaginalis G3]
         (147 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_821137   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   2.2  
XP_812607   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   3.8  
XP_821526   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   3.9  

>EAY07852.1 on XP_821137   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 956

 Score = 25.0 bits (53), Expect = 2.2,   Method: Composition-based stats.
 Identities = 8/14 (57%), Positives = 11/14 (78%)

Query: 41  WEYDKNHKTLSRAV 54
           W Y+K HK+L+R V
Sbjct: 240 WNYNKQHKSLARLV 253



>EAY07852.1 on XP_812607   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 957

 Score = 24.3 bits (51), Expect = 3.8,   Method: Composition-based stats.
 Identities = 8/14 (57%), Positives = 11/14 (78%)

Query: 41  WEYDKNHKTLSRAV 54
           W Y+K HK+L+R V
Sbjct: 237 WNYNKQHKSLARLV 250



>EAY07852.1 on XP_821526   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 983

 Score = 24.3 bits (51), Expect = 3.9,   Method: Composition-based stats.
 Identities = 10/27 (37%), Positives = 17/27 (62%)

Query: 87  AVLEDEIENRIDELLKDIELLHKYGSE 113
           A++ D  + RID LL+   ++ +YG E
Sbjct: 146 AIVFDHYDVRIDRLLRPTAIVKEYGYE 172




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07857.1 hypothetical protein TVAG_142110, partial
[Trichomonas vaginalis G3]
         (95 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_815905   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   1.5  
XP_808394   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   1.9  
XP_819012   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   2.3  
XP_818403   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   2.9  
XP_818477   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   2.9  
XP_820670   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   3.2  
XP_822026   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   3.2  
XP_815706   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   4.2  
XP_815707   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   4.2  
XP_808957   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   4.3  
XP_803984   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   4.6  
XP_816643   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   5.9  
XP_807541   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   6.4  
XP_806519   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   8.2  

>EAY07857.1 on XP_815905   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 888

 Score = 24.3 bits (51), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%)

Query: 40  SQLEYKVDSYANEICDLRSRLNRVGHESDSWHE 72
           S +E+K        CD R R+  +G + +SW E
Sbjct: 306 SVVEWKEKLMMMTACDGRRRVYEIGDKGNSWTE 338



>EAY07857.1 on XP_808394   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 912

 Score = 23.9 bits (50), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/31 (38%), Positives = 18/31 (58%)

Query: 35  KELYISQLEYKVDSYANEICDLRSRLNRVGH 65
           K + ++QLEY  DS  +EI    +  NR+ H
Sbjct: 367 KVILLTQLEYSRDSQRSEIHLWLTDTNRIYH 397



>EAY07857.1 on XP_819012   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 918

 Score = 23.9 bits (50), Expect = 2.3,   Method: Composition-based stats.
 Identities = 9/19 (47%), Positives = 11/19 (57%)

Query: 54  CDLRSRLNRVGHESDSWHE 72
           CD R R+   G + DSW E
Sbjct: 314 CDGRRRVYESGDKGDSWTE 332



>EAY07857.1 on XP_818403   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 957

 Score = 23.5 bits (49), Expect = 2.9,   Method: Composition-based stats.
 Identities = 9/19 (47%), Positives = 11/19 (57%)

Query: 54  CDLRSRLNRVGHESDSWHE 72
           CD R R+   G + DSW E
Sbjct: 338 CDGRRRVYESGDKGDSWTE 356



>EAY07857.1 on XP_818477   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 869

 Score = 23.5 bits (49), Expect = 2.9,   Method: Composition-based stats.
 Identities = 8/19 (42%), Positives = 12/19 (63%)

Query: 54  CDLRSRLNRVGHESDSWHE 72
           CD R R+  +G + +SW E
Sbjct: 319 CDGRRRVYEIGDKGNSWTE 337



>EAY07857.1 on XP_820670   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 883

 Score = 23.5 bits (49), Expect = 3.2,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 28/46 (60%), Gaps = 1/46 (2%)

Query: 6   KYLKQLEESNVALEELKLKLAEKVEEAKGKELYISQLEYKVDSYAN 51
           KY + LEE ++++E+ K+ ++      KG ++Y+   ++  ++ AN
Sbjct: 150 KYTQVLEE-DISMEKKKVDVSRPTTVVKGNDIYMLVGKHSHEAAAN 194



>EAY07857.1 on XP_822026   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 888

 Score = 23.5 bits (49), Expect = 3.2,   Method: Composition-based stats.
 Identities = 9/19 (47%), Positives = 11/19 (57%)

Query: 54  CDLRSRLNRVGHESDSWHE 72
           CD R R+   G E +SW E
Sbjct: 315 CDGRRRVYESGDEGESWTE 333



>EAY07857.1 on XP_815706   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 907

 Score = 23.1 bits (48), Expect = 4.2,   Method: Composition-based stats.
 Identities = 8/16 (50%), Positives = 10/16 (62%)

Query: 55  DLRSRLNRVGHESDSW 70
           DL S L R+ H  D+W
Sbjct: 437 DLTSELQRIRHALDTW 452



>EAY07857.1 on XP_815707   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 907

 Score = 23.1 bits (48), Expect = 4.2,   Method: Composition-based stats.
 Identities = 8/16 (50%), Positives = 10/16 (62%)

Query: 55  DLRSRLNRVGHESDSW 70
           DL S L R+ H  D+W
Sbjct: 437 DLTSELQRIRHALDTW 452



>EAY07857.1 on XP_808957   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1446

 Score = 23.1 bits (48), Expect = 4.3,   Method: Composition-based stats.
 Identities = 8/16 (50%), Positives = 10/16 (62%)

Query: 55  DLRSRLNRVGHESDSW 70
           DL S L R+ H  D+W
Sbjct: 437 DLTSELQRIRHALDTW 452



>EAY07857.1 on XP_803984   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 794

 Score = 22.7 bits (47), Expect = 4.6,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 4/48 (8%)

Query: 36  ELYISQLEYKVDSYANEICDLRSRLNRVGHESDSWHERFLKADTSYHE 83
           ELY+SQ++   +S A  +  L   L  +     +W    ++ D+S+ E
Sbjct: 441 ELYLSQVKGDHESTAVSLAHLTEELKTIKSTLSTW----VQLDSSFSE 484



>EAY07857.1 on XP_816643   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 904

 Score = 22.7 bits (47), Expect = 5.9,   Method: Composition-based stats.
 Identities = 11/31 (35%), Positives = 18/31 (58%)

Query: 35  KELYISQLEYKVDSYANEICDLRSRLNRVGH 65
           K + ++QLEY  D+  +EI    +  NR+ H
Sbjct: 368 KVILLTQLEYSGDNQKSEIHLWLTDTNRIYH 398



>EAY07857.1 on XP_807541   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 920

 Score = 22.3 bits (46), Expect = 6.4,   Method: Composition-based stats.
 Identities = 11/31 (35%), Positives = 18/31 (58%)

Query: 35  KELYISQLEYKVDSYANEICDLRSRLNRVGH 65
           K + ++QLEY  D+  +EI    +  NR+ H
Sbjct: 368 KVILLTQLEYSGDNRKSEIHLWLTDTNRIYH 398



>EAY07857.1 on XP_806519   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 912

 Score = 22.3 bits (46), Expect = 8.2,   Method: Composition-based stats.
 Identities = 11/31 (35%), Positives = 18/31 (58%)

Query: 35  KELYISQLEYKVDSYANEICDLRSRLNRVGH 65
           K + ++QLEY  +S  +EI    +  NR+ H
Sbjct: 367 KVILLTQLEYSRESQRSEIHLWLTDTNRIYH 397




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07862.1 hypothetical protein TVAG_142160 [Trichomonas
vaginalis G3]
         (70 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07865.1 hypothetical protein TVAG_142190 [Trichomonas
vaginalis G3]
         (353 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAL38218  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   25   6.0  
AAL38222  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   25   6.1  
AAL38219  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   25   6.2  
AAL38221  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   25   6.2  
AAL38220  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   25   6.3  

>EAY07865.1 on AAL38218  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2977

 Score = 25.4 bits (54), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)

Query: 137  NWGYVKNMDELFNLSKKIYPQYEWIQISPNFVFNVSETMKLFARTKIFVSATGSCSF 193
            N+ Y KN  + F++ K I    EW+ I  N++  +++  +     KI V    S S+
Sbjct: 1080 NYFYFKNKKDNFDIQKTINKMNEWLAI-KNYINEINKNYQTLYEKKINVLLHNSKSY 1135



>EAY07865.1 on AAL38222  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2976

 Score = 25.4 bits (54), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)

Query: 137  NWGYVKNMDELFNLSKKIYPQYEWIQISPNFVFNVSETMKLFARTKIFVSATGSCSF 193
            N+ Y KN  + F++ K I    EW+ I  N++  +++  +     KI V    S S+
Sbjct: 1089 NYFYFKNKKDNFDIQKTINKMNEWLAI-KNYINEINKNYQTLYEKKINVLLHNSKSY 1144



>EAY07865.1 on AAL38219  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2969

 Score = 25.4 bits (54), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)

Query: 137  NWGYVKNMDELFNLSKKIYPQYEWIQISPNFVFNVSETMKLFARTKIFVSATGSCSF 193
            N+ Y KN  + F++ K I    EW+ I  N++  +++  +     KI V    S S+
Sbjct: 1084 NYFYFKNKKDNFDIQKTINKMNEWLAI-KNYINEINKNYQTLYEKKINVLLHNSKSY 1139



>EAY07865.1 on AAL38221  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2965

 Score = 25.4 bits (54), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)

Query: 137  NWGYVKNMDELFNLSKKIYPQYEWIQISPNFVFNVSETMKLFARTKIFVSATGSCSF 193
            N+ Y KN  + F++ K I    EW+ I  N++  +++  +     KI V    S S+
Sbjct: 1082 NYFYFKNKKDNFDIQKTINKMNEWLAI-KNYINEINKNYQTLYEKKINVLLHNSKSY 1137



>EAY07865.1 on AAL38220  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2957

 Score = 25.4 bits (54), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)

Query: 137  NWGYVKNMDELFNLSKKIYPQYEWIQISPNFVFNVSETMKLFARTKIFVSATGSCSF 193
            N+ Y KN  + F++ K I    EW+ I  N++  +++  +     KI V    S S+
Sbjct: 1076 NYFYFKNKKDNFDIQKTINKMNEWLAI-KNYINEINKNYQTLYEKKINVLLHNSKSY 1131




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07868.1 hypothetical protein TVAG_142220 [Trichomonas
vaginalis G3]
         (236 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001610497  variant erythrocyte surface antigen-1, alpha subun...    30   0.12 
ACB87908  Rh5  (Adhesin)  [Plasmodium falciparum]                      28   0.32 
XP_802286   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.52 
XP_001608668  variant erythrocyte surface antigen-1, alpha subun...    26   2.0  
XP_808565   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   3.7  
XP_804542   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   4.0  
XP_001351319  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   4.9  
XP_001349438  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   5.5  
XP_001611365  variant erythrocyte surface antigen-1, alpha subun...    25   5.9  
XP_001610714  variant erythrocyte surface antigen-1, alpha subun...    25   7.2  
XP_001350798  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   8.4  

>EAY07868.1 on XP_001610497  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1315

 Score = 30.0 bits (66), Expect = 0.12,   Method: Composition-based stats.
 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 98  KKKNHEKIKSNFEKSKSVTDKAEQRLTAARAK-GSGSPDLRKAEEAFETAT 147
           KK+  E +K+   K+K   DKA+Q L     K G  S  + KA++A E  T
Sbjct: 691 KKEAIEGVKTVLGKAKGELDKAKQELEQVNGKDGQTSQAISKAKKALEALT 741



>EAY07868.1 on ACB87908  Rh5  (Adhesin)  [Plasmodium falciparum]
          Length = 526

 Score = 28.5 bits (62), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 32/156 (20%)

Query: 59  KINEKYGLVK-QCNESDFSAQNKLYDDISKLKPTYDDIVAKKKNHEKIKSNFEKSKSVTD 117
           KINE Y  VK +CN+     +N L   I KL+  YD      KN +  +  ++ S+ + D
Sbjct: 212 KINETYDKVKSKCND----IKNDLIATIKKLEHPYD---INNKNDDSYR--YDISEEIDD 262

Query: 118 KAEQRLTAARAKGSGSPD-------------------LRKAEEAFETATRQKQIDTANYE 158
           K+E+             D                    +K  + + T  ++      N+E
Sbjct: 263 KSEETDDETEEVEDSIQDTDSNHTPSNKKKNDLMNRTFKKMMDEYNTKKKKLIKCIKNHE 322

Query: 159 ESESKIVIEVKEYKIRLFQQLLQSISNFASNCSQNS 194
              +KI +++K Y   LF+QL    +NF   C+ N 
Sbjct: 323 NDFNKICMDMKNYGTNLFEQLSCYNNNF---CNTNG 355



>EAY07868.1 on XP_802286   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 461

 Score = 27.7 bits (60), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 13  WREASANLEEAIKNNKKKQEYFIRS 37
           W EA   L     NN+K+ E+ +RS
Sbjct: 101 WTEALGTLSRVWGNNQKRHEWGVRS 125



>EAY07868.1 on XP_001608668  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1337

 Score = 26.2 bits (56), Expect = 2.0,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 27/64 (42%)

Query: 104 KIKSNFEKSKSVTDKAEQRLTAARAKGSGSPDLRKAEEAFETATRQKQIDTANYEESESK 163
           K+K   E +K      E+     +A GS    L  A+EA E     K I+    +  E+K
Sbjct: 669 KVKVGLEGNKDEEADGEELFDVLKAIGSVVVQLGNAQEALEGKAESKVIEGVKQKLGEAK 728

Query: 164 IVIE 167
             +E
Sbjct: 729 KELE 732



>EAY07868.1 on XP_808565   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 770

 Score = 25.4 bits (54), Expect = 3.7,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 13  WREASANLEEAIKNNKKKQEYFIRS 37
           W EA   L     NN+K+ E+ +RS
Sbjct: 350 WTEALGTLSRVWGNNQKRHEWGVRS 374



>EAY07868.1 on XP_804542   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 813

 Score = 25.4 bits (54), Expect = 4.0,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 13  WREASANLEEAIKNNKKKQEYFIRS 37
           W EA   L     NN+K+ E+ +RS
Sbjct: 352 WTEALGTLSRVWGNNQKRHEWGVRS 376



>EAY07868.1 on XP_001351319  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2646

 Score = 25.0 bits (53), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 148 RQKQIDTANYEESESKIVIEVKEYKIRLFQQLLQSISNFASNCSQNS 194
           +++   T NYEE E K   E+K  K ++    L+ + N    C++N+
Sbjct: 437 KKRDATTTNYEEYEKKFYKELKGTKYKVVNNFLEKL-NDEDVCTKNN 482



>EAY07868.1 on XP_001349438  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2265

 Score = 25.0 bits (53), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 12/47 (25%), Positives = 26/47 (55%), Gaps = 2/47 (4%)

Query: 34  FIRSTEDCFTEFVRKQPEQINDILFKIN--EKYGLVKQCNESDFSAQ 78
           ++R  E+   +F RK+  ++ND + K    +KYG  + C+ + +  +
Sbjct: 320 YLRWFEEWAEDFCRKKKHKLNDAIQKCRGEDKYGKDRYCDLNGYDCE 366



>EAY07868.1 on XP_001611365  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1335

 Score = 24.6 bits (52), Expect = 5.9,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 35/75 (46%), Gaps = 5/75 (6%)

Query: 130 GSGSPDLRKAEEAFETATRQKQIDTANYEESES-----KIVIEVKEYKIRLFQQLLQSIS 184
           G  S  L+  E   +TAT  K++D    E S++     +++ E+++    + + +   I 
Sbjct: 757 GGSSGILKDLEGKLDTATGGKEVDPGKNEVSKAIHKVWEVLKEMEKQLKEVLKNIKDEIE 816

Query: 185 NFASNCSQNSSTLTQ 199
            + S+   N+  + Q
Sbjct: 817 QYESDMDDNTGRIIQ 831



>EAY07868.1 on XP_001610714  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1231

 Score = 24.6 bits (52), Expect = 7.2,   Method: Composition-based stats.
 Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 6/83 (7%)

Query: 99  KKNHEKIKSNFEKSKSVTDKAEQRLTAARAKGSGSPDLRKAEEAFETATRQKQIDTANYE 158
           K+  EK K   + +K   +KA++ L      G G   L+   +A   A    Q D  N +
Sbjct: 633 KRELEKAKGALDTAKGKLEKAKKALEKLTTNGGGGGILKNVVDAIGKA----QSDVTNVD 688

Query: 159 ESESKIVIEVKEYKIRLFQQLLQ 181
             ++ I   V  +KIR   ++L+
Sbjct: 689 PGKNAISEGV--HKIREVLKILK 709



>EAY07868.1 on XP_001350798  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2359

 Score = 24.3 bits (51), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 13/37 (35%), Positives = 19/37 (51%)

Query: 74  DFSAQNKLYDDISKLKPTYDDIVAKKKNHEKIKSNFE 110
           D   + KLY+  S  KPT   I+   +NH+ I+   E
Sbjct: 539 DKCKRGKLYEPTSSAKPTEIKILKSGENHDDIEKKLE 575




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07869.1 hypothetical protein TVAG_142230 [Trichomonas
vaginalis G3]
         (187 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001610567  variant erythrocyte surface antigen-1, alpha subun...    28   0.49 

>EAY07869.1 on XP_001610567  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1315

 Score = 27.7 bits (60), Expect = 0.49,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 4/42 (9%)

Query: 50  KCNYLNNEFTGNYYSIINCYDHSTTFLSCSFIGNKGNYLFYP 91
           KC+ +  E  G Y S    Y H TT +  S++ ++  Y+F+P
Sbjct: 228 KCSCVKEEEKG-YRS---AYPHKTTLVKSSYVEDRTAYIFHP 265




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07870.1 hypothetical protein TVAG_142240 [Trichomonas
vaginalis G3]
         (711 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ABQ59247  RCC1  (Establishment)  [Toxoplasma gondii]                   26   7.5  

>EAY07870.1 on ABQ59247  RCC1  (Establishment)  [Toxoplasma gondii]
          Length = 255

 Score = 25.8 bits (55), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 11/19 (57%), Positives = 13/19 (68%)

Query: 138 PDNLTPVPAILQLSIQQNF 156
           PD  TP PA LQ+S+ Q F
Sbjct: 190 PDLATPAPAALQVSVFQAF 208




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07872.1 hypothetical protein TVAG_142260 [Trichomonas
vaginalis G3]
         (82 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CAA05261  PfSUB1  (Proteases)  [Plasmodium falciparum]                 26   0.25 
XP_827743  VSG  (Establishment)  [Trypanosoma brucei]                  25   0.66 
AAF14193  SBP3  (Others)  [Babesia bovis]                              24   1.5  
XP_001351438  PfEMP1  (Establishment)  [Plasmodium falciparum]         22   6.6  
XP_001351439  PfEMP1  (Establishment)  [Plasmodium falciparum]         22   7.0  

>EAY07872.1 on CAA05261  PfSUB1  (Proteases)  [Plasmodium falciparum]
          Length = 689

 Score = 26.2 bits (56), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 16/58 (27%), Positives = 30/58 (51%)

Query: 18  EYRHVTLPKEISRKDPKDHLLSEEEWRALGIQMSPGWIHYHRHNPEPNILLFRREHHG 75
           E+R++    ++SR D    L++E +  +  I +    I Y+  + + NI L  +E HG
Sbjct: 339 EFRNLQWGLDLSRLDETQELINEHQVMSTRICVIDSGIDYNHPDLKDNIELNLKELHG 396



>EAY07872.1 on XP_827743  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 503

 Score = 24.6 bits (52), Expect = 0.66,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 29/72 (40%), Gaps = 13/72 (18%)

Query: 1   MSVDEIIYSEKYYDDVYEYRHVTLPKEISRKDPKDHLLSEEEW--------RALGIQMSP 52
           MSV +  + ++Y D   ++   T   ++   DPK H   +E W        R    + + 
Sbjct: 67  MSVADEKWQKQYGDGTEKFAWSTFESKLGDTDPKKHW--KENWQNWLDTKKRLEAAKKTD 124

Query: 53  GWIHYHRHNPEP 64
            W H H   P P
Sbjct: 125 EWKHTH---PAP 133



>EAY07872.1 on AAF14193  SBP3  (Others)  [Babesia bovis]
          Length = 1089

 Score = 23.9 bits (50), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 1/29 (3%)

Query: 50  MSPGWIHYHRHNP-EPNILLFRREHHGNV 77
           M+   ++ + HN   PN++ FR  H+G V
Sbjct: 784 MTRTAVNVNSHNTGNPNLIRFRSRHYGKV 812



>EAY07872.1 on XP_001351438  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2312

 Score = 21.9 bits (45), Expect = 6.6,   Method: Composition-based stats.
 Identities = 8/12 (66%), Positives = 9/12 (75%)

Query: 8    YSEKYYDDVYEY 19
            Y+E YY D YEY
Sbjct: 2214 YNEPYYYDFYEY 2225



>EAY07872.1 on XP_001351439  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2326

 Score = 21.9 bits (45), Expect = 7.0,   Method: Composition-based stats.
 Identities = 8/12 (66%), Positives = 9/12 (75%)

Query: 8    YSEKYYDDVYEY 19
            Y+E YY D YEY
Sbjct: 2228 YNEPYYYDFYEY 2239




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07873.1 hypothetical protein TVAG_142270 [Trichomonas
vaginalis G3]
         (133 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_812615   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   1.5  
P02892  BabR  (Others)  [Babesia bovis]                                24   3.2  
P02891  BabR  (Others)  [Babesia bovis]                                24   3.4  
P02890  BabR  (Others)  [Babesia bovis]                                24   3.5  

>EAY07873.1 on XP_812615   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1116

 Score = 25.4 bits (54), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 7/83 (8%)

Query: 38  INQNELQQKINECNSLKEQNMRLSDSANYYNFQLNLTKQALEKIR------IENENLTNN 91
           I+++ +  +I E NSL E N +LS+        LN  K+++++        +++E LT  
Sbjct: 850 ISESAIAAEIAE-NSLPENNAQLSEGKTVQQAALNEAKESMQRDSDVQPQDLQSEKLTVF 908

Query: 92  LNRIQQQLREKTEENQKILSTNE 114
            +  +      TEE ++   TN+
Sbjct: 909 SDVEKSSESNDTEEPEEDGGTND 931



>EAY07873.1 on P02892  BabR  (Others)  [Babesia bovis]
          Length = 212

 Score = 23.9 bits (50), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 10/22 (45%), Positives = 14/22 (63%)

Query: 103 TEENQKILSTNETLKVAFKDLI 124
           TEE    LS +E LK  +K+L+
Sbjct: 70  TEEGDHSLSGDELLKFVYKELV 91



>EAY07873.1 on P02891  BabR  (Others)  [Babesia bovis]
          Length = 183

 Score = 23.9 bits (50), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 10/22 (45%), Positives = 14/22 (63%)

Query: 103 TEENQKILSTNETLKVAFKDLI 124
           TEE    LS +E LK  +K+L+
Sbjct: 70  TEEGDHSLSGDELLKFVYKELV 91



>EAY07873.1 on P02890  BabR  (Others)  [Babesia bovis]
          Length = 191

 Score = 23.9 bits (50), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 10/22 (45%), Positives = 14/22 (63%)

Query: 103 TEENQKILSTNETLKVAFKDLI 124
           TEE    LS +E LK  +K+L+
Sbjct: 70  TEEGDHSLSGDELLKFVYKELV 91




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07877.1 hypothetical protein TVAG_142310 [Trichomonas
vaginalis G3]
         (363 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001347297  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   2.9  
XP_626924  Hsp90  (Heat shock protein)  [Cryptosporidium parvum]       25   9.7  

>EAY07877.1 on XP_001347297  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 144

 Score = 25.8 bits (55), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 231 AAKLKNISLINSKTLVCTENNSLISYNFGQLIPLATVSFSNSNFEFI 277
            + L +I  IN KT      N++ S+N    IPL  +  +N ++ +I
Sbjct: 32  ESTLDDIHKINDKTYNMISRNNIYSHNDNDKIPLDNLGSTNISYNYI 78



>EAY07877.1 on XP_626924  Hsp90  (Heat shock protein)  [Cryptosporidium parvum]
          Length = 255

 Score = 24.6 bits (52), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)

Query: 112 DISHVIPFDVDNY-ILIKKDCSTQMLKSNGDIQNLWELSS 150
           D+S +  F V  Y   +  D  T + K NGD Q +WE S+
Sbjct: 124 DVSMIGQFGVGFYSAYLVADKVTVITKHNGDEQYIWESSA 163




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07893.1 hypothetical protein TVAG_142470 [Trichomonas
vaginalis G3]
         (238 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001349740  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   1.1  
XP_951521  VSG  (Establishment)  [Trypanosoma brucei]                  26   2.9  
AAY44833  MSA-1  (Invasion)  [Babesia bovis]                           25   3.0  
XP_820393   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   3.9  

>EAY07893.1 on XP_001349740  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3346

 Score = 26.9 bits (58), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 6/57 (10%)

Query: 177 KAHETYIKAVDDLNLRKNDIFSQTFKDSSALIGKV----VTQISKNYHDDFPSSPVD 229
           KA  T    VD  N  + DIF  TF++    +GK     + +I K Y +D   +P D
Sbjct: 774 KAQMTKNSVVDGDNKLEGDIFKVTFRNGG--VGKNLNGDICKIDKTYSNDSRGTPTD 828



>EAY07893.1 on XP_951521  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 444

 Score = 25.8 bits (55), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 13/38 (34%), Positives = 24/38 (63%)

Query: 85  DDLHEMSEQLKNVAGDVENITKEISTQIPQQVIKPLED 122
           D L E+ ++LK++  +VE+I     +Q+P+  I  L+D
Sbjct: 342 DKLREIEKKLKDILRNVESIKTSKLSQMPRSGISQLKD 379



>EAY07893.1 on AAY44833  MSA-1  (Invasion)  [Babesia bovis]
          Length = 273

 Score = 25.4 bits (54), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 36/95 (37%), Gaps = 32/95 (33%)

Query: 62  LKNLADSQKETANSYSEAFENSEDDLHEMSEQLKNVAGDVENITKEISTQIPQQVIKPLE 121
           +KN+A+  KE     SE F  S       +EQ K+V GD E++   +             
Sbjct: 89  MKNVAELLKEDKQFSSEGFITS-------TEQAKSVEGDFESLMYSV------------- 128

Query: 122 DLLQEIQRIHQLSAERRKCFILNKNAQNKFVKAQE 156
                IQ  H       KC  LNK     F  A+E
Sbjct: 129 -----IQIYH-------KCVALNKEVNRLFPNAKE 151



>EAY07893.1 on XP_820393   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 836

 Score = 25.4 bits (54), Expect = 3.9,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 55 LTCFTASLKNLADSQKETANSYSEAFENSEDDLH 88
          L CF + L  L   +K +AN Y E   + +D  H
Sbjct: 19 LACFYSFLFTLLRRKKTSANRYCEIRRHQKDQQH 52




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07900.1 surface antigen BspA-like [Trichomonas
vaginalis G3]
         (797 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07902.1 rubrerythrin, putative [Trichomonas vaginalis
G3]
         (191 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_803305   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.40 
XP_966160  PfEMP1  (Establishment)  [Plasmodium falciparum]            26   1.3  
XP_001609100  variant erythrocyte surface antigen-1, beta subuni...    25   5.0  

>EAY07902.1 on XP_803305   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 259

 Score = 27.7 bits (60), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 129 KEHEIRFNTLAKQVESSTVFKREAVVAWKCRNCGYVVRAKVAPKACPVC 177
           +E +++   ++++V +S+V     VV W C   G    A+  P++CP C
Sbjct: 30  RESKLQRPNMSRRVFNSSVLLL-VVVMWMCCGTGGDAAAEELPQSCPGC 77



>EAY07902.1 on XP_966160  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2394

 Score = 26.2 bits (56), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)

Query: 138  LAKQVESSTVFKREAVVAWKCRN-CGYVV 165
            L    E++ +F+      WKCRN CGY+V
Sbjct: 1722 LKSSCENAHIFEGIKENKWKCRNVCGYIV 1750



>EAY07902.1 on XP_001609100  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 1093

 Score = 24.6 bits (52), Expect = 5.0,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 18/36 (50%)

Query: 128 EKEHEIRFNTLAKQVESSTVFKREAVVAWKCRNCGY 163
           +KE E     L  + +SST  KR+ +  +    CGY
Sbjct: 440 KKEQEKGEMQLHGESQSSTTLKRDCITHYLMAACGY 475




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07903.1 hypothetical protein TVAG_064500 [Trichomonas
vaginalis G3]
         (323 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_813679   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.66 
XP_812068   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   6.7  

>EAY07903.1 on XP_813679   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 823

 Score = 28.5 bits (62), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 4/54 (7%)

Query: 80  ILILSNLPVEHRRQFTMIFTGAVAYKNNGESPLVKYIEQDPDIIDTIIHLYNNP 133
           + +    P+E    F   F GA    ++GE P  + I + P +  T + LYN P
Sbjct: 663 VPLTGETPLE---PFGFCF-GACGEDDDGEEPSPEEIGKKPRVTVTNVFLYNRP 712



>EAY07903.1 on XP_812068   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 812

 Score = 25.0 bits (53), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 10/25 (40%), Positives = 15/25 (60%)

Query: 109 ESPLVKYIEQDPDIIDTIIHLYNNP 133
           E P+ K I ++P +  T + LYN P
Sbjct: 681 EKPITKEIGKEPRLTVTNVFLYNRP 705




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07911.1 B9 protein [Trichomonas vaginalis G3]
         (178 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_810676   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   9.4  

>EAY07911.1 on XP_810676   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1040

 Score = 23.5 bits (49), Expect = 9.4,   Method: Composition-based stats.
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 5/35 (14%)

Query: 85  EHDSLGRSYLGGYGFANLPTSPGNHDITVD-LWRP 118
           E DS   + +GGYG +  P +    ++T D  WRP
Sbjct: 168 ERDSETNALVGGYGTSTTPLT----EVTGDGYWRP 198




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07914.1 hypothetical protein TVAG_064610 [Trichomonas
vaginalis G3]
         (608 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001608668  variant erythrocyte surface antigen-1, alpha subun...    27   3.3  
XP_001610714  variant erythrocyte surface antigen-1, alpha subun...    26   7.4  

>EAY07914.1 on XP_001608668  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1337

 Score = 27.3 bits (59), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 14/101 (13%)

Query: 478 KTKIVKLELNIDSLENSITERLDEARDQYS--KEIFDLQNKLKRLQLQFEKQNSTINNQK 535
           K ++ K++ ++  L N +   L+  +D+ +  +E+FD+   +  + +Q       + N +
Sbjct: 653 KCRVDKVKEDLVGLVNKVKVGLEGNKDEEADGEELFDVLKAIGSVVVQ-------LGNAQ 705

Query: 536 VTVEGLNEQ--IERQKRNLIEVNESKDKLEKQKSAIEKELN 574
             +EG  E   IE  K+ L    E+K +LEK K A+E E+ 
Sbjct: 706 EALEGKAESKVIEGVKQKL---GEAKKELEKAKEAVESEVG 743



>EAY07914.1 on XP_001610714  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1231

 Score = 26.2 bits (56), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 3/50 (6%)

Query: 532 NNQKVTVEGLNEQIERQKRNLIEVNESKDKLEKQKSAIEKELNDLKKSNI 581
             +K  ++G+  ++E+ K  L   + +K KLEK K A+EK   +     I
Sbjct: 623 GKEKKAIQGVKRELEKAKGAL---DTAKGKLEKAKKALEKLTTNGGGGGI 669




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07915.1 hypothetical protein TVAG_064620 [Trichomonas
vaginalis G3]
         (358 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_804836   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   1.1  
XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]                 27   2.2  
XP_652776  Rab11B  (Establishment)  [Entamoeba histolytica]            26   3.1  
AAL15425  MSA-2a1  (Invasion)  [Babesia bovis]                         26   3.6  
XP_807319   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   3.9  
XP_804105   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   8.6  

>EAY07915.1 on XP_804836   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 919

 Score = 27.7 bits (60), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 2/71 (2%)

Query: 246 LYVISQRNDGSYNIKAVGTGKGFELRKAL--PFPGLRDEELSTKSGIPGAIFVHKSGFLG 303
           +Y   + +DGSY++ AV  GK  E  K++   +  L    LS +SG    + + K G   
Sbjct: 390 VYENKKGDDGSYSLVAVSLGKQLERIKSMVKKWKDLDSALLSCRSGSSATVDLPKKGMCN 449

Query: 304 AYKELDQAVQF 314
                D  V F
Sbjct: 450 GPVPTDGLVGF 460



>EAY07915.1 on XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]
          Length = 2112

 Score = 26.9 bits (58), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 1/39 (2%)

Query: 321 QPTPEILP-PKKEKKPEEEKKTEEGAKPEEEKKEEEKKE 358
           +P PE  P P ++  PEE     E   PEE     EK E
Sbjct: 511 KPNPEENPNPVEKPTPEENPNPVEKPTPEENPNPVEKPE 549



>EAY07915.1 on XP_652776  Rab11B  (Establishment)  [Entamoeba histolytica]
          Length = 211

 Score = 25.8 bits (55), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 9/102 (8%)

Query: 179 IGKEFTDRLLFMLDSQVPAM--DVVK----RAYYDRFNVDESGKIMI--LSESCGFEKHL 230
           IG EF  R +   D  + A   D       RA  + +     G +++  +++   FE   
Sbjct: 43  IGVEFATRSINYCDKNIRAQIWDTAGQERYRAITNAYYRGALGALVVYDITKKTSFESVE 102

Query: 231 KRFEEEEENEDKPRVLYVISQRNDGSYNIKAVGTGKGFELRK 272
           K   E  EN DK  V  VI  + D S   + V T +G EL K
Sbjct: 103 KWLAELHENADKKVVQMVIGNKCDLS-QTREVQTSEGEELAK 143



>EAY07915.1 on AAL15425  MSA-2a1  (Invasion)  [Babesia bovis]
          Length = 311

 Score = 25.8 bits (55), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 2/46 (4%)

Query: 298 KSGFLGAYKELDQAVQFAKLALAQPTPEILPPKKEKKPEEEKKTEE 343
           KS F+  YK+L++  +  K   AQ +P    P   ++P E ++T+E
Sbjct: 180 KSPFMRIYKDLNEYDELVKKKPAQESPTA--PSSPQRPAETQQTQE 223



>EAY07915.1 on XP_807319   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1041

 Score = 26.2 bits (56), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 2/66 (3%)

Query: 251 QRNDGSYNIKAVGTGKGFE-LRKALPFPGLRDEEL-STKSGIPGAIFVHKSGFLGAYKEL 308
           ++NDG Y++ AV  GK  E ++K +      D  L S  SG    +   K G        
Sbjct: 435 KKNDGLYSLVAVSLGKQLERIKKVVKTWAALDSALQSCSSGSSATVDSPKKGMCNGRVPT 494

Query: 309 DQAVQF 314
           D+ V F
Sbjct: 495 DELVGF 500



>EAY07915.1 on XP_804105   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1017

 Score = 25.0 bits (53), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 2/71 (2%)

Query: 246 LYVISQRNDGSYNIKAVGTGKGFELRKAL--PFPGLRDEELSTKSGIPGAIFVHKSGFLG 303
           +Y   + +DGSY++ AV  GK  E  K++   +  L     S +SG  G + +   G   
Sbjct: 428 VYENKKGDDGSYSLVAVSLGKQLERIKSMVKKWKDLDSALHSCRSGSSGTVDLPTKGMCN 487

Query: 304 AYKELDQAVQF 314
                D  V F
Sbjct: 488 GPVPTDGLVGF 498




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07921.1 hypothetical protein TVAG_064690 [Trichomonas
vaginalis G3]
         (384 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001608670  variant erythrocyte surface antigen-1, alpha subun...    34   0.016
XP_001609450  variant erythrocyte surface antigen-1, alpha subun...    32   0.069
XP_001610713  variant erythrocyte surface antigen-1, alpha subun...    26   3.8  

>EAY07921.1 on XP_001608670  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1320

 Score = 33.9 bits (76), Expect = 0.016,   Method: Composition-based stats.
 Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 7/127 (5%)

Query: 207 LANRQSTQKGIDTR-ITSLSHELEGLGDKLERKLAESKVKMDKKLEINTKLMKE---GIK 262
           L N Q   +G D   I  +  +LE    KLE +L + K +++ KL+  TK + E   G  
Sbjct: 702 LGNAQEALEGKDKEGIKGVIKKLEEAKGKLETELTKVKDRLNGKLQEATKKLGELTKGSG 761

Query: 263 RQEAYNASAAIDAAKMQKQLSDDLFYFQDKVEEL--KRKEKKINNQKEFNFAEAEQLISK 320
            +E+ + ++   +  + K  SDD    ++++ E+  K +E     QKE   + +  L   
Sbjct: 762 GKESGSIASVTGSDGLDKAASDDFDQGKNRISEVIHKVREALKEIQKELGVSNSSYLNGS 821

Query: 321 LESEYNA 327
           L SE+ A
Sbjct: 822 L-SEWVA 827



>EAY07921.1 on XP_001609450  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1309

 Score = 32.0 bits (71), Expect = 0.069,   Method: Composition-based stats.
 Identities = 43/174 (24%), Positives = 75/174 (43%), Gaps = 33/174 (18%)

Query: 202 ASKSLLANRQSTQKGIDTRITSLSHELEGLGDKLERKLAESKVKM--------------- 246
           A ++L   +     G+   + S   +LEG+   L  KL E+K K+               
Sbjct: 659 AQEALEGKKPEAILGVKAALDSAKGKLEGVNSGLAGKLGEAKTKLGELTNGGGNGILGEL 718

Query: 247 --DKKLEINTKLMKEGIKRQE--AYNASAAIDAAKMQKQLSDDLFYFQDKVEELKRKEKK 302
             D+ LE  TK+ ++GI   +      S AI+  +   +L       ++ VE+ K +++K
Sbjct: 719 AGDRGLEKATKINRKGIVEYDPGKNKISEAINKVREVLKL------MKEGVEKQKTEDRK 772

Query: 303 -INNQKEFNFAEAEQLISKLESEYNAIISAAAAVPSLDAEHHINLINSVAHAVS 355
            I ++ +F   E    IS L    N I S    V S     +I L+N++ + +S
Sbjct: 773 DIVDETKFVVGE----ISGLSLTDNKIESVLKQVIS---HEYITLLNAINNLLS 819



>EAY07921.1 on XP_001610713  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1294

 Score = 26.2 bits (56), Expect = 3.8,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 25/50 (50%)

Query: 202 ASKSLLANRQSTQKGIDTRITSLSHELEGLGDKLERKLAESKVKMDKKLE 251
           A ++L   ++   +G+   +     ELEG  + L  KL E+K  +  KL+
Sbjct: 660 AQEALEGKKKEAIEGVKGALGEAKRELEGAKNGLNGKLEEAKDGLKDKLQ 709




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07926.1 hypothetical protein TVAG_064740 [Trichomonas
vaginalis G3]
         (220 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001347692  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   1.5  
XP_001351561  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   3.4  
XP_001348946  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   3.4  
XP_001609450  variant erythrocyte surface antigen-1, alpha subun...    25   3.5  
XP_001349740  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   5.6  
XP_001348176  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   6.7  

>EAY07926.1 on XP_001347692  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2994

 Score = 26.6 bits (57), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 15/45 (33%), Positives = 28/45 (62%), Gaps = 5/45 (11%)

Query: 161  IQNEACPGDPPCLAINK---LDLLGDVIAEGVSDKEEFVSFHDDD 202
            IQ+E  P D P + ++K   +++ G+V+ +G+++K    S HD D
Sbjct: 2712 IQSE--PLDVPKVGVSKELPMNIGGNVLDDGINEKPFITSIHDRD 2754



>EAY07926.1 on XP_001351561  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3553

 Score = 25.4 bits (54), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 4/46 (8%)

Query: 178  LDLLGDVIAEGVSDKEEFVSFHDDD----DDVSIIGHISKNGNIKI 219
            +++ G+V+ +G+ +K    S HD D    +++S   H+S N N  I
Sbjct: 3308 MNIGGNVLDDGMDEKPFITSIHDRDLNSGEEISYNIHMSTNTNNDI 3353



>EAY07926.1 on XP_001348946  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3553

 Score = 25.4 bits (54), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 4/46 (8%)

Query: 178  LDLLGDVIAEGVSDKEEFVSFHDDD----DDVSIIGHISKNGNIKI 219
            +++ G+V+ +G+ +K    S HD D    +++S   H+S N N  I
Sbjct: 3308 MNIGGNVLDDGMDEKPFITSIHDRDLNSGEEISYNIHMSTNTNNDI 3353



>EAY07926.1 on XP_001609450  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1309

 Score = 25.4 bits (54), Expect = 3.5,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 34/84 (40%), Gaps = 17/84 (20%)

Query: 85  KIKGYFVRSGCCYIGCCCEEYGY---------------CAKCCMYSWSLQISDDNKTWKE 129
           KI+  + RSG C +G    ++G                C  C    W++  +DDNK    
Sbjct: 124 KIETCWTRSGECKVGGKGNQHGTKPECTYLQDVKPDNKCDSCGCMKWNVPEADDNKNGHH 183

Query: 130 VHRVEKDYDMRRCREKTYNFDQEY 153
           + R  K  +   C  +  NF ++Y
Sbjct: 184 LGRRCKRGNGYTCGAE--NFGRDY 205



>EAY07926.1 on XP_001349740  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3346

 Score = 24.6 bits (52), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 8/25 (32%), Positives = 18/25 (72%)

Query: 178  LDLLGDVIAEGVSDKEEFVSFHDDD 202
            ++++G+V+ +G+++K    S HD D
Sbjct: 3101 MNIVGNVLDDGINEKPFITSIHDRD 3125



>EAY07926.1 on XP_001348176  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3119

 Score = 24.6 bits (52), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 24/92 (26%), Positives = 48/92 (52%), Gaps = 13/92 (14%)

Query: 136  DYDMRRCREKTYN-FDQEYECKYVRLIQNEACPGDPPCLAINK---LDLLGDVIAEGVSD 191
            D  M +  ++ +N   Q++  +Y   IQ+E  P D P   ++    ++++G+V+ +G+ +
Sbjct: 2832 DTPMNKFTDEEWNELKQDFVSQY---IQSE--PLDVPQYDVSTELPMNIVGNVLDDGMDE 2886

Query: 192  KEEFVSFHDDD----DDVSIIGHISKNGNIKI 219
            K    S HD +    D++S   ++S N N  I
Sbjct: 2887 KPFITSIHDRNLYSGDEISYNINMSTNTNNDI 2918




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07931.1 hypothetical protein TVAG_064790 [Trichomonas
vaginalis G3]
         (54 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_807140   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           21   5.4  

>EAY07931.1 on XP_807140   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 393

 Score = 21.2 bits (43), Expect = 5.4,   Method: Composition-based stats.
 Identities = 8/21 (38%), Positives = 14/21 (66%)

Query: 4   AKKLIDANDIDKTSYLLDNNI 24
           +KKL + ND++K+S   D  +
Sbjct: 179 SKKLTEFNDVEKSSESYDTQL 199




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07933.1 hypothetical protein TVAG_064810 [Trichomonas
vaginalis G3]
         (82 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_802262   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   1.7  
XP_819737   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   3.0  
XP_815193   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   4.0  
XP_818403   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   4.9  
CAB37326  PfSUB2  (Proteases)  [Plasmodium falciparum]                 22   6.8  

>EAY07933.1 on XP_802262   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 443

 Score = 23.5 bits (49), Expect = 1.7,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 5/51 (9%)

Query: 14  SYSAKFVRMIQDESCPGELPCIAINKLDLIGEIETGNDNEDENFVSYHDDD 64
           SY +KF R       P     + +N   L+  +   +DN+D + + Y  DD
Sbjct: 93  SYESKFERFF-----PSGGSGVLMNNGTLVFPVVAFDDNDDYSMIIYSTDD 138



>EAY07933.1 on XP_819737   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1112

 Score = 23.1 bits (48), Expect = 3.0,   Method: Composition-based stats.
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)

Query: 38  NKLDLIGEIETGNDNEDENFVSYHDDDDD 66
           NK  L  E+ TGN   D   V + +D+DD
Sbjct: 351 NKWWLSSEV-TGNGCRDPTLVKWREDEDD 378



>EAY07933.1 on XP_815193   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 702

 Score = 22.7 bits (47), Expect = 4.0,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 16/24 (66%)

Query: 38  NKLDLIGEIETGNDNEDENFVSYH 61
           NK+ L+G +E  N+NE+  + S H
Sbjct: 149 NKVFLLGGVELSNENENIIWDSLH 172



>EAY07933.1 on XP_818403   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 957

 Score = 22.3 bits (46), Expect = 4.9,   Method: Composition-based stats.
 Identities = 6/19 (31%), Positives = 15/19 (78%)

Query: 47  ETGNDNEDENFVSYHDDDD 65
           ++G++ E+E F++ ++ DD
Sbjct: 448 KSGDNKEEEKFIALYEKDD 466



>EAY07933.1 on CAB37326  PfSUB2  (Proteases)  [Plasmodium falciparum]
          Length = 1342

 Score = 21.9 bits (45), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 8/19 (42%), Positives = 15/19 (78%)

Query: 48  TGNDNEDENFVSYHDDDDD 66
           +GN+NE E+ + YH+ +D+
Sbjct: 489 SGNENETEDTLIYHNKNDN 507




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07937.1 surface antigen BspA-like [Trichomonas
vaginalis G3]
         (390 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07961.1 hypothetical protein TVAG_332860 [Trichomonas
vaginalis G3]
         (921 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001608665  variant erythrocyte surface antigen-1, alpha subun...    28   3.6  
XP_816853   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   7.3  

>EAY07961.1 on XP_001608665  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1326

 Score = 27.7 bits (60), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 5/74 (6%)

Query: 190 IPKIEREYKQKVTEVEDKIEKVNKLADQYGPEVIKNKDHSERLTIAIADKRNDLQVLIDH 249
           I K++ E  +  T++ED ++K     D    ++ +     E LT      +  L +L+D 
Sbjct: 727 IEKVKEELTEAKTKLEDAVKK-----DGLTGKLAEATKKLEALTNNGGGDKGALHILVDS 781

Query: 250 YDSIVKQVGLASKE 263
               + QV  ASKE
Sbjct: 782 GPGSLHQVATASKE 795



>EAY07961.1 on XP_816853   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1044

 Score = 26.6 bits (57), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 4/48 (8%)

Query: 104 FQDTKPEEGPHVFYGKVLQPNEPPAETNFLQLSEMIDRLMDHGDIDAE 151
           +QDT  EE   +  G  LQP +P +     +L+E+ D  M  G  D E
Sbjct: 808 WQDTPNEENKSMQRGSDLQPQDPQS----TKLTEVTDVEMSSGSYDEE 851




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07964.1 DnaJ domain containing protein [Trichomonas
vaginalis G3]
         (501 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001348165  RESA  (Others)  [plasmodium falciparum]                  33   0.045
XP_827769  VSG  (Establishment)  [Trypanosoma brucei]                  30   0.43 
CAD42814  gp63  (Invasion)  [Leishmania donovani]                      28   1.1  
CAD42816  gp63  (Invasion)  [Leishmania donovani]                      28   1.1  
XP_807799   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   6.9  
XP_001609667  variant erythrocyte surface antigen-1, alpha subun...    26   7.9  

>EAY07964.1 on XP_001348165  RESA  (Others)  [plasmodium falciparum]
          Length = 1085

 Score = 33.1 bits (74), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 4/65 (6%)

Query: 379 YYKILGVPRSATQSEIKTAFRKATIKWHPDRHRGEEEKKDAEQMMKKINVAYDILSDPQK 438
           YY ILGV  +A  +EI   + K    ++P +  G           +K+N AY +L D  K
Sbjct: 524 YYDILGVGVNADMNEITERYFKLAENYYPYQRSG----STVFHNFRKVNEAYQVLGDIDK 579

Query: 439 KQMYD 443
           K+ Y+
Sbjct: 580 KRWYN 584



>EAY07964.1 on XP_827769  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 533

 Score = 29.6 bits (65), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 14/33 (42%), Positives = 19/33 (57%)

Query: 214 CNANLDEASKHFADSMKTKGAPKEYRAAKGHVR 246
           C    D+ ++  A S +T+GAPKE  AA G  R
Sbjct: 421 CTPTEDQVAEQPARSTETEGAPKEGAAATGCAR 453



>EAY07964.1 on CAD42814  gp63  (Invasion)  [Leishmania donovani]
          Length = 255

 Score = 28.1 bits (61), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 27/119 (22%), Positives = 44/119 (36%), Gaps = 21/119 (17%)

Query: 50  GDNYKAADPKAIRLRAQCALHMGMSEESKKEATFVIGNRKITGDEKLLCYQIRARANLQL 109
            D    + P  +R     AL + +S E   +  +              C ++  R N   
Sbjct: 87  ADRRPGSAPTVVRAANWGALRIAVSTEDLTDPAY-------------HCARVGQRVNNHA 133

Query: 110 GNFKDAS-DDARNSQNQRVQRDVSTMYQYYQEYQNH---LKYKKLQDAARYLDKVLEVC 164
           G     + DD    +    +RD+   Y   Q  Q H   LK +++QD  +  D V E+C
Sbjct: 134 GAIATCTADDILTDE----KRDILVKYLIPQALQLHTERLKVRQVQDKWKVTDMVDEIC 188



>EAY07964.1 on CAD42816  gp63  (Invasion)  [Leishmania donovani]
          Length = 255

 Score = 28.1 bits (61), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 27/119 (22%), Positives = 44/119 (36%), Gaps = 21/119 (17%)

Query: 50  GDNYKAADPKAIRLRAQCALHMGMSEESKKEATFVIGNRKITGDEKLLCYQIRARANLQL 109
            D    + P  +R     AL + +S E   +  +              C ++  R N   
Sbjct: 87  ADRRPGSAPTVVRAANWGALRIAVSTEDLTDPAY-------------HCARVGQRVNNHA 133

Query: 110 GNFKDAS-DDARNSQNQRVQRDVSTMYQYYQEYQNH---LKYKKLQDAARYLDKVLEVC 164
           G     + DD    +    +RD+   Y   Q  Q H   LK +++QD  +  D V E+C
Sbjct: 134 GAIATCTADDILTDE----KRDILVKYLIPQALQLHTERLKVRQVQDKWKVTDMVDEIC 188



>EAY07964.1 on XP_807799   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 345

 Score = 25.8 bits (55), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 15/57 (26%), Positives = 27/57 (47%)

Query: 194 LPKAFPNDMELHYHLGIVATCNANLDEASKHFADSMKTKGAPKEYRAAKGHVREMTH 250
           L K F ++     +LG+ AT     +  +  +AD +K +GA  E+   K    ++ H
Sbjct: 83  LSKNFSDNTWRDEYLGVDATVKKGTNGGAAGYADGVKFQGAWAEWPVGKQGQNQLYH 139



>EAY07964.1 on XP_001609667  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1303

 Score = 25.8 bits (55), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)

Query: 236 KEYRAAKGHVREMTHAYIAAKRALQGPDVPEVEKQL 271
           KEY +AK  + E+ H       ALQ  +VP+V   L
Sbjct: 765 KEYSSAKDKISEVIHKIQEVLTALQ-TEVPQVSSHL 799




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07965.1 hypothetical protein TVAG_332900 [Trichomonas
vaginalis G3]
         (206 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351877  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   2.2  
XP_001350935  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   2.5  
XP_001351080  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   2.5  
XP_001352240  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   3.0  
XP_001349032  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   5.4  
XP_807850   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   8.8  

>EAY07965.1 on XP_001351877  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2270

 Score = 25.8 bits (55), Expect = 2.2,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 29/49 (59%), Gaps = 1/49 (2%)

Query: 109  SFISGYDGCIALNSSENEDPNPNNSSIHYSGISFLQPSMHKGNTTMPLY 157
            + +SG +    ++++  +DP   ++++ YSGI  +  S++ GN  + +Y
Sbjct: 2007 NLLSGEEYSYDMSTNTMDDPKYVSNNV-YSGIDLINDSLNSGNQHIDIY 2054



>EAY07965.1 on XP_001350935  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2268

 Score = 25.8 bits (55), Expect = 2.5,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 27/44 (61%), Gaps = 1/44 (2%)

Query: 114  YDGCIALNSSENEDPNPNNSSIHYSGISFLQPSMHKGNTTMPLY 157
            Y+  I ++++  +DP   ++++ YSGI  +  S++ GN  + +Y
Sbjct: 2026 YNYNINMSTNSMDDPKYVSNNV-YSGIDLINDSLNSGNEHIDIY 2068



>EAY07965.1 on XP_001351080  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2209

 Score = 25.8 bits (55), Expect = 2.5,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)

Query: 122  SSENEDPNPNNSSIHYSGISFLQPSMHKGNTTMPLY 157
            SS N D + + + + YSGI  +  S++ GN  + +Y
Sbjct: 1999 SSSNRD-SLSGTKVPYSGIDLINDSLNSGNQPIDIY 2033




 Score = 25.0 bits (53), Expect = 3.8,   Method: Composition-based stats.
 Identities = 27/76 (35%), Positives = 32/76 (42%), Gaps = 15/76 (19%)

Query: 74   GISLNADMSNNGGI----AGNGYWSGASLEYSG------SGGGGSSFISGYDGCIALNSS 123
            G   N DMSNN GI    +     SG  + YSG      S   G+  I  YD    L   
Sbjct: 1983 GEEYNYDMSNNSGIYPSSSNRDSLSGTKVPYSGIDLINDSLNSGNQPIDIYDEI--LKRK 2040

Query: 124  ENEDPNPNN---SSIH 136
            ENE    N+   +SIH
Sbjct: 2041 ENELFGTNHVKQTSIH 2056



>EAY07965.1 on XP_001352240  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 1315

 Score = 25.4 bits (54), Expect = 3.0,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 25/40 (62%), Gaps = 1/40 (2%)

Query: 118  IALNSSENEDPNPNNSSIHYSGISFLQPSMHKGNTTMPLY 157
            I ++++  +DP   ++++ YSGI  +  S++ GN  + +Y
Sbjct: 1092 INMSTNTMDDPKYVSNNV-YSGIDLINDSLNSGNQPIDIY 1130



>EAY07965.1 on XP_001349032  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2267

 Score = 24.6 bits (52), Expect = 5.4,   Method: Composition-based stats.
 Identities = 16/46 (34%), Positives = 23/46 (50%)

Query: 80   DMSNNGGIAGNGYWSGASLEYSGSGGGGSSFISGYDGCIALNSSEN 125
            ++ NN   +G    SG ++ YSG+ G  S   S Y G   +N S N
Sbjct: 1991 NIGNNDLYSGFDPKSGDNVSYSGTIGSISDKTSPYSGIDLINDSLN 2036



>EAY07965.1 on XP_807850   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 875

 Score = 23.9 bits (50), Expect = 8.8,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 2/33 (6%)

Query: 75  ISLNADMSNNGGIAGNGYWSGASLEYSGSGGGG 107
           + +NA +SNNG  A  G  +G  ++++G G G 
Sbjct: 530 LGVNATVSNNGAAAATGPSNG--VKFTGRGAGA 560




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07967.1 hypothetical protein TVAG_332920 [Trichomonas
vaginalis G3]
         (929 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001350797  PfEMP1  (Establishment)  [Plasmodium falciparum]         29   1.5  
XP_807279   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   2.9  
XP_966307  PfEMP1  (Establishment)  [Plasmodium falciparum]            27   6.4  
ACB87908  Rh5  (Adhesin)  [Plasmodium falciparum]                      27   6.6  

>EAY07967.1 on XP_001350797  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2287

 Score = 29.3 bits (64), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 19/83 (22%), Positives = 41/83 (49%), Gaps = 4/83 (4%)

Query: 71   READKEPNVFTILKERREEEENCLDFLDVNRRILRQRNSDLVDDRLNADYQHYLYKYIRY 130
            +EA K+ ++F  +   R++E  C  F DV+  +L   N D + D+ N   +    +++ Y
Sbjct: 1486 KEACKDADIFKGI---RKDEWKCGKFCDVDVCVLENFNKD-IHDKKNVLIRTLFKRWLEY 1541

Query: 131  QAENETTLKAELKEAYSNKQKFS 153
              ++   + A+     +N + F+
Sbjct: 1542 FLQDYIKINAKFSHCTNNGEGFA 1564



>EAY07967.1 on XP_807279   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 872

 Score = 28.1 bits (61), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 3/62 (4%)

Query: 38  NARLFVDKKEGIRTMRL---RELEAAQEREEKERLEREADKEPNVFTILKERREEEENCL 94
           N R  VD   GI+  RL   +++  A  +    R     + + +VF I + R ++E+ C 
Sbjct: 113 NVREAVDALMGIKWERLDNWKDMANAGSKYGSLRCPSLVEVQGHVFAIAEARCKDEDKCS 172

Query: 95  DF 96
           DF
Sbjct: 173 DF 174



>EAY07967.1 on XP_966307  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2238

 Score = 26.9 bits (58), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 4/65 (6%)

Query: 564  NQLHVRMVDHLTKARSEMLSYLFRPGNSQQHVIEFQQWHCTQVERGMRRMSKVKDECNLR 623
            N   V+  D LT   + +  ++ RP     +    ++W  T      +R+ ++K EC + 
Sbjct: 1192 NDTEVKGQDGLTPQTTHLSKFVLRP----PYFRYLEEWGETFCRERKKRLKQIKHECKVE 1247

Query: 624  LNSLR 628
             N  R
Sbjct: 1248 ENGDR 1252



>EAY07967.1 on ACB87908  Rh5  (Adhesin)  [Plasmodium falciparum]
          Length = 526

 Score = 26.9 bits (58), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 5/83 (6%)

Query: 587 RPGNSQQHVIEFQQWHCTQVERGMRRMSKVKDECNLRLNSLREQ-----LISIENDRKSE 641
           +  N++ H    + +  T V  G++ +        ++  S+  Q     L++ +ND K+ 
Sbjct: 72  KTNNAKDHSTYIKSYLNTNVNDGLKYLFIPSHNSFIKKYSVFNQINDGMLLNEKNDVKNN 131

Query: 642 EEYKQKDLMNSSFRTTLFETISN 664
           E+YK  D  N +F    F+ +SN
Sbjct: 132 EDYKNVDYKNVNFLQYHFKELSN 154




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07971.1 hypothetical protein TVAG_332960 [Trichomonas
vaginalis G3]
         (127 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_821693   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   1.2  
XP_810383   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   2.7  

>EAY07971.1 on XP_821693   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 834

 Score = 25.4 bits (54), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 31/51 (60%), Gaps = 10/51 (19%)

Query: 25  NVSTVLTQVIVDNNGKPYTRATLSAHVETLNPAEIEKDPDAPAIEHDVIIA 75
           +VS  +T V++ N  +P++ +  +A        ++E+D D+P++E + I+A
Sbjct: 715 DVSVTVTNVLLYN--RPFSFSGENA--------DVEEDADSPSVEGEQIVA 755



>EAY07971.1 on XP_810383   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 928

 Score = 24.3 bits (51), Expect = 2.7,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 6/42 (14%)

Query: 22  AEGNVSTVLTQVIVDNNGKPYTRATLSAHVETLNPAEIEKDP 63
           +E  VS  +T V++      Y R  +SA ++ LNP ++   P
Sbjct: 694 SEEEVSVTVTNVLL------YNRPLISAEIDALNPNKLPIPP 729




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07973.1 hypothetical protein TVAG_332980 [Trichomonas
vaginalis G3]
         (419 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609666  variant erythrocyte surface antigen-1, alpha subun...    30   0.27 
XP_001611147  variant erythrocyte surface antigen-1, alpha subun...    28   0.96 
XP_001609315  variant erythrocyte surface antigen-1, alpha subun...    27   3.3  
XP_807850   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   6.6  
XP_811677   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   6.6  
XP_812794   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   7.2  
XP_001611736  variant erythrocyte surface antigen-1, alpha subun...    25   9.4  

>EAY07973.1 on XP_001609666  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1269

 Score = 30.0 bits (66), Expect = 0.27,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 4/65 (6%)

Query: 187 QIKDVVNQIEKLQSDLPLLGNIQREIDTIRRDN-EEIKDKIARATEDVEEFEKNAADELD 245
           ++KDV   +EK+   +  LGN Q  ++T  +D  E++K+ + +A E +E  +    D+L+
Sbjct: 609 KLKDV---LEKIGEVVVQLGNAQEALETKDKDVIEKVKEALRKAKEGLETAKNGLKDKLE 665

Query: 246 MIKAR 250
             K +
Sbjct: 666 EAKKK 670



>EAY07973.1 on XP_001611147  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1304

 Score = 28.5 bits (62), Expect = 0.96,   Method: Composition-based stats.
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)

Query: 99   GKEDSIRKLSIDLEALQKKCDNQESELQSVVQKNDE 134
            GKE      SID +  +K+CD+  S LQ+V+ KN +
Sbjct: 1175 GKEKG--DYSIDDKGGKKRCDDFLSSLQAVIDKNKQ 1208



>EAY07973.1 on XP_001609315  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1338

 Score = 26.6 bits (57), Expect = 3.3,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 44/85 (51%), Gaps = 7/85 (8%)

Query: 330 LKECTLKSKKQNKKEGDHKKRLQDLIENNEKLVNKIAKRREKLD-----IVMGRFKIEES 384
           + +  +K  + +  +GD  K L+DL+E   ++V ++   +E L+      V+   K+  +
Sbjct: 669 ISDALVKKVEASGGDGDDGKELKDLLEKIGEVVVQLGNAQEALEGKAESKVIEGVKVALT 728

Query: 385 QLKSQIRSIRNSVFEKENELIEQIQ 409
           + K+++  + +      NEL E+I+
Sbjct: 729 KAKTELEGVVDE--NANNELKEKIK 751



>EAY07973.1 on XP_807850   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 875

 Score = 25.8 bits (55), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 12/37 (32%), Positives = 19/37 (51%)

Query: 152 KGKTMIQETNAFKYNITQLKSDIGLYNKNINEIEVQI 188
           KG   +  TN   YN     ++IG +N N   I+V++
Sbjct: 697 KGDVSVTVTNVLLYNRPWDDTEIGAFNPNKANIQVEV 733



>EAY07973.1 on XP_811677   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 935

 Score = 25.8 bits (55), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 152 KGKTMIQETNAFKYNITQLKSDIGLYNKNINEIEVQIKDVVNQIEKLQS 200
           KG   +  TN   YN     ++IG +N N   I V++   V + E +QS
Sbjct: 705 KGDVSVTVTNVLLYNRPWDDTEIGAFNPNKANIPVEVDRPV-EGEAIQS 752



>EAY07973.1 on XP_812794   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 936

 Score = 25.4 bits (54), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)

Query: 151 SKGKTMIQETNAFKYNITQLKSDIGLYNKNINEIEVQIKDVVNQIEKLQS 200
           S+G   +  TN   YN     ++IG +N N   + V++   V + E +QS
Sbjct: 755 SRGDVSVTVTNVLLYNRPWDDTEIGAFNPNKANVPVEVDRPV-EGEAIQS 803



>EAY07973.1 on XP_001611736  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1365

 Score = 25.0 bits (53), Expect = 9.4,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 31/56 (55%), Gaps = 2/56 (3%)

Query: 318 LSHETDTNIDQLLKECTLKSKKQNKKEGDHKKRLQDLIENNEKLVNKIAKRREKLD 373
           + H+  + ++++ +E  L+        GD  + L+DL+E   ++V ++   +E+LD
Sbjct: 680 MEHDRKSRVNKVKEE--LRKVVPQGNSGDLPEALKDLLEKIGEVVVQLGNAQERLD 733




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07975.1 hypothetical protein TVAG_333000 [Trichomonas
vaginalis G3]
         (145 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_821088   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   6.7  
XP_804553   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   7.2  
XP_811916   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   7.4  
XP_656145  Lgl1  (Adhesin)  [Entamoeba histolytica]                    23   7.7  
Q03077  Lgl2  (Adhesin)  [Entamoeba histolytica]                       23   7.8  

>EAY07975.1 on XP_821088   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 910

 Score = 23.5 bits (49), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 13/30 (43%), Positives = 17/30 (56%)

Query: 38  IAMKSKPTTIRSLSKQTSADISGTPKVTYY 67
           + + SK T    LSK+TSAD  G P V  +
Sbjct: 291 LIIYSKDTKSWKLSKETSADGCGDPSVLEW 320



>EAY07975.1 on XP_804553   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 827

 Score = 23.5 bits (49), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 49  SLSKQTSADISGTPKVTYYPPGYTGYIPCEFKGNRSYVPRE 89
           SLS+ TS    G P++T +       + CE  G R Y  R+
Sbjct: 325 SLSEGTSHPKCGAPRITEWEGSLLMIVDCE-SGQRVYESRD 364



>EAY07975.1 on XP_811916   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 685

 Score = 23.5 bits (49), Expect = 7.4,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 50  LSKQTSADISGTPKVTYYPPGYTGYIPCEFKGNRSYVPRE 89
           LS  TS +  G P++T +       + CE  G R Y  R+
Sbjct: 273 LSNGTSPERCGAPRITEWEGSLLMIVDCE-NGQRVYESRD 311



>EAY07975.1 on XP_656145  Lgl1  (Adhesin)  [Entamoeba histolytica]
          Length = 288

 Score = 23.1 bits (48), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 11/20 (55%), Positives = 13/20 (65%)

Query: 4   SELPPEYNSTIKPKLDGKTA 23
           +E  PEYNST K   +GKT 
Sbjct: 198 TEWYPEYNSTTKYTQNGKTV 217



>EAY07975.1 on Q03077  Lgl2  (Adhesin)  [Entamoeba histolytica]
          Length = 288

 Score = 23.1 bits (48), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 11/20 (55%), Positives = 13/20 (65%)

Query: 4   SELPPEYNSTIKPKLDGKTA 23
           +E  PEYNST K   +GKT 
Sbjct: 198 TEWYPEYNSTTKYTQNGKTV 217




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07977.1 hypothetical protein TVAG_333020 [Trichomonas
vaginalis G3]
         (425 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_954175  TashAT3  (Establishment)  [Theileria annulata]              28   1.6  
XP_954177  TashAT1  (Establishment)  [Theileria annulata]              27   1.6  
XP_815749   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   3.1  
XP_821162   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   4.5  
XP_812613   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   5.9  
XP_001611736  variant erythrocyte surface antigen-1, alpha subun...    26   6.8  
P13403  GRA1  (Establishment)  [Toxoplasma gondii]                     25   8.7  

>EAY07977.1 on XP_954175  TashAT3  (Establishment)  [Theileria annulata]
          Length = 994

 Score = 27.7 bits (60), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 8/70 (11%)

Query: 74  LRPPEEKLKDIEARL--------DENLEEIDRFNLLMKQKCYIYVVYGETSEEALRVHAS 125
           L  PE+K+ +I ++          E ++   RF+     K  I +  G   +EA++    
Sbjct: 53  LSTPEDKITEIRSKRKLIWGSDRGEYVKCFTRFSFESSDKTLITIEIGNAVDEAMKFIYV 112

Query: 126 LGDFYNFSNK 135
            G+FY + NK
Sbjct: 113 SGNFYKYINK 122



>EAY07977.1 on XP_954177  TashAT1  (Establishment)  [Theileria annulata]
          Length = 463

 Score = 27.3 bits (59), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 8/70 (11%)

Query: 74  LRPPEEKLKDIEARL--------DENLEEIDRFNLLMKQKCYIYVVYGETSEEALRVHAS 125
           L  PE+K+ +I ++          E ++   RF+     K  I +  G   +EA++    
Sbjct: 52  LSTPEDKITEIRSKRKLIWGSDRGEYVKCFTRFSFESSDKTLITIEIGNAVDEAMKFIYV 111

Query: 126 LGDFYNFSNK 135
            G+FY + NK
Sbjct: 112 SGNFYKYINK 121



>EAY07977.1 on XP_815749   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1053

 Score = 26.6 bits (57), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 11/74 (14%)

Query: 293 ELHEEEEVKEEEEAKEEEEKKESEQNNDSQAETKSLSLTDGLKEQITEKIEDEKLE--AD 350
           EL E  +VK   E+ +  + +E E+ ND         ++DG    +T  +  E +   AD
Sbjct: 842 ELTEVADVKGPSESNDTPQPEEEEEAND---------MSDGTTSPLTASLSMETVTAPAD 892

Query: 351 GEQDLNKEEEEKNE 364
           GE  L ++ E  NE
Sbjct: 893 GEHQLQQKVELSNE 906



>EAY07977.1 on XP_821162   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 787

 Score = 26.2 bits (56), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 285 AEAIAPFLELHEEEEVKEEEEAKEEEEKKESEQ 317
           A A+   L+LH  EEV E   AK    + E  Q
Sbjct: 725 APAVPMTLDLHAVEEVSESGAAKRNTSRTEGVQ 757



>EAY07977.1 on XP_812613   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1038

 Score = 25.8 bits (55), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 19/66 (28%), Positives = 31/66 (46%)

Query: 358 EEEEKNEEEEEEEEKKEPEQDQKQPTLNLGESVQKVAEEIASAEDNNEEQNVEKNSTADS 417
           E  E + +E+EE     P       TL  G S+ + A    SAE++  E N + +    S
Sbjct: 740 ELTESDTDEQEEGIVNGPVPAASSSTLFAGASISESAIAAQSAENSFSEDNAQPSGDETS 799

Query: 418 FESTSN 423
           +++T N
Sbjct: 800 WQTTLN 805



>EAY07977.1 on XP_001611736  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1365

 Score = 25.8 bits (55), Expect = 6.8,   Method: Composition-based stats.
 Identities = 11/32 (34%), Positives = 18/32 (56%)

Query: 366  EEEEEEKKEPEQDQKQPTLNLGESVQKVAEEI 397
            E  E++K++P Q  K P  NL   V ++  +I
Sbjct: 1241 ENAEKDKQDPSQQDKHPLTNLLTQVGQLQYDI 1272



>EAY07977.1 on P13403  GRA1  (Establishment)  [Toxoplasma gondii]
          Length = 190

 Score = 24.6 bits (52), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 12/27 (44%), Positives = 19/27 (70%)

Query: 384 LNLGESVQKVAEEIASAEDNNEEQNVE 410
           LN GE+V++  E++A AE  N EQ ++
Sbjct: 120 LNKGETVEEAIEDVAQAEGLNSEQTLQ 146




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07981.1 TKL family protein kinase [Trichomonas
vaginalis G3]
         (960 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    54   1e-08

>EAY07981.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 54.3 bits (129), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 58/109 (53%), Gaps = 4/109 (3%)

Query: 279 RGLEYLHSKGVIHRDLKSLNVLLDDNNNA-KICDFGMVR-TRDSRPMTGMIGTVHWMAPE 336
           + + Y HS+G++HRD+K  NV++D      ++ D+G+       +  +  + T ++  PE
Sbjct: 158 KAMNYCHSQGIMHRDIKPHNVMIDHEKKILRLIDWGLAEFYHPEQEYSVRVATRYYKGPE 217

Query: 337 VLMSTPFYDERVDVYSFGIFLWELLTGQMP--YKDMQANQIIRTVTELG 383
           +L+   +YD  +D++S G  L  ++  + P  Y     +Q+++    LG
Sbjct: 218 LLVDMRYYDYSLDIWSIGCMLAGIIFKKEPFFYGHDNYDQLVKIAKVLG 266




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07986.1 hypothetical protein TVAG_333110 [Trichomonas
vaginalis G3]
         (516 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351079  PfEMP1  (Establishment)  [Plasmodium falciparum]         33   0.033
XP_001351564  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   1.4  
XP_001349738  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   1.6  
XP_805204   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   6.7  

>EAY07986.1 on XP_001351079  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2203

 Score = 33.5 bits (75), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 5/60 (8%)

Query: 71  IKDIKLNDEQTALVRELDQKIADIGEVV-----IPPSEEIEKLREEYEKKISTLRGRIES 125
           I   K  D  + +  EL +  ADIG++V        ++E +K R+E EK + T+ G+I S
Sbjct: 163 IYQTKYKDSGSTMCTELARSFADIGDIVRGRDLFRGNDEEKKKRDELEKNLKTIFGKIHS 222



>EAY07986.1 on XP_001351564  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2207

 Score = 28.1 bits (61), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 12/80 (15%)

Query: 63  NNIHLNRDIKDIKLNDEQTALVRELDQKIADIGEVVIPPSEEIEKLREEYEK-------- 114
           ++I  ++++K    N++ T  +RE   K     + V+   +E ++L E YEK        
Sbjct: 620 DSIDWSKELKTCINNEKPTNCIRECKSKCDCFKKWVVQKEQEWKQLEEHYEKENFSGDFG 679

Query: 115 -KIS---TLRGRIESHYIQL 130
            +IS   TL G ++  Y+++
Sbjct: 680 PRISPYVTLEGNLQYSYLEM 699



>EAY07986.1 on XP_001349738  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2162

 Score = 28.1 bits (61), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 12/80 (15%)

Query: 63  NNIHLNRDIKDIKLNDEQTALVRELDQKIADIGEVVIPPSEEIEKLREEYEK-------- 114
           ++I  ++++K    N++ T  +RE   K     + V+   +E ++L E YEK        
Sbjct: 620 DSIDWSKELKTCINNEKPTNCIRECKSKCDCFKKWVVQKEQEWKQLEEHYEKENFSGDFG 679

Query: 115 -KIS---TLRGRIESHYIQL 130
            +IS   TL G ++  Y+++
Sbjct: 680 PRISPYVTLEGNLQYSYLEM 699



>EAY07986.1 on XP_805204   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 978

 Score = 25.8 bits (55), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 4/32 (12%)

Query: 27  ERSPRQNNEKPQQPQ----DGQPQRQERRPNN 54
           E +P + NE+P        +G P+RQ   PNN
Sbjct: 700 EATPVKRNEEPHGSHAALGNGDPERQNTSPNN 731




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07990.1 Adaptor complexes medium subunit family
protein [Trichomonas vaginalis G3]
         (436 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAB65410  AMA1  (Invasion)  [Toxoplasma gondii]                        28   0.63 
P09194  GPI-PLC  (Others)  [Trypanosoma brucei]                        27   1.6  
XP_001349738  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   2.3  

>EAY07990.1 on AAB65410  AMA1  (Invasion)  [Toxoplasma gondii]
          Length = 255

 Score = 28.5 bits (62), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 13/40 (32%), Positives = 22/40 (55%)

Query: 63  LYFVVATPENMSPSTLELLLRRITVVLSDYLGKCTELSIQ 102
           L FV  + + +SP  +ELL +   +  S  LG+C E + +
Sbjct: 133 LNFVTPSGQRISPFPMELLEKNSNIKASTDLGRCAEFAFK 172



>EAY07990.1 on P09194  GPI-PLC  (Others)  [Trypanosoma brucei]
          Length = 358

 Score = 27.3 bits (59), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 65  FVVATPENMS--PSTLELLLRRITVVLSDYLGKCTELSIQKNL 105
           F +  PE +   P  +  LLR +TV +S   G+C  LSI++ L
Sbjct: 47  FGLDAPEKLRSLPPYVTFLLRFLTVGVSSRWGRCQNLSIRQLL 89



>EAY07990.1 on XP_001349738  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2162

 Score = 27.3 bits (59), Expect = 2.3,   Method: Composition-based stats.
 Identities = 11/21 (52%), Positives = 14/21 (66%)

Query: 221  SQAFFKTRNMPKNLLYEYDDI 241
            SQ +  T+N PKN  YEYD +
Sbjct: 1133 SQLWDTTKNKPKNRQYEYDQV 1153




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY07992.1 3'5'-cyclic nucleotide phosphodiesterase
family protein [Trichomonas vaginalis G3]
         (1213 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_806415   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.42 
XP_001218755  VSG  (Establishment)  [Trypanosoma brucei]               28   3.3  
XP_802467   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   4.2  

>EAY07992.1 on XP_806415   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 121

 Score = 29.6 bits (65), Expect = 0.42,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 35/94 (37%), Gaps = 3/94 (3%)

Query: 74  IEKMKMQNTVAQPTFVLTNSVTQDTEEEKETKSNTSVKTQPQPQTNPPNPTTLVPASSRT 133
           +E+   +   A P +       + T    E   +  V T P  ++  P  T +   S+ T
Sbjct: 12  VERPIYEEEAASPEWATERQTQETTAPLVENGDSEDVGTAPGNKSTLPGETKIPSGSNAT 71

Query: 134 --TDKSFLLHSGRHLQQHLKMEECFDKIVSGCSS 165
             +D   LL  G HL     M    D  V GC S
Sbjct: 72  SLSDHDVLLEHG-HLSDLAAMALIGDSTVHGCVS 104



>EAY07992.1 on XP_001218755  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 526

 Score = 28.1 bits (61), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%)

Query: 389 SAYNEKIDGNGDYSVLSIPVRD--PNMPVTYAIVLRGKR 425
           S + +K+D N DY+    P RD  P     YA+  + KR
Sbjct: 70  STFMDKVDVNKDYATADQPFRDARPGWEKNYALFSKAKR 108



>EAY07992.1 on XP_802467   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 172

 Score = 27.3 bits (59), Expect = 4.2,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 8/78 (10%)

Query: 197 LYCPSTTTYCPHGSGLVG--YTQFVRKTLN------IPIANEHISYDYKTEYANCPPDAH 248
           L+ P TT   P G G +G  +  FV  +L          A  ++   Y TEY    P + 
Sbjct: 86  LFVPQTTLVLPEGGGTLGTKWDSFVSPSLVSAGGVIAAFAEGYVYGQYNTEYVLIKPYSS 145

Query: 249 VLVFPLYDGSSHVKCIVE 266
            +V    D S     +VE
Sbjct: 146 EVVAEYIDSSWDWSTLVE 163




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08003.1 hypothetical protein TVAG_115620 [Trichomonas
vaginalis G3]
         (692 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAO72426  SAG1  (Others)  [Toxoplasma gondii]                          28   1.7  
AAR87667  MIC3  (Invasion)  [Eimeria tenella]                          28   2.0  
XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 27   4.4  

>EAY08003.1 on AAO72426  SAG1  (Others)  [Toxoplasma gondii]
          Length = 255

 Score = 28.1 bits (61), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 10/19 (52%), Positives = 14/19 (73%)

Query: 301 SLMACNDKLFKDVIEKLKE 319
           +L  CN+K FKD++ KL E
Sbjct: 234 TLTGCNEKSFKDILPKLSE 252



>EAY08003.1 on AAR87667  MIC3  (Invasion)  [Eimeria tenella]
          Length = 255

 Score = 27.7 bits (60), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 16/79 (20%), Positives = 36/79 (45%), Gaps = 4/79 (5%)

Query: 231 TSSSILLEVIQESMPFFTIEHLDLCIEKYLFSLIHNIIFDKINLKEDDDMIEQKYQEFDQ 290
           + S  + E +Q ++  F +E  +      L +  ++ ++     ++D     QK +E+  
Sbjct: 32  SGSQAVPEALQHALDAFCVEEGEKACSNGLKAYCNSAMY----ARKDVGNTTQKTKEWRC 87

Query: 291 FSPSEIGISISLMACNDKL 309
           ++ SEI  ++S   C D  
Sbjct: 88  YAASEIDFAVSADVCADNC 106



>EAY08003.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 26.9 bits (58), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 4/64 (6%)

Query: 167  ELGLQIRTFAIEIESLTNPQTEIPDFIDKMRNKLISFLKNEANTPKIKPIFN----YTTI 222
            EL   +    I+I S+ N + +I + ID + NKL      + N  K K IF+    Y T+
Sbjct: 2033 ELSTALYDLKIQITSVINRENDISNNIDIVSNKLNEIDAIQYNFEKYKEIFDNVEEYKTL 2092

Query: 223  DEYK 226
            D+ K
Sbjct: 2093 DDTK 2096




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08007.1 hypothetical protein TVAG_115660 [Trichomonas
vaginalis G3]
         (475 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001347690  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   4.9  

>EAY08007.1 on XP_001347690  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2215

 Score = 26.2 bits (56), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 15/84 (17%)

Query: 251  DFLKSVLELGLTLIPDQESFSTPELSVGLLLYFRVIFDRLY-----ELYPDILFVKKENE 305
            D LK+ +  G+ L           L+  + LY +VI+  +Y      L+  +   KK   
Sbjct: 1760 DILKTTIPFGIALA----------LTSIVFLYLKVIYIVVYMYIYIYLWMYMYVWKKTKS 1809

Query: 306  AVKMAQLSNLPCELYLLPEKSSPD 329
             + + ++ N+P   Y +P K SP+
Sbjct: 1810 TIDLLRVINIPKSDYDIPTKRSPN 1833




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08017.1 hypothetical protein TVAG_115760 [Trichomonas
vaginalis G3]
         (1709 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_815822   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   1.8  
XP_818394   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   1.8  
XP_807279   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   2.6  
XP_804892   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   4.5  
CAB92983  SBP1  (Others)  [Plasmodium falciparum]                      28   4.8  
XP_817719   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   4.9  
XP_810068   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   5.6  
XP_001707641  CWP3  (Others)  [Giardia duodenalis]                     27   6.7  
XP_808062   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   8.4  

>EAY08017.1 on XP_815822   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 884

 Score = 29.6 bits (65), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 10/112 (8%)

Query: 244 YNFRILSSVSPAKIPADFPQFTPRLVDYGDMRTNDSKEVVIQIT-NPSQLDYTCQIGSFS 302
           YNF ++++VS  K+P +     P +     ++ ND K V + ++ N  +  +  Q G  +
Sbjct: 638 YNFTLVATVSIDKVPEEGDTPIPLI----GVKLNDGKTVFLGLSYNNKEKKWMLQCGGGT 693

Query: 303 ESFKREPLLFKTALRSQLERQTTVVLNSQSTRTIYVHYTPTYNENASPGTFE 354
                +P    +      +R   +VL + +  T YV      NE  + G  E
Sbjct: 694 -----KPEELSSPGEPGTKRHVAIVLQNGNQGTAYVDGQRVGNEQCAFGNSE 740



>EAY08017.1 on XP_818394   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1059

 Score = 29.6 bits (65), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 20/80 (25%), Positives = 35/80 (43%)

Query: 498 YYSLISDGKAIHSLDFNFVSANFPAIKSLTIKNTSKEVIKMSIKSSTPQLQLYEEIFDPN 557
           Y++++ + + IH   +N    N   I    I   SK+        +   + LY E+FD N
Sbjct: 656 YWTVVVNREEIHKTKYNTSLFNSHRISHFYIGGDSKDQSATGGHVTVTNVMLYNELFDDN 715

Query: 558 DLIHSTSTSSISSMQIEQPP 577
                 S  +I S+ +E+ P
Sbjct: 716 LYELHASKVTIPSLGVEKQP 735



>EAY08017.1 on XP_807279   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 872

 Score = 29.3 bits (64), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 1/88 (1%)

Query: 499 YSLISDGKAIHSLDFNFVSANFPAIKSLTIKNTSKEVIKMSIKSSTPQLQLY-EEIFDPN 557
           +++I DGK IH+  +N    +   I    I   SK+        +   + LY E++F   
Sbjct: 690 WTIIVDGKEIHNTKYNKSLFDLHRISHFYIGGDSKDRSATGGHVTVTNVMLYNEKLFGSE 749

Query: 558 DLIHSTSTSSISSMQIEQPPEMSIQGVN 585
               + S  +I S+ +E+ P   + G +
Sbjct: 750 LHKLNASKVTIPSLDVEEQPTGQVAGTD 777



>EAY08017.1 on XP_804892   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1046

 Score = 28.5 bits (62), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 1/81 (1%)

Query: 498 YYSLISDGKAIHSLDFNFVSANFPAIKSLTIKNTSKEVIKMSIKSSTPQLQLYEEIFDPN 557
           Y+++  DG+ IH  ++N    +   I    I   SK+      + +   + LY E    +
Sbjct: 643 YWTVFVDGEEIHHTEYNTSLFDSHRISHFYIGGDSKDQSATGGRVTVTNVMLYNEELSED 702

Query: 558 DLIH-STSTSSISSMQIEQPP 577
           DL     S  +I S+ +E+ P
Sbjct: 703 DLNELPDSKVTIPSLGVEEQP 723



>EAY08017.1 on CAB92983  SBP1  (Others)  [Plasmodium falciparum]
          Length = 391

 Score = 28.1 bits (61), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)

Query: 1057 LNPNESINVPVELICLTTGNKEKLITITTPTSSVCCHIKLEAVYQPLLSFPTLPVTKQ 1114
            LNPNES +  ++L  +     EK+I+I +  ++V C I L++V      +  L V K+
Sbjct: 224  LNPNESCDQIIKLGDIINSVNEKIISINSTVNNVLC-INLDSVNGNGFVWTLLGVHKK 280



>EAY08017.1 on XP_817719   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1053

 Score = 28.1 bits (61), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 3/81 (3%)

Query: 499 YSLISDGKAIHSLDFNFVSANFPAIKSLTIKNTSKEVIKMSIKSSTPQLQLYEEIFDPND 558
           +S+  DGK IH+  +N    +F  I    I   SK+        +   + LY E     D
Sbjct: 650 WSVFVDGKEIHNTKYNTSLFDFHRISHFYIGGDSKDRSATGGHVTVTNVMLYNEELLEGD 709

Query: 559 LIHSTSTS--SISSMQIEQPP 577
           L H  +    +I S+ +E+ P
Sbjct: 710 L-HKLNAGKVTIPSLGVEEQP 729



>EAY08017.1 on XP_810068   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1147

 Score = 28.1 bits (61), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 2/107 (1%)

Query: 499 YSLISDGKAIHSLDFNFVSANFPAIKSLTIKNTSKEVIKMSIKSSTPQLQLYEEIFDPND 558
           +++I D K IH+  ++    N   I    I   SK+        +   + LY E    ND
Sbjct: 745 WTVIVDKKEIHNKKYDKNLFNSHRISHFYIGGDSKDRSATGGHVTVTNVMLYNEELLRND 804

Query: 559 LIH-STSTSSISSMQIEQPPEMSIQGVNSIKQLSMTMNQNSSFFNNM 604
           L    TS  +I S+ +E+ P   + G + +   S + ++ S+ +  +
Sbjct: 805 LRKLKTSKVTIPSLGVEEQPTGQVAGTD-VSVASESRSEESAIYEEL 850



>EAY08017.1 on XP_001707641  CWP3  (Others)  [Giardia duodenalis]
          Length = 247

 Score = 27.3 bits (59), Expect = 6.7,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 21/41 (51%)

Query: 597 NSSFFNNMYLYGTEKSDADICLFYERQLEAFSDLKEKSLKG 637
           N ++ +++YL G    D+D+CL          D+ + SL G
Sbjct: 78  NLTYLSSLYLSGNNLKDSDLCLLGGLSYLRVLDMTDTSLDG 118



>EAY08017.1 on XP_808062   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 825

 Score = 27.3 bits (59), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 1/91 (1%)

Query: 496 SNYYSLISDGKAIHSLDFNFVSANFPAIKSLTIKNTSKEVIKMSIKSSTPQLQLYEEIFD 555
           S+ +++I D K IH+ +++    +   I    I   SK+        +   + LY E   
Sbjct: 637 SDEWTVIVDKKEIHNAEYDKNLFDSHRISHFYIGGDSKDESATGGHLTVTNVMLYNEKLW 696

Query: 556 PNDLIH-STSTSSISSMQIEQPPEMSIQGVN 585
            NDL     S  +I S+ +E+ P   + G  
Sbjct: 697 GNDLDELKASKVTIPSLGVEKQPTGQVTGTG 727




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08019.1 hypothetical protein TVAG_115780 [Trichomonas
vaginalis G3]
         (220 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351319  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   1.3  
XP_001609667  variant erythrocyte surface antigen-1, alpha subun...    26   2.0  

>EAY08019.1 on XP_001351319  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2646

 Score = 26.6 bits (57), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 8/76 (10%)

Query: 141 MRYCNEKEYNLDKYYTGRYLRIIQNEACPGNPPCIALNKLEFFGEVLNDDYSQVEEDFVS 200
           ++   EKE+   K + G+   II+   C       A+ KLEF    LN+D  +  E  + 
Sbjct: 690 VKQKKEKEWEAIKDHFGKQKDIIEQTGCDAGVTLAAVLKLEF----LNEDTEEKSEKGL- 744

Query: 201 YHDDDDDVSIIGHISK 216
              D ++   I H+ +
Sbjct: 745 ---DAEEAKEIKHLRQ 757



>EAY08019.1 on XP_001609667  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1303

 Score = 26.2 bits (56), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/22 (45%), Positives = 11/22 (50%)

Query: 93  RCGCCYNGCCCEGEDFGCPDCC 114
           RC    +GC C GE    PD C
Sbjct: 176 RCSGSRDGCMCSGEQDCTPDKC 197




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08024.1 hypothetical protein TVAG_115830 [Trichomonas
vaginalis G3]
         (547 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001348275  RAP1  (Invasion)  [Plasmodium falciparum]                27   5.2  
XP_829797  VSG  (Establishment)  [Trypanosoma brucei]                  25   9.7  

>EAY08024.1 on XP_001348275  RAP1  (Invasion)  [Plasmodium falciparum]
          Length = 782

 Score = 26.6 bits (57), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 6/56 (10%)

Query: 395 NTQLWPHQLSYGEVDEN-NYLYDPGEFCINDTVSQFEEFDFSKSFNDTISDVQKAL 449
           N  L+ ++ S   ++EN N L + G     D V+Q EEF++ ++      D +KAL
Sbjct: 212 NVNLFNYKYSLNNMEENINILKNEG-----DLVAQKEEFEYDENMEKAKQDKKKAL 262



>EAY08024.1 on XP_829797  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 509

 Score = 25.4 bits (54), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 14/32 (43%), Positives = 21/32 (65%)

Query: 454 KIMAGIDTTNTTSALILGLRLKDQNLIKKSFA 485
           K  AG   T+ TS+L++GL  K +NLI++  A
Sbjct: 267 KHCAGPAKTHLTSSLLMGLITKIKNLIRRVGA 298




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08025.1 Tubulin-tyrosine ligase family protein
[Trichomonas vaginalis G3]
         (542 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001349034  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   9.9  

>EAY08025.1 on XP_001349034  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2215

 Score = 25.4 bits (54), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 1/50 (2%)

Query: 236  NYCDEF-KWKLTELVAELEKRWGRSPSETMKDIYTVVAKTLTSIQSTMTT 284
            N C+++ K K  EL+ +L+K W +  +    DI+T     ++++     T
Sbjct: 2055 NMCEQWDKHKKEELLDKLKKEWEQDYNNNSDDIHTSDNNIVSTVNHVFNT 2104




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08042.1 Dynein heavy chain family protein
[Trichomonas vaginalis G3]
         (3926 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_805783   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           31   1.6  
XP_001608670  variant erythrocyte surface antigen-1, alpha subun...    31   1.8  
XP_817721   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   2.4  
XP_001609101  variant erythrocyte surface antigen-1, alpha subun...    30   2.7  
XP_954179  TashAT2  (Establishment)  [Theileria annulata]              30   3.8  
XP_816821   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   4.0  
XP_812309   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   4.2  
XP_818480   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   4.8  
XP_001349513  PfEMP1  (Establishment)  [Plasmodium falciparum]         29   5.9  
XP_001611736  variant erythrocyte surface antigen-1, alpha subun...    28   9.5  

>EAY08042.1 on XP_805783   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 408

 Score = 30.8 bits (68), Expect = 1.6,   Method: Composition-based stats.
 Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 14/107 (13%)

Query: 3034 EKPEVEAARAKLVVEIAQNKKTLD-------QQMKKILQLLFKSEGNILDNEELIVALQE 3086
            E  E E  +A+L + ++ N    D       ++      LL+KS G+  +NEE ++AL E
Sbjct: 1    EVNEKEKEKARLHLWLSDNTHIADIGPVSGKEEDVAASSLLYKSGGSDDNNEEKLIALYE 60

Query: 3087 AK----ATAKAVTARLEEAEVSEKQNKELCEVYRGVAQRGSTLFFTL 3129
             K     T+  V+ RL E     ++ K++   ++ V +R S L  TL
Sbjct: 61   KKDDIGRTSGMVSVRLTE---QLQRVKKVLATWKEVDERISKLCATL 104



>EAY08042.1 on XP_001608670  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1320

 Score = 30.8 bits (68), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 1/72 (1%)

Query: 670 LMKGMNPKYSALESAYMKMGESKEALIRKWSEHIKNDVSKLSENIVTAQTELAQLTENVD 729
           L  G+N    A+    +++G ++EAL  K  E IK  + KL E     +TEL ++ + ++
Sbjct: 684 LADGLNTLLVAIGQVVVQLGNAQEALEGKDKEGIKGVIKKLEEAKGKLETELTKVKDRLN 743

Query: 730 ESLV-AIKSIDE 740
             L  A K + E
Sbjct: 744 GKLQEATKKLGE 755



>EAY08042.1 on XP_817721   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 922

 Score = 30.4 bits (67), Expect = 2.4,   Method: Composition-based stats.
 Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 3/76 (3%)

Query: 2511 SMLKRG--VSKIEETNSVVGGMEQELVALKPQLEVHAVEVEKLLKELEGDKKVLEEKKAT 2568
            S+LK G  V  + E     GG+    VA +P     A + E+ L + +  K++LEE  +T
Sbjct: 95   SLLKVGDDVFAVAEAQCKNGGVSFTGVASQPLTTKTADKPEEALTDPKAKKQLLEEGTST 154

Query: 2569 VETEKVEVQKKADVAE 2584
             E +KV+V +   V E
Sbjct: 155  -EVKKVDVSRPTTVVE 169



>EAY08042.1 on XP_001609101  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1359

 Score = 30.4 bits (67), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 3/109 (2%)

Query: 2499 LGKRQKKLEEEQSMLKRGVSKIEETNSVVGGMEQELVALKPQLEVHAVEVEKLLKELEGD 2558
            LG  Q++LE+    +   ++ +++ + V G   + +  L+  L+V    VEKL++ ++  
Sbjct: 679  LGNAQEELEKSGGNVNIALAAVKKVSGVNGSDLKGV--LEKVLDVVLGVVEKLVEGVKEK 736

Query: 2559 KKVLEEKKATVETEKVEVQKKADVAEVLATKAAAERDAILPMLKSAMEA 2607
             K LEE K T+E  K ++++     E L   A  E +     L +A +A
Sbjct: 737  VKALEEIKKTLEAAKEKLEEAKKTQEALEA-AKGELEGAKGALTTAKKA 784



>EAY08042.1 on XP_954179  TashAT2  (Establishment)  [Theileria annulata]
          Length = 1161

 Score = 30.0 bits (66), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 67/148 (45%), Gaps = 23/148 (15%)

Query: 802 KELDAVEFQTNIEKTKRTVDFLVRNFPTSQLAATLKDSVTDFFQLAPIISTVRSKALQDR 861
           KE+   E    IEK K T +    + PT  +     ++ TD  QL  I +    + ++D 
Sbjct: 297 KEIVGREVDKIIEKYKITKETQT-DIPTGSI-----ETQTDIQQLENIDTQTDIQEVED- 349

Query: 862 HWERIEKMVDVRGLRTGDLKV-SALVEAGAVKYSEEFAVIAVEAENEQTLLKMIEDILIE 920
               IE   D   L TG +++ + + E   +    +    ++E    QT ++ +EDI   
Sbjct: 350 ----IETQTD---LPTGSIEIQTDIQEVENIDTQTDIPTGSIET---QTDIQEVEDI--- 396

Query: 921 WAGVRFEIINNADTNVQTLGGLADITEI 948
              ++ +I    D  +QT+G  +DITE+
Sbjct: 397 --DIQTDIQEVEDIGIQTIGNFSDITEV 422



>EAY08042.1 on XP_816821   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 782

 Score = 29.6 bits (65), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)

Query: 3065 QLLFKSEGNILDNEELIVALQEAKATAKAVTARLEEAEVSE--KQNKELCEVYRGVAQRG 3122
             LL+KS G+  +N+E ++AL E K      +  +    ++E  K+ KE+   +R V +R 
Sbjct: 429  SLLYKSAGSGNNNDERLIALYEKKKGGGESSLGMVSVLLTEQLKRVKEVLATWREVDERV 488

Query: 3123 STLFFT 3128
            S L  T
Sbjct: 489  SKLCLT 494



>EAY08042.1 on XP_812309   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 827

 Score = 29.6 bits (65), Expect = 4.2,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 30/51 (58%)

Query: 2528 GGMEQELVALKPQLEVHAVEVEKLLKELEGDKKVLEEKKATVETEKVEVQK 2578
            GG+    VA +P     A   E++LK+ +G+ +VLEE  +  + +KV+V +
Sbjct: 114  GGVSFTGVASQPLTTKTANTPEEVLKKPKGETRVLEEGASKDQKKKVDVSR 164



>EAY08042.1 on XP_818480   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 926

 Score = 29.6 bits (65), Expect = 4.8,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 36/64 (56%), Gaps = 5/64 (7%)

Query: 2521 EETNSVVGGMEQELVALKPQLEVHAVEVEKLLKELEGDKKVLEEKKATVETEKVEVQKKA 2580
            E  ++V  G+  +++++K        + E++LK+ +   +VLEE  ++ E +KV+V +  
Sbjct: 112  ESPDTVFTGIASQILSMKKD-----NKPEEVLKDAKEKTQVLEEVTSSEEKKKVDVSRPT 166

Query: 2581 DVAE 2584
             V E
Sbjct: 167  TVVE 170



>EAY08042.1 on XP_001349513  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2858

 Score = 29.3 bits (64), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 3/63 (4%)

Query: 693 EALIRKWSEHIKNDVSKLSENI---VTAQTELAQLTENVDESLVAIKSIDEKGEKFQHDL 749
           +  I++W E    D +KL EN+   +  + +L  + + ++      K I +KGE+++   
Sbjct: 564 KVFIKRWLESFLKDYNKLKENLNPCINNENQLPCIKDCLENCDCVEKWIKKKGEEWKKIK 623

Query: 750 ERY 752
           ERY
Sbjct: 624 ERY 626



>EAY08042.1 on XP_001611736  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1365

 Score = 28.5 bits (62), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 15/56 (26%), Positives = 28/56 (50%)

Query: 749 LERYNQIQMLIGKPQTEIDGLQIFLTELKNKKTLYTTADSWSKQREKILKTFLKEL 804
           LE+  ++ + +G  Q  +D  +I LT ++         D+W++    +LK  L EL
Sbjct: 715 LEKIGEVVVQLGNAQERLDRGEIDLTGVRKALNNAVPVDNWTRPFRTVLKKVLDEL 770




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08055.1 hypothetical protein TVAG_463350 [Trichomonas
vaginalis G3]
         (399 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_813606   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           33   0.033
XP_809062   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   1.0  
XP_804625   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   4.4  
XP_804892   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   8.6  
XP_803953   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   9.5  

>EAY08055.1 on XP_813606   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 930

 Score = 33.1 bits (74), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 12/110 (10%)

Query: 231 TPEKKTTKPKSVKKSRKSSDGKDSKAVSKSPRNTTARNNSD--DLAKA--SKLKIP-QIP 285
           TPE+   KPK   +  +    KD K      R TTA   SD   LA A  SK+  P Q+ 
Sbjct: 134 TPEEVLKKPKGETRVLEEDASKDQKKKVDVSRPTTAVKGSDIYMLAGAYSSKVATPGQVG 193

Query: 286 KSKSTAKGLLLEKDESTKSPIPSALAPKKRVKSKESHSSEKS--ASEPDS 333
            S +T  GLLL      K  +    A  K++  K++ SS +    ++PDS
Sbjct: 194 ASDATQLGLLL-----VKGSVSGEDANNKKIDWKDTESSPQGLFGTQPDS 238



>EAY08055.1 on XP_809062   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 930

 Score = 28.1 bits (61), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 12/110 (10%)

Query: 231 TPEKKTTKPKSVKKSRKSSDGKDSKAVSKSPRNTTARNNSDDL----AKASKLKIP-QIP 285
           TPE+   KPK   +  +    +D K      R TTA   SD      A +SK+  P Q+ 
Sbjct: 134 TPEEVLKKPKGETRVLEEGASEDQKKKVDVSRPTTAVKGSDIYMLAGAYSSKVATPGQVG 193

Query: 286 KSKSTAKGLLLEKDESTKSPIPSALAPKKRVKSKESHSSEKS--ASEPDS 333
            S +T  GLLL      K  + S  A  K++  K + S  +    ++PDS
Sbjct: 194 ASDATQLGLLL-----VKGSVNSEDANNKKIDWKVTESPPQRLFGTQPDS 238



>EAY08055.1 on XP_804625   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1042

 Score = 26.2 bits (56), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 5/41 (12%)

Query: 258 SKSPRNTTARNNSDDLAKASKLKIP-----QIPKSKSTAKG 293
           SKS   TT+  N+DD+++    + P     ++P++  TA G
Sbjct: 934 SKSGAETTSAENTDDVSRTEGTEFPVENGEEVPQTVDTASG 974



>EAY08055.1 on XP_804892   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1046

 Score = 25.0 bits (53), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 6/49 (12%)

Query: 251 GKDSKAV-SKSPRNTTARNNSDDLAKASKLKIP-----QIPKSKSTAKG 293
           G DS    SKS   TT+  N+DD+++    + P     ++P++  TA G
Sbjct: 930 GSDSSLTPSKSDAETTSAENTDDVSRTEGDEFPVENGEEVPQTVDTASG 978



>EAY08055.1 on XP_803953   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1027

 Score = 25.0 bits (53), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 6/49 (12%)

Query: 251 GKDSKAV-SKSPRNTTARNNSDDLAKASKLKIP-----QIPKSKSTAKG 293
           G DS    SKS   TT+  N+DD+++    + P     ++P++  TA G
Sbjct: 927 GSDSSLTPSKSDAETTSAENTDDVSRTEGDEFPVENGEEVPQTVDTASG 975




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08056.1 hypothetical protein TVAG_463360 [Trichomonas
vaginalis G3]
         (222 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351877  PfEMP1  (Establishment)  [Plasmodium falciparum]         31   0.043
XP_817310   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.11 
XP_001609034  variant erythrocyte surface antigen-1, alpha subun...    27   0.73 
XP_001610568  variant erythrocyte surface antigen-1, alpha subun...    27   0.80 
XP_001611736  variant erythrocyte surface antigen-1, alpha subun...    26   1.9  
XP_001610567  variant erythrocyte surface antigen-1, alpha subun...    26   2.2  
XP_001351515  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   5.9  
XP_001351514  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   6.5  

>EAY08056.1 on XP_001351877  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2270

 Score = 31.2 bits (69), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 13/66 (19%)

Query: 146 LDELSKDVEKSKTNLNELKTQVEIEQASNIQIKRTMEQTEQKLVSFSESLGGAASSQVIN 205
           +DEL KD++    N  EL+            IK+ +E+ E+K  +  E+  G ASS   N
Sbjct: 729 IDELFKDIKDGYGNAKELEG-----------IKKLLEEEERK--NQVEAADGGASSGKDN 775

Query: 206 TTIEKL 211
           TTI+KL
Sbjct: 776 TTIDKL 781



>EAY08056.1 on XP_817310   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 904

 Score = 30.0 bits (66), Expect = 0.11,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 5/110 (4%)

Query: 98  DNLSDRKNKSQAKLDNIQKDIQVYQSKLSQTTKSLNSAQQMRDKLKSQLDELSKDVEKSK 157
           D   D K  S      ++ +  V+    +Q TK  NS   +  K  +  DE SK+++KS 
Sbjct: 85  DTTGDEKLGSLRVPSLVEVNGDVFAVAEAQCTKGENSFTGIASKFLTLTDEPSKELDKSN 144

Query: 158 TNLNELKTQVEIEQASNIQIKRTMEQTEQKLVSFSESLGGAASSQVINTT 207
                LKTQV +E ++N + K      E+     ++ + G+ + + ++ +
Sbjct: 145 -----LKTQVLVECSANKEGKCPAGNEEKCACRVADQVSGSPNEREVDVS 189



>EAY08056.1 on XP_001609034  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1313

 Score = 27.3 bits (59), Expect = 0.73,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 54/132 (40%), Gaps = 16/132 (12%)

Query: 87  KKSNHQTKLTFDNLSDRKNKSQAKLDNIQKDIQVYQSKLSQTTKS--------LNSAQQM 138
           K +  + K    N  ++KNK  A    +QK +++++  L  TTK         L++  ++
Sbjct: 751 KTALERAKEMVKNDGNKKNKLNAAHHGLQKVLKIFKKWLKDTTKGLDGHKGALLDATSKL 810

Query: 139 RDKLKSQLDELSKDVEKSKTNLNELKTQVEIEQASNIQIKRTMEQTEQKLVSFSES-LGG 197
           +D   S +     D         E KT     Q       + M+ T   L +F E  L G
Sbjct: 811 KDICSSPMCSACIDHATKCGRQGEKKTCPTCHQ-------QYMDGTPSPLQAFLEDRLPG 863

Query: 198 AASSQVINTTIE 209
            + S+V+N   E
Sbjct: 864 FSCSEVLNDEKE 875



>EAY08056.1 on XP_001610568  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1329

 Score = 27.3 bits (59), Expect = 0.80,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 39/74 (52%), Gaps = 1/74 (1%)

Query: 124 KLSQTTKSLNSAQQMRDKLKSQ-LDELSKDVEKSKTNLNELKTQVEIEQASNIQIKRTME 182
           K+ +    L +AQ+  +  K++ ++ + K +E +KT L + K ++E        +   + 
Sbjct: 678 KIGEVVVQLGNAQEALEGKKTEAIEGVKKKLEGAKTELGKAKGELETAVNGKDGLNGKLA 737

Query: 183 QTEQKLVSFSESLG 196
           + ++KLV+ ++  G
Sbjct: 738 EAKKKLVALTKGGG 751



>EAY08056.1 on XP_001611736  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1365

 Score = 26.2 bits (56), Expect = 1.9,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 39/95 (41%), Gaps = 1/95 (1%)

Query: 107 SQAKLDNIQKDIQVYQSKLSQTTKSLNSAQQMRDKLKSQLDELSKDVEKSKTNLNELKTQ 166
           +Q +LD  + D+   +  L+      N  +  R  LK  LDEL K   K           
Sbjct: 728 AQERLDRGEIDLTGVRKALNNAVPVDNWTRPFRTVLKKVLDELVKKKVKELGKAGGQTHD 787

Query: 167 VEIEQASNIQIKRTMEQTEQKLVSFSESLGGAASS 201
            +  QA N   K+ +E  ++K+ S    + G  ++
Sbjct: 788 GQTSQAIN-NAKKALETADKKIESGGAGVDGCKNA 821



>EAY08056.1 on XP_001610567  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1315

 Score = 25.8 bits (55), Expect = 2.2,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 39/85 (45%), Gaps = 1/85 (1%)

Query: 80  KLKQEIYKKSNHQTKLTFDNLSDRKNKSQAKLDNIQKDIQVYQSKLSQTTKS-LNSAQQM 138
           K+ +E   K N +  L    +         +L N Q+ ++  + +  +  K+ L  A++ 
Sbjct: 658 KVMRETLGKVNEEVALKVKEVLQAIGNVVVQLGNAQEALEGKKKEAIEGVKAKLQEAKEG 717

Query: 139 RDKLKSQLDELSKDVEKSKTNLNEL 163
            DK ++ L+E +K V     + NEL
Sbjct: 718 LDKARTALEEAAKKVNGDGLSGNEL 742



>EAY08056.1 on XP_001351515  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2181

 Score = 24.6 bits (52), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 11/23 (47%), Positives = 16/23 (69%)

Query: 130  KSLNSAQQMRDKLKSQLDELSKD 152
            K L   Q+ +DK K +LD+L+KD
Sbjct: 1249 KKLEEFQKQKDKYKGELDKLTKD 1271



>EAY08056.1 on XP_001351514  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2201

 Score = 24.6 bits (52), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 11/23 (47%), Positives = 16/23 (69%)

Query: 130  KSLNSAQQMRDKLKSQLDELSKD 152
            K L   Q+ +DK K +LD+L+KD
Sbjct: 1269 KKLEEFQKQKDKYKGELDKLTKD 1291




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08066.1 protein kinase, putative [Trichomonas
vaginalis G3]
         (336 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_818403   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.0  
XP_808639   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   7.9  

>EAY08066.1 on XP_818403   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 957

 Score = 26.9 bits (58), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 14/53 (26%), Positives = 26/53 (49%)

Query: 66  KQLDNKYIATFIELIEDAKTYHIVTELPEGMSLHDYITKNGPMPEKLVIEMIA 118
           K+ D K ++  I   +D K + +  E+P+G      + + G   +K +I M A
Sbjct: 285 KKEDKKTVSLIIHNSKDTKNWKLSKEVPDGGCGDPSVVEWGEKEDKKLIMMTA 337



>EAY08066.1 on XP_808639   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 949

 Score = 25.0 bits (53), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 9/29 (31%), Positives = 18/29 (62%)

Query: 67  QLDNKYIATFIELIEDAKTYHIVTELPEG 95
           Q D K ++  I  ++D K++ +  E+P+G
Sbjct: 266 QNDEKVVSLLIYTLKDTKSWKLSKEVPDG 294




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08067.1 hypothetical protein TVAG_463470 [Trichomonas
vaginalis G3]
         (442 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001608668  variant erythrocyte surface antigen-1, alpha subun...    29   0.48 
AAL38220  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   29   0.74 
AAL38221  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   29   0.76 
AAL38222  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   29   0.76 
XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 28   0.92 
AAL38219  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   28   1.2  
AAL38218  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   28   1.2  
XP_814809   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.2  

>EAY08067.1 on XP_001608668  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1337

 Score = 29.3 bits (64), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 61/150 (40%), Gaps = 20/150 (13%)

Query: 68  NGNIPLESSEIDSLNEKHKDYDQKIKFIREIINKLKRDINIYQFESENKDIYHARHAPLI 127
            GN  L+  +I S NEK +DY      I + IN + + +   Q         +       
Sbjct: 805 GGNGSLQ--QIGSANEKDRDYSSAKDQISDAINGINQTLEALQLLKRASTTLNGH----- 857

Query: 128 EKKSVNRPSLIFETPITNGFRVSVTPKNIVVTCQNNDGKYGIKFFENQNFTESKFIPLHT 187
            +  ++   +I+E  IT+   +  +PK    +C+++  K G +        +SK  P   
Sbjct: 858 -RDDISDVFMIYEKTITDLKEIYNSPK--CPSCESHSTKCGQQ-------PQSKTCPTCH 907

Query: 188 QQIRDLSSPILDA---DVVATVSTDCILNQ 214
           QQ  D +   L A   D +   S   ++NQ
Sbjct: 908 QQYMDGTPSPLQAFLEDRLPGFSCSAVVNQ 937



>EAY08067.1 on AAL38220  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2957

 Score = 28.9 bits (63), Expect = 0.74,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 7/48 (14%)

Query: 76  SEIDSLNEKHKD-------YDQKIKFIREIINKLKRDINIYQFESENK 116
           S+ID LNE H+        ++ +IK  +E + K  R+ N+Y ++ EN+
Sbjct: 222 SDIDILNEFHQGNIINDNYFNNEIKKKKEDVEKYIREYNLYIYKYENQ 269



>EAY08067.1 on AAL38221  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2965

 Score = 28.9 bits (63), Expect = 0.76,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 7/48 (14%)

Query: 76  SEIDSLNEKHKD-------YDQKIKFIREIINKLKRDINIYQFESENK 116
           S+ID LNE H+        ++ +IK  +E + K  R+ N+Y ++ EN+
Sbjct: 222 SDIDILNEFHQGNIINDNYFNNEIKKKKEDVEKYIREYNLYIYKYENQ 269



>EAY08067.1 on AAL38222  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2976

 Score = 28.9 bits (63), Expect = 0.76,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 7/48 (14%)

Query: 76  SEIDSLNEKHKD-------YDQKIKFIREIINKLKRDINIYQFESENK 116
           S+ID LNE H+        ++ +IK  +E + K  R+ N+Y ++ EN+
Sbjct: 222 SDIDILNEFHQGNIINDNYFNNEIKKKKEDVEKYIREYNLYIYKYENQ 269



>EAY08067.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 28.5 bits (62), Expect = 0.92,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 8/58 (13%)

Query: 71  IPLESSEIDSLNEKHKDYDQKIKFIREIINKLKRDINIYQF--------ESENKDIYH 120
           IP E   I  L ++  + +QK+  I + IN +  +INI Q          + NK++ H
Sbjct: 905 IPYEDKTISELEQEFNNNNQKLDNILQDINAMNLNINILQTLNIGINACNTNNKNVEH 962



>EAY08067.1 on AAL38219  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2969

 Score = 28.1 bits (61), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 7/48 (14%)

Query: 76  SEIDSLNEKHKD-------YDQKIKFIREIINKLKRDINIYQFESENK 116
           S+ID LNE H+        ++ +IK  +E + K  R+ N+Y ++ EN+
Sbjct: 222 SDIDILNEFHQGNIINDNYFNNEIKKKKEDMEKYIREYNLYIYKYENQ 269



>EAY08067.1 on AAL38218  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2977

 Score = 28.1 bits (61), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 7/48 (14%)

Query: 76  SEIDSLNEKHKD-------YDQKIKFIREIINKLKRDINIYQFESENK 116
           S+ID LNE H+        ++ +IK  +E + K  R+ N+Y ++ EN+
Sbjct: 222 SDIDILNEFHQGNIINDNYFNNEIKKKKEDMEKYIREYNLYIYKYENQ 269



>EAY08067.1 on XP_814809   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 239

 Score = 26.9 bits (58), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)

Query: 172 FENQNFTESKFIPLHTQQIRDLSSPILDADVVATVSTDCI 211
           F N  FT    + +H  Q+   S+P+L A++ A VST+ I
Sbjct: 116 FVNHRFTLVATVTIH--QVAKGSAPLLGANLDAPVSTNFI 153




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08068.1 hypothetical protein TVAG_463480 [Trichomonas
vaginalis G3]
         (412 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001349740  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   1.0  
XP_829794  VSG  (Establishment)  [Trypanosoma brucei]                  25   6.1  
XP_001350936  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   9.1  

>EAY08068.1 on XP_001349740  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3346

 Score = 28.5 bits (62), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)

Query: 370  ESLGI-APAPPLPTNIIDAAASPQD 393
            E+LGI    PP P  I+D   SPQ+
Sbjct: 1559 ENLGIKCECPPSPCTIVDGILSPQN 1583



>EAY08068.1 on XP_829794  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 476

 Score = 25.4 bits (54), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 16/72 (22%), Positives = 33/72 (45%)

Query: 101 SLIGTLLDSVSEDVTVSSTIGSNSTSGRRMKPKSRGLDNSISGSDAPRPLRPKKETQTAS 160
           + +G    +   ++ VSS   +   +G   +   +  D     SD P+ L+ + E    S
Sbjct: 215 ACVGAACSTAETNIKVSSAAATLFKAGELAQLAVKTTDAKPKRSDTPQGLKKELEKHQTS 274

Query: 161 IDDQSVDFIESK 172
           I+ +  DF+++K
Sbjct: 275 IEHRLYDFLKNK 286



>EAY08068.1 on XP_001350936  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2163

 Score = 25.0 bits (53), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 13/37 (35%), Positives = 20/37 (54%)

Query: 267 QEHKKLRRELKDAGIIDPNATTMTTYHDTVDTEDSFL 303
           +E K LR+ L+ AG+ DP A       D V  +D+ +
Sbjct: 707 KEIKHLRQMLQQAGVDDPAAFARPCTEDGVAEQDTIM 743




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08071.1 hypothetical protein TVAG_463510 [Trichomonas
vaginalis G3]
         (211 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351515  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   1.8  
XP_828103  VSG  (Establishment)  [Trypanosoma brucei]                  25   3.3  
XP_001609619  variant erythrocyte surface antigen-1, beta subuni...    25   6.1  

>EAY08071.1 on XP_001351515  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2181

 Score = 26.2 bits (56), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 12/32 (37%), Positives = 17/32 (53%)

Query: 43  CYHGAVDCFKFLRTKFNSKITQKCLEFSFLGG 74
           C    +DC K +R K+   I  +C + SFL G
Sbjct: 341 CSGNGLDCTKTIRAKYIYAIGSECTKCSFLCG 372



>EAY08071.1 on XP_828103  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 472

 Score = 25.0 bits (53), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 20/86 (23%), Positives = 38/86 (44%), Gaps = 6/86 (6%)

Query: 117 ELNYCTLYNNLESFLVYFDRTNDINRCFVFSITFNIQSLLEYLISLGANVNNYGASALHS 176
           EL+     + L+  L ++       +  V S+   I +L + L +LGA  +      + +
Sbjct: 355 ELSTINDLDELDKLLRHY------QQARVTSLNKEITNLKKQLKNLGAKADGKSPEQICN 408

Query: 177 AVTKNNTEAAEFLITHGVNINQKNSK 202
            + +N T+  E    H V+ N+K  K
Sbjct: 409 DIGENKTKCGETAGCHFVDTNEKGKK 434



>EAY08071.1 on XP_001609619  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 1086

 Score = 24.6 bits (52), Expect = 6.1,   Method: Composition-based stats.
 Identities = 11/24 (45%), Positives = 13/24 (54%)

Query: 33  FGYHELLELCCYHGAVDCFKFLRT 56
           FGY  + EL    G   C +FLRT
Sbjct: 967 FGYGNVTELHSTKGLKKCHEFLRT 990




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08090.1 hypothetical protein TVAG_497130 [Trichomonas
vaginalis G3]
         (280 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_845135  VSG  (Establishment)  [Trypanosoma brucei]                  28   0.48 

>EAY08090.1 on XP_845135  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 474

 Score = 28.5 bits (62), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 22/85 (25%)

Query: 84  GNTDADVEKLPVSIFSGLTPSLTITFD--QDVFSIVSASGGLEITGDISSEGQYLIYDIN 141
           G+TDA++ KL       + P L +  D  QD             T D+ +  + +   +N
Sbjct: 73  GSTDAELAKL-------VQPLLAVAIDVQQDA------------TTDLPTASKTISETLN 113

Query: 142 RGVLPKTLYEAVKKLGLTWYDGGLI 166
                K L+EA+KKL  T YDG +I
Sbjct: 114 ALTQRKALFEAIKKLSGT-YDGSII 137




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08093.1 hypothetical protein TVAG_497160 [Trichomonas
vaginalis G3]
         (492 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_805597   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           32   0.10 
XP_812811   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   0.54 

>EAY08093.1 on XP_805597   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 492

 Score = 31.6 bits (70), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 8/72 (11%)

Query: 219 PSNIQYKGGYLLVSGTVQRCSIAVSRLGNNSAYTMLFISQDTVSQQQRDLIRNIMGIIAE 278
           P+ +    G  +++GT  R ++AV R+G ++A   L + +  VS +Q        GI+ E
Sbjct: 184 PTTVVQGNGIYMLAGTYIRENVAVCRVGADAASWGLLLVKGNVSGEQD------KGIVWE 237

Query: 279 SVMGIFKPPTNI 290
              G+  P T+I
Sbjct: 238 DTDGL--PCTSI 247



>EAY08093.1 on XP_812811   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 814

 Score = 29.3 bits (64), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 8/72 (11%)

Query: 219 PSNIQYKGGYLLVSGTVQRCSIAVSRLGNNSAYTMLFISQDTVSQQQRDLIRNIMGIIAE 278
           P+ +    G  +++G   R ++AV R+G ++A   L + +  VS +Q +      GI+ E
Sbjct: 186 PTTVVKGNGIYMLAGKYIRENVAVCRVGADAASWGLLLVKGNVSGEQDN------GIVWE 239

Query: 279 SVMGIFKPPTNI 290
              G+  P T+I
Sbjct: 240 DTDGL--PCTSI 249




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08099.1 hypothetical protein TVAG_497230 [Trichomonas
vaginalis G3]
         (293 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_815119   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.0  
XP_807454   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   5.6  

>EAY08099.1 on XP_815119   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 380

 Score = 26.6 bits (57), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 2/40 (5%)

Query: 244 MERRINNLKSAGIDAEFLKIPGMSHGFGLGKGTNAEGWID 283
           ++RR N ++      E  +IPG  H  G  +G    GW D
Sbjct: 333 VQRRDNEIRQHLEAGE--RIPGGDHAVGRRQGLRVRGWCD 370



>EAY08099.1 on XP_807454   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 825

 Score = 25.0 bits (53), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 14/49 (28%), Positives = 22/49 (44%)

Query: 193 GSYGPQSFNGKPISRPGAIIMQYTGHTDFTRNDPPTFAVCGTNDGIANY 241
           GS G  SF    +   G +I  +       +N PPT +   ++D +A Y
Sbjct: 117 GSSGRDSFVSPSLVSAGGVIAAFAEGRINAKNTPPTESTKPSSDVVAEY 165




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08101.1 hypothetical protein TVAG_497250 [Trichomonas
vaginalis G3]
         (294 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_815119   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.3  
XP_001348153  MAEBL  (Adhesin)  [Plasmodium falciparum]                25   4.6  
XP_815514   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   8.0  
XP_808565   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   8.8  

>EAY08101.1 on XP_815119   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 380

 Score = 26.9 bits (58), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)

Query: 243 TLEKRINNLKALGIDAEFLRVPGAPHGFGLGKGTNAEGWID 283
           ++++R N ++      E  R+PG  H  G  +G    GW D
Sbjct: 332 SVQRRDNEIRQHLEAGE--RIPGGDHAVGRRQGLRVRGWCD 370



>EAY08101.1 on XP_001348153  MAEBL  (Adhesin)  [Plasmodium falciparum]
          Length = 2054

 Score = 25.4 bits (54), Expect = 4.6,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 13/25 (52%)

Query: 219 SDYTKNDPPTFAVMGTADPYFNYKT 243
           +DY    PP F +  T   YFNY T
Sbjct: 315 TDYMTKCPPRFPLNHTMFGYFNYST 339



>EAY08101.1 on XP_815514   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 811

 Score = 24.6 bits (52), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 6/67 (8%)

Query: 95  GLFYFPGKSDAPFAVISAGGAFQYVGSIHESIPLADYVSEQGLNAFALVYRTGSSEIACQ 154
           GLF   GK D+   +I +GG+  Y+       P+       G     ++Y   SS+IA  
Sbjct: 247 GLF---GKQDSLTGLIGSGGSGVYINDGTLVFPVEGTKKNNGKTVSLIIY---SSDIASW 300

Query: 155 DLAKALN 161
            L+K ++
Sbjct: 301 KLSKGMS 307



>EAY08101.1 on XP_808565   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 770

 Score = 24.6 bits (52), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 11/43 (25%), Positives = 20/43 (46%)

Query: 171 NVSTKGYSLWGGSAGAIMSAALGSYGTEAYYAKQIPRPGAVIM 213
           N+ TK         G   S +    G++++Y+  + RP  V+M
Sbjct: 142 NLKTKTLEECSSEGGKSHSQSTNCAGSKSFYSVHVSRPTTVVM 184




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08102.1 Dynein heavy chain family protein
[Trichomonas vaginalis G3]
         (4493 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_820186   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           35   0.11 
XP_810140   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           32   1.2  
XP_813237   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           32   1.4  
XP_808957   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   2.8  
XP_805038   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   3.5  
XP_809824   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   4.5  
XP_828105  VSG  (Establishment)  [Trypanosoma brucei]                  29   6.1  
XP_001349438  PfEMP1  (Establishment)  [Plasmodium falciparum]         29   6.6  
XP_001349740  PfEMP1  (Establishment)  [Plasmodium falciparum]         29   9.6  

>EAY08102.1 on XP_820186   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1133

 Score = 35.0 bits (79), Expect = 0.11,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 9/68 (13%)

Query: 830 PNTPVEIVEEAPKPVEEK--------PKKTEEGDEEGAAEDEDEEKPKVVEEKPL-PKVE 880
           P+TP E     PKP E K        PK  E    E  + +    +PK  E KP  PK  
Sbjct: 751 PSTPAEPKSAGPKPAEPKSAGPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSA 810

Query: 881 IPDTPETK 888
            P   E+K
Sbjct: 811 EPKPAESK 818




 Score = 30.8 bits (68), Expect = 2.4,   Method: Composition-based stats.
 Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 3/57 (5%)

Query: 833 PVEIVEEAPKPVEEKPKKTEEGDEEGAAEDEDEEKPKVVEEKPL-PKVEIPDTPETK 888
           P E     PKP E  PK  E    E  + +    +PK  E KP  PK   P   E+K
Sbjct: 834 PAESKSAEPKPAE--PKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAESK 888




 Score = 30.4 bits (67), Expect = 2.9,   Method: Composition-based stats.
 Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 3/57 (5%)

Query: 833 PVEIVEEAPKPVEEKPKKTEEGDEEGAAEDEDEEKPKVVEEKPL-PKVEIPDTPETK 888
           P E     PKP E  PK  E    E  + +    +PK  E KP  PK   P   E K
Sbjct: 814 PAESKSAEPKPAE--PKSAEPKPAESKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPK 868



>EAY08102.1 on XP_810140   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 923

 Score = 31.6 bits (70), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 3/46 (6%)

Query: 830 PNTPVEIVEEAPKPVE---EKPKKTEEGDEEGAAEDEDEEKPKVVE 872
           P+TP     E PKP E   E+PK  E   EE    + + E+PK  E
Sbjct: 749 PSTPAVSESEEPKPAESESEEPKPAESESEEPKPVESESEEPKPAE 794



>EAY08102.1 on XP_813237   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1496

 Score = 31.6 bits (70), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 4/60 (6%)

Query: 833  PVEIVEEAPKPVEEKPKKTEEGDEEGAAEDEDEEK---PKVVEEKPL-PKVEIPDTPETK 888
            PVE     PKP E KP + +  + + A     E K   PK  E KP  PK   P + E K
Sbjct: 1172 PVEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPK 1231




 Score = 30.4 bits (67), Expect = 2.7,   Method: Composition-based stats.
 Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 4/60 (6%)

Query: 833  PVEIVEEAPKPVEEKPKKTEEGDEEGAAEDEDEEK---PKVVEEKPL-PKVEIPDTPETK 888
            P E     PKP E KP + +  + + A     E K   PK VE KP  PK   P   E K
Sbjct: 1132 PAEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPVEPKPAEPKPAEPKPAEPK 1191




 Score = 30.4 bits (67), Expect = 3.3,   Method: Composition-based stats.
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 4/60 (6%)

Query: 833  PVEIVEEAPKPVEEKPKKTEEGDEEGAAEDEDEEK---PKVVEEKPL-PKVEIPDTPETK 888
            P E     PKP E KP + +  + + A     E K   PK  E KP+ PK   P   E K
Sbjct: 1077 PAEPKSAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPAEPKPVEPKPAEPKPAEPK 1136




 Score = 30.4 bits (67), Expect = 3.4,   Method: Composition-based stats.
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 4/60 (6%)

Query: 833  PVEIVEEAPKPVEEKPKKTEEGDEEGAAEDEDEEK---PKVVEEKPL-PKVEIPDTPETK 888
            P E     PKP E KP + +  + + A     E K   PK  E KP  PK   P + E K
Sbjct: 1237 PAEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKSAEPKPAEPKPAEPKSAEPK 1296




 Score = 30.0 bits (66), Expect = 3.9,   Method: Composition-based stats.
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 4/60 (6%)

Query: 833  PVEIVEEAPKPVEEKPKKTEEGDEEGAAEDEDEEK---PKVVEEKPL-PKVEIPDTPETK 888
            P E     PKP E KP + +  + + A     E K   PK  E KP+ PK   P   E K
Sbjct: 1022 PAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPVEPKAAEPKPAEPK 1081




 Score = 30.0 bits (66), Expect = 4.1,   Method: Composition-based stats.
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 4/60 (6%)

Query: 833 PVEIVEEAPKPVEEKPKKTEEGDEEGAAEDEDEEK---PKVVEEKPL-PKVEIPDTPETK 888
           P E     PKP E KP + +  + + A     E K   PK  E KP  PK   P + E K
Sbjct: 862 PAEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPK 921




 Score = 30.0 bits (66), Expect = 4.3,   Method: Composition-based stats.
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 4/60 (6%)

Query: 833  PVEIVEEAPKPVEEKPKKTEEGDEEGAAEDEDEEKP---KVVEEKPL-PKVEIPDTPETK 888
            P E     PKP E KP + +  + + A     E KP   K  E KP  PK   P + E K
Sbjct: 1222 PAEPKSAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKSAEPK 1281




 Score = 30.0 bits (66), Expect = 4.5,   Method: Composition-based stats.
 Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 4/60 (6%)

Query: 833  PVEIVEEAPKPVEEKPKKTEEGDEEGAAEDEDEEK---PKVVEEKPL-PKVEIPDTPETK 888
            P E     PKPVE KP + +  + + A     E K   PK  E KP  PK   P   E K
Sbjct: 1162 PAEPKPAEPKPVEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPAEPKPAEPK 1221




 Score = 29.6 bits (65), Expect = 5.1,   Method: Composition-based stats.
 Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 3/57 (5%)

Query: 833  PVEIVEEAPKPVEEKPKKTEEGDEEGAAEDEDEEKPKVVEEKPL-PKVEIPDTPETK 888
            P E     PKPVE KP + +  + + A     E KP   E KP  PK   P   E K
Sbjct: 1112 PAEPKPAEPKPVEPKPAEPKPAEPKPAEPKPAEPKP--AEPKPAEPKSAEPKPAEPK 1166




 Score = 29.6 bits (65), Expect = 5.2,   Method: Composition-based stats.
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 4/60 (6%)

Query: 833  PVEIVEEAPKPVEEKPKKTEEGDEEGAAEDEDEEKP---KVVEEKPL-PKVEIPDTPETK 888
            P E     PKP E KP + +  + + A     E KP   K  E KP  PK   P + E K
Sbjct: 1207 PAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPK 1266




 Score = 29.6 bits (65), Expect = 5.4,   Method: Composition-based stats.
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 4/60 (6%)

Query: 833  PVEIVEEAPKPVEEKPKKTEEGDEEGAAEDEDEEKP---KVVEEKPL-PKVEIPDTPETK 888
            P E     PKP E KP + +  + + A     E KP   K  E KP+ PK   P   E K
Sbjct: 1127 PAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPVEPKPAEPKPAEPK 1186




 Score = 29.3 bits (64), Expect = 6.0,   Method: Composition-based stats.
 Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 4/60 (6%)

Query: 833  PVEIVEEAPKPVEEKPKKTEEGDEEGAAEDEDEEKP---KVVEEKPL-PKVEIPDTPETK 888
            P E     PKP E KP + +  + + A     E KP   K  E KP  PK   P   E K
Sbjct: 1032 PAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPVEPKAAEPKPAEPKSAEPKPAEPK 1091




 Score = 29.3 bits (64), Expect = 6.4,   Method: Composition-based stats.
 Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 4/60 (6%)

Query: 833  PVEIVEEAPKPVEEKPKKTEEGDEEGAAEDEDEEK---PKVVEEKPL-PKVEIPDTPETK 888
            P E     PKP E KP + +  + + A     E K   PK  E KP  PK   P   E K
Sbjct: 1257 PAEPKSAEPKPAEPKPAEPKSAEPKPAEPKPAEPKSAEPKPAEPKPAEPKSAEPKPAEPK 1316




 Score = 29.3 bits (64), Expect = 6.4,   Method: Composition-based stats.
 Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 4/60 (6%)

Query: 833  PVEIVEEAPKPVEEKPKKTEEGDEEGAAEDEDEEKP---KVVEEKPL-PKVEIPDTPETK 888
            P E     PKP E KP + +  + + A     E KP   K  E KP  PK   P   E K
Sbjct: 1302 PAEPKSAEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEPKSAEPKPAEPKPAEPKPAEPK 1361




 Score = 29.3 bits (64), Expect = 6.4,   Method: Composition-based stats.
 Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 4/60 (6%)

Query: 833  PVEIVEEAPKPVEEKPKKTEEGDEEGAAEDEDEEKP---KVVEEKPL-PKVEIPDTPETK 888
            P E     PKP E KP + +  + + A     E KP   K  E KP  PK   P   E K
Sbjct: 1312 PAEPKPAEPKPAEPKPAEPKSAEPKPAEPKSAEPKPAEPKPAEPKPAEPKSAEPKPAEPK 1371




 Score = 29.3 bits (64), Expect = 6.8,   Method: Composition-based stats.
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 4/60 (6%)

Query: 833 PVEIVEEAPKPVEEKPKKTEEGDEEGAAEDEDEEK---PKVVEEKPL-PKVEIPDTPETK 888
           P E     PKP E KP + +  + + A     E K   PK  E KP  PK   P + E K
Sbjct: 727 PAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPK 786




 Score = 29.3 bits (64), Expect = 6.8,   Method: Composition-based stats.
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 4/60 (6%)

Query: 833 PVEIVEEAPKPVEEKPKKTEEGDEEGAAEDEDEEKP---KVVEEKPL-PKVEIPDTPETK 888
           P E     PKP E KP + +  + + A     E KP   K  E KP  PK   P + E K
Sbjct: 832 PAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPK 891




 Score = 29.3 bits (64), Expect = 6.9,   Method: Composition-based stats.
 Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 4/60 (6%)

Query: 833  PVEIVEEAPKPVEEKPKKTEEGDEEGAAEDEDEEK---PKVVEEKPL-PKVEIPDTPETK 888
            PVE     PKP E KP + +  + + A     E K   PK  E KP  PK   P   E K
Sbjct: 1122 PVEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPVEPKPAEPK 1181




 Score = 29.3 bits (64), Expect = 7.1,   Method: Composition-based stats.
 Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 3/57 (5%)

Query: 833  PVEIVEEAPKPVEEKPKKTEEGDEEGAAEDEDEEKPKVVEEKPL-PKVEIPDTPETK 888
            P E     PKPVE  PK  E    E  + +    +PK  E KP  PK   P   E K
Sbjct: 1057 PAEPKPAEPKPVE--PKAAEPKPAEPKSAEPKPAEPKPAEPKPAEPKSAEPKPAEPK 1111




 Score = 29.3 bits (64), Expect = 7.7,   Method: Composition-based stats.
 Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 4/60 (6%)

Query: 833  PVEIVEEAPKPVEEKPKKTEEGDEEGAAEDEDEEK---PKVVEEKPL-PKVEIPDTPETK 888
            P E     PKP E KP + +  + + A     E K   PK  E KP  PK   P   E K
Sbjct: 1272 PAEPKSAEPKPAEPKPAEPKSAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPAEPKPAEPK 1331




 Score = 28.9 bits (63), Expect = 8.0,   Method: Composition-based stats.
 Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 4/60 (6%)

Query: 833 PVEIVEEAPKPVEEKPKKTEEGDEEGAAEDEDEEK---PKVVEEKPL-PKVEIPDTPETK 888
           P E     PKP E KP + +  + + A     E K   PK  E KP  PK   P   E K
Sbjct: 757 PAEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPK 816




 Score = 28.9 bits (63), Expect = 8.0,   Method: Composition-based stats.
 Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 4/60 (6%)

Query: 833 PVEIVEEAPKPVEEKPKKTEEGDEEGAAEDEDEEK---PKVVEEKPL-PKVEIPDTPETK 888
           P E     PKP E KP + +  + + A     E K   PK  E KP  PK   P   E K
Sbjct: 892 PAEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPK 951




 Score = 28.9 bits (63), Expect = 8.0,   Method: Composition-based stats.
 Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 4/60 (6%)

Query: 833  PVEIVEEAPKPVEEKPKKTEEGDEEGAAEDEDEEK---PKVVEEKPL-PKVEIPDTPETK 888
            P E     PKP E KP + +  + + A     E K   PK  E KP  PK   P   E K
Sbjct: 1202 PAEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPK 1261




 Score = 28.9 bits (63), Expect = 8.3,   Method: Composition-based stats.
 Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 4/60 (6%)

Query: 833 PVEIVEEAPKPVEEKPKKTEEGDEEGAAEDEDEEKP---KVVEEKPL-PKVEIPDTPETK 888
           P E     PKP E KP + +  + + A     E KP   K  E KP  PK   P   E K
Sbjct: 867 PAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEPK 926




 Score = 28.9 bits (63), Expect = 8.3,   Method: Composition-based stats.
 Identities = 22/60 (36%), Positives = 24/60 (40%), Gaps = 4/60 (6%)

Query: 833  PVEIVEEAPKPVEEKP---KKTEEGDEEGAAEDEDEEKPKVVEEKPL-PKVEIPDTPETK 888
            P E     PKP E KP   K  E    E  A +    +PK  E KP  PK   P   E K
Sbjct: 1042 PAEPKPAEPKPAEPKPAEPKPAEPKPVEPKAAEPKPAEPKSAEPKPAEPKPAEPKPAEPK 1101




 Score = 28.9 bits (63), Expect = 8.3,   Method: Composition-based stats.
 Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 4/60 (6%)

Query: 833  PVEIVEEAPKPVEEKPKKTEEGDEEGAAEDEDEEKP---KVVEEKPL-PKVEIPDTPETK 888
            P E     PKP E KP + +  + + A     E KP   K  E KP  PK   P   E K
Sbjct: 1177 PAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEPK 1236




 Score = 28.9 bits (63), Expect = 8.3,   Method: Composition-based stats.
 Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 4/60 (6%)

Query: 833  PVEIVEEAPKPVEEKPKKTEEGDEEGAAEDEDEEK---PKVVEEKPL-PKVEIPDTPETK 888
            P E     PKP E KP + +  + + A     E K   PK  E KP  PK   P   E K
Sbjct: 1242 PAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKSAEPKPAEPKPAEPKSAEPKPAEPK 1301




 Score = 28.9 bits (63), Expect = 8.8,   Method: Composition-based stats.
 Identities = 22/60 (36%), Positives = 24/60 (40%), Gaps = 4/60 (6%)

Query: 833  PVEIVEEAPKPVEEK---PKKTEEGDEEGAAEDEDEEKPKVVEEKPL-PKVEIPDTPETK 888
            PVE     PKP E K   PK  E    E    +    +PK  E KP  PK   P   E K
Sbjct: 1067 PVEPKAAEPKPAEPKSAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPAEPKPVEPK 1126




 Score = 28.9 bits (63), Expect = 8.8,   Method: Composition-based stats.
 Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 3/57 (5%)

Query: 833  PVEIVEEAPKPVEEKPKKTEEGDEEGAAEDEDEEKPKVVEEKPL-PKVEIPDTPETK 888
            P E     PKP E KP + +  + + A     E KP   E KP  PK   P   E K
Sbjct: 1287 PAEPKSAEPKPAEPKPAEPKSAEPKPAEPKPAEPKP--AEPKPAEPKSAEPKPAEPK 1341




 Score = 28.9 bits (63), Expect = 8.9,   Method: Composition-based stats.
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 4/60 (6%)

Query: 833  PVEIVEEAPKPVEEKPKKTEEGDEEGAAEDEDEEK---PKVVEEKPL-PKVEIPDTPETK 888
            P E     PKP E KP + +  + + A     E K   PK  E KP  PK   P + E K
Sbjct: 1047 PAEPKPAEPKPAEPKPAEPKPVEPKAAEPKPAEPKSAEPKPAEPKPAEPKPAEPKSAEPK 1106



>EAY08102.1 on XP_808957   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1446

 Score = 30.4 bits (67), Expect = 2.8,   Method: Composition-based stats.
 Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 3/57 (5%)

Query: 833 PVEIVEEAPKPVEEKPKKTEEGDEEGAAEDEDEEKPKVVEEKPL-PKVEIPDTPETK 888
           P E     PKP E  PK  E    E  + + +  +PK  E KP  PK   P+  E K
Sbjct: 844 PAEPKSAEPKPAE--PKSAEPKPAEPKSAEPEPAEPKSAEPKPAEPKSAEPEPAEPK 898




 Score = 30.4 bits (67), Expect = 3.4,   Method: Composition-based stats.
 Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 3/57 (5%)

Query: 833  PVEIVEEAPKPVEEKPKKTEEGDEEGAAEDEDEEKPKVVEEKPL-PKVEIPDTPETK 888
            P E     PKP E  PK  E    E  + + +  +PK  E KP  PK   P+  E K
Sbjct: 1234 PTEPKSAEPKPAE--PKSAEPEPAEPKSAEPEPAEPKSAEPKPAEPKSAEPEPTEPK 1288




 Score = 29.6 bits (65), Expect = 5.1,   Method: Composition-based stats.
 Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 3/57 (5%)

Query: 833 PVEIVEEAPKPVEEKPKKTEEGDEEGAAEDEDEEKPKVVEEKPL-PKVEIPDTPETK 888
           P E     PKP E  PK  E    E  + + +  +PK  E KP  PK   P   E K
Sbjct: 804 PAEPKSAEPKPAE--PKSAEPKPAEPKSAEPEPAEPKSAEPKPAEPKSAEPKPAEPK 858




 Score = 29.6 bits (65), Expect = 5.1,   Method: Composition-based stats.
 Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 3/57 (5%)

Query: 833  PVEIVEEAPKPVEEKPKKTEEGDEEGAAEDEDEEKPKVVEEKPL-PKVEIPDTPETK 888
            P E     PKP E  PK  E    E  + +    +PK  E KP  PK   P+  E K
Sbjct: 974  PAEPKSAEPKPAE--PKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPEPAEPK 1028




 Score = 29.6 bits (65), Expect = 5.1,   Method: Composition-based stats.
 Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 3/57 (5%)

Query: 833  PVEIVEEAPKPVEEKPKKTEEGDEEGAAEDEDEEKPKVVEEKPL-PKVEIPDTPETK 888
            P E     PKP E  PK  E    E  + + +  +PK  E KP  PK   P   E K
Sbjct: 994  PAEPKSAEPKPAE--PKSAEPKPAEPKSAEPEPAEPKSAEPKPAEPKSAEPKPAEPK 1048



>EAY08102.1 on XP_805038   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 927

 Score = 30.0 bits (66), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 7/43 (16%)

Query: 830 PNTPVEIVEEAPKPVEEKPKKTEEGDEEGAAEDEDEEKPKVVE 872
           P TP E   E PKP E +P      +E   AE E EE PK  E
Sbjct: 751 PPTPAEPKSEEPKPAESRP------EEPKPAESESEE-PKPAE 786



>EAY08102.1 on XP_809824   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 364

 Score = 29.6 bits (65), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 7/43 (16%)

Query: 830 PNTPVEIVEEAPKPVEEKPKKTEEGDEEGAAEDEDEEKPKVVE 872
           P+TP E   E PKP E +P      +E   AE E EE PK  E
Sbjct: 188 PSTPAEPKSEEPKPAESRP------EEPKPAESESEE-PKPAE 223



>EAY08102.1 on XP_828105  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 508

 Score = 29.3 bits (64), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 47/116 (40%), Gaps = 17/116 (14%)

Query: 3759 ALLCFRILLADKQSGAIKPDEFMALLRNPR--NTEFQNPAPDWLTDASWTSICGLNSLDA 3816
            AL   +   A+  +GA +  EF A+    R  +T F N A DW  D  + SI  +N    
Sbjct: 14   ALTSVKTADANIDTGANRR-EFGAMCNVLRWTSTTFTNKADDWDDDKIYNSIADIN---- 68

Query: 3817 FKTIPQDITMRTKPWQKWCDQETPELD---KLPLDYKNKTEFQKLLVIRALRPDRM 3869
                   +T+  K W+    QE        KLP  +     FQK+  + A    R+
Sbjct: 69   -------MTLAEKEWRAMFLQEGQAEKWQLKLPTKHAENAAFQKMWALWACAAQRV 117



>EAY08102.1 on XP_001349438  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2265

 Score = 29.3 bits (64), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)

Query: 1253 GYKGACELIEKWDTEIDKQTDEFEEIKANGE 1283
            G K  CE +EKW   +DK++ E++EIK + E
Sbjct: 1554 GCKKKCECVEKW---LDKKSTEWDEIKKHYE 1581



>EAY08102.1 on XP_001349740  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3346

 Score = 28.9 bits (63), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 7/65 (10%)

Query: 975  YDNQATAFD--KVSVDPDITDIKEKILQCVESMSKKCIKYRDDNFSKY---SNVWTQSRE 1029
            YD+Q   FD  K        D  EK  Q  E + +KCIK   +   K    SN WT   +
Sbjct: 1497 YDSQKGKFDVEKTEKKQGYEDYSEK--QASEYLKEKCIKSSCNCMKKVTEISNYWTNPHK 1554

Query: 1030 TYITE 1034
            TY TE
Sbjct: 1555 TYDTE 1559




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08108.1 hypothetical protein TVAG_497320 [Trichomonas
vaginalis G3]
         (440 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 32   0.061
XP_001351515  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   1.1  
XP_001351514  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   1.3  
XP_001347690  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   1.3  
XP_821390   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   3.2  
XP_001350936  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   4.4  
XP_001350082  Rh2b  (Adhesin)  [Plasmodium falciparum]                 26   5.1  

>EAY08108.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 32.3 bits (72), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 97/143 (67%), Gaps = 26/143 (18%)

Query: 201  LQRQKELEQEKEQRILEEKQKEIELKKKQEIEENRRRELEEQRRKEEELKRQ------KE 254
            LQ+++EL++++++R+  EKQ++  L+K++E+    +R+ +E+ +KEE LKRQ      KE
Sbjct: 2747 LQKEEELKRQEQERLEREKQEQ--LQKEEEL----KRQEQERLQKEEALKRQEQERLQKE 2800

Query: 255  MELQRQ------REIEERRLKLEEERKRQKELELQRQREMEERKQREIERQKELERQMEL 308
             EL+RQ      RE +E +L+ EEE KRQ++  LQ++  ++ ++Q  +++++EL+RQ E 
Sbjct: 2801 EELKRQEQERLEREKQE-QLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQ-EQ 2858

Query: 309  QRLE------EERQKELKRQIES 325
            +RLE       ER++ +K ++ES
Sbjct: 2859 ERLERKKIELAEREQHIKSKLES 2881



>EAY08108.1 on XP_001351515  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2181

 Score = 28.1 bits (61), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 56/107 (52%), Gaps = 3/107 (2%)

Query: 180  IEEKKKLKKQIEMENRRKEFMLQRQKELEQEKEQRILEEKQKEIELKKKQEIEENRRREL 239
            +++   L+K     +  + F L  + ++E+++E   +E+++   ++     + E  + +L
Sbjct: 932  VKDDASLRKWFIESSAVETFFLWHEYKMEKKRED--IEKQKANEKVVDTSNVGEELQNDL 989

Query: 240  EEQRRKEEELKRQKEMELQRQREI-EERRLKLEEERKRQKELELQRQ 285
            E      EE KRQ    L   ++I E + +++ +E+ +QK  E++++
Sbjct: 990  EGNGTIPEEFKRQMFYTLGDYKDIFEGKSIEVGDEKDKQKMKEIEKK 1036



>EAY08108.1 on XP_001351514  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2201

 Score = 28.1 bits (61), Expect = 1.3,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 56/107 (52%), Gaps = 3/107 (2%)

Query: 180  IEEKKKLKKQIEMENRRKEFMLQRQKELEQEKEQRILEEKQKEIELKKKQEIEENRRREL 239
            +++   L+K     +  + F L  + ++E+++E   +E+++   ++     + E  + +L
Sbjct: 952  VKDDASLRKWFIESSAVETFFLWHEYKMEKKRED--IEKQKANEKVVDTSNVGEELQNDL 1009

Query: 240  EEQRRKEEELKRQKEMELQRQREI-EERRLKLEEERKRQKELELQRQ 285
            E      EE KRQ    L   ++I E + +++ +E+ +QK  E++++
Sbjct: 1010 EGNGTIPEEFKRQMFYTLGDYKDIFEGKSIEVGDEKDKQKMKEIEKK 1056



>EAY08108.1 on XP_001347690  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2215

 Score = 28.1 bits (61), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 2/84 (2%)

Query: 146 QKQRMEKQKEPKEEEIKPQKVYAKSVEKSEKQRRIEEKKKLKKQIEMENRRKEFMLQRQK 205
           QKQ  +KQK    EEIK  K  A     S     I EK   ++         EF+ +  +
Sbjct: 380 QKQEFDKQKNKYAEEIKKAK--ADEETSSRNINNIYEKDFYERLKTHYGSVNEFLKKLNE 437

Query: 206 ELEQEKEQRILEEKQKEIELKKKQ 229
           E   + E ++ EEK   ++  K +
Sbjct: 438 ERICKDEPKVKEEKADAVDFTKDE 461



>EAY08108.1 on XP_821390   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 940

 Score = 26.6 bits (57), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 11/78 (14%)

Query: 95  VEHVYRTKDSAVMADLQKKLQEEQARVIK-----QPVDDSWMEEAAAAN-KPKLSNKQKQ 148
           + H Y   D    AD   ++Q+    V       +P++D   +E +A N KP +S  +  
Sbjct: 676 ISHFYIGGDGGAKAD--SEVQDVSVTVTNVLLYNRPLND---DEISALNAKPSVSKAKDT 730

Query: 149 RMEKQKEPKEEEIKPQKV 166
           +  K+  P  E  KP  +
Sbjct: 731 KTVKEGTPSPEASKPATL 748



>EAY08108.1 on XP_001350936  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2163

 Score = 26.2 bits (56), Expect = 4.4,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 2/91 (2%)

Query: 144 NKQKQRMEKQKEPKEEEIKPQKVYAKSVEKSEKQRRIEE--KKKLKKQIEMENRRKEFML 201
           + QK   EKQKE   +EIK +      ++ + ++  I     K+  K+++ +    E  L
Sbjct: 395 DNQKLEFEKQKEKYTKEIKKKHPTTIIIKTANRKTTINNLYVKEFYKKLQEKYGDVENFL 454

Query: 202 QRQKELEQEKEQRILEEKQKEIELKKKQEIE 232
           Q+  E +  K Q   +E   +I  K  ++I+
Sbjct: 455 QKLNEEQICKNQPYNDESSIDINFKSIKDID 485



>EAY08108.1 on XP_001350082  Rh2b  (Adhesin)  [Plasmodium falciparum]
          Length = 1115

 Score = 26.2 bits (56), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 47/64 (73%), Gaps = 7/64 (10%)

Query: 236 RRELEEQRRKEEELKRQKEMELQRQREIEERRLKLEEERKRQKELELQRQR---EMEERK 292
           +R+ +E+ +KEEELKRQ++  L+R++   + +L+ EEE  R+KE E Q+QR   E+EE+K
Sbjct: 600 KRQEQERLQKEEELKRQEQERLEREK---QEQLQKEEEL-RKKEQEKQQQRNIQELEEQK 655

Query: 293 QREI 296
           + EI
Sbjct: 656 KPEI 659




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08115.1 hypothetical protein TVAG_497390 [Trichomonas
vaginalis G3]
         (510 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609667  variant erythrocyte surface antigen-1, alpha subun...    32   0.078
XP_846273  VSG  (Establishment)  [Trypanosoma brucei]                  31   0.16 
XP_806415   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   0.26 
XP_845140  VSG  (Establishment)  [Trypanosoma brucei]                  27   3.4  
AAL15426  MSA-2a2  (Invasion)  [Babesia bovis]                         25   8.5  

>EAY08115.1 on XP_001609667  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1303

 Score = 32.3 bits (72), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 46/230 (20%), Positives = 87/230 (37%), Gaps = 40/230 (17%)

Query: 64  QPKNDAETPKETPKNGEEKAAPLYWLSR-----------TRSEESTDPVDMRPDSEEWTS 112
           Q +N   T   TP+N +     LYWLS               +E  + V  +P   + T+
Sbjct: 442 QKRNSESTTHSTPRNPKTIREILYWLSALPYSEAYKEMLKHGKERLEKVLKKPGETDSTN 501

Query: 113 QELHL-FIVTDAGKPV-------YSRYGTVQKLSPILCTCVAILGHMESLHEELNHFRAG 164
            E  L FI TD   P+       ++ +  V +  P++     ++G    +H         
Sbjct: 502 GETQLKFIQTDRPAPITVDEFNLFAHFQAVTQYCPLV-----LIGIQGGIHSTDKTLEPA 556

Query: 165 SHTFVFLPKSPFVFIAVSKSSLPVSYLFKQLNFLYSLFLSLFSENLINQLSARPACD--F 222
            H+     +  F +  VS     +    + ++++ +LF  L+   L  Q + +  C   +
Sbjct: 557 IHSLYANTECQFTYPTVS-----IQAYNQVVHYIRALFYQLYF--LRKQCAVKVTCGGKW 609

Query: 223 RQIAEGTRPAWDGVVNNMSEDPAFIFAPSVPVSHMRPEQRAAVISHFDKL 272
           R+   G     DGV+    +  +++     P+ H R  +   V    D +
Sbjct: 610 RECRYG-----DGVLGK--DVVSWMCLGCDPMEHDRGSRVGKVKGVLDGV 652



>EAY08115.1 on XP_846273  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 490

 Score = 31.2 bits (69), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 1/68 (1%)

Query: 32  ESEQPNQENKIENTENTNTESQQNIESAKNTDQPKNDAETPKETPKNGEEKAAPLYWLSR 91
           E +Q     K+  T + N ++++  E  KN     +DAE  K  PK G E  AP    + 
Sbjct: 383 EKKQAKTTQKVSKTTDCNKQTEKTAEECKNLG-CDHDAENKKCKPKAGTENTAPGAGATA 441

Query: 92  TRSEESTD 99
             ++  TD
Sbjct: 442 GCTKHGTD 449



>EAY08115.1 on XP_806415   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 121

 Score = 28.9 bits (63), Expect = 0.26,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 5/47 (10%)

Query: 63  DQPKNDAETPKETPKNGEEKAAPLYWLSRTRSEESTDPVDMRPDSEE 109
           D PK D E P       EE+AA   W +  +++E+T P+    DSE+
Sbjct: 6   DIPKADVERPIY-----EEEAASPEWATERQTQETTAPLVENGDSED 47



>EAY08115.1 on XP_845140  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 533

 Score = 26.9 bits (58), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 6/45 (13%)

Query: 17  KPQEVQENTPETTNNESEQPNQENKIE------NTENTNTESQQN 55
           KP+ V+ENT ETT N++ +    N+          EN  T  +QN
Sbjct: 435 KPKPVKENTAETTGNQAGEAAATNRCTAHKDKLACENDKTGDKQN 479



>EAY08115.1 on AAL15426  MSA-2a2  (Invasion)  [Babesia bovis]
          Length = 281

 Score = 25.4 bits (54), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 5/56 (8%)

Query: 25  TPETTNNESEQPNQENKIENTENTNTESQQN-----IESAKNTDQPKNDAETPKET 75
           TP    +    P  +    NT   +T + Q+       S  + DQP   AETPK T
Sbjct: 204 TPSPIPSTQGTPGAQPAAPNTSQPDTPAAQSHPGPAAPSTTSADQPPKPAETPKPT 259




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08116.1 hypothetical protein TVAG_497400 [Trichomonas
vaginalis G3]
         (446 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_815749   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   6.3  

>EAY08116.1 on XP_815749   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1053

 Score = 25.8 bits (55), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 58/127 (45%), Gaps = 14/127 (11%)

Query: 248  LQQKVEQPIK----RSSSTPKQSNASQNPPPKETKKSDSNSEKTKSSDKKKVSLSEEASD 303
            LQQKVE   +    RS+ T   + A Q+      +  D NSE+T  SD    SL+   SD
Sbjct: 897  LQQKVELSNENNDVRSTGT-GNTGAEQS---LSLEAGDGNSERTMGSDS---SLTPSESD 949

Query: 304  ALFGDFGSKPAEKKSKSSANSSKIQKEKPQPVEQKSISEDVF-AENSIQQEKPA--PSKE 360
            A     G+     ++K +  SS+   E PQ VE    + +    E +I  E  A  PS  
Sbjct: 950  AETTSAGNTDDVFRTKGAEVSSENGNEVPQTVETAPGNTNTTPGETAIPSESNATTPSDT 1009

Query: 361  DVFVEDN 367
            ++ +E+ 
Sbjct: 1010 EILLENG 1016




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08124.1 acetyltransferase, GNAT family protein
[Trichomonas vaginalis G3]
         (154 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAX59907  TaSE  (Establishment)  [Theileria annulata]                  26   1.3  
XP_001349207  EBA-175  (Adhesin)  [Plasmodium falciparum]              23   8.2  
XP_821762   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   8.4  

>EAY08124.1 on AAX59907  TaSE  (Establishment)  [Theileria annulata]
          Length = 429

 Score = 25.8 bits (55), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 1/60 (1%)

Query: 24  DELSEPYGLFTY-RYFMAVCPQHCLLAHCNGQLVGAIIGRETKKDDGRVKGYIAMLVVLK 82
           DE ++ Y L  + + F+   PQH   A+C+   +  ++ +   + D  VK +   L + K
Sbjct: 225 DERTQIYLLSRFSKIFICARPQHLQQAYCSAVAIRVLLQKVWAQLDKSVKAFYTRLSMRK 284



>EAY08124.1 on XP_001349207  EBA-175  (Adhesin)  [Plasmodium falciparum]
          Length = 1462

 Score = 23.5 bits (49), Expect = 8.2,   Method: Composition-based stats.
 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)

Query: 2   SDITYRAY--KGEEEVQEVFKLIDDELSE 28
           +D+ +  Y  K E ++QEVFK    E+SE
Sbjct: 249 NDMDFGGYSTKAENKIQEVFKGAHGEISE 277



>EAY08124.1 on XP_821762   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 811

 Score = 23.5 bits (49), Expect = 8.4,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 19/40 (47%)

Query: 48  LAHCNGQLVGAIIGRETKKDDGRVKGYIAMLVVLKEHRKK 87
           L   NG++      +  K+D+GR  G  + L+ L   + K
Sbjct: 100 LVEVNGEVFAVAEAKCEKQDEGRFTGIASKLLTLTGEQAK 139




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08127.1 Glycosyl hydrolase family 20, catalytic
domain containing protein [Trichomonas vaginalis G3]
         (370 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_818477   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.6  
XP_820773   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.7  
XP_816177   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.7  
XP_806431   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   4.2  
XP_001347692  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   5.0  

>EAY08127.1 on XP_818477   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 869

 Score = 27.3 bits (59), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 6/40 (15%)

Query: 25  EVSTSSVVIKSGSARGLFYGLQIIIQLYHMSKGSGEIPCL 64
           +V+ SS++ KSG+ +      + +I LY   KG GE P L
Sbjct: 410 DVAASSLLYKSGNNK------EELIALYEKKKGGGETPSL 443



>EAY08127.1 on XP_820773   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 779

 Score = 27.3 bits (59), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 7/40 (17%)

Query: 25  EVSTSSVVIKSGSARGLFYGLQIIIQLYHMSKGSGEIPCL 64
           EV+ SS++ KSG       G   +I LY   KG GE P L
Sbjct: 425 EVAASSLLYKSG-------GNNELIALYEKKKGEGEKPSL 457



>EAY08127.1 on XP_816177   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 779

 Score = 27.3 bits (59), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 7/40 (17%)

Query: 25  EVSTSSVVIKSGSARGLFYGLQIIIQLYHMSKGSGEIPCL 64
           EV+ SS++ KSG       G   +I LY   KG GE P L
Sbjct: 425 EVAASSLLYKSG-------GNNELIALYEKKKGEGEKPSL 457



>EAY08127.1 on XP_806431   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 872

 Score = 26.2 bits (56), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)

Query: 25  EVSTSSVVIKSGSARGLFYGLQIIIQLYHMSKGSGEIP 62
           +V+ SS++ KSG +     G + +I LY   KG G+ P
Sbjct: 468 DVAASSLLYKSGKSE--TNGKEELIALYEKKKGGGDTP 503



>EAY08127.1 on XP_001347692  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2994

 Score = 25.8 bits (55), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 14/96 (14%)

Query: 150  YSDEGTIGAYGGYYTQEDMREVVKYAADRYITIIPEIEMPGHSEEVLYAYPEFSCSGQPY 209
            Y D   I +    Y + D+ E+  Y + +Y T+I  +  P  S               P 
Sbjct: 2629 YEDTTDITSSESEYEELDINEIYPYQSPKYKTLIEVVLEPSKSN-----------GNTPS 2677

Query: 210  KNSDFCVGNE---GTFEFLENILSEVFDIFPSQYIH 242
            K     +G++    T  F +   SE+   F SQYI 
Sbjct: 2678 KGDGNTLGDDMVPTTNTFTDEEWSELKHDFISQYIQ 2713




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08130.1 hypothetical protein TVAG_302170 [Trichomonas
vaginalis G3]
         (322 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_807358   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.17 

>EAY08130.1 on XP_807358   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 872

 Score = 30.0 bits (66), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 14/79 (17%)

Query: 237 GKLFKVANSL-----IIISCYYDSY-TFSGNSPTVQETTSKFINALSHLSTA--NCIAVI 288
           G +F VA +      +I SC    + T  G +PT  ETT      L   STA   C    
Sbjct: 169 GDVFAVAEAQCRSNGVIFSCIASQFMTLDGKNPTALETTRVKTEVLEECSTAEGEC---- 224

Query: 289 PFISQNEKHLETEERGSLH 307
              SQ+EK  ++  R  +H
Sbjct: 225 --QSQSEKRTDSRSRTRVH 241




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08131.1 hypothetical protein TVAG_302180 [Trichomonas
vaginalis G3]
         (298 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08138.1 hypothetical protein TVAG_302250 [Trichomonas
vaginalis G3]
         (498 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_818470   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   0.65 
AAB68609  AP51-1  (Adhesin)  [Trichomonas vaginalis]                   28   1.4  
XP_001347691  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   2.8  
XP_001352170  MSP1  (Invasion)  [Plasmodium falciparum]                27   3.2  
XP_817820   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   4.2  

>EAY08138.1 on XP_818470   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 868

 Score = 29.3 bits (64), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 10/51 (19%)

Query: 376 PNRPEIPSKYRPIGQPV-------LIGGSMGTASYILLGTDGAMEKTFGST 419
           PN+P IPS   P+  P+         GGS  T    L+G+ GA  +T G T
Sbjct: 737 PNKPPIPS---PVNTPIAGTAIQSTPGGSHQTKQESLMGSSGANGETAGRT 784



>EAY08138.1 on AAB68609  AP51-1  (Adhesin)  [Trichomonas vaginalis]
          Length = 255

 Score = 27.7 bits (60), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 30/128 (23%), Positives = 57/128 (44%), Gaps = 5/128 (3%)

Query: 238 AAQILNLKKDQIVIMIHCGSRNIGKRLATEYINQM-IEENPDEVAKLPDSQLVSSAASSK 296
           A + +NL    I   ++CG R  G  L T + + +   ++ DE AK+    L     + +
Sbjct: 39  AFRKMNLPAAVIKAQVYCGGRGKGHWLETGFKSGVHFVKSADEAAKIAKEMLGHHLVTKQ 98

Query: 297 TGAAYISAMACA-ANFAWCNRQIITHFVRESFKK---VLGRNDLKVDLLYDVAHNIAKIE 352
           TG   +   A   ++     R++    + +   +   V+   +  V++    AH+  KI 
Sbjct: 99  TGKDGLLCQAVMLSDPVEVKRELYFAILLDRQTQSPVVIASTEGGVEIEEVAAHHPEKIH 158

Query: 353 KHIVDGVE 360
           K ++DGVE
Sbjct: 159 KFVLDGVE 166



>EAY08138.1 on XP_001347691  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2182

 Score = 27.3 bits (59), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 31/84 (36%), Gaps = 7/84 (8%)

Query: 344 VAHNIAKIEKHIVDGVEKEFIVHR-------KGATRSFGPNRPEIPSKYRPIGQPVLIGG 396
             H +  I K + D VEKE   +R       K AT S  P+  E PS    +        
Sbjct: 19  AKHLLDSIGKIVHDQVEKEAADYRSSLQGRLKDATYSKKPDNQEKPSDPCELKHEYRTNA 78

Query: 397 SMGTASYILLGTDGAMEKTFGSTC 420
           + GT+     G +     T G  C
Sbjct: 79  TNGTSYPCRAGKEERFSDTLGGQC 102



>EAY08138.1 on XP_001352170  MSP1  (Invasion)  [Plasmodium falciparum]
          Length = 1720

 Score = 26.9 bits (58), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 12/33 (36%), Positives = 21/33 (63%)

Query: 444 ELEEKGVKYRAAGNKTLLEEAPEVYKDIDEVID 476
           +LEEK + +    NK LLE+  +  KD +E+++
Sbjct: 482 DLEEKNINHTKEQNKKLLEDYEKSKKDYEELLE 514



>EAY08138.1 on XP_817820   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 896

 Score = 26.6 bits (57), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 10/51 (19%)

Query: 376 PNRPEIPSKYRPIGQPV-------LIGGSMGTASYILLGTDGAMEKTFGST 419
           PN+  IPS   P+  P+         GGS  T    L+G+ GA  +T G T
Sbjct: 792 PNKAPIPS---PVNTPIAGTAIQSTPGGSQQTKQESLMGSSGANGETAGRT 839




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08144.1 hypothetical protein TVAG_302310 [Trichomonas
vaginalis G3]
         (1019 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_806427   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   3.7  
XP_813615   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   3.7  
XP_001609040  variant erythrocyte surface antigen-1, alpha subun...    28   3.8  
XP_804330   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   9.7  

>EAY08144.1 on XP_806427   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 886

 Score = 27.7 bits (60), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 9/91 (9%)

Query: 688 ETTMDDYRKLLAKSE----EKDENLIRLQAMN----KTFELKLKAMDEKRMSETNSLQMQ 739
           E+  DD   LL K E    EK    I  ++ N     TF  + K++     S  + ++M+
Sbjct: 190 ESGKDDCGFLLVKGEVNGNEKSVKTIHWKSYNDVSRPTFGEQHKSLTRLIGSGGSGVEMK 249

Query: 740 MQTQLDSVIAQSRAKITQKEEENLALIVTYS 770
             T +  V A ++A+  +KEE+ ++LI+ YS
Sbjct: 250 DDTLVFPVEAVNKAEGVEKEEKTVSLII-YS 279



>EAY08144.1 on XP_813615   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 706

 Score = 27.7 bits (60), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 5/74 (6%)

Query: 832 AVNDLFAEKEKLKQQHESDSLEIQKMTEKFDETIKERKQTLVQIEALREWDNWARRLHRI 891
           A + +  + +KL   HE +S E+  +   F   + E +   +    L+ W NW   L RI
Sbjct: 366 AYSSVLYKDDKLYCLHEINSNEVYSLV--FARLVGELR---IIKSVLQSWKNWDSHLSRI 420

Query: 892 VCERSCTTYSSEKL 905
                  T SSE++
Sbjct: 421 CTPADPATSSSERV 434



>EAY08144.1 on XP_001609040  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1335

 Score = 27.7 bits (60), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 44/194 (22%), Positives = 83/194 (42%), Gaps = 21/194 (10%)

Query: 544 NAKEMKQEMEERMNELQNDFANKQKSMDEVISKYKAQNE---ESINQLKSATAQLEDLRH 600
               M+   + R+ +++ +     K  D ++   KA  E   + + QL +A   LE    
Sbjct: 624 GCSPMEHYRKWRVEKVKGETLKMMKESDPIVKNLKALLEAIGQVVVQLGNAQEALEG--- 680

Query: 601 ENTQKTEEISQLKENSTEINDQLREAKDLIQQMK------IERRELKQHVDMLETANRKS 654
              +  E I ++KE  TE    L +AK+ + Q+K       E +E K  +  L    + +
Sbjct: 681 ---KDKEAIKKVKEKLTEAKGALGKAKEGLDQVKDGLNGQAELKEAKGKLGELTNGGKGA 737

Query: 655 IDRLKEKS---QSLRHEYEKAVQETQAELASARIELETTMDDYRKLLAKSEEKDENLIRL 711
           +  L +      SL+   +   QE + + +SA+  +   +D   K+L   +E  E  I+ 
Sbjct: 738 LHILVDSGNTPGSLQQIVDSG-QEWRKDYSSAKDRISEAIDGLHKVLEILKEGVEKQIKE 796

Query: 712 QA--MNKTFELKLK 723
           +A    KT ++  K
Sbjct: 797 EAKEAKKTLDVFFK 810



>EAY08144.1 on XP_804330   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 910

 Score = 26.6 bits (57), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 3/67 (4%)

Query: 140 KNNLQKSLDTLSDMYQDQISEVTSLAQQRTQLLKIIQKQKLLNE---GFENEAKSVNAKS 196
           KN+  + LDT+S  Y     E  S  +    +  +    + LNE   G  N +K      
Sbjct: 636 KNSFNEGLDTVSHFYFGAYDEQLSSGKIHATVANVFLYNRPLNETEIGALNASKVTIPPP 695

Query: 197 QVKQVPA 203
           + K VPA
Sbjct: 696 ERKPVPA 702




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08150.1 hypothetical protein TVAG_302370 [Trichomonas
vaginalis G3]
         (230 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001608668  variant erythrocyte surface antigen-1, alpha subun...    30   0.080

>EAY08150.1 on XP_001608668  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1337

 Score = 30.4 bits (67), Expect = 0.080,   Method: Composition-based stats.
 Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 12/102 (11%)

Query: 91  DKADRNYVDSKIKDVEEDVYIALKQKVEEIYLPVQDRIDQMRNNADAIHQYFTQTSLTIR 150
           ++ DR+Y  S  KD   D    + Q +E + L ++     +  + D I   F    +   
Sbjct: 817 NEKDRDY--SSAKDQISDAINGINQTLEALQL-LKRASTTLNGHRDDISDVF----MIYE 869

Query: 151 KELTALRKKYEQKDEPEAPKIHPISSPPQHFQKPRSKTEPTC 192
           K +T L++ Y   + P+ P     S+  +  Q+P+SKT PTC
Sbjct: 870 KTITDLKEIY---NSPKCPSCESHST--KCGQQPQSKTCPTC 906




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08154.1 hypothetical protein TVAG_302410 [Trichomonas
vaginalis G3]
         (292 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_818396   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.23 
XP_829780  VSG  (Establishment)  [Trypanosoma brucei]                  25   6.2  
XP_001351877  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   9.4  

>EAY08154.1 on XP_818396   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1044

 Score = 29.6 bits (65), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 13/23 (56%), Positives = 15/23 (65%), Gaps = 1/23 (4%)

Query: 125 VNPLFFGEVDPSLF-KLLHQNCE 146
           V P+F G  DPSLF  LLH+  E
Sbjct: 383 VGPIFAGSFDPSLFITLLHKKGE 405



>EAY08154.1 on XP_829780  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 494

 Score = 25.0 bits (53), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 4/84 (4%)

Query: 153 QGLLRHQKDGKVYLKAPENIPAVLDGIDILKVDAGEATALTGIKDDTRKACLQLLSYGPR 212
           QG    ++   V+L A  N+ AV        + +  AT  TG+K   + A +   +    
Sbjct: 284 QGTSTEERAKAVFLSAICNLAAVA----TESIGSALATTTTGLKSGAQAATIVKAAMQGA 339

Query: 213 WVICTQSDYVELHTKESVISSKFG 236
            ++ + ++ V+    E  ISS FG
Sbjct: 340 GLLSSDANNVDKAALEKFISSTFG 363



>EAY08154.1 on XP_001351877  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2270

 Score = 24.6 bits (52), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 6/28 (21%)

Query: 190 TALTGIKDDTRKACLQLLSYG----PRW 213
           +ALTG  DD  KAC Q   YG    P W
Sbjct: 880 SALTG--DDLTKACQQKYQYGKEKFPNW 905




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08156.1 hypothetical protein TVAG_302430 [Trichomonas
vaginalis G3]
         (125 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001350935  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   1.6  
XP_805884   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   2.2  
XP_819341   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   3.7  
XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 23   4.6  
XP_815845   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   5.3  
XP_808840   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   8.1  

>EAY08156.1 on XP_001350935  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2268

 Score = 25.0 bits (53), Expect = 1.6,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 3/39 (7%)

Query: 89  LFHGTIKENVLYGVFDEKTDE---EIMDVLEQANAKKFF 124
           LFHG  +E+    V DEK  E   EI   L + +A+ ++
Sbjct: 205 LFHGNPQESAQRKVLDEKLKEIFKEIHSGLTKKDAQTYY 243



>EAY08156.1 on XP_805884   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 438

 Score = 24.6 bits (52), Expect = 2.2,   Method: Composition-based stats.
 Identities = 7/27 (25%), Positives = 16/27 (59%)

Query: 25  FQIKSGQSVAFVDHSGSGKSTIVQLIE 51
           + +++G  + F D  GSG  +++  +E
Sbjct: 183 YDLRNGAIIRFADERGSGLESVIHFLE 209



>EAY08156.1 on XP_819341   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 888

 Score = 23.9 bits (50), Expect = 3.7,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 22/44 (50%)

Query: 25  FQIKSGQSVAFVDHSGSGKSTIVQLIERFYDITEGSITIDGQNI 68
           +Q+  G   +    SG  K T  Q++    + T+GS+ +DG  +
Sbjct: 635 WQVLCGDGTSTELSSGWEKETQYQVVLMLRNGTQGSVYVDGHRV 678



>EAY08156.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 23.5 bits (49), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 11/34 (32%), Positives = 20/34 (58%)

Query: 23  VSFQIKSGQSVAFVDHSGSGKSTIVQLIERFYDI 56
           V  QIK  +    +D++ S   T++ +++ FYDI
Sbjct: 498 VKLQIKINEKSNELDNAISQVKTLIIIMKSFYDI 531



>EAY08156.1 on XP_815845   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 936

 Score = 23.5 bits (49), Expect = 5.3,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 1/33 (3%)

Query: 37  DHSGS-GKSTIVQLIERFYDITEGSITIDGQNI 68
           +HS +  K T  Q++    + T+GS+ +DGQ +
Sbjct: 637 EHSNTWEKDTTHQVVLMLQNGTQGSVYVDGQRV 669



>EAY08156.1 on XP_808840   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 821

 Score = 22.7 bits (47), Expect = 8.1,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)

Query: 21  NDVSFQIKSGQSVAFVDHSGSGK-STIVQLIERFYDITEGSITIDGQNIKD 70
           N   +Q++ G      +HS S K  T  Q+     + T+G+  +DGQ + D
Sbjct: 619 NKNKWQLRCGDGKT-TEHSSSWKPETTHQVAIVLQNSTQGTAYVDGQRVGD 668




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08160.1 hypothetical protein TVAG_302470 [Trichomonas
vaginalis G3]
         (666 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_829761  VSG  (Establishment)  [Trypanosoma brucei]                  28   2.4  
ABA06463  MSA-2c  (Invasion)  [Babesia bovis]                          26   8.7  
ABA06475  MSA-2a1  (Invasion)  [Babesia bovis]                         26   8.7  
ABA06458  MSA-2c  (Invasion)  [Babesia bovis]                          25   9.2  
ABA06471  MSA-2a1  (Invasion)  [Babesia bovis]                         25   9.2  
ABA06459  MSA-2c  (Invasion)  [Babesia bovis]                          25   9.3  
ABA06472  MSA-2a2  (Invasion)  [Babesia bovis]                         25   9.3  

>EAY08160.1 on XP_829761  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 477

 Score = 27.7 bits (60), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 12/21 (57%), Positives = 18/21 (85%)

Query: 159 KDEEISKLQKEINDLQEQTKK 179
           KD+++ KLQK++ +LQE TKK
Sbjct: 375 KDQQLEKLQKQLTELQETTKK 395



>EAY08160.1 on ABA06463  MSA-2c  (Invasion)  [Babesia bovis]
          Length = 265

 Score = 25.8 bits (55), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 2/66 (3%)

Query: 287 ADSVKMKNDFDNSMSKQIQNQVKQSSQQMQMFKDQIANLTQENADLSTKIMNANSEVASL 346
            +SVK  N+ D+ + K   + +     Q +  KD++ NL +     S  + NA+ E+   
Sbjct: 140 GESVKHSNNLDSELRKYYWDNIYD--DQSEYNKDKLINLYKAFITDSGALRNASEELTKF 197

Query: 347 STSKAQ 352
            T KAQ
Sbjct: 198 ETKKAQ 203



>EAY08160.1 on ABA06475  MSA-2a1  (Invasion)  [Babesia bovis]
          Length = 265

 Score = 25.8 bits (55), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 2/66 (3%)

Query: 287 ADSVKMKNDFDNSMSKQIQNQVKQSSQQMQMFKDQIANLTQENADLSTKIMNANSEVASL 346
            +SVK  N+ D+ + K   + +     Q +  KD++ NL +     S  + NA+ E+   
Sbjct: 140 GESVKHSNNLDSELRKYYWDNIYD--DQSEYNKDKLINLYKAFITDSGALRNASEELTKF 197

Query: 347 STSKAQ 352
            T KAQ
Sbjct: 198 ETKKAQ 203



>EAY08160.1 on ABA06458  MSA-2c  (Invasion)  [Babesia bovis]
          Length = 265

 Score = 25.4 bits (54), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 2/66 (3%)

Query: 287 ADSVKMKNDFDNSMSKQIQNQVKQSSQQMQMFKDQIANLTQENADLSTKIMNANSEVASL 346
            +SVK  N+ D+ + K   + +     +    KD++ NL +     S  + NA+ E+   
Sbjct: 140 GESVKHSNNLDSELRKYYWDNIYDDQSEYN--KDKLINLYKAFITDSGALRNASEELTKF 197

Query: 347 STSKAQ 352
            T KAQ
Sbjct: 198 ETKKAQ 203



>EAY08160.1 on ABA06471  MSA-2a1  (Invasion)  [Babesia bovis]
          Length = 265

 Score = 25.4 bits (54), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 2/66 (3%)

Query: 287 ADSVKMKNDFDNSMSKQIQNQVKQSSQQMQMFKDQIANLTQENADLSTKIMNANSEVASL 346
            +SVK  N+ D+ + K   + +     +    KD++ NL +     S  + NA+ E+   
Sbjct: 140 GESVKHSNNLDSELRKYYWDNIYDDQSEYN--KDKLINLYKAFITDSGALRNASEELTKF 197

Query: 347 STSKAQ 352
            T KAQ
Sbjct: 198 ETKKAQ 203



>EAY08160.1 on ABA06459  MSA-2c  (Invasion)  [Babesia bovis]
          Length = 265

 Score = 25.4 bits (54), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 2/66 (3%)

Query: 287 ADSVKMKNDFDNSMSKQIQNQVKQSSQQMQMFKDQIANLTQENADLSTKIMNANSEVASL 346
            +SVK  N+ D+ + K   + +     Q +  KD++ NL +     S  + NA+ E+   
Sbjct: 140 GESVKHSNNLDSELRKYYWDNIYD--DQSEYNKDKLINLYKAFITDSGALRNASEELTKF 197

Query: 347 STSKAQ 352
            T KAQ
Sbjct: 198 ETKKAQ 203



>EAY08160.1 on ABA06472  MSA-2a2  (Invasion)  [Babesia bovis]
          Length = 265

 Score = 25.4 bits (54), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 2/66 (3%)

Query: 287 ADSVKMKNDFDNSMSKQIQNQVKQSSQQMQMFKDQIANLTQENADLSTKIMNANSEVASL 346
            +SVK  N+ D+ + K   + +     Q +  KD++ NL +     S  + NA+ E+   
Sbjct: 140 GESVKHSNNLDSELRKYYWDNIYD--DQSEYNKDKLINLYKAFITDSGALRNASEELTKF 197

Query: 347 STSKAQ 352
            T KAQ
Sbjct: 198 ETKKAQ 203




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08166.1 ADP-ribosylation factor family protein
[Trichomonas vaginalis G3]
         (192 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAB86482  RabA  (Invasion)  [Entamoeba histolytica]                    35   9e-04
BAD34969  Rab7B  (Establishment)  [Entamoeba histolytica]              25   3.9  

>EAY08166.1 on AAB86482  RabA  (Invasion)  [Entamoeba histolytica]
          Length = 219

 Score = 35.4 bits (80), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 28/122 (22%), Positives = 58/122 (47%), Gaps = 6/122 (4%)

Query: 23  IVGPPGSGKTTLLHMVKTGRFI-TFESTKSY--CKETLSFEQS--NVTFIDLGDSYKGFE 77
           ++G  G GKT L+     G +   +++T     C ++++ +     +   D     K   
Sbjct: 30  LIGDVGVGKTALIQRFCFGTYTEDYDATIGIETCDKSVNLDGKMYQLQLWDTAGQEKYHS 89

Query: 78  SLEEFSQNVSGIVLVVDASDSDSVNNAKKYLDSIYNLQVYKTKNIPVLIFGNKQDVVGCI 137
            +  + +++ G++LV      +S ++ K +LD  Y+  +      PVL+ GNK D++G  
Sbjct: 90  LVRLYFKDIKGVLLVFQIDRQESFDHCKDWLDLFYS-SISSGFTPPVLLVGNKCDLIGSS 148

Query: 138 SR 139
           +R
Sbjct: 149 TR 150



>EAY08166.1 on BAD34969  Rab7B  (Establishment)  [Entamoeba histolytica]
          Length = 207

 Score = 24.6 bits (52), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 11/23 (47%), Positives = 16/23 (69%)

Query: 21 ILIVGPPGSGKTTLLHMVKTGRF 43
          I+I+G  G GKT+LL+   T +F
Sbjct: 13 IIILGDSGVGKTSLLNQYVTKQF 35




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08167.1 hypothetical protein TVAG_302540 [Trichomonas
vaginalis G3]
         (378 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001349731  PfEMP1  (Establishment)  [Plasmodium falciparum]         29   0.13 
XP_001349522  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   1.3  
XP_819737   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.0  
XP_812720   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   7.8  

>EAY08167.1 on XP_001349731  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 85

 Score = 28.9 bits (63), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 108 IRDIVVSRDPQPVSLFSHIVFENLSMDTLNEALSHINPNTLTSQLW 153
           + DI VS  P+   +F  +V E L+ DT N +   I+ N LT   W
Sbjct: 39  LNDIYVSGSPK-YKMFIEVVLEPLNRDTFNLSSGDISTNKLTDNEW 83



>EAY08167.1 on XP_001349522  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 355

 Score = 27.3 bits (59), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)

Query: 108 IRDIVVSRDPQPVSLFSHIVFENLSMDTLNEALSHINPNTLTSQLWESLK 157
           + DI VS  P+   +F  +V E L+ DT N +  + + N LT   W   K
Sbjct: 105 LNDIYVSGSPK-YKMFIEVVLEPLNRDTFNLSSGNTSTNKLTDNEWNQWK 153



>EAY08167.1 on XP_819737   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1112

 Score = 26.9 bits (58), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 9/58 (15%)

Query: 257 GYSIKSGSSSHWDNEQSWIIEGSNDNINYTIIDEKVKNKDMGGNDRVHQWPCQADKAY 314
           GY ++SGS++        IIEG    +    +  K +NK  GG  R+H W     + Y
Sbjct: 423 GYGVQSGSTTA-------IIEGKEVMLITAPVYPKKENK--GGKGRLHLWVTDTARVY 471



>EAY08167.1 on XP_812720   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1041

 Score = 25.0 bits (53), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 11/59 (18%)

Query: 258 YSIKSGSSSHWDNEQSWIIEGSNDNINYTIIDEKVKNKDMGGNDRVHQWPCQADKAYRY 316
           Y +KSGS++        IIEG    +    +  K  NK  GG  R+H W    DKA  Y
Sbjct: 356 YGVKSGSTTA-------IIEGKKVMLITAPVYPKEDNK--GGKGRLHLW--VTDKARVY 403




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08171.1 acetyltransferase, GNAT family protein
[Trichomonas vaginalis G3]
         (150 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_829765  VSG  (Establishment)  [Trypanosoma brucei]                  24   4.3  

>EAY08171.1 on XP_829765  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 474

 Score = 24.3 bits (51), Expect = 4.3,   Method: Composition-based stats.
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 54  GAFMDNKLVGTIYSVEQIPRVVQ 76
           G F D++  G+ Y+ EQ+   VQ
Sbjct: 144 GCFADDENAGSFYTTEQLKNQVQ 166




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08178.1 hypothetical protein TVAG_302650 [Trichomonas
vaginalis G3]
         (188 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001349434  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   0.52 
XP_001350409  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   1.8  
XP_001609540  variant erythrocyte surface antigen-1, alpha subun...    26   2.2  
XP_812615   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   4.3  
XP_001609751  variant erythrocyte surface antigen-1, alpha subun...    25   4.4  
XP_814492   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   4.5  
XP_001609167  variant erythrocyte surface antigen-1, alpha subun...    25   4.7  
XP_001609666  variant erythrocyte surface antigen-1, alpha subun...    24   5.3  
XP_001609533  variant erythrocyte surface antigen-1, alpha subun...    24   6.9  
XP_001609565  variant erythrocyte surface antigen-1, alpha subun...    24   7.0  

>EAY08178.1 on XP_001349434  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2109

 Score = 27.7 bits (60), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 16/56 (28%)

Query: 6    RLMLATVAKDNYIEVEAKNNDYKTILEAQKV----LINDFAQTMPELDETENKIKD 57
            RLM  T+A            DYK I E + +    L+ D + +  E+ E E+KIKD
Sbjct: 988  RLMFYTIA------------DYKDIFEGKNMEVVNLLKDGSPSDKEMQERESKIKD 1031



>EAY08178.1 on XP_001350409  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2223

 Score = 25.8 bits (55), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)

Query: 2  DGDSRLMLATVAKDNYIEVEAKNNDYKTILEAQKVLINDFAQTMPEL 48
          D D++ M   + KD Y EV  +   YK   EA K  + +   T PEL
Sbjct: 12 DDDAKNMFDRIGKDVYDEVHGEAKKYK---EALKGKLQEAVSTSPEL 55



>EAY08178.1 on XP_001609540  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1349

 Score = 25.8 bits (55), Expect = 2.2,   Method: Composition-based stats.
 Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 24/109 (22%)

Query: 47  ELDETENKIKDIDAEIADVEEQLLNAQQILIQQLNSNQNKEPKGDAGNILPEIITSFQGD 106
           EL E   K++DI   I +V  QL NAQ+ L      ++     G   N L ++       
Sbjct: 686 ELREGIEKLRDILEAIGEVVVQLGNAQERL------DRGNADLGGVMNALKKV------- 732

Query: 107 LVKLSQEAVNNGQYNVPIFK--LIDLEERASNLISSLEESKMYPETEEE 153
                 E VNNG  +   FK  L ++  R   L+ +LE++    + +E+
Sbjct: 733 ------EGVNNGTND---FKGVLQEVLGRLEKLVEALEKAGGLKDVKEK 772



>EAY08178.1 on XP_812615   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1116

 Score = 24.6 bits (52), Expect = 4.3,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 41/84 (48%), Gaps = 12/84 (14%)

Query: 10  ATVAKDNYIEVEAKNNDYKTILEAQKVLINDFAQTMPELDETENKIKDIDAEIADVEEQL 69
           A +A+++  E  A+ ++ KT+   Q+  +N+  ++M          +D D +  D++ + 
Sbjct: 857 AEIAENSLPENNAQLSEGKTV---QQAALNEAKESMQ---------RDSDVQPQDLQSEK 904

Query: 70  LNAQQILIQQLNSNQNKEPKGDAG 93
           L     + +   SN  +EP+ D G
Sbjct: 905 LTVFSDVEKSSESNDTEEPEEDGG 928



>EAY08178.1 on XP_001609751  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1298

 Score = 24.6 bits (52), Expect = 4.4,   Method: Composition-based stats.
 Identities = 12/23 (52%), Positives = 16/23 (69%)

Query: 54  KIKDIDAEIADVEEQLLNAQQIL 76
           K+KD+  +I DV  QL NAQ+ L
Sbjct: 633 KLKDLLEKIGDVVVQLGNAQEAL 655



>EAY08178.1 on XP_814492   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 923

 Score = 24.6 bits (52), Expect = 4.5,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 27/54 (50%)

Query: 2   DGDSRLMLATVAKDNYIEVEAKNNDYKTILEAQKVLINDFAQTMPELDETENKI 55
           DG++  ++A   KD   E  + N+ +  +L  Q   + D   T  ++DE  +K+
Sbjct: 436 DGNNEELIALYEKDRSGEDTSSNSLWSALLTEQLKRVKDVLATWKKVDERVSKL 489



>EAY08178.1 on XP_001609167  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1317

 Score = 24.6 bits (52), Expect = 4.7,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 15/78 (19%)

Query: 50  ETENKIKDIDAEIADVEEQLLNAQQILIQQLNSNQNKEPKGDAGNILPEIITSFQGDLVK 109
           E   K+K++  +I +V  QL NAQ+ L         +  KG+    + + +   +G+LVK
Sbjct: 660 EVALKVKEVLQKIGEVVVQLGNAQEAL---------EGRKGEEITKVKDKLEGAKGELVK 710

Query: 110 LSQE------AVNNGQYN 121
             +E       VN G  N
Sbjct: 711 AQKELEAEVQKVNKGGLN 728



>EAY08178.1 on XP_001609666  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1269

 Score = 24.3 bits (51), Expect = 5.3,   Method: Composition-based stats.
 Identities = 12/28 (42%), Positives = 17/28 (60%)

Query: 49  DETENKIKDIDAEIADVEEQLLNAQQIL 76
           D    K+KD+  +I +V  QL NAQ+ L
Sbjct: 604 DTLAEKLKDVLEKIGEVVVQLGNAQEAL 631



>EAY08178.1 on XP_001609533  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1162

 Score = 24.3 bits (51), Expect = 6.9,   Method: Composition-based stats.
 Identities = 26/73 (35%), Positives = 32/73 (43%), Gaps = 8/73 (10%)

Query: 54  KIKDIDAEIADVEEQLLNAQQILIQQLNS--NQNKEPKGDAGNILPEIITSFQGDL-VKL 110
           KIKD+   I  V  QL NAQ+ L  +     N  K     A   L E +    G L VKL
Sbjct: 635 KIKDVLEAIGQVVVQLGNAQEALEGKDKEAINAVKTALEKAKGELEEAVKKVNGGLDVKL 694

Query: 111 SQ-----EAVNNG 118
            +     EA+ NG
Sbjct: 695 GEAKTALEALTNG 707



>EAY08178.1 on XP_001609565  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1341

 Score = 23.9 bits (50), Expect = 7.0,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 7/44 (15%)

Query: 50  ETENKIKDIDAEIADVEEQLLNAQQILIQQLNSNQNKEPKGDAG 93
           E    +KD+  +I +V  QL NAQ+ L       + K+P+G  G
Sbjct: 689 ELTGALKDLLEKIGEVVVQLGNAQEAL-------EGKKPEGIKG 725




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08189.1 hypothetical protein TVAG_307950 [Trichomonas
vaginalis G3]
         (53 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_805203   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   2.2  
XP_804269   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   3.3  
XP_807431   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           21   5.1  
XP_001349522  PfEMP1  (Establishment)  [Plasmodium falciparum]         21   5.3  
XP_001350798  PfEMP1  (Establishment)  [Plasmodium falciparum]         21   5.8  
XP_805710   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           21   6.2  
XP_812607   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           20   9.2  

>EAY08189.1 on XP_805203   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 844

 Score = 22.3 bits (46), Expect = 2.2,   Method: Composition-based stats.
 Identities = 9/21 (42%), Positives = 15/21 (71%)

Query: 12  NYNADNSDDTISKVNRSITQD 32
           +Y ADN  +TISK ++ +T +
Sbjct: 609 SYTADNKWETISKGDKKLTTE 629



>EAY08189.1 on XP_804269   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 525

 Score = 21.6 bits (44), Expect = 3.3,   Method: Composition-based stats.
 Identities = 9/21 (42%), Positives = 15/21 (71%)

Query: 12  NYNADNSDDTISKVNRSITQD 32
           +Y ADN  +TISK ++ +T +
Sbjct: 291 SYTADNKWETISKGDKKLTTE 311



>EAY08189.1 on XP_807431   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 940

 Score = 21.2 bits (43), Expect = 5.1,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 17/35 (48%)

Query: 16  DNSDDTISKVNRSITQDDTFDDSPDNPIDGTKFQT 50
           D+S D+ +    SI  D +   +P  P+D +   T
Sbjct: 666 DSSSDSSAHGTPSIPVDSSAHGTPSTPVDSSAHAT 700



>EAY08189.1 on XP_001349522  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 355

 Score = 21.2 bits (43), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 3/39 (7%)

Query: 1   MFAMNEETLMHNYNADNSDDTISKVNRSITQDDTFDDSP 39
           M    +  L+H Y  D     I+  NR+I   D +D+ P
Sbjct: 189 MLLWMKNLLLHQYKIDFLVVVINNRNRNI---DIYDEMP 224



>EAY08189.1 on XP_001350798  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2359

 Score = 21.2 bits (43), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)

Query: 16   DNSDDTISKVNRSITQDDTFDDS 38
            DNSD T++K   SITQD    D+
Sbjct: 1322 DNSD-TVAKGKASITQDTDLKDA 1343



>EAY08189.1 on XP_805710   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 753

 Score = 20.8 bits (42), Expect = 6.2,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 8   TLMHNYNADNSDDTISKVNRSITQD 32
           T+  +Y ADN  +TISK ++  T +
Sbjct: 586 TMGLSYTADNKWETISKGDKKPTTE 610



>EAY08189.1 on XP_812607   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 957

 Score = 20.4 bits (41), Expect = 9.2,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 20/44 (45%)

Query: 9   LMHNYNADNSDDTISKVNRSITQDDTFDDSPDNPIDGTKFQTSF 52
           L  N++ +   D    VN ++ + D  +       DG KFQ ++
Sbjct: 526 LSGNFSGNTWRDEYLGVNATVKKKDDGEAGATKTSDGVKFQGAW 569




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08196.1 protein tyrosine phosphatase, putative
[Trichomonas vaginalis G3]
         (145 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_805175   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   0.60 
AAA29228  LDH1B  (Establishment)  [Leishmania donovani]                26   1.1  
AAA29227  LDH1A  (Establishment)  [Leishmania donovani]                26   1.1  
XP_808176   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   1.9  
XP_820181   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   2.9  

>EAY08196.1 on XP_805175   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 728

 Score = 26.6 bits (57), Expect = 0.60,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 12/73 (16%)

Query: 50  IQSEDGAAPSQKIIDLFWSLFTS--PKRGHNDFIAVACRRGCGVSPALAAIALINKGYSP 107
           ++ + G AP  + +D+F    T   PK G             GV  A AA +L+N G   
Sbjct: 50  VEGKSGDAPLPQWVDIFVPEKTQVLPKEGSES----------GVKKAFAAPSLVNAGGVM 99

Query: 108 EEALEQMRKYNPH 120
               E +  YN H
Sbjct: 100 VAIAESLFGYNVH 112



>EAY08196.1 on AAA29228  LDH1B  (Establishment)  [Leishmania donovani]
          Length = 255

 Score = 25.8 bits (55), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 12/32 (37%), Positives = 19/32 (59%)

Query: 102 NKGYSPEEALEQMRKYNPHFITERKRRFLLTY 133
           +KG + EEA E ++KY  + + E+K    L Y
Sbjct: 59  SKGLTTEEAEELLKKYGRNELPEKKTPSWLIY 90



>EAY08196.1 on AAA29227  LDH1A  (Establishment)  [Leishmania donovani]
          Length = 255

 Score = 25.8 bits (55), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 12/32 (37%), Positives = 19/32 (59%)

Query: 102 NKGYSPEEALEQMRKYNPHFITERKRRFLLTY 133
           +KG + EEA E ++KY  + + E+K    L Y
Sbjct: 59  SKGLTTEEAEELLKKYGRNELPEKKTPSWLIY 90



>EAY08196.1 on XP_808176   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 889

 Score = 25.0 bits (53), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 8/58 (13%)

Query: 78  NDFIAVA---CRRGCGVSPALAAIALINKGYSPEEALEQMRKYNPHFI-----TERKR 127
           +D  AVA   C+ G G +   + +  ++KG  P+E + +  K    F+     TE+KR
Sbjct: 102 SDVFAVAEAHCKGGNGFTGIASQLLSMDKGKEPKEEVLKNAKEKTQFLEEVTSTEKKR 159



>EAY08196.1 on XP_820181   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 648

 Score = 24.6 bits (52), Expect = 2.9,   Method: Composition-based stats.
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 8   QRDYFMQYLSYFKQLHVKDLIVA 30
           +  YF+Q +S   Q H+KD + A
Sbjct: 203 ESKYFLQQISKHTQGHMKDFVTA 225




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08201.1 Inositol monophosphatase family protein
[Trichomonas vaginalis G3]
         (325 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_803334   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.3  
XP_809960   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.9  
XP_809179   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.5  
XP_809181   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   3.0  
XP_802709   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   6.9  
XP_001351079  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   9.7  

>EAY08201.1 on XP_803334   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 474

 Score = 27.3 bits (59), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 4/36 (11%)

Query: 5   KWATEINAAIEILKPVIGISLEGQEKLNKSEIETKK 40
           K ATE    I    PV+G+ LEGQEKL +   +++K
Sbjct: 260 KEATEGGTTI----PVMGVRLEGQEKLMELSYDSEK 291



>EAY08201.1 on XP_809960   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 890

 Score = 26.9 bits (58), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 4/27 (14%)

Query: 5   KWATEINAAIEILKPVIGISLEGQEKL 31
           K ATE    I    PV+G+ LEGQEKL
Sbjct: 581 KEATEGGTTI----PVMGVRLEGQEKL 603



>EAY08201.1 on XP_809179   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 853

 Score = 26.6 bits (57), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 5/52 (9%)

Query: 83  LRHVKSLLPA----DVDPVKACSVAV-HSISDKDERCWVIDPIDGTYGFVTG 129
           L  VK +L A    D    K C+  V   ++  D  C    P+DG  GF++G
Sbjct: 481 LEKVKEVLAAWKEADDTVSKLCATLVAREVTSPDNACSAAMPVDGLVGFLSG 532



>EAY08201.1 on XP_809181   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 665

 Score = 26.2 bits (56), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 5/52 (9%)

Query: 83  LRHVKSLLPA----DVDPVKACSVAV-HSISDKDERCWVIDPIDGTYGFVTG 129
           L  VK +L A    D    K C+  V   ++  D  C    P+DG  GF++G
Sbjct: 293 LEKVKEVLAAWKEADDTVSKLCATLVAREVTSPDNACSAAMPVDGLVGFLSG 344



>EAY08201.1 on XP_802709   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 626

 Score = 25.0 bits (53), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 4/62 (6%)

Query: 68  SVLGEEEIQNIDDEFLRHVKSLLPADVDPVKACSVAVHSISDKDERCWVIDPIDGTYGFV 127
           SVL  E++Q + D      K     D    K C  +  +       C  + P DG  GF+
Sbjct: 452 SVLLTEQLQRVKDVLATWKK----VDKTVSKLCPSSAENDGSTGNDCSAVIPTDGLVGFL 507

Query: 128 TG 129
           +G
Sbjct: 508 SG 509



>EAY08201.1 on XP_001351079  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2203

 Score = 24.6 bits (52), Expect = 9.7,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 14/28 (50%)

Query: 251  WGANEEHVWDIAPFELLVREAGGFATTG 278
            W ANE+H+W+     L   E    A+ G
Sbjct: 1129 WEANEKHIWNAMVCALTYEEKTSSASGG 1156




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08202.1 hypothetical protein TVAG_308080 [Trichomonas
vaginalis G3]
         (438 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609618  variant erythrocyte surface antigen-1, alpha subun...    32   0.10 
XP_001611365  variant erythrocyte surface antigen-1, alpha subun...    27   3.6  
XP_827715  VSG  (Establishment)  [Trypanosoma brucei]                  26   6.2  
XP_001611897  variant erythrocyte surface antigen-1, alpha subun...    25   8.1  

>EAY08202.1 on XP_001609618  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1325

 Score = 31.6 bits (70), Expect = 0.10,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 58/117 (49%), Gaps = 15/117 (12%)

Query: 14  IGLKKNAIKEAEQDIEKLKAYNKNLNEQIAKYDADSIEVIAKYRKEIDAKTATMNELINK 73
           IG  K A+ EA+ +++  K       +++ K   D ++   K +  +D K  T N     
Sbjct: 710 IGKVKTALGEAKTELDSAK-------QELEKDGLDVLDGEEKLKGALD-KLTTKN---GG 758

Query: 74  AQKLREETKAKIKELYDEN----DKAKQNVSKENDNILEQIAETEKKMQVILEFEQN 126
           +  + +E    +++  +++    D  K  +S+  + +LE + E EK+++ +LE EQ+
Sbjct: 759 SSGILKEVDGALEKATNKDGKEVDPGKNKISEAINKVLEMLKEMEKQLKEVLEKEQS 815



>EAY08202.1 on XP_001611365  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1335

 Score = 26.6 bits (57), Expect = 3.6,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 6/54 (11%)

Query: 91  ENDKAKQNVSKENDNILEQIAETEKKMQVILEFEQNKQKILDRIQSYDDQIEQS 144
           E D  K  VSK    + E + E EK+++ +L      + I D I+ Y+  ++ +
Sbjct: 778 EVDPGKNEVSKAIHKVWEVLKEMEKQLKEVL------KNIKDEIEQYESDMDDN 825



>EAY08202.1 on XP_827715  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 473

 Score = 25.8 bits (55), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 12/37 (32%), Positives = 24/37 (64%)

Query: 107 LEQIAETEKKMQVILEFEQNKQKILDRIQSYDDQIEQ 143
           ++ + E E +M+V+L+ + NK   L+RI+    +IE+
Sbjct: 328 MKALVEVENEMEVLLQDKHNKSAKLERIKELSQEIEK 364



>EAY08202.1 on XP_001611897  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1369

 Score = 25.4 bits (54), Expect = 8.1,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 4/45 (8%)

Query: 55  KYRKEIDAKTATMNELINKA----QKLREETKAKIKELYDENDKA 95
           K+RK+  +    ++E+I+K       L+E  K KIKE  + ++KA
Sbjct: 794 KWRKDYSSAKDRISEVIHKVLEVLTTLKEGVKEKIKEEMNGHEKA 838




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08206.1 oxidoreductase, short chain
dehydrogenase/reductase family protein [Trichomonas vaginalis G3]
         (271 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08208.1 hypothetical protein TVAG_308140 [Trichomonas
vaginalis G3]
         (1166 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_802978   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           40   6e-04
XP_809824   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           33   0.080
XP_954179  TashAT2  (Establishment)  [Theileria annulata]              30   1.3  
AAQ11891  TRAP  (Invasion)  [Plasmodium falciparum]                    29   1.6  
AAQ11894  TRAP  (Invasion)  [Plasmodium falciparum]                    29   1.7  
XP_805038   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   2.0  
ABV49611  Thymidine kinase  (Invasion)  [Leishmania donovani]          28   2.2  
AAA29774  TRAP  (Invasion)  [Plasmodium falciparum]                    28   2.5  
AAQ11892  TRAP  (Invasion)  [Plasmodium falciparum]                    28   3.0  
AAA29777  TRAP  (Invasion)  [Plasmodium falciparum]                    28   3.5  
AAW78136  TRAP  (Invasion)  [Plasmodium falciparum]                    28   3.6  
AAQ11895  TRAP  (Invasion)  [Plasmodium falciparum]                    28   3.6  
AAW78162  TRAP  (Invasion)  [Plasmodium falciparum]                    28   3.7  
AAW78176  TRAP  (Invasion)  [Plasmodium falciparum]                    28   3.8  
AAA29770  TRAP  (Invasion)  [Plasmodium falciparum]                    28   3.9  
AAW78151  TRAP  (Invasion)  [Plasmodium falciparum]                    28   4.0  
AAA29771  TRAP  (Invasion)  [Plasmodium falciparum]                    28   4.2  
AAW78152  TRAP  (Invasion)  [Plasmodium falciparum]                    28   4.2  
AAW78159  TRAP  (Invasion)  [Plasmodium falciparum]                    28   4.2  
AAA29776  TRAP  (Invasion)  [Plasmodium falciparum]                    28   4.4  
AAW78161  TRAP  (Invasion)  [Plasmodium falciparum]                    28   4.5  
AAW78144  TRAP  (Invasion)  [Plasmodium falciparum]                    28   4.8  
AAW78149  TRAP  (Invasion)  [Plasmodium falciparum]                    27   5.3  
XP_001351876  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   5.5  
AAW78148  TRAP  (Invasion)  [Plasmodium falciparum]                    27   5.6  
AAW78133  TRAP  (Invasion)  [Plasmodium falciparum]                    27   6.1  
AAW78158  TRAP  (Invasion)  [Plasmodium falciparum]                    27   6.6  
AAA29775  TRAP  (Invasion)  [Plasmodium falciparum]                    27   8.8  
ABA06451  MSA-2a2  (Invasion)  [Babesia bovis]                         27   9.6  
AAL15423  MSA-2b  (Invasion)  [Babesia bovis]                          27   9.6  

>EAY08208.1 on XP_802978   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 340

 Score = 40.0 bits (92), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 47/130 (36%), Gaps = 16/130 (12%)

Query: 1039 SEEKSPTKDKTENKTDEASKEGKETKSTDEPVTPQKEKKQEGDQKSPKKEEKPEEN---- 1094
            ++E + T    E   D  +   + T     P  PQ   +   D  S      P       
Sbjct: 192  AKEVAATSPPVEPANDTVTTNAQATAPAPTPAGPQPTDQATLDASSVPSGGAPSATARGR 251

Query: 1095 -QKSPKKENNSDESPNSPKKEKKNDEKADGDQPEGKKDEQNNKQSPGKKSKEQSAQKSPK 1153
             Q+SP K   + +SPN  ++ +++  K               +QSP K+ + Q + K P 
Sbjct: 252  AQQSPNKRRRAQQSPNKRRRAQQSPNK-----------RHRAQQSPNKRRRAQQSPKQPN 300

Query: 1154 PAAPSPKKDI 1163
                 P + +
Sbjct: 301  SLWAPPTQQM 310




 Score = 37.4 bits (85), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 45/91 (49%), Gaps = 4/91 (4%)

Query: 1035 TNEESEEKSPTKDKTENKTDEASKEGKETKSTDEPVTPQKEKKQEGDQKSPKKEEKPEEN 1094
            TN ++   +PT    +  TD+A+ +     S   P    + + Q+   K  + ++ P + 
Sbjct: 211  TNAQATAPAPTPAGPQ-PTDQATLDASSVPSGGAPSATARGRAQQSPNKRRRAQQSPNKR 269

Query: 1095 ---QKSPKKENNSDESPNSPKKEKKNDEKAD 1122
               Q+SP K + + +SPN  ++ +++ ++ +
Sbjct: 270  RRAQQSPNKRHRAQQSPNKRRRAQQSPKQPN 300



>EAY08208.1 on XP_809824   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 364

 Score = 33.1 bits (74), Expect = 0.080,   Method: Composition-based stats.
 Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 9/95 (9%)

Query: 1033 LETNEESEEKSPTKDKTENKTDEASKEGKETKSTDEPVTPQKEKKQEGDQKSPK-KEEKP 1091
            + TN +    SP     + +TD+A+       S   P TP + K +E     PK  E +P
Sbjct: 153  VNTNTQPTVPSPATAGPQ-QTDQATLNTSSVPSGGAPSTPAEPKSEE-----PKPAESRP 206

Query: 1092 EENQKSPKKENNSDESPNSPKKEKKNDEKADGDQP 1126
            EE +  P +  + +  P  P     +  +   DQP
Sbjct: 207  EEPK--PAESESEEPKPAEPNAATSSAREGTADQP 239



>EAY08208.1 on XP_954179  TashAT2  (Establishment)  [Theileria annulata]
          Length = 1161

 Score = 29.6 bits (65), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 9/94 (9%)

Query: 1072 PQKEKKQEGDQKSPKKE-EKPEENQKSPKKENNSDESPNSPKKEKKNDEKADGDQPEGKK 1130
            P+  K++ G  +  K E E+P+  +  P+K       P  PK+ K+   +    +PE   
Sbjct: 429  PEVPKRRPGRPRKHKPEPEQPKRKRGRPRKHKPE---PEQPKR-KRGRPRKQKPEPESDH 484

Query: 1131 DEQNNKQSPGKKSKEQSAQKSPKPAAPSPKKDIF 1164
             E++ +  P    +EQ  + S K   PSP+K  F
Sbjct: 485  SEESTQPHP----QEQETEDSIKALGPSPEKRPF 514



>EAY08208.1 on AAQ11891  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 559

 Score = 29.3 bits (64), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 16/103 (15%)

Query: 1060 GKETKST-----DEPVTPQKEKKQEGDQKSPKKE-----EKPEENQKSPKKENNSDESP- 1108
            GK T+S       E  T + +++ E ++  PK+E      +PE++Q  P+ +N + E P 
Sbjct: 258  GKGTRSRKREILHEGCTSELQEQCEEERCPPKREPLDVPHEPEDDQPRPRGDNFAVEKPE 317

Query: 1109 -----NSPKKEKKNDEKADGDQPEGKKDEQNNKQSPGKKSKEQ 1146
                 N+P++   N E+  G+ P G   ++N +  P     EQ
Sbjct: 318  ENIIDNNPQEPSPNPEEGKGENPNGFDLDENPENPPNPDIPEQ 360



>EAY08208.1 on AAQ11894  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 559

 Score = 29.3 bits (64), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 16/103 (15%)

Query: 1060 GKETKST-----DEPVTPQKEKKQEGDQKSPKKE-----EKPEENQKSPKKENNSDESP- 1108
            GK T+S       E  T + +++ E ++  PK+E     ++PE++Q  P+ +N + E P 
Sbjct: 258  GKGTRSRKREILHEGCTSELQEQCEEERCPPKREPLDVPDEPEDDQPRPRGDNFAVEKPE 317

Query: 1109 -----NSPKKEKKNDEKADGDQPEGKKDEQNNKQSPGKKSKEQ 1146
                 N+P++   N E+  G+ P G   ++N +  P     EQ
Sbjct: 318  ENIIDNNPQEPSPNPEEGKGENPNGFDLDENPENPPNPDIPEQ 360



>EAY08208.1 on XP_805038   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 927

 Score = 28.9 bits (63), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 8/84 (9%)

Query: 1044 PTKDKTENKTDEASKEGKETKSTDEPVTPQKEKKQEGDQKSPKK-EEKPEENQKSPKKEN 1102
            P       +TD+ +       S   P TP + K +E     PK  E +PEE +  P +  
Sbjct: 726  PPATAGPQQTDQTTLNTSSVPSGGAPPTPAEPKSEE-----PKPAESRPEEPK--PAESE 778

Query: 1103 NSDESPNSPKKEKKNDEKADGDQP 1126
            + +  P  P     +  +   DQP
Sbjct: 779  SEEPKPAEPNAATSSAREGTADQP 802



>EAY08208.1 on ABV49611  Thymidine kinase  (Invasion)  [Leishmania donovani]
          Length = 255

 Score = 28.5 bits (62), Expect = 2.2,   Method: Composition-based stats.
 Identities = 11/18 (61%), Positives = 16/18 (88%)

Query: 1003 SLEETRMQELSIKEVEKQ 1020
            S+EE R Q+++IKEVEK+
Sbjct: 184  SIEEMRTQQMAIKEVEKR 201



>EAY08208.1 on AAA29774  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 559

 Score = 28.5 bits (62), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 16/103 (15%)

Query: 1060 GKETKST-----DEPVTPQKEKKQEGDQKSPKKE-----EKPEENQKSPKKENNSDESP- 1108
            GK T+S       E  T + +++ E ++  PK+E      +PE++Q  P+ +N + E P 
Sbjct: 258  GKGTRSRKREILHEGCTSEIQEQCEEERCPPKREPLDVPHEPEDDQPRPRGDNFAVEKPK 317

Query: 1109 -----NSPKKEKKNDEKADGDQPEGKKDEQNNKQSPGKKSKEQ 1146
                 N+P++   N E+  G+ P G   ++N +  P     EQ
Sbjct: 318  ENIIDNNPQEPSPNPEEGKGENPNGFDLDENPENPPNPDIPEQ 360



>EAY08208.1 on AAQ11892  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 559

 Score = 28.1 bits (61), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 16/103 (15%)

Query: 1060 GKETKST-----DEPVTPQKEKKQEGDQKSPKKE-----EKPEENQKSPKKENNSDESP- 1108
            GK T+S       E  T + +++ E ++  PK+E     ++PE++Q  P+ +N + E P 
Sbjct: 258  GKGTRSRKREILHEGCTSELQEQCEEERCPPKREPLDVPDEPEDDQPRPRGDNFAVEKPE 317

Query: 1109 -----NSPKKEKKNDEKADGDQPEGKKDEQNNKQSPGKKSKEQ 1146
                 N+P++   N E+  G+ P G   ++N +  P     +Q
Sbjct: 318  ENIIDNNPQEPSPNPEEGKGENPNGFDLDENPENPPNPDIPQQ 360



>EAY08208.1 on AAA29777  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 559

 Score = 28.1 bits (61), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 16/103 (15%)

Query: 1060 GKETKST-----DEPVTPQKEKKQEGDQKSPKKE-----EKPEENQKSPKKENNSDESP- 1108
            GK T+S       E  T + +++ E ++  PK E     ++PE++Q  P+ +N + E P 
Sbjct: 258  GKGTRSRKREILHEGCTSELQEQCEEERCPPKWEPLDVPQEPEDDQPRPRGDNFAVEKPE 317

Query: 1109 -----NSPKKEKKNDEKADGDQPEGKKDEQNNKQSPGKKSKEQ 1146
                 N+P++   N E+  G+ P G   ++N +  P     EQ
Sbjct: 318  ENIIDNNPQEPSPNPEEGKGENPNGFDLDENPENPPNPDIPEQ 360



>EAY08208.1 on AAW78136  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 542

 Score = 28.1 bits (61), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 16/85 (18%)

Query: 1060 GKETKST-----DEPVTPQKEKKQEGDQKSPKKE-----EKPEENQKSPKKENNSDESP- 1108
            GK T+S       E  T + +++ E ++  PK E     ++PE++Q  P+ +N+S + P 
Sbjct: 258  GKGTRSRKREILHEGCTSEIQEQCEEERCPPKWEPLDVPDEPEDDQPRPRGDNSSVQKPE 317

Query: 1109 -----NSPKKEKKNDEKADGDQPEG 1128
                 N+P++   N E+  G+ P G
Sbjct: 318  ENIIDNNPQEPSPNPEEGKGENPNG 342



>EAY08208.1 on AAQ11895  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 559

 Score = 28.1 bits (61), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 16/103 (15%)

Query: 1060 GKETKST-----DEPVTPQKEKKQEGDQKSPKKE-----EKPEENQKSPKKENNSDESP- 1108
            GK T+S       E  T + +++ E ++  PK+E     ++PE++Q  P+ +N + E P 
Sbjct: 258  GKGTRSRKREILHEGCTSELQEQCEEERCPPKREPLDVPDEPEDDQPRPRGDNFAVEKPE 317

Query: 1109 -----NSPKKEKKNDEKADGDQPEGKKDEQNNKQSPGKKSKEQ 1146
                 N+P++   N E+  G+ P G   ++N +  P     +Q
Sbjct: 318  ENIIDNNPQEPSPNPEEGKGENPNGFDLDENPENPPNPDIPQQ 360



>EAY08208.1 on AAW78162  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 542

 Score = 28.1 bits (61), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 16/85 (18%)

Query: 1060 GKETKST-----DEPVTPQKEKKQEGDQKSPKKE-----EKPEENQKSPKKENNSDESP- 1108
            GK T+S       E  T + +++ E ++  PK E     ++PE++Q  P+ +N+S + P 
Sbjct: 258  GKGTRSRKREILHEGCTSEIQEQCEEERCPPKWEPLDVPDEPEDDQPRPRGDNSSVQKPE 317

Query: 1109 -----NSPKKEKKNDEKADGDQPEG 1128
                 N+P++   N E+  G+ P G
Sbjct: 318  ENIIDNNPQEPSPNPEEGKGENPNG 342



>EAY08208.1 on AAW78176  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 545

 Score = 28.1 bits (61), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 16/85 (18%)

Query: 1060 GKETKST-----DEPVTPQKEKKQEGDQKSPKKE-----EKPEENQKSPKKENNSDESP- 1108
            GK T+S       E  T + +++ E ++  PK E     ++PE++Q  P+ +N+S + P 
Sbjct: 258  GKGTRSRKREILHEGCTSEIQEQCEEERCPPKWEPLDVPDEPEDDQPRPRGDNSSVQKPE 317

Query: 1109 -----NSPKKEKKNDEKADGDQPEG 1128
                 N+P++   N E+  G+ P G
Sbjct: 318  ENIIDNNPQEPSPNPEEGKGENPNG 342



>EAY08208.1 on AAA29770  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 559

 Score = 27.7 bits (60), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 6/64 (9%)

Query: 1089 EKPEENQKSPKKENNSDESP------NSPKKEKKNDEKADGDQPEGKKDEQNNKQSPGKK 1142
            ++PE++Q  P+ +N + E P      N+P++   N E+  G+ P G   ++N +  P   
Sbjct: 297  QEPEDDQPRPRGDNFAVEKPEENIIDNNPQEPSPNPEEGKGENPNGFDLDENPENPPNPD 356

Query: 1143 SKEQ 1146
              EQ
Sbjct: 357  IPEQ 360



>EAY08208.1 on AAW78151  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 545

 Score = 27.7 bits (60), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 16/85 (18%)

Query: 1060 GKETKST-----DEPVTPQKEKKQEGDQKSPKKE-----EKPEENQKSPKKENNSDESPN 1109
            GK T+S       E  T + +++ E ++  PK+E      +PE++Q  P+ +N + E PN
Sbjct: 258  GKGTRSRKREILHEGCTSELQEQCEEERCPPKREPLDVPHEPEDDQPRPRGDNFAVEEPN 317

Query: 1110 ------SPKKEKKNDEKADGDQPEG 1128
                  +P++   N E+  G+ P G
Sbjct: 318  ENIIDNNPQEPSPNPEEGKGENPNG 342



>EAY08208.1 on AAA29771  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 559

 Score = 27.7 bits (60), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 16/96 (16%)

Query: 1060 GKETKST-----DEPVTPQKEKKQEGDQKSPKKE-----EKPEENQKSPKKENNSDESP- 1108
            GK T+S       E  T + +++ E ++  PK+E     ++PE++Q  P+ +N + E P 
Sbjct: 258  GKGTRSRKREILHEGCTSELQEQCEEERCPPKREPLDVPQEPEDDQPRPRGDNFAVEKPE 317

Query: 1109 -----NSPKKEKKNDEKADGDQPEGKKDEQNNKQSP 1139
                 N+P++   N E+  G+ P G   ++N +  P
Sbjct: 318  KNIIDNNPQEPSPNPEEGKGENPNGFDLDENPENPP 353



>EAY08208.1 on AAW78152  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 542

 Score = 27.7 bits (60), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 16/85 (18%)

Query: 1060 GKETKST-----DEPVTPQKEKKQEGDQKSPKKE-----EKPEENQKSPKKENNSDESP- 1108
            GK T+S       E  T + +++ E ++  PK E     ++PE++Q  P+ +N+S + P 
Sbjct: 258  GKGTRSRKREILHEGCTSEIQEQCEEERCPPKWEPLDVPDEPEDDQPRPRGDNSSVQKPE 317

Query: 1109 -----NSPKKEKKNDEKADGDQPEG 1128
                 N+P++   N E+  G+ P G
Sbjct: 318  ENIIDNNPQEPSPNPEEGKGENPNG 342



>EAY08208.1 on AAW78159  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 27.7 bits (60), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 16/103 (15%)

Query: 1060 GKETKST-----DEPVTPQKEKKQEGDQKSPKKE-----EKPEENQKSPKKENNSDESPN 1109
            GK T+S       E  T + +++ E ++  PK+E      +PE++Q  P+ +N   E PN
Sbjct: 258  GKGTRSRKREILHEGCTSELQEQCEEERCPPKREPLDVPHEPEDDQPRPRGDNFVVEKPN 317

Query: 1110 ------SPKKEKKNDEKADGDQPEGKKDEQNNKQSPGKKSKEQ 1146
                  +P++   N E+  G+ P G   ++N +  P     EQ
Sbjct: 318  ENIIDNNPQEPSPNPEEGKGENPNGFDLDENPENPPNLDIPEQ 360



>EAY08208.1 on AAA29776  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 559

 Score = 27.7 bits (60), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 16/103 (15%)

Query: 1060 GKETKST-----DEPVTPQKEKKQEGDQKSPKKE-----EKPEENQKSPKKENNSDESP- 1108
            GK T+S       E  T + +++ E ++  PK+E      +PE++Q  P+ +N + E P 
Sbjct: 258  GKGTRSRKREILHEGCTSELQEQCEEERCPPKREPLDVPHEPEDDQPRPRGDNFAVEKPE 317

Query: 1109 -----NSPKKEKKNDEKADGDQPEGKKDEQNNKQSPGKKSKEQ 1146
                 N+P++   N E+  G+ P+G   ++N +  P     +Q
Sbjct: 318  ENIIDNNPQEPSPNPEEGKGENPKGFDLDENPENPPNPDIPQQ 360



>EAY08208.1 on AAW78161  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 554

 Score = 27.7 bits (60), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 16/85 (18%)

Query: 1060 GKETKST-----DEPVTPQKEKKQEGDQKSPKKE-----EKPEENQKSPKKENNSDESP- 1108
            GK T+S       E  T + +++ E ++  PK E     ++PE++Q  P+ +N+S + P 
Sbjct: 258  GKGTRSRKREILHEGCTSEIQEQCEEERCPPKWEPLDVPDEPEDDQPRPRGDNSSVQKPE 317

Query: 1109 -----NSPKKEKKNDEKADGDQPEG 1128
                 N+P++   N E+  G+ P G
Sbjct: 318  ENIIDNNPQEPSPNPEEGKGENPNG 342



>EAY08208.1 on AAW78144  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 542

 Score = 27.7 bits (60), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 16/85 (18%)

Query: 1060 GKETKST-----DEPVTPQKEKKQEGDQKSPKKE-----EKPEENQKSPKKENNSDESPN 1109
            GK T+S       E  T + +++ E ++  PK+E      +PE++Q  P+ +N + E PN
Sbjct: 258  GKGTRSRKREILHEGCTSELQEQCEEERCPPKREPLDVPHEPEDDQPRPRGDNFAVEKPN 317

Query: 1110 ------SPKKEKKNDEKADGDQPEG 1128
                  +P++   N E+  G+ P G
Sbjct: 318  ENIIDNNPQEPSPNPEEGKGENPNG 342



>EAY08208.1 on AAW78149  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 542

 Score = 27.3 bits (59), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 16/85 (18%)

Query: 1060 GKETKST-----DEPVTPQKEKKQEGDQKSPKKE-----EKPEENQKSPKKENNSDESPN 1109
            GK T+S       E  T + +++ E ++  PK+E      +PE++Q  P+ +N + E PN
Sbjct: 258  GKGTRSRKREILHEGCTSEIQEQCEEERCPPKREPLDVPHEPEDDQPRPRGDNFAVEKPN 317

Query: 1110 ------SPKKEKKNDEKADGDQPEG 1128
                  +P++   N E+  G+ P G
Sbjct: 318  ENIIDNNPQEPSPNPEEGKGENPNG 342



>EAY08208.1 on XP_001351876  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3164

 Score = 27.7 bits (60), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)

Query: 1045 TKDKTENKTDEASKEGKETKSTDEPVTPQKEKKQEGDQKSPKKEEKPEENQKSPKK 1100
            TK KT ++  + S+  +E ++ DEP +P +    +    + KKEEK     K PKK
Sbjct: 1974 TKKKTPSRKTQPSQPAREMQA-DEPASPSRRASLKEKAVASKKEEKTARPTKPPKK 2028



>EAY08208.1 on AAW78148  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 27.3 bits (59), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 16/103 (15%)

Query: 1060 GKETKST-----DEPVTPQKEKKQEGDQKSPKKE-----EKPEENQKSPKKENNSDESP- 1108
            GK T+S       E  T + +++ E ++  PK E     ++PE++Q  P+ +N++ + P 
Sbjct: 258  GKGTRSRKREILHEGCTSEIQEQCEEERCPPKWEPLDVPDEPEDDQPRPRGDNSAVQEPE 317

Query: 1109 -----NSPKKEKKNDEKADGDQPEGKKDEQNNKQSPGKKSKEQ 1146
                 N+P++   N E+  G+ P G   ++N +  P     +Q
Sbjct: 318  ENIIDNNPQEPSPNPEEGKGENPNGFDLDENPENPPNPDIPQQ 360



>EAY08208.1 on AAW78133  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 27.3 bits (59), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 13/85 (15%)

Query: 1073 QKEKKQEGDQKSPKKE-----EKPEENQKSPKKENNSDESP------NSPKKEKKNDEKA 1121
            Q++ ++EG    PK+E      +PE+++  P+ +N + E P      N+P++   N E+ 
Sbjct: 278  QEQCEEEG--CPPKREPLDVPHEPEDDEPRPRGDNFAVEKPEKNIIDNNPQEPSPNPEEG 335

Query: 1122 DGDQPEGKKDEQNNKQSPGKKSKEQ 1146
             G+ P G   ++N +  P     EQ
Sbjct: 336  KGENPNGFDLDENPENPPNPDIPEQ 360



>EAY08208.1 on AAW78158  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 542

 Score = 27.3 bits (59), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 12/65 (18%)

Query: 1076 KKQEGDQKSPKKEE------KPEENQKSPKKENNSDESP------NSPKKEKKNDEKADG 1123
            K+Q  +++ P K E      +PE++Q  P+ +N + E P      N+P++   N E+  G
Sbjct: 278  KEQCEEERCPPKWEPLDVPDEPEDDQPRPRGDNFAVEKPEENIIDNNPQEPSPNPEEGKG 337

Query: 1124 DQPEG 1128
            + P G
Sbjct: 338  ENPNG 342



>EAY08208.1 on AAA29775  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 574

 Score = 26.6 bits (57), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 16/85 (18%)

Query: 1060 GKETKST-----DEPVTPQKEKKQEGDQKSPKKE-----EKPEENQKSPKKENNSDESP- 1108
            GK T+S       E  T + +++ E ++  PK+E     ++PE++Q  P+ +N + E P 
Sbjct: 258  GKGTRSRKREILHEGCTSELQEQCEEERCLPKREPLDVPDEPEDDQPRPRGDNFAVEKPK 317

Query: 1109 -----NSPKKEKKNDEKADGDQPEG 1128
                 N+P++   N E+  G+ P G
Sbjct: 318  ENIIDNNPQEPSPNPEEGKGENPNG 342



>EAY08208.1 on ABA06451  MSA-2a2  (Invasion)  [Babesia bovis]
          Length = 287

 Score = 26.6 bits (57), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 1/63 (1%)

Query: 1096 KSPKKENNSDESPNSPKKEKKNDEKADGDQPEGKKDEQNNKQSPGKKSKEQSAQKSPKPA 1155
            K+P   ++   +P + K    N  ++ G QP+ +  E    Q+P  +S  Q+ Q +    
Sbjct: 203  KTPSPTSSPQATPGA-KPAAPNTSESAGGQPQQETPENRPSQAPSPQSPPQTEQSTSNLN 261

Query: 1156 APS 1158
             PS
Sbjct: 262  GPS 264



>EAY08208.1 on AAL15423  MSA-2b  (Invasion)  [Babesia bovis]
          Length = 287

 Score = 26.6 bits (57), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 1/63 (1%)

Query: 1096 KSPKKENNSDESPNSPKKEKKNDEKADGDQPEGKKDEQNNKQSPGKKSKEQSAQKSPKPA 1155
            K+P   ++   +P + K    N  ++ G QP+ +  E    Q+P  +S  Q+ Q +    
Sbjct: 203  KTPSPTSSPQATPGA-KPAAPNTSESAGGQPQQETPENRPSQAPSPQSPPQTEQSTSNLN 261

Query: 1156 APS 1158
             PS
Sbjct: 262  GPS 264




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08228.1 hypothetical protein TVAG_308340 [Trichomonas
vaginalis G3]
         (793 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001347690  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   5.4  
AAY44835  MSA-1  (Invasion)  [Babesia bovis]                           26   7.8  
AAY44838  MSA-1  (Invasion)  [Babesia bovis]                           26   7.9  

>EAY08228.1 on XP_001347690  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2215

 Score = 26.9 bits (58), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 2/67 (2%)

Query: 537 KLVERNAEEGFQLIKSSVE--LKNALALNDLGECYLYGNGCQQNITEARRYFEQAANCRI 594
           +  E  AEE  +L K  ++  +KN    N+   C L G  C++ I   ++ FE A   + 
Sbjct: 307 RWFEEWAEEFCRLRKHKLQNAIKNCRGENNEKYCDLNGYDCEKTIRGKKKLFEGADCKKC 366

Query: 595 PRGCTNY 601
              C N+
Sbjct: 367 TVTCDNF 373



>EAY08228.1 on AAY44835  MSA-1  (Invasion)  [Babesia bovis]
          Length = 270

 Score = 26.2 bits (56), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 12/72 (16%)

Query: 280 SKVRFFQLCKFAESGNAAAMNKVGLQFEKGIDCDRDDAQSLN--FFNMAADKGSIE--AL 335
           S ++ +  CK        A+++V  +   G +  +++ + +   F N   +KG +E  AL
Sbjct: 127 SVIQIYHKCK--------ALDEVAKRLFSGGEERKENIEEMKTYFKNNVYNKGDVEGKAL 178

Query: 336 CNLGRIYFEGNN 347
            N+G ++ EG N
Sbjct: 179 VNMGSMFLEGEN 190



>EAY08228.1 on AAY44838  MSA-1  (Invasion)  [Babesia bovis]
          Length = 266

 Score = 26.2 bits (56), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 12/72 (16%)

Query: 280 SKVRFFQLCKFAESGNAAAMNKVGLQFEKGIDCDRDDAQSLN--FFNMAADKGSIE--AL 335
           S ++ +  CK        A+++V  +   G +  +++ + +   F N   +KG +E  AL
Sbjct: 127 SVIQIYHKCK--------ALDEVAKRLFSGGEERKENIEEMKTYFKNNVYNKGDVEGKAL 178

Query: 336 CNLGRIYFEGNN 347
            N+G ++ EG N
Sbjct: 179 VNMGSMFLEGEN 190




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08229.1 hypothetical protein TVAG_308350 [Trichomonas
vaginalis G3]
         (110 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_808217   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   4.2  
XP_817875   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   4.2  

>EAY08229.1 on XP_808217   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 880

 Score = 23.5 bits (49), Expect = 4.2,   Method: Composition-based stats.
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 3/32 (9%)

Query: 66  LYRSDKTPEELNLEELHVVEHPWQKKKPGSTK 97
           LYRSD + E  N EEL  +   ++KKK    K
Sbjct: 425 LYRSDGSSEANNNEELIAL---YEKKKDNDEK 453



>EAY08229.1 on XP_817875   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 935

 Score = 23.5 bits (49), Expect = 4.2,   Method: Composition-based stats.
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 3/32 (9%)

Query: 66  LYRSDKTPEELNLEELHVVEHPWQKKKPGSTK 97
           LYRSD + E  N EEL  +   ++KKK    K
Sbjct: 478 LYRSDGSSEANNNEELIAL---YEKKKDNDEK 506




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08230.1 hypothetical protein TVAG_403980 [Trichomonas
vaginalis G3]
         (320 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_806401   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.3  
XP_821137   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.8  
XP_809850   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.2  
XP_812988   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   5.2  
ABW16954  ROM1  (Invasion)  [Plasmodium falciparum]                    25   5.9  
XP_818346   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   6.6  

>EAY08230.1 on XP_806401   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 863

 Score = 27.3 bits (59), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 16/133 (12%)

Query: 107 GSKGAQFLYSQAAYNNSFIEGTVFNCPPNYGGNTIRLTG-----GNQIIYSVNDSYN-QA 160
           G++G   LY  A YN + +     +  P  G N+I L G     G++    +  SYN + 
Sbjct: 627 GAQGQNQLYHFANYNFTLVATVSIHGLPKDGDNSIPLMGAKVNDGDKNTVLLGLSYNREK 686

Query: 161 NWDSCFYIESGISIVVNFSSFGYNRNYEVNEMIESQIQITMFYNNIINNTNCDELFLLGG 220
            W+    + SG     +  S+     Y+V  ++++ IQ +++ +       C+ L     
Sbjct: 687 RWE---LLHSGEKTSEHSRSWEQGATYQVATVLQNGIQGSVYVD---GQRVCESLQ---- 736

Query: 221 SNLECYHCSFINN 233
           SNLE      I++
Sbjct: 737 SNLENTKSKMISH 749



>EAY08230.1 on XP_821137   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 956

 Score = 26.9 bits (58), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 23/50 (46%)

Query: 96  RFCGDLCKGLTGSKGAQFLYSQAAYNNSFIEGTVFNCPPNYGGNTIRLTG 145
           +F G   +   GS+G   LY  A YN + +     +  P  GG+ I L G
Sbjct: 569 KFQGAWAEWPVGSQGQNQLYHFANYNFTLVATVSIHGEPKEGGSPIPLMG 618



>EAY08230.1 on XP_809850   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 915

 Score = 26.6 bits (57), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 27/115 (23%), Positives = 42/115 (36%), Gaps = 8/115 (6%)

Query: 54  CGIYISSSNYDFFETDSTFYNCYSPDTGGGMYVYGSNSAINRRFCGDLCKGLTGSKGAQF 113
            G    S +Y+ +  +    N    D   G  ++G       R  G   +   G +G   
Sbjct: 522 VGFLSGSFSYNTWRDEYLGVNATVKDGAAGAILHGGGVKFTGR--GAWAEWPVGEQGENQ 579

Query: 114 LYSQAAYNNSFIEGTVFNCPPNYGGNTIRLTG------GNQIIYSVNDSYNQANW 162
           LY  A YN + +     +  P  G NTI L G      GN +   ++ + N   W
Sbjct: 580 LYHFANYNFTLVATVSIDKAPEEGDNTIPLMGVNMKGAGNSVFLGLSYNNNGKKW 634



>EAY08230.1 on XP_812988   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 889

 Score = 25.4 bits (54), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 8/73 (10%)

Query: 96  RFCGDLCKGLTGSKGAQFLYSQAAYNNSFIEGTVFNCPPNYGGNTIRLTG------GNQI 149
           +F G   +   GS+G   LY  A YN + +     +  P  G  TI L G      GN I
Sbjct: 543 KFQGAWAEWPVGSQGENQLYHFANYNFTLVATVSIHGEPKEG--TIPLMGAKMNDAGNSI 600

Query: 150 IYSVNDSYNQANW 162
           ++ ++    +  W
Sbjct: 601 LFGLSYDNKEKKW 613



>EAY08230.1 on ABW16954  ROM1  (Invasion)  [Plasmodium falciparum]
          Length = 278

 Score = 25.0 bits (53), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 15/63 (23%), Positives = 29/63 (46%)

Query: 114 LYSQAAYNNSFIEGTVFNCPPNYGGNTIRLTGGNQIIYSVNDSYNQANWDSCFYIESGIS 173
           +++ A Y + + E T FN  P+Y  +       ++ I  +N  +    W S   + S I 
Sbjct: 4   IHTLAEYRDDYAENTPFNRTPDYYQSQSSFVQRSKPIDLLNLIFPHFTWKSFMVVISIIQ 63

Query: 174 IVV 176
           ++V
Sbjct: 64  LIV 66



>EAY08230.1 on XP_818346   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 927

 Score = 25.0 bits (53), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 15/50 (30%), Positives = 22/50 (44%)

Query: 96  RFCGDLCKGLTGSKGAQFLYSQAAYNNSFIEGTVFNCPPNYGGNTIRLTG 145
           +F G   +   G +G   LY  A YN + +     +  P  GG+ I L G
Sbjct: 546 KFQGAWAEWPVGEQGENQLYHFANYNFTLVATVSIDGEPEEGGSPIPLMG 595




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08232.1 hypothetical protein TVAG_404000 [Trichomonas
vaginalis G3]
         (1157 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 75   2e-14
XP_001348153  MAEBL  (Adhesin)  [Plasmodium falciparum]                42   2e-04
XP_001350082  Rh2b  (Adhesin)  [Plasmodium falciparum]                 35   0.039
XP_954179  TashAT2  (Establishment)  [Theileria annulata]              34   0.065
XP_827769  VSG  (Establishment)  [Trypanosoma brucei]                  32   0.24 
XP_814930   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.82 
AAO83837  SUB2  (Protease)  [Toxoplasma gondii]                        29   1.0  
XP_954175  TashAT3  (Establishment)  [Theileria annulata]              30   1.1  
XP_803400  VSG  (Establishment)  [Trypanosoma brucei]                  29   1.3  
XP_802978   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   1.4  
XP_001609667  variant erythrocyte surface antigen-1, alpha subun...    28   5.3  
XP_001351517  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   7.2  

>EAY08232.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 75.1 bits (183), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/133 (46%), Positives = 98/133 (73%), Gaps = 14/133 (10%)

Query: 955  KRKEEEKKRKEEEEKRKKEEERKRKEEEERKRKEEE---EERKRREEEERKRKEEEERKR 1011
            KR+E+E+ +KEEE KR +E+ER  +E++E+ +KEEE   +E++R ++EE  +++E+ER +
Sbjct: 2740 KRQEQERLQKEEELKR-QEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQ 2798

Query: 1012 REE-----EERRIKEEKERQRLIEEERRRQEDEARLRKAEEERKRREEEDRKQREMEELR 1066
            +EE     E+ R++ EK+ Q   EEE +RQE E RL+K  EE  +R+E++R Q+E EEL+
Sbjct: 2799 KEEELKRQEQERLEREKQEQLQKEEELKRQEQE-RLQK--EEALKRQEQERLQKE-EELK 2854

Query: 1067 RQEEERL-RLKIQ 1078
            RQE+ERL R KI+
Sbjct: 2855 RQEQERLERKKIE 2867




 Score = 72.4 bits (176), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/157 (38%), Positives = 115/157 (73%), Gaps = 14/157 (8%)

Query: 926  EEKKKKEEEEERKRKEKEEEERKKIEEEKKRKEEEKKRKEEEEKRKKEEERKRKEEEERK 985
            +E+++ ++EEE KR+E+E  ER+K  +E+ +KEEE KR+E+E  R ++EE  +++E+ER 
Sbjct: 2742 QEQERLQKEEELKRQEQERLEREK--QEQLQKEEELKRQEQE--RLQKEEALKRQEQERL 2797

Query: 986  RKEEEEERKRREEEERKRKEEEERKRREEEERRIKEEKERQRLIEEERRRQEDEARLRKA 1045
            +KEEE    +R+E+ER  +E++E+ ++EEE +R    +E++RL +EE  +++++ RL+K 
Sbjct: 2798 QKEEE---LKRQEQERLEREKQEQLQKEEELKR----QEQERLQKEEALKRQEQERLQK- 2849

Query: 1046 EEERKRREEEDRKQREMEELRRQEEERLRLKIQEEMV 1082
            EEE KR+E+E  +++++E   R  E+ ++ K++ +MV
Sbjct: 2850 EEELKRQEQERLERKKIELAER--EQHIKSKLESDMV 2884




 Score = 57.4 bits (137), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/87 (50%), Positives = 65/87 (74%), Gaps = 7/87 (8%)

Query: 995  RREEEERKRKEEEERKRREEEERRIKEEKERQRLIEEERRRQEDEARLRKAEEERKRREE 1054
            +R+E+ER +KEEE  KR+E+E  R++ EK+ Q   EEE +RQE E RL+K  EE  +R+E
Sbjct: 2740 KRQEQERLQKEEE-LKRQEQE--RLEREKQEQLQKEEELKRQEQE-RLQK--EEALKRQE 2793

Query: 1055 EDRKQREMEELRRQEEERLRLKIQEEM 1081
            ++R Q+E EEL+RQE+ERL  + QE++
Sbjct: 2794 QERLQKE-EELKRQEQERLEREKQEQL 2819




 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/114 (39%), Positives = 80/114 (70%), Gaps = 8/114 (7%)

Query: 926  EEKKKKEEEEERKRKEKEEEERKKIEEEKKRKEEEKKRKEEEEKRKKEEERKRKEEEERK 985
            +E+++ ++EEE KR+E+E  ER+K  +E+ +KEEE KR+E+E  R ++EE  +++E+ER 
Sbjct: 2792 QEQERLQKEEELKRQEQERLEREK--QEQLQKEEELKRQEQE--RLQKEEALKRQEQERL 2847

Query: 986  RKEEEEERKRREEEERKRKEEEERKRREEEERRIKEEKERQRLIEEERRRQEDE 1039
            +KEEE +R+ +E  ERK+ E  ER    E+  + K E +  ++I++E  +++DE
Sbjct: 2848 QKEEELKRQEQERLERKKIELAER----EQHIKSKLESDMVKIIKDELTKEKDE 2897




 Score = 28.1 bits (61), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 4/51 (7%)

Query: 863  ETYNVISTVYNQLQTLNN--FIKEQYNQLRAKMNE--EEIIPPQITATQKS 909
            ETYN IST +N++    N   +K ++N ++ K+N+  +E++    T T +S
Sbjct: 2333 ETYNSISTNFNKINETQNIDILKNEFNNIKTKINDKVKELVHVDSTLTLES 2383



>EAY08232.1 on XP_001348153  MAEBL  (Adhesin)  [Plasmodium falciparum]
          Length = 2054

 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/150 (38%), Positives = 78/150 (52%), Gaps = 21/150 (14%)

Query: 940  KEKEEEERKKIEEEKKRKEE----EKKRKEE----EEKRKKEEERKRKEEEERKRKEEEE 991
            KE E ++ +K  E++   EE    E+ RK E    EE+ KK+E  KR E+  R  +    
Sbjct: 1061 KENEYDQMEKNVEDETYSEEFGLFEEARKTETGRIEEESKKKEAMKRAEDARRIEEARRA 1120

Query: 992  ERKRREEEERKRKEEEER---KRREEEERRIK--EEKERQRLIEEERRRQEDEARLRKAE 1046
            E  RR EE R R E+  R    RR E+ RRI+     E  + IE  RR  E    LRKAE
Sbjct: 1121 EDARRIEEAR-RAEDARRVEIARRVEDARRIEISRRAEDAKRIEAARRAIEVRRALRKAE 1179

Query: 1047 EERK----RREEEDRKQREMEELRRQEEER 1072
            + R+    RR E +R+   +EE RR E+E+
Sbjct: 1180 DARRIEAARRYENERR---IEEARRYEDEK 1206




 Score = 40.0 bits (92), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/164 (37%), Positives = 88/164 (53%), Gaps = 39/164 (23%)

Query: 934  EEERKRKE--KEEEERKKIEEEKKRKEEEKKRKEEEEKRKKEEERK----RKEEEERK-- 985
            EEE K+KE  K  E+ ++IEE   R+ E+ +R   EE R+ E+ R+    R+ E+ R+  
Sbjct: 1096 EEESKKKEAMKRAEDARRIEE--ARRAEDARRI--EEARRAEDARRVEIARRVEDARRIE 1151

Query: 986  --RKEEEEER---KRREEEERK--RKEEEERK----RREEEERRIKEEKERQRLIEEERR 1034
              R+ E+ +R    RR  E R+  RK E+ R+    RR E ERRI           EE R
Sbjct: 1152 ISRRAEDAKRIEAARRAIEVRRALRKAEDARRIEAARRYENERRI-----------EEAR 1200

Query: 1035 RQEDEARL---RKAEEERK--RREEEDRKQREMEELRRQEEERL 1073
            R EDE R+   ++AEE RK     +   K+R  EE+R+ EE R+
Sbjct: 1201 RYEDEKRIEAVKRAEEVRKDEEEAKRAEKERNNEEIRKFEEARM 1244



>EAY08232.1 on XP_001350082  Rh2b  (Adhesin)  [Plasmodium falciparum]
          Length = 1115

 Score = 34.7 bits (78), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 63/103 (61%), Gaps = 14/103 (13%)

Query: 1002 KRKEEEERKRREEEERRIKEEKERQRLIEEERRRQEDEARLRKAEEERKRREEEDRKQRE 1061
            KR +E+ER ++EEE +R    +E++RL   ER +QE   +L+K EEE +++E+E ++QR 
Sbjct: 600  KR-QEQERLQKEEELKR----QEQERL---EREKQE---QLQK-EEELRKKEQEKQQQRN 647

Query: 1062 MEELRRQEEERL--RLKIQEEMVLDSYDLLMQKLQTPQPTNDN 1102
            ++EL  Q++  +     ++ + +L+  D    +L  P  + DN
Sbjct: 648  IQELEEQKKPEIINEALVKGDKILEGSDQRNMELSKPNVSMDN 690




 Score = 28.1 bits (61), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 4/51 (7%)

Query: 863 ETYNVISTVYNQLQTLNN--FIKEQYNQLRAKMNE--EEIIPPQITATQKS 909
           ETYN IST +N++    N   +K ++N ++ K+N+  +E++    T T +S
Sbjct: 194 ETYNSISTNFNKINETQNIDILKNEFNNIKTKINDKVKELVHVDSTLTLES 244



>EAY08232.1 on XP_954179  TashAT2  (Establishment)  [Theileria annulata]
          Length = 1161

 Score = 33.9 bits (76), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 63/130 (48%), Gaps = 10/130 (7%)

Query: 949  KIEEEKKRKEEEKKRKEEEEKRKKEEER-KRKEEEERKRKEEEEERKRREEEERKRKEEE 1007
            ++ ++ ++ E  K+R     K K E E+ KRK    RK K E E+ KR+    RK+K E 
Sbjct: 421  EVTKKHEKPEVPKRRPGRPRKHKPEPEQPKRKRGRPRKHKPEPEQPKRKRGRPRKQKPEP 480

Query: 1008 ERKRREEEERRIKEEKERQRLIE------EERRRQED-EARLRKAEEERKRREEEDRKQR 1060
            E    EE  +   +E+E +  I+      E+R    D     R AE+E +RR +  R + 
Sbjct: 481  ESDHSEESTQPHPQEQETEDSIKALGPSPEKRPFSFDIYCEDRDAEDELRRRAK--RFRS 538

Query: 1061 EMEELRRQEE 1070
            E  E   QE+
Sbjct: 539  EPLESHEQED 548




 Score = 33.9 bits (76), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 2/72 (2%)

Query: 947  RKKIEEEKKRKEEEKKRKEEEE--KRKKEEERKRKEEEERKRKEEEEERKRREEEERKRK 1004
             +K E  K+R    +K K E E  KRK+   RK K E E+ +++    RK++ E E    
Sbjct: 426  HEKPEVPKRRPGRPRKHKPEPEQPKRKRGRPRKHKPEPEQPKRKRGRPRKQKPEPESDHS 485

Query: 1005 EEEERKRREEEE 1016
            EE  +   +E+E
Sbjct: 486  EESTQPHPQEQE 497




 Score = 30.8 bits (68), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 1/89 (1%)

Query: 985  KRKEEEEERKRREEEERKRKEE-EERKRREEEERRIKEEKERQRLIEEERRRQEDEARLR 1043
            K+ E+ E  KRR    RK K E E+ KR+    R+ K E E+ +      R+Q+ E    
Sbjct: 424  KKHEKPEVPKRRPGRPRKHKPEPEQPKRKRGRPRKHKPEPEQPKRKRGRPRKQKPEPESD 483

Query: 1044 KAEEERKRREEEDRKQREMEELRRQEEER 1072
             +EE  +   +E   +  ++ L    E+R
Sbjct: 484  HSEESTQPHPQEQETEDSIKALGPSPEKR 512



>EAY08232.1 on XP_827769  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 533

 Score = 32.0 bits (71), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 12/91 (13%)

Query: 113 QSSIEALSLYLQNQASSQMVQIESTCLVRELLQVQ--PLALIVDSILERYPNIKWIPKKD 170
           +++ EAL     NQ   Q V  E T   ++L  VQ   +AL V  +L+RYPN+   P+  
Sbjct: 108 KAAAEALKQGEDNQKVKQAVTPELTKTAKQLAAVQLAAIALEVKQLLKRYPNVN--PEAA 165

Query: 171 DYAN--------IATYGQNFIQYVNHVSTKP 193
            Y +         A  GQ   +  N  ++KP
Sbjct: 166 KYQSASPTAAIMAAALGQGDAKATNIDASKP 196



>EAY08232.1 on XP_814930   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 938

 Score = 30.0 bits (66), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 3/63 (4%)

Query: 926 EEKKKKEEEEERKRKEKEEEERKKIEEEKKRKEEEKKRKEEEEKRKKEEERKRKEEEERK 985
           E+KK+K   +   +KE  + E KK   E    E++K   + E+K++  +   +KE  + +
Sbjct: 762 EDKKEKGSGDSEDKKESGDSEDKK---ESGDSEDKKGSGDSEDKKESGDSEDKKESGDSE 818

Query: 986 RKE 988
            K+
Sbjct: 819 DKK 821




 Score = 29.3 bits (64), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 6/71 (8%)

Query: 927 EKKKKEEEEERKRKEKEEEERKKIEEEKKRKEEEKKRKEEEEKRKKEEERKRKE---EEE 983
           E K  +E E++K K   + E KK   E    E++K+  + E+K+   +   +KE    E+
Sbjct: 754 ELKMIKEVEDKKEKGSGDSEDKK---ESGDSEDKKESGDSEDKKGSGDSEDKKESGDSED 810

Query: 984 RKRKEEEEERK 994
           +K   + E++K
Sbjct: 811 KKESGDSEDKK 821




 Score = 28.5 bits (62), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 4/53 (7%)

Query: 923 AGSEEKKKKEEEEERKRKEKEEEERKKIEEEKKRKE----EEKKRKEEEEKRK 971
           +G  E KK+  + E K++  + E++K   + + +KE    E+KK   + E +K
Sbjct: 769 SGDSEDKKESGDSEDKKESGDSEDKKGSGDSEDKKESGDSEDKKESGDSEDKK 821




 Score = 27.3 bits (59), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 15/66 (22%), Positives = 34/66 (51%), Gaps = 3/66 (4%)

Query: 938  KRKEKEEEERKKIEEEKKRKEEEKKRKEEEEKRKKEEERKRKEEEERKRKEEEEERKRRE 997
            K  E ++E+     E+KK   + + +KE  +    E+++   + E++K   + E++K   
Sbjct: 759  KEVEDKKEKGSGDSEDKKESGDSEDKKESGD---SEDKKGSGDSEDKKESGDSEDKKESG 815

Query: 998  EEERKR 1003
            + E K+
Sbjct: 816  DSEDKK 821



>EAY08232.1 on AAO83837  SUB2  (Protease)  [Toxoplasma gondii]
          Length = 255

 Score = 29.3 bits (64), Expect = 1.0,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 47/119 (39%), Gaps = 12/119 (10%)

Query: 902  QITATQKSTLKSIDFTPLTYD------------AGSEEKKKKEEEEERKRKEKEEEERKK 949
            Q TA   S  +   +TP+++             AG E+ +      +R      E  R  
Sbjct: 88   QRTAVSGSKFEREKWTPISFTEKGLFDVINPTIAGDEKDELNWSTHQRIEGRGTEPTRSD 147

Query: 950  IEEEKKRKEEEKKRKEEEEKRKKEEERKRKEEEERKRKEEEEERKRREEEERKRKEEEE 1008
             ++  + K    +R+EE  +  ++E +    E+    KE+E +    EE   +  E +E
Sbjct: 148  SQQRDQAKPRALERREEAGQPPRDEHQDTDVEQAPLIKEDESDSPSVEEPRAQPPENKE 206



>EAY08232.1 on XP_954175  TashAT3  (Establishment)  [Theileria annulata]
          Length = 994

 Score = 29.6 bits (65), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 1/147 (0%)

Query: 915  DFTPLTYDAGSEEKKKKEEEEERKRKEKEEEERKKIEEEKKRKEEEKKRKEEEEKRKKEE 974
            D T +T      E  K+     RK+K + E+ ++K    +K+K E KK      +  K E
Sbjct: 323  DITEVTKKHEQPEVPKRRPGRPRKQKPEPEQPKRKRGRPRKQKYETKKTWLLRPRNMKTE 382

Query: 975  ERKRKEEEERKRKEEEEERKRREEEERKRKEEEERKRREEEERRIKEEKERQRLIEEERR 1034
             +K      RK+K E E+ KR+    RK+K  E +K      R +K E ++  L+   + 
Sbjct: 383  TKKTWLLRPRKQKPEPEQPKRKRGRPRKQK-YETKKTWLLRPRNMKTETKKTWLLRPRKH 441

Query: 1035 RQEDEARLRKAEEERKRREEEDRKQRE 1061
            + E E   RK    RK++ E +    E
Sbjct: 442  KPEPEQPKRKRGRPRKQKPEPESDHSE 468




 Score = 27.7 bits (60), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 44/88 (50%)

Query: 937  RKRKEKEEEERKKIEEEKKRKEEEKKRKEEEEKRKKEEERKRKEEEERKRKEEEEERKRR 996
            RK+K + E+ ++K    +K+K E KK      +  K E +K      RK K E E+ KR+
Sbjct: 392  RKQKPEPEQPKRKRGRPRKQKYETKKTWLLRPRNMKTETKKTWLLRPRKHKPEPEQPKRK 451

Query: 997  EEEERKRKEEEERKRREEEERRIKEEKE 1024
                RK+K E E    EE  +   +E+E
Sbjct: 452  RGRPRKQKPEPESDHSEESTQPHPQEQE 479



>EAY08232.1 on XP_803400  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 483

 Score = 29.3 bits (64), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 35/64 (54%)

Query: 924 GSEEKKKKEEEEERKRKEKEEEERKKIEEEKKRKEEEKKRKEEEEKRKKEEERKRKEEEE 983
           G  E+ KK  +E +K    E+ +++K  +  ++K E +K   + E  KK+EE   KE  +
Sbjct: 419 GKAEETKKTADECKKHTTSEDCKKEKGCDFVEKKPEGEKCFPKVETDKKDEENNGKESSD 478

Query: 984 RKRK 987
           RK K
Sbjct: 479 RKDK 482



>EAY08232.1 on XP_802978   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 340

 Score = 29.3 bits (64), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 40/88 (45%), Gaps = 9/88 (10%)

Query: 976  RKRKEEEERKRKEEEEERKRREEE---ERKRKEEEERKRREEEERRIKEEKERQRLIEEE 1032
            R ++   +R+R ++   ++RR ++   +R R ++   KRR  ++      K+   L    
Sbjct: 251  RAQQSPNKRRRAQQSPNKRRRAQQSPNKRHRAQQSPNKRRRAQQ----SPKQPNSLWAPP 306

Query: 1033 RRRQEDEARLRKAEEERKRREEEDRKQR 1060
             ++ +    LR    ++K      RKQR
Sbjct: 307  TQQMQQHTTLRA--RDKKGSIHRSRKQR 332



>EAY08232.1 on XP_001609667  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1303

 Score = 27.7 bits (60), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 16/49 (32%), Positives = 30/49 (61%)

Query: 932 EEEEERKRKEKEEEERKKIEEEKKRKEEEKKRKEEEEKRKKEEERKRKE 980
           +E  ER++ E+ +  +KK++E KK  EE +K  E  E   +++ ++ KE
Sbjct: 679 QEALERRKGEEIKGVQKKLQEAKKGLEEARKELETGEDLDEDDLKEAKE 727



>EAY08232.1 on XP_001351517  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2193

 Score = 27.3 bits (59), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 12/45 (26%), Positives = 26/45 (57%), Gaps = 1/45 (2%)

Query: 434 IATLSNVYQN-LRNEIQKVENLNDRARLNIICDSIDNYWIKFSDD 477
           + + +N Y++ L+  +Q  +++ +RA  N  CD +  Y+  F+ D
Sbjct: 34  VKSEANQYKDDLKGNLQHAKDMGERASSNKTCDLVKEYYEHFNGD 78




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08240.1 Glycosyl hydrolase family 47 protein
[Trichomonas vaginalis G3]
         (452 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001350415  PfEMP1  (Establishment)  [Plasmodium falciparum]         30   0.31 

>EAY08240.1 on XP_001350415  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3056

 Score = 30.0 bits (66), Expect = 0.31,   Method: Composition-based stats.
 Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 1/66 (1%)

Query: 123 GKLTARKTSNGGTSLADTSTYQLEFIALSMITGDPKYIRLAMKTYNTIWKNT-AGHGLIS 181
           GKL  +      T+  DTS   L+ +  S    + KYI LAMK    +   T  G G ++
Sbjct: 680 GKLFRKYIKKNNTAEQDTSYSSLDELRESWWNTNKKYIWLAMKHGAGMNSTTCCGDGSVT 739

Query: 182 GPYSSC 187
           G  SSC
Sbjct: 740 GSGSSC 745




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08241.1 small GTP-binding protein, putative
[Trichomonas vaginalis G3]
         (184 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BAB40673  Rab5  (Establishment)  [Entamoeba histolytica]               50   6e-09
AAB86482  RabA  (Invasion)  [Entamoeba histolytica]                    49   2e-08
XP_649196  Rab7A  (Establishment)  [Entamoeba histolytica]             41   1e-05
XP_845634  VSG  (Establishment)  [Trypanosoma brucei]                  27   0.48 
XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 25   4.4  
XP_001352242  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   7.1  
XP_001350796  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   8.6  

>EAY08241.1 on BAB40673  Rab5  (Establishment)  [Entamoeba histolytica]
          Length = 195

 Score = 50.1 bits (118), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 75/165 (45%), Gaps = 16/165 (9%)

Query: 8   ILMLGADYYGKLAITLRFVKGSDDEMIPTLEDT-----FQKNISVDGETFVCETTVTPNG 62
           I++LG    GK +I LR  K   DE     E+T       K + VDGET   E   T   
Sbjct: 11  IVLLGDSSVGKSSIVLRVCK---DEYKEFQENTIGAAFLTKTLIVDGETIKFEIWDTAGQ 67

Query: 63  EDAEALILHLIKQSDAFGIVYSVDDKFTFDYISKLYDDIVRIKKTKNPPCVIF--ANKCE 120
           E   +L     + S+A  +VY +    +F    K  D++    +      +IF   NKC+
Sbjct: 68  ERYHSLTPMYYRGSNAALVVYDITSDSSFIQAKKWIDEL----RGSGNEAIIFLVGNKCD 123

Query: 121 LPAPHAVPIEDAKAKSSRSWNNTEIIEVSKNQNDNINKGFEKICR 165
           L     +  E+A+   +RS  + + IE S   N N+N+ F++I R
Sbjct: 124 LDNSRVITKEEAEG-YARSL-SIDYIETSAKANINVNELFDQIAR 166



>EAY08241.1 on AAB86482  RabA  (Invasion)  [Entamoeba histolytica]
          Length = 219

 Score = 49.3 bits (116), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 4/159 (2%)

Query: 10  MLGADYYGKLAITLRFVKGS--DDEMIPTLEDTFQKNISVDGETFVCETTVTPNGEDAEA 67
           ++G    GK A+  RF  G+  +D       +T  K++++DG+ +  +   T   E   +
Sbjct: 30  LIGDVGVGKTALIQRFCFGTYTEDYDATIGIETCDKSVNLDGKMYQLQLWDTAGQEKYHS 89

Query: 68  LILHLIKQSDAFGIVYSVDDKFTFDYISKLYDDIVR-IKKTKNPPCVIFANKCELPAPHA 126
           L+    K      +V+ +D + +FD+     D     I     PP ++  NKC+L    +
Sbjct: 90  LVRLYFKDIKGVLLVFQIDRQESFDHCKDWLDLFYSSISSGFTPPVLLVGNKCDLIGS-S 148

Query: 127 VPIEDAKAKSSRSWNNTEIIEVSKNQNDNINKGFEKICR 165
             +         S N  E IE S  +N N+ + F ++ R
Sbjct: 149 TRVSKESVDRFVSENGLEYIETSSKENTNVQEAFSQLLR 187



>EAY08241.1 on XP_649196  Rab7A  (Establishment)  [Entamoeba histolytica]
          Length = 206

 Score = 41.2 bits (95), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 73/178 (41%), Gaps = 13/178 (7%)

Query: 5   IIHILMLGADYYGKLAITLRFV--KGSDDEMIPTLEDTFQKNISVDGETFVCETTVTPNG 62
           ++ +++LG    GK ++  +FV  K S         D   K++ VD      +   T   
Sbjct: 7   LLKVIILGDSGVGKTSLMNQFVNHKYSSVYKATIGADFLTKDLVVDNHEVTMQIWDTAGN 66

Query: 63  EDAEALILHLIKQSDAFGIVYSVDDKFTFDYISKLYDDIVRIKKTKNP---PCVIFANKC 119
           E  ++L +   + +D   + Y V+D  TF+ ++   ++ +     KN    P V+  NK 
Sbjct: 67  ERFQSLGVAFYRGADCCALCYDVNDPKTFESLNNWREEFLVQASPKNQDQFPFVVLGNKV 126

Query: 120 ELPAPHAVPIEDAKAKSSRSWN----NTEIIEVSKNQNDNINKGFEKICRLALKQNNS 173
           +       P  DA  K +  W     N    E S     N++  F+ I + A+ Q  +
Sbjct: 127 D--TYEGSP--DAIKKKAEQWCSEHFNIPFFETSAKNATNVDAAFQSIAQAAIAQKGT 180



>EAY08241.1 on XP_845634  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 461

 Score = 27.3 bits (59), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 14/38 (36%), Positives = 21/38 (55%)

Query: 65  AEALILHLIKQSDAFGIVYSVDDKFTFDYISKLYDDIV 102
           A+A+I  LIKQ+DA    Y    K   +  +K  +DI+
Sbjct: 128 AQAIITQLIKQTDAIQEKYDAAQKTATESHAKAIEDIL 165



>EAY08241.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 24.6 bits (52), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 8/75 (10%)

Query: 14   DYYGKLAITLRFVKGSDDE--MIPTLEDTFQKNISVDGETFVCETTVTPNGEDAEALILH 71
            D Y  + +  +++K  +D   ++ +L    +KN SV          +  N ED + L+ H
Sbjct: 1868 DSYNYITVKKQYIKTIEDVKFLLDSLNTIEEKNKSV------ANLEICTNKEDIKNLLKH 1921

Query: 72   LIKQSDAFGIVYSVD 86
            +IK ++  GI+   D
Sbjct: 1922 VIKLANFSGIIVMSD 1936



>EAY08241.1 on XP_001352242  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2264

 Score = 23.9 bits (50), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 15/56 (26%), Positives = 21/56 (37%), Gaps = 9/56 (16%)

Query: 50   ETFVCETTVTPNGEDAEALILHLIKQSDAFGIVYSVDDKFTFDYISKLYDDIVRIK 105
            E  VC  T   N    E   +  +K         + DDK  FD +   Y D  ++K
Sbjct: 1156 EGMVCALTYKENSSGGEGKTIEKVK---------TADDKDLFDTLKGKYSDYEKVK 1202



>EAY08241.1 on XP_001350796  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2646

 Score = 23.9 bits (50), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 5/66 (7%)

Query: 118  KCELPAPHAVPIEDAKAKSSRSWNNTEIIEVSKNQNDNINKGFEKICR-LALKQNNSKDS 176
            KC++   H VP++D   +  R W         K Q+   +K F +  + +   Q  +KDS
Sbjct: 1013 KCDV---HDVPVDDYIPQRLR-WMTEWAEWFCKAQSQEYDKLFMQCAKCMGNGQGCTKDS 1068

Query: 177  SNGYCE 182
            S+G CE
Sbjct: 1069 SDGECE 1074




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08249.1 SH3 domain containing protein [Trichomonas
vaginalis G3]
         (1521 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAL38221  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   28   7.1  
AAL38222  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   28   7.1  
AAL38218  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   28   7.1  
AAL38220  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   28   7.2  
AAL38219  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   28   7.2  
XP_001349515  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   8.4  

>EAY08249.1 on AAL38221  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2965

 Score = 27.7 bits (60), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 9/44 (20%)

Query: 762  FANAEIFRNEKIRRGLLPEIIKELTKEDYKQVFSEKILPLATTI 805
            F NA+I +NEKI+   L EIIK L       +  E+I+    +I
Sbjct: 2338 FINADILQNEKIK---LEEIIKNLD------ILDEQIMTYHNSI 2372



>EAY08249.1 on AAL38222  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2976

 Score = 27.7 bits (60), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 9/44 (20%)

Query: 762  FANAEIFRNEKIRRGLLPEIIKELTKEDYKQVFSEKILPLATTI 805
            F NA+I +NEKI+   L EIIK L       +  E+I+    +I
Sbjct: 2345 FINADILQNEKIK---LEEIIKNLD------ILDEQIMTYHNSI 2379



>EAY08249.1 on AAL38218  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2977

 Score = 27.7 bits (60), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 9/44 (20%)

Query: 762  FANAEIFRNEKIRRGLLPEIIKELTKEDYKQVFSEKILPLATTI 805
            F NA+I +NEKI+   L EIIK L       +  E+I+    +I
Sbjct: 2342 FINADILQNEKIK---LEEIIKNLD------ILDEQIMTYHNSI 2376



>EAY08249.1 on AAL38220  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2957

 Score = 27.7 bits (60), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 9/44 (20%)

Query: 762  FANAEIFRNEKIRRGLLPEIIKELTKEDYKQVFSEKILPLATTI 805
            F NA+I +NEKI+   L EIIK L       +  E+I+    +I
Sbjct: 2332 FINADILQNEKIK---LEEIIKNLD------ILDEQIMTYHNSI 2366



>EAY08249.1 on AAL38219  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2969

 Score = 27.7 bits (60), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 9/44 (20%)

Query: 762  FANAEIFRNEKIRRGLLPEIIKELTKEDYKQVFSEKILPLATTI 805
            F NA+I +NEKI+   L EIIK L       +  E+I+    +I
Sbjct: 2334 FINADILQNEKIK---LEEIIKNLD------ILDEQIMTYHNSI 2368



>EAY08249.1 on XP_001349515  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 1711

 Score = 27.3 bits (59), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 11/37 (29%), Positives = 21/37 (56%)

Query: 1220 KFIGGNFDECHKNKFFVYRRGGYFDNGQMLSYIKQKF 1256
            ++IG + D+ + N   V++ G +  NGQ     +Q+F
Sbjct: 965  RYIGNDLDKVNNNITAVFQNGDHIPNGQKTDRQRQEF 1001




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08250.1 hypothetical protein TVAG_404180 [Trichomonas
vaginalis G3]
         (245 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001349036  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   2.6  

>EAY08250.1 on XP_001349036  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2192

 Score = 26.2 bits (56), Expect = 2.6,   Method: Composition-based stats.
 Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 13/59 (22%)

Query: 55  FDASIYHQYGEIKVSNMNTSYNRINMH---------AAYVIDTQLGSVNFTTVSNSSSS 104
           +D  I   YGE+K    N  Y  +N              V DTQ G +NF  V +SS+S
Sbjct: 432 YDGYIKKFYGELK----NHGYGDVNNFLEKLSDEDVCKKVQDTQGGKINFKNVKSSSAS 486




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08251.1 transmembrane protein, putative [Trichomonas
vaginalis G3]
         (187 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_965999  PfEMP1  (Establishment)  [Plasmodium falciparum]            26   2.2  
XP_001351513  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   3.4  
XP_001351514  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   4.1  

>EAY08251.1 on XP_965999  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 1325

 Score = 25.8 bits (55), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 26/112 (23%), Positives = 51/112 (45%), Gaps = 12/112 (10%)

Query: 17  KVNARLIPAKDLHTSYAEILSNADPTKFEDLKKQLLLVIDTAEAEYSLLNQEVSILNS-- 74
           K  A  I    L   Y++   + DP   + + ++L  + + +E   ++LN+E+  +N+  
Sbjct: 275 KTEADGIGISSLILPYSKCGRDTDPPVVDYIPQRLRWMSEWSEYFCNVLNKEIDEMNNQC 334

Query: 75  ----MIPQWNNEITAANSQIDKLKEEITVLE----KEKQDVDEKLAKYNELM 118
               M  + NN+      +  K KE+  + +    K K + D++  KY EL 
Sbjct: 335 KDCEMSRRCNNDTEG--EKCKKCKEQCQIFKELVSKWKNEFDKQSMKYKELY 384



>EAY08251.1 on XP_001351513  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2152

 Score = 25.0 bits (53), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 11/35 (31%), Positives = 21/35 (60%)

Query: 83  ITAANSQIDKLKEEITVLEKEKQDVDEKLAKYNEL 117
             A N  ID ++++    +K+KQ  DE++ KY ++
Sbjct: 382 FFACNPYIDWIEKQKEQFDKQKQKYDEEIKKYTKV 416



>EAY08251.1 on XP_001351514  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2201

 Score = 24.6 bits (52), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 11/33 (33%), Positives = 21/33 (63%)

Query: 85  AANSQIDKLKEEITVLEKEKQDVDEKLAKYNEL 117
           A N  ID ++++    +K+KQ  DE++ KY ++
Sbjct: 384 ACNPYIDWIEKQKEQFDKQKQKYDEEIKKYTKV 416




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08252.1 iron superoxide dismutase, putative
[Trichomonas vaginalis G3]
         (217 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08255.1 Kelch motif family protein [Trichomonas
vaginalis G3]
         (387 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08256.1 hypothetical protein TVAG_404240 [Trichomonas
vaginalis G3]
         (404 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_814492   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.19 
XP_813421   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   1.1  
XP_812988   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   1.4  
XP_819012   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   1.5  
XP_817615   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.9  
XP_815842   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.6  
XP_818403   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.9  
XP_806427   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   4.2  
XP_803409  VSG  (Establishment)  [Trypanosoma brucei]                  26   4.4  
XP_803103   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   5.4  
XP_808081   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   5.5  
XP_809719   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   5.7  
XP_808176   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   7.0  
XP_816729   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   7.3  
XP_820300   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   9.4  

>EAY08256.1 on XP_814492   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 923

 Score = 30.4 bits (67), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 15/70 (21%)

Query: 262 NIPSQLQTPTIPANKSENRQLESKDKETNFTQSGKTTATNNSLEIQVMGTNDMKVEVSKP 321
            I +QL T T  AN+ +    ++KDK T F + G TTA               KV+VS+P
Sbjct: 123 GIATQLVT-TAKANEPKEVLKDAKDK-TQFLEEG-TTAIKK------------KVDVSRP 167

Query: 322 PLIIIENEIY 331
             ++ ENEIY
Sbjct: 168 TTVVKENEIY 177



>EAY08256.1 on XP_813421   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 746

 Score = 28.1 bits (61), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 57/157 (36%), Gaps = 24/157 (15%)

Query: 8   GYYSYYSDSYGEYYSDDETKSANKTAKKENKDSNNEK-SKSNNDSTKSKVQQQQVPNESN 66
           G   + SD++ E    DE    N T K  +   NN+  +    D  K +    + P    
Sbjct: 524 GLVGFLSDNFSENTWRDEYLGVNATVKGNDNGKNNKGWAAKAEDGVKFQGAWAEWPVGEQ 583

Query: 67  NENSLENEHSNYDSKNEAPKSERRISVSFSQEAIDGGVP---VKHDNDDLDAWASANSGK 123
            EN L +  +NY+    A       +VS   E  +G +P   VK D D            
Sbjct: 584 GENQLYH-FANYNFTLVA-------TVSIDGEPTEGNIPLLGVKMDGD------------ 623

Query: 124 SNPYDVEKSSNPEPEDLLPFLSATNPKDPEQKQLPET 160
             P  +  S N E +  L     TN KD      PET
Sbjct: 624 GYPILLGLSYNKEKKWQLLCGGETNSKDLSVFWGPET 660



>EAY08256.1 on XP_812988   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 889

 Score = 27.7 bits (60), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 10/22 (45%), Positives = 17/22 (77%)

Query: 310 GTNDMKVEVSKPPLIIIENEIY 331
           G+   KV+VS+P +++ EN+IY
Sbjct: 151 GSGGNKVDVSRPTIVVKENDIY 172



>EAY08256.1 on XP_819012   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 918

 Score = 27.7 bits (60), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 10/26 (38%), Positives = 20/26 (76%)

Query: 306 IQVMGTNDMKVEVSKPPLIIIENEIY 331
           ++ +G+ + KV+VS+P  ++ EN+IY
Sbjct: 149 LEKVGSEEKKVDVSRPTTVVKENDIY 174



>EAY08256.1 on XP_817615   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 860

 Score = 27.3 bits (59), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 10/20 (50%), Positives = 16/20 (80%)

Query: 312 NDMKVEVSKPPLIIIENEIY 331
           ++MKV VS+P  ++ EN+IY
Sbjct: 238 SEMKVYVSRPTTVVKENDIY 257



>EAY08256.1 on XP_815842   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 894

 Score = 26.9 bits (58), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 9/17 (52%), Positives = 15/17 (88%)

Query: 315 KVEVSKPPLIIIENEIY 331
           KV+VS+P +++ EN+IY
Sbjct: 156 KVDVSRPTIVVKENDIY 172



>EAY08256.1 on XP_818403   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 957

 Score = 26.6 bits (57), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 10/17 (58%), Positives = 13/17 (76%)

Query: 315 KVEVSKPPLIIIENEIY 331
           KV VS+P  ++ ENEIY
Sbjct: 184 KVHVSRPTTVVKENEIY 200



>EAY08256.1 on XP_806427   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 886

 Score = 26.2 bits (56), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 16/73 (21%)

Query: 259 WMKNIPSQLQTPTIPANKSENRQLESKDKETNFTQSGKTTATNNSLEIQVMGTNDMKVEV 318
           +   + SQL T T  ANK E    E KD  T F +             +V      KV V
Sbjct: 118 FFTGVASQLLTTT-TANKPEEVLNEVKD--TQFLE-------------KVGSAEKKKVNV 161

Query: 319 SKPPLIIIENEIY 331
           S+P  ++ EN+IY
Sbjct: 162 SRPTTVVKENDIY 174



>EAY08256.1 on XP_803409  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 501

 Score = 26.2 bits (56), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 5/62 (8%)

Query: 28  SANKTAKKENKDSNNEKSKSNNDSTKSKVQQQQVPNESNNENSLE-NEHSNYDS-KNEAP 85
           +A  TA +E K  N   S+    + K++  Q+Q+ N   NE     NE+  YD  K E P
Sbjct: 395 AATLTATRELKSEN---SRLKETTAKAEKTQEQICNAIQNEKDCGNNENCKYDKDKTEGP 451

Query: 86  KS 87
           K 
Sbjct: 452 KC 453



>EAY08256.1 on XP_803103   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 531

 Score = 25.8 bits (55), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 14/70 (20%)

Query: 262 NIPSQLQTPTIPANKSENRQLESKDKETNFTQSGKTTATNNSLEIQVMGTNDMKVEVSKP 321
            I SQ+ T    A K E    E+KDK    TQ  +  A+++S +         KV+VS+P
Sbjct: 80  GIASQIITKE-AAKKLEGVLKETKDK----TQFLEEVASSSSRK---------KVDVSRP 125

Query: 322 PLIIIENEIY 331
             ++ E EIY
Sbjct: 126 TAVVKEREIY 135



>EAY08256.1 on XP_808081   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 893

 Score = 25.8 bits (55), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 4/80 (5%)

Query: 2   TDKEYSGYYSYYSDSYGEYYSDDETKSANKTAKKENKDSNNEK---SKSNNDSTKSKVQQ 58
           T K   G   + SD++ E    DE    N T +K+   + N +   +   +D  K     
Sbjct: 494 TVKITDGLVGFLSDNFSESTWSDEYLGVNATVRKKEGAAKNTRETGATKTSDGVKFHGAW 553

Query: 59  QQVPNESNNENSLENEHSNY 78
            + P  S  EN L +  +NY
Sbjct: 554 AEWPVGSQGENQLYH-FANY 572




 Score = 25.4 bits (54), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 21/110 (19%)

Query: 228 ESSNQEENPSSPIVKDRGINL-----SLEREMSDERWMKNIPSQLQTPTIPANKSENRQL 282
           E     E+  +P +   GI++     + E +M+D      I SQL T T+   K +N  +
Sbjct: 83  EGGVTVESLGAPSLLKVGIDVFAVAEAKETKMADGS-FTGIASQLLTETV--KKKDNTPV 139

Query: 283 E-SKDKETNFTQSGKTTATNNSLEIQVMGTNDMKVEVSKPPLIIIENEIY 331
           E  KD  T      K+T+ N+            KV+VS+P  I+  N+IY
Sbjct: 140 EIMKDANTKTQFLEKSTSPNS------------KVDVSRPTTIVKGNDIY 177



>EAY08256.1 on XP_809719   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 844

 Score = 25.8 bits (55), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 16/72 (22%)

Query: 260 MKNIPSQLQTPTIPANKSENRQLESKDKETNFTQSGKTTATNNSLEIQVMGTNDMKVEVS 319
              I SQL T T  AN+ E    + KD  T F +             +V  T + +V+VS
Sbjct: 116 FAGIASQLVT-TAKANEPEEVVKDVKD--TQFLK-------------EVTSTGEKEVDVS 159

Query: 320 KPPLIIIENEIY 331
           +P  ++ EN+IY
Sbjct: 160 QPTTVVKENDIY 171



>EAY08256.1 on XP_808176   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 889

 Score = 25.4 bits (54), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 10/25 (40%), Positives = 17/25 (68%)

Query: 307 QVMGTNDMKVEVSKPPLIIIENEIY 331
           +V  T   +V+VS+P  ++ EN+IY
Sbjct: 151 EVTSTEKKRVDVSRPTTVVKENDIY 175



>EAY08256.1 on XP_816729   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 890

 Score = 25.4 bits (54), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 9/17 (52%), Positives = 14/17 (82%)

Query: 315 KVEVSKPPLIIIENEIY 331
           KV VS+P +++ EN+IY
Sbjct: 160 KVNVSRPTVVVEENDIY 176



>EAY08256.1 on XP_820300   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 660

 Score = 25.0 bits (53), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 9/22 (40%), Positives = 15/22 (68%)

Query: 310 GTNDMKVEVSKPPLIIIENEIY 331
           G   M+V+VS+P  ++  N+IY
Sbjct: 157 GKEKMRVDVSRPTTVVEGNDIY 178




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08263.1 hypothetical protein TVAG_404310 [Trichomonas
vaginalis G3]
         (114 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_845634  VSG  (Establishment)  [Trypanosoma brucei]                  24   2.6  
XP_815234   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   4.4  
XP_812850   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   4.4  
XP_817996   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   5.8  

>EAY08263.1 on XP_845634  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 461

 Score = 23.9 bits (50), Expect = 2.6,   Method: Composition-based stats.
 Identities = 25/86 (29%), Positives = 34/86 (39%), Gaps = 9/86 (10%)

Query: 22  VNSDDDSAFFNLDFGGS-STFGKQNNNRSGT-------MGGFVRNDWQNRDTTIAAAAKA 73
           +  D DS +   DFGGS ++ G  +N  S         M     N      T   +A   
Sbjct: 168 IYGDKDSKYTEGDFGGSRNSCGPTSNGNSAAGKNLLDDMICLCTNKAAATTTECGSATAP 227

Query: 74  TTDPSANCSRQCDTCMFSFLCKSSFK 99
             D + N  +Q  T + S LCKS  K
Sbjct: 228 QVDGAGNTGQQAITHVIS-LCKSPAK 252



>EAY08263.1 on XP_815234   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1032

 Score = 23.5 bits (49), Expect = 4.4,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 20/27 (74%), Gaps = 2/27 (7%)

Query: 39 STFGKQNNNRSGTM--GGFVRNDWQNR 63
          +T+GK+ N+R+GT+  GG   +D +N+
Sbjct: 61 ATYGKEGNSRNGTIFEGGNSFSDAENK 87



>EAY08263.1 on XP_812850   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1032

 Score = 23.5 bits (49), Expect = 4.4,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 20/27 (74%), Gaps = 2/27 (7%)

Query: 39 STFGKQNNNRSGTM--GGFVRNDWQNR 63
          +T+GK+ N+R+GT+  GG   +D +N+
Sbjct: 61 ATYGKEGNSRNGTIFEGGNSFSDAENK 87



>EAY08263.1 on XP_817996   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 792

 Score = 23.1 bits (48), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 9/31 (29%), Positives = 16/31 (51%)

Query: 38  SSTFGKQNNNRSGTMGGFVRNDWQNRDTTIA 68
           S  +G +N N+ G   GF+    ++RD  + 
Sbjct: 310 SRVWGNKNGNKKGVGNGFITATIEDRDVMLV 340




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08268.1 hypothetical protein TVAG_404360 [Trichomonas
vaginalis G3]
         (506 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_803061   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   6.3  

>EAY08268.1 on XP_803061   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 657

 Score = 25.8 bits (55), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 3/64 (4%)

Query: 163 ISEEEFRNVMTLFQQSVTPKVEANEEIRPFYE---GDINPTDFNQISQILQTKNIKSNEL 219
           +S++E     +L  +S        EE+   YE   GD   T F  +S +L  +  +  E+
Sbjct: 425 VSDDEDAAASSLLYRSGKDGDNKKEELIALYEKKKGDEKETSFGMVSVLLTAQLKRVKEV 484

Query: 220 FLSW 223
             +W
Sbjct: 485 LTTW 488




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08270.1 ankyrin repeat protein, putative [Trichomonas
vaginalis G3]
         (209 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_845142  VSG  (Establishment)  [Trypanosoma brucei]                  27   0.82 
XP_001349740  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   3.4  
XP_819383   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   6.3  

>EAY08270.1 on XP_845142  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 481

 Score = 26.9 bits (58), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 5/60 (8%)

Query: 11  DVSIKDHFDSTPLHFAAYKNNTKMVEFLISHGANIKAVDNHKRTPLHSAGETLSIESAEI 70
           + S+K+  D  P  +A  KN   ++E  +SHG + K+    +R  L +A +   I++AE+
Sbjct: 84  NASMKEAADGKPSKYAFLKN---VLE--VSHGQDKKSYAEVRRRQLTTAAKRKLIQAAEV 138



>EAY08270.1 on XP_001349740  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3346

 Score = 25.4 bits (54), Expect = 3.4,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 5/91 (5%)

Query: 36   EFLISHGANIKAVDNHKRTPLHSAGETLSI---ESAEILLSHGLDINAQDDVGYTILNYS 92
            +++ S   N+   D  K  P++  G  L     E   I   H  D+N+ +++ Y I N S
Sbjct: 3081 QYIQSEPLNVPQYDVLKELPMNIVGNVLDDGINEKPFITSIHDRDLNSGEEISYNI-NMS 3139

Query: 93   TES-NSEKLAEFAIKHGADINIRSKQGTTPL 122
            T S +  K     +  G D+   S  G  P+
Sbjct: 3140 TNSMDDPKYVSNNVYSGIDLINDSLSGGKPI 3170



>EAY08270.1 on XP_819383   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 753

 Score = 24.3 bits (51), Expect = 6.3,   Method: Composition-based stats.
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 6/52 (11%)

Query: 58  SAGETLSIESAEILLSHGLDINAQDDVGYTILNYSTESNSEKLAEFAIKHGA 109
           S G  + +E   I+ S  L   + +DV Y+++ YST+S S     +A+  GA
Sbjct: 284 SGGSCVLMEDGTIVFS--LMAKSGNDVVYSMIIYSTDSGS----TWALPEGA 329




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08274.1 hypothetical protein TVAG_401280 [Trichomonas
vaginalis G3]
         (149 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_821137   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   2.4  
AAL38218  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   25   2.7  
AAL38220  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   25   2.7  
AAL38221  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   25   2.7  
AAL38222  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   25   2.8  
AAL38219  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   25   2.8  
XP_812607   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   4.3  
XP_813237   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   4.7  

>EAY08274.1 on XP_821137   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 956

 Score = 25.0 bits (53), Expect = 2.4,   Method: Composition-based stats.
 Identities = 8/14 (57%), Positives = 11/14 (78%)

Query: 41  WEYDKNHKTLSRAV 54
           W Y+K HK+L+R V
Sbjct: 240 WNYNKQHKSLARLV 253



>EAY08274.1 on AAL38218  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2977

 Score = 24.6 bits (52), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 4/47 (8%)

Query: 95   NRIDEL----LKDKELLHRYGSEKFDISPPEKKKKEKKEKKVEEKKE 137
            N IDE+    ++   L+ +Y SE F  +    + KE KEK ++E+ +
Sbjct: 1986 NNIDEIYNVFIQSYNLIQKYSSEIFSSTLNYIQTKEIKEKSIKEQNQ 2032



>EAY08274.1 on AAL38220  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2957

 Score = 24.6 bits (52), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 4/47 (8%)

Query: 95   NRIDEL----LKDKELLHRYGSEKFDISPPEKKKKEKKEKKVEEKKE 137
            N IDE+    ++   L+ +Y SE F  +    + KE KEK ++E+ +
Sbjct: 1976 NNIDEIYNVFIQSYNLIQKYSSEIFSSTLNYIQTKEIKEKSIKEQNQ 2022



>EAY08274.1 on AAL38221  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2965

 Score = 24.6 bits (52), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 4/47 (8%)

Query: 95   NRIDEL----LKDKELLHRYGSEKFDISPPEKKKKEKKEKKVEEKKE 137
            N IDE+    ++   L+ +Y SE F  +    + KE KEK ++E+ +
Sbjct: 1982 NNIDEIYNVFIQSYNLIQKYSSEIFSSTLNYIQTKEIKEKSIKEQNQ 2028



>EAY08274.1 on AAL38222  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2976

 Score = 24.6 bits (52), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 4/47 (8%)

Query: 95   NRIDEL----LKDKELLHRYGSEKFDISPPEKKKKEKKEKKVEEKKE 137
            N IDE+    ++   L+ +Y SE F  +    + KE KEK ++E+ +
Sbjct: 1989 NNIDEIYNVFIQSYNLIQKYSSEIFSSTLNYIQTKEIKEKSIKEQNQ 2035



>EAY08274.1 on AAL38219  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2969

 Score = 24.6 bits (52), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 4/47 (8%)

Query: 95   NRIDEL----LKDKELLHRYGSEKFDISPPEKKKKEKKEKKVEEKKE 137
            N IDE+    ++   L+ +Y SE F  +    + KE KEK ++E+ +
Sbjct: 1978 NNIDEIYNVFIQSYNLIQKYSSEIFSSTLNYIQTKEIKEKSIKEQNQ 2024



>EAY08274.1 on XP_812607   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 957

 Score = 24.3 bits (51), Expect = 4.3,   Method: Composition-based stats.
 Identities = 8/14 (57%), Positives = 11/14 (78%)

Query: 41  WEYDKNHKTLSRAV 54
           W Y+K HK+L+R V
Sbjct: 237 WNYNKQHKSLARLV 250



>EAY08274.1 on XP_813237   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1496

 Score = 23.9 bits (50), Expect = 4.7,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 17/35 (48%)

Query: 112 SEKFDISPPEKKKKEKKEKKVEEKKEPEPVPEKNK 146
           + K  I PP+  + +  E K  E K  EP P + K
Sbjct: 687 ANKVTIPPPKSAEPKPAEPKSAEPKPAEPKPAEPK 721




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08279.1 hypothetical protein TVAG_401330 [Trichomonas
vaginalis G3]
         (220 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001350798  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   1.5  

>EAY08279.1 on XP_001350798  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2359

 Score = 26.6 bits (57), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 18/36 (50%)

Query: 111  KKREQAIRQYNQTKAQASKTAAQITSATTNCQTANT 146
            +K+E+   QYN    Q +K   +  +A   C T NT
Sbjct: 1453 RKKEEFTEQYNAYGGQKTKCQTESETAKEFCGTLNT 1488




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08283.1 Variant SH3 domain containing protein
[Trichomonas vaginalis G3]
         (427 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_844693  VSG  (Establishment)  [Trypanosoma brucei]                  28   1.5  

>EAY08283.1 on XP_844693  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 516

 Score = 27.7 bits (60), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 14/40 (35%), Positives = 21/40 (52%)

Query: 342 PIENWVLASSNKTFPEGYVPRNNIKVLNKKIALSLKQLAY 381
           P+  W      +T PE    R++  +LNKK ALS+   A+
Sbjct: 472 PVCGWRKGKDGETEPEKEKCRSSSFLLNKKFALSMVSAAF 511




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08284.1 hypothetical protein TVAG_401380 [Trichomonas
vaginalis G3]
         (109 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001350798  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   1.0  
XP_827084  VSG  (Establishment)  [Trypanosoma brucei]                  23   3.3  
XP_001609618  variant erythrocyte surface antigen-1, alpha subun...    23   3.8  
XP_001349437  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   4.7  
XP_001609751  variant erythrocyte surface antigen-1, alpha subun...    23   5.9  
XP_966305  PfEMP1  (Establishment)  [Plasmodium falciparum]            23   6.3  
XP_001611147  variant erythrocyte surface antigen-1, alpha subun...    23   6.5  
XP_001610196  variant erythrocyte surface antigen-1, alpha subun...    23   6.6  
XP_001609533  variant erythrocyte surface antigen-1, alpha subun...    22   8.3  

>EAY08284.1 on XP_001350798  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2359

 Score = 25.4 bits (54), Expect = 1.0,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 23/39 (58%)

Query: 2  NFQSLQDRQELIEEIFDALEELILGRRNGSTDEIEDLLS 40
          ++ S +D +EL+++I   + + +    NG  DE+E  LS
Sbjct: 9  DYSSAKDAKELLDKIGQQVHDKVKSESNGFKDELEGSLS 47



>EAY08284.1 on XP_827084  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 487

 Score = 23.5 bits (49), Expect = 3.3,   Method: Composition-based stats.
 Identities = 8/20 (40%), Positives = 14/20 (70%)

Query: 55 FSNLPRTTKEWSSLSPEEKN 74
          FS+L R TK+W  ++ + K+
Sbjct: 76 FSDLERATKDWEEIADDRKH 95



>EAY08284.1 on XP_001609618  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1325

 Score = 23.5 bits (49), Expect = 3.8,   Method: Composition-based stats.
 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 8/56 (14%)

Query: 61  TTKEWSSLSPEEKNKIR---SRLLELLEEKKAQLT----IEISNLDRIVQENAVER 109
           T K+   + P  KNKI    +++LE+L+E + QL      E SN+D     N  E+
Sbjct: 774 TNKDGKEVDPG-KNKISEAINKVLEMLKEMEKQLKEVLEKEQSNMDENTNLNGHEK 828



>EAY08284.1 on XP_001349437  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2231

 Score = 23.1 bits (48), Expect = 4.7,   Method: Composition-based stats.
 Identities = 13/30 (43%), Positives = 14/30 (46%)

Query: 53   NKFSNLPRTTKEWSSLSPEEKNKIRSRLLE 82
            NK  N  +   EW     EE  KIR R LE
Sbjct: 1528 NKCQNKCKCVGEWIPKKREEWEKIRKRFLE 1557



>EAY08284.1 on XP_001609751  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1298

 Score = 23.1 bits (48), Expect = 5.9,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 6/96 (6%)

Query: 7   QDRQELIEEIFDALEELILGRRNGSTDEIEDLLSNMNNNFLTTGP-----NNKFSNLPRT 61
            DR   ++E+ + L +L LG     + +++DLL  + +  +  G        K       
Sbjct: 606 HDRNYRVKEMGNKLNKLPLGSEISDSCKLKDLLEKIGDVVVQLGNAQEALEGKDKKAIEG 665

Query: 62  TKEWSSLSPEEKNKIRSRLLELLEEKKAQLTIEISN 97
            KE   ++ E  +  ++ L E L+E K +L  E++N
Sbjct: 666 VKEALQVAKEGLDTAKNGLDEELKEAKDKLG-ELTN 700



>EAY08284.1 on XP_966305  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3954

 Score = 23.1 bits (48), Expect = 6.3,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 33   DEIEDLLSNMNNNFLTTGPNNKFSNLPRTTKEWSSLSPEEKNKIRS 78
            D ++DL  N ++N  T   + K+ N      +W  ++ +  N  RS
Sbjct: 1695 DIVKDLFENKDDNKFTEACSTKYKNGKEKYTQWKCIN-DSSNTTRS 1739



>EAY08284.1 on XP_001611147  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1304

 Score = 22.7 bits (47), Expect = 6.5,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 38/91 (41%), Gaps = 5/91 (5%)

Query: 7   QDRQELIEEIFDALEELILGRRNGSTDEIEDLLSNMNNNFLTTGP-----NNKFSNLPRT 61
            DR++ + E+ + L +L LG       +I+D+L  +    +  G        K +     
Sbjct: 630 HDRKKRVGEMGNKLNKLPLGSNGSDAKKIKDVLEAIGQVVVQLGNAQEALEGKKTEAINA 689

Query: 62  TKEWSSLSPEEKNKIRSRLLELLEEKKAQLT 92
            K     +  E  K R+ L   +++ K+ LT
Sbjct: 690 VKTALGTAKTELEKARTELDTAVKQVKSGLT 720



>EAY08284.1 on XP_001610196  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1330

 Score = 22.7 bits (47), Expect = 6.6,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 19/33 (57%)

Query: 7   QDRQELIEEIFDALEELILGRRNGSTDEIEDLL 39
            DR++ + E+ + L +L LG       +I+D+L
Sbjct: 662 HDRKKRVGEMGNKLNKLPLGSNGSDAKKIKDVL 694



>EAY08284.1 on XP_001609533  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1162

 Score = 22.3 bits (46), Expect = 8.3,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 19/33 (57%)

Query: 7   QDRQELIEEIFDALEELILGRRNGSTDEIEDLL 39
            DR+  ++E+ + L +L LG       +I+D+L
Sbjct: 608 HDRKWRVKEMGNKLNKLPLGSNGSDAKKIKDVL 640




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08286.1 hypothetical protein TVAG_401400 [Trichomonas
vaginalis G3]
         (91 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_813740   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   4.2  

>EAY08286.1 on XP_813740   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 717

 Score = 22.7 bits (47), Expect = 4.2,   Method: Composition-based stats.
 Identities = 9/23 (39%), Positives = 15/23 (65%)

Query: 11  PSASNKQSWRISYNPDENKFKIF 33
           P+   ++S RI+Y+ DE K  +F
Sbjct: 279 PNEKGERSNRITYSTDEGKTWVF 301




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08304.1 Clan SC, family S33, methylesterase-like
serine peptidase [Trichomonas vaginalis G3]
         (282 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08306.1 hypothetical protein TVAG_401600 [Trichomonas
vaginalis G3]
         (85 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001612314  variant erythrocyte surface antigen-1, alpha subun...    25   0.68 
XP_001608796  variant erythrocyte surface antigen-1, alpha subun...    24   1.8  
XP_803400  VSG  (Establishment)  [Trypanosoma brucei]                  23   4.2  
AAY44835  MSA-1  (Invasion)  [Babesia bovis]                           22   4.6  
AAY44838  MSA-1  (Invasion)  [Babesia bovis]                           22   5.5  
XP_001609533  variant erythrocyte surface antigen-1, alpha subun...    22   6.1  
XP_001349514  PfEMP1  (Establishment)  [Plasmodium falciparum]         22   6.4  
XP_001351563  PfEMP1  (Establishment)  [Plasmodium falciparum]         22   9.0  

>EAY08306.1 on XP_001612314  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1308

 Score = 25.0 bits (53), Expect = 0.68,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 28  CKKKQQCGGVENDEERKEIIEKLETYRS 55
           CK+  +C  +EN +    I E  ++YRS
Sbjct: 235 CKENAKCSCIENGKNSLRIREHKDSYRS 262



>EAY08306.1 on XP_001608796  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1261

 Score = 23.9 bits (50), Expect = 1.8,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 2/65 (3%)

Query: 19   NRIKSKICYCKKKQQCGGVENDEERKEIIEKLETYRSILKLSEAKIKEFNRINKLIGRDE 78
            N +K +    +K QQCG + +  E KE  +K         L +  +KE   I K++G D+
Sbjct: 955  NPVKGENQKGQKNQQCGHIGSSSE-KEHEDKYFCGWCASGLRDV-VKEIEWIQKVVGGDD 1012

Query: 79   FLNSI 83
            +  S+
Sbjct: 1013 YRTSV 1017




 Score = 21.9 bits (45), Expect = 7.2,   Method: Composition-based stats.
 Identities = 10/32 (31%), Positives = 14/32 (43%)

Query: 26  CYCKKKQQCGGVENDEERKEIIEKLETYRSIL 57
           C C K++   G  N+E R         Y+ IL
Sbjct: 193 CSCDKEKSSNGTYNEEYRIHSYTSAYPYKPIL 224



>EAY08306.1 on XP_803400  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 483

 Score = 22.7 bits (47), Expect = 4.2,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 11/62 (17%)

Query: 2   SDNEAAKSPD---------DEYKKKLNRIKSKICY--CKKKQQCGGVENDEERKEIIEKL 50
           S  +A K PD         +E KK  +  K       CKK++ C  VE   E ++   K+
Sbjct: 403 SAPQAEKQPDTTEVKPGKAEETKKTADECKKHTTSEDCKKEKGCDFVEKKPEGEKCFPKV 462

Query: 51  ET 52
           ET
Sbjct: 463 ET 464



>EAY08306.1 on AAY44835  MSA-1  (Invasion)  [Babesia bovis]
          Length = 270

 Score = 22.3 bits (46), Expect = 4.6,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 2/55 (3%)

Query: 1   MSDNEAAKSPDDEYKKKLNRIKSKICYCKKKQQCGG--VENDEERKEIIEKLETY 53
           ++  E AK  D ++   +  +      CK   +         EERKE IE+++TY
Sbjct: 108 VTSAEEAKKVDGDFDTLMGSVIQIYHKCKALDEVAKRLFSGGEERKENIEEMKTY 162



>EAY08306.1 on AAY44838  MSA-1  (Invasion)  [Babesia bovis]
          Length = 266

 Score = 22.3 bits (46), Expect = 5.5,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 2/55 (3%)

Query: 1   MSDNEAAKSPDDEYKKKLNRIKSKICYCKKKQQCGG--VENDEERKEIIEKLETY 53
           ++  E AK  D ++   +  +      CK   +         EERKE IE+++TY
Sbjct: 108 VTSAEEAKKVDGDFDTLMGSVIQIYHKCKALDEVAKRLFSGGEERKENIEEMKTY 162



>EAY08306.1 on XP_001609533  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1162

 Score = 22.3 bits (46), Expect = 6.1,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 5/43 (11%)

Query: 38  ENDEERKEIIEKLETYRSILKLSEAKIKEFNR-----INKLIG 75
           E D  + +I E +   R +LK  E  IKE  +      N+L+G
Sbjct: 726 EYDPGKNKISESINKVREVLKELEKVIKELKKKEVDDANELLG 768



>EAY08306.1 on XP_001349514  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2120

 Score = 22.3 bits (46), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 5/53 (9%)

Query: 6    AAKSP---DDEYKKKLNRIKSKICYCKKKQQCGGVENDE--ERKEIIEKLETY 53
            +A SP   DD     +NR++ KI  CK+K      EN    +   ++E ++ Y
Sbjct: 1508 SAHSPNGKDDAIDCMINRLQDKIDKCKEKHPQPSAENQTTCDESTLVEDVDDY 1560



>EAY08306.1 on XP_001351563  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2149

 Score = 21.9 bits (45), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 12/25 (48%), Positives = 13/25 (52%)

Query: 12  DEYKKKLNRIKSKICYCKKKQQCGG 36
           D  K +LN I S   YCK    CGG
Sbjct: 469 DFTKFELNEIFSLTEYCKPCPYCGG 493




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08309.1 TKL family protein kinase [Trichomonas
vaginalis G3]
         (1153 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    44   2e-05
XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 29   2.0  
XP_001350936  PfEMP1  (Establishment)  [Plasmodium falciparum]         29   2.0  
XP_001350082  Rh2b  (Adhesin)  [Plasmodium falciparum]                 29   2.3  
AAM20900  cGMP-dependent protein kinase  (Others)  [Eimeria tene...    28   2.9  

>EAY08309.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/216 (22%), Positives = 98/216 (45%), Gaps = 21/216 (9%)

Query: 204 RLELPDSFYLQKRDFVLKKKIGSGGFADVYEGIQQSTQKVVAIKILHNNEISESLFKSFK 263
           +  +PDS+        + +KIG G F++V+EG+   T+     K +          K  +
Sbjct: 48  KWNVPDSY-------EIVRKIGRGKFSEVFEGLNTVTKD----KCVIKILKPVKKKKIKR 96

Query: 264 REIEIQSKLKNFAILELVGVCLE----APFYIATEFMPKDCLFKRIHSQTKLEPTKKTII 319
               +Q+      I++L+ +  +     P  I       D  FK ++    ++  K  I 
Sbjct: 97  EIKILQNLRGGPNIIKLLDIVKDPQSRTPSLIFEHVNNTD--FKTLYPTLTIQDIKYYIY 154

Query: 320 ALGCAIALSYMHKLDYIHRDIKSLNILLDADDYP-KICDFGMSRKLLHQELMTGGIGTAQ 378
            L    A++Y H    +HRDIK  N+++D +    ++ D+G++     ++  +  + T  
Sbjct: 155 QL--LKAMNYCHSQGIMHRDIKPHNVMIDHEKKILRLIDWGLAEFYHPEQEYSVRVATRY 212

Query: 379 WEAPEVISNQMYTE-KCDVYSYGILLWEILTGEVPF 413
           ++ PE++ +  Y +   D++S G +L  I+  + PF
Sbjct: 213 YKGPELLVDMRYYDYSLDIWSIGCMLAGIIFKKEPF 248



>EAY08309.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 28.9 bits (63), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 1/38 (2%)

Query: 620  YAVFHKMQIAKVDIS-STYNAIFSSFQKIGDTSMFDVL 656
            Y + H  ++ +++ S  TYN+I ++F KI +T   D+L
Sbjct: 2317 YKIVHFNKLKEIENSLETYNSISTNFNKINETQNIDIL 2354



>EAY08309.1 on XP_001350936  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2163

 Score = 28.9 bits (63), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 19/77 (24%), Positives = 38/77 (49%), Gaps = 8/77 (10%)

Query: 142 ADLQDMIRKISGILQDPSVPSQLTVLLQCRLGEYQNALKELNTELASCNTISKSLNGEML 201
           AD+ D++R     L +P   +Q  +L        +N LK++  ++ S    +   NG  L
Sbjct: 199 ADIGDIVRGKDLYLGNPQESTQRIIL--------ENNLKDIFAKIHSDVMSTSGSNGRAL 250

Query: 202 RQRLELPDSFYLQKRDF 218
           ++R +  D++Y  + D+
Sbjct: 251 QKRYKDTDNYYELREDW 267



>EAY08309.1 on XP_001350082  Rh2b  (Adhesin)  [Plasmodium falciparum]
          Length = 1115

 Score = 28.9 bits (63), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 1/38 (2%)

Query: 620 YAVFHKMQIAKVDIS-STYNAIFSSFQKIGDTSMFDVL 656
           Y + H  ++ +++ S  TYN+I ++F KI +T   D+L
Sbjct: 178 YKIVHFNKLKEIENSLETYNSISTNFNKINETQNIDIL 215



>EAY08309.1 on AAM20900  cGMP-dependent protein kinase  (Others)  [Eimeria
          tenella]
          Length = 255

 Score = 28.1 bits (61), Expect = 2.9,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 17/27 (62%)

Query: 42 QQLSNFQKSMGQIEIPSDSPSPQQIQR 68
          QQ +  QKS G    P+D+P+P + +R
Sbjct: 20 QQAAQEQKSTGPSGAPNDAPAPAEAER 46




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08313.1 hypothetical protein TVAG_401670 [Trichomonas
vaginalis G3]
         (156 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_829333  VSG  (Establishment)  [Trypanosoma brucei]                  27   0.47 
XP_001351514  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   0.60 
XP_001351515  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   0.64 
XP_819341   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   0.72 
XP_815845   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   1.8  
XP_001609101  variant erythrocyte surface antigen-1, alpha subun...    25   1.8  
XP_001609163  variant erythrocyte surface antigen-1, alpha subun...    25   1.8  
XP_810953   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   2.0  
XP_818312   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   2.5  
XP_813677   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   5.6  

>EAY08313.1 on XP_829333  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 420

 Score = 26.9 bits (58), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 10/69 (14%)

Query: 7   TKMEK-----VKRLMEEMKAARS---ELESLQEQEYDVQKSNQLREELMHLKQVYRE--N 56
           TK+EK     VK+++ E   A S   ELE LQ+Q    ++ N    E + + ++ R   +
Sbjct: 49  TKVEKNVKRTVKKILTESGVADSRKKELEDLQKQAEKYREENMSFWETVGMGEINRSLTD 108

Query: 57  EIYIQNHSA 65
            +Y +NH+A
Sbjct: 109 ALYGENHNA 117



>EAY08313.1 on XP_001351514  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2201

 Score = 26.9 bits (58), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 7/96 (7%)

Query: 60   IQNHSASPNFVPEHKEDCVRRHVPRYEKLFKDQNPEWKTVGQVYYPTCPEEEICHPTPYV 119
            I+NHS++ NF+ E K     +     +     +N         Y  TCP  +       V
Sbjct: 1303 IKNHSSAANFLKELKHGKDNQGNSDQDNKLDFENIPQTFSRSTYCKTCPPNK-------V 1355

Query: 120  NCSCYPQLKTIATVNWKNRPVVDDRVYERPWNKIYK 155
            NCS   + +T    N       +   +E+ ++KI K
Sbjct: 1356 NCSSGSKSRTSGGTNRCTEVKKNGETWEKVFDKIAK 1391



>EAY08313.1 on XP_001351515  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2181

 Score = 26.9 bits (58), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 7/96 (7%)

Query: 60   IQNHSASPNFVPEHKEDCVRRHVPRYEKLFKDQNPEWKTVGQVYYPTCPEEEICHPTPYV 119
            I+NHS++ NF+ E K     +     +     +N         Y  TCP  +       V
Sbjct: 1283 IKNHSSAANFLKELKHGKDNQGNSDQDNKLDFENIPQTFSRSTYCKTCPPNK-------V 1335

Query: 120  NCSCYPQLKTIATVNWKNRPVVDDRVYERPWNKIYK 155
            NCS   + +T    N       +   +E+ ++KI K
Sbjct: 1336 NCSSGSKSRTSGGTNRCTEVKKNGETWEKVFDKIAK 1371



>EAY08313.1 on XP_819341   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 888

 Score = 26.6 bits (57), Expect = 0.72,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 16/36 (44%)

Query: 87  KLFKDQNPEWKTVGQVYYPTCPEEEICHPTPYVNCS 122
           K  KD    WK V +     CP   + +P+P   CS
Sbjct: 481 KRVKDVLATWKKVDETVSKLCPSSAVENPSPGNACS 516



>EAY08313.1 on XP_815845   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 936

 Score = 25.4 bits (54), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 90  KDQNPEWKTVGQVYYPTCPEEEICHPTPYVNCSCYPQLKTIA 131
           KD    WKTV  +    CP E      P  N +C P  K  A
Sbjct: 471 KDVLATWKTVDDLVSELCPSENAKKDAPTEN-ACSPTDKITA 511



>EAY08313.1 on XP_001609101  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1359

 Score = 25.4 bits (54), Expect = 1.8,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 17/23 (73%)

Query: 5   AETKMEKVKRLMEEMKAARSELE 27
           A+ K+E+ K+  E ++AA+ ELE
Sbjct: 750 AKEKLEEAKKTQEALEAAKGELE 772



>EAY08313.1 on XP_001609163  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1360

 Score = 25.4 bits (54), Expect = 1.8,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 17/23 (73%)

Query: 5   AETKMEKVKRLMEEMKAARSELE 27
           A+ K+E+ K+  E ++AA+ ELE
Sbjct: 750 AKEKLEEAKKTQEALEAAKGELE 772



>EAY08313.1 on XP_810953   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 958

 Score = 25.4 bits (54), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 6/49 (12%)

Query: 82  VPRYEKL--FKDQNPEWKTVGQVYYPTCPEEEICHPTPYVNCSCYPQLK 128
           VP  E+L   KD    WK V  +    CP EE   P    + +C P +K
Sbjct: 477 VPLTEQLQRVKDVLATWKKVDDLVSELCPSEEDGSP----DDACSPTVK 521



>EAY08313.1 on XP_818312   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 928

 Score = 25.0 bits (53), Expect = 2.5,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 90  KDQNPEWKTVGQVYYPTCPEEEICHPTPYVNCSCYPQLKTIA 131
           KD    WK V +     CP E     TP  + +C P +K  A
Sbjct: 465 KDVLATWKEVDEHVSKLCPSEGAVQVTP-PDTACSPTVKITA 505



>EAY08313.1 on XP_813677   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 945

 Score = 23.9 bits (50), Expect = 5.6,   Method: Composition-based stats.
 Identities = 13/34 (38%), Positives = 13/34 (38%), Gaps = 1/34 (2%)

Query: 90  KDQNPEWKTVGQVYYPTCPEEEICHPTP-YVNCS 122
           KD    WK V       CP E     TP Y  CS
Sbjct: 481 KDVLATWKEVDDRVSELCPSERAAKDTPTYTACS 514




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08319.1 hypothetical protein TVAG_401740 [Trichomonas
vaginalis G3]
         (733 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_808179   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   9.7  

>EAY08319.1 on XP_808179   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 942

 Score = 25.8 bits (55), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 3/32 (9%)

Query: 140 KGAREQQAILE---MEKKRQLLDYSTPEAVVD 168
           +GARE+   LE    EKK++ +D S P AVV+
Sbjct: 140 EGAREKTQFLEEGTSEKKKKRVDVSRPTAVVN 171




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08321.1 hypothetical protein TVAG_401760 [Trichomonas
vaginalis G3]
         (72 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_951757  VSG  (Establishment)  [Trypanosoma brucei]                  24   1.1  
XP_814919   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   6.5  
XP_815173   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   7.7  
XP_817493   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   7.9  
XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 22   8.1  

>EAY08321.1 on XP_951757  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 476

 Score = 23.9 bits (50), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 20/36 (55%)

Query: 27  KPTASSKDFLLESDLVDFLVNELDPENDEQETVVQT 62
           KP+A++K+++  SD +     +LD E  +  T   T
Sbjct: 239 KPSATTKEWVFHSDKIAHQAAQLDTELSDALTTYAT 274



>EAY08321.1 on XP_814919   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 854

 Score = 21.6 bits (44), Expect = 6.5,   Method: Composition-based stats.
 Identities = 12/28 (42%), Positives = 14/28 (50%)

Query: 2   LDPSFEESKIPLRILLIVSENVNLGKPT 29
           LD SF ES IP   L+    N + G  T
Sbjct: 545 LDASFSESSIPTAGLVGFLSNTSSGGDT 572



>EAY08321.1 on XP_815173   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 661

 Score = 21.6 bits (44), Expect = 7.7,   Method: Composition-based stats.
 Identities = 12/28 (42%), Positives = 14/28 (50%)

Query: 2   LDPSFEESKIPLRILLIVSENVNLGKPT 29
           LD SF ES IP   L+    N + G  T
Sbjct: 480 LDASFSESSIPTAGLVGFLSNTSSGGDT 507



>EAY08321.1 on XP_817493   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 765

 Score = 21.6 bits (44), Expect = 7.9,   Method: Composition-based stats.
 Identities = 12/28 (42%), Positives = 14/28 (50%)

Query: 2   LDPSFEESKIPLRILLIVSENVNLGKPT 29
           LD SF ES IP   L+    N + G  T
Sbjct: 479 LDASFSESSIPTAGLVGFLSNTSSGGDT 506



>EAY08321.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 21.6 bits (44), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 10/19 (52%), Positives = 13/19 (68%)

Query: 37   LESDLVDFLVNELDPENDE 55
            LESD+V  + +EL  E DE
Sbjct: 2879 LESDMVKIIKDELTKEKDE 2897




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08326.1 hypothetical protein TVAG_352480 [Trichomonas
vaginalis G3]
         (149 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAA83031  Hemolysin  (Invasion)  [Cryptosporidium parvum]              25   1.7  
XP_001349738  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   4.1  
XP_001351564  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   4.2  

>EAY08326.1 on AAA83031  Hemolysin  (Invasion)  [Cryptosporidium parvum]
          Length = 229

 Score = 25.0 bits (53), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 7/46 (15%)

Query: 80  REAGIRKSNSFVPTESMTRTLKELKETQK-------KNDPAFRSMN 118
            E G   SNSF PT S +  L + +           KN P+F  MN
Sbjct: 102 HEIGWNASNSFTPTNSGSLELFQFERRDSPVAVDTLKNYPSFERMN 147



>EAY08326.1 on XP_001349738  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2162

 Score = 24.3 bits (51), Expect = 4.1,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 5/33 (15%)

Query: 5   RSEKLYLGSLKRKTNAEIDIQKKQEQMRWEQSL 37
           R + LYLG +K+K N      KK E+ + E++L
Sbjct: 188 RGKDLYLGDIKKKQNG-----KKTEREKLEENL 215



>EAY08326.1 on XP_001351564  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2207

 Score = 24.3 bits (51), Expect = 4.2,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 5/33 (15%)

Query: 5   RSEKLYLGSLKRKTNAEIDIQKKQEQMRWEQSL 37
           R + LYLG +K+K N      KK E+ + E++L
Sbjct: 188 RGKDLYLGDIKKKQNG-----KKTEREKLEENL 215




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08327.1 hypothetical protein TVAG_352490 [Trichomonas
vaginalis G3]
         (214 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609666  variant erythrocyte surface antigen-1, alpha subun...    36   0.001
XP_001608668  variant erythrocyte surface antigen-1, alpha subun...    32   0.020
XP_001348165  RESA  (Others)  [plasmodium falciparum]                  28   0.29 
XP_001609667  variant erythrocyte surface antigen-1, alpha subun...    28   0.37 
XP_001610196  variant erythrocyte surface antigen-1, alpha subun...    28   0.40 
XP_001609101  variant erythrocyte surface antigen-1, alpha subun...    27   0.84 
XP_001610567  variant erythrocyte surface antigen-1, alpha subun...    27   1.1  
XP_001609033  variant erythrocyte surface antigen-1, alpha subun...    27   1.4  
XP_001350082  Rh2b  (Adhesin)  [Plasmodium falciparum]                 26   2.0  
XP_001610714  variant erythrocyte surface antigen-1, alpha subun...    26   2.0  
XP_001609315  variant erythrocyte surface antigen-1, alpha subun...    26   2.1  
XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 26   2.4  
XP_001611206  variant erythrocyte surface antigen-1, alpha subun...    25   3.5  
XP_001610568  variant erythrocyte surface antigen-1, alpha subun...    25   5.2  
XP_821677   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   5.5  

>EAY08327.1 on XP_001609666  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1269

 Score = 36.2 bits (82), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 6/72 (8%)

Query: 115 QKLDEVTEKIAAIFERLDENKKNQNETQEKIRINSI--VLNKLKEDFEEIKLKRQILGDK 172
           +KL +V EKI  +  +L  N +   ET++K  I  +   L K KE  E  K     L DK
Sbjct: 608 EKLKDVLEKIGEVVVQLG-NAQEALETKDKDVIEKVKEALRKAKEGLETAK---NGLKDK 663

Query: 173 LEEARKKVEKAT 184
           LEEA+KK+++ T
Sbjct: 664 LEEAKKKLDELT 675



>EAY08327.1 on XP_001608668  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1337

 Score = 32.3 bits (72), Expect = 0.020,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 71/150 (47%), Gaps = 12/150 (8%)

Query: 68  LCKNCLEKLESKRCPFCNAKIEATAINFSLKKISENIEDENVIPDFKQKLDEVTEKIAAI 127
           +C  C      ++C     K +   +   +K   E  +DE       ++L +V + I ++
Sbjct: 641 MCLGCNPMEHDRKCRVDKVKEDLVGLVNKVKVGLEGNKDEEAD---GEELFDVLKAIGSV 697

Query: 128 FERLDENKKNQNETQEKIRINSIVLNKLKEDFEEIKLKRQIL-------GDKLEEARKKV 180
             +L  N +   E + + ++   V  KL E  +E++  ++ +       G +LEEA+K V
Sbjct: 698 VVQLG-NAQEALEGKAESKVIEGVKQKLGEAKKELEKAKEAVESEVGMDGKELEEAKKAV 756

Query: 181 EKATQEEEDLTIIVEEKKKAAEIENLENII 210
           EKA  E +++ +   EKK  A +EN ++ +
Sbjct: 757 EKAKTEGDNVRMAKLEKKMKA-LENAKDAL 785



>EAY08327.1 on XP_001348165  RESA  (Others)  [plasmodium falciparum]
          Length = 1085

 Score = 28.5 bits (62), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 4/86 (4%)

Query: 52  TDDDHKPMSLAPCGHTLCKNCLEKLESKRCPFCNAKIEATAINFSLKKISENIEDENVIP 111
            D+ ++  +++   +T  K  LEK+ S         IE TA+N + + +S+N  DE  + 
Sbjct: 769 VDNGNQSKNISDLSYTDQKEILEKIVSYIVDISLYDIENTALNAAEQLLSDNSVDEKTLK 828

Query: 112 DFKQKLDEVTEKIAAIFERLDENKKN 137
              Q L    +K+++I ER    K+N
Sbjct: 829 KRAQSL----KKLSSIMERYAGGKRN 850



>EAY08327.1 on XP_001609667  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1303

 Score = 28.5 bits (62), Expect = 0.37,   Method: Composition-based stats.
 Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 15/90 (16%)

Query: 116 KLDEVTEKIAAIFERLDENKKNQNETQEKIRINSIVLNKLKEDFEEIKLKRQILGDKLEE 175
           KL +V EKI  +  +L     N  E  E+         +  E+ + ++ K Q     LEE
Sbjct: 660 KLKDVLEKIGEVVVQLG----NAQEALER---------RKGEEIKGVQKKLQEAKKGLEE 706

Query: 176 ARKKVEKATQEEEDLTIIVEEKKKAAEIEN 205
           ARK++E  T E+ D   + E K+   E+ N
Sbjct: 707 ARKELE--TGEDLDEDDLKEAKEALGELTN 734



>EAY08327.1 on XP_001610196  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1330

 Score = 28.1 bits (61), Expect = 0.40,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 40/73 (54%), Gaps = 2/73 (2%)

Query: 115 QKLDEVTEKIAAIFERLDENKKN-QNETQEKIRINSIVLNKLKEDFEEIKLKRQILGDKL 173
           +K+ +V E I  +  +L   ++  + + +E I    + L   K + ++  +K  + G +L
Sbjct: 688 KKIKDVLEAIGQVVVQLGNAQEALEGKEKEAIEGVKVALGTAKTELDK-AVKNGLNGKEL 746

Query: 174 EEARKKVEKATQE 186
           EEA+KK+E+ T +
Sbjct: 747 EEAKKKLEELTTK 759



>EAY08327.1 on XP_001609101  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1359

 Score = 27.3 bits (59), Expect = 0.84,   Method: Composition-based stats.
 Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 25/109 (22%)

Query: 112 DFKQKLDEVTEKIAAIFERLDENKKNQNETQEKIRINSIVLNKLKEDFEEIKLKRQILGD 171
           D K  L++V + +  + E+L E  K      EK++             EEIK   +   +
Sbjct: 710 DLKGVLEKVLDVVLGVVEKLVEGVK------EKVKA-----------LEEIKKTLEAAKE 752

Query: 172 KLEEARKK---VEKATQEEEDLTIIVEEKKKA-----AEIENLENIIKS 212
           KLEEA+K    +E A  E E     +   KKA     ++I+  +NI+ +
Sbjct: 753 KLEEAKKTQEALEAAKGELEGAKGALTTAKKAFPGSSSDIDPCKNIVSA 801



>EAY08327.1 on XP_001610567  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1315

 Score = 26.9 bits (58), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 38/76 (50%)

Query: 114 KQKLDEVTEKIAAIFERLDENKKNQNETQEKIRINSIVLNKLKEDFEEIKLKRQILGDKL 173
           K+ ++ V  K+    E LD+ +    E  +K+  + +  N+L +   ++    +  G KL
Sbjct: 701 KEAIEGVKAKLQEAKEGLDKARTALEEAAKKVNGDGLSGNELTKAKTKLDALAKNGGGKL 760

Query: 174 EEARKKVEKATQEEED 189
            E  +K+ KAT ++ D
Sbjct: 761 GEVVQKLGKATSDDFD 776



>EAY08327.1 on XP_001609033  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1270

 Score = 26.6 bits (57), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 2/80 (2%)

Query: 112 DFKQKLDEVTEKIAAIFERLDENKKNQNETQEKIRINSIVLNKLKEDFEEIKLKRQILGD 171
           D K ++++V + +  + E  D          E I    + L   +E  E+    + I G 
Sbjct: 604 DRKGRVEKVKDGLDGVKEGADSVAAKVKALLEAIGEVVVQLGNAQEALEKKAENKAIEGV 663

Query: 172 K--LEEARKKVEKATQEEED 189
           K  LE+A+K++E A  EE+D
Sbjct: 664 KGALEKAKKELEGAKGEEDD 683



>EAY08327.1 on XP_001350082  Rh2b  (Adhesin)  [Plasmodium falciparum]
          Length = 1115

 Score = 26.2 bits (56), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 12/31 (38%), Positives = 19/31 (61%)

Query: 109 VIPDFKQKLDEVTEKIAAIFERLDENKKNQN 139
           +I D K+K+ E+T+ I   F  + EN  N+N
Sbjct: 453 IIDDAKRKVKEITDNINKAFNEITENYNNEN 483



>EAY08327.1 on XP_001610714  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1231

 Score = 26.2 bits (56), Expect = 2.0,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 6/73 (8%)

Query: 112 DFKQKLDEVTEKIAAIFERLDENKKNQNETQEKIRINSIVLNKLKEDFEEIKLKRQILGD 171
           D    L E+ ++I  +  +L  N +   E +EK  I  +     K + E+ K        
Sbjct: 595 DLPGALKELLQRIGEVVVQLG-NAQEALEGKEKKAIQGV-----KRELEKAKGALDTAKG 648

Query: 172 KLEEARKKVEKAT 184
           KLE+A+K +EK T
Sbjct: 649 KLEKAKKALEKLT 661



>EAY08327.1 on XP_001609315  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1338

 Score = 25.8 bits (55), Expect = 2.1,   Method: Composition-based stats.
 Identities = 47/205 (22%), Positives = 83/205 (40%), Gaps = 40/205 (19%)

Query: 34  QTAEISSVLVCKKCHQDMTDDDHKPMS--LAPCGHTLCK--NCLEKLESKRCPFCNAK-I 88
           +  EIS  LV K        DD K +   L   G  + +  N  E LE K      +K I
Sbjct: 665 KVGEISDALVKKVEASGGDGDDGKELKDLLEKIGEVVVQLGNAQEALEGK----AESKVI 720

Query: 89  EATAINFSLKKIS-ENIEDENVIPDFKQKLDEVTE-----------KIAAIFERLDENKK 136
           E   +  +  K   E + DEN   + K+K+ E+T            ++    E     +K
Sbjct: 721 EGVKVALTKAKTELEGVVDENANNELKEKIKELTNGSGGGKGNLLGEVEGALENAKNIEK 780

Query: 137 NQNETQEKIRINSI---------VLNKLKEDFEEIKLKRQILGDKLEEARKKVEKATQEE 187
            ++ +  K +I++          +L KL + +EE          +L++  K  E    + 
Sbjct: 781 ERDYSNAKDKISAAIHKVLEVLKILTKLAKQYEE----------ELKDKMKGNEPTNNKI 830

Query: 188 EDLTIIVEEKKKAAEIENLENIIKS 212
           E ++ I E K+    I+++ +I+ S
Sbjct: 831 ELISFIKELKEFLNIIDDMFDIVGS 855



>EAY08327.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 25.8 bits (55), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 12/31 (38%), Positives = 19/31 (61%)

Query: 109  VIPDFKQKLDEVTEKIAAIFERLDENKKNQN 139
            +I D K+K+ E+T+ I   F  + EN  N+N
Sbjct: 2592 IIDDAKRKVKEITDNINKAFNEITENYNNEN 2622



>EAY08327.1 on XP_001611206  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1285

 Score = 25.4 bits (54), Expect = 3.5,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 10/102 (9%)

Query: 44   CKKCHQDMTDDDHKPMSLAPCGHTL-CKNCLEKLESKRCPFCNAKIEATAINFSLKKISE 102
            C+K     T  D K   L  C   + C   L  L      + N         F+L+   +
Sbjct: 1108 CRKGEHGRTTGDTKGTPLCNCSSIVSCTGVLPVLYRHGFSYGNP--------FNLEGYQQ 1159

Query: 103  NIEDE-NVIPDFKQKLDEVTEKIAAIFERLDENKKNQNETQE 143
            N  D+ +   D KQ   +  E ++++   +D+NK++Q  +QE
Sbjct: 1160 NDTDKGDYSIDNKQNPRQCHEFLSSLGAVIDKNKQDQATSQE 1201



>EAY08327.1 on XP_001610568  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1329

 Score = 24.6 bits (52), Expect = 5.2,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 1/77 (1%)

Query: 110 IPDFKQKLDEVTEKIAAIFERLDENKKNQNE-TQEKIRINSIVLNKLKEDFEEIKLKRQI 168
           + D  +K+ EV  ++    E L+  K    E  ++K+      L K K + E     +  
Sbjct: 672 LKDVLEKIGEVVVQLGNAQEALEGKKTEAIEGVKKKLEGAKTELGKAKGELETAVNGKDG 731

Query: 169 LGDKLEEARKKVEKATQ 185
           L  KL EA+KK+   T+
Sbjct: 732 LNGKLAEAKKKLVALTK 748



>EAY08327.1 on XP_821677   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 861

 Score = 24.6 bits (52), Expect = 5.5,   Method: Composition-based stats.
 Identities = 12/29 (41%), Positives = 18/29 (62%)

Query: 153 NKLKEDFEEIKLKRQILGDKLEEARKKVE 181
           NK KE  E+ K K Q+L + +   +KKV+
Sbjct: 135 NKPKEVLEDAKEKPQVLEEDISTEKKKVD 163




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08333.1 hypothetical protein TVAG_352550 [Trichomonas
vaginalis G3]
         (229 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08335.1 CAMK family protein kinase [Trichomonas
vaginalis G3]
         (325 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    71   9e-15

>EAY08335.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 70.9 bits (172), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 118/253 (46%), Gaps = 21/253 (8%)

Query: 51  NYNIIKQIGQGTYAKVFLLESQDTKQKFAGKIYQKSKITKREFGRPNKFKILLDEIELMS 110
           +Y I+++IG+G +++VF  E  +T          K K   +      K KI  +   L +
Sbjct: 54  SYEIVRKIGRGKFSEVF--EGLNT--------VTKDKCVIKILKPVKKKKIKREIKILQN 103

Query: 111 KLDHPNIIKNLEFIEDDEKDAICVITQYASKGSLAPSSLTVPSIDEKTAKNVFKQIGEAL 170
               PNIIK L+ ++D +     +I ++ +           P++  +  K    Q+ +A+
Sbjct: 104 LRGGPNIIKLLDIVKDPQSRTPSLIFEHVNNTDF---KTLYPTLTIQDIKYYIYQLLKAM 160

Query: 171 DYLHSKNIIHRDIKPDNILLFDDGKAM-LSDFSVSKQLSSPDELLDDSEGTPLFCSPEEQ 229
           +Y HS+ I+HRDIKP N+++  + K + L D+ ++ +   P++       T  +  PE  
Sbjct: 161 NYCHSQGIMHRDIKPHNVMIDHEKKILRLIDWGLA-EFYHPEQEYSVRVATRYYKGPELL 219

Query: 230 TGDPYDGKIADVWSYGLSLYIMIYGKNPFMTKATEGTYFEQCVKISKLISEKEIEY---D 286
               Y     D+WS G  L  +I+ K PF         ++Q VKI+K++  +++      
Sbjct: 220 VDMRYYDYSLDIWSIGCMLAGIIFKKEPFFYGHDN---YDQLVKIAKVLGTEDLHRYFEK 276

Query: 287 PGTPISPELQEVF 299
            G   +P  QE+ 
Sbjct: 277 YGLKFAPAYQEIL 289




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08356.1 hypothetical protein TVAG_352780 [Trichomonas
vaginalis G3]
         (83 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 31   0.005
XP_812751   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   3.2  
XP_954179  TashAT2  (Establishment)  [Theileria annulata]              23   3.9  
XP_822014   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   4.4  
XP_821405   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   4.9  
CAA70921  MIC5  (Others)  [Toxoplasma gondii]                          22   4.9  
XP_001350082  Rh2b  (Adhesin)  [Plasmodium falciparum]                 22   5.2  
XP_822006   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   5.9  
XP_829795  VSG  (Establishment)  [Trypanosoma brucei]                  22   6.4  
XP_001609041  variant erythrocyte surface antigen-1, alpha subun...    22   8.1  

>EAY08356.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 30.8 bits (68), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 6/80 (7%)

Query: 8    EALKKEIREQILSELKEQKQEQKPERPKRKLSEKQLAALAAGRQKNPRWQA----KRARE 63
            E LK++ +E++  E ++Q+Q QK E  KR+  E+     A  RQ+  R Q     KR  +
Sbjct: 2751 EELKRQEQERL--EREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQ 2808

Query: 64   EAEAKAKEEQKAKEAEAKKE 83
            E   + K+EQ  KE E K++
Sbjct: 2809 ERLEREKQEQLQKEEELKRQ 2828




 Score = 27.7 bits (60), Expect = 0.065,   Method: Composition-based stats.
 Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 6/76 (7%)

Query: 8    EALKKEIREQILSELKEQKQEQKPERPKRKLSEKQLAALAAGRQKNPRWQAKRAREEAEA 67
            EALK++ +E++  E + ++QEQ  ER +R+  E+        RQ+  R Q    +EEA  
Sbjct: 2787 EALKRQEQERLQKEEELKRQEQ--ERLEREKQEQLQKEEELKRQEQERLQ----KEEALK 2840

Query: 68   KAKEEQKAKEAEAKKE 83
            + ++E+  KE E K++
Sbjct: 2841 RQEQERLQKEEELKRQ 2856




 Score = 26.9 bits (58), Expect = 0.13,   Method: Composition-based stats.
 Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 2/75 (2%)

Query: 8    EALKKEIREQILSELKEQKQEQKPERPKRKLSEKQLAALAAGRQKNPRWQAKRAREEAEA 67
            E LK++ +E++  E ++Q+Q QK E  KR+  E+     A  RQ+  R Q +   +  E 
Sbjct: 2801 EELKRQEQERL--EREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQ 2858

Query: 68   KAKEEQKAKEAEAKK 82
            +  E +K + AE ++
Sbjct: 2859 ERLERKKIELAEREQ 2873




 Score = 26.6 bits (57), Expect = 0.20,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 39/74 (52%)

Query: 8    EALKKEIREQILSELKEQKQEQKPERPKRKLSEKQLAALAAGRQKNPRWQAKRAREEAEA 67
            E L++E +EQ+  E + ++QEQ+  + +  L  ++   L    +   + Q +  RE+ E 
Sbjct: 2759 ERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQERLEREKQEQ 2818

Query: 68   KAKEEQKAKEAEAK 81
              KEE+  ++ + +
Sbjct: 2819 LQKEEELKRQEQER 2832




 Score = 25.4 bits (54), Expect = 0.43,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 40/74 (54%)

Query: 8    EALKKEIREQILSELKEQKQEQKPERPKRKLSEKQLAALAAGRQKNPRWQAKRAREEAEA 67
            E LK++ +E++  E   ++QEQ+  + + +L  ++   L   +Q+  + + +  R+E E 
Sbjct: 2773 EELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQERLEREKQEQLQKEEELKRQEQER 2832

Query: 68   KAKEEQKAKEAEAK 81
              KEE   ++ + +
Sbjct: 2833 LQKEEALKRQEQER 2846




 Score = 22.7 bits (47), Expect = 4.3,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 37/73 (50%)

Query: 8    EALKKEIREQILSELKEQKQEQKPERPKRKLSEKQLAALAAGRQKNPRWQAKRAREEAEA 67
            E L++E +EQ+  E + ++QEQ+  + +  L  ++   L    +   + Q +  R++ E 
Sbjct: 2809 ERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQERLERKKIEL 2868

Query: 68   KAKEEQKAKEAEA 80
              +E+    + E+
Sbjct: 2869 AEREQHIKSKLES 2881



>EAY08356.1 on XP_812751   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 952

 Score = 23.1 bits (48), Expect = 3.2,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 23/48 (47%)

Query: 36  RKLSEKQLAALAAGRQKNPRWQAKRAREEAEAKAKEEQKAKEAEAKKE 83
           RKL+  ++   + G +K P  Q+K      +     E K++E+ A  E
Sbjct: 698 RKLNAGKVTIPSLGVEKQPTEQSKGQVASTDVSVASESKSEESAASYE 745



>EAY08356.1 on XP_954179  TashAT2  (Establishment)  [Theileria annulata]
          Length = 1161

 Score = 22.7 bits (47), Expect = 3.9,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 25/50 (50%)

Query: 23  KEQKQEQKPERPKRKLSEKQLAALAAGRQKNPRWQAKRAREEAEAKAKEE 72
           + +K + +PE+PKRK    +       + K  R + ++ + E E+   EE
Sbjct: 438 RPRKHKPEPEQPKRKRGRPRKHKPEPEQPKRKRGRPRKQKPEPESDHSEE 487



>EAY08356.1 on XP_822014   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 950

 Score = 22.7 bits (47), Expect = 4.4,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 25/48 (52%)

Query: 3   QTIDVEALKKEIREQILSELKEQKQEQKPERPKRKLSEKQLAALAAGR 50
           +T+  E  + +++ Q+L E    ++ Q P +  +  S +++  L  GR
Sbjct: 191 ETLKEELHENKLKTQVLDECSASEERQCPSQAVKPDSSQRVMNLRVGR 238



>EAY08356.1 on XP_821405   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 851

 Score = 22.3 bits (46), Expect = 4.9,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 25/48 (52%)

Query: 3   QTIDVEALKKEIREQILSELKEQKQEQKPERPKRKLSEKQLAALAAGR 50
           +T+  E  + +++ Q+L E    ++ Q P +  +  S +++  L  GR
Sbjct: 136 ETLKEELHESKLKTQVLDECSASEERQCPSQAVKPDSSQRVMNLRVGR 183



>EAY08356.1 on CAA70921  MIC5  (Others)  [Toxoplasma gondii]
          Length = 231

 Score = 22.3 bits (46), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 12/31 (38%), Positives = 19/31 (61%)

Query: 12  KEIREQILSELKEQKQEQKPERPKRKLSEKQ 42
           KE +E+I   ++E K E  PE  +  ++EKQ
Sbjct: 135 KEFQEEIKEGVEETKHEDDPEMTRLMVTEKQ 165



>EAY08356.1 on XP_001350082  Rh2b  (Adhesin)  [Plasmodium falciparum]
          Length = 1115

 Score = 22.3 bits (46), Expect = 5.2,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 26/47 (55%)

Query: 8   EALKKEIREQILSELKEQKQEQKPERPKRKLSEKQLAALAAGRQKNP 54
           E LK++ +E++  E +EQ Q+++  R K +  ++Q        QK P
Sbjct: 611 EELKRQEQERLEREKQEQLQKEEELRKKEQEKQQQRNIQELEEQKKP 657



>EAY08356.1 on XP_822006   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 845

 Score = 22.3 bits (46), Expect = 5.9,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 24/48 (50%)

Query: 3   QTIDVEALKKEIREQILSELKEQKQEQKPERPKRKLSEKQLAALAAGR 50
           +T+  E  + +++ Q+L E    ++ Q P +     S +++  L  GR
Sbjct: 136 ETLKEELHESKLKTQVLDECSASEERQCPSQAVEPDSSQRVMKLRVGR 183



>EAY08356.1 on XP_829795  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 506

 Score = 21.9 bits (45), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 51  QKNPRWQAKRAREEAEAKAK 70
           +KN +W+AK  + E E   K
Sbjct: 415 EKNCKWEAKGGKSETEGTCK 434



>EAY08356.1 on XP_001609041  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1318

 Score = 21.9 bits (45), Expect = 8.1,   Method: Composition-based stats.
 Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 7   VEALKKEIREQILSELKEQKQEQKPERPKRKLSEK 41
           +EALKKE+ +Q L E+ E++Q    +  K  + EK
Sbjct: 788 LEALKKEMEKQ-LKEVLEKEQSDMDDITKWFIREK 821




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08362.1 hypothetical protein TVAG_352840 [Trichomonas
vaginalis G3]
         (74 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_844689  VSG  (Establishment)  [Trypanosoma brucei]                  24   1.0  
XP_844686  VSG  (Establishment)  [Trypanosoma brucei]                  24   1.3  
XP_820382   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   4.1  
XP_809825   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   4.1  
XP_810072   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   4.2  
XP_813236   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   4.5  
O00933  GRA7  (Establishment)  [Toxoplasma gondii]                     21   10.0 

>EAY08362.1 on XP_844689  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 509

 Score = 23.9 bits (50), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)

Query: 20 TEEQFSGDEA--ILMSAESPKTEISDRDLGLESQTALRAGRKSTPR 63
          TE +++   A  I+ +AE P+ EISD  +  E+   L A    T +
Sbjct: 48 TEAKYTAHLADHIVAAAEEPEREISDMQIYAEAWNLLAASTNQTDK 93



>EAY08362.1 on XP_844686  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 509

 Score = 23.9 bits (50), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)

Query: 20 TEEQFSGDEA--ILMSAESPKTEISDRDLGLESQTALRAGRKSTPR 63
          TE +++   A  I+ +AE P+ EISD  +  E+   L A    T +
Sbjct: 48 TEAKYTAHLADHIVAAAEEPEREISDMQIYAEAWNLLAASTNQTDK 93



>EAY08362.1 on XP_820382   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 729

 Score = 22.3 bits (46), Expect = 4.1,   Method: Composition-based stats.
 Identities = 10/26 (38%), Positives = 17/26 (65%)

Query: 5   NTTPAKALAIKKPEVTEEQFSGDEAI 30
           N+T   A+  +KPE  +E+ SGD ++
Sbjct: 682 NSTEMTAIKDRKPEDKKEKGSGDGSM 707



>EAY08362.1 on XP_809825   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 730

 Score = 22.3 bits (46), Expect = 4.1,   Method: Composition-based stats.
 Identities = 10/26 (38%), Positives = 17/26 (65%)

Query: 5   NTTPAKALAIKKPEVTEEQFSGDEAI 30
           N+T   A+  +KPE  +E+ SGD ++
Sbjct: 683 NSTEMTAIKDRKPEDKKEKGSGDGSM 708



>EAY08362.1 on XP_810072   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 731

 Score = 22.3 bits (46), Expect = 4.2,   Method: Composition-based stats.
 Identities = 10/26 (38%), Positives = 17/26 (65%)

Query: 5   NTTPAKALAIKKPEVTEEQFSGDEAI 30
           N+T   A+  +KPE  +E+ SGD ++
Sbjct: 684 NSTEMTAIKDRKPEDKKEKGSGDGSM 709



>EAY08362.1 on XP_813236   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 728

 Score = 22.3 bits (46), Expect = 4.5,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 15/23 (65%)

Query: 5   NTTPAKALAIKKPEVTEEQFSGD 27
           N+T   A+  +KPE  +E+ SGD
Sbjct: 681 NSTEMTAIKDRKPEDKKEKGSGD 703



>EAY08362.1 on O00933  GRA7  (Establishment)  [Toxoplasma gondii]
          Length = 236

 Score = 21.2 bits (43), Expect = 10.0,   Method: Compositional matrix adjust.
 Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 13/63 (20%)

Query: 17  PEVTEEQFSGDEAI--------LMSAESPKTEISDRDLGLESQTALRAGRKSTPREQRQD 68
           PE+TEEQ  GDE +        ++   +     +   +GL      R  R  +PR+ R  
Sbjct: 162 PELTEEQQRGDEPLTTGQNVGTVLGFAALAAAAAFLGMGL-----TRTYRHFSPRKNRSR 216

Query: 69  QPC 71
           QP 
Sbjct: 217 QPA 219




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08365.1 hypothetical protein TVAG_352870 [Trichomonas
vaginalis G3]
         (121 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_809902   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   6.2  
XP_821390   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   7.3  
XP_808639   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   8.1  

>EAY08365.1 on XP_809902   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 955

 Score = 23.1 bits (48), Expect = 6.2,   Method: Composition-based stats.
 Identities = 10/32 (31%), Positives = 16/32 (50%)

Query: 87  ANSVSDREFNIPNEIFKQKPVNLDEVENLNIE 118
           A S  D    + N +   +P+N DE+  LN +
Sbjct: 713 AGSEEDVSVTVTNVLLYNRPLNDDEINALNTK 744



>EAY08365.1 on XP_821390   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 940

 Score = 23.1 bits (48), Expect = 7.3,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 88  NSVSDREFNIPNEIFKQKPVNLDEVENLN 116
           + V D    + N +   +P+N DE+  LN
Sbjct: 691 SEVQDVSVTVTNVLLYNRPLNDDEISALN 719



>EAY08365.1 on XP_808639   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 949

 Score = 22.7 bits (47), Expect = 8.1,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 88  NSVSDREFNIPNEIFKQKPVNLDEVENLN 116
           + V D    + N +   +P+N DE+  LN
Sbjct: 699 SEVQDVSVTVTNVLLYNRPLNDDEISALN 727




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08373.1 hypothetical protein TVAG_268990 [Trichomonas
vaginalis G3]
         (278 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_815493   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   4.6  
XP_821425   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   6.2  
XP_001350413  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   7.1  

>EAY08373.1 on XP_815493   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 706

 Score = 25.4 bits (54), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 43  NWLVESSFLKYIDNISQNKLVELVTEKN 70
           NW    S LK+I N +Q +L+ +VT   
Sbjct: 202 NWGEPKSLLKHIPNHTQGQLIYVVTAGG 229



>EAY08373.1 on XP_821425   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 787

 Score = 25.0 bits (53), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 13/41 (31%), Positives = 18/41 (43%)

Query: 132 TLIETLYNKAINDDPHIQDEFTAETISEWLIQLGLLPPYGE 172
           TL     +K    +  ++  FT   I EW + L  LP Y E
Sbjct: 348 TLSRVWGSKQKGKEKGVRSGFTTAKIEEWDVMLVTLPVYSE 388



>EAY08373.1 on XP_001350413  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2860

 Score = 25.0 bits (53), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 26  KYSKSPNQLTSNQLAAYNWLVESSFLKYIDNISQNK-LVELVTE 68
           +Y K P+ + +       W +E  FLK I+    N+  +E + E
Sbjct: 641 QYEKQPDLVNNRHFTTLEWFLEGQFLKTIEKAYGNEDAIEKIQE 684




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08375.1 hypothetical protein TVAG_269010 [Trichomonas
vaginalis G3]
         (184 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_804722   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   0.41 

>EAY08375.1 on XP_804722   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 151

 Score = 26.9 bits (58), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 15/37 (40%), Positives = 20/37 (54%)

Query: 58 NVNNKKVSLALFRGEIQPAWEDPANAKGATYVLTVPN 94
          NV +K V+L   + E    WED +NA G   +L  PN
Sbjct: 31 NVRDKVVALMGIKKEQLDNWEDVSNAGGKYGLLLGPN 67




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08376.1 hypothetical protein TVAG_269020 [Trichomonas
vaginalis G3]
         (597 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_954179  TashAT2  (Establishment)  [Theileria annulata]              30   0.47 

>EAY08376.1 on XP_954179  TashAT2  (Establishment)  [Theileria annulata]
          Length = 1161

 Score = 30.0 bits (66), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 68/167 (40%), Gaps = 16/167 (9%)

Query: 127 QLILTYTVQADVSTGKDDIEVDLTSTSEIGFVDDKSEHWDFSETKNQEDQEKIQNFFDMR 186
           Q +     Q D+ TG  + + D+    +I    D  E  D          + I NF D+ 
Sbjct: 368 QEVENIDTQTDIPTGSIETQTDIQEVEDIDIQTDIQEVEDIG-------IQTIGNFSDI- 419

Query: 187 TKMRQESMLSQFGAIPSARSHQHKNLHQLPIPEHGSKPRFSQPNV-NPSQNVPEPAHAKT 245
           T++ ++    +       R  +HK   + P  + G +PR  +P    P +    P   K 
Sbjct: 420 TEVTKKHEKPEVPKRRPGRPRKHKPEPEQPKRKRG-RPRKHKPEPEQPKRKRGRPRKQK- 477

Query: 246 PEKSSDTSDLNSFLPAPKAEKQEDPAKLLKSLLNTNWGKSPLTYDEY 292
           PE  SD S+  S  P P+ ++ ED  K     L  +  K P ++D Y
Sbjct: 478 PEPESDHSE-ESTQPHPQEQETEDSIK----ALGPSPEKRPFSFDIY 519




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08377.1 IQ calmodulin-binding motif family protein
[Trichomonas vaginalis G3]
         (1235 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609167  variant erythrocyte surface antigen-1, alpha subun...    28   2.7  
XP_001347692  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   4.7  
XP_001349207  EBA-175  (Adhesin)  [Plasmodium falciparum]              27   6.9  
XP_966307  PfEMP1  (Establishment)  [Plasmodium falciparum]            27   9.7  

>EAY08377.1 on XP_001609167  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1317

 Score = 28.5 bits (62), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)

Query: 1036 REEMLAEVEKVKKKAMEQKINAARNVRKEHSMR-RENVMIGTI 1077
            ++E+ AEV+KV K  +  K+ AA+N  +E +   R N  +G +
Sbjct: 712  QKELEAEVQKVNKGGLNGKLGAAKNKLEELTRNGRSNGKLGEV 754



>EAY08377.1 on XP_001347692  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2994

 Score = 28.1 bits (61), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 89  PKWSEMKELTSFNISENNINELSEFRNIMGIPNLKQL 125
           P+W     LT  + S + IN L  F+NI G+ NLK+ 
Sbjct: 649 PRWVNSY-LTHQHFSSDFINALEAFKNIRGLENLKEC 684



>EAY08377.1 on XP_001349207  EBA-175  (Adhesin)  [Plasmodium falciparum]
          Length = 1462

 Score = 27.3 bits (59), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)

Query: 818 PRSNLMTPKLSKTNSRSVISPLFETRPRTSSIKTSNIKKIVGFDSSQSMTTNVFGGSLVD 877
           P+ N    +   + S+  +SP   +RP T +  TSN+ K+ G D   SM   V G S  D
Sbjct: 925 PKGNEQKKRDDDSLSKISVSPE-NSRPETDAKDTSNLLKLKG-DVDISMPKAVIGSSPND 982

Query: 878 SL 879
           ++
Sbjct: 983 NI 984



>EAY08377.1 on XP_966307  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2238

 Score = 26.9 bits (58), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 38/85 (44%), Gaps = 16/85 (18%)

Query: 759  KKEYGDQPIELTPLPKRPKKELTTSMRQIGQINELLPPEPE------PEQPQELTQTKVS 812
            K+E G++  E  P    PKK    S RQ  +  E LPP P       P+Q  E T+ K S
Sbjct: 1667 KQEEGEEKCE--PAQTAPKKPAADSERQTPE--EKLPPPPAAKEEKPPKQNAEKTKPKRS 1722

Query: 813  IQNTTPRS-NLMTPKLSKTNSRSVI 836
                 PR  + +TP L K    S I
Sbjct: 1723 -----PRPIDDLTPALKKAMLSSTI 1742




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08378.1 Ser/Thr protein phosphatase, putative
[Trichomonas vaginalis G3]
         (302 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08385.1 surface antigen BspA-like [Trichomonas
vaginalis G3]
         (1070 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_966305  PfEMP1  (Establishment)  [Plasmodium falciparum]            28   2.5  

>EAY08385.1 on XP_966305  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3954

 Score = 28.5 bits (62), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 3/38 (7%)

Query: 881  GDNLKHIGDEAFYRCNKLKDVKFPTNLIDIVKNAFFSC 918
            GDNLK + D+    CNK     F TNLI  +++   SC
Sbjct: 2329 GDNLKDVKDQKAENCNK---GDFITNLISKLQDKITSC 2363




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08387.1 hypothetical protein TVAG_269130 [Trichomonas
vaginalis G3]
         (421 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609618  variant erythrocyte surface antigen-1, alpha subun...    28   0.80 
XP_001611365  variant erythrocyte surface antigen-1, alpha subun...    27   2.4  
XP_001349035  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   3.5  
XP_001351079  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   4.9  
XP_827715  VSG  (Establishment)  [Trypanosoma brucei]                  25   6.6  
XP_001350410  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   9.1  

>EAY08387.1 on XP_001609618  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1325

 Score = 28.5 bits (62), Expect = 0.80,   Method: Composition-based stats.
 Identities = 46/197 (23%), Positives = 85/197 (43%), Gaps = 29/197 (14%)

Query: 128 LEHKYKQQIIDLKKQIENLMHQNLNLKREISDQNEKNSSEIHELLQRLEQYQNQIQDLEH 187
           +EH  K ++  +K ++  ++++ L    +I D  EK  + +  + + + Q  N  + LE 
Sbjct: 646 MEHDRKSRVEKVKGELGGVINK-LKALEKIGDGIEKAKALLVAIGEVVVQLGNAQEALEG 704

Query: 188 QNNEFQSIIIKKTTEIKEIQHNF-RRKDKMMKDQL--LKFEENIKQFEDKMKKEK----- 239
           ++ +    I K  T + E +      K ++ KD L  L  EE +K   DK+  +      
Sbjct: 705 KDKD---AIGKVKTALGEAKTELDSAKQELEKDGLDVLDGEEKLKGALDKLTTKNGGSSG 761

Query: 240 ---------EDLISQHNKEIE-------EIKSKNMETTKKMLTKYKAKLEKDFEEKTKAN 283
                    E   ++  KE++       E  +K +E  K+M  + K  LEK+     +  
Sbjct: 762 ILKEVDGALEKATNKDGKEVDPGKNKISEAINKVLEMLKEMEKQLKEVLEKEQSNMDENT 821

Query: 284 NLN-ILKSFEKLTETII 299
           NLN   K F K  + +I
Sbjct: 822 NLNGHEKGFHKAIKELI 838



>EAY08387.1 on XP_001611365  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1335

 Score = 26.9 bits (58), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 4/57 (7%)

Query: 287 ILKSFEKLTETIIKNHNEEIEQMRAELQQKIDIKAQKHTKENEEIQNLKKLIEGKNS 343
           +LK  EK  + ++KN  +EIEQ  +++    D    +  +E    + +K+LI   NS
Sbjct: 796 VLKEMEKQLKEVLKNIKDEIEQYESDM----DDNTGRIIQEKTFYKAVKELISICNS 848




 Score = 26.2 bits (56), Expect = 4.7,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 52/107 (48%), Gaps = 7/107 (6%)

Query: 183 QDLEHQNNEFQSIIIKKTTEIKEIQHNFRRKDKMMKDQLLKFEENIKQFEDKMKKEK--- 239
           ++++   NE    I K    +KE++   +   K +KD++ ++E ++     ++ +EK   
Sbjct: 777 KEVDPGKNEVSKAIHKVWEVLKEMEKQLKEVLKNIKDEIEQYESDMDDNTGRIIQEKTFY 836

Query: 240 ---EDLISQHNK-EIEEIKSKNMETTKKMLTKYKAKLEKDFEEKTKA 282
              ++LIS  N  +    KS + +  ++  +KY  K  + + + T +
Sbjct: 837 KAVKELISICNSPKCPSCKSHSNKCGRQPQSKYCDKCHQQYMDGTPS 883



>EAY08387.1 on XP_001349035  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2239

 Score = 26.6 bits (57), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 13/64 (20%)

Query: 179 QNQIQDLEHQNNEFQSIIIKKTTEIKEIQHNFRRKDKMMKDQLLKFEENIKQFEDKMKKE 238
           +NQ Q+ E Q N++++ I+ K+          RRK  +  D    ++  I+QF D +K+E
Sbjct: 377 KNQKQEFEKQKNKYENEILGKS----------RRKRSIGSDT---YDGYIEQFYDILKRE 423

Query: 239 KEDL 242
             D+
Sbjct: 424 YRDV 427



>EAY08387.1 on XP_001351079  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2203

 Score = 26.2 bits (56), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)

Query: 322 QKHTKENEEIQNLKKLIEGKNSSS--NKPRRLRRSHRSRPVSGAQSLIEGELPPENS 376
           QK+ K  E+  N K +  G NS++       LRRS R    + +Q+  E   PP  +
Sbjct: 914 QKYEKGREKFPNWKCIPSGDNSTTREGSESGLRRSRRD---ADSQTPGEKTTPPSGT 967



>EAY08387.1 on XP_827715  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 473

 Score = 25.4 bits (54), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 9/86 (10%)

Query: 278 EKTKANNLNILKSFEKLTETIIKNHNEEIEQMRA--ELQQKIDIKAQ-KHTKEN------ 328
           + ++ NN        +    + K H EE+  M+A  E++ ++++  Q KH K        
Sbjct: 297 QSSEVNNCGAGTGRGQGICVLYKGHGEELPWMKALVEVENEMEVLLQDKHNKSAKLERIK 356

Query: 329 EEIQNLKKLIEGKNSSSNKPRRLRRS 354
           E  Q ++KLI+G      +  R +RS
Sbjct: 357 ELSQEIEKLIKGDPGRGGQRGRQKRS 382



>EAY08387.1 on XP_001350410  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2178

 Score = 25.4 bits (54), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 46/114 (40%), Gaps = 19/114 (16%)

Query: 139 LKKQIENLMHQNLNLKREISDQNEKNS----SEIHELLQRLE-------------QYQNQ 181
           LK  I+    Q+   K    D N  +     S  HEL+Q  E                NQ
Sbjct: 326 LKDAIQKCRGQDGTGKDRYCDLNRYDCKRTISAKHELVQGEECKKCSVVCIPFGPWIDNQ 385

Query: 182 IQDLEHQNNEFQSIIIKKTTE-IKEIQHNFRRKDKMMKDQLLKF-EENIKQFED 233
            Q+ E Q N++ + I KK  E  KEI  N R+K  +       + EE  K F+D
Sbjct: 386 KQEFEKQKNKYTNEINKKHDETTKEISGNRRKKRSLTTKNYKGYDEEFYKIFKD 439




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08392.1 hypothetical protein TVAG_269180 [Trichomonas
vaginalis G3]
         (343 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_829788  VSG  (Establishment)  [Trypanosoma brucei]                  28   1.0  
XP_845136  VSG  (Establishment)  [Trypanosoma brucei]                  27   2.2  
XP_001350082  Rh2b  (Adhesin)  [Plasmodium falciparum]                 26   4.6  
XP_001350409  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   5.7  

>EAY08392.1 on XP_829788  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 473

 Score = 27.7 bits (60), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 8/56 (14%)

Query: 248 PLPDDPEERDRVMEEHDRLMREHRERMEEREMRRKKRAEEKMKNSDPRSNFKYSFD 303
            LPD     +R        + EH+E  E  E    K   E+  N+DP+ +++   D
Sbjct: 378 ALPDGTAAAER--------LNEHKELSESAEQACNKLNSEQKCNADPKCSYEIESD 425



>EAY08392.1 on XP_845136  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 481

 Score = 26.6 bits (57), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 13/50 (26%), Positives = 28/50 (56%), Gaps = 2/50 (4%)

Query: 252 DPEERDRVMEE--HDRLMREHRERMEEREMRRKKRAEEKMKNSDPRSNFK 299
           +P    +++ E  HDR +RE +++ E  E +R+ +A+ K + +   +  K
Sbjct: 360 EPAVLKQILSETLHDREVREQKQQAELLEAKRQLQAQNKSETAKEAAEAK 409



>EAY08392.1 on XP_001350082  Rh2b  (Adhesin)  [Plasmodium falciparum]
          Length = 1115

 Score = 25.8 bits (55), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 11/32 (34%), Positives = 25/32 (78%), Gaps = 1/32 (3%)

Query: 261 EEHDRLMREHRERME-EREMRRKKRAEEKMKN 291
           +E +RL RE +E+++ E E+R+K++ +++ +N
Sbjct: 616 QEQERLEREKQEQLQKEEELRKKEQEKQQQRN 647



>EAY08392.1 on XP_001350409  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2223

 Score = 25.4 bits (54), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 6/56 (10%)

Query: 154 DIFPCAIVDDKRSITTGYHDGVSCFMALGDQNSYVW----SANPSNWGDGNNAVKG 205
           ++ PC IVDD    T  + D  +C +      +Y W    + N SN   G N+  G
Sbjct: 919 EVNPCQIVDDLFKGTNKFSD--ACDLKYNKGKNYGWRCIPTGNTSNDNKGENSGNG 972




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08393.1 hypothetical protein TVAG_269190 [Trichomonas
vaginalis G3]
         (64 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_807850   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           21   6.6  

>EAY08393.1 on XP_807850   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 875

 Score = 21.2 bits (43), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 7/21 (33%), Positives = 12/21 (57%)

Query: 5   DTNCACQSAEQSIKQQAETWR 25
           D  CAC+ A+Q++ Q  +   
Sbjct: 157 DEKCACRIADQAVSQGVKNLH 177




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08402.1 putative Cys-rich domain containing protein
[Trichomonas vaginalis G3]
         (228 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]                 35   0.003
XP_818270   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.62 
XP_818196   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   0.74 
XP_954179  TashAT2  (Establishment)  [Theileria annulata]              26   2.1  
XP_954175  TashAT3  (Establishment)  [Theileria annulata]              26   2.2  
XP_812069   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   2.3  
XP_966307  PfEMP1  (Establishment)  [Plasmodium falciparum]            25   4.7  

>EAY08402.1 on XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]
          Length = 2112

 Score = 35.0 bits (79), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 21/74 (28%), Gaps = 2/74 (2%)

Query: 136 PP--PQGYAPPPPQGYAPPPPQGYAPPPPQGYAPPPPQEYAPPPPQEYAPPPPQGYAPPP 193
           PP  P    P  P    P  P    P  P    P  P E  P  P E  P  P    P  
Sbjct: 762 PPGSPSESTPGSPSESTPGSPSESTPGSPSESTPGNPSESTPGSPSESTPGNPSESTPGS 821

Query: 194 PQGYAVPPPPPPAP 207
           P       P    P
Sbjct: 822 PSESTPGSPSESTP 835




 Score = 34.7 bits (78), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 24/77 (31%)

Query: 151 PPPPQGYAPPPPQGYAPPPPQEYAPPPPQEYAPPPPQGYAPPPPQGYAVPPPPPPAPEHK 210
           P  P    P  P    P  P E  P  P E  P  P    P  P       P    P   
Sbjct: 763 PGSPSESTPGSPSESTPGSPSESTPGSPSESTPGNPSESTPGSPSESTPGNPSESTPGSP 822

Query: 211 KKKSSSSSSSSSSSSSS 227
            + +  S S S+  S +
Sbjct: 823 SESTPGSPSESTPCSGT 839




 Score = 34.3 bits (77), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 25/82 (30%), Gaps = 5/82 (6%)

Query: 143 PPPPQGYAPPPPQGYAPPPPQGYAPPPPQEYAPPPPQEYAPPPPQGYAPPPPQGYAVPPP 202
           P  P    P  P    P  P    P  P E  P  P E  P  P    P  P        
Sbjct: 763 PGSPSESTPGSPSESTPGSPSESTPGSPSESTPGNPSESTPGSPSESTPGNPS-----ES 817

Query: 203 PPPAPEHKKKKSSSSSSSSSSS 224
            P +P      S S S+  S +
Sbjct: 818 TPGSPSESTPGSPSESTPCSGT 839



>EAY08402.1 on XP_818270   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 380

 Score = 27.7 bits (60), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 29/74 (39%), Gaps = 3/74 (4%)

Query: 157 YAPPPPQGYAPPP-PQEYAPPPPQEYAPPPPQGYA--PPPPQGYAVPPPPPPAPEHKKKK 213
           Y  P  QG      P + AP P    A    QGYA   P P GY      PPA +  ++ 
Sbjct: 300 YLAPASQGILTSGGPGDTAPNPYAHLAEQTRQGYAYGQPLPPGYDYDQEAPPAEQQDREY 359

Query: 214 SSSSSSSSSSSSSS 227
             S  +  +  S S
Sbjct: 360 GVSLYTQDTRGSFS 373



>EAY08402.1 on XP_818196   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 841

 Score = 27.3 bits (59), Expect = 0.74,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 13/71 (18%)

Query: 171 QEYAPPPPQEYAPP---------PPQGYAPPPPQGYAVPPPPPPAPEHKK----KKSSSS 217
           +E A  P  E A P         P  G  P  P G    P P   PE +K    ++S+++
Sbjct: 728 EEDADSPSAEPASPFVARDQNAAPSAGELPDAPVGQTTSPQPQQEPETQKNTMVRESATT 787

Query: 218 SSSSSSSSSSS 228
               +++S  S
Sbjct: 788 QQVPANTSEGS 798



>EAY08402.1 on XP_954179  TashAT2  (Establishment)  [Theileria annulata]
          Length = 1161

 Score = 26.2 bits (56), Expect = 2.1,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 12/25 (48%)

Query: 148 GYAPPPPQGYAPPPPQGYAPPPPQE 172
           G  PPP  G  P    G  PPP Q+
Sbjct: 559 GAPPPPGDGSEPSDGPGDCPPPEQD 583




 Score = 25.4 bits (54), Expect = 3.1,   Method: Composition-based stats.
 Identities = 11/24 (45%), Positives = 11/24 (45%)

Query: 140 GYAPPPPQGYAPPPPQGYAPPPPQ 163
           G  PPP  G  P    G  PPP Q
Sbjct: 559 GAPPPPGDGSEPSDGPGDCPPPEQ 582



>EAY08402.1 on XP_954175  TashAT3  (Establishment)  [Theileria annulata]
          Length = 994

 Score = 26.2 bits (56), Expect = 2.2,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 12/25 (48%)

Query: 148 GYAPPPPQGYAPPPPQGYAPPPPQE 172
           G  PPP  G  P    G  PPP Q+
Sbjct: 541 GAPPPPGDGSEPSDGPGDCPPPEQD 565




 Score = 25.4 bits (54), Expect = 3.3,   Method: Composition-based stats.
 Identities = 11/24 (45%), Positives = 11/24 (45%)

Query: 140 GYAPPPPQGYAPPPPQGYAPPPPQ 163
           G  PPP  G  P    G  PPP Q
Sbjct: 541 GAPPPPGDGSEPSDGPGDCPPPEQ 564



>EAY08402.1 on XP_812069   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 948

 Score = 25.8 bits (55), Expect = 2.3,   Method: Composition-based stats.
 Identities = 11/30 (36%), Positives = 18/30 (60%)

Query: 199 VPPPPPPAPEHKKKKSSSSSSSSSSSSSSS 228
           VP P P AP+  ++ +S+ SS  S   +S+
Sbjct: 754 VPAPTPVAPQLTEQATSNGSSDPSGGDAST 783



>EAY08402.1 on XP_966307  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2238

 Score = 25.0 bits (53), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 17/58 (29%), Positives = 22/58 (37%), Gaps = 1/58 (1%)

Query: 151  PPPPQGYAPPPPQGYAPPPPQ-EYAPPPPQEYAPPPPQGYAPPPPQGYAVPPPPPPAP 207
            P   +G     P   AP  P  +     P+E  PPPP      PP+  A    P  +P
Sbjct: 1666 PKQEEGEEKCEPAQTAPKKPAADSERQTPEEKLPPPPAAKEEKPPKQNAEKTKPKRSP 1723




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08408.1 hypothetical protein TVAG_269340 [Trichomonas
vaginalis G3]
         (503 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08411.1 hypothetical protein TVAG_354700 [Trichomonas
vaginalis G3]
         (172 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_844158  VSG  (Establishment)  [Trypanosoma brucei]                  25   2.3  

>EAY08411.1 on XP_844158  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 490

 Score = 25.4 bits (54), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 16/48 (33%), Positives = 19/48 (39%)

Query: 38  TAFREYKNNLGSLSQYAGLQSKLEMEQLVSCDALIAELNRQLVLYEHS 85
           T F + K + GS S    L  K      V C   I E   + V Y HS
Sbjct: 278 TFFNQLKISKGSTSGRPTLLGKFGTSFSVGCTGEITEKEGRCVRYSHS 325




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08414.1 hypothetical protein TVAG_354730 [Trichomonas
vaginalis G3]
         (230 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609163  variant erythrocyte surface antigen-1, alpha subun...    26   2.7  
XP_001351561  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   2.9  
XP_001348946  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   2.9  
XP_828104  VSG  (Establishment)  [Trypanosoma brucei]                  25   4.9  

>EAY08414.1 on XP_001609163  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1360

 Score = 25.8 bits (55), Expect = 2.7,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 50/104 (48%), Gaps = 1/104 (0%)

Query: 94  LEKLNAISTELSKSEDTSKYVKEALNIILNIIDQETHFQPGKLKAASGTPIQSHDDENDS 153
           LEK+  +  +L  +++  +     +NI L  + + +      LK      I+   +  + 
Sbjct: 669 LEKIGEVVVQLGNAQEELEKSGGNVNIALAAVKKVSGVNGSDLKGVLEKVIEVVQEVVEK 728

Query: 154 KFKKENEKIDSEIQRLTQDKEAKQKQLEELELQIEKMEASRQEL 197
             +   EK+ + ++ + +  EA +++LEE +   E +EA++ EL
Sbjct: 729 LVEGVKEKVKA-LEEIKKTLEAAKEKLEEAKKTQEALEAAKGEL 771



>EAY08414.1 on XP_001351561  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3553

 Score = 25.8 bits (55), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 5/43 (11%)

Query: 155 FKKENEKIDSEIQRLTQDKEAKQKQLEELELQIEKMEASRQEL 197
           FK  NEK+ +EIQ+   ++E K      L+L+ +  EA+R ++
Sbjct: 960 FKTINEKLPNEIQKRYTNRENKH-----LDLRSDWWEANRHQV 997




 Score = 25.4 bits (54), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 9/97 (9%)

Query: 56  QLQNEQSILCEELNAERRRNENLSATFKCAQSLSQSQYLEKLNAISTELSKSEDTSKYVK 115
           +L NE     E+++ ER  +  ++       +  +S Y +       + S +  T K V 
Sbjct: 440 KLLNEGRYCKEKISGERNIDFTMTGD---KDAFYRSDYCQICPECGVQCSGTTCTPKKV- 495

Query: 116 EALNIILNIIDQETHFQPGKLKAASGTPIQSHDDEND 152
               I  N  D+ET ++PG  K    T + S D+E D
Sbjct: 496 ----IHPNCKDKET-YEPGDAKTTDITVLYSGDEEGD 527



>EAY08414.1 on XP_001348946  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3553

 Score = 25.8 bits (55), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 5/43 (11%)

Query: 155 FKKENEKIDSEIQRLTQDKEAKQKQLEELELQIEKMEASRQEL 197
           FK  NEK+ +EIQ+   ++E K      L+L+ +  EA+R ++
Sbjct: 960 FKTINEKLPNEIQKRYTNRENKH-----LDLRSDWWEANRHQV 997




 Score = 25.4 bits (54), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 9/97 (9%)

Query: 56  QLQNEQSILCEELNAERRRNENLSATFKCAQSLSQSQYLEKLNAISTELSKSEDTSKYVK 115
           +L NE     E+++ ER  +  ++       +  +S Y +       + S +  T K V 
Sbjct: 440 KLLNEGRYCKEKISGERNIDFTMTGD---KDAFYRSDYCQICPECGVQCSGTTCTPKKV- 495

Query: 116 EALNIILNIIDQETHFQPGKLKAASGTPIQSHDDEND 152
               I  N  D+ET ++PG  K    T + S D+E D
Sbjct: 496 ----IHPNCKDKET-YEPGDAKTTDITVLYSGDEEGD 527



>EAY08414.1 on XP_828104  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 501

 Score = 24.6 bits (52), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 20/86 (23%)

Query: 23  TSLNKYIAQRKQIKPTPLLPPKSPSDNPAETIAQLQNEQSILCEELNAERRRNENLSATF 82
           ++ N+YIA    I   P+LP ++    P   +A +      +C E            AT+
Sbjct: 10  STFNRYIAAAVAI-LLPILPQQAIQQLPPAVLADVNT----VCRE------------ATY 52

Query: 83  KCAQSLSQSQYLEKLNAISTELSKSE 108
               +++ +QY++KL  +S++L+ S+
Sbjct: 53  F---TVASNQYVQKLQQLSSDLTSSQ 75




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08415.1 Roadblock/LC7 domain containing protein
[Trichomonas vaginalis G3]
         (100 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609540  variant erythrocyte surface antigen-1, alpha subun...    24   2.3  
XP_843649  VSG  (Establishment)  [Trypanosoma brucei]                  24   2.5  
XP_829761  VSG  (Establishment)  [Trypanosoma brucei]                  23   5.7  

>EAY08415.1 on XP_001609540  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1349

 Score = 23.9 bits (50), Expect = 2.3,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 20/36 (55%)

Query: 39  TNTFSALVAHFISRTHKALEEIPEAGELEIVRIRSK 74
           TN F  ++   + R  K +E + +AG L+ V+ + K
Sbjct: 739 TNDFKGVLQEVLGRLEKLVEALEKAGGLKDVKEKVK 774



>EAY08415.1 on XP_843649  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 509

 Score = 23.9 bits (50), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 14/54 (25%)

Query: 61  PEAGELEIVRIRSK--------------KNELIIAPYGEFIFIAVQNPFSNKKQ 100
           PEAGEL+   +++K               NEL+ AP       A   PF++  Q
Sbjct: 167 PEAGELKTAEVQTKLHTATHIKLTSFKALNELVAAPKITITATAGTTPFASPGQ 220



>EAY08415.1 on XP_829761  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 477

 Score = 22.7 bits (47), Expect = 5.7,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 23/48 (47%)

Query: 26  EGVPIRTTFSADETNTFSALVAHFISRTHKALEEIPEAGELEIVRIRS 73
           EG  ++T    D  +  +  + H + +   A E +PEA + ++  I S
Sbjct: 313 EGAELKTQEFGDAGSKINQALWHVVEKLEVAKEALPEASDRKLGSINS 360




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08420.1 hypothetical protein TVAG_354790 [Trichomonas
vaginalis G3]
         (86 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08423.1 hypothetical protein TVAG_354820 [Trichomonas
vaginalis G3]
         (179 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAC97385  P270  (Establishment)  [Trichomonas vaginalis]               26   1.4  
AAD40228  P270  (Establishment)  [Trichomonas vaginalis]               25   1.8  
XP_806844   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   7.7  

>EAY08423.1 on AAC97385  P270  (Establishment)  [Trichomonas vaginalis]
          Length = 255

 Score = 25.8 bits (55), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 5/90 (5%)

Query: 89  HLKHGDRAFLFDTSEWEKENDTLIESKFKKPYVSLHNVDGQYDRHGSFCWYLKYSNGSAI 148
           + KHGD   L  ++ W + +      KF K       +DG  +       Y + ++   I
Sbjct: 20  YFKHGDPVTLPVSTNWNQNDKEQYSLKFVKQQHPPSEIDGYINE----ATYDQQNHQYTI 75

Query: 149 RANNEIKQEDPS-LFLKYIKAQPDKFVDPR 177
            A N I  +D + +++  IK   D+ + P+
Sbjct: 76  TAPNSIDSDDKNPIYIALIKTGSDEIISPQ 105




 Score = 25.8 bits (55), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 26/129 (20%)

Query: 12  GTISWKSPRSGKTIKVEQIVEKKKEEDKEKYFIYYTSKKGLPKFKWVDSTEVTAIKQSHD 71
            TI+    +  K   V+ I+EKK      KY   YT+K+ +PK + +  T          
Sbjct: 151 ATIAQPQYQIEKDNAVDIILEKKGS----KYTFTYTTKENIPKDENIKITLTL------- 199

Query: 72  SKKKKQKSSKDEIISSLHLKHGDRAFLF--DTSEWEKENDTLIESKFKKPYVSLHNVDGQ 129
           + K  Q  SK+ +I   HL+     +LF  D SE+   +  ++  KF+       N D  
Sbjct: 200 TDKAGQSVSKEVVI---HLRTSPHIYLFNSDKSEYSTGDVIVLVIKFE-------NFDS- 248

Query: 130 YDRHGSFCW 138
             R G F +
Sbjct: 249 --REGKFMY 255



>EAY08423.1 on AAD40228  P270  (Establishment)  [Trichomonas vaginalis]
          Length = 255

 Score = 25.4 bits (54), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 5/90 (5%)

Query: 89  HLKHGDRAFLFDTSEWEKENDTLIESKFKKPYVSLHNVDGQYDRHGSFCWYLKYSNGSAI 148
           + KHGD   L  ++ W + +      KF K       +DG  +       Y + ++   I
Sbjct: 145 YFKHGDPVTLPVSTNWNQNDKEQYSLKFVKQQHPPSEIDGYINE----ATYDQQNDQYTI 200

Query: 149 RANNEIKQEDPS-LFLKYIKAQPDKFVDPR 177
            A N I  +D + +++  IK   D+ + P+
Sbjct: 201 SAPNSIDSDDKNPIYIALIKTGSDEIISPQ 230



>EAY08423.1 on XP_806844   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 740

 Score = 23.9 bits (50), Expect = 7.7,   Method: Composition-based stats.
 Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 3/25 (12%)

Query: 58  VDSTEVTAIKQSHDSKKKKQKSSKD 82
           ++STE+TAIK   D K K +K S D
Sbjct: 684 LNSTEMTAIK---DRKPKDEKGSSD 705




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08427.1 hypothetical protein TVAG_354860 [Trichomonas
vaginalis G3]
         (151 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001350410  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   1.4  

>EAY08427.1 on XP_001350410  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2178

 Score = 25.8 bits (55), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 10/32 (31%)

Query: 44   TDCTIYYSSRKPNHYLIKQENGVTEIWDITEC 75
            TDCT+  SS          ENGVT   DI EC
Sbjct: 1529 TDCTVAGSS----------ENGVTNKKDIVEC 1550




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08429.1 hypothetical protein TVAG_354880 [Trichomonas
vaginalis G3]
         (83 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351561  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   1.2  
XP_001348946  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   1.2  
XP_001351876  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   1.4  
XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 22   9.2  

>EAY08429.1 on XP_001351561  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3553

 Score = 24.3 bits (51), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 9/27 (33%), Positives = 15/27 (55%)

Query: 46   YNNLESKYFDQTNDIWHINKCFIFSLM 72
            Y N E+K+ D  +D W  N+  ++  M
Sbjct: 975  YTNRENKHLDLRSDWWEANRHQVWRAM 1001



>EAY08429.1 on XP_001348946  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3553

 Score = 24.3 bits (51), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 9/27 (33%), Positives = 15/27 (55%)

Query: 46   YNNLESKYFDQTNDIWHINKCFIFSLM 72
            Y N E+K+ D  +D W  N+  ++  M
Sbjct: 975  YTNRENKHLDLRSDWWEANRHQVWRAM 1001



>EAY08429.1 on XP_001351876  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3164

 Score = 23.9 bits (50), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 8/29 (27%), Positives = 13/29 (44%)

Query: 44  ADYNNLESKYFDQTNDIWHINKCFIFSLM 72
             Y N + KY +   D W  N+  ++  M
Sbjct: 959 GKYTNTDGKYLELREDWWEANRAKVWEAM 987



>EAY08429.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 21.6 bits (44), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 3/54 (5%)

Query: 20   ISHNIDFVTFLMNEYD-IEIHL-GYCADYNNLES-KYFDQTNDIWHINKCFIFS 70
            IS+NID V+  +NE D I+ +   Y   ++N+E  K  D T + + + K  I  
Sbjct: 2055 ISNNIDIVSNKLNEIDAIQYNFEKYKEIFDNVEEYKTLDDTKNAYIVKKAEILK 2108




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08434.1 hypothetical protein TVAG_354930 [Trichomonas
vaginalis G3]
         (428 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609618  variant erythrocyte surface antigen-1, alpha subun...    27   3.6  
XP_001352170  MSP1  (Invasion)  [Plasmodium falciparum]                27   3.6  
XP_001351877  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   6.5  
XP_001351080  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   6.6  
XP_966307  PfEMP1  (Establishment)  [Plasmodium falciparum]            26   6.8  
XP_001351564  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   7.3  
XP_001347690  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   7.5  

>EAY08434.1 on XP_001609618  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1325

 Score = 26.6 bits (57), Expect = 3.6,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)

Query: 171 DAQKVDKSEANV-EAYENMVETVTQLHKQLDDCLEKYNS 208
           D ++VD  +  + EA   ++E + ++ KQL + LEK  S
Sbjct: 777 DGKEVDPGKNKISEAINKVLEMLKEMEKQLKEVLEKEQS 815



>EAY08434.1 on XP_001352170  MSP1  (Invasion)  [Plasmodium falciparum]
          Length = 1720

 Score = 26.6 bits (57), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 17/47 (36%), Positives = 26/47 (55%)

Query: 114 EFFIPKIAEIKNQYEKNVNNIKSTYGKSLETLKQHQKTYSEKLDTFY 160
           + FI  I +  +  EKN+N+ K    K LE  ++ +K Y E L+ FY
Sbjct: 471 KIFINNIKKKIDLEEKNINHTKEQNKKLLEDYEKSKKDYEELLEKFY 517



>EAY08434.1 on XP_001351877  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2270

 Score = 25.8 bits (55), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 10/22 (45%), Positives = 16/22 (72%)

Query: 30   MDTILNTLDQFNKSYQQLQAEM 51
            MDTIL  LD++N+ Y  +Q ++
Sbjct: 2203 MDTILEDLDKYNEPYYDVQDDI 2224



>EAY08434.1 on XP_001351080  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2209

 Score = 25.8 bits (55), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 10/22 (45%), Positives = 16/22 (72%)

Query: 30   MDTILNTLDQFNKSYQQLQAEM 51
            MDTIL  LD++N+ Y  +Q ++
Sbjct: 2142 MDTILEDLDKYNEPYYDVQDDI 2163



>EAY08434.1 on XP_966307  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2238

 Score = 25.8 bits (55), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 6/76 (7%)

Query: 114  EFFIPKIAEIKNQYEKNV---NNIKSTYGKSLETLKQHQKTYSEKLDTFYKNCQK-LEEL 169
            E  IPKIA + +Q   NV   +   +  G S E   Q++  + + +D      QK +EE 
Sbjct: 1559 EELIPKIAVVNDQ--DNVIKLSKFDNPCGCSFEANSQNKNGHKDAIDCMITKLQKKIEEC 1616

Query: 170  YDAQKVDKSEANVEAY 185
                 V+K+E   + Y
Sbjct: 1617 QSKHSVEKTEKECQEY 1632



>EAY08434.1 on XP_001351564  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2207

 Score = 25.4 bits (54), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 10/22 (45%), Positives = 16/22 (72%)

Query: 30   MDTILNTLDQFNKSYQQLQAEM 51
            MDTIL  LD++N+ Y  +Q ++
Sbjct: 2140 MDTILEDLDKYNEPYYDVQDDI 2161



>EAY08434.1 on XP_001347690  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2215

 Score = 25.4 bits (54), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 10/22 (45%), Positives = 16/22 (72%)

Query: 30   MDTILNTLDQFNKSYQQLQAEM 51
            MDTIL  LD++N+ Y  +Q ++
Sbjct: 2148 MDTILEDLDKYNEPYYDVQDDI 2169




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08439.1 CAMK family protein kinase [Trichomonas
vaginalis G3]
         (330 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    38   6e-04

>EAY08439.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 37.7 bits (86), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/151 (21%), Positives = 61/151 (40%), Gaps = 6/151 (3%)

Query: 65  LVNCVDVFED--SKTFYAAYELPNGTPLIETIHTGSRIKEERAAYILNQLLQAVKYLHQS 122
           ++  +D+ +D  S+T    +E  N T   +T++    I++    Y + QLL+A+ Y H  
Sbjct: 110 IIKLLDIVKDPQSRTPSLIFEHVNNTDF-KTLYPTLTIQD--IKYYIYQLLKAMNYCHSQ 166

Query: 123 GFGNIQINPQTIFVTPNDDV-TITDYSFLANIPYNERLQTRPEILENAPPEFFKSGSYVA 181
           G  +  I P  + +     +  + D+         +    R        PE      Y  
Sbjct: 167 GIMHRDIKPHNVMIDHEKKILRLIDWGLAEFYHPEQEYSVRVATRYYKGPELLVDMRYYD 226

Query: 182 SQANVWSIGVIAYILVTGSHPFKTNTHSYNQ 212
              ++WSIG +   ++    PF     +Y+Q
Sbjct: 227 YSLDIWSIGCMLAGIIFKKEPFFYGHDNYDQ 257




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08443.1 Kinesin motor domain containing protein
[Trichomonas vaginalis G3]
         (657 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_804512   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   4.4  
XP_802557   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   6.2  
XP_805204   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   6.7  

>EAY08443.1 on XP_804512   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 310

 Score = 26.6 bits (57), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 11/26 (42%), Positives = 19/26 (73%)

Query: 13  RPTTDFAGENIKILDDHQTVAVNIDK 38
           RPTT  AG+++ +L  +Q+V  ++DK
Sbjct: 163 RPTTVVAGDSVYMLLRNQSVTPSVDK 188



>EAY08443.1 on XP_802557   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 608

 Score = 26.6 bits (57), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 11/26 (42%), Positives = 19/26 (73%)

Query: 13 RPTTDFAGENIKILDDHQTVAVNIDK 38
          RPTT  AG+++ +L  +Q+V  ++DK
Sbjct: 27 RPTTVVAGDSVYMLLRNQSVTPSVDK 52



>EAY08443.1 on XP_805204   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 978

 Score = 26.2 bits (56), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 11/26 (42%), Positives = 19/26 (73%)

Query: 13  RPTTDFAGENIKILDDHQTVAVNIDK 38
           RPTT  AG+++ +L  +Q+V  ++DK
Sbjct: 133 RPTTVVAGDSVYMLLRNQSVTPSVDK 158




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08444.1 F5/8 type C domain containing protein
[Trichomonas vaginalis G3]
         (176 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609034  variant erythrocyte surface antigen-1, alpha subun...    26   1.7  
XP_817001   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   3.4  
XP_804648   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   3.8  
XP_806774   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   4.8  
XP_818889   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   5.1  
XP_805203   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   8.5  

>EAY08444.1 on XP_001609034  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1313

 Score = 25.8 bits (55), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 3/43 (6%)

Query: 60   SNFRSHWFSFRENPWVTIDFKEVSVKLSGYTLKTYSGGENYGH 102
            ++ RSHW    E+ W  + +K ++ +  G  L+   G EN+G 
Sbjct: 1265 THMRSHWLRGGEHQWQCMWYKVMTGRKGGPVLE---GIENFGQ 1304



>EAY08444.1 on XP_817001   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 928

 Score = 25.0 bits (53), Expect = 3.4,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 4/53 (7%)

Query: 90  TLKTYSGGENYGHMRSWDLEVSNDNTNWINIHSVRDSNDLNADSVHKYYDVTS 142
           TL  Y+  +  G +  W      DNT+ ++I  V   +D  A S   Y  VTS
Sbjct: 374 TLPVYAKEKEKGELHLW----LTDNTHIVDIGPVSGKDDDAAASALLYKSVTS 422



>EAY08444.1 on XP_804648   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 827

 Score = 24.6 bits (52), Expect = 3.8,   Method: Composition-based stats.
 Identities = 10/32 (31%), Positives = 16/32 (50%)

Query: 70  RENPWVTIDFKEVSVKLSGYTLKTYSGGENYG 101
           +  PWV     +V++ L G  +  Y  GE+ G
Sbjct: 633 KSRPWVAKKEHQVALMLQGKKISVYIDGESLG 664



>EAY08444.1 on XP_806774   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 837

 Score = 24.3 bits (51), Expect = 4.8,   Method: Composition-based stats.
 Identities = 8/19 (42%), Positives = 12/19 (63%)

Query: 96  GGENYGHMRSWDLEVSNDN 114
           GG+N  H R WD E + ++
Sbjct: 635 GGQNKEHSRDWDPETTKED 653



>EAY08444.1 on XP_818889   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 750

 Score = 24.3 bits (51), Expect = 5.1,   Method: Composition-based stats.
 Identities = 8/19 (42%), Positives = 12/19 (63%)

Query: 96  GGENYGHMRSWDLEVSNDN 114
           GG+N  H R WD E + ++
Sbjct: 548 GGQNKEHSRDWDPETTKED 566



>EAY08444.1 on XP_805203   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 844

 Score = 23.5 bits (49), Expect = 8.5,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 73  PWVTIDFKEVSVKLSGYTLKTYSGGENYG 101
           PWV     +V++ L G  +  Y  GE+ G
Sbjct: 632 PWVPKKEHQVALMLQGNKISVYIDGESLG 660




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08445.1 hypothetical protein TVAG_355040 [Trichomonas
vaginalis G3]
         (454 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08446.1 hypothetical protein TVAG_355050 [Trichomonas
vaginalis G3]
         (60 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001348176  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   1.0  

>EAY08446.1 on XP_001348176  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3119

 Score = 23.5 bits (49), Expect = 1.0,   Method: Composition-based stats.
 Identities = 8/12 (66%), Positives = 10/12 (83%)

Query: 12   RIDNEKYLRKHP 23
            ++DNEKY  KHP
Sbjct: 1674 KVDNEKYAFKHP 1685




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08451.1 hypothetical protein TVAG_355100 [Trichomonas
vaginalis G3]
         (176 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001610568  variant erythrocyte surface antigen-1, alpha subun...    26   1.4  
XP_817001   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   4.7  
XP_808156   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   5.0  
XP_815318   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   6.0  
XP_001609540  variant erythrocyte surface antigen-1, alpha subun...    24   7.2  
XP_001351517  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   8.4  
XP_821526   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   9.5  

>EAY08451.1 on XP_001610568  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1329

 Score = 26.2 bits (56), Expect = 1.4,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 17/24 (70%)

Query: 27  QSMLEHQQNIMEDVYRDLGDFKEI 50
           + +LEH + I+E V  D+GD K++
Sbjct: 492 KQILEHSKGILERVAPDVGDKKQL 515



>EAY08451.1 on XP_817001   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 928

 Score = 24.3 bits (51), Expect = 4.7,   Method: Composition-based stats.
 Identities = 11/32 (34%), Positives = 19/32 (59%)

Query: 1   MLDGVLSIARDGTQKLEEQTKIQAKIQSMLEH 32
           M DG L    +GT+K  ++T+ + K  S++ H
Sbjct: 245 MDDGTLLFPLEGTKKKNDETEKEVKTASLIIH 276



>EAY08451.1 on XP_808156   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1058

 Score = 24.3 bits (51), Expect = 5.0,   Method: Composition-based stats.
 Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 24/92 (26%)

Query: 83  PKSQNSQISDLIASLILNIQDAVIEMGFAHTEKGEYEVEI-------------------- 122
           P +++++I+D+  S   N ++   E G A+   GE    +                    
Sbjct: 843 PSTKSTEIADVEGSAESNDKEQPEEEGEANGRSGETTSPVGASLSMETAAGPVDGEHQVR 902

Query: 123 --SELLTIEDDIKSTIDSLT--EKGLYLESSD 150
             +EL T  DD++ST +  T  E+ L LE+ D
Sbjct: 903 QSTELATENDDVRSTGNGTTGAEESLSLEAGD 934



>EAY08451.1 on XP_815318   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 587

 Score = 23.9 bits (50), Expect = 6.0,   Method: Composition-based stats.
 Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 24/92 (26%)

Query: 83  PKSQNSQISDLIASLILNIQDAVIEMGFAHTEK---------------------GEYEVE 121
           P +++++I+D+  S   N ++   E G A+                        GE++V+
Sbjct: 372 PSTKSTEIADVEGSAESNDKEQPEEEGEANGRSGETTSPVGASLSMETAAGPVDGEHQVQ 431

Query: 122 IS-ELLTIEDDIKSTIDSLT--EKGLYLESSD 150
            S EL T  DD++ST +  T  E+ L LE+ D
Sbjct: 432 QSTELATENDDVRSTGNGTTGAEESLSLEAGD 463



>EAY08451.1 on XP_001609540  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1349

 Score = 23.9 bits (50), Expect = 7.2,   Method: Composition-based stats.
 Identities = 8/22 (36%), Positives = 16/22 (72%)

Query: 29  MLEHQQNIMEDVYRDLGDFKEI 50
           +L+H + +M+ V  D+GD K++
Sbjct: 494 ILQHSKEVMKKVAPDVGDKKQL 515



>EAY08451.1 on XP_001351517  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2193

 Score = 23.9 bits (50), Expect = 8.4,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 20/34 (58%)

Query: 17   EEQTKIQAKIQSMLEHQQNIMEDVYRDLGDFKEI 50
            EE+   Q+K+Q   E   + +  ++  LGD+++I
Sbjct: 1054 EEEQPPQSKLQQTGEIPPDFLRQMFYTLGDYRDI 1087



>EAY08451.1 on XP_821526   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 983

 Score = 23.5 bits (49), Expect = 9.5,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 19/37 (51%)

Query: 111 AHTEKGEYEVEISELLTIEDDIKSTIDSLTEKGLYLE 147
           A  E G+Y +   +L    +D++  + +  EK  Y+E
Sbjct: 443 AAAEGGKYSIAFLDLTERLEDVRKVLAAWKEKDAYIE 479




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08453.1 hypothetical protein TVAG_355120 [Trichomonas
vaginalis G3]
         (454 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAX07982  alpha-7.1 giardin  (Others)  [Giardia duodenalis]            27   3.0  
AAX07984  alpha-7.2 giardin  (Others)  [Giardia duodenalis]            27   3.1  
XP_650534  HgI  (Adhesin)  [Entamoeba histolytica]                     26   5.9  
XP_656181  Hgl2  (Adhesin)  [Entamoeba histolytica]                    25   7.8  

>EAY08453.1 on AAX07982  alpha-7.1 giardin  (Others)  [Giardia duodenalis]
          Length = 255

 Score = 26.6 bits (57), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 117 TIQCDINKAEMWPSPCRPLYSR 138
           T +CD  ++  WP  CRP  +R
Sbjct: 65  TARCDKGRSIYWPDLCRPHAAR 86



>EAY08453.1 on AAX07984  alpha-7.2 giardin  (Others)  [Giardia duodenalis]
          Length = 255

 Score = 26.6 bits (57), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 117 TIQCDINKAEMWPSPCRPLYSR 138
           T +CD  ++  WP  CRP  +R
Sbjct: 65  TARCDKGRSIYWPDLCRPHAAR 86



>EAY08453.1 on XP_650534  HgI  (Adhesin)  [Entamoeba histolytica]
          Length = 1207

 Score = 25.8 bits (55), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 23/92 (25%), Positives = 34/92 (36%), Gaps = 19/92 (20%)

Query: 162 EDISMTIPVSKCDDNL--------GMKQLFSRYVIDDIEMDSLMEFNQERMIWWFDECNT 213
           EDI  TI  +KC   +        G    F     DDI+  S++E   E+ +     C+ 
Sbjct: 447 EDIGCTIEQNKCVSTVKCLEPYCSGNNCAFRSNCTDDIKPSSIIESGVEKFVCRTYSCDR 506

Query: 214 LMG-----------FCNHLKNKCIELSLESGV 234
             G           +C  L +KC E    +G 
Sbjct: 507 TNGECIPNTLQSSSYCPKLSSKCEEYYCSAGT 538



>EAY08453.1 on XP_656181  Hgl2  (Adhesin)  [Entamoeba histolytica]
          Length = 1286

 Score = 25.4 bits (54), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 15/59 (25%), Positives = 27/59 (45%)

Query: 396 VSYIRMAFKYDITEYSLMISKSISFLKNIDKQVDWDDVINNDMANKSIIKDDFANTNSH 454
           ++Y      YD+     +  +SI+F    ++  D+ D  N +  +K II     N N+H
Sbjct: 159 MTYATKTEAYDVCRMDFIGGRSITFRSFNNENKDFIDQYNTNTTSKCIIDVHKNNVNTH 217




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08454.1 Ser/Thr protein phosphatase, putative
[Trichomonas vaginalis G3]
         (251 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08455.1 hypothetical protein TVAG_355140 [Trichomonas
vaginalis G3]
         (843 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_804892   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   1.3  
XP_806267   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   1.9  
XP_802788   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.1  
XP_804331   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   2.1  
XP_001609040  variant erythrocyte surface antigen-1, alpha subun...    28   2.7  
XP_001609167  variant erythrocyte surface antigen-1, alpha subun...    28   3.4  
XP_829796  VSG  (Establishment)  [Trypanosoma brucei]                  27   3.6  
XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]                 27   4.7  
XP_001349033  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   4.8  
XP_828093  VSG  (Establishment)  [Trypanosoma brucei]                  27   5.5  
XP_829764  VSG  (Establishment)  [Trypanosoma brucei]                  26   9.4  

>EAY08455.1 on XP_804892   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1046

 Score = 28.9 bits (63), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 4/86 (4%)

Query: 475 RNQGGSSLDNASPRSPAGSNNGDF--NSALAVMNPAVSSAEAHAM-MMDLSEINSFRGVI 531
           R  G   LDN      AG   G     S + V     + AEAH     D S+  SF G+ 
Sbjct: 77  RGIGWEKLDNWKDVFDAGGKYGSIRGPSLVEVQGHVFAIAEAHCKDGGDCSKF-SFTGIA 135

Query: 532 SQKIDVSNFKARNAILQANAKLNGQE 557
           S+ + +S       IL ANA + G +
Sbjct: 136 SKYLGLSGVAGPTEILTANASIFGAD 161



>EAY08455.1 on XP_806267   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 182

 Score = 27.7 bits (60), Expect = 1.9,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 34/85 (40%), Gaps = 2/85 (2%)

Query: 475 RNQGGSSLDNASPRSPAGSNNGDFN--SALAVMNPAVSSAEAHAMMMDLSEINSFRGVIS 532
           R  G   LDN    S AG   G     S + +     + AE H          SF G+ S
Sbjct: 79  RGIGWEKLDNWEDVSGAGGKYGSLRGPSLVDLQGHVFAIAEVHCRDGGECSDVSFTGIAS 138

Query: 533 QKIDVSNFKARNAILQANAKLNGQE 557
           + +D+S       IL A+A + G +
Sbjct: 139 KYLDLSGVADPTEILTADASIFGAD 163



>EAY08455.1 on XP_802788   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 161

 Score = 27.3 bits (59), Expect = 2.1,   Method: Composition-based stats.
 Identities = 24/83 (28%), Positives = 33/83 (39%), Gaps = 2/83 (2%)

Query: 475 RNQGGSSLDNASPRSPAGSNNGDFN--SALAVMNPAVSSAEAHAMMMDLSEINSFRGVIS 532
           R  G   LDN    S AG   G     S + +     + AE H          SF G+ S
Sbjct: 79  RGIGWEKLDNWEDVSGAGGKYGSLRGPSLVDLQGHVFAIAEVHCRDGGECSDVSFTGIAS 138

Query: 533 QKIDVSNFKARNAILQANAKLNG 555
           + +D+S       IL A+A + G
Sbjct: 139 KYLDLSGVADPTEILTADASIFG 161



>EAY08455.1 on XP_804331   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 213

 Score = 27.7 bits (60), Expect = 2.1,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 34/85 (40%), Gaps = 2/85 (2%)

Query: 475 RNQGGSSLDNASPRSPAGSNNGDFN--SALAVMNPAVSSAEAHAMMMDLSEINSFRGVIS 532
           R  G   LDN    S AG   G     S + +     + AE H          SF G+ S
Sbjct: 79  RGIGWEKLDNWEDVSGAGGKYGSLRGPSLVDLQGHVFAIAEVHCRDGGECSDVSFTGIAS 138

Query: 533 QKIDVSNFKARNAILQANAKLNGQE 557
           + +D+S       IL A+A + G +
Sbjct: 139 KYLDLSGVADPTEILTADASIFGAD 163



>EAY08455.1 on XP_001609040  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1335

 Score = 28.1 bits (61), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 4/67 (5%)

Query: 137 KNKEVVDKLSADLKNAQAQIKQNENQLGELKTSNKDLKNTIIQLNKQITELK---DKNQS 193
           K KE +D++   L N QA++K+ + +LGEL    K   + ++        L+   D  Q 
Sbjct: 702 KAKEGLDQVKDGL-NGQAELKEAKGKLGELTNGGKGALHILVDSGNTPGSLQQIVDSGQE 760

Query: 194 LQKDVNT 200
            +KD ++
Sbjct: 761 WRKDYSS 767



>EAY08455.1 on XP_001609167  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1317

 Score = 27.7 bits (60), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 4/52 (7%)

Query: 624 GKEEESAEFINNSAEQITTL----KSQVDQYESQIKDERRQKEELQKSLDKL 671
           GKE    E I   A  +T L    + Q   YE + KD+  QKE + + L+ L
Sbjct: 35  GKELSGDECICGLASAVTDLLQSVELQYHGYEGEAKDKGPQKERVTECLNGL 86



>EAY08455.1 on XP_829796  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 513

 Score = 27.3 bits (59), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 5/56 (8%)

Query: 268 QELRNEKLKKSTADTISKLQTTISNLKEENEAL-----RQSKQESEESESSMEVEL 318
           +ELRN    K   D  S+++  ++++  + EAL      Q+K ESE + +S+E  L
Sbjct: 127 EELRNSGFLKLNDDDKSEVRAVMADVTRQAEALISHFRAQTKPESEPTATSIEATL 182



>EAY08455.1 on XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]
          Length = 2112

 Score = 27.3 bits (59), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 10/24 (41%), Positives = 17/24 (70%)

Query: 478  GGSSLDNASPRSPAGSNNGDFNSA 501
            GG+ ++ ++P SP+ SNN D +S 
Sbjct: 2006 GGTEVEGSTPSSPSDSNNNDGSSG 2029



>EAY08455.1 on XP_001349033  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2064

 Score = 27.3 bits (59), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 15/36 (41%), Positives = 18/36 (50%)

Query: 639  QITTLKSQVDQYESQIKDERRQKEELQKSLDKLKAE 674
            +  T KSQ  QYE  I   + Q E+     DKL AE
Sbjct: 1471 ECETCKSQCGQYEKFITQWKSQWEKQSGKYDKLYAE 1506



>EAY08455.1 on XP_828093  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 512

 Score = 26.9 bits (58), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 16/43 (37%), Positives = 22/43 (51%)

Query: 691 LRETTQHEKDLSEELTSVKGELQRLLDAVKINKTNETNITAQL 733
           L+   Q    LSEEL  V G   R++D +    TN+TN   +L
Sbjct: 30  LKTVWQPVCGLSEELDVVGGNSLRIIDDILSAATNQTNTAIRL 72



>EAY08455.1 on XP_829764  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 434

 Score = 26.2 bits (56), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 3/37 (8%)

Query: 368 SEAQTKESDLRAIIQKHF---EGVDDTTEWVVLIAMA 401
           SE Q+K+ DL  +++KH+   +G  D   W  L  + 
Sbjct: 327 SELQSKDQDLTQLVEKHYGNEQGTFDNKVWGTLATLG 363




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08456.1 hypothetical protein TVAG_355150 [Trichomonas
vaginalis G3]
         (801 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_802428   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   2.1  
XP_001609618  variant erythrocyte surface antigen-1, alpha subun...    27   7.8  

>EAY08456.1 on XP_802428   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 279

 Score = 27.7 bits (60), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 9/85 (10%)

Query: 191 YRSKISKFLEPSLS---GPLMELAKDETILAPLKSNNQSLLLNNLIKYADKMIQNMNDNI 247
           ++      + PS S   G + E A D   LA   S  Q+   + LI         M  + 
Sbjct: 95  FKQTFPDIIVPSTSAGVGKVEEEAPDSGALASASSQTQNAGSHELIGT------EMPFSG 148

Query: 248 QLFPPEVSLLMRSFGDTADDEETRI 272
           + FPP + L +    DTAD+E  RI
Sbjct: 149 EHFPPNIDLPLMGQVDTADEESPRI 173



>EAY08456.1 on XP_001609618  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1325

 Score = 26.6 bits (57), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 18/120 (15%)

Query: 460 TALFEFLRFAEIDSLA---PKDAASFLEHHQR-KAHLEGDFMKNTYLNNILRKLAEVSDS 515
           TAL E     E+DS      KD    L+  ++ K  L+    KN   + IL+        
Sbjct: 715 TALGEAK--TELDSAKQELEKDGLDVLDGEEKLKGALDKLTTKNGGSSGILK-------- 764

Query: 516 RQILPALEDELNRHRLFIAKCRDQITQIIVMINKISNKIKELGKQGKQLLPIMHSNLLES 575
            ++  ALE   N+    +   +++I++    INK+   +KE+ KQ K++L    SN+ E+
Sbjct: 765 -EVDGALEKATNKDGKEVDPGKNKISE---AINKVLEMLKEMEKQLKEVLEKEQSNMDEN 820




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08460.1 4Fe-4S binding domain containing protein
[Trichomonas vaginalis G3]
         (496 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_804625   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   1.6  
XP_001608668  variant erythrocyte surface antigen-1, alpha subun...    27   2.4  
XP_001609315  variant erythrocyte surface antigen-1, alpha subun...    27   3.7  
XP_001611147  variant erythrocyte surface antigen-1, alpha subun...    26   6.4  
XP_001351561  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   8.4  
XP_001348946  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   8.4  

>EAY08460.1 on XP_804625   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1042

 Score = 28.1 bits (61), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 6/64 (9%)

Query: 46  KCQGTGDCRLCKVLVNGVPRQSCEVIAKDGMIISTKDPNIKNNIENKVKIYASFDPDVEK 105
           K  G GD R    LV G        + +DG I+       KN+ E ++ +  SFDP  +K
Sbjct: 236 KPHGRGDSRSLTELVGG---GGSGAVMRDGTIVFPM--QAKNSDEERILLSMSFDPS-DK 289

Query: 106 AYHL 109
            + L
Sbjct: 290 KWEL 293



>EAY08460.1 on XP_001608668  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1337

 Score = 27.3 bits (59), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 4/65 (6%)

Query: 249 INDYKIIKNSTKLIN---HSTQFYQRTFGSFCPTLTRKYVEYVMNPEKKIFEYLTSPGLD 305
           I D K I NS K  +   HST+  Q+     CPT  ++Y++   +P +   E    PG  
Sbjct: 872 ITDLKEIYNSPKCPSCESHSTKCGQQPQSKTCPTCHQQYMDGTPSPLQAFLEDRL-PGFS 930

Query: 306 VTTFV 310
            +  V
Sbjct: 931 CSAVV 935



>EAY08460.1 on XP_001609315  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1338

 Score = 26.6 bits (57), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 10/77 (12%)

Query: 224 NSIDLENFSKFLKNLGFDYFLDQGLINDYKIIKNSTKLI---NHSTQFYQRTFGSFCPTL 280
           N I+L +F K LK      FL+  +I+D   I  ST+ +   +HST+  +     +C T 
Sbjct: 828 NKIELISFIKELKE-----FLN--IIDDMFDIVGSTRCVHCRDHSTKCGKEPVSKYCNTC 880

Query: 281 TRKYVEYVMNPEKKIFE 297
            ++Y++   +P +   E
Sbjct: 881 HQQYMDGTPSPLQAFLE 897



>EAY08460.1 on XP_001611147  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1304

 Score = 25.8 bits (55), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 135  IDCFKCVDVCPAHVLTKGDHLQTFGYFGLKESGCLSCGNCLEVCP 179
            I+C  C   C  +   KG+H  T G  GL +  C S  +C  V P
Sbjct: 1111 IECRGCKGQCDPNKCRKGEHGSTTGSAGLCQ--CQSIVSCTGVLP 1153



>EAY08460.1 on XP_001351561  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3553

 Score = 25.8 bits (55), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 7/118 (5%)

Query: 26   FKSQETILELLSKNNINIPHKCQGTGD-CRLCKVLVNGVPRQSCEVIAKDGMIISTKDPN 84
            F++Q+ IL   +KNNINI  +     D   +C+ +          +  KD   I++   +
Sbjct: 892  FEAQKIILVYKNKNNINIRKRITDPNDQATVCRAIRYSFADLGDIIRGKDMWNINSDAKD 951

Query: 85   IKNNIENKVK-IYASFDPDVEKAYHLIKNPSMKQHHIDITTGSIQLNHETCIDCFKCV 141
            +++ +E   K I      +++K Y   +N      H+D+ +   + N        KC 
Sbjct: 952  LQDRLEKIFKTINEKLPNEIQKRYTNREN-----KHLDLRSDWWEANRHQVWRAMKCA 1004



>EAY08460.1 on XP_001348946  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3553

 Score = 25.8 bits (55), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 7/118 (5%)

Query: 26   FKSQETILELLSKNNINIPHKCQGTGD-CRLCKVLVNGVPRQSCEVIAKDGMIISTKDPN 84
            F++Q+ IL   +KNNINI  +     D   +C+ +          +  KD   I++   +
Sbjct: 892  FEAQKIILVYKNKNNINIRKRITDPNDQATVCRAIRYSFADLGDIIRGKDMWNINSDAKD 951

Query: 85   IKNNIENKVK-IYASFDPDVEKAYHLIKNPSMKQHHIDITTGSIQLNHETCIDCFKCV 141
            +++ +E   K I      +++K Y   +N      H+D+ +   + N        KC 
Sbjct: 952  LQDRLEKIFKTINEKLPNEIQKRYTNREN-----KHLDLRSDWWEANRHQVWRAMKCA 1004




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08465.1 Thioredoxin family protein [Trichomonas
vaginalis G3]
         (112 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_812771   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   2.0  
XP_001347692  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   5.3  

>EAY08465.1 on XP_812771   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 924

 Score = 24.3 bits (51), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/27 (37%), Positives = 17/27 (62%)

Query: 27  VVDFFATWCGPCQRLGQILPTIAEANK 53
           V D  ATW    +R+ ++ P+IAE ++
Sbjct: 465 VKDVLATWKKVDERVSKLCPSIAERDR 491



>EAY08465.1 on XP_001347692  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2994

 Score = 23.1 bits (48), Expect = 5.3,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 5/50 (10%)

Query: 62   VDQNGPVAEQFGVSSIPQINFVKPEGEDYKVLDTI-IGADVAKIKANIEK 110
            + +NG + E+F      Q+ +   +  D    + I IG D+ K+K+NI+K
Sbjct: 1343 IRKNGEIHEEFK----SQMFYTLADYRDILFGNNIGIGNDMGKVKSNIDK 1388




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08467.1 surface antigen BspA-like [Trichomonas
vaginalis G3]
         (1020 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAC72001   Hsp70  (Heat shock protein)  [Toxoplasma gondii]            27   4.6  
AAC72002  Hsp70  (Heat shock protein)  [Toxoplasma gondii]             27   4.6  
XP_001351318  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   9.6  

>EAY08467.1 on AAC72001   Hsp70  (Heat shock protein)  [Toxoplasma gondii]
          Length = 255

 Score = 26.9 bits (58), Expect = 4.6,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 7/92 (7%)

Query: 64  GEKLIICPAGLSVATIKKTIIVIGSNAFYGCSLLETII-----FEPGCRLEVMEEGTFGG 118
           GEK    P  +S   + K   +  + A+ G  + E +I     F    R    + GT  G
Sbjct: 110 GEKKTFHPEEVSAMVLGKMKEI--AEAYLGKEVKEAVITVPAYFNDSQRQATKDAGTIAG 167

Query: 119 CTALVRVDLPTSLQVVQRGSFEGCVNLQVITF 150
            + L  ++ PT+  +      +GC  + V+ F
Sbjct: 168 LSVLRIINEPTAAAIAYGLDKKGCGEMNVLIF 199



>EAY08467.1 on AAC72002  Hsp70  (Heat shock protein)  [Toxoplasma gondii]
          Length = 255

 Score = 26.9 bits (58), Expect = 4.6,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 7/92 (7%)

Query: 64  GEKLIICPAGLSVATIKKTIIVIGSNAFYGCSLLETII-----FEPGCRLEVMEEGTFGG 118
           GEK    P  +S   + K   +  + A+ G  + E +I     F    R    + GT  G
Sbjct: 110 GEKKTFHPEEVSAMVLGKMKEI--AEAYLGKEVKEAVITVPAYFNDSQRQATKDAGTIAG 167

Query: 119 CTALVRVDLPTSLQVVQRGSFEGCVNLQVITF 150
            + L  ++ PT+  +      +GC  + V+ F
Sbjct: 168 LSVLRIINEPTAAAIAYGLDKKGCGEMNVLIF 199



>EAY08467.1 on XP_001351318  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2169

 Score = 26.6 bits (57), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 3/56 (5%)

Query: 301 VEIIESSAFEGRSLASFHLNNLVKIEDSAFKNCASLSDFSVTDISSI--GNNAFEG 354
           V++  ++ FEG+S++ ++     K +DS    C  L+  S  DI  I  G + +EG
Sbjct: 144 VDVCYAAQFEGKSISGYYPRYQTKYKDSGSTICTVLA-RSFADIGDIIRGKDLYEG 198




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08468.1 hypothetical protein TVAG_145480 [Trichomonas
vaginalis G3]
         (473 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08470.1 hypothetical protein TVAG_145500 [Trichomonas
vaginalis G3]
         (181 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_845140  VSG  (Establishment)  [Trypanosoma brucei]                  27   0.96 
XP_820307   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   4.9  

>EAY08470.1 on XP_845140  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 533

 Score = 26.6 bits (57), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 10/24 (41%), Positives = 14/24 (58%)

Query: 94  GGLVLSHTENLIDGCPGGEDWYFT 117
           GG  ++  + LIDGCP  +D   T
Sbjct: 258 GGPQMTDVKALIDGCPAMQDTTVT 281



>EAY08470.1 on XP_820307   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 964

 Score = 24.3 bits (51), Expect = 4.9,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 32  RDNDRKFTFALFYPELKLYNIWQQSNNPLNEPKKWTTNNYYKV 74
           R+ ++K TF L Y + K + +   S NP ++ +   TN  + V
Sbjct: 624 REGNKK-TFELSYDKEKKWQVLCGSGNPEDQSRTLATNTTHHV 665




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08472.1 hypothetical protein TVAG_145520 [Trichomonas
vaginalis G3]
         (193 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08476.1 C2 domain containing protein [Trichomonas
vaginalis G3]
         (397 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_820135   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   0.69 
XP_001349032  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   1.6  
XP_802262   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.0  
XP_805897   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.2  
XP_802171   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.5  
XP_804171   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.8  
XP_803124   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   3.0  
XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]                 27   3.3  
AAM47178  gp90  (Others)  [Trypanosoma cruzi]                          24   6.2  
XP_001350936  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   8.5  
XP_804553   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   8.7  

>EAY08476.1 on XP_820135   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1519

 Score = 28.9 bits (63), Expect = 0.69,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 61/165 (36%), Gaps = 6/165 (3%)

Query: 218  SSLPYPSQAPGYPNPPQYPQIPNPQYMQPQPVQQFNPPYQQPYPPQYPPQYPNVPSNINS 277
            S+ P P++       P  P+   P+  +P+P +   P   +P P +     P  P+   S
Sbjct: 885  SAEPKPAEPKSAEPKPAEPKSAEPKSAEPKPAE---PKSAEPKPAEPKSAEPK-PAEPKS 940

Query: 278  LPPPKMNFGNQLPQLSPPMYPQPMQPYAPPQYNSQPHRPPPQQPNYYNPMAGAIPRVNPQ 337
              P      +  P+ + P   +P +P  P     +P  P   +P    P +       P+
Sbjct: 941  AEPKPAEPKSAEPKPAEPKSAEP-KPAEPKPAEPKPAEPKSAEPKPAEPKSAEPKPAEPK 999

Query: 338  FQSFPQPQYPPYNAPYPPQYPNQINSQPPPQMVHLPPMKPQKPNP 382
              + P+P  P    P P +  +       P+     P +P+   P
Sbjct: 1000 -SAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEP 1043




 Score = 28.9 bits (63), Expect = 0.70,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 61/165 (36%), Gaps = 11/165 (6%)

Query: 218 SSLPYPSQAPGYPNPPQYPQIPNPQYMQPQPVQQFNPPYQQPYPPQYPPQYPNVPSNINS 277
           S+ P P++       P  P+   P+  +P+P +Q +   +   P    P+    P+   S
Sbjct: 705 SAEPKPAEPKSAEPKPAEPKPAEPKSAEPKPAEQKSAEPKPAEPKSAEPK----PTEPKS 760

Query: 278 LPPPKMNFGNQLPQLSPPMYPQPMQPYAPPQYNSQPHRPPPQQPNYYNPMAGAIPRVNPQ 337
             P      +  P+ + P   +P +P  P     +P  P P +P        A P+    
Sbjct: 761 AEPKPAEPKSAEPKPAEPKPAEP-KPAEPKSAEPKPAEPKPAEPK------SAEPKPAEP 813

Query: 338 FQSFPQPQYPPYNAPYPPQYPNQINSQPPPQMVHLPPMKPQKPNP 382
             + P+P  P    P P +  +       P+     P +P+   P
Sbjct: 814 KSAEPKPAEPKSAEPKPAEPKSAEPKPTEPKSAEPKPAEPKPAEP 858



>EAY08476.1 on XP_001349032  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2267

 Score = 27.7 bits (60), Expect = 1.6,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 3/50 (6%)

Query: 225  QAPGYPNPPQYPQIPNPQYMQPQPVQQFNPPYQQPYPPQYPPQYPNVPSN 274
            + P  P PPQ   +P P     QP  +  P  Q   P ++P   P++ ++
Sbjct: 1724 ELPSAPEPPQDKALPKP---AAQPKDKKRPKRQPQNPWEHPIVIPSLATS 1770



>EAY08476.1 on XP_802262   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 443

 Score = 26.9 bits (58), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 10/18 (55%), Positives = 13/18 (72%)

Query: 177 NRPVNNVQHISSPHNPTI 194
           N  VNNV+H+S  HN T+
Sbjct: 380 NTRVNNVRHVSLSHNFTL 397



>EAY08476.1 on XP_805897   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 755

 Score = 26.9 bits (58), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 10/18 (55%), Positives = 13/18 (72%)

Query: 177 NRPVNNVQHISSPHNPTI 194
           N  VNNV+H+S  HN T+
Sbjct: 548 NTRVNNVRHVSLSHNFTL 565



>EAY08476.1 on XP_802171   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 274

 Score = 26.6 bits (57), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 10/18 (55%), Positives = 13/18 (72%)

Query: 177 NRPVNNVQHISSPHNPTI 194
           N  +NNV+HIS  HN T+
Sbjct: 72  NTRINNVRHISLSHNFTL 89



>EAY08476.1 on XP_804171   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 787

 Score = 26.6 bits (57), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 10/18 (55%), Positives = 13/18 (72%)

Query: 177 NRPVNNVQHISSPHNPTI 194
           N  +NNV+HIS  HN T+
Sbjct: 541 NTRINNVRHISLSHNFTL 558



>EAY08476.1 on XP_803124   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 620

 Score = 26.6 bits (57), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 10/18 (55%), Positives = 13/18 (72%)

Query: 177 NRPVNNVQHISSPHNPTI 194
           N  VNNV+H+S  HN T+
Sbjct: 367 NTRVNNVRHVSLSHNFTL 384



>EAY08476.1 on XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]
          Length = 2112

 Score = 26.6 bits (57), Expect = 3.3,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 4/58 (6%)

Query: 332 PRVNPQFQSFPQPQY--PPYNAPYPPQYPNQINSQPPPQMVHLPPMKPQ-KPNPNLYM 386
           P  NP+    P P+    P   P P + PN +  +P P+    P  KP+ + NP + M
Sbjct: 502 PEENPEPVEKPNPEENPNPVEKPTPEENPNPV-EKPTPEENPNPVEKPEPEKNPCINM 558




 Score = 26.6 bits (57), Expect = 3.5,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 12/62 (19%)

Query: 307 PQYNSQPHRPPPQQPNYYNPMAGAIPRVNPQFQSFPQPQYPPYNAPYPPQYPNQINSQPP 366
           P+ N +P   P  + N  NP+    P  NP           P   P P + PN +  +P 
Sbjct: 502 PEENPEPVEKPNPEENP-NPVEKPTPEENPN----------PVEKPTPEENPNPV-EKPE 549

Query: 367 PQ 368
           P+
Sbjct: 550 PE 551



>EAY08476.1 on AAM47178  gp90  (Others)  [Trypanosoma cruzi]
          Length = 70

 Score = 23.9 bits (50), Expect = 6.2,   Method: Composition-based stats.
 Identities = 10/18 (55%), Positives = 13/18 (72%)

Query: 177 NRPVNNVQHISSPHNPTI 194
           N  VNNV+H+S  HN T+
Sbjct: 3   NTRVNNVRHVSLSHNFTL 20



>EAY08476.1 on XP_001350936  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2163

 Score = 25.4 bits (54), Expect = 8.5,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 33/94 (35%), Gaps = 12/94 (12%)

Query: 167  NSNETNVPNDNRPVNNVQHISSPHNPTIPVQNNNNNNNFAQQTQYMQQMGPSSLPYPSQA 226
            + N T     N P +    I +   P     N  N       +QY+Q   P  +P   ++
Sbjct: 1852 SGNNTTASGKNTPSDTQNDIPTSDTPPPITDNEWNTLKDEFISQYLQSEQPKDVPNDYKS 1911

Query: 227  PGYPNPPQYPQIPNPQYMQPQPVQQFNPPYQQPY 260
               P   Q    PN  Y        FN P ++P+
Sbjct: 1912 GDIPLNTQ----PNTLY--------FNKPEEKPF 1933



>EAY08476.1 on XP_804553   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 827

 Score = 25.0 bits (53), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 3/44 (6%)

Query: 177 NRPVNNVQHISSPHNPTIPVQNNNN---NNNFAQQTQYMQQMGP 217
           N P  NV+H+S  HN TI          NNN    T  +   GP
Sbjct: 562 NTPDGNVRHVSLSHNFTIVASVTIEEAPNNNTPLLTALLGDAGP 605




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08481.1 glyoxalase family protein [Trichomonas
vaginalis G3]
         (120 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351435  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   0.52 
XP_818859   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   5.3  
XP_845633  VSG  (Establishment)  [Trypanosoma brucei]                  23   5.9  

>EAY08481.1 on XP_001351435  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2209

 Score = 26.2 bits (56), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)

Query: 42  YFVTLENGSRIELMNRAESVDRNDIGD--DIGFVSFAIKISDPERKK 86
           YF TLE   +IE +N   + D+ +  D  +I  +    KI D E++K
Sbjct: 733 YFTTLEGVLQIEFLNEGSAQDKQNSLDAKEIQHLKQIKKILDEEKQK 779



>EAY08481.1 on XP_818859   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 867

 Score = 23.5 bits (49), Expect = 5.3,   Method: Composition-based stats.
 Identities = 9/19 (47%), Positives = 14/19 (73%)

Query: 76  AIKISDPERKKQIAANLSN 94
           A+K++  E +KQ AA L+N
Sbjct: 714 AVKVTATEEEKQTAAQLTN 732



>EAY08481.1 on XP_845633  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 488

 Score = 23.1 bits (48), Expect = 5.9,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 15/28 (53%)

Query: 81  DPERKKQIAANLSNDGFNVENTGDNTIV 108
           D + K +   N+ NDG     TG+N+ V
Sbjct: 448 DGKCKLKEGVNMENDGKTTNTTGNNSFV 475




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08489.1 hypothetical protein TVAG_145690 [Trichomonas
vaginalis G3]
         (148 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_807592   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   8.1  

>EAY08489.1 on XP_807592   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 124

 Score = 22.7 bits (47), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 4/43 (9%)

Query: 66  PQRKISAAKSGNLTKIKTPRKGSNT--VPTAALTKLVNELRIN 106
           P   +S AK+G+  +IKT  K + T  VPTA  +  V E   N
Sbjct: 60  PAEAVSRAKTGD--EIKTEGKPATTQQVPTAPGSHAVGEAAGN 100




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08501.1 Kelch motif family protein [Trichomonas
vaginalis G3]
         (376 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_810932   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   5.0  
XP_001348275  RAP1  (Invasion)  [Plasmodium falciparum]                25   6.2  
XP_813586   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   9.9  

>EAY08501.1 on XP_810932   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 753

 Score = 25.8 bits (55), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 13/36 (36%), Positives = 20/36 (55%)

Query: 106 ENNKVTPRAGARAVLVGNFLWVFGGFYNKQYLGDLH 141
           ++NKV   AG+  V + N  W  GG   K ++GD+ 
Sbjct: 192 KDNKVFLLAGSSDVSIVNESWSHGGLKLKLFVGDVR 227



>EAY08501.1 on XP_001348275  RAP1  (Invasion)  [Plasmodium falciparum]
          Length = 782

 Score = 25.4 bits (54), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 17/29 (58%)

Query: 16  YDQYQPFFADDIPECYDIQKKTESDFGFN 44
           + +  PF  D++ E  ++ KKT S  GFN
Sbjct: 299 FSKLNPFKKDEVIEKTEVSKKTFSGIGFN 327



>EAY08501.1 on XP_813586   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1748

 Score = 25.0 bits (53), Expect = 9.9,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 9/78 (11%)

Query: 159 GPKNCSGHSMNYVNGKIVIFGGYNNGSIEQCCILDLRTMAWTSIETKLTKFSHASTVYNN 218
           GP+   G SMN V+  I +   Y  G +                 T +TK +  + V+  
Sbjct: 212 GPRRSGGFSMNSVSMSIRLPYPYQPGDM---------IGFLNDASTPITKMTDGTLVFPV 262

Query: 219 EVYLYGGSKTNAMIKINP 236
           +    GG+  + ++ +NP
Sbjct: 263 QFLTMGGNTASTIMYMNP 280




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08523.1 hypothetical protein TVAG_487490 [Trichomonas
vaginalis G3]
         (101 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08524.1 hypothetical protein TVAG_487500 [Trichomonas
vaginalis G3]
         (282 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001608668  variant erythrocyte surface antigen-1, alpha subun...    34   0.010
XP_001609101  variant erythrocyte surface antigen-1, alpha subun...    30   0.11 
XP_001609533  variant erythrocyte surface antigen-1, alpha subun...    30   0.17 
XP_965999  PfEMP1  (Establishment)  [Plasmodium falciparum]            29   0.39 
XP_001609163  variant erythrocyte surface antigen-1, alpha subun...    28   0.44 
XP_001610714  variant erythrocyte surface antigen-1, alpha subun...    28   1.0  
XP_821902   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   5.4  
XP_821910   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   6.2  
XP_001611147  variant erythrocyte surface antigen-1, alpha subun...    25   6.8  
XP_001610568  variant erythrocyte surface antigen-1, alpha subun...    25   7.3  
CAB72264  Toxofilin  (Establishment)  [Toxoplasma gondii]              24   7.5  
XP_001609618  variant erythrocyte surface antigen-1, alpha subun...    24   9.6  
XP_816233   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   9.6  

>EAY08524.1 on XP_001608668  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1337

 Score = 33.9 bits (76), Expect = 0.010,   Method: Composition-based stats.
 Identities = 51/193 (26%), Positives = 85/193 (44%), Gaps = 29/193 (15%)

Query: 111 QNKIQERINEIKDSILAEQKRETELKAKQAKLSSDLLKKQVELRGKQELLEKESTEPPD- 169
           + K + ++ E     L E K+E E KAK+A + S++     EL   ++ +EK  TE  + 
Sbjct: 709 EGKAESKVIEGVKQKLGEAKKELE-KAKEA-VESEVGMDGKELEEAKKAVEKAKTEGDNV 766

Query: 170 ----LQQLRKKLNNLQDQVNII-------SAQKEAFEQEYDDILEQLKAARDKRKIYDSL 218
               L++  K L N +D +N +        A         +  L+Q+ +A +K + Y S 
Sbjct: 767 RMAKLEKKMKALENAKDALNKLMTSGGSNGALNTLANGGGNGSLQQIGSANEKDRDYSSA 826

Query: 219 KEQSETA--NIDESRSA--ILESASKNLDLRRYKPLTEEAF-----SIDDLTELIQECQF 269
           K+Q   A   I+++  A  +L+ AS  L+  R      + F     +I DL E+      
Sbjct: 827 KDQISDAINGINQTLEALQLLKRASTTLNGHRDD--ISDVFMIYEKTITDLKEIYNS--- 881

Query: 270 LIKCAECELEEEK 282
             KC  CE    K
Sbjct: 882 -PKCPSCESHSTK 893



>EAY08524.1 on XP_001609101  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1359

 Score = 30.4 bits (67), Expect = 0.11,   Method: Composition-based stats.
 Identities = 34/140 (24%), Positives = 60/140 (42%), Gaps = 14/140 (10%)

Query: 9   ILKESQDIIASVKELDLTRKNLKEQLDIARNKVEEQKKIAELMSALMQRTDIPSEEVTS- 67
           +L   + ++  VKE     + +K+ L+ A+ K+EE KK  E + A     +     +T+ 
Sbjct: 722 VLGVVEKLVEGVKEKVKALEEIKKTLEAAKEKLEEAKKTQEALEAAKGELEGAKGALTTA 781

Query: 68  -KRILELQQEIAKAKAIQKEMKDKSNEMHKNIEKSLNMQQKAVQQ--NKIQERINEIKDS 124
            K       +I   K I     D        + K+L + + AVQQ     ++   E +D+
Sbjct: 782 KKAFPGSSSDIDPCKNIVSATID-------GLHKALQLLKDAVQQIMEATRKDTTEFQDA 834

Query: 125 ILAEQKRE---TELKAKQAK 141
           I +        TE++  QAK
Sbjct: 835 IFSATYTADVVTEVEKHQAK 854



>EAY08524.1 on XP_001609533  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1162

 Score = 30.0 bits (66), Expect = 0.17,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 72/141 (51%), Gaps = 11/141 (7%)

Query: 11  KESQDIIASVKELDLTRKNLKEQLDIARNKVEEQKKIAELMSALMQRTDIPSEEVTSKRI 70
           K+ +D++ ++ ++ +   N +E L+      ++++ I  + +AL ++     EE   K  
Sbjct: 634 KKIKDVLEAIGQVVVQLGNAQEALE-----GKDKEAINAVKTAL-EKAKGELEEAVKKVN 687

Query: 71  LELQQEIAKAKAIQKEMKDKSN----EMHKNIEKSLNMQQKAVQQNKIQERINEIKDSIL 126
             L  ++ +AK   + + +  +    E+ + +E + N +     +NKI E IN++++ + 
Sbjct: 688 GGLDVKLGEAKTALEALTNGGSGILGEVGEKLETATNGEYDP-GKNKISESINKVREVLK 746

Query: 127 AEQKRETELKAKQAKLSSDLL 147
             +K   ELK K+   +++LL
Sbjct: 747 ELEKVIKELKKKEVDDANELL 767



>EAY08524.1 on XP_965999  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 1325

 Score = 28.9 bits (63), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 27/112 (24%), Positives = 48/112 (42%), Gaps = 7/112 (6%)

Query: 140 AKLSSDLLKKQVELRGKQELLEKESTEPPDLQQLRKKLNNLQDQVNIISAQKEAFEQEYD 199
           AK   D +      RG  E+    +    D+  + +  +  +   N+ +  +E F++ Y+
Sbjct: 166 AKYEGDYIVNNHPNRGSSEVCIALARSFADIGDIVRGKDMFKSNDNVENGLREVFKKIYE 225

Query: 200 DILEQLKAARD-----KRKIYDSLKEQSETANIDESRSAILESASKNLDLRR 246
             L+  K AR+     K   Y  L+E   TAN D+   A+   A +N   R+
Sbjct: 226 GFLD--KGAREHYKEVKNGNYIKLREDWWTANRDQVWKAMTCVAPENAYFRK 275



>EAY08524.1 on XP_001609163  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1360

 Score = 28.5 bits (62), Expect = 0.44,   Method: Composition-based stats.
 Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 14/129 (10%)

Query: 20  VKELDLTRKNLKEQLDIARNKVEEQKKIAELMSALMQRTDIPSEEVTS--KRILELQQEI 77
           VKE     + +K+ L+ A+ K+EE KK  E + A     +     +T+  K       +I
Sbjct: 733 VKEKVKALEEIKKTLEAAKEKLEEAKKTQEALEAAKGELEGAKGALTTAKKAFPGSSSDI 792

Query: 78  AKAKAIQKEMKDKSNEMHKNIEKSLNMQQKAVQQ--NKIQERINEIKDSILAEQKRE--- 132
              K I     D        + K+L + + AVQQ     ++   E +D+I +        
Sbjct: 793 DPCKNIVSATID-------GLHKALQLLKDAVQQIMEATRKDTTEFQDAIFSATYTADVV 845

Query: 133 TELKAKQAK 141
           TE++  QAK
Sbjct: 846 TEVEKHQAK 854



>EAY08524.1 on XP_001610714  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1231

 Score = 27.7 bits (60), Expect = 1.0,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 43/91 (47%), Gaps = 3/91 (3%)

Query: 151 VELRGKQELLEKESTEPPDLQQLRKKLNNLQDQVNIISAQKEAFEQEYDDILEQLKAARD 210
           V+L   QE LE +  E   +Q ++++L   +  ++    + E  ++  + +         
Sbjct: 612 VQLGNAQEALEGK--EKKAIQGVKRELEKAKGALDTAKGKLEKAKKALEKLTTNGGGGGI 669

Query: 211 KRKIYDSL-KEQSETANIDESRSAILESASK 240
            + + D++ K QS+  N+D  ++AI E   K
Sbjct: 670 LKNVVDAIGKAQSDVTNVDPGKNAISEGVHK 700



>EAY08524.1 on XP_821902   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 854

 Score = 25.0 bits (53), Expect = 5.4,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 22/35 (62%)

Query: 113 KIQERINEIKDSILAEQKRETELKAKQAKLSSDLL 147
           K+ ER++++  ++LAE+   TE+     K++  L+
Sbjct: 495 KVDERVSQLCTTLLAEKVALTEIACTTGKITDGLV 529



>EAY08524.1 on XP_821910   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 853

 Score = 25.0 bits (53), Expect = 6.2,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 39/72 (54%), Gaps = 6/72 (8%)

Query: 82  AIQKEMKDKSNEM-HKNIEKSLNMQQKAVQQ-----NKIQERINEIKDSILAEQKRETEL 135
           A+ ++ K  ++E+ H  +   L  Q + V++      K+ ER++++  ++LAE+   TE+
Sbjct: 458 ALYEKKKKVNHELSHDMVTVRLTAQLERVKEVLTTWKKVDERVSQLCTTLLAEKVALTEI 517

Query: 136 KAKQAKLSSDLL 147
                K++  L+
Sbjct: 518 ACTTDKITDGLV 529



>EAY08524.1 on XP_001611147  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1304

 Score = 25.0 bits (53), Expect = 6.8,   Method: Composition-based stats.
 Identities = 52/228 (22%), Positives = 97/228 (42%), Gaps = 30/228 (13%)

Query: 61  PSEEVTSKRILELQQEIAKAK-----AIQKEMKDKSNEMHKNIEKSLNMQQKAVQQNKIQ 115
           P E    KR+ E+  ++ K       +  K++KD    + + + +  N Q+    + K  
Sbjct: 627 PMEHDRKKRVGEMGNKLNKLPLGSNGSDAKKIKDVLEAIGQVVVQLGNAQEAL--EGKKT 684

Query: 116 ERINEIKDSILAEQKRETELKAKQAKLSSDLLKKQVELRGKQELLEKESTEPPDLQQLRK 175
           E IN +K ++      +TEL+  + +L + + + +  L GK+    KE+ E   L     
Sbjct: 685 EAINAVKTAL---GTAKTELEKARTELDTAVKQVKSGLTGKELTKAKEALE--KLTGNGG 739

Query: 176 KLNNLQDQVNIISAQKEAFEQEYDDILEQLKAA-RDKRKIYDSLKEQSETANIDESRSAI 234
           K + L D V   S   +    EYD    ++ AA +  R   ++LKE+     + + +S +
Sbjct: 740 KGDLLGDVVGH-SGLGKVDSGEYDPGKNKISAAIKGVRDALEALKEE-----LKDDKSPL 793

Query: 235 LESASKNLDLRRYKPLTEEAFSIDDLTELIQECQFLIKCAECELEEEK 282
             +    +           A S    TE I++     KC +C+L  +K
Sbjct: 794 YGTLPGWV-----------ATSFHQATEQIKDICTSPKCHQCDLHSKK 830



>EAY08524.1 on XP_001610568  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1329

 Score = 24.6 bits (52), Expect = 7.3,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 17/144 (11%)

Query: 14  QDIIASVKELDLTRKNLKEQLDIARNKVEE--QKKIAELMSALMQRTDIPSEEVTSKRIL 71
           +D++  + E+ +   N +E L+  + +  E  +KK+    + L +        V  K  L
Sbjct: 673 KDVLEKIGEVVVQLGNAQEALEGKKTEAIEGVKKKLEGAKTELGKAKGELETAVNGKDGL 732

Query: 72  ELQQEIAKAKAIQKEMKDKSNEMHKNIEKSL---NMQQKAVQQNKIQERINEIKDSILAE 128
             +   AK K +    K   + + K +E +L   N       +NKI E IN ++D++ A 
Sbjct: 733 NGKLAEAKKKLVAL-TKGGGSGILKELEGALGAANSNDFDQGKNKISEAINGVRDALEAL 791

Query: 129 QKRETELKAKQAKLSSDLLKKQVE 152
           +K              DL+KK+V+
Sbjct: 792 EKG-----------VKDLIKKEVD 804



>EAY08524.1 on CAB72264  Toxofilin  (Establishment)  [Toxoplasma gondii]
          Length = 245

 Score = 24.3 bits (51), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 5/34 (14%)

Query: 220 EQSETANIDESRSAILESASKNLDLRRYKPLTEE 253
           EQ++ A +DE    IL  A++NLDLR+Y+ L  E
Sbjct: 105 EQAKAALLDE----ILR-ATQNLDLRKYENLNTE 133



>EAY08524.1 on XP_001609618  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1325

 Score = 24.3 bits (51), Expect = 9.6,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 2/49 (4%)

Query: 93  EMHKNIEKSLNMQQKAVQ--QNKIQERINEIKDSILAEQKRETELKAKQ 139
           E+   +EK+ N   K V   +NKI E IN++ + +   +K+  E+  K+
Sbjct: 765 EVDGALEKATNKDGKEVDPGKNKISEAINKVLEMLKEMEKQLKEVLEKE 813



>EAY08524.1 on XP_816233   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 851

 Score = 24.3 bits (51), Expect = 9.6,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 40/75 (53%), Gaps = 6/75 (8%)

Query: 79  KAKAIQKEMKDKSNEM-HKNIEKSLNMQQKAVQQ-----NKIQERINEIKDSILAEQKRE 132
           K  A+ ++ K  ++E+ H  +   L +Q + V++      K+ ER++++  ++LA +   
Sbjct: 453 KLIALYEKKKKVNHELSHDMVTVRLTVQLEKVKEVLTTWKKVDERVSQLCTTLLAGKVAL 512

Query: 133 TELKAKQAKLSSDLL 147
           TE+     K++  L+
Sbjct: 513 TEIACTTGKITDGLV 527




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08525.1 Nucleoside diphosphate kinase family protein
[Trichomonas vaginalis G3]
         (377 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08527.1 hypothetical protein TVAG_487530 [Trichomonas
vaginalis G3]
         (157 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08528.1 hypothetical protein TVAG_487540 [Trichomonas
vaginalis G3]
         (833 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_812607   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   3.9  
XP_813677   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   4.8  
XP_808550   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   6.1  

>EAY08528.1 on XP_812607   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 957

 Score = 27.3 bits (59), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)

Query: 48  LTNLNFSLVRIKAF-GNPIRSHDCSLLTLKKIKYQNPDQFSLNFGNELAF 96
             N NF+LV   +  G P      SL+ +K I  +NP  F L++  E  +
Sbjct: 585 FANYNFTLVATVSIDGEPQEGSPISLMGVKWIDDKNPVLFGLSYDREKKW 634



>EAY08528.1 on XP_813677   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 945

 Score = 27.3 bits (59), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 42  DSRILLLTNLNFSLVRIKAF-GNPIRSHDCSLLTLKKIKYQNPDQFSLNFGNELAF 96
           ++++    N NF+LV   +  G P      +L+  KK+   NP  F L++  E  +
Sbjct: 584 ENQLYHFANYNFTLVATVSIDGEPKEGSPITLMGAKKVDDNNPVLFGLSYDKEKKW 639



>EAY08528.1 on XP_808550   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 948

 Score = 26.9 bits (58), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 42  DSRILLLTNLNFSLVRIKAF-GNPIRSHDCSLLTLKKIKYQNPDQFSLNFGNELAF 96
           ++++    N NF+LV   +  G P      +L+  KK+   NP  F L++  E  +
Sbjct: 584 ENQLYHFANYNFTLVATVSIDGEPKEGSPITLMDAKKVDDNNPVLFGLSYDKEKKW 639




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08547.1 hypothetical protein TVAG_487740 [Trichomonas
vaginalis G3]
         (509 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001608668  variant erythrocyte surface antigen-1, alpha subun...    32   0.097
XP_001609040  variant erythrocyte surface antigen-1, alpha subun...    31   0.15 
XP_810808   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           31   0.19 
XP_001609540  variant erythrocyte surface antigen-1, alpha subun...    31   0.23 
XP_001610567  variant erythrocyte surface antigen-1, alpha subun...    30   0.34 
XP_001351564  PfEMP1  (Establishment)  [Plasmodium falciparum]         29   0.70 
XP_966151  TLP  (Invasion)  [Plasmodium falciparum]                    29   0.73 
XP_001609033  variant erythrocyte surface antigen-1, alpha subun...    29   0.82 
XP_809179   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   4.3  
XP_001349036  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   8.2  
XP_001609041  variant erythrocyte surface antigen-1, alpha subun...    25   8.7  

>EAY08547.1 on XP_001608668  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1337

 Score = 32.0 bits (71), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 19/165 (11%)

Query: 210 VLKIDIKSYEKLGKNYVRIKRKIK--KIIENLSDIINK---HTNKNADTHKEINPLIDNL 264
           V+   + S+  LG N +   RK +  K+ E+L  ++NK       N D   +   L D L
Sbjct: 632 VVSKGVISWMCLGCNPMEHDRKCRVDKVKEDLVGLVNKVKVGLEGNKDEEADGEELFDVL 691

Query: 265 KKLIDAIDGIGINSIIENNSTLHENIDK--NQKEIDGLKSQNKKKKKELNQMKEQQLNEL 322
           K          I S++       E ++     K I+G+K +  + KKEL + KE   +E+
Sbjct: 692 KA---------IGSVVVQLGNAQEALEGKAESKVIEGVKQKLGEAKKELEKAKEAVESEV 742

Query: 323 FETTKWMKEKHKNI---IIDLYNFRDQLINIKVSTIQTLAENLNK 364
               K ++E  K +     +  N R   +  K+  ++   + LNK
Sbjct: 743 GMDGKELEEAKKAVEKAKTEGDNVRMAKLEKKMKALENAKDALNK 787



>EAY08547.1 on XP_001609040  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1335

 Score = 31.2 bits (69), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 26/162 (16%)

Query: 255 KEINPLIDNLKKLIDAIDGIGINSIIENNSTLHENIDKNQKE-IDGLKSQNKKKKKELNQ 313
           KE +P++ NLK L++A     I  ++       E ++   KE I  +K +  + K  L +
Sbjct: 648 KESDPIVKNLKALLEA-----IGQVVVQLGNAQEALEGKDKEAIKKVKEKLTEAKGALGK 702

Query: 314 MKEQ--QLNELFETTKWMKEKHKNIIIDLYNFRDQLINIKVSTIQTLAENLNKSIEYLQD 371
            KE   Q+ +       +KE  K  + +L N     ++I V +  T           LQ 
Sbjct: 703 AKEGLDQVKDGLNGQAELKEA-KGKLGELTNGGKGALHILVDSGNTPGS--------LQQ 753

Query: 372 FNNSTTSFIKRFATIVFLYLINSERNKMQEAIDGLKYTLTYL 413
             +S   + K ++         S ++++ EAIDGL   L  L
Sbjct: 754 IVDSGQEWRKDYS---------SAKDRISEAIDGLHKVLEIL 786



>EAY08547.1 on XP_810808   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 735

 Score = 30.8 bits (68), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 25/112 (22%), Positives = 47/112 (41%), Gaps = 6/112 (5%)

Query: 88  SDFFHKYEANHKTYINEMNEIKFIQNIVSKNETLDRIFSRIILAMDNPPNHQIQRQYILN 147
           SD+ HK    ++TY     +++ +   VS   + D   S     + +P N      +  N
Sbjct: 200 SDYEHKQTVGNQTYSGFKTQLELVVGDVSDPTSSDPTESIKWGEIKSPLNESTIAAHKGN 259

Query: 148 VEGCLQLSSTFNELQNIYFNLPYIFKDGYRRYQKDGFYNLVIHQSKSKAKSW 199
           + G L    +   +++     P + K G     K  FY+++I+ SK    +W
Sbjct: 260 LTGLLAAGGSGVLMEDGMLVFPVMAKSG-----KGDFYSMIIY-SKDNGSTW 305



>EAY08547.1 on XP_001609540  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1349

 Score = 30.8 bits (68), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 2/58 (3%)

Query: 215 IKSYEKLGKNYVRIKRKIKKIIENLSDIINKHTNKNADTHKE-INPLIDNLKKLIDAI 271
           +++ EK G     +K K+K  +    D++ K    + D  K  ++  ID L+K +DA+
Sbjct: 757 VEALEKAG-GLKDVKEKVKTALTAAKDVVGKQNGTDVDPCKNLVSAAIDGLQKALDAL 813



>EAY08547.1 on XP_001610567  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1315

 Score = 30.0 bits (66), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 4/68 (5%)

Query: 29  NGPSNIHNLFQLLSKNFLNIFDQSQEECTQAISQITQTLANLKQE---NSKVLIRDIPIQ 85
           NG   +  + Q L K   + FDQ + E + AI  +   L  LK+E   +   L   +P  
Sbjct: 755 NGGGKLGEVVQKLGKATSDDFDQGKNELSNAIKGVRDALEALKEELKDDKSPLYGKLP-D 813

Query: 86  KISDFFHK 93
            + + FHK
Sbjct: 814 WVRELFHK 821



>EAY08547.1 on XP_001351564  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2207

 Score = 29.3 bits (64), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 6/96 (6%)

Query: 177  RRYQKDGFYNLVIHQSKSKAKSWQSILK---PIYQLVLKIDIKSYEKLGKNYVRIKRKIK 233
            R+Y  DG     +H+  +      S        Y+  +KI    YEK  K Y + K+  +
Sbjct: 1256 RQYSGDGEDCDKVHEDPTTLPDLGSSCPKSCSSYRKWIKIKKDEYEKQQKAYEQQKKNCE 1315

Query: 234  K---IIENLSDIINKHTNKNADTHKEINPLIDNLKK 266
            K    +EN SDI ++   +N   +  I+  +D LKK
Sbjct: 1316 KESEGVENKSDICDQKFLQNLKNYGSIDSFLDRLKK 1351



>EAY08547.1 on XP_966151  TLP  (Invasion)  [Plasmodium falciparum]
          Length = 1371

 Score = 29.3 bits (64), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 8/78 (10%)

Query: 415 SNTDELNNVIYCAMNASTLILSAETARTIKSYA-----SALFFFFILSECPDDANIYYDL 469
           SNT+EL   + C +  S   +SA T   IK Y      +    +   S C    N+ Y  
Sbjct: 229 SNTNEL---LKCVLKNSFYNISALTYEIIKYYDDISINAICHGWSEWSPCSVTCNMGYHF 285

Query: 470 TEYESLAFMRDGGTGLSK 487
           ++ +SL ++++  +GL K
Sbjct: 286 SKRDSLGYIKNSKSGLYK 303



>EAY08547.1 on XP_001609033  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1270

 Score = 28.9 bits (63), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 16/111 (14%)

Query: 210 VLKIDIKSYEKLGKNYVRIKRKIKKIIENLSDIINKHTNKNADTHKEINPLIDNLKKLID 269
           VL  D+ S+  LG N +   RK +  +E + D ++    + AD+      +   +K L++
Sbjct: 585 VLGKDVVSWMCLGCNPMEHDRKGR--VEKVKDGLDG-VKEGADS------VAAKVKALLE 635

Query: 270 AIDGIGINSIIENNSTLHENIDKNQ--KEIDGLKSQNKKKKKELNQMKEQQ 318
           AI       ++       E ++K    K I+G+K   +K KKEL   K ++
Sbjct: 636 AI-----GEVVVQLGNAQEALEKKAENKAIEGVKGALEKAKKELEGAKGEE 681



>EAY08547.1 on XP_809179   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 853

 Score = 26.6 bits (57), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 13/37 (35%), Positives = 19/37 (51%)

Query: 283 NSTLHENIDKNQKEIDGLKSQNKKKKKELNQMKEQQL 319
           N+T+H N D   K  DG+K Q    +  + +  E QL
Sbjct: 547 NATVHNNDDGATKASDGVKFQGAWAEWPVGRQGENQL 583



>EAY08547.1 on XP_001349036  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2192

 Score = 25.8 bits (55), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)

Query: 270  AIDGIGINSIIENNSTLHENIDKNQKEIDG-LKSQNKKKKKELNQMKEQ 317
            A D  G N+II N S   +++DK QK+ID  LK    K  +E N  +E+
Sbjct: 1094 ADDKNGGNNIILNASGNKQDMDKIQKKIDKILKQSASKPGQEPNSKREE 1142



>EAY08547.1 on XP_001609041  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1318

 Score = 25.4 bits (54), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 39/193 (20%), Positives = 86/193 (44%), Gaps = 46/193 (23%)

Query: 228 IKRKIKKIIENLSDIINKHTN---------KNA------DTHKEINPLIDNLKKLIDAID 272
           I  K+K ++E + +++ +  N         K A      +  K    L++ +K++ DA++
Sbjct: 683 IAEKVKALLEKIGEVVVQLGNAQEALEGKDKGAIEGVKRELEKAKEELVEAVKQVKDAVE 742

Query: 273 GIGI------------NSIIENNSTLHENIDKNQ--KEIDG----LKSQNKKKKKELNQM 314
             G+            N  ++  ++   +  KN+    IDG    L++  K+ +K+L ++
Sbjct: 743 NCGLEEAKNKLEELTGNGGLDKANSGEYDPGKNKISAAIDGVCKALEALKKEMEKQLKEV 802

Query: 315 KEQQLNELFETTKW-MKEKHKNIIIDLYNFRDQLINI----KVSTIQTLAENLNK--SIE 367
            E++ +++ + TKW ++EK        Y    +LI+I    K S  ++ +    K  +  
Sbjct: 803 LEKEQSDMDDITKWFIREK------TFYKAVKELISICNSPKCSACESHSTKCGKPPTPS 856

Query: 368 YLQDFNNSTTSFI 380
           + Q     TT+ +
Sbjct: 857 FCQTCLQPTTTGV 869




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08576.1 Ser/Thr protein phosphatase, putative
[Trichomonas vaginalis G3]
         (377 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001349737  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   1.3  
XP_966160  PfEMP1  (Establishment)  [Plasmodium falciparum]            25   8.4  

>EAY08576.1 on XP_001349737  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2199

 Score = 27.7 bits (60), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 36/76 (47%), Gaps = 3/76 (3%)

Query: 255  HQCVLNGH-ETLHDGKIITVFSSSAYNDVKSNKSAILIMNANDTQEIVTFDTIRTVTRDK 313
            H C   G+ +   DGK  T  +++   ++K+N   + ++ ++D++    F    +  +DK
Sbjct: 1424 HNCSSGGNTQGKCDGK--TTIAATEIENIKTNTKEVTMLVSDDSKSATEFKDGLSECKDK 1481

Query: 314  AVFYPVGDSAPRCTKL 329
             +F  +      C K+
Sbjct: 1482 GIFKGIRKDEWECGKV 1497



>EAY08576.1 on XP_966160  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2394

 Score = 25.0 bits (53), Expect = 8.4,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 7/72 (9%)

Query: 186 LNDVKYISKPVLDSEIEKPESLIADILWSDPSCDDTEFSDSFRGHGKIFGKKVITKFLET 245
           L D K  ++   D + ++ E      L  DP  DD E +D+ + +    GKK+      T
Sbjct: 693 LEDAKKCTETHNDEKCKEQEESGGRSLNPDPESDDEEETDNVKENPCAVGKKL------T 746

Query: 246 TKMKRIVRA-HQ 256
             +K+I R  HQ
Sbjct: 747 KTVKQIARQMHQ 758




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08584.1 hypothetical protein TVAG_191070 [Trichomonas
vaginalis G3]
         (460 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001612314  variant erythrocyte surface antigen-1, alpha subun...    30   0.36 
XP_829333  VSG  (Establishment)  [Trypanosoma brucei]                  28   1.6  
XP_001608665  variant erythrocyte surface antigen-1, alpha subun...    27   2.9  
AAY40294  Pyroglutamyl peptidase I  (Others)  [Trypanosoma brucei]     26   4.4  
XP_001350082  Rh2b  (Adhesin)  [Plasmodium falciparum]                 26   5.8  
XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 26   7.1  
XP_001351877  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   9.4  

>EAY08584.1 on XP_001612314  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1308

 Score = 30.0 bits (66), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 16/71 (22%), Positives = 34/71 (47%)

Query: 49  TKPSRQEISVISKTVDILKEDNTSFKESISKELHSFKMDFTSQFSANKESTKKELTDAIF 108
           T    +E++  ++ +  L    T   +S+  E H ++ D     + NK +TK E+T+ + 
Sbjct: 31  TGKDGKELNKETECICGLAAAVTDLLQSVQLEYHGYQGDVKDSATTNKGATKDEVTNHLN 90

Query: 109 SINSVVRAQNA 119
            + S+V+    
Sbjct: 91  GLFSLVQGLGG 101



>EAY08584.1 on XP_829333  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 420

 Score = 27.7 bits (60), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 51/125 (40%), Gaps = 20/125 (16%)

Query: 335 IEIP-RLKLNKISSRLDELSDKVATIDTFDEKIDSMQKNFESIIHSAMREVQSAIVSPGV 393
           + IP  +KL K ++R+D+L +   T+    E ++ +++             Q AI     
Sbjct: 270 LSIPWYVKLAKAATRMDKLMEAEKTLREILENVEKLERK------------QVAI----- 312

Query: 394 SPRFPRDFTAAKTSVTPHANQAHKVMYGEFQNQRTPSRPQTEMKSERSPGSNRKPSLRPL 453
            P  P D   A  SV+    + +    G   N R     + E+  E+SPGS + P     
Sbjct: 313 -PPKPADEGNAVPSVSKDVVENNNENSG-VSNNREKRESKGELNEEKSPGSEKSPEEVDC 370

Query: 454 DDLNP 458
           D   P
Sbjct: 371 DGCKP 375



>EAY08584.1 on XP_001608665  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1326

 Score = 26.9 bits (58), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 12/49 (24%), Positives = 24/49 (48%)

Query: 71  TSFKESISKELHSFKMDFTSQFSANKESTKKELTDAIFSINSVVRAQNA 119
           T   +S+  E H ++ D  +   ANK   K+ +T+ +  + S+V+    
Sbjct: 54  TDLLQSVELEYHGYQGDVKNGADANKGPPKERVTECLNGLFSLVQGLGG 102



>EAY08584.1 on AAY40294  Pyroglutamyl peptidase I  (Others)  [Trypanosoma brucei]
          Length = 222

 Score = 25.8 bits (55), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 10/73 (13%)

Query: 167 MEVNSFEEFEGWSLTKAIHLATEGDRSDIKMIQAQINTLSNRIENAEAVARKICRNPNDP 226
           +EV +F E EG  +   + L+T  D + +K    ++ T +  IE   A+     RN +D 
Sbjct: 97  LEVRAFNELEGNPIDDELPLSTCKDSAFVK--GCKLETTTALIEELNAIE----RNGSDH 150

Query: 227 L--PQWIKSPKYD 237
              P+WI S  YD
Sbjct: 151 HEKPRWIIS--YD 161



>EAY08584.1 on XP_001350082  Rh2b  (Adhesin)  [Plasmodium falciparum]
          Length = 1115

 Score = 25.8 bits (55), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 25/103 (24%), Positives = 50/103 (48%), Gaps = 18/103 (17%)

Query: 66  LKEDNTSFKESISKELHSFKMDFTSQFSANKESTKKELTDAIFSINSVVR--AQNALIEE 123
           LKE   + KE+ SK L + K + T  ++ N  + K ++ +   S+N++ +  + N  ++E
Sbjct: 324 LKEKANNLKENFSKLLQNIKRNETELYNIN--NIKDDIMNTGKSVNNIKQKFSSNLPLKE 381

Query: 124 KVFELTKPTFEFNEMRAAVSDVKTSHAQVMNELKRLQLSFAHV 166
           K+F++ +     N               +MNE KR+  + A+ 
Sbjct: 382 KLFQMEEMLLNIN--------------NIMNETKRISNTDAYT 410



>EAY08584.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 25.8 bits (55), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 25/102 (24%), Positives = 50/102 (49%), Gaps = 18/102 (17%)

Query: 66   LKEDNTSFKESISKELHSFKMDFTSQFSANKESTKKELTDAIFSINSVVR--AQNALIEE 123
            LKE   + KE+ SK L + K + T  ++ N  + K ++ +   S+N++ +  + N  ++E
Sbjct: 2463 LKEKANNLKENFSKLLQNIKRNETELYNIN--NIKDDIMNTGKSVNNIKQKFSSNLPLKE 2520

Query: 124  KVFELTKPTFEFNEMRAAVSDVKTSHAQVMNELKRLQLSFAH 165
            K+F++ +     N               +MNE KR+  + A+
Sbjct: 2521 KLFQMEEMLLNIN--------------NIMNETKRISNTAAY 2548



>EAY08584.1 on XP_001351877  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2270

 Score = 25.4 bits (54), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 12/86 (13%)

Query: 341  KLNKISSRLDELSDKVATIDTFDEKIDSMQKNFESIIHSAMREVQSAIVSPGVSPR---- 396
            +LN   + LD   D     +  +E +D +++ +E+  HS   ++ S I S  +S      
Sbjct: 2091 QLNLFHTWLDRQRDMCQQWNNKEEVLDKLKEKWENETHSG--DINSGIPSGKLSDTPSDN 2148

Query: 397  ------FPRDFTAAKTSVTPHANQAH 416
                   P D  + K S  P  N  H
Sbjct: 2149 NIHSDIHPSDIPSGKQSDIPSDNNIH 2174




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08585.1 hypothetical protein TVAG_191080 [Trichomonas
vaginalis G3]
         (899 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CAA85377  ROP2A  (Establishment)  [Toxoplasma gondii]                  27   4.1  

>EAY08585.1 on CAA85377  ROP2A  (Establishment)  [Toxoplasma gondii]
          Length = 255

 Score = 26.9 bits (58), Expect = 4.1,   Method: Composition-based stats.
 Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 11/71 (15%)

Query: 805 YFNGNDGHDEIVEISKNYMPEMAPNNRNNFFEKPRELQMTSRPNDLVMRVTTLMKPSTAF 864
           YF G D  D ++E   N +PE +  N N         ++ S  N LV   T L +   +F
Sbjct: 191 YFRGTDPGDVVIEELFNRIPETSVWNENE--------RVLSNANHLVS--TALWRNEQSF 240

Query: 865 SRASSRLPARP 875
            R  S L  RP
Sbjct: 241 -RVESELGERP 250




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08586.1 hypothetical protein TVAG_191090 [Trichomonas
vaginalis G3]
         (115 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_821693   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   0.53 
XP_001611442  variant erythrocyte surface antigen-1, alpha subun...    23   4.2  
XP_803417  VSG  (Establishment)  [Trypanosoma brucei]                  23   6.6  

>EAY08586.1 on XP_821693   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 834

 Score = 26.2 bits (56), Expect = 0.53,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 19/41 (46%)

Query: 1   MFNTLITSQPETPQVRSDSDDDSENEHPISALLGPTPTESP 41
           ++N   +   E   V  D+D  S     I ALL   P+E+P
Sbjct: 725 LYNRPFSFSGENADVEEDADSPSVEGEQIVALLATKPSEAP 765



>EAY08586.1 on XP_001611442  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1350

 Score = 23.5 bits (49), Expect = 4.2,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 21/37 (56%)

Query: 42   FKNKKSTKEDDTKTYITSLKKAFEDADKHQREEISFE 78
            F  + + K      ++ SLKK  E+A+K ++++ + E
Sbjct: 1230 FDIEDTKKAKQCHEFLDSLKKVIENAEKDKQDQATKE 1266



>EAY08586.1 on XP_803417  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 540

 Score = 22.7 bits (47), Expect = 6.6,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 15/88 (17%)

Query: 38  TESPFKNKKSTKEDDTKTYITSLKKAFEDADKHQREEISFEEWK-----------NSDLR 86
           T+   +NKKS   DD  +   ++K A+ D D  ++   +  + +           ++ L 
Sbjct: 316 TKIHLQNKKSDDPDDEDSRERAIKTAYGDDDGMRKVLYAHPDGQPIPKAALGTDADTTLG 375

Query: 87  QFIHNGRLTEKEFELYFYKIDANANELI 114
           Q    G L      LYFY  D N  +L+
Sbjct: 376 QITDVGEL----MRLYFYYSDLNKQKLL 399




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08589.1 hypothetical protein TVAG_191120 [Trichomonas
vaginalis G3]
         (286 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_818892   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.24 
XP_818893   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.25 
XP_814219   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.74 
XP_819530   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.9  
XP_827755  VSG  (Establishment)  [Trypanosoma brucei]                  25   6.3  
XP_816303   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   9.0  
XP_804800   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   9.6  

>EAY08589.1 on XP_818892   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 956

 Score = 29.6 bits (65), Expect = 0.24,   Method: Composition-based stats.
 Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 90  TISSLLLLS--GTKDSTIAAISLQKGIEDTTAVAAALLNFITLEK 132
           T SSLL  S  G KD  IA    +KG+E+T++  A++L    LEK
Sbjct: 433 TASSLLYKSVEGKKDELIALYEKKKGVEETSSGMASVLLTAQLEK 477



>EAY08589.1 on XP_818893   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 956

 Score = 29.6 bits (65), Expect = 0.25,   Method: Composition-based stats.
 Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 90  TISSLLLLS--GTKDSTIAAISLQKGIEDTTAVAAALLNFITLEK 132
           T SSLL  S  G KD  IA    +KG+E+T++  A++L    LEK
Sbjct: 433 TASSLLYKSVEGKKDELIALYEKKKGVEETSSGMASVLLTAQLEK 477



>EAY08589.1 on XP_814219   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 958

 Score = 28.1 bits (61), Expect = 0.74,   Method: Composition-based stats.
 Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 4/47 (8%)

Query: 90  TISSLLLLSG----TKDSTIAAISLQKGIEDTTAVAAALLNFITLEK 132
           T SSLL  SG     KD  IA    +KG+E+T++  A++L    LEK
Sbjct: 433 TASSLLYKSGGNGGKKDELIALYEKKKGVEETSSGMASVLLTEQLEK 479



>EAY08589.1 on XP_819530   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 904

 Score = 26.6 bits (57), Expect = 1.9,   Method: Composition-based stats.
 Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 23/120 (19%)

Query: 86  GQMATISSLLLLSGTKDSTIAAISLQKGIEDTTAVAAALLNFITLEKSEFELKHKFQTNA 145
           G  A  SSLL  SG K+  + A+  +KG +  TA     L  +++  +E +LK   +  A
Sbjct: 425 GDDAAASSLLYKSGDKNDELIALYEKKGGDKDTAS----LGMVSVLLTE-QLKRVKEVLA 479

Query: 146 GSLKVDGIKEALSAAVLLKSIFQSTNGRVFIRYPISKDVFTDEDATKLVDTLKIMIALQS 205
              KVDGI   L            TN        +++DV + EDA ++    K ++   S
Sbjct: 480 TWKKVDGIVSKL-----------CTNS-------VAQDVTSPEDACRIAMPTKGLVGFLS 521



>EAY08589.1 on XP_827755  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 510

 Score = 25.0 bits (53), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 10/32 (31%), Positives = 19/32 (59%)

Query: 202 ALQSVENKNEHLSVEESILLINKGYGDKASSF 233
           A  ++++  ++   +E I  I KGYG+ A +F
Sbjct: 348 AFHNIDDPTDNSKAKELIKWIEKGYGETADNF 379



>EAY08589.1 on XP_816303   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 955

 Score = 24.6 bits (52), Expect = 9.0,   Method: Composition-based stats.
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 3/46 (6%)

Query: 90  TISSLLLLSGT---KDSTIAAISLQKGIEDTTAVAAALLNFITLEK 132
           T SSLL  S     KD  IA    +KG+E+T++   ++L    LEK
Sbjct: 434 TASSLLYKSAESKDKDELIALYEKKKGVEETSSGMVSVLLTEQLEK 479



>EAY08589.1 on XP_804800   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 940

 Score = 24.3 bits (51), Expect = 9.6,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 5/48 (10%)

Query: 90  TISSLLLLSGT-----KDSTIAAISLQKGIEDTTAVAAALLNFITLEK 132
           T SSLL  SG      K+  IA    +KG+E+T++  A++L    L++
Sbjct: 431 TASSLLYKSGKSGENKKEELIALYEKKKGVEETSSGMASVLLTAQLQR 478




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08590.1 hypothetical protein TVAG_191130 [Trichomonas
vaginalis G3]
         (378 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08591.1 Starch binding domain containing protein
[Trichomonas vaginalis G3]
         (904 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_818295   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   1.6  
XP_951757  VSG  (Establishment)  [Trypanosoma brucei]                  26   8.8  

>EAY08591.1 on XP_818295   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 922

 Score = 28.9 bits (63), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 65/183 (35%), Gaps = 36/183 (19%)

Query: 570 QQWWKRRLEIHERYFQSLRVKDADKIVQVGEVP----PQMAINAMHLSTDKSLSEQELKD 625
           +QW  R L      F           V + EVP    P M +  M  +T   LS   ++ 
Sbjct: 536 KQWPTRPLHFANYGFT------LATTVSIHEVPKGITPLMGLKRMRTTTLLGLSYDNME- 588

Query: 626 MKLWDIKRYVTP-YLRSKLLPPIFGDDTNYIEKKYFN------VRGRGFRD-KLLSFKMQ 677
              W ++    P YL    L     D T ++  K  N      V G+   D  LL F  +
Sbjct: 589 ---WSVEHGSYPRYLTKWEL-----DKTYHVVLKMHNGVGSVYVDGKSLLDLALLRFSDE 640

Query: 678 SLDEVEEKYRSKMQALLSDVVMTESLGRFFFVN---------TLGNSWKDLPQPQRRIIQ 728
            LDE+   Y      LLS   +  ++   F  N          L  +   +P P+R  + 
Sbjct: 641 ELDEISHFYFGAYDELLSSGKIHATVANVFLYNRPLNDTEIGALNANKVTIPPPEREPVP 700

Query: 729 RIT 731
            +T
Sbjct: 701 ALT 703



>EAY08591.1 on XP_951757  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 476

 Score = 26.2 bits (56), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 6/56 (10%)

Query: 186 GDEHTVIIPESHNPSIIEIV------DPYRWTDSIIETISRSPFTKAFNPREASSK 235
           GD+    IP++   +I  IV      DP  + ++I + +  +P TK+ + R + +K
Sbjct: 300 GDDTATEIPQAERNNIKNIVESSYGKDPTTYEETIWKGVKATPLTKSNSGRPSDTK 355




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08595.1 hypothetical protein TVAG_191180 [Trichomonas
vaginalis G3]
         (409 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_807911   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   7.4  

>EAY08595.1 on XP_807911   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 281

 Score = 25.0 bits (53), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 18/29 (62%)

Query: 183 QYNELGDFGKNARKSSFGRAARTTNYQTI 211
           Q++ L D  ++  KSSF  A  T++ QT+
Sbjct: 123 QHSTLSDASEDVEKSSFHPAPPTSDEQTV 151




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08600.1 hypothetical protein TVAG_191230 [Trichomonas
vaginalis G3]
         (1840 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_805354   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           35   0.034
XP_001348176  PfEMP1  (Establishment)  [Plasmodium falciparum]         33   0.14 
XP_001608795  variant erythrocyte surface antigen-1, alpha subun...    28   5.6  
XP_001349513  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   9.1  

>EAY08600.1 on XP_805354   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 403

 Score = 35.0 bits (79), Expect = 0.034,   Method: Composition-based stats.
 Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 7/83 (8%)

Query: 1623 DEYNIESVKNSLEIEKSSNIQMVQWKATNCTRIVELNDQIKSIETSLGNSNVGQLLKKLS 1682
            DE+ +  VK  +  E+ SN Q + WK TN      L +Q+ S+   +G    G  LK   
Sbjct: 200  DEWGLLLVKGEVSGEEESNKQ-IDWKDTNAVPKTPLGEQLSSLTRLIGGGGSGVKLK--- 255

Query: 1683 SAQDELSRLEEENNTLEDEIEEE 1705
               D       E    +DEIEE+
Sbjct: 256  ---DGTLVFPLEGTKKDDEIEED 275



>EAY08600.1 on XP_001348176  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3119

 Score = 33.5 bits (75), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 17/189 (8%)

Query: 1374 LVLDSKKFEEELSKFSESLQTFISASIHDEVYTWKQYNLSAMLQLKKIKESIESSFIIQH 1433
            L++DS K+E EL+   ++  T  +   +     + ++      + K +K   E+    ++
Sbjct: 582  LLIDSIKWENELNNCIDNTSTHCNKECNKNCECFDKWVKKKEDEWKNVKNVFEN----KN 637

Query: 1434 LTSENYKSEVSISISSLYFDKICELNKLDQKRREILHTMDETN-NEIASSIRKEFDSLVQ 1492
             TS NY ++++      +F+ + +LNK            DET  N++  S+R + DS  +
Sbjct: 638  GTSHNYYNKLNGLFKGFFFEVMDKLNK------------DETKWNKLIESLRTKIDSSKE 685

Query: 1493 DISKEVEHEKSKFVMRKRKTYQCILNILQKPHSLDNDYHKSTSPTAQENENILSNVKSKN 1552
            +I      +  K ++   K    I        + +   ++ T+P A+ +   L+ VK   
Sbjct: 686  NIGTGNTQDTIKVLLDHLKETATICKDNNTNEACETSRNRKTNPCAKPHGKKLATVKQIA 745

Query: 1553 EYLIKKVKI 1561
            +Y  +K  I
Sbjct: 746  QYYKRKAYI 754



>EAY08600.1 on XP_001608795  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1323

 Score = 28.1 bits (61), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 35/165 (21%), Positives = 69/165 (41%), Gaps = 18/165 (10%)

Query: 1627 IESVKNSLEIEKSSNIQMVQWKATNCTRIVELNDQIKSIETSLGNSNVGQLLKKLSSAQD 1686
            + + + +LE +K   I+ V+ K         L +  + +ET++ N N G +  KL  A++
Sbjct: 672  LGNAQEALEGKKKEAIEGVKGK---------LTEAREGLETAV-NGN-GGMDGKLGEAKN 720

Query: 1687 ELSRLEEENNTLEDEIEEEIRKPIR-------QSQRVRTAISRTRIERSRILGSVSQLSQ 1739
            +L  L    + +  ++E+ +               ++  AI   R     +   V  L Q
Sbjct: 721  KLGELTNGGSGILKDVEDALGTAQNDVTNVDPGKNKISAAIKGVRNVLDELRKGVEGLKQ 780

Query: 1740 LDYNDITQKRSPTYEEYVQENEQLKAQNAQLRRNIDKLTEQISQL 1784
               N+I    S  +   V++NE  KA   ++      L + I++L
Sbjct: 781  EKENEIMCGLSEVFGVPVEDNELEKALQQEVSHEYTALLQAINKL 825



>EAY08600.1 on XP_001349513  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2858

 Score = 27.7 bits (60), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 23/120 (19%)

Query: 1730 ILGSVSQLSQLDYNDITQKRSPTYEEYVQ-----ENEQLKAQNAQLRRNIDKLTEQISQL 1784
            I  S S+  ++D NDI    SP Y+  ++           + +A + +  D   ++ +QL
Sbjct: 2529 ITSSESEYEEMDINDIYVPDSPKYKTLIEVVLEPSKRDTPSSDAPMNKFTD---DEWNQL 2585

Query: 1785 PQDM-------QYRALPPNFLSTSNVPSSRKPNFV-------RPVTSKTSTRSITSKSEI 1830
             QD        + + LP N +S  N P + +PN +       +P  +    R + S  EI
Sbjct: 2586 KQDFISGILENEQKDLPKNNIS-GNTPMNTQPNTLYFNKPEEKPFITSIHDRDLYSGEEI 2644




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08607.1 hypothetical protein TVAG_239670 [Trichomonas
vaginalis G3]
         (686 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_803927   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   6.3  
XP_650534  HgI  (Adhesin)  [Entamoeba histolytica]                     26   8.6  

>EAY08607.1 on XP_803927   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 412

 Score = 26.2 bits (56), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 6/31 (19%)

Query: 116 GNAQFPVKGTVDGKALQLKLMMTPYEFTVTD 146
           G   FPV+GT DGKA+ L +      +T TD
Sbjct: 272 GTLVFPVEGTKDGKAVSLII------YTATD 296



>EAY08607.1 on XP_650534  HgI  (Adhesin)  [Entamoeba histolytica]
          Length = 1207

 Score = 26.2 bits (56), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 7/71 (9%)

Query: 371 FYEFNFDSAVQRLKRLPEMKD-----FEAPDKKDAMPFTELVKTII-HNTEWAERPLCAA 424
           FY FN DS+++   +L E+ +     F++     +    +L  TI+ +NTE  +R  C  
Sbjct: 330 FYVFNLDSSIEEEYQLEELVNKGEHYFKSSVSSLSTSLPQLYNTIMANNTELCDRKTC-K 388

Query: 425 GILLQGRKVSI 435
           G    G + + 
Sbjct: 389 GFCDGGARCTC 399




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08608.1 hypothetical protein TVAG_239680 [Trichomonas
vaginalis G3]
         (357 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_652394  Igl2  (Adhesin)  [Entamoeba histolytica]                    25   5.9  
XP_001351079  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   9.4  

>EAY08608.1 on XP_652394  Igl2  (Adhesin)  [Entamoeba histolytica]
          Length = 1105

 Score = 25.4 bits (54), Expect = 5.9,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 24/41 (58%)

Query: 83  DQAKRESAQRFNTYVLQSSEIRRAHKKIQHQVAKIQDSLDE 123
           D + ++  + F  Y LQS +  + ++KI+  + +++ S ++
Sbjct: 162 DSSSKQCDKCFGMYSLQSGQCTKKNEKIEKCILQVESSCNQ 202



>EAY08608.1 on XP_001351079  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2203

 Score = 25.0 bits (53), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 5/45 (11%)

Query: 312  ALIEKIKEATARFSAASQINTT-----TFSFGDTTIDSSINTLSS 351
             LIE + E + + + AS  NTT     T + G+ T  S  NT +S
Sbjct: 1859 TLIEVVLEPSGKNTTASGNNTTASGNNTTASGNNTTASGKNTTAS 1903




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08613.1 hypothetical protein TVAG_239730 [Trichomonas
vaginalis G3]
         (150 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001350082  Rh2b  (Adhesin)  [Plasmodium falciparum]                 23   6.3  

>EAY08613.1 on XP_001350082  Rh2b  (Adhesin)  [Plasmodium falciparum]
          Length = 1115

 Score = 23.5 bits (49), Expect = 6.3,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 20/39 (51%)

Query: 8  LKVHVDESVNDHKLVTQQFNDINVQWKTLSKTVDRSINE 46
          +K  V  S N    + +  NDI+ + KTL   +D  +NE
Sbjct: 3  IKTIVQNSYNSFSDINKNINDIDKEMKTLIPMLDELLNE 41




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08614.1 CAMK family protein kinase [Trichomonas
vaginalis G3]
         (396 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    60   4e-11

>EAY08614.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 60.5 bits (145), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 97/211 (45%), Gaps = 17/211 (8%)

Query: 7   IPSSIGPYTFKQTLGHGAFSVVKLAIHNVTKQQFACKIIKKTALSKDNKAEERFELETRI 66
           +P S   Y   + +G G FS V   ++ VTK        K          +++ + E +I
Sbjct: 51  VPDS---YEIVRKIGRGKFSEVFEGLNTVTKD-------KCVIKILKPVKKKKIKREIKI 100

Query: 67  LQQMRH-PNIAQLFDIMAD--GTFFYVVLEICPNGELFKFIIQNKFLPENEAKMYMKPIV 123
           LQ +R  PNI +L DI+ D       ++ E   N + FK +     L   + K Y+  ++
Sbjct: 101 LQNLRGGPNIIKLLDIVKDPQSRTPSLIFEHVNNTD-FKTLYPT--LTIQDIKYYIYQLL 157

Query: 124 EALKYIHDLKVVHRDLKPENILLD-DKNRPKITDFGFSRYVLHDQLLKTTCGSPCYASPA 182
           +A+ Y H   ++HRD+KP N+++D +K   ++ D+G + +   +Q       +  Y  P 
Sbjct: 158 KAMNYCHSQGIMHRDIKPHNVMIDHEKKILRLIDWGLAEFYHPEQEYSVRVATRYYKGPE 217

Query: 183 CIAGKEYDGFKNDIWGLGVIFFATVTGQLPW 213
            +    Y  +  DIW +G +    +  + P+
Sbjct: 218 LLVDMRYYDYSLDIWSIGCMLAGIIFKKEPF 248




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08620.1 Microtubule-associated protein, putative
[Trichomonas vaginalis G3]
         (113 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 28   0.13 
XP_001350082  Rh2b  (Adhesin)  [Plasmodium falciparum]                 27   0.19 
XP_001349036  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   2.7  
AAM47175  Rh4  (Adhesin)  [Plasmodium falciparum]                      23   6.1  
AAM47192  Rh4  (Adhesin)  [Plasmodium falciparum]                      23   6.2  
AAM47174  Rh4  (Adhesin)  [Plasmodium falciparum]                      23   6.2  

>EAY08620.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 28.1 bits (61), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 18/98 (18%)

Query: 13   MTMLNKYPDHIPVIVERDPHCTTLPDIKNK------KFFVTKTLSVGNFVYCVRNRLDIN 66
            +++ NKY DHI V    D + +   D+ NK      +  +  T  + N +  +   ++IN
Sbjct: 2232 ISIFNKYDDHIKV----DNYISNNIDVVNKHNSLLSEHVINATNIIENIMTSI---VEIN 2284

Query: 67   EKDAIFLFVDNTLPNPSDNLGAIYEKHKSEDQMLHCTY 104
            E   +     N+L    D L  +YE  K E  +++  Y
Sbjct: 2285 EDTEM-----NSLEETQDKLLELYENFKKEKNIINNNY 2317



>EAY08620.1 on XP_001350082  Rh2b  (Adhesin)  [Plasmodium falciparum]
          Length = 1115

 Score = 27.3 bits (59), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 18/98 (18%)

Query: 13  MTMLNKYPDHIPVIVERDPHCTTLPDIKNK------KFFVTKTLSVGNFVYCVRNRLDIN 66
           +++ NKY DHI V    D + +   D+ NK      +  +  T  + N +  +   ++IN
Sbjct: 93  ISIFNKYDDHIKV----DNYISNNIDVVNKHNSLLSEHVINATNIIENIMTSI---VEIN 145

Query: 67  EKDAIFLFVDNTLPNPSDNLGAIYEKHKSEDQMLHCTY 104
           E   +     N+L    D L  +YE  K E  +++  Y
Sbjct: 146 EDTEM-----NSLEETQDKLLELYENFKKEKNIINNNY 178



>EAY08620.1 on XP_001349036  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2192

 Score = 23.9 bits (50), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 10/21 (47%), Positives = 12/21 (57%)

Query: 60   RNRLDINEKDAIFLFVDNTLP 80
            R++LD NE D  F   DN  P
Sbjct: 1388 RDKLDFNEPDETFKDADNCKP 1408



>EAY08620.1 on AAM47175  Rh4  (Adhesin)  [Plasmodium falciparum]
          Length = 1711

 Score = 23.1 bits (48), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)

Query: 77  NTLPNPSDNLGAI-YEKHKSEDQMLHCT 103
           N L +  +NL  I ++K+KS D ML CT
Sbjct: 433 NQLQHKINNLMIISFDKNKSSDLMLQCT 460



>EAY08620.1 on AAM47192  Rh4  (Adhesin)  [Plasmodium falciparum]
          Length = 1716

 Score = 23.1 bits (48), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)

Query: 77  NTLPNPSDNLGAI-YEKHKSEDQMLHCT 103
           N L +  +NL  I ++K+KS D ML CT
Sbjct: 435 NQLQHKINNLMIISFDKNKSSDLMLQCT 462



>EAY08620.1 on AAM47174  Rh4  (Adhesin)  [Plasmodium falciparum]
          Length = 1711

 Score = 23.1 bits (48), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)

Query: 77  NTLPNPSDNLGAI-YEKHKSEDQMLHCT 103
           N L +  +NL  I ++K+KS D ML CT
Sbjct: 435 NQLQHKINNLMIISFDKNKSSDLMLQCT 462




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08625.1 hypothetical protein TVAG_239850 [Trichomonas
vaginalis G3]
         (185 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001347692  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   3.0  

>EAY08625.1 on XP_001347692  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2994

 Score = 25.0 bits (53), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 4/34 (11%)

Query: 143  SLLNKHRELQKENIDYII----KQMDTVRRFYIQ 172
            S LNKH E  K NID I     +  DT+R+ + +
Sbjct: 991  SKLNKHTEAVKTNIDRIFPPTERTNDTIRKEFWE 1024




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08626.1 hypothetical protein TVAG_239860 [Trichomonas
vaginalis G3]
         (455 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351319  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   3.5  

>EAY08626.1 on XP_001351319  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2646

 Score = 26.6 bits (57), Expect = 3.5,   Method: Composition-based stats.
 Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 2/79 (2%)

Query: 255  QAEIERAEYERIMKLAEQQMDEEDRRNAAEKKKRQERQAAIDALIEKEAKNLAEIKAAQN 314
            +A +E A  E      + +MD++  +   EKKK+Q     + AL         E K  Q 
Sbjct: 1405 KAFVESAAVETFFLWHKYKMDKQ--KELDEKKKQQRESGLVGALDGNSGNVDDEDKDPQK 1462

Query: 315  KFEEKQIGDEFEKDRKRTL 333
            K E+  I +EF++    TL
Sbjct: 1463 KLEKGDIPEEFKRQMFYTL 1481




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08638.1 hypothetical protein TVAG_239980 [Trichomonas
vaginalis G3]
         (484 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_814038   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   5.1  
XP_001351515  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   6.2  

>EAY08638.1 on XP_814038   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 790

 Score = 26.2 bits (56), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)

Query: 344 LILHGANVNNSYSPLS---YAAGKNNTEIAELLISHGALVNAIDEFETHLLHEATRNNCT 400
           +I++  N  +++S LS    +AG +N  I E     G+L+  +D      ++E+     T
Sbjct: 300 MIIYSTNNGSTWS-LSEGVSSAGCHNPRITEW--GTGSLLMVVDCVNGQRVYESRDMGTT 356

Query: 401 ETAKTLLENGAHVNAKDVFGMTPLHIAA 428
            T  T    G  VNA+ VF     H+ A
Sbjct: 357 WTEATGTLPGVWVNARSVFWDVSPHLDA 384



>EAY08638.1 on XP_001351515  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2181

 Score = 26.2 bits (56), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 13/23 (56%), Positives = 15/23 (65%)

Query: 23  LYRLNTKEQDEIEDIYKGIKKQF 45
           LYR N KE+D +ED  K I KQ 
Sbjct: 199 LYRGNNKEKDRLEDNLKKIFKQL 221




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08641.1 von Willebrand factor type A domain
containing protein [Trichomonas vaginalis G3]
         (665 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAB63303  MIC2  (Invasion)  [Toxoplasma gondii]                        33   0.033
AAW78177  TRAP  (Invasion)  [Plasmodium falciparum]                    33   0.065
AAW78166  TRAP  (Invasion)  [Plasmodium falciparum]                    32   0.077
AAW78147  TRAP  (Invasion)  [Plasmodium falciparum]                    32   0.089
AAW78159  TRAP  (Invasion)  [Plasmodium falciparum]                    32   0.094
AAW78149  TRAP  (Invasion)  [Plasmodium falciparum]                    32   0.14 
AAW78153  TRAP  (Invasion)  [Plasmodium falciparum]                    32   0.14 
AAW78169  TRAP  (Invasion)  [Plasmodium falciparum]                    31   0.18 
AAW78130  TRAP  (Invasion)  [Plasmodium falciparum]                    31   0.19 
AAW78131  TRAP  (Invasion)  [Plasmodium falciparum]                    31   0.19 
AAW78154  TRAP  (Invasion)  [Plasmodium falciparum]                    31   0.20 
AAW78158  TRAP  (Invasion)  [Plasmodium falciparum]                    31   0.21 
AAW78146  TRAP  (Invasion)  [Plasmodium falciparum]                    31   0.21 
AAW78163  TRAP  (Invasion)  [Plasmodium falciparum]                    31   0.21 
AAW78144  TRAP  (Invasion)  [Plasmodium falciparum]                    31   0.22 
AAW78138  TRAP  (Invasion)  [Plasmodium falciparum]                    31   0.23 
AAW78150  TRAP  (Invasion)  [Plasmodium falciparum]                    31   0.23 
AAW78152  TRAP  (Invasion)  [Plasmodium falciparum]                    31   0.23 
AAW78141  TRAP  (Invasion)  [Plasmodium falciparum]                    30   0.30 
AAW78135  TRAP  (Invasion)  [Plasmodium falciparum]                    30   0.33 
AAW78165  TRAP  (Invasion)  [Plasmodium falciparum]                    30   0.35 
AAA29778  TRAP  (Invasion)  [Plasmodium falciparum]                    30   0.35 
AAW78161  TRAP  (Invasion)  [Plasmodium falciparum]                    30   0.35 
AAW78176  TRAP  (Invasion)  [Plasmodium falciparum]                    30   0.37 
AAW78132  TRAP  (Invasion)  [Plasmodium falciparum]                    30   0.39 
AAW78160  TRAP  (Invasion)  [Plasmodium falciparum]                    30   0.41 
AAW78164  TRAP  (Invasion)  [Plasmodium falciparum]                    30   0.43 
AAA29773  TRAP  (Invasion)  [Plasmodium falciparum]                    30   0.44 
AAQ11894  TRAP  (Invasion)  [Plasmodium falciparum]                    30   0.45 
AAQ11891  TRAP  (Invasion)  [Plasmodium falciparum]                    30   0.50 
AAW78139  TRAP  (Invasion)  [Plasmodium falciparum]                    30   0.52 
AAW78151  TRAP  (Invasion)  [Plasmodium falciparum]                    30   0.54 
AAW78137  TRAP  (Invasion)  [Plasmodium falciparum]                    30   0.56 
AAW78167  TRAP  (Invasion)  [Plasmodium falciparum]                    30   0.57 
AAA29772  TRAP  (Invasion)  [Plasmodium falciparum]                    30   0.58 
AAW78133  TRAP  (Invasion)  [Plasmodium falciparum]                    30   0.61 
AAW78162  TRAP  (Invasion)  [Plasmodium falciparum]                    30   0.61 
AAW78174  TRAP  (Invasion)  [Plasmodium falciparum]                    30   0.63 
AAW78172  TRAP  (Invasion)  [Plasmodium falciparum]                    30   0.63 
AAW78156  TRAP  (Invasion)  [Plasmodium falciparum]                    30   0.68 
AAW78148  TRAP  (Invasion)  [Plasmodium falciparum]                    29   0.69 
AAW78136  TRAP  (Invasion)  [Plasmodium falciparum]                    29   0.73 
AAW78171  TRAP  (Invasion)  [Plasmodium falciparum]                    29   0.75 
AAW78157  TRAP  (Invasion)  [Plasmodium falciparum]                    29   0.77 
AAW78173  TRAP  (Invasion)  [Plasmodium falciparum]                    29   0.83 
AAW78134  TRAP  (Invasion)  [Plasmodium falciparum]                    29   0.84 
AAW78168  TRAP  (Invasion)  [Plasmodium falciparum]                    29   0.84 
AAW78175  TRAP  (Invasion)  [Plasmodium falciparum]                    29   0.85 
AAA29777  TRAP  (Invasion)  [Plasmodium falciparum]                    29   1.2  
AAB68611  AP51-3  (Adhesin)  [Trichomonas vaginalis]                   28   1.2  
AAA29770  TRAP  (Invasion)  [Plasmodium falciparum]                    28   1.2  
AAA29774  TRAP  (Invasion)  [Plasmodium falciparum]                    28   1.4  
AAA29776  TRAP  (Invasion)  [Plasmodium falciparum]                    28   1.5  
XP_001704890  CWP1  (Others)  [Giardia duodenalis]                     28   1.5  
AAQ11895  TRAP  (Invasion)  [Plasmodium falciparum]                    28   1.6  
AAQ11892  TRAP  (Invasion)  [Plasmodium falciparum]                    28   1.7  
AAB68610  AP51-2  (Adhesin)  [Trichomonas vaginalis]                   28   2.0  
AAA29775  TRAP  (Invasion)  [Plasmodium falciparum]                    28   2.5  
AAA29771  TRAP  (Invasion)  [Plasmodium falciparum]                    28   2.6  
AAB68609  AP51-1  (Adhesin)  [Trichomonas vaginalis]                   27   2.7  
XP_001351517  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   3.2  
XP_001349437  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   8.8  

>EAY08641.1 on AAB63303  MIC2  (Invasion)  [Toxoplasma gondii]
          Length = 255

 Score = 33.1 bits (74), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 59/138 (42%), Gaps = 12/138 (8%)

Query: 240 DYFFVIDCSGSMEGKRIQKAVKCLHLMLQSLPM---KCRFSIFCFGTEFKQIMPIAEYNN 296
           D  F+ID SGS+  +  +   + LH  L  LP+   +   ++  + T+      +   N 
Sbjct: 76  DICFLIDSSGSIGIQNFRLVKQFLHTFLMVLPIGPEEVNNAVVTYSTDVHLQWDLQSPNA 135

Query: 297 ENVLLAMNMIKNIQADMYGTNIYDPLKCIFSL---------EGMTKKIFLLTDGEVNNAE 347
            +  LA + +  +      TN  D LK    +         E + K +  +TDGE ++  
Sbjct: 136 VDKQLAAHAVLEMPYKKGSTNTSDGLKACKQILFTGSRPGREHVPKLVIGMTDGESDSDF 195

Query: 348 EILNLAEENKKFGNIYTV 365
             +  A+E ++ G I TV
Sbjct: 196 RTVRAAKEIRELGGIVTV 213



>EAY08641.1 on AAW78177  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 32.7 bits (73), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 68/170 (40%), Gaps = 17/170 (10%)

Query: 240 DYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPI---A 292
           D + ++DCSGS+     +  AV     ++Q L +           F    ++I+ +   A
Sbjct: 48  DLYLLMDCSGSIRRHNWVNHAVPLAMKLIQQLNLNDNAIHLYASVFSNNAREIIRLHSDA 107

Query: 293 EYNNENVLLAMNMIKNIQADMYGTNIYDPLKCI-------FSLEGMTKKIFLLTDGEVNN 345
             N E  L+ +  + N       TN+ D L  +        + E   + + +LTDG  N+
Sbjct: 108 SKNKEKALIIIKSLLNTNLPFGRTNLSDALLQVRKHLNDRINRENANQLVVILTDGIPNS 167

Query: 346 AEEILNLAEENKKFG-NIYTVGIGSGADQCLIRDL--AEITDGKWTYVLD 392
            ++ L  + +    G  I   GIG G +    R L     +DGK     D
Sbjct: 168 IQDSLKESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 217



>EAY08641.1 on AAW78166  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 545

 Score = 32.3 bits (72), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 68/170 (40%), Gaps = 17/170 (10%)

Query: 240 DYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPI---A 292
           D + ++DCSGS+     +  AV     ++Q L +           F    ++I+ +   A
Sbjct: 48  DLYLLMDCSGSIRRNNWVNHAVPLAMKLIQQLNLNDNAIHLYANVFSNNAREIIRLHSDA 107

Query: 293 EYNNENVLLAMNMIKNIQADMYGTNIYDPLKCI-------FSLEGMTKKIFLLTDGEVNN 345
             N E  L+ +  + N       TN+ D L  +        + E   + + +LTDG  N+
Sbjct: 108 SKNKEKALIIIKSLLNTNLPFGRTNLSDALLQVRKHLNDRINRENANQLVVILTDGIPNS 167

Query: 346 AEEILNLAEENKKFG-NIYTVGIGSGADQCLIRDL--AEITDGKWTYVLD 392
            ++ L  + +    G  I   GIG G +    R L     +DGK     D
Sbjct: 168 IQDSLKESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 217



>EAY08641.1 on AAW78147  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 32.3 bits (72), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 78/174 (44%), Gaps = 17/174 (9%)

Query: 238 KADYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPIAE 293
           + D + ++DCSGS+     ++ AV     ++Q L +        +  F    K+I+ +  
Sbjct: 46  QVDLYLLMDCSGSIRRHNWVKHAVPLAMKLIQQLNLNDNAIHLYVNVFSNNAKEIIRLHS 105

Query: 294 YNNENVLLAMNMIKNIQAD--MYG-TNIYDPLKCI-------FSLEGMTKKIFLLTDGEV 343
             ++N   A+ +IK++ +    YG TN+ D L  +        + E   + + +LTDG  
Sbjct: 106 DASKNKEKALIIIKSLLSTNLPYGKTNLTDALLQVRKHLNDRINRENANQLVVILTDGIP 165

Query: 344 NNAEEILNLAEENKKFG-NIYTVGIGSGADQCLIRDL--AEITDGKWTYVLDNE 394
           ++ ++ L  + +    G  I   GIG G +    R L     +DGK     D+E
Sbjct: 166 DSIQDSLKESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYADSE 219



>EAY08641.1 on AAW78159  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 32.3 bits (72), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 68/170 (40%), Gaps = 17/170 (10%)

Query: 240 DYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPI---A 292
           D + ++DCSGS+     +  AV     ++Q L +           F    ++I+ +   A
Sbjct: 48  DLYLLMDCSGSIRRHNWVNHAVPLAMKLIQQLNLNDNAIHLYANVFSNNAREIIRLHSDA 107

Query: 293 EYNNENVLLAMNMIKNIQADMYGTNIYDPLKCI-------FSLEGMTKKIFLLTDGEVNN 345
             N E  L+ +  + N       TN+ D L  +        + E   + + +LTDG  N+
Sbjct: 108 SKNKEKALIIIKSLLNTNLPFGRTNLSDALLQVRKHLNDRINRENANQLVVILTDGIPNS 167

Query: 346 AEEILNLAEENKKFG-NIYTVGIGSGADQCLIRDL--AEITDGKWTYVLD 392
            ++ L  + +    G  I   GIG G +    R L     +DGK     D
Sbjct: 168 IQDSLKESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 217



>EAY08641.1 on AAW78149  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 542

 Score = 31.6 bits (70), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 77/172 (44%), Gaps = 17/172 (9%)

Query: 238 KADYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPIAE 293
           + D + ++DCSGS+     +  AV     ++Q L +        +  F    ++I+ +  
Sbjct: 46  QVDLYLLMDCSGSIRRHNWVNHAVPLAMKLIQQLNLNDNAIHLYVNVFSNNAREIIRLHS 105

Query: 294 YNNENVLLAMNMIKNIQAD--MYG-TNIYDPLKCI-------FSLEGMTKKIFLLTDGEV 343
             ++N   A+++IK++ +    YG TN+ D L  +        + E   + + +LTDG  
Sbjct: 106 DASKNKEKALSIIKSLLSTNLPYGRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIP 165

Query: 344 NNAEEILNLAEE-NKKFGNIYTVGIGSGADQCLIRDL--AEITDGKWTYVLD 392
           ++ ++ L  + + N +   I   GIG G +    R L     +DGK     D
Sbjct: 166 DSIQDSLKESRKLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 217



>EAY08641.1 on AAW78153  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 545

 Score = 31.6 bits (70), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 76/170 (44%), Gaps = 17/170 (10%)

Query: 240 DYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPIAEYN 295
           D + ++DCSGS+     +  AV     ++Q L +        +  F    ++I+ +    
Sbjct: 48  DLYLLMDCSGSIRRNNWVNHAVPLAMKLIQQLNLNDNAIHLYVNVFSNNAREIIRLHSDA 107

Query: 296 NENVLLAMNMIKNIQAD--MYG-TNIYDPLKCI-------FSLEGMTKKIFLLTDGEVNN 345
           ++N   A+++IK++ +    YG TN+ D L  +        + E   + + +LTDG  ++
Sbjct: 108 SKNKEKALSIIKSLLSTNLPYGRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPDS 167

Query: 346 AEEILNLAEE-NKKFGNIYTVGIGSGADQCLIRDL--AEITDGKWTYVLD 392
            ++ L  + + N +   I   GIG G +    R L     +DGK     D
Sbjct: 168 IQDSLKESRKLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 217



>EAY08641.1 on AAW78169  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 551

 Score = 31.2 bits (69), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 76/170 (44%), Gaps = 17/170 (10%)

Query: 240 DYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPIAEYN 295
           D + ++DCSGS+     +  AV     ++Q L +        +  F    ++I+ +    
Sbjct: 48  DLYLLMDCSGSIRRHNWVNHAVPLAMKLIQQLNLNDNAIHLYVNVFSNNAREIIRLHSDA 107

Query: 296 NENVLLAMNMIKNIQAD--MYG-TNIYDPLKCI-------FSLEGMTKKIFLLTDGEVNN 345
           ++N   A+++IK++ +    YG TN+ D L  +        + E   + + +LTDG  ++
Sbjct: 108 SKNKEKALSIIKSLLSTNLPYGRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPDS 167

Query: 346 AEEILNLAEE-NKKFGNIYTVGIGSGADQCLIRDL--AEITDGKWTYVLD 392
            ++ L  + + N +   I   GIG G +    R L     +DGK     D
Sbjct: 168 IQDSLKESRKLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 217



>EAY08641.1 on AAW78130  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 31.2 bits (69), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 39/172 (22%), Positives = 71/172 (41%), Gaps = 17/172 (9%)

Query: 238 KADYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPI-- 291
           + D + ++DCSGS+     ++ AV     ++Q L +        +  F    K+I+ +  
Sbjct: 46  QVDLYLLMDCSGSIRRHNWVKHAVPLAMKLIQQLNLNDNAIHLYVNVFSNNAKEIIRLHS 105

Query: 292 -AEYNNENVLLAMNMIKNIQADMYGTNIYDPLKCI-------FSLEGMTKKIFLLTDGEV 343
            A  N E  L+ +  + +       TN+ D L  +        + E   + + +LTDG  
Sbjct: 106 DASKNKEKALIIIKSLLSTNLPYGKTNLTDALLQVRKHLNDRINRENANQLVVILTDGIP 165

Query: 344 NNAEEILNLAEENKKFG-NIYTVGIGSGADQCLIRDL--AEITDGKWTYVLD 392
           ++ ++ L  + +    G  I   GIG G +    R L     +DGK     D
Sbjct: 166 DSIQDSLKESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 217



>EAY08641.1 on AAW78131  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 557

 Score = 31.2 bits (69), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 70/170 (41%), Gaps = 17/170 (10%)

Query: 240 DYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPI---A 292
           D + ++DCSGS+     +  AV     ++Q L +        +  F    K+I+ +   A
Sbjct: 48  DVYLLMDCSGSIRRHNWVNHAVPLAMKLIQQLNLNDNAIHLYVNVFSNNAKEIIRLHSDA 107

Query: 293 EYNNENVLLAMNMIKNIQADMYGTNIYDPLKCI-------FSLEGMTKKIFLLTDGEVNN 345
             N E  L+ +  + +       TN+ D L  +        + E   + + +LTDG  ++
Sbjct: 108 SKNKEKALIIIKSLLSTNLPFGRTNLSDALLQVRKHLNDRINRENANQLVVILTDGIPDS 167

Query: 346 AEEILNLAEENKKFG-NIYTVGIGSGADQCLIRDL--AEITDGKWTYVLD 392
            ++ L  + + K  G  I   GIG G +    R L     +DGK     D
Sbjct: 168 IQDSLKESRKLKDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 217



>EAY08641.1 on AAW78154  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 542

 Score = 31.2 bits (69), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 76/172 (44%), Gaps = 17/172 (9%)

Query: 238 KADYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPIAE 293
           + D + ++DCSGS+     ++ AV     ++Q L +        +  F    K+I+ +  
Sbjct: 46  QVDLYLLMDCSGSIRRHNWVKHAVPLAMKLIQQLNLNDNAIHLYVNVFSNNAKEIIRLHS 105

Query: 294 YNNENVLLAMNMIKNIQAD--MYG-TNIYDPLKCI-------FSLEGMTKKIFLLTDGEV 343
             ++N   A+ +IK++ +    YG TN+ D L  +        + E   + + +LTDG  
Sbjct: 106 DASKNKEKALIIIKSLLSTNLPYGKTNLTDALLQVRKHLNDRINRENANQLVVILTDGIP 165

Query: 344 NNAEEILNLAEENKKFG-NIYTVGIGSGADQCLIRDL--AEITDGKWTYVLD 392
           ++ ++ L  + +    G  I   GIG G +    R L     +DGK     D
Sbjct: 166 DSIQDSLKESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 217



>EAY08641.1 on AAW78158  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 542

 Score = 31.2 bits (69), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 39/172 (22%), Positives = 71/172 (41%), Gaps = 17/172 (9%)

Query: 238 KADYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPI-- 291
           + D + ++DCSGS+     ++ AV     ++Q L +        +  F    K+I+ +  
Sbjct: 46  QVDLYLLMDCSGSIRRHNWVKHAVPLAMKLIQQLNLNDNAIHLYVNVFSNNAKEIIRLHS 105

Query: 292 -AEYNNENVLLAMNMIKNIQADMYGTNIYDPLKCI-------FSLEGMTKKIFLLTDGEV 343
            A  N E  L+ +  + +       TN+ D L  +        + E   + + +LTDG  
Sbjct: 106 DASKNKEKALIIIKSLLSTNLPYGKTNLTDALLQVRKHLNDRINRENANQLVVILTDGIP 165

Query: 344 NNAEEILNLAEENKKFG-NIYTVGIGSGADQCLIRDL--AEITDGKWTYVLD 392
           ++ ++ L  + +    G  I   GIG G +    R L     +DGK     D
Sbjct: 166 DSIQDSLKESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 217



>EAY08641.1 on AAW78146  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 31.2 bits (69), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 76/172 (44%), Gaps = 17/172 (9%)

Query: 238 KADYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPIAE 293
           + D + ++DCSGS+     ++ AV     ++Q L +        +  F    K+I+ +  
Sbjct: 46  QVDLYLLMDCSGSIRRHNWVKHAVPLAMKLIQQLNLNDNAIHLYVNVFSNNAKEIIRLHS 105

Query: 294 YNNENVLLAMNMIKNIQAD--MYG-TNIYDPLKCI-------FSLEGMTKKIFLLTDGEV 343
             ++N   A+ +IK++ +    YG TN+ D L  +        + E   + + +LTDG  
Sbjct: 106 DASKNKEKALIIIKSLLSTNLPYGKTNLTDALLQVRKHLNDRINRENANQLVVILTDGIP 165

Query: 344 NNAEEILNLAEENKKFG-NIYTVGIGSGADQCLIRDL--AEITDGKWTYVLD 392
           ++ ++ L  + +    G  I   GIG G +    R L     +DGK     D
Sbjct: 166 DSIQDSLKESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 217



>EAY08641.1 on AAW78163  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 565

 Score = 31.2 bits (69), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 78/173 (45%), Gaps = 23/173 (13%)

Query: 240 DYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPIAEYN 295
           D + ++DCSGS+     +  AV     ++Q L +        +  F    ++I+ +    
Sbjct: 48  DLYLLMDCSGSIRRHNWVNHAVPLAMKLIQQLNLNDNAIHLYVNVFSNNAREIIRLHSDA 107

Query: 296 NENVLLAMNMIKNIQAD--MYG-TNIYDPLKCI-------FSLEGMTKKIFLLTDGEVNN 345
           ++N   A+++IK++ +    +G TN+ D L  +        + E   + + +LTDG  N+
Sbjct: 108 SKNKEKALSIIKSLLSTNLPFGRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPNS 167

Query: 346 AEEILNLAEENKKFGN----IYTVGIGSGADQCLIRDL--AEITDGKWTYVLD 392
            ++ L   +E++K  +    I   GIG G +    R L     +DGK     D
Sbjct: 168 IQDSL---KESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 217



>EAY08641.1 on AAW78144  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 542

 Score = 31.2 bits (69), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 79/175 (45%), Gaps = 23/175 (13%)

Query: 238 KADYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPIAE 293
           + D + ++DCSGS+     +  AV     ++Q L +        +  F    ++I+ +  
Sbjct: 46  QVDLYLLMDCSGSIRRHNWVNHAVPLAMKLIQQLNLNDNAIHLYVNVFSNNAREIIRLHS 105

Query: 294 YNNENVLLAMNMIKNIQAD--MYG-TNIYDPLKCI-------FSLEGMTKKIFLLTDGEV 343
             ++N   A+++IK++ +    YG TN+ D L  +        + E   + + +LTDG  
Sbjct: 106 DASKNKEKALSIIKSLLSTNLPYGRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIP 165

Query: 344 NNAEEILNLAEENKKFGN----IYTVGIGSGADQCLIRDL--AEITDGKWTYVLD 392
           ++ ++ L   +E++K  +    I   GIG G +    R L     +DGK     D
Sbjct: 166 DSIQDSL---KESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 217



>EAY08641.1 on AAW78138  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 542

 Score = 31.2 bits (69), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 78/173 (45%), Gaps = 23/173 (13%)

Query: 240 DYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPIAEYN 295
           D + ++DCSGS+     +  AV     ++Q L +        +  F    ++I+ +    
Sbjct: 48  DLYLLMDCSGSIRRHNWVNHAVPLAMKLIQQLNLNDNAIHLYVNVFSNNAREIIRLHSDA 107

Query: 296 NENVLLAMNMIKNIQAD--MYG-TNIYDPLKCI-------FSLEGMTKKIFLLTDGEVNN 345
           ++N   A+++IK++ +    +G TN+ D L  +        + E   + + +LTDG  N+
Sbjct: 108 SKNKEKALSIIKSLLSTNLPFGRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPNS 167

Query: 346 AEEILNLAEENKKFGN----IYTVGIGSGADQCLIRDL--AEITDGKWTYVLD 392
            ++ L   +E++K  +    I   GIG G +    R L     +DGK     D
Sbjct: 168 IQDSL---KESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 217



>EAY08641.1 on AAW78150  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 569

 Score = 31.2 bits (69), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 39/172 (22%), Positives = 71/172 (41%), Gaps = 17/172 (9%)

Query: 238 KADYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPI-- 291
           + D + ++DCSGS+     ++ AV     ++Q L +        +  F    K+I+ +  
Sbjct: 46  QVDLYLLMDCSGSIRRHNWVKHAVPLAMKLIQQLNLNDNAIHLYVNVFSNNAKEIIRLHS 105

Query: 292 -AEYNNENVLLAMNMIKNIQADMYGTNIYDPLKCI-------FSLEGMTKKIFLLTDGEV 343
            A  N E  L+ +  + +       TN+ D L  +        + E   + + +LTDG  
Sbjct: 106 DASKNKEKALIIIKSLLSTNLPYGKTNLTDALLQVRKHLNDRINRENANQLVVILTDGIP 165

Query: 344 NNAEEILNLAEENKKFG-NIYTVGIGSGADQCLIRDL--AEITDGKWTYVLD 392
           ++ ++ L  + +    G  I   GIG G +    R L     +DGK     D
Sbjct: 166 DSIQDSLKESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 217



>EAY08641.1 on AAW78152  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 542

 Score = 31.2 bits (69), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 78/173 (45%), Gaps = 23/173 (13%)

Query: 240 DYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPIAEYN 295
           D + ++DCSGS+     +  AV     ++Q L +        +  F    ++I+ +    
Sbjct: 48  DLYLLMDCSGSIRRHNWVNHAVPLAMKLIQQLNLNDNAIHLYVNVFSNNAREIIRLHSDA 107

Query: 296 NENVLLAMNMIKNIQAD--MYG-TNIYDPLKCI-------FSLEGMTKKIFLLTDGEVNN 345
           ++N   A+++IK++ +    +G TN+ D L  +        + E   + + +LTDG  N+
Sbjct: 108 SKNKEKALSIIKSLLSTNLPFGRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPNS 167

Query: 346 AEEILNLAEENKKFGN----IYTVGIGSGADQCLIRDL--AEITDGKWTYVLD 392
            ++ L   +E++K  +    I   GIG G +    R L     +DGK     D
Sbjct: 168 IQDSL---KESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 217



>EAY08641.1 on AAW78141  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 545

 Score = 30.4 bits (67), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 68/170 (40%), Gaps = 17/170 (10%)

Query: 240 DYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPI---A 292
           D + ++DCSGS+     +  AV     ++Q L +           F    ++I+ +   A
Sbjct: 48  DLYLLMDCSGSIRRHNWVNHAVPLAMKLIQQLNLNDNAIHLYANVFSNNAREIIRLHSDA 107

Query: 293 EYNNENVLLAMNMIKNIQADMYGTNIYDPLKCI-------FSLEGMTKKIFLLTDGEVNN 345
             N E  L+ +  + N       TN+ D L  +        + E   + + +LTDG  ++
Sbjct: 108 SKNKEKALIIIKSLLNTNLPFGRTNLSDALLQVRKHLNDRINRENANQLVVILTDGIPDS 167

Query: 346 AEEILNLAEENKKFG-NIYTVGIGSGADQCLIRDL--AEITDGKWTYVLD 392
            ++ L  + +    G  I   GIG G +    R L     +DGK     D
Sbjct: 168 IQDSLKESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 217



>EAY08641.1 on AAW78135  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 545

 Score = 30.4 bits (67), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 68/170 (40%), Gaps = 17/170 (10%)

Query: 240 DYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPI---A 292
           D + ++DCSGS+     +  AV     ++Q L +           F    ++I+ +   A
Sbjct: 48  DVYLLMDCSGSIRRHNWVNHAVPLAMKLIQQLNLNDNAIHLYANVFSNNAREIIRLHSDA 107

Query: 293 EYNNENVLLAMNMIKNIQADMYGTNIYDPLKCI-------FSLEGMTKKIFLLTDGEVNN 345
             N E  L+ +  + N       TN+ D L  +        + E   + + +LTDG  ++
Sbjct: 108 SKNKEKALIIIKSLLNTNLPFGRTNLSDALLQVRKHLNDRINRENANQLVVILTDGIPDS 167

Query: 346 AEEILNLAEENKKFG-NIYTVGIGSGADQCLIRDL--AEITDGKWTYVLD 392
            ++ L  + +    G  I   GIG G +    R L     +DGK     D
Sbjct: 168 IQDSLKESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 217



>EAY08641.1 on AAW78165  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 30.4 bits (67), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 68/170 (40%), Gaps = 17/170 (10%)

Query: 240 DYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPI---A 292
           D + ++DCSGS+     +  AV     ++Q L +           F    ++I+ +   A
Sbjct: 48  DLYLLMDCSGSIRRHNWVNHAVPLAMKLIQQLNLNDNAIHLYANVFSNNAREIIRLHSDA 107

Query: 293 EYNNENVLLAMNMIKNIQADMYGTNIYDPLKCI-------FSLEGMTKKIFLLTDGEVNN 345
             N E  L+ +  + N       TN+ D L  +        + E   + + +LTDG  ++
Sbjct: 108 SKNKEKALIIIKSLLNTNLPFGRTNLSDALLQVRKHLNDRINRENANQLVVILTDGIPDS 167

Query: 346 AEEILNLAEENKKFG-NIYTVGIGSGADQCLIRDL--AEITDGKWTYVLD 392
            ++ L  + +    G  I   GIG G +    R L     +DGK     D
Sbjct: 168 IQDSLKESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 217



>EAY08641.1 on AAA29778  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 562

 Score = 30.4 bits (67), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 39/172 (22%), Positives = 70/172 (40%), Gaps = 17/172 (9%)

Query: 238 KADYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPI-- 291
           + D + ++DCSGS+     +  AV     ++Q L +        +  F    K+I+ +  
Sbjct: 46  EVDLYLLMDCSGSIRRHNWVNHAVPLAMKLIQQLNLNDNAIHLYVNVFSNNAKEIIRLHS 105

Query: 292 -AEYNNENVLLAMNMIKNIQADMYGTNIYDPLKCI-------FSLEGMTKKIFLLTDGEV 343
            A  N E  L+ +  + +       TN+ D L  +        + E   + + +LTDG  
Sbjct: 106 DASKNKEKALIIIRSLLSTNLPYGRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIP 165

Query: 344 NNAEEILNLAEENKKFG-NIYTVGIGSGADQCLIRDL--AEITDGKWTYVLD 392
           ++ ++ L  + +    G  I   GIG G +    R L     +DGK     D
Sbjct: 166 DSIQDSLKESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 217



>EAY08641.1 on AAW78161  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 554

 Score = 30.4 bits (67), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 68/170 (40%), Gaps = 17/170 (10%)

Query: 240 DYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPI---A 292
           D + ++DCSGS+     +  AV     ++Q L +           F    ++I+ +   A
Sbjct: 48  DLYLLMDCSGSIRRHNWVNHAVPLAMKLIQQLNLNDNAIHLYANVFSNNAREIIRLHSDA 107

Query: 293 EYNNENVLLAMNMIKNIQADMYGTNIYDPLKCI-------FSLEGMTKKIFLLTDGEVNN 345
             N E  L+ +  + N       TN+ D L  +        + E   + + +LTDG  ++
Sbjct: 108 SKNKEKALIIIKSLLNTNLPFGRTNLSDALLQVRKHLNDRINRENANQLVVILTDGIPDS 167

Query: 346 AEEILNLAEENKKFG-NIYTVGIGSGADQCLIRDL--AEITDGKWTYVLD 392
            ++ L  + +    G  I   GIG G +    R L     +DGK     D
Sbjct: 168 IQDSLKESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 217



>EAY08641.1 on AAW78176  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 545

 Score = 30.4 bits (67), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 17/170 (10%)

Query: 240 DYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPIAEYN 295
           D + ++DCSGS+     +  AV     ++Q L +           F    ++I+ +    
Sbjct: 48  DLYLLMDCSGSIRRHNWVNHAVPLAMKLIQQLNLNDNAIHLYANVFSNNAREIIRLHSDA 107

Query: 296 NENVLLAMNMIKNIQAD--MYG-TNIYDPLKCI-------FSLEGMTKKIFLLTDGEVNN 345
           ++N   A+++IK++ +    +G TN+ D L  +        + E   + + +LTDG  N+
Sbjct: 108 SKNKEKALSIIKSLLSTNLPFGRTNLSDALLQVRKHLNDRINRENANQLVVILTDGIPNS 167

Query: 346 AEEILNLAEENKKFG-NIYTVGIGSGADQCLIRDL--AEITDGKWTYVLD 392
            ++ L  + +    G  I   GIG G +    R L     +DGK     D
Sbjct: 168 IQDSLKESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 217



>EAY08641.1 on AAW78132  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 30.4 bits (67), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 68/170 (40%), Gaps = 17/170 (10%)

Query: 240 DYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPI---A 292
           D + ++DCSGS+     +  AV     ++Q L +           F    ++I+ +   A
Sbjct: 48  DLYLLMDCSGSIRRHNWVNHAVPLAMKLIQQLNLNDNAIHLYANVFSNNAREIIRLHSDA 107

Query: 293 EYNNENVLLAMNMIKNIQADMYGTNIYDPLKCI-------FSLEGMTKKIFLLTDGEVNN 345
             N E  L+ +  + N       TN+ D L  +        + E   + + +LTDG  ++
Sbjct: 108 SKNKEKALIIIKSLLNTNLPFGRTNLSDALLQVRKHLNDRINRENANQLVVILTDGIPDS 167

Query: 346 AEEILNLAEENKKFG-NIYTVGIGSGADQCLIRDL--AEITDGKWTYVLD 392
            ++ L  + +    G  I   GIG G +    R L     +DGK     D
Sbjct: 168 IQDSLKESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 217



>EAY08641.1 on AAW78160  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 557

 Score = 30.0 bits (66), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 68/170 (40%), Gaps = 17/170 (10%)

Query: 240 DYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPI---A 292
           D + ++DCSGS+     +  AV     ++Q L +           F    ++I+ +   A
Sbjct: 48  DLYLLMDCSGSIRRHNWVNHAVPLAMKLIQQLNLNDNAIHLYANVFSNNAREIIRLHSDA 107

Query: 293 EYNNENVLLAMNMIKNIQADMYGTNIYDPLKCI-------FSLEGMTKKIFLLTDGEVNN 345
             N E  L+ +  + N       TN+ D L  +        + E   + + +LTDG  ++
Sbjct: 108 SKNKEKALIIIKSLLNTNLPFGRTNLSDALLQVRKHLNDRINRENANQLVVILTDGIPDS 167

Query: 346 AEEILNLAEENKKFG-NIYTVGIGSGADQCLIRDL--AEITDGKWTYVLD 392
            ++ L  + +    G  I   GIG G +    R L     +DGK     D
Sbjct: 168 IQDSLKESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 217



>EAY08641.1 on AAW78164  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 30.0 bits (66), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 68/170 (40%), Gaps = 17/170 (10%)

Query: 240 DYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPI---A 292
           D + ++DCSGS+     +  AV     ++Q L +           F    ++I+ +   A
Sbjct: 48  DLYLLMDCSGSIRRHNWVNHAVPLAMKLIQQLNLNENAIHLYANVFSNNAREIIRLHSDA 107

Query: 293 EYNNENVLLAMNMIKNIQADMYGTNIYDPLKCI-------FSLEGMTKKIFLLTDGEVNN 345
             N E  L+ +  + +       TN+ D L  +        + E   + + +LTDG  N+
Sbjct: 108 SKNKEKALIIIKSLLSTNLPFGRTNLSDALLQVRKHLNDRINRENANQLVVILTDGIPNS 167

Query: 346 AEEILNLAEENKKFG-NIYTVGIGSGADQCLIRDL--AEITDGKWTYVLD 392
            ++ L  + +    G  I   GIG G +    R L     +DGK     D
Sbjct: 168 IQDSLKESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 217



>EAY08641.1 on AAA29773  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 568

 Score = 30.0 bits (66), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 75/170 (44%), Gaps = 17/170 (10%)

Query: 240 DYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPIAEYN 295
           D + ++DCSGS+     +  AV     ++Q L +        +  F    K+I+ +    
Sbjct: 48  DVYLLMDCSGSIRRHNWVNHAVPLAMKLIQQLNLNDNAIHLYVNVFSNNAKEIIRLHSDA 107

Query: 296 NENVLLAMNMIKNIQAD--MYG-TNIYDPLKCI-------FSLEGMTKKIFLLTDGEVNN 345
           ++N   A+++IK++ +    +G TN+ D L  +        + E   + + +LTDG  ++
Sbjct: 108 SKNKEKALSIIKSLLSTNLPFGRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPDS 167

Query: 346 AEEILNLAEE-NKKFGNIYTVGIGSGADQCLIRDL--AEITDGKWTYVLD 392
            ++ L  +   N +   I   GIG G +    R L     +DGK     D
Sbjct: 168 IQDSLKESRNLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 217



>EAY08641.1 on AAQ11894  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 559

 Score = 30.0 bits (66), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 76/170 (44%), Gaps = 17/170 (10%)

Query: 240 DYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPIAEYN 295
           D + ++DCSGS+     ++ AV     ++Q L +        +  F    K+I+ +    
Sbjct: 48  DLYLLMDCSGSIRRHNWVKHAVPLAMKLIQQLNLNENAIHLYVNIFSNNAKEIIRLHSDA 107

Query: 296 NENVLLAMNMIKNIQAD--MYG-TNIYDPLKCI-------FSLEGMTKKIFLLTDGEVNN 345
           ++N   A+ +IK++ +    YG TN+ D L  +        + E   + + +LTDG  ++
Sbjct: 108 SKNKEKALIIIKSLLSTNLPYGRTNLSDALLQVRKHLNDRINRENANQLVVILTDGIPDS 167

Query: 346 AEEILNLAEE-NKKFGNIYTVGIGSGADQCLIRDL--AEITDGKWTYVLD 392
            ++ L  + + N +   I   GIG G +    R L     +DGK     D
Sbjct: 168 IQDSLKESRKLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 217



>EAY08641.1 on AAQ11891  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 559

 Score = 30.0 bits (66), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 17/170 (10%)

Query: 240 DYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPIAEYN 295
           D + ++DCSGS+     +  AV     ++Q L +        +  F    K+I+ +    
Sbjct: 48  DLYLLMDCSGSIRRHNWVNHAVPLAMKLIQQLNLNENTIHLYVNIFSNNAKEIIRLHSDA 107

Query: 296 NENVLLAMNMIKNIQAD--MYG-TNIYDPLKCI-------FSLEGMTKKIFLLTDGEVNN 345
           ++N   A+ +IK++ +    YG TN+ D L  +        + E   + + +LTDG  ++
Sbjct: 108 SKNKEKALIIIKSLLSTNLPYGRTNLSDALLQVRKHLNDRINRENANQLVVILTDGIPDS 167

Query: 346 AEEILNLAEE-NKKFGNIYTVGIGSGADQCLIRDL--AEITDGKWTYVLD 392
            ++ L  + + N +   I   GIG G +    R L     +DGK     D
Sbjct: 168 IQDSLKESRKLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 217



>EAY08641.1 on AAW78139  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 545

 Score = 30.0 bits (66), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 40/175 (22%), Positives = 80/175 (45%), Gaps = 23/175 (13%)

Query: 238 KADYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPIAE 293
           + D + ++DCSGS+     ++ AV     ++Q L +        +  F    ++I+ +  
Sbjct: 46  QVDLYLLMDCSGSIRRHNWVKHAVPLAMKLIQQLNLNDNAIHLYVNVFSNNAREIIRLHS 105

Query: 294 YNNENVLLAMNMIKNIQAD--MYG-TNIYDPLKCI-------FSLEGMTKKIFLLTDGEV 343
             ++N   A+++IK++ +    +G TN+ D L  +        + E   + + +LTDG  
Sbjct: 106 DASKNKEKALSIIKSLLSTNLPFGRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIP 165

Query: 344 NNAEEILNLAEENKKFGN----IYTVGIGSGADQCLIRDL--AEITDGKWTYVLD 392
           ++ ++ L   +E++K  +    I   GIG G +    R L     +DGK     D
Sbjct: 166 DSIQDSL---KESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 217



>EAY08641.1 on AAW78151  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 545

 Score = 29.6 bits (65), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 72/173 (41%), Gaps = 23/173 (13%)

Query: 240 DYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPI---A 292
           D + ++DCSGS+     +  AV     ++Q L +        +  F    K+I+ +   A
Sbjct: 48  DLYLLMDCSGSIRRHNWVNHAVPLAMKLIQQLNLNDNAIHLYVNVFSNNAKEIIRLHSDA 107

Query: 293 EYNNENVLLAMNMIKNIQADMYGTNIYDPLKCI-------FSLEGMTKKIFLLTDGEVNN 345
             N E  L+ +  + +       TN+ D L  +        + E   + + +LTDG  ++
Sbjct: 108 SKNKEKALIIIRSLLSTNLPYGRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPDS 167

Query: 346 AEEILNLAEENKKFGN----IYTVGIGSGADQCLIRDL--AEITDGKWTYVLD 392
            ++ L   +E++K  +    I   GIG G +    R L     +DGK     D
Sbjct: 168 IQDSL---KESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 217



>EAY08641.1 on AAW78137  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 545

 Score = 29.6 bits (65), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 75/170 (44%), Gaps = 17/170 (10%)

Query: 240 DYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPIAEYN 295
           D + ++DCSGS+     +  AV     ++Q L +        +  F    ++I+ +    
Sbjct: 48  DLYLLMDCSGSIRRHNWVNHAVPLAMKLIQQLNLNDNAIHLYVNVFSNNAREIIRLHSDA 107

Query: 296 NENVLLAMNMIKNIQAD--MYG-TNIYDPLKCI-------FSLEGMTKKIFLLTDGEVNN 345
           ++N   A+ +IK++ +    YG TN+ D L  +        + E   + + +LTDG  ++
Sbjct: 108 SKNKEKALIIIKSLLSTNLPYGRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPDS 167

Query: 346 AEEILNLAEE-NKKFGNIYTVGIGSGADQCLIRDL--AEITDGKWTYVLD 392
            ++ L  + + N +   I   GIG G +    R L     +DGK     D
Sbjct: 168 IQDSLKESRKLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 217



>EAY08641.1 on AAW78167  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 575

 Score = 29.6 bits (65), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 40/175 (22%), Positives = 74/175 (42%), Gaps = 23/175 (13%)

Query: 238 KADYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPI-- 291
           + D + ++DCSGS+     ++ AV     ++Q L +        +  F    K+I+ +  
Sbjct: 46  QVDLYLLMDCSGSIRRHNWVKHAVPLAMKLIQQLNLNENAIHLYVNVFSNNAKEIIRLHS 105

Query: 292 -AEYNNENVLLAMNMIKNIQADMYGTNIYDPLKCI-------FSLEGMTKKIFLLTDGEV 343
            A  N E  L+ +  + +       TN+ D L  +        + E   + + +LTDG  
Sbjct: 106 DASKNKEKALIIIRSLLSTNLPYGKTNLTDALLQVRKHLNDRINRENANQLVVILTDGIP 165

Query: 344 NNAEEILNLAEENKKFGN----IYTVGIGSGADQCLIRDL--AEITDGKWTYVLD 392
           ++ ++ L   +E++K  +    I   GIG G +    R L     +DGK     D
Sbjct: 166 DSIQDSL---KESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 217



>EAY08641.1 on AAA29772  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 565

 Score = 29.6 bits (65), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 40/175 (22%), Positives = 73/175 (41%), Gaps = 23/175 (13%)

Query: 238 KADYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPI-- 291
           + D + ++DCSGS+     +  AV     ++Q L +        +  F    K+I+ +  
Sbjct: 46  EVDLYLLMDCSGSIRRHNWVNHAVPLAMKLIQQLNLNDNAIHLYVNVFSNNAKEIIRLHS 105

Query: 292 -AEYNNENVLLAMNMIKNIQADMYGTNIYDPLKCI-------FSLEGMTKKIFLLTDGEV 343
            A  N E  L+ +  + +       TN+ D L  +        + E   + + +LTDG  
Sbjct: 106 DASKNKEKALIIIRSLLSTNLPYGRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIP 165

Query: 344 NNAEEILNLAEENKKFGN----IYTVGIGSGADQCLIRDL--AEITDGKWTYVLD 392
           ++ ++ L   +E++K  +    I   GIG G +    R L     +DGK     D
Sbjct: 166 DSIQDSL---KESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 217



>EAY08641.1 on AAW78133  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 29.6 bits (65), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 72/173 (41%), Gaps = 23/173 (13%)

Query: 240 DYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPI---A 292
           D + ++DCSGS+     +  AV     ++Q L +        +  F    K+I+ +   A
Sbjct: 48  DLYLLMDCSGSIRRHNWVNHAVPLAMKLIQQLNLNDNAIHLYVNVFSNNAKEIIRLHSDA 107

Query: 293 EYNNENVLLAMNMIKNIQADMYGTNIYDPLKCI-------FSLEGMTKKIFLLTDGEVNN 345
             N E  L+ +  + +       TN+ D L  +        + E   + + +LTDG  ++
Sbjct: 108 SKNKEKALIIIRSLLSTNLPYGRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPDS 167

Query: 346 AEEILNLAEENKKFGN----IYTVGIGSGADQCLIRDL--AEITDGKWTYVLD 392
            ++ L   +E++K  +    I   GIG G +    R L     +DGK     D
Sbjct: 168 IQDSL---KESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 217



>EAY08641.1 on AAW78162  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 542

 Score = 29.6 bits (65), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 39/172 (22%), Positives = 68/172 (39%), Gaps = 17/172 (9%)

Query: 238 KADYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPI-- 291
           + D + ++DCSGS+     +  AV     ++Q L +           F    ++I+ +  
Sbjct: 46  QVDLYLLMDCSGSIRRHNWVNHAVPLAMKLIQQLNLNDNAIHLYASVFSNNAREIIRLHS 105

Query: 292 -AEYNNENVLLAMNMIKNIQADMYGTNIYDPLKCI-------FSLEGMTKKIFLLTDGEV 343
            A  N E  L+ +  + N       TN+ D L  +        + E   + + +LTDG  
Sbjct: 106 DASKNKEKALIIIKSLLNTNLPFGRTNLSDALLQVRKHLNDRINRENANQLVVILTDGIP 165

Query: 344 NNAEEILNLAEENKKFG-NIYTVGIGSGADQCLIRDL--AEITDGKWTYVLD 392
           ++ +  L  + +    G  I   GIG G +    R L     +DGK     D
Sbjct: 166 DSIQGSLKESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 217



>EAY08641.1 on AAW78174  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 29.6 bits (65), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 72/173 (41%), Gaps = 23/173 (13%)

Query: 240 DYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPI---A 292
           D + ++DCSGS+     +  AV     ++Q L +        +  F    K+I+ +   A
Sbjct: 48  DLYLLMDCSGSIRRHNWVNHAVPLAMKLIQQLNLNDNAIHLYVNVFSNNAKEIIRLHSDA 107

Query: 293 EYNNENVLLAMNMIKNIQADMYGTNIYDPLKCI-------FSLEGMTKKIFLLTDGEVNN 345
             N E  L+ +  + +       TN+ D L  +        + E   + + +LTDG  ++
Sbjct: 108 SKNKEKALIIIRSLLSTNLPYGRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPDS 167

Query: 346 AEEILNLAEENKKFGN----IYTVGIGSGADQCLIRDL--AEITDGKWTYVLD 392
            ++ L   +E++K  +    I   GIG G +    R L     +DGK     D
Sbjct: 168 IQDSL---KESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 217



>EAY08641.1 on AAW78172  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 545

 Score = 29.6 bits (65), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 75/170 (44%), Gaps = 17/170 (10%)

Query: 240 DYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPIAEYN 295
           D + ++DCSGS+     +  AV     ++Q L +        +  F    ++I+ +    
Sbjct: 48  DLYLLMDCSGSIRRHNWVNHAVPLAMKLIQQLNLNDNAIHLYVNVFSNNAREIIRLHSDA 107

Query: 296 NENVLLAMNMIKNIQAD--MYG-TNIYDPLKCI-------FSLEGMTKKIFLLTDGEVNN 345
           ++N   A+ +IK++ +    YG TN+ D L  +        + E   + + +LTDG  ++
Sbjct: 108 SKNKEKALIIIKSLLSTNLPYGRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPDS 167

Query: 346 AEEILNLAEE-NKKFGNIYTVGIGSGADQCLIRDL--AEITDGKWTYVLD 392
            ++ L  + + N +   I   GIG G +    R L     +DGK     D
Sbjct: 168 IQDSLKESRKLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 217



>EAY08641.1 on AAW78156  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 581

 Score = 29.6 bits (65), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 40/175 (22%), Positives = 74/175 (42%), Gaps = 23/175 (13%)

Query: 238 KADYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPI-- 291
           + D + ++DCSGS+     ++ AV     ++Q L +        +  F    K+I+ +  
Sbjct: 46  QVDLYLLMDCSGSIRRHNWVKHAVPLAMKLIQQLNLNENAIHLYVNVFSNNAKEIIRLHS 105

Query: 292 -AEYNNENVLLAMNMIKNIQADMYGTNIYDPLKCI-------FSLEGMTKKIFLLTDGEV 343
            A  N E  L+ +  + +       TN+ D L  +        + E   + + +LTDG  
Sbjct: 106 DASKNKEKALIIIRSLLSTNLPYGKTNLTDALLQVRKHLNDRINRENANQLVVILTDGIP 165

Query: 344 NNAEEILNLAEENKKFGN----IYTVGIGSGADQCLIRDL--AEITDGKWTYVLD 392
           ++ ++ L   +E++K  +    I   GIG G +    R L     +DGK     D
Sbjct: 166 DSIQDSL---KESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 217



>EAY08641.1 on AAW78148  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 29.3 bits (64), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 75/172 (43%), Gaps = 17/172 (9%)

Query: 238 KADYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPIAE 293
           + D + ++DCSGS+     +  AV     ++Q L +        +  F    ++I+ +  
Sbjct: 46  QVDLYLLMDCSGSIRRHNWVNHAVPLAMKLIQQLNLNDNAIHLYVNVFSNNAREIIRLHS 105

Query: 294 YNNENVLLAMNMIKNIQAD--MYG-TNIYDPLKCI-------FSLEGMTKKIFLLTDGEV 343
             ++N   A+ +IK++ +    YG TN+ D L  +        + E   + + +LTDG  
Sbjct: 106 DASKNKEKALIIIKSLLSTNLPYGRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIP 165

Query: 344 NNAEEILNLAEENKKFG-NIYTVGIGSGADQCLIRDL--AEITDGKWTYVLD 392
           ++ ++ L  + +    G  I   GIG G +    R L     +DGK     D
Sbjct: 166 DSIQDSLKESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 217



>EAY08641.1 on AAW78136  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 542

 Score = 29.3 bits (64), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 39/172 (22%), Positives = 68/172 (39%), Gaps = 17/172 (9%)

Query: 238 KADYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPI-- 291
           + D + ++DCSGS+     +  AV     ++Q L +           F    ++I+ +  
Sbjct: 46  QVDLYLLMDCSGSIRRHNWVNHAVPLAMKLIQQLNLNDNAIHLYANVFSNNAREIIRLHS 105

Query: 292 -AEYNNENVLLAMNMIKNIQADMYGTNIYDPLKCI-------FSLEGMTKKIFLLTDGEV 343
            A  N E  L+ +  + N       TN+ D L  +        + E   + + +LTDG  
Sbjct: 106 DASKNKEKALIIIKSLLNTNLPFGRTNLSDALLQVRKHLNDRINRENANQLVVILTDGIP 165

Query: 344 NNAEEILNLAEENKKFG-NIYTVGIGSGADQCLIRDL--AEITDGKWTYVLD 392
           ++ +  L  + +    G  I   GIG G +    R L     +DGK     D
Sbjct: 166 DSIQGSLKESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 217



>EAY08641.1 on AAW78171  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 551

 Score = 29.3 bits (64), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 75/170 (44%), Gaps = 17/170 (10%)

Query: 240 DYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPIAEYN 295
           D + ++DCSGS+     +  AV     ++Q L +        +  F    ++I+ +    
Sbjct: 48  DLYLLMDCSGSIRRHNWVNHAVPLAMKLIQQLNLNDNAIHLYVNVFSNNAREIIRLHSDA 107

Query: 296 NENVLLAMNMIKNIQAD--MYG-TNIYDPLKCI-------FSLEGMTKKIFLLTDGEVNN 345
           ++N   A+ +IK++ +    YG TN+ D L  +        + E   + + +LTDG  ++
Sbjct: 108 SKNKEKALIIIKSLLSTNLPYGRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPDS 167

Query: 346 AEEILNLAEE-NKKFGNIYTVGIGSGADQCLIRDL--AEITDGKWTYVLD 392
            ++ L  + + N +   I   GIG G +    R L     +DGK     D
Sbjct: 168 IQDSLKESRKLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 217



>EAY08641.1 on AAW78157  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 557

 Score = 29.3 bits (64), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 33/148 (22%), Positives = 62/148 (41%), Gaps = 15/148 (10%)

Query: 238 KADYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPI-- 291
           + D + ++DCSGS+     +  AV     ++Q L +        +  F    K+I+ +  
Sbjct: 46  QVDLYLLMDCSGSIRRHNWVNHAVPLAMKLIQQLNLNDNAIHLYVNVFSNNAKEIIRLHS 105

Query: 292 -AEYNNENVLLAMNMIKNIQADMYGTNIYDPLKCI-------FSLEGMTKKIFLLTDGEV 343
            A  N E  L+ +  + +       TN+ D L  +        + E   + + +LTDG  
Sbjct: 106 DASKNKEKALIIIKSLLSTNLPFGRTNLSDALLQVRKHLNDRINRENANQLVVILTDGIP 165

Query: 344 NNAEEILNLAEE-NKKFGNIYTVGIGSG 370
           ++ ++ L  +   N +   I   GIG G
Sbjct: 166 DSIQDSLKESRNLNDRGVKIAVFGIGQG 193



>EAY08641.1 on AAW78173  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 545

 Score = 29.3 bits (64), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 78/173 (45%), Gaps = 23/173 (13%)

Query: 240 DYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPIAEYN 295
           D + ++DCSGS+     +  AV     ++Q L +        +  F    ++I+ +    
Sbjct: 48  DLYLLMDCSGSIRRHNWVNHAVPLAMKLIQQLNLNDNAIHLYVNVFSNNAREIIRLHSDA 107

Query: 296 NENVLLAMNMIKNIQAD--MYG-TNIYDPLKCI-------FSLEGMTKKIFLLTDGEVNN 345
           ++N   A+++IK++ +    +G TN+ D L  +        + E   + + +LTDG  ++
Sbjct: 108 SKNKEKALSIIKSLLSTNLPFGRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPDS 167

Query: 346 AEEILNLAEENKKFGN----IYTVGIGSGADQCLIRDL--AEITDGKWTYVLD 392
            ++ L   +E++K  +    I   GIG G +    R L     +DGK     D
Sbjct: 168 IQDSL---KESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 217



>EAY08641.1 on AAW78134  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 551

 Score = 29.3 bits (64), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 75/170 (44%), Gaps = 17/170 (10%)

Query: 240 DYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPIAEYN 295
           D + ++DCSGS+     +  AV     ++Q L +        +  F    ++I+ +    
Sbjct: 48  DLYLLMDCSGSIRRHNWVNHAVPLAMKLIQQLNLNDNAIHLYVNVFSNNAREIIRLHSDA 107

Query: 296 NENVLLAMNMIKNIQAD--MYG-TNIYDPLKCI-------FSLEGMTKKIFLLTDGEVNN 345
           ++N   A+ +IK++ +    YG TN+ D L  +        + E   + + +LTDG  ++
Sbjct: 108 SKNKEKALIIIKSLLSTNLPYGRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPDS 167

Query: 346 AEEILNLAEE-NKKFGNIYTVGIGSGADQCLIRDL--AEITDGKWTYVLD 392
            ++ L  + + N +   I   GIG G +    R L     +DGK     D
Sbjct: 168 IQDSLKESRKLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 217



>EAY08641.1 on AAW78168  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 29.3 bits (64), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 75/170 (44%), Gaps = 17/170 (10%)

Query: 240 DYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPIAEYN 295
           D + ++DCSGS+     +  AV     ++Q L +        +  F    ++I+ +    
Sbjct: 48  DLYLLMDCSGSIRRHNWVNHAVPLAMKLIQQLNLNDNAIHLYVNVFSNNAREIIRLHSDA 107

Query: 296 NENVLLAMNMIKNIQAD--MYG-TNIYDPLKCI-------FSLEGMTKKIFLLTDGEVNN 345
           ++N   A+++IK++ +    +G TN+ D L  +        + E   + + +LTDG  ++
Sbjct: 108 SKNKEKALSIIKSLLSTNLPFGRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPDS 167

Query: 346 AEEILNLAEE-NKKFGNIYTVGIGSGADQCLIRDL--AEITDGKWTYVLD 392
            ++ L  +   N +   I   GIG G +    R L     +DGK     D
Sbjct: 168 IQDSLKESRNLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 217



>EAY08641.1 on AAW78175  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 542

 Score = 29.3 bits (64), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 78/175 (44%), Gaps = 23/175 (13%)

Query: 238 KADYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPIAE 293
           + D + ++DCSGS+     +  AV     ++Q L +        +  F    ++I+ +  
Sbjct: 46  QVDLYLLMDCSGSIRRHNWVNHAVPLAMKLIQQLNLNDNAIHLYVNVFSNNAREIIRLHS 105

Query: 294 YNNENVLLAMNMIKNIQAD--MYG-TNIYDPLKCI-------FSLEGMTKKIFLLTDGEV 343
             ++N   A+ +IK++ +    YG TN+ D L  +        + E   + + +LTDG  
Sbjct: 106 DASKNKEKALIIIKSLLSTNLPYGRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIP 165

Query: 344 NNAEEILNLAEENKKFGN----IYTVGIGSGADQCLIRDL--AEITDGKWTYVLD 392
           ++ ++ L   +E++K  +    I   GIG G +    R L     +DGK     D
Sbjct: 166 DSIQDSL---KESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 217



>EAY08641.1 on AAA29777  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 559

 Score = 28.9 bits (63), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 17/170 (10%)

Query: 240 DYFFVIDCSGSMEGKR-IQKAVKCLHLMLQSLPMK---CRFSIFCFGTEFKQIMPIAEYN 295
           D + ++DCSGS+     ++ AV     ++Q L +           F    K+I+ +    
Sbjct: 48  DLYLLMDCSGSIRRHNWVKHAVPLAMKLIQQLNLNENAIHLYANIFSNNAKEIIRLHSDA 107

Query: 296 NENVLLAMNMIKNIQAD--MYG-TNIYDPLKCI-------FSLEGMTKKIFLLTDGEVNN 345
           ++N   A+ +IK++ +    YG TN+ D L  +        + E   + + +LTDG  ++
Sbjct: 108 SKNKEKALIIIKSLLSTNLPYGRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIPDS 167

Query: 346 AEEILNLAEE-NKKFGNIYTVGIGSGADQCLIRDL--AEITDGKWTYVLD 392
            ++ L  + + N +   I   GIG G +    R L     +DGK     D
Sbjct: 168 IQDSLKESRKLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 217



>EAY08641.1 on AAB68611  AP51-3  (Adhesin)  [Trichomonas vaginalis]
          Length = 255

 Score = 28.5 bits (62), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 3/47 (6%)

Query: 351 NLAEENKKFGNIYTVGIGSGADQCLIRDLAEITDGKWTYVLDNENFD 397
           N  EE +K   ++   +GS A Q  +  LAE TDG+   V    NFD
Sbjct: 191 NGVEEMQKLWKLF---VGSDATQVEVNPLAETTDGRIITVDSKFNFD 234




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08645.1 hypothetical protein TVAG_240060 [Trichomonas
vaginalis G3]
         (128 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAL87662  Dynamin-like protein  (Others)  [Giardia duodenalis]         23   4.5  
XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]                 23   6.0  
XP_001349512  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   7.1  

>EAY08645.1 on AAL87662  Dynamin-like protein  (Others)  [Giardia duodenalis]
          Length = 255

 Score = 23.5 bits (49), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%)

Query: 29  PGFYTNTNEFRNFANVFVPNSKCVYDGISFQNQVYLTLSLSDDIYIGTTNTSFAIMCKCK 88
           PG   N    +  A++ V   KCVY+ I   N V L +S ++     +     AI C  K
Sbjct: 150 PGLVKNALPGQP-ADIDVQIKKCVYEYIQKPNAVILAVSAANADLATSDALQAAINCDPK 208



>EAY08645.1 on XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]
          Length = 2112

 Score = 23.5 bits (49), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 14/37 (37%), Positives = 17/37 (45%)

Query: 42  ANVFVPNSKCVYDGISFQNQVYLTLSLSDDIYIGTTN 78
           A   VP   C+ D    QN   LTL L +   IG+ N
Sbjct: 64  ATRSVPPPPCLGDDCFCQNYYDLTLILDESASIGSKN 100



>EAY08645.1 on XP_001349512  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2980

 Score = 23.1 bits (48), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 20/93 (21%), Positives = 39/93 (41%), Gaps = 12/93 (12%)

Query: 15   AAIFSHTGIVWYTTPGFYTNTNEFRNFANVFVPNSKCVYDGISFQNQVYLTLSLSDDIYI 74
            AAI +H    W+       N N  R   +  +P+         F+ Q+Y T     DI+ 
Sbjct: 1281 AAIETH--FAWHKYKK--DNVNAERELNSGIIPHE--------FKRQMYYTFGDYRDIFF 1328

Query: 75   GTTNTSFAIMCKCKECIVFAYDENKITFDRLKQ 107
            GT  ++   + +  + ++   ++  +T   +KQ
Sbjct: 1329 GTDISTHNHIPEVSQKVITILEKENLTKSEVKQ 1361




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08648.1 hypothetical protein TVAG_240090 [Trichomonas
vaginalis G3]
         (253 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001608668  variant erythrocyte surface antigen-1, alpha subun...    25   3.6  

>EAY08648.1 on XP_001608668  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1337

 Score = 25.4 bits (54), Expect = 3.6,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 2/95 (2%)

Query: 143  LPNAIEADFGFRITNVNAGSDLFGVRQSATKTGPKKSNSSDSLFIYNSFKKSSITKTELY 202
            +PN  E    +R +   A   + G + SA +  P+ +N+S S    N    S +T  ELY
Sbjct: 1079 IPNGTEVGGKYRESVGEALIKIKGDKGSAQQPAPQSNNTSLSRLTKNCQYLSPLTG-ELY 1137

Query: 203  AVINEP-SSSPLIFIILIADLFQLSSFSLSNLTSD 236
              ++     + L +++ ++D  +    SLS    D
Sbjct: 1138 TAVSATFGGTYLSWVLYLSDALEGGLQSLSEAFRD 1172




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08649.1 hypothetical protein TVAG_240100 [Trichomonas
vaginalis G3]
         (402 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_650156  CP1  (Cysteine protease)  [Entamoeba histolytica]           27   2.5  
XP_652967  Vps35  (Establishment)  [Entamoeba histolytica]             27   3.5  
XP_001349515  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   5.5  

>EAY08649.1 on XP_650156  CP1  (Cysteine protease)  [Entamoeba histolytica]
          Length = 315

 Score = 26.6 bits (57), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 10/16 (62%), Positives = 10/16 (62%)

Query: 48 FYIGEMIHFNVWVTNT 63
          FYIG  I FN WV N 
Sbjct: 8  FYIGYGIDFNTWVANN 23



>EAY08649.1 on XP_652967  Vps35  (Establishment)  [Entamoeba histolytica]
          Length = 757

 Score = 26.6 bits (57), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 7/79 (8%)

Query: 1   MDPFVIQKVYCSILCSLTTLKLEEPLKV-------SMAPQTGQFCVRTDLVTRSFYIGEM 53
           +D + I  +   +  SLT+  ++E L +       S+ P + +  + +D+VTR   + E+
Sbjct: 388 LDQYAITHLMRLLQLSLTSFGVKEMLNIYGFRNSISLLPYSKRKTLASDIVTRCVTLNEL 447

Query: 54  IHFNVWVTNTGSVSISNVT 72
           I    + +N   V I  ++
Sbjct: 448 IETKEYASNMLEVIIDLIS 466



>EAY08649.1 on XP_001349515  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 1711

 Score = 25.8 bits (55), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 41   TDLVTRSFYIGEMIHFNVWVTNTGS-VSISNVTVTYNG 77
            T +  R  Y GE   +NV + NT + + IS    TY+G
Sbjct: 1451 TSIHDRDLYSGEEYSYNVNMVNTNNDIPISGKNGTYSG 1488




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08651.1 Transaldolase, putative [Trichomonas
vaginalis G3]
         (109 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_804142   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   5.0  
XP_804407   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   5.5  

>EAY08651.1 on XP_804142   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 928

 Score = 23.1 bits (48), Expect = 5.0,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 19/37 (51%)

Query: 72  SLLKELQESNKELQSKLECKGDMLPEPTTEAETHSRH 108
           ++L  L  SNKE +  L C  +M  EP++  E    H
Sbjct: 609 TVLLGLSYSNKEKKWMLLCGEEMSNEPSSPWEPGKTH 645



>EAY08651.1 on XP_804407   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 928

 Score = 23.1 bits (48), Expect = 5.5,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 19/37 (51%)

Query: 72  SLLKELQESNKELQSKLECKGDMLPEPTTEAETHSRH 108
           ++L  L  SNKE +  L C  +M  EP++  E    H
Sbjct: 609 TVLLGLSYSNKEKKWMLLCGEEMSNEPSSPWEPGKTH 645




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08655.1 hypothetical protein TVAG_240160 [Trichomonas
vaginalis G3]
         (1070 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_845638  VSG  (Establishment)  [Trypanosoma brucei]                  27   8.8  

>EAY08655.1 on XP_845638  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 510

 Score = 26.6 bits (57), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 4/45 (8%)

Query: 183 TKTPIVIQTTQQPPIQQDAPNIRKLCEQIPKDTIFILDCSFADDC 227
           TK PI  Q    P  +  A NI K CE I    +   +CS   +C
Sbjct: 386 TKPPIASQEILTPANKDQANNISKDCEAI----VIPEECSLKSEC 426




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08680.1 hypothetical protein TVAG_079380 [Trichomonas
vaginalis G3]
         (225 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001611897  variant erythrocyte surface antigen-1, alpha subun...    27   1.2  

>EAY08680.1 on XP_001611897  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1369

 Score = 26.9 bits (58), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 29/69 (42%)

Query: 145  YVFGFENPQPYIPHPFVSSHRPKTPRPVTASARMRNTDEFGIKLKKKVKLSSKREVPISK 204
            Y  GF    P+    F   ++ K    +      +   EF   LKK ++ + K +   +K
Sbjct: 1202 YRHGFSYGNPFNLEGFEQENKEKGDYSIDNKGGKKRCHEFLESLKKVIESTEKDQQKDTK 1261

Query: 205  ESSLTNSLT 213
            E  LTN L+
Sbjct: 1262 EHPLTNLLS 1270




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08682.1 hypothetical protein TVAG_079400 [Trichomonas
vaginalis G3]
         (226 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_821390   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   0.89 
XP_001350415  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   1.5  
XP_001351876  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   1.6  
XP_816523   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   2.0  
XP_001608668  variant erythrocyte surface antigen-1, alpha subun...    26   2.6  
ABR92030  MSA-1  (Invasion)  [Babesia bovis]                           25   4.1  

>EAY08682.1 on XP_821390   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 940

 Score = 27.3 bits (59), Expect = 0.89,   Method: Composition-based stats.
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)

Query: 184 KIMNSSNSKSTTPSPQKSKPSTPLVIETP 212
           K  ++   K  TPSP+ SKP+T L  ETP
Sbjct: 726 KAKDTKTVKEGTPSPEASKPAT-LETETP 753



>EAY08682.1 on XP_001350415  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3056

 Score = 26.6 bits (57), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 16/106 (15%)

Query: 85   NLKNDPNSSLEVKIAGLNP------SERLVLLRKWKEQ----KINSEKSKRLRL----EE 130
            N K   N +  +   G+ P       + +   ++W EQ    ++  EK+ R       + 
Sbjct: 1417 NKKQKKNGTFSIDECGIFPPTGNDEDQSVSWFKEWSEQFCIERLQYEKNIRDACTNNGQG 1476

Query: 131  DVFIQQLNREIERYKSLITSAKSQNQDKQVSQIE-KRIQKVSADLI 175
            D       R+ E YK  I S K Q  DKQ ++ E K + K ++DL+
Sbjct: 1477 DKIQGDCKRKCEEYKKYI-SEKKQEWDKQKTKYENKYVGKSASDLL 1521



>EAY08682.1 on XP_001351876  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3164

 Score = 26.6 bits (57), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 72/183 (39%), Gaps = 36/183 (19%)

Query: 40  KSNSSIQEIHEEFNRYIKKLLKISMVSNEQEIYSDVIDCFNNYANNLKNDPNSSLEVKIA 99
           K    I   HE F  ++K LLK +M     +  +++ DC NN   N+  D N        
Sbjct: 569 KGAEKITSFHEFFELWVKNLLKDTM-----KWENEIKDCINN--TNI-TDCNDEC----- 615

Query: 100 GLNPSERLVLLRKWKEQKINSEKSKRLRLEEDVFIQ-----QLNREIERYKSLITSAKSQ 154
               ++  V   KW +QK    K+ +   E   +IQ      +N+  E +   + S   Q
Sbjct: 616 ----NKNCVCFDKWVKQKEEEWKNVKKVFENKKYIQDKYYLDINKLFESFLFKVISELDQ 671

Query: 155 NQDK------------QVSQIEKRIQKVSADLIFLIDHL--NWKIMNSSNSKSTTPSPQK 200
            + K            + S+  + I+   + +  L+DHL  +      +N+     S QK
Sbjct: 672 GEAKWNQLKEELKKKIESSKANEGIKDSESAIELLLDHLKESATTCKDNNANEACSSSQK 731

Query: 201 SKP 203
           S P
Sbjct: 732 SSP 734



>EAY08682.1 on XP_816523   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 892

 Score = 26.2 bits (56), Expect = 2.0,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 2/53 (3%)

Query: 157 DKQVSQIEKRIQKVSADLIFLIDHLNWKIMNSSNSKSTTPSPQK--SKPSTPL 207
           ++Q++  E R   +S DLI    H++    +S++   +TP+ +   S PSTP+
Sbjct: 641 NRQLNAEEIRTLFLSQDLIGTEAHMDSSSDSSAHGTPSTPADRSAHSAPSTPV 693



>EAY08682.1 on XP_001608668  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1337

 Score = 25.8 bits (55), Expect = 2.6,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 8/81 (9%)

Query: 111 RKWKEQKINSEKSKRLRLEEDVFIQQLNREIERYKSLITSAKSQNQDKQVSQIEKRIQKV 170
           +K  E K   EK+K   +E +V +    +E+E  K  +  AK++  + +++++EK+++ +
Sbjct: 722 QKLGEAKKELEKAKE-AVESEVGMD--GKELEEAKKAVEKAKTEGDNVRMAKLEKKMKAL 778

Query: 171 SADLIFLIDHLNWKIMNSSNS 191
                   D LN K+M S  S
Sbjct: 779 EN----AKDALN-KLMTSGGS 794



>EAY08682.1 on ABR92030  MSA-1  (Invasion)  [Babesia bovis]
          Length = 328

 Score = 25.0 bits (53), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 24/112 (21%), Positives = 52/112 (46%), Gaps = 16/112 (14%)

Query: 113 WKEQKINSEKSKRLRLEEDVFIQQLNREIERYKSLITSAKSQNQDKQVS---QIEKRIQK 169
           W EQ        +L +  D F++  N++++   + +  +  +   ++V+   + E++IQ 
Sbjct: 192 WYEQSY----FYKLAVCFDDFVKGKNQDVK--GNFVQPSSDEAPPQEVTTAIETEEKIQG 245

Query: 170 VSADLIFLIDHLNWKIMNSSNSKSTTPSPQKSKPSTPLVIETPRNSTNAKLE 221
            SA           ++  +  ++  TP+ Q SKP+T    E P  S ++ +E
Sbjct: 246 TSA-------QGRPQVPEAEQTQQVTPAVQPSKPTTGKPTEDPAASGSSPVE 290




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08683.1 hypothetical protein TVAG_079410 [Trichomonas
vaginalis G3]
         (194 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08684.1 hypothetical protein TVAG_079420 [Trichomonas
vaginalis G3]
         (446 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351080  PfEMP1  (Establishment)  [Plasmodium falciparum]         36   0.005
XP_818344   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   7.0  
XP_001349438  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   9.7  

>EAY08684.1 on XP_001351080  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2209

 Score = 36.2 bits (82), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 22/148 (14%)

Query: 211 CQIQAAKNELQKKVQQENQEKNQEIVKELEKFDEDSKRLLKELLATEKKMRAELEQQHEK 270
           C   A KN +Q+K  +   +KN+E    +   D+D       +L  +KK R +LE     
Sbjct: 532 CGNGAKKNNIQEKTWKCYYDKNKE--NSIGGGDKDYC-----VLKNDKKNRTQLEI---- 580

Query: 271 EITENEQLW---------TSDVKLKNYNAPTNALMSLKKQINLLTVQCRFKEASVVTKEY 321
            ++ N   W         + D + +  N   N   S  K +      C  K     TKE+
Sbjct: 581 -VSFNSLFWRWVTEMLKDSIDWRKEYKNCINNGDKSTCKNVCKKPCDCFQKWGVRKTKEW 639

Query: 322 QRQKAHEEKESFAQMQHDYDEALTKILD 349
           Q+ KAH EKE F +    Y + L  +LD
Sbjct: 640 QQVKAHYEKEDFGKGLTPY-KTLEWVLD 666



>EAY08684.1 on XP_818344   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 928

 Score = 25.8 bits (55), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 13/47 (27%), Positives = 21/47 (44%)

Query: 349 DRQKEELKAFDAQTEIRVKHFEVTRGKERKAIENKLQINKNTAETAQ 395
           D  +E  +  D Q +I  +H EV       ++ N  Q+N   A T +
Sbjct: 862 DANEETAEGRDGQEDIHAQHGEVNAAALSSSLGNVSQVNNTDAGTVR 908



>EAY08684.1 on XP_001349438  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2265

 Score = 25.4 bits (54), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 17/67 (25%), Positives = 37/67 (55%), Gaps = 4/67 (5%)

Query: 102  LSLYRNSTDAALAARRRPSDSSAPVS---PRLASPRMNNFRRSMPIFK-IPESGPEIQKY 157
            ++L  ++T +A++   R S++++  S   P L +P++++F    P F+ + E G    K 
Sbjct: 1206 VTLEEDNTSSAMSTSPRTSETTSASSDNTPTLNNPKLSDFVLRPPYFRYLEEWGQNFCKK 1265

Query: 158  KEQALNK 164
            + + L K
Sbjct: 1266 RTEMLEK 1272




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08685.1 hypothetical protein TVAG_079430 [Trichomonas
vaginalis G3]
         (112 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAM47175  Rh4  (Adhesin)  [Plasmodium falciparum]                      23   6.4  

>EAY08685.1 on AAM47175  Rh4  (Adhesin)  [Plasmodium falciparum]
          Length = 1711

 Score = 23.1 bits (48), Expect = 6.4,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 26/59 (44%)

Query: 51  VELLATKYPDSLQKFLPQLEKEYKFWMETEGKTVTMKDGEVLNRYFDKFSTPREEMYRN 109
           +E    K+  +++  +  +EK+  +   ++      K   ++N Y D+  T    +Y N
Sbjct: 241 LEKYTNKFEHNIKPHIEDIEKKVNYINNSDCHLTCSKYKTIINNYIDEIITTNTNIYEN 299




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08686.1 hypothetical protein TVAG_079440 [Trichomonas
vaginalis G3]
         (70 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001349515  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   0.098
XP_803379  VSG  (Establishment)  [Trypanosoma brucei]                  23   1.7  
XP_001611736  variant erythrocyte surface antigen-1, alpha subun...    22   4.7  
CAD98301  Subtilase  (Others)  [Cryptosporidium parvum]                22   5.1  
XP_812956   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   6.1  
XP_001350797  PfEMP1  (Establishment)  [Plasmodium falciparum]         22   6.8  
XP_001350413  PfEMP1  (Establishment)  [Plasmodium falciparum]         22   6.9  
XP_808081   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   7.2  
XP_815234   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           21   9.8  
XP_812850   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           21   9.8  
XP_810676   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           21   9.8  

>EAY08686.1 on XP_001349515  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 1711

 Score = 26.6 bits (57), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 13/44 (29%), Positives = 22/44 (50%)

Query: 7  NSTANEIKNRWTSMVKNVYENTFKLLEKYNVVEAGNTGGGEYPN 50
          +S    +K+ +  + K VYE T K+ ++Y     G+     YPN
Sbjct: 9  SSRDESVKDLFDRIGKKVYEKTEKIAKRYTTELHGDLSKATYPN 52



>EAY08686.1 on XP_803379  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 532

 Score = 23.1 bits (48), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 1   MKNYSLNSTANEIKNRWTSMVKNVYENTFKLLEKYNVV 38
           + NY  N T    K +WTS ++N+  N  +   +YN +
Sbjct: 329 IPNYKSNPTDGIKKLQWTSTLENL-ANKLEARTRYNTI 365



>EAY08686.1 on XP_001611736  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1365

 Score = 21.9 bits (45), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 11/35 (31%), Positives = 14/35 (40%)

Query: 17  WTSMVKNVYENTFKLLEKYNVVEAGNTGGGEYPNQ 51
           WT   + V +     L K  V E G  GG  +  Q
Sbjct: 755 WTRPFRTVLKKVLDELVKKKVKELGKAGGQTHDGQ 789



>EAY08686.1 on CAD98301  Subtilase  (Others)  [Cryptosporidium parvum]
          Length = 255

 Score = 21.9 bits (45), Expect = 5.1,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 11/24 (45%)

Query: 46  GEYPNQDGFGWTNGVYCAFDEEKD 69
           G+YP  DG  +   V  A  E  D
Sbjct: 158 GQYPKLDGVAFLTRVVSALSESAD 181



>EAY08686.1 on XP_812956   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1005

 Score = 21.6 bits (44), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 15/48 (31%), Positives = 25/48 (52%)

Query: 23  NVYENTFKLLEKYNVVEAGNTGGGEYPNQDGFGWTNGVYCAFDEEKDL 70
           +VY +T   ++ Y + E  N   G   N+ G+G  +G   A  EEK++
Sbjct: 287 DVYMSTGSGVDWYTLGEPINRVWGNSRNRKGYGVQSGSTTAIIEEKEV 334



>EAY08686.1 on XP_001350797  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2287

 Score = 21.6 bits (44), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 12/28 (42%), Positives = 15/28 (53%)

Query: 9    TANEIKNRWTSMVKNVYENTFKLLEKYN 36
            T NE KN  T+  K+  +     LEKYN
Sbjct: 2163 TKNEFKNMDTTPNKSTMDTMLDDLEKYN 2190



>EAY08686.1 on XP_001350413  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2860

 Score = 21.6 bits (44), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 9/26 (34%), Positives = 16/26 (61%)

Query: 11   NEIKNRWTSMVKNVYENTFKLLEKYN 36
            N+I+N+   + KN+Y++    L  YN
Sbjct: 1816 NQIENKLQQVFKNIYDSNKHKLSNYN 1841



>EAY08686.1 on XP_808081   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 893

 Score = 21.6 bits (44), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 2/33 (6%)

Query: 15  NRWTSMVKNVYENTFKLLEKYNVVEAGNTGGGE 47
           +R T++VK    + + L+ KYN  +A  +GGG+
Sbjct: 165 SRPTTIVKG--NDIYMLVGKYNRDDAQESGGGD 195



>EAY08686.1 on XP_815234   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1032

 Score = 21.2 bits (43), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 8/14 (57%), Positives = 8/14 (57%)

Query: 52  DGFGWTNGVYCAFD 65
           DG  WTNG    FD
Sbjct: 136 DGGEWTNGTAIVFD 149



>EAY08686.1 on XP_812850   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1032

 Score = 21.2 bits (43), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 8/14 (57%), Positives = 8/14 (57%)

Query: 52  DGFGWTNGVYCAFD 65
           DG  WTNG    FD
Sbjct: 136 DGGEWTNGTAIVFD 149



>EAY08686.1 on XP_810676   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1040

 Score = 21.2 bits (43), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 8/14 (57%), Positives = 8/14 (57%)

Query: 52  DGFGWTNGVYCAFD 65
           DG  WTNG    FD
Sbjct: 137 DGGEWTNGTAIVFD 150




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08687.1 CAMK family protein kinase [Trichomonas
vaginalis G3]
         (365 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    27   2.5  
XP_001610720  variant erythrocyte surface antigen-1, beta subuni...    25   6.4  
XP_001608664  variant erythrocyte surface antigen-1, beta subuni...    25   6.4  

>EAY08687.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 26.6 bits (57), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 12/36 (33%), Positives = 18/36 (50%)

Query: 173 FLAPEFIAPEYEPDYKADNWSLGIILAYFLTGEIPF 208
           +  PE +      DY  D WS+G +LA  +  + PF
Sbjct: 213 YKGPELLVDMRYYDYSLDIWSIGCMLAGIIFKKEPF 248



>EAY08687.1 on XP_001610720  variant erythrocyte surface antigen-1, beta subunit 
            (Establishment)  [Babesia bovis]
          Length = 1102

 Score = 25.4 bits (54), Expect = 6.4,   Method: Composition-based stats.
 Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 7/70 (10%)

Query: 13   YKRPLGRG-----HLGSSYVLQNNKGSYVYCKEILKESIGNKEQVQKFKERIERIRSLNQ 67
            YK   G G     H G   VL    G+   C + L E++ N E   +FK+ I  I  L  
Sbjct: 975  YKYGFGYGDVEKLHKGPG-VLNGGVGTQKKCHDFL-ETLKNVEGSSEFKKLINEINQLIY 1032

Query: 68   KYILPYFAVL 77
               LP+  VL
Sbjct: 1033 TTRLPWIFVL 1042



>EAY08687.1 on XP_001608664  variant erythrocyte surface antigen-1, beta subunit 
            (Establishment)  [Babesia bovis]
          Length = 1116

 Score = 25.4 bits (54), Expect = 6.4,   Method: Composition-based stats.
 Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 7/70 (10%)

Query: 13   YKRPLGRG-----HLGSSYVLQNNKGSYVYCKEILKESIGNKEQVQKFKERIERIRSLNQ 67
            YK   G G     H G   VL    G+   C + L E++ N E   +FK+ I  I  L  
Sbjct: 989  YKYGFGYGDVEKLHKGPG-VLNGGVGTQKKCHDFL-ETLKNVEGSSEFKKLINEINQLIY 1046

Query: 68   KYILPYFAVL 77
               LP+  VL
Sbjct: 1047 TTRLPWIFVL 1056




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08689.1 hypothetical protein TVAG_079470 [Trichomonas
vaginalis G3]
         (58 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAZ15655  Cathepsin C2  (Protease)  [Toxoplasma gondii]                23   1.3  
XP_804289   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   2.8  
XP_828094  VSG  (Establishment)  [Trypanosoma brucei]                  21   7.6  
XP_811703   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           21   9.2  

>EAY08689.1 on AAZ15655  Cathepsin C2  (Protease)  [Toxoplasma gondii]
          Length = 255

 Score = 23.1 bits (48), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 3/31 (9%)

Query: 16 SEEYDPSEQLADEDARQRVTPESIIMNLFQC 46
          S   +P  +L+D   R+R+TP ++   LF C
Sbjct: 2  SAAVEPRGRLSDGCCRRRLTPAAV---LFLC 29



>EAY08689.1 on XP_804289   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1048

 Score = 21.9 bits (45), Expect = 2.8,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%)

Query: 1   MSTEKIQDCNDSLSSSEEYDPSEQLADEDARQR 33
           + +E+  + ND   SSE YD  +   D +A  R
Sbjct: 833 LQSEESTEFNDVEGSSESYDTPQPEEDGEANDR 865



>EAY08689.1 on XP_828094  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 483

 Score = 20.8 bits (42), Expect = 7.6,   Method: Composition-based stats.
 Identities = 8/23 (34%), Positives = 16/23 (69%)

Query: 10  NDSLSSSEEYDPSEQLADEDARQ 32
           ND++ + EE + + Q A E+A++
Sbjct: 350 NDAIETMEEMEKNAQKAREEAKE 372



>EAY08689.1 on XP_811703   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1043

 Score = 20.8 bits (42), Expect = 9.2,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 4/45 (8%)

Query: 3   TEKIQDCNDSLSSSEEYDPSEQLADEDARQR----VTPESIIMNL 43
           +E + +  D   S+E YD  +   DE+A  R    V+P ++ +++
Sbjct: 829 SEVLTEVADVEGSAESYDTQQPEEDEEADGRSGGSVSPVAVSLSM 873




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08690.1 hypothetical protein TVAG_079480 [Trichomonas
vaginalis G3]
         (108 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CAE53332  SuAT1  (Establishment)  [Theileria annulata]                 24   1.8  
XP_001610497  variant erythrocyte surface antigen-1, alpha subun...    23   3.6  
XP_001611737  variant erythrocyte surface antigen-1, beta subuni...    23   4.5  

>EAY08690.1 on CAE53332  SuAT1  (Establishment)  [Theileria annulata]
          Length = 558

 Score = 24.3 bits (51), Expect = 1.8,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 17/24 (70%)

Query: 70  DVLPPWSDDESFKDLSEQERRKAR 93
           D +P   DD+  +DL+E++R+K +
Sbjct: 186 DEIPSDKDDDEPEDLTEEQRQKIK 209



>EAY08690.1 on XP_001610497  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1315

 Score = 23.5 bits (49), Expect = 3.6,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 20/40 (50%)

Query: 67  FVFDVLPPWSDDESFKDLSEQERRKARAMKFVNLHMQALE 106
           F+ D LP +S   +  +L +QE  KA+       H  ALE
Sbjct: 861 FLEDRLPGFSCRSTMDELDKQEVEKAQNKGKDTSHASALE 900



>EAY08690.1 on XP_001611737  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 1139

 Score = 23.1 bits (48), Expect = 4.5,   Method: Composition-based stats.
 Identities = 8/30 (26%), Positives = 16/30 (53%)

Query: 22  SIKTTMGFFSNCFYFIFFIPSFDPYYYMPN 51
           ++  T+G     +Y+I +I  F  + + PN
Sbjct: 808 TVPRTLGDLFGFYYYIVYIGGFQSWDFKPN 837




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08691.1 hypothetical protein TVAG_079490 [Trichomonas
vaginalis G3]
         (131 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_805359   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   0.56 
XP_816852   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   1.4  
XP_809996   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   1.6  
XP_816855   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   1.8  
XP_810005   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   3.3  
XP_804332   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   3.7  
XP_808396   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   4.2  
XP_815498   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   5.8  

>EAY08691.1 on XP_805359   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 788

 Score = 26.6 bits (57), Expect = 0.56,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 11/82 (13%)

Query: 28  SKDMTIRIWKTIFSSKTPVLDGSFTLHTSEIAAIDCNVKADLCVSVGIDGKIIALQLSNS 87
           S+DM      T ++     L G +T   S +   D ++  +  ++  I+G+ + L +   
Sbjct: 344 SRDM-----GTTWTGTIGALSGVWT--KSRLLFWDLSLHVEALITATIEGRKVMLYIQRG 396

Query: 88  QFTRSNKIETIARPSFVSVVDN 109
            F+  NK    A P F+ V DN
Sbjct: 397 NFSGKNK----ANPLFLWVTDN 414



>EAY08691.1 on XP_816852   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 739

 Score = 25.4 bits (54), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 12/48 (25%), Positives = 24/48 (50%), Gaps = 4/48 (8%)

Query: 62  DCNVKADLCVSVGIDGKIIALQLSNSQFTRSNKIETIARPSFVSVVDN 109
           D ++  +  ++  I+G+ + L +    F+  NK    A P ++ V DN
Sbjct: 371 DLSLHVEALITATIEGRKVMLYIQRGNFSGKNK----ANPLYLWVTDN 414



>EAY08691.1 on XP_809996   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 787

 Score = 25.0 bits (53), Expect = 1.6,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 38/93 (40%), Gaps = 11/93 (11%)

Query: 17  LSCSGEYFATGSKDMTIRIWKTIFSSKTPVLDGSFTLHTSEIAAIDCNVKADLCVSVGID 76
           + C  E     S+DM      T ++     L G +    S+ +  D N+  D  ++  I+
Sbjct: 331 VDCEDEQRVYESRDM-----GTAWTEAIGTLPGVWV--NSQSSFRDLNLHVDALITATIE 383

Query: 77  GKIIALQLSNSQFTRSNKIETIARPSFVSVVDN 109
           G+ + L      F+R    E  A   +V V DN
Sbjct: 384 GRKVMLYTQRGNFSR----EEEANALYVWVTDN 412



>EAY08691.1 on XP_816855   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 754

 Score = 25.0 bits (53), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 12/48 (25%), Positives = 24/48 (50%), Gaps = 4/48 (8%)

Query: 62  DCNVKADLCVSVGIDGKIIALQLSNSQFTRSNKIETIARPSFVSVVDN 109
           D ++  +  ++  I+G+ + L +    F+  NK    A P ++ V DN
Sbjct: 333 DLSLHVEALITATIEGRKVMLYIQRGNFSGKNK----ANPLYLWVTDN 376



>EAY08691.1 on XP_810005   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 776

 Score = 24.3 bits (51), Expect = 3.3,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 40/93 (43%), Gaps = 10/93 (10%)

Query: 17  LSCSGEYFATGSKDMTIRIWKTIFSSKTPVLDGSFTLHTSEIAAIDCNVKADLCVSVGID 76
           + C+ E     S+DM      T ++     L G +    S ++  D +++ D  ++  I+
Sbjct: 335 VDCNDEQKVYESRDM-----GTTWTEAIGTLPGVWVNSRSRVSQ-DVSLRVDALITATIE 388

Query: 77  GKIIALQLSNSQFTRSNKIETIARPSFVSVVDN 109
           G+ + L      F+  NK    A   ++ V DN
Sbjct: 389 GRKVMLYTQRGYFSGGNK----ATALYLWVTDN 417



>EAY08691.1 on XP_804332   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 613

 Score = 23.9 bits (50), Expect = 3.7,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 10/82 (12%)

Query: 28  SKDMTIRIWKTIFSSKTPVLDGSFTLHTSEIAAIDCNVKADLCVSVGIDGKIIALQLSNS 87
           S+DM      T ++     L G +T   SE    D  +  D  ++  I+G+ + L     
Sbjct: 360 SRDM-----GTKWTEAIGTLPGVWTKSQSEDYP-DGGLHVDALITATIEGRKVMLYTQRG 413

Query: 88  QFTRSNKIETIARPSFVSVVDN 109
            F+  NK    A P ++ V DN
Sbjct: 414 NFSGKNK----ANPLYLLVTDN 431



>EAY08691.1 on XP_808396   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 786

 Score = 23.9 bits (50), Expect = 4.2,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 11/93 (11%)

Query: 17  LSCSGEYFATGSKDMTIRIWKTIFSSKTPVLDGSFTLHTSEIAAIDCNVKADLCVSVGID 76
           + C  E     S+DM      T ++     L G +    S+ +  D N+  D  ++  I+
Sbjct: 330 VDCEDEQRVYESRDM-----GTAWTEAIGTLPGVWV--NSQSSFRDLNLHVDALITATIE 382

Query: 77  GKIIALQLSNSQFTRSNKIETIARPSFVSVVDN 109
           G+ + L      F+R    E  A   ++ V DN
Sbjct: 383 GRKVMLYTQRGNFSR----EEEANALYLWVTDN 411



>EAY08691.1 on XP_815498   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 822

 Score = 23.5 bits (49), Expect = 5.8,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 13/106 (12%)

Query: 3   PLFTSRLHLDQITCLSCSGEYF------ATGSKDMTIRIWK-----TIFSSKTPVLDGSF 51
           P +++ L L  +    CSG         A+GS    +  W+     T+ S + P L    
Sbjct: 44  PFYSAVLLLAVVMMCCCSGAASSQDTSPASGSSKGKLFDWRDKNGETVSSLRVPSLV-EM 102

Query: 52  TLHTSEIAAIDCNVKADLCVSVGIDGKIIALQLSNSQFTRSNKIET 97
                 +A   C    + CV  GI  +++ L    S+   +NK++T
Sbjct: 103 NGDVFAVAEAQCTGTGE-CVFTGIASELLTLSDEESKELDTNKLKT 147




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08692.1 hypothetical protein TVAG_079500 [Trichomonas
vaginalis G3]
         (586 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_827707  VSG  (Establishment)  [Trypanosoma brucei]                  28   1.1  
XP_001352170  MSP1  (Invasion)  [Plasmodium falciparum]                27   5.7  
AAL38220  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   26   9.4  
AAL38219  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   26   9.7  
AAL38218  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   26   9.7  
AAL38222  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   26   9.9  
AAL38221  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   26   10.0 

>EAY08692.1 on XP_827707  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 474

 Score = 28.5 bits (62), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 6/41 (14%)

Query: 431 EGGIGDGPKDWNSAFEAYLNLNFRKDSTKITFFIPGDGTHH 471
           E G G+    WN A +  L+  F K++       PGD T+H
Sbjct: 231 ECGTGENSNTWNPALDGALHWEFLKEN------CPGDNTNH 265



>EAY08692.1 on XP_001352170  MSP1  (Invasion)  [Plasmodium falciparum]
          Length = 1720

 Score = 26.6 bits (57), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 6/50 (12%)

Query: 527  DPLKTLLKNMNNTK--VSFITLKECSSTPNLDPLINISDEKLERIYENIL 574
            DPL T+L   N+ K  VS + L   +  PN  PL  IS  ++E+ YENIL
Sbjct: 962  DPL-TVLSISNDLKGIVSLLNLGNKTKVPN--PLT-ISTTEMEKFYENIL 1007



>EAY08692.1 on AAL38220  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2957

 Score = 25.8 bits (55), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 9/92 (9%)

Query: 24   VKNLYIADTYASSSALDYNGIIEELYKLGFHVEVAQNYCDCIAEITSGNYHQVWVICSKG 83
            +KNL I D       + Y+  I+ELYKLG  ++   +    I+ + + N  ++ +   K 
Sbjct: 2349 IKNLDILD----EQIMTYHNSIDELYKLG--IQCDNHLITTISVVVNKNTTKIMIHIKKQ 2402

Query: 84   QEAKPTNVDVCNSIKKRSGEIRGESTDFSHAY 115
            +E       + N I+     I  E+  F   Y
Sbjct: 2403 KEDIQK---INNYIQTNYNIINEEALQFHRLY 2431



>EAY08692.1 on AAL38219  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2969

 Score = 25.8 bits (55), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 9/92 (9%)

Query: 24   VKNLYIADTYASSSALDYNGIIEELYKLGFHVEVAQNYCDCIAEITSGNYHQVWVICSKG 83
            +KNL I D       + Y+  I+ELYKLG  ++   +    I+ + + N  ++ +   K 
Sbjct: 2351 IKNLDILD----EQIMTYHNSIDELYKLG--IQCDNHLITTISVVVNKNTTKIMIHIKKQ 2404

Query: 84   QEAKPTNVDVCNSIKKRSGEIRGESTDFSHAY 115
            +E       + N I+     I  E+  F   Y
Sbjct: 2405 KEDIQK---INNYIQTNYNIINEEALQFHRLY 2433



>EAY08692.1 on AAL38218  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2977

 Score = 25.8 bits (55), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 9/92 (9%)

Query: 24   VKNLYIADTYASSSALDYNGIIEELYKLGFHVEVAQNYCDCIAEITSGNYHQVWVICSKG 83
            +KNL I D       + Y+  I+ELYKLG  ++   +    I+ + + N  ++ +   K 
Sbjct: 2359 IKNLDILD----EQIMTYHNSIDELYKLG--IQCDNHLITTISVVVNKNTTKIMIHIKKQ 2412

Query: 84   QEAKPTNVDVCNSIKKRSGEIRGESTDFSHAY 115
            +E       + N I+     I  E+  F   Y
Sbjct: 2413 KEDIQK---INNYIQTNYNIINEEALQFHRLY 2441



>EAY08692.1 on AAL38222  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2976

 Score = 25.8 bits (55), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 9/92 (9%)

Query: 24   VKNLYIADTYASSSALDYNGIIEELYKLGFHVEVAQNYCDCIAEITSGNYHQVWVICSKG 83
            +KNL I D       + Y+  I+ELYKLG  ++   +    I+ + + N  ++ +   K 
Sbjct: 2362 IKNLDILD----EQIMTYHNSIDELYKLG--IQCDNHLITTISVVVNKNTTKIMIHIKKQ 2415

Query: 84   QEAKPTNVDVCNSIKKRSGEIRGESTDFSHAY 115
            +E       + N I+     I  E+  F   Y
Sbjct: 2416 KEDIQK---INNYIQTNYNIINEEALQFHRLY 2444



>EAY08692.1 on AAL38221  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2965

 Score = 25.8 bits (55), Expect = 10.0,   Method: Compositional matrix adjust.
 Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 9/92 (9%)

Query: 24   VKNLYIADTYASSSALDYNGIIEELYKLGFHVEVAQNYCDCIAEITSGNYHQVWVICSKG 83
            +KNL I D       + Y+  I+ELYKLG  ++   +    I+ + + N  ++ +   K 
Sbjct: 2355 IKNLDILD----EQIMTYHNSIDELYKLG--IQCDNHLITTISVVVNKNTTKIMIHIKKQ 2408

Query: 84   QEAKPTNVDVCNSIKKRSGEIRGESTDFSHAY 115
            +E       + N I+     I  E+  F   Y
Sbjct: 2409 KEDIQK---INNYIQTNYNIINEEALQFHRLY 2437




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08694.1 hypothetical protein TVAG_079520 [Trichomonas
vaginalis G3]
         (415 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001705755  ADI  (Others)  [Giardia duodenalis]                      28   1.1  
XP_805183   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   6.4  
AAW78192  CSP  (Invasion)  [Plasmodium falciparum]                     25   7.8  
AAW78217  CSP  (Invasion)  [Plasmodium falciparum]                     25   8.1  
AAW78178  CSP  (Invasion)  [Plasmodium falciparum]                     25   8.1  
AAW78220  CSP  (Invasion)  [Plasmodium falciparum]                     25   8.2  
XP_812751   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   8.3  
AAW78194  CSP  (Invasion)  [Plasmodium falciparum]                     25   8.5  
AAN87585  CSP  (Invasion)  [Plasmodium falciparum]                     25   8.6  
AAN87582  CSP  (Invasion)  [Plasmodium falciparum]                     25   8.6  
BAD73957  CSP  (Invasion)  [Plasmodium falciparum]                     25   8.8  
AAA63421  CSP  (Invasion)  [Plasmodium falciparum]                     25   8.8  
AAN87583  CSP  (Invasion)  [Plasmodium falciparum]                     25   8.9  
AAW78180  CSP  (Invasion)  [Plasmodium falciparum]                     25   9.0  
AAW78214  CSP  (Invasion)  [Plasmodium falciparum]                     25   9.4  
AAW78203  CSP  (Invasion)  [Plasmodium falciparum]                     25   9.6  
AAW78201  CSP  (Invasion)  [Plasmodium falciparum]                     25   9.6  
AAW78198  CSP  (Invasion)  [Plasmodium falciparum]                     25   9.6  
AAN87581  CSP  (Invasion)  [Plasmodium falciparum]                     25   9.7  
AAW78218  CSP  (Invasion)  [Plasmodium falciparum]                     25   9.8  
AAW78179  CSP  (Invasion)  [Plasmodium falciparum]                     25   9.9  
AAW78204  CSP  (Invasion)  [Plasmodium falciparum]                     25   9.9  
AAW78205  CSP  (Invasion)  [Plasmodium falciparum]                     25   9.9  

>EAY08694.1 on XP_001705755  ADI  (Others)  [Giardia duodenalis]
          Length = 255

 Score = 27.7 bits (60), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 348 ESNNFENEILDKQNRENFQ-KLHETDGKYLPSLNTAMAKEYKLKDAKELST 397
           E++  E E+L  Q   + + +LH T  +  P +   ++ EYK K    LST
Sbjct: 83  EASPAEREVLMDQAMASLKYELHATGARITPKMKYCVSDEYKRKVLSALST 133



>EAY08694.1 on XP_805183   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 231

 Score = 25.4 bits (54), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 37/94 (39%), Gaps = 5/94 (5%)

Query: 64  VSKVKIEFTPKSENTPIPTYEVK----ESQIDLLFPINGIIKDISFTGTMNINSTIVTYQ 119
           V+ V I   P  E+TPIP   VK    E+ + L    N   +     G         T++
Sbjct: 17  VATVSIHKVPTKEDTPIPLMGVKTNDAENAVLLGLSYNKEKRWKLLQGGGKTEELSGTWE 76

Query: 120 VDAHFIDSAILIDSPGNSFIPQNGFKFEKDLIAE 153
            DA +   AI++ +     I  NG    KD   E
Sbjct: 77  TDAKY-QVAIVLQNGKQGSIYVNGKLVCKDAQCE 109



>EAY08694.1 on AAW78192  CSP  (Invasion)  [Plasmodium falciparum]
          Length = 370

 Score = 25.0 bits (53), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 10/83 (12%)

Query: 303 SSVEIEFEMNSIAADINEQSNIEIRITGKQFKWRNMFVLKVN-----ETLESNNFENEIL 357
           S+  +  E+N   A  N  + +E+   GKQ  W   + LK N     E  + NN +NE L
Sbjct: 15  SNTRVLNELNYDNAGTNLYNELEMNYYGKQENW---YSLKKNSRSLGENDDGNNEDNEKL 71

Query: 358 DKQNRENFQKLHETDGKYLPSLN 380
            K   +  ++    DG   P+ N
Sbjct: 72  RKPKHKKLKQ--PADGNPDPNAN 92



>EAY08694.1 on AAW78217  CSP  (Invasion)  [Plasmodium falciparum]
          Length = 370

 Score = 25.0 bits (53), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 10/83 (12%)

Query: 303 SSVEIEFEMNSIAADINEQSNIEIRITGKQFKWRNMFVLKVN-----ETLESNNFENEIL 357
           S+  +  E+N   A  N  + +E+   GKQ  W   + LK N     E  + NN +NE L
Sbjct: 15  SNTRVLNELNYDNAGTNLYNELEMNYYGKQENW---YSLKKNSRSLGENDDGNNEDNEKL 71

Query: 358 DKQNRENFQKLHETDGKYLPSLN 380
            K   +  ++    DG   P+ N
Sbjct: 72  RKPKHKKLKQ--PADGNPDPNAN 92



>EAY08694.1 on AAW78178  CSP  (Invasion)  [Plasmodium falciparum]
          Length = 374

 Score = 25.0 bits (53), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 10/83 (12%)

Query: 303 SSVEIEFEMNSIAADINEQSNIEIRITGKQFKWRNMFVLKVN-----ETLESNNFENEIL 357
           S+  +  E+N   A  N  + +E+   GKQ  W   + LK N     E  + NN +NE L
Sbjct: 15  SNTRVLNELNYDNAGTNLYNELEMNYYGKQENW---YSLKKNSRSLGENDDGNNEDNEKL 71

Query: 358 DKQNRENFQKLHETDGKYLPSLN 380
            K   +  ++    DG   P+ N
Sbjct: 72  RKPKHKKLKQ--PADGNPDPNAN 92



>EAY08694.1 on AAW78220  CSP  (Invasion)  [Plasmodium falciparum]
          Length = 370

 Score = 25.0 bits (53), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 10/83 (12%)

Query: 303 SSVEIEFEMNSIAADINEQSNIEIRITGKQFKWRNMFVLKVN-----ETLESNNFENEIL 357
           S+  +  E+N   A  N  + +E+   GKQ  W   + LK N     E  + NN +NE L
Sbjct: 15  SNTRVLNELNYDNAGTNLYNELEMNYYGKQENW---YSLKKNSRSLGENDDGNNEDNEKL 71

Query: 358 DKQNRENFQKLHETDGKYLPSLN 380
            K   +  ++    DG   P+ N
Sbjct: 72  RKPKHKKLKQ--PADGNPDPNAN 92



>EAY08694.1 on XP_812751   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 952

 Score = 25.4 bits (54), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 10/73 (13%)

Query: 64  VSKVKIEFTPKSENTPIPTYEVKESQID--LLFPIN--------GIIKDISFTGTMNINS 113
           V+ V I   P+S ++PIP   V+ +  D  +LF ++         I +D+   G +++  
Sbjct: 562 VATVSIHEVPRSGSSPIPLMGVRMNDTDSTVLFGLSYTHDKKWLAIPEDVDDAGDVDLWE 621

Query: 114 TIVTYQVDAHFID 126
              TYQV     D
Sbjct: 622 PNKTYQVGLRMDD 634



>EAY08694.1 on AAW78194  CSP  (Invasion)  [Plasmodium falciparum]
          Length = 374

 Score = 25.0 bits (53), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 10/83 (12%)

Query: 303 SSVEIEFEMNSIAADINEQSNIEIRITGKQFKWRNMFVLKVN-----ETLESNNFENEIL 357
           S+  +  E+N   A  N  + +E+   GKQ  W   + LK N     E  + NN +NE L
Sbjct: 15  SNTRVLNELNYDNAGTNLYNELEMNYYGKQENW---YSLKKNSRSLGENDDGNNEDNEKL 71

Query: 358 DKQNRENFQKLHETDGKYLPSLN 380
            K   +  ++    DG   P+ N
Sbjct: 72  RKPKHKKLKQ--PADGNPDPNAN 92



>EAY08694.1 on AAN87585  CSP  (Invasion)  [Plasmodium falciparum]
          Length = 389

 Score = 25.0 bits (53), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 10/83 (12%)

Query: 303 SSVEIEFEMNSIAADINEQSNIEIRITGKQFKWRNMFVLKVN-----ETLESNNFENEIL 357
           S+  +  E+N   A  N  + +E+   GKQ  W   + LK N     E  + NN +NE L
Sbjct: 30  SNTRVLNELNYDNAGTNLYNELEMNYYGKQENW---YSLKKNSRSLGENDDGNNEDNEKL 86

Query: 358 DKQNRENFQKLHETDGKYLPSLN 380
            K   +  ++    DG   P+ N
Sbjct: 87  RKPKHKKLKQ--PADGNPDPNAN 107



>EAY08694.1 on AAN87582  CSP  (Invasion)  [Plasmodium falciparum]
          Length = 397

 Score = 25.0 bits (53), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 10/83 (12%)

Query: 303 SSVEIEFEMNSIAADINEQSNIEIRITGKQFKWRNMFVLKVN-----ETLESNNFENEIL 357
           S+  +  E+N   A  N  + +E+   GKQ  W   + LK N     E  + NN +NE L
Sbjct: 30  SNTRVLNELNYDNAGTNLYNELEMNYYGKQENW---YSLKKNSRSLGENDDGNNEDNEKL 86

Query: 358 DKQNRENFQKLHETDGKYLPSLN 380
            K   +  ++    DG   P+ N
Sbjct: 87  RKPKHKKLKQ--PADGNPDPNAN 107



>EAY08694.1 on BAD73957  CSP  (Invasion)  [Plasmodium falciparum]
          Length = 389

 Score = 25.0 bits (53), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 10/83 (12%)

Query: 303 SSVEIEFEMNSIAADINEQSNIEIRITGKQFKWRNMFVLKVN-----ETLESNNFENEIL 357
           S+  +  E+N   A  N  + +E+   GKQ  W   + LK N     E  + NN +NE L
Sbjct: 30  SNTRVLNELNYDNAGTNLYNELEMNYYGKQENW---YSLKKNSRSLGENDDGNNEDNEKL 86

Query: 358 DKQNRENFQKLHETDGKYLPSLN 380
            K   +  ++    DG   P+ N
Sbjct: 87  RKPKHKKLKQ--PADGNPDPNAN 107



>EAY08694.1 on AAA63421  CSP  (Invasion)  [Plasmodium falciparum]
          Length = 393

 Score = 25.0 bits (53), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 10/83 (12%)

Query: 303 SSVEIEFEMNSIAADINEQSNIEIRITGKQFKWRNMFVLKVN-----ETLESNNFENEIL 357
           S+  +  E+N   A  N  + +E+   GKQ  W   + LK N     E  + NN +NE L
Sbjct: 30  SNTRVLNELNYDNAGTNLYNELEMNYYGKQENW---YSLKKNSRSLGENDDGNNEDNEKL 86

Query: 358 DKQNRENFQKLHETDGKYLPSLN 380
            K   +  ++    DG   P+ N
Sbjct: 87  RKPKHKKLKQ--PADGNPDPNAN 107



>EAY08694.1 on AAN87583  CSP  (Invasion)  [Plasmodium falciparum]
          Length = 397

 Score = 25.0 bits (53), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 10/83 (12%)

Query: 303 SSVEIEFEMNSIAADINEQSNIEIRITGKQFKWRNMFVLKVN-----ETLESNNFENEIL 357
           S+  +  E+N   A  N  + +E+   GKQ  W   + LK N     E  + NN +NE L
Sbjct: 30  SNTRVLNELNYDNAGTNLYNELEMNYYGKQENW---YSLKKNSRSLGENDDGNNEDNEKL 86

Query: 358 DKQNRENFQKLHETDGKYLPSLN 380
            K   +  ++    DG   P+ N
Sbjct: 87  RKPKHKKLKQ--PADGNPDPNAN 107



>EAY08694.1 on AAW78180  CSP  (Invasion)  [Plasmodium falciparum]
          Length = 374

 Score = 25.0 bits (53), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 10/83 (12%)

Query: 303 SSVEIEFEMNSIAADINEQSNIEIRITGKQFKWRNMFVLKVN-----ETLESNNFENEIL 357
           S+  +  E+N   A  N  + +E+   GKQ  W   + LK N     E  + NN +NE L
Sbjct: 15  SNTRVLNELNYDNAGTNLYNELEMNYYGKQENW---YSLKKNSRSLGENDDGNNEDNEKL 71

Query: 358 DKQNRENFQKLHETDGKYLPSLN 380
            K   +  ++    DG   P+ N
Sbjct: 72  RKPKHKKLKQ--PGDGNPDPNAN 92



>EAY08694.1 on AAW78214  CSP  (Invasion)  [Plasmodium falciparum]
          Length = 374

 Score = 25.0 bits (53), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 10/83 (12%)

Query: 303 SSVEIEFEMNSIAADINEQSNIEIRITGKQFKWRNMFVLKVN-----ETLESNNFENEIL 357
           S+  +  E+N   A  N  + +E+   GKQ  W   + LK N     E  + NN +NE L
Sbjct: 15  SNTRVLNELNYDNAGTNLYNELEMNYYGKQENW---YSLKKNSRSLGENDDGNNEDNEKL 71

Query: 358 DKQNRENFQKLHETDGKYLPSLN 380
            K   +  ++    DG   P+ N
Sbjct: 72  RKPKHKKLKQ--PGDGNPDPNAN 92



>EAY08694.1 on AAW78203  CSP  (Invasion)  [Plasmodium falciparum]
          Length = 382

 Score = 25.0 bits (53), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 10/83 (12%)

Query: 303 SSVEIEFEMNSIAADINEQSNIEIRITGKQFKWRNMFVLKVN-----ETLESNNFENEIL 357
           S+  +  E+N   A  N  + +E+   GKQ  W   + LK N     E  + NN +NE L
Sbjct: 15  SNTRVLNELNYDNAGTNLYNELEMNYYGKQENW---YSLKKNSRSLGENDDGNNEDNEKL 71

Query: 358 DKQNRENFQKLHETDGKYLPSLN 380
            K   +  ++    DG   P+ N
Sbjct: 72  RKPKHKKLKQ--PADGNPDPNAN 92



>EAY08694.1 on AAW78201  CSP  (Invasion)  [Plasmodium falciparum]
          Length = 374

 Score = 25.0 bits (53), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 10/83 (12%)

Query: 303 SSVEIEFEMNSIAADINEQSNIEIRITGKQFKWRNMFVLKVN-----ETLESNNFENEIL 357
           S+  +  E+N   A  N  + +E+   GKQ  W   + LK N     E  + NN +NE L
Sbjct: 15  SNTRVLNELNYDNAGTNLYNELEMNYYGKQENW---YSLKKNSRSLGENDDGNNEDNEKL 71

Query: 358 DKQNRENFQKLHETDGKYLPSLN 380
            K   +  ++    DG   P+ N
Sbjct: 72  RKPKHKKLKQ--PGDGNPDPNAN 92



>EAY08694.1 on AAW78198  CSP  (Invasion)  [Plasmodium falciparum]
          Length = 378

 Score = 25.0 bits (53), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 10/83 (12%)

Query: 303 SSVEIEFEMNSIAADINEQSNIEIRITGKQFKWRNMFVLKVN-----ETLESNNFENEIL 357
           S+  +  E+N   A  N  + +E+   GKQ  W   + LK N     E  + NN +NE L
Sbjct: 15  SNTRVLNELNYDNAGTNLYNELEMNYYGKQENW---YSLKKNSRSLGENDDGNNEDNEKL 71

Query: 358 DKQNRENFQKLHETDGKYLPSLN 380
            K   +  ++    DG   P+ N
Sbjct: 72  RKPKHKKLKQ--PGDGNPDPNAN 92



>EAY08694.1 on AAN87581  CSP  (Invasion)  [Plasmodium falciparum]
          Length = 385

 Score = 25.0 bits (53), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 10/83 (12%)

Query: 303 SSVEIEFEMNSIAADINEQSNIEIRITGKQFKWRNMFVLKVN-----ETLESNNFENEIL 357
           S+  +  E+N   A  N  + +E+   GKQ  W   + LK N     E  + NN +NE L
Sbjct: 30  SNTRVLNELNYDNAGTNLYNELEMNYYGKQENW---YSLKKNSRSLGENDDGNNEDNEKL 86

Query: 358 DKQNRENFQKLHETDGKYLPSLN 380
            K   +  ++    DG   P+ N
Sbjct: 87  RKPKHKKLKQ--PADGNPDPNAN 107



>EAY08694.1 on AAW78218  CSP  (Invasion)  [Plasmodium falciparum]
          Length = 370

 Score = 25.0 bits (53), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 10/83 (12%)

Query: 303 SSVEIEFEMNSIAADINEQSNIEIRITGKQFKWRNMFVLKVN-----ETLESNNFENEIL 357
           S+  +  E+N   A  N  + +E+   GKQ  W   + LK N     E  + NN +NE L
Sbjct: 15  SNTRVLNELNYDNAGTNLYNELEMNYYGKQENW---YSLKKNSRSLGENDDGNNEDNEKL 71

Query: 358 DKQNRENFQKLHETDGKYLPSLN 380
            K   +  ++    DG   P+ N
Sbjct: 72  RKPKHKKLKQ--PADGNPDPNAN 92



>EAY08694.1 on AAW78179  CSP  (Invasion)  [Plasmodium falciparum]
          Length = 374

 Score = 25.0 bits (53), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 10/83 (12%)

Query: 303 SSVEIEFEMNSIAADINEQSNIEIRITGKQFKWRNMFVLKVN-----ETLESNNFENEIL 357
           S+  +  E+N   A  N  + +E+   GKQ  W   + LK N     E  + NN +NE L
Sbjct: 15  SNTRVLNELNYDNAGTNLYNELEMNYYGKQENW---YSLKKNSRSLGENDDGNNEDNEKL 71

Query: 358 DKQNRENFQKLHETDGKYLPSLN 380
            K   +  ++    DG   P+ N
Sbjct: 72  RKPKHKKLKQ--PGDGNPDPNAN 92



>EAY08694.1 on AAW78204  CSP  (Invasion)  [Plasmodium falciparum]
          Length = 374

 Score = 25.0 bits (53), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 10/83 (12%)

Query: 303 SSVEIEFEMNSIAADINEQSNIEIRITGKQFKWRNMFVLKVN-----ETLESNNFENEIL 357
           S+  +  E+N   A  N  + +E+   GKQ  W   + LK N     E  + NN +NE L
Sbjct: 15  SNTRVLNELNYDNAGTNLYNELEMNYYGKQENW---YSLKKNSRSLGENDDGNNEDNEKL 71

Query: 358 DKQNRENFQKLHETDGKYLPSLN 380
            K   +  ++    DG   P+ N
Sbjct: 72  RKPKHKKLKQ--PADGNPDPNAN 92



>EAY08694.1 on AAW78205  CSP  (Invasion)  [Plasmodium falciparum]
          Length = 378

 Score = 25.0 bits (53), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 10/83 (12%)

Query: 303 SSVEIEFEMNSIAADINEQSNIEIRITGKQFKWRNMFVLKVN-----ETLESNNFENEIL 357
           S+  +  E+N   A  N  + +E+   GKQ  W   + LK N     E  + NN +NE L
Sbjct: 15  SNTRVLNELNYDNAGTNLYNELEMNYYGKQENW---YSLKKNSRSLGENDDGNNEDNEKL 71

Query: 358 DKQNRENFQKLHETDGKYLPSLN 380
            K   +  ++    DG   P+ N
Sbjct: 72  RKPKHKKLKQ--PADGNPDPNAN 92




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08696.1 hypothetical protein TVAG_079540 [Trichomonas
vaginalis G3]
         (457 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_966305  PfEMP1  (Establishment)  [Plasmodium falciparum]            31   0.14 
XP_001351321  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   1.0  
XP_803397   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.2  
XP_803951   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.7  
XP_807850   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   7.0  
XP_828487  VSG  (Establishment)  [Trypanosoma brucei]                  25   9.8  

>EAY08696.1 on XP_966305  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3954

 Score = 31.2 bits (69), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 42/199 (21%)

Query: 103  DTIDAFDKEVDSDLIDKLTKINENVAIDI---DMKKLDALIEEAITNDK--PIIGLYSIL 157
            D I     E ++ L+D  T   E ++ D    DM +      + + +DK  P  G +  L
Sbjct: 2376 DEIPPHSDEEETSLLDDDTSTQEKMSPDFCPSDMPEKPKTDSDILCDDKKEPKCGNFRTL 2435

Query: 158  QHTKIQLIKKDTVVKMKDMLKMEFENVKK----PNWYID----KLYLQRMINLLEKITDM 209
                    K  T     +++ +E  N +     PN YI     +LYL+ + +L E  TD 
Sbjct: 2436 -------FKTSTSKTKTNLIGLEAHNHRAGRFYPNVYISPRAHQLYLEPLKDLKENNTDK 2488

Query: 210  DESIKA-----------------RDLGTLLSSQSSDSTLEGVRNDILFFSKTYPTYGKVL 252
            +E IKA                 ++  TL  + S+ S  E     +    ++Y  YG ++
Sbjct: 2489 NELIKAFTKCAYNEGKCLYEYYSKNKATLGKNGSALSNDEVKTYTLEAMERSYADYGTIV 2548

Query: 253  PE-----HFAKEKIDPKLV 266
             E     +  K+KIDPK++
Sbjct: 2549 KEDILWDYEDKKKIDPKIM 2567



>EAY08696.1 on XP_001351321  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3467

 Score = 28.5 bits (62), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 14/52 (26%), Positives = 28/52 (53%)

Query: 44   CHFEMREKHNELTGRSLSRIFISINNCKEQPIEYSQIMSALIPAYNKKISEI 95
            C+FE +++  ++    LSR+   I  C+  P   + ++SA  PA  ++ S +
Sbjct: 2851 CNFEGKKRKKDMVTLLLSRLQNEIKTCQNPPPSDANLLSAQNPAQCQESSPV 2902



>EAY08696.1 on XP_803397   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 376

 Score = 26.9 bits (58), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 3/60 (5%)

Query: 60  LSRIFISINNCKEQPIEYSQIMSALIPAYNKKISEIDSS--QYNQDTIDAFDKEVDSDLI 117
            S++ I     ++QP E +    AL+ A   K  EI +S  + N+D +D  +KE+  DL+
Sbjct: 37  ASKVNIPSLGAEKQPTEQAANTGALV-ASESKSEEITASYAKLNEDDLDEQEKEIVHDLV 95



>EAY08696.1 on XP_803951   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 818

 Score = 26.9 bits (58), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 3/59 (5%)

Query: 61  SRIFISINNCKEQPIEYSQIMSALIPAYNKKISEIDSS--QYNQDTIDAFDKEVDSDLI 117
           S++ I     ++QP E +    AL+ A   K  EI +S  + N+D +D  +KE+  DL+
Sbjct: 701 SKVNIPSLGAEKQPTEQAANTGALV-ASESKSEEITASYAKLNEDDLDEQEKEIVHDLV 758



>EAY08696.1 on XP_807850   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 875

 Score = 25.8 bits (55), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 12/42 (28%), Positives = 24/42 (57%)

Query: 126 NVAIDIDMKKLDALIEEAITNDKPIIGLYSILQHTKIQLIKK 167
           N   D +  +L AL E+    ++P +G+ S+L   +++ +KK
Sbjct: 431 NSGTDGNKDELIALYEKKKGGEQPSLGMVSVLLTEQLERVKK 472



>EAY08696.1 on XP_828487  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 356

 Score = 25.0 bits (53), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 13/45 (28%), Positives = 22/45 (48%)

Query: 404 ELSDLFELTRKLVWVPIINNQEEIIKQVKLNKPRSYDKLQSYVTN 448
           E +DL+E   +  WVP  N  EE I +     P   ++++   T+
Sbjct: 124 EAADLYEDVTRKQWVPFANALEEKINEALYGVPWRPEEIKENTTD 168




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08697.1 hypothetical protein TVAG_079550 [Trichomonas
vaginalis G3]
         (143 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001611365  variant erythrocyte surface antigen-1, alpha subun...    23   8.0  

>EAY08697.1 on XP_001611365  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1335

 Score = 23.1 bits (48), Expect = 8.0,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 26/51 (50%), Gaps = 6/51 (11%)

Query: 43  QNEMKEVCKNVDDIVKNFELNNTRNCELYSKLDKYLDTKQFNYLLREITSV 93
           + ++KEV KN+ D ++ +E +   N        + +  K F   ++E+ S+
Sbjct: 801 EKQLKEVLKNIKDEIEQYESDMDDNT------GRIIQEKTFYKAVKELISI 845




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08700.1 chloroplastic iron superoxide dismutase,
putative [Trichomonas vaginalis G3]
         (195 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08701.1 hypothetical protein TVAG_079610 [Trichomonas
vaginalis G3]
         (448 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_815749   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           33   0.032
XP_808156   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.4  
XP_820795   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   4.4  
XP_815318   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   5.3  
XP_001350415  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   8.2  
XP_806299   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   8.6  

>EAY08701.1 on XP_815749   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1053

 Score = 33.1 bits (74), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 36/76 (47%), Gaps = 13/76 (17%)

Query: 309 EEIKEI-EVSSPKQQNIPVPVAEEDLLQPEEEEETTQLERETTSPKFEDSIEEET---PE 364
           EE+ E+ +V  P + N        D  QPEEEEE   +   TTSP    S+  ET   P 
Sbjct: 841 EELTEVADVKGPSESN--------DTPQPEEEEEANDMSDGTTSP-LTASLSMETVTAPA 891

Query: 365 NAEFKEDQNEEFENEN 380
           + E +  Q  E  NEN
Sbjct: 892 DGEHQLQQKVELSNEN 907



>EAY08701.1 on XP_808156   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1058

 Score = 27.3 bits (59), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 4/49 (8%)

Query: 335 QPEEEEETTQLERETTSPKFEDSIEEET---PENAEFKEDQNEEFENEN 380
           QPEEE E      ETTSP    S+  ET   P + E +  Q+ E   EN
Sbjct: 864 QPEEEGEANGRSGETTSP-VGASLSMETAAGPVDGEHQVRQSTELATEN 911



>EAY08701.1 on XP_820795   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 782

 Score = 26.2 bits (56), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 7/98 (7%)

Query: 137 NLGWKLEYPCPTHEQLESLRDQTEI-INSPVKTTKPKQNDENDSDDFTALVKNVLNRHDK 195
           +LGW+        E L  LR  + + +N  V      Q  E + D FT +   +L   DK
Sbjct: 85  SLGWRD----AKGETLSLLRVPSLVEVNGGVFAVAEAQLKEGEGDFFTGIASELLEWTDK 140

Query: 196 VVEKIDT-KLQ-KLFDSSPDLNEETESVVSVQESEQLQ 231
             +++DT KL+ ++ +  P  N    S    QE+   Q
Sbjct: 141 ESKELDTNKLKTQVLEECPAGNNSCASQTGAQEASASQ 178



>EAY08701.1 on XP_815318   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 587

 Score = 25.8 bits (55), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 4/49 (8%)

Query: 335 QPEEEEETTQLERETTSPKFEDSIEEET---PENAEFKEDQNEEFENEN 380
           QPEEE E      ETTSP    S+  ET   P + E +  Q+ E   EN
Sbjct: 393 QPEEEGEANGRSGETTSP-VGASLSMETAAGPVDGEHQVQQSTELATEN 440



>EAY08701.1 on XP_001350415  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3056

 Score = 25.4 bits (54), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 10/19 (52%), Positives = 15/19 (78%)

Query: 193  HDKVVEKIDTKLQKLFDSS 211
            HD+  + ID+KL ++FDSS
Sbjct: 1691 HDEYTKYIDSKLNEIFDSS 1709



>EAY08701.1 on XP_806299   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1047

 Score = 25.4 bits (54), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 2/51 (3%)

Query: 332 DLLQPEEEEETTQLERETTSPKFEDSIEEET--PENAEFKEDQNEEFENEN 380
           D  QPEEE E       TTSP     I E    P + E +  Q+ E   EN
Sbjct: 853 DTEQPEEEGEANDRSDGTTSPVASSLIMETVTGPADGEHQVQQSTELSAEN 903




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08707.1 EF hand family protein [Trichomonas vaginalis
G3]
         (172 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CAC20154  Eimepsin  (Protease)  [Eimeria tenella]                      26   1.4  

>EAY08707.1 on CAC20154  Eimepsin  (Protease)  [Eimeria tenella]
          Length = 255

 Score = 25.8 bits (55), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 14/36 (38%), Positives = 18/36 (50%)

Query: 2   IIEEGGDKTETQVIDLDAELSTYSHYTFSPDEIIGL 37
           I+E GG K   Q I L  E ST+       D ++GL
Sbjct: 182 IVEIGGIKVPNQAIGLAVEESTHPFADLPFDGLVGL 217




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08708.1 hypothetical protein TVAG_079680 [Trichomonas
vaginalis G3]
         (290 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAY44833  MSA-1  (Invasion)  [Babesia bovis]                           26   3.2  

>EAY08708.1 on AAY44833  MSA-1  (Invasion)  [Babesia bovis]
          Length = 273

 Score = 25.8 bits (55), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 12/45 (26%), Positives = 25/45 (55%), Gaps = 3/45 (6%)

Query: 126 TLQDEINEMLVTKKQLEQSLSEQRQYINYQKEQTTENNSLQNQQL 170
            L  E+N +    K+ E+S++E ++Y    K+   + +++ NQ L
Sbjct: 137 ALNKEVNRLFPNAKESEESIAEMKKYF---KKNIYDKDTVSNQGL 178




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08709.1 EF hand family protein [Trichomonas vaginalis
G3]
         (190 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAF14193  SBP3  (Others)  [Babesia bovis]                              29   0.18 
CAB37326  PfSUB2  (Proteases)  [Plasmodium falciparum]                 27   0.66 
P02892  BabR  (Others)  [Babesia bovis]                                23   8.3  
P02891  BabR  (Others)  [Babesia bovis]                                23   9.1  
P02890  BabR  (Others)  [Babesia bovis]                                23   9.4  

>EAY08709.1 on AAF14193  SBP3  (Others)  [Babesia bovis]
          Length = 1089

 Score = 28.9 bits (63), Expect = 0.18,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 32/65 (49%)

Query: 101  KAKFVFNVYDADKSGQISKDELKDVMLQSLGENSSIKLPPQVLDKIINDTFKKMDLDGNG 160
            KA+   N   A++  + +  E K V +Q++ +NS     P  L  +++      D +G G
Sbjct: 975  KAREDLNGMSAEEVAKKAAIEAKHVHMQNVKDNSYYSGVPLTLSNVVHKEGVVWDSNGTG 1034

Query: 161  EISLD 165
            E+ LD
Sbjct: 1035 EVCLD 1039



>EAY08709.1 on CAB37326  PfSUB2  (Proteases)  [Plasmodium falciparum]
          Length = 1342

 Score = 27.3 bits (59), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 4/32 (12%)

Query: 163 SLDEFIASA----KQNPSILNCVSVDVNKIFQ 190
           SLDE I  A    KQNP+I N   +D +KIF+
Sbjct: 174 SLDELIKGAILKLKQNPNIKNKNMLDYDKIFK 205



>EAY08709.1 on P02892  BabR  (Others)  [Babesia bovis]
          Length = 212

 Score = 23.5 bits (49), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 2/28 (7%)

Query: 14  YQALV--EQTHFNKEEVAKLYSTFKDIS 39
           Y+ LV  +++ F+KE++ KLY TF + S
Sbjct: 87  YKELVYDDESEFDKEKLQKLYKTFSEDS 114



>EAY08709.1 on P02891  BabR  (Others)  [Babesia bovis]
          Length = 183

 Score = 23.1 bits (48), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 11/26 (42%), Positives = 19/26 (73%), Gaps = 2/26 (7%)

Query: 14  YQALV--EQTHFNKEEVAKLYSTFKD 37
           Y+ LV  +++ F+KE++ KLY TF +
Sbjct: 87  YKELVYDDESEFDKEKLQKLYKTFSE 112



>EAY08709.1 on P02890  BabR  (Others)  [Babesia bovis]
          Length = 191

 Score = 23.1 bits (48), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 2/28 (7%)

Query: 14  YQALV--EQTHFNKEEVAKLYSTFKDIS 39
           Y+ LV  +++ F+KE++ KLY TF + S
Sbjct: 87  YKELVYDDESEFDKEKLQKLYKTFSEDS 114




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08711.1 hypothetical protein TVAG_079710 [Trichomonas
vaginalis G3]
         (84 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08729.1 TKL family protein kinase [Trichomonas
vaginalis G3]
         (962 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    64   1e-11
XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 28   3.6  

>EAY08729.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 63.9 bits (154), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 57/93 (61%), Gaps = 3/93 (3%)

Query: 230 LIIAIRYIHVQKIIHRDVKAANVLLDNH-YLPKLCDFGISRFFN-RKAMTVGIGTASHMA 287
           L+ A+ Y H Q I+HRD+K  NV++D+   + +L D+G++ F++  +  +V + T  +  
Sbjct: 156 LLKAMNYCHSQGIMHRDIKPHNVMIDHEKKILRLIDWGLAEFYHPEQEYSVRVATRYYKG 215

Query: 288 PELMSTSK-YDIKADVFAFGCTLYEMVEKKNPF 319
           PEL+   + YD   D+++ GC L  ++ KK PF
Sbjct: 216 PELLVDMRYYDYSLDIWSIGCMLAGIIFKKEPF 248



>EAY08729.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 28.1 bits (61), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 634 DPVLDFLLRYARHFVHLDSGELYVQLMYQLTLI-DDFSKDRM 674
           D + D + RY  H  H++ G+ Y++ + Q   I D   KD +
Sbjct: 357 DEIKDIIKRYNFHLKHIEKGKEYIKRITQANNIADKMKKDEL 398




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08742.1 hypothetical protein TVAG_251680 [Trichomonas
vaginalis G3]
         (51 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_812313   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   0.18 
AAQ11891  TRAP  (Invasion)  [Plasmodium falciparum]                    24   0.31 
AAW78169  TRAP  (Invasion)  [Plasmodium falciparum]                    23   0.69 
AAW78171  TRAP  (Invasion)  [Plasmodium falciparum]                    23   0.69 
AAA29771  TRAP  (Invasion)  [Plasmodium falciparum]                    23   0.69 
AAW78153  TRAP  (Invasion)  [Plasmodium falciparum]                    23   0.70 
AAW78134  TRAP  (Invasion)  [Plasmodium falciparum]                    23   0.70 
AAW78163  TRAP  (Invasion)  [Plasmodium falciparum]                    23   0.70 
AAW78164  TRAP  (Invasion)  [Plasmodium falciparum]                    23   0.71 
AAW78172  TRAP  (Invasion)  [Plasmodium falciparum]                    23   0.71 
AAW78131  TRAP  (Invasion)  [Plasmodium falciparum]                    23   0.71 
AAA29770  TRAP  (Invasion)  [Plasmodium falciparum]                    23   0.71 
AAA29777  TRAP  (Invasion)  [Plasmodium falciparum]                    23   0.71 
AAW78157  TRAP  (Invasion)  [Plasmodium falciparum]                    23   0.72 
AAQ11892  TRAP  (Invasion)  [Plasmodium falciparum]                    23   0.74 
AAA29773  TRAP  (Invasion)  [Plasmodium falciparum]                    23   0.75 
AAW78152  TRAP  (Invasion)  [Plasmodium falciparum]                    23   0.76 
AAW78149  TRAP  (Invasion)  [Plasmodium falciparum]                    23   0.79 
AAW78130  TRAP  (Invasion)  [Plasmodium falciparum]                    23   0.80 
AAW78144  TRAP  (Invasion)  [Plasmodium falciparum]                    23   0.80 
AAW78132  TRAP  (Invasion)  [Plasmodium falciparum]                    23   0.81 
AAW78173  TRAP  (Invasion)  [Plasmodium falciparum]                    23   0.86 
AAW78166  TRAP  (Invasion)  [Plasmodium falciparum]                    23   0.87 
AAW78176  TRAP  (Invasion)  [Plasmodium falciparum]                    23   0.90 
AAW78160  TRAP  (Invasion)  [Plasmodium falciparum]                    23   0.90 
AAW78139  TRAP  (Invasion)  [Plasmodium falciparum]                    23   0.93 
AAW78135  TRAP  (Invasion)  [Plasmodium falciparum]                    23   0.94 
AAW78177  TRAP  (Invasion)  [Plasmodium falciparum]                    23   0.95 
AAW78136  TRAP  (Invasion)  [Plasmodium falciparum]                    23   0.95 
AAA29778  TRAP  (Invasion)  [Plasmodium falciparum]                    23   0.96 
AAW78138  TRAP  (Invasion)  [Plasmodium falciparum]                    23   0.96 
AAW78151  TRAP  (Invasion)  [Plasmodium falciparum]                    23   0.96 
AAA29772  TRAP  (Invasion)  [Plasmodium falciparum]                    23   0.96 
AAW78162  TRAP  (Invasion)  [Plasmodium falciparum]                    23   0.98 
AAA29774  TRAP  (Invasion)  [Plasmodium falciparum]                    23   0.99 
AAW78137  TRAP  (Invasion)  [Plasmodium falciparum]                    23   1.0  
AAQ11894  TRAP  (Invasion)  [Plasmodium falciparum]                    23   1.0  
AAW78175  TRAP  (Invasion)  [Plasmodium falciparum]                    23   1.0  
AAQ11895  TRAP  (Invasion)  [Plasmodium falciparum]                    23   1.0  
AAA29776  TRAP  (Invasion)  [Plasmodium falciparum]                    23   1.0  
AAW78154  TRAP  (Invasion)  [Plasmodium falciparum]                    23   1.1  
AAW78167  TRAP  (Invasion)  [Plasmodium falciparum]                    23   1.4  
AAW78156  TRAP  (Invasion)  [Plasmodium falciparum]                    23   1.4  
XP_001351514  PfEMP1  (Establishment)  [Plasmodium falciparum]         22   1.5  
AAW78159  TRAP  (Invasion)  [Plasmodium falciparum]                    22   1.6  
XP_001351515  PfEMP1  (Establishment)  [Plasmodium falciparum]         22   1.6  
AAW78168  TRAP  (Invasion)  [Plasmodium falciparum]                    22   1.6  
AAW78161  TRAP  (Invasion)  [Plasmodium falciparum]                    22   1.6  
AAW78148  TRAP  (Invasion)  [Plasmodium falciparum]                    22   1.6  
AAW78165  TRAP  (Invasion)  [Plasmodium falciparum]                    22   1.7  
AAW78141  TRAP  (Invasion)  [Plasmodium falciparum]                    22   1.7  
AAW78147  TRAP  (Invasion)  [Plasmodium falciparum]                    22   1.7  
AAW78146  TRAP  (Invasion)  [Plasmodium falciparum]                    22   1.7  
AAW78174  TRAP  (Invasion)  [Plasmodium falciparum]                    22   1.7  
AAW78158  TRAP  (Invasion)  [Plasmodium falciparum]                    22   1.8  
AAW78150  TRAP  (Invasion)  [Plasmodium falciparum]                    22   2.2  
AAW78133  TRAP  (Invasion)  [Plasmodium falciparum]                    20   7.4  
AAA29775  TRAP  (Invasion)  [Plasmodium falciparum]                    20   7.6  

>EAY08742.1 on XP_812313   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 920

 Score = 25.0 bits (53), Expect = 0.18,   Method: Composition-based stats.
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 21  TQPRVCQVLPIPQEVLDRHKKQQQPVE 47
           +QP   Q    P+EVL + K + Q +E
Sbjct: 123 SQPLTTQTAKTPEEVLKKSKDETQVLE 149



>EAY08742.1 on AAQ11891  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 559

 Score = 24.3 bits (51), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P +VLD  +KQ  P
Sbjct: 404 LPNDKSDRYIPYSPLPSKVLDNERKQSDP 432



>EAY08742.1 on AAW78169  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 551

 Score = 23.5 bits (49), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P +VLD  +KQ  P
Sbjct: 416 LPNDKSDRYIPYSPLPPKVLDNERKQSDP 444



>EAY08742.1 on AAW78171  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 551

 Score = 23.5 bits (49), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P +VLD  +KQ  P
Sbjct: 416 LPNDKSDRYIPYSPLPPKVLDNERKQSDP 444



>EAY08742.1 on AAA29771  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 559

 Score = 23.5 bits (49), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P +VLD  +KQ  P
Sbjct: 404 LPNDKSDRYIPYSPLPPKVLDNERKQSDP 432



>EAY08742.1 on AAW78153  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 545

 Score = 23.5 bits (49), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P +VLD  +KQ  P
Sbjct: 410 LPNDKSDRYIPYSPLPPKVLDNERKQSDP 438



>EAY08742.1 on AAW78134  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 551

 Score = 23.5 bits (49), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P +VLD  +KQ  P
Sbjct: 416 LPNDKSDRYIPYSPLPPKVLDNERKQSDP 444



>EAY08742.1 on AAW78163  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 565

 Score = 23.5 bits (49), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P +VLD  +KQ  P
Sbjct: 430 LPNDKSDRYIPYSPLPPKVLDNERKQSDP 458



>EAY08742.1 on AAW78164  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 23.5 bits (49), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P +VLD  +KQ  P
Sbjct: 404 LPNDKSDRYIPYSPLPPKVLDNERKQSDP 432



>EAY08742.1 on AAW78172  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 545

 Score = 23.5 bits (49), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P +VLD  +KQ  P
Sbjct: 410 LPNDKSDRYIPYSPLPPKVLDNERKQSDP 438



>EAY08742.1 on AAW78131  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 557

 Score = 23.5 bits (49), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P +VLD  +KQ  P
Sbjct: 422 LPNDKSDRYIPYSPLPPKVLDNERKQSDP 450



>EAY08742.1 on AAA29770  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 559

 Score = 23.5 bits (49), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P +VLD  +KQ  P
Sbjct: 404 LPNDKSDRYIPYSPLPPKVLDNERKQSDP 432



>EAY08742.1 on AAA29777  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 559

 Score = 23.5 bits (49), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P +VLD  +KQ  P
Sbjct: 404 LPNDKSDRYIPYSPLPPKVLDNERKQSDP 432



>EAY08742.1 on AAW78157  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 557

 Score = 23.5 bits (49), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P +VLD  +KQ  P
Sbjct: 422 LPNDKSDRYIPYSPLPPKVLDNERKQSDP 450



>EAY08742.1 on AAQ11892  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 559

 Score = 23.5 bits (49), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P +VLD  +KQ  P
Sbjct: 404 LPNDKSDRYIPYSPLPPKVLDNERKQSDP 432



>EAY08742.1 on AAA29773  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 568

 Score = 23.5 bits (49), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P +VLD  +KQ  P
Sbjct: 413 LPNDKSDRYIPYSPLPPKVLDNERKQSDP 441



>EAY08742.1 on AAW78152  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 542

 Score = 23.5 bits (49), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P +VLD  +KQ  P
Sbjct: 407 LPNDKSDRYIPYSPLPPKVLDNERKQSDP 435



>EAY08742.1 on AAW78149  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 542

 Score = 23.1 bits (48), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P +VLD  +KQ  P
Sbjct: 407 LPNDKSDRYIPYSPLPPKVLDNERKQSDP 435



>EAY08742.1 on AAW78130  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 23.1 bits (48), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P +VLD  +KQ  P
Sbjct: 404 LPNDKSDRYIPYSPLPPKVLDNERKQSDP 432



>EAY08742.1 on AAW78144  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 542

 Score = 23.1 bits (48), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P +VLD  +KQ  P
Sbjct: 407 LPNDKSDRYIPYSPLPPKVLDNERKQSDP 435



>EAY08742.1 on AAW78132  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 23.1 bits (48), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P  VLD  +KQ  P
Sbjct: 404 LPNDKSDRYIPYSPLPPNVLDNERKQSDP 432



>EAY08742.1 on AAW78173  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 545

 Score = 23.1 bits (48), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P  VLD  +KQ  P
Sbjct: 410 LPNDKSDRYIPYSPLPPNVLDNERKQSDP 438



>EAY08742.1 on AAW78166  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 545

 Score = 23.1 bits (48), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P  VLD  +KQ  P
Sbjct: 410 LPNDKSDRYIPYSPLPPNVLDNERKQSDP 438



>EAY08742.1 on AAW78176  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 545

 Score = 23.1 bits (48), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P  VLD  +KQ  P
Sbjct: 410 LPNDKSDRYIPYSPLPPNVLDNERKQSDP 438



>EAY08742.1 on AAW78160  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 557

 Score = 23.1 bits (48), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P  VLD  +KQ  P
Sbjct: 422 LPNNKSDRYIPYSPLPPNVLDNERKQSDP 450



>EAY08742.1 on AAW78139  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 545

 Score = 23.1 bits (48), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P  VLD  +KQ  P
Sbjct: 410 LPNDKSDRYIPYSPLPPNVLDNERKQSDP 438



>EAY08742.1 on AAW78135  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 545

 Score = 23.1 bits (48), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P  VLD  +KQ  P
Sbjct: 410 LPNDKSDRYIPYSPLPPNVLDNERKQSDP 438



>EAY08742.1 on AAW78177  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 23.1 bits (48), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P  VLD  +KQ  P
Sbjct: 404 LPNDKSERYIPYSPLPPNVLDNERKQSDP 432



>EAY08742.1 on AAW78136  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 542

 Score = 23.1 bits (48), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P  VLD  +KQ  P
Sbjct: 407 LPNDKSDRYIPYSPLPPNVLDNERKQSDP 435



>EAY08742.1 on AAA29778  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 562

 Score = 23.1 bits (48), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P  VLD  +KQ  P
Sbjct: 407 LPNDKSDRYIPYSPLPPNVLDNERKQSDP 435



>EAY08742.1 on AAW78138  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 542

 Score = 23.1 bits (48), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P  VLD  +KQ  P
Sbjct: 407 LPNDKSDRYIPYSPLPPNVLDNERKQSDP 435



>EAY08742.1 on AAW78151  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 545

 Score = 23.1 bits (48), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P  VLD  +KQ  P
Sbjct: 410 LPNDKSDRYIPYSPLPPNVLDNERKQSDP 438



>EAY08742.1 on AAA29772  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 565

 Score = 23.1 bits (48), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P  VLD  +KQ  P
Sbjct: 410 LPNDKSDRYIPYSPLPPNVLDNERKQSDP 438



>EAY08742.1 on AAW78162  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 542

 Score = 23.1 bits (48), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P  VLD  +KQ  P
Sbjct: 407 LPNDKSDRYIPYSPLPPNVLDNERKQSDP 435



>EAY08742.1 on AAA29774  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 559

 Score = 23.1 bits (48), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P +VLD  +KQ  P
Sbjct: 404 LPNDKSDRSIPYSPLPPKVLDNERKQSDP 432



>EAY08742.1 on AAW78137  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 545

 Score = 23.1 bits (48), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P  VLD  +KQ  P
Sbjct: 410 LPNDKSDRYIPYSPLPPNVLDNERKQSDP 438



>EAY08742.1 on AAQ11894  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 559

 Score = 23.1 bits (48), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P +VLD  +KQ  P
Sbjct: 404 LPNDKSDRSIPYSPLPPKVLDNERKQSDP 432



>EAY08742.1 on AAW78175  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 542

 Score = 23.1 bits (48), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P  VLD  +KQ  P
Sbjct: 407 LPNDKSDRYIPYSPLPPNVLDNERKQSDP 435



>EAY08742.1 on AAQ11895  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 559

 Score = 23.1 bits (48), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P +VLD  +KQ  P
Sbjct: 404 LPNDKSDRSIPYSPLPPKVLDNERKQSDP 432



>EAY08742.1 on AAA29776  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 559

 Score = 23.1 bits (48), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P +VLD  +KQ  P
Sbjct: 404 LPNDKSDRSIPYSPLPPKVLDNERKQSDP 432



>EAY08742.1 on AAW78154  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 542

 Score = 22.7 bits (47), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P  VLD  +KQ  P
Sbjct: 407 LPNDKSDRYIPYSPLPPNVLDNERKQSDP 435



>EAY08742.1 on AAW78167  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 575

 Score = 22.7 bits (47), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P +VLD  +KQ  P
Sbjct: 440 LPNDKSDRNIPYSPLPPKVLDNERKQSDP 468



>EAY08742.1 on AAW78156  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 581

 Score = 22.7 bits (47), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P +VLD  +KQ  P
Sbjct: 446 LPNDKSDRNIPYSPLPPKVLDNERKQSDP 474



>EAY08742.1 on XP_001351514  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2201

 Score = 22.3 bits (46), Expect = 1.5,   Method: Composition-based stats.
 Identities = 9/27 (33%), Positives = 15/27 (55%)

Query: 20   VTQPRVCQVLPIPQEVLDRHKKQQQPV 46
            VTQP +C  +   +E +D  K ++  V
Sbjct: 1650 VTQPNICPKVETTEETVDEGKCEEDTV 1676



>EAY08742.1 on AAW78159  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 22.3 bits (46), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P +VLD  +KQ  P
Sbjct: 404 LPNDKSDRNIPYSPLPPKVLDNERKQSDP 432



>EAY08742.1 on XP_001351515  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2181

 Score = 22.3 bits (46), Expect = 1.6,   Method: Composition-based stats.
 Identities = 9/27 (33%), Positives = 15/27 (55%)

Query: 20   VTQPRVCQVLPIPQEVLDRHKKQQQPV 46
            VTQP +C  +   +E +D  K ++  V
Sbjct: 1630 VTQPNICPKVETTEETVDEGKCEEDTV 1656



>EAY08742.1 on AAW78168  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 22.3 bits (46), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P +VLD  +KQ  P
Sbjct: 404 LPNDKSDRNIPYSPLPPKVLDNERKQSDP 432



>EAY08742.1 on AAW78161  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 554

 Score = 22.3 bits (46), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P +VLD  +KQ  P
Sbjct: 419 LPNDKSDRNIPYSPLPPKVLDNERKQSDP 447



>EAY08742.1 on AAW78148  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 22.3 bits (46), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P +VLD  +KQ  P
Sbjct: 404 LPNDKSDRNIPYSPLPPKVLDNERKQSDP 432



>EAY08742.1 on AAW78165  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 22.3 bits (46), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 17  LPAVTQPRVCQVLPIPQEVLDRHKKQQQP 45
           LP     R     P+P +VLD  +KQ  P
Sbjct: 404 LPNDKSDRNIPYSPLPPKVLDNERKQSDP 432




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08748.1 dihydrouridine synthase, putative
[Trichomonas vaginalis G3]
         (318 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_815315   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   2.8  
XP_812243   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   2.8  
XP_844691  VSG  (Establishment)  [Trypanosoma brucei]                  25   7.1  

>EAY08748.1 on XP_815315   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 799

 Score = 26.2 bits (56), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 12/41 (29%), Positives = 21/41 (51%)

Query: 40  HGVKVCWTGMLNAHQWSQGSGYQNKFFNTCPEDHPLIAQIA 80
           HG  V +TG     QW  GS  +N+ ++    +  L+A ++
Sbjct: 552 HGDGVTFTGSGAGAQWPVGSQGENQLYHFANYNFTLLATVS 592



>EAY08748.1 on XP_812243   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 802

 Score = 26.2 bits (56), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 12/41 (29%), Positives = 21/41 (51%)

Query: 40  HGVKVCWTGMLNAHQWSQGSGYQNKFFNTCPEDHPLIAQIA 80
           HG  V +TG     QW  GS  +N+ ++    +  L+A ++
Sbjct: 555 HGDGVTFTGSGAGAQWPVGSQGENQLYHFANYNFTLLATVS 595



>EAY08748.1 on XP_844691  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 504

 Score = 25.0 bits (53), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 14/32 (43%), Positives = 17/32 (53%)

Query: 240 AQALLKDPTAFDPTGKKPRKDYALEYLNLSKE 271
           AQ LLK   A D TG     D +  YL L++E
Sbjct: 140 AQKLLKTKAAVDATGYSRAGDSSNIYLELTRE 171




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08752.1 hypothetical protein TVAG_251780 [Trichomonas
vaginalis G3]
         (384 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001349033  PfEMP1  (Establishment)  [Plasmodium falciparum]         33   0.029
XP_001609754  variant erythrocyte surface antigen-1, alpha subun...    27   3.0  
XP_807772   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   7.8  
XP_804613   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   8.3  

>EAY08752.1 on XP_001349033  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2064

 Score = 33.1 bits (74), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 16/42 (38%), Positives = 25/42 (59%)

Query: 28   NSDNEKLRSQLAEYEKFLTMLNVQIEERRQRYDDELAKIKDT 69
            +S+ E  +SQ  +YEKF+T    Q E++  +YD   A+ K T
Sbjct: 1469 DSECETCKSQCGQYEKFITQWKSQWEKQSGKYDKLYAEAKVT 1510



>EAY08752.1 on XP_001609754  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1295

 Score = 26.6 bits (57), Expect = 3.0,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 26/39 (66%)

Query: 178 TLESLEHDVDQYMQDISFQKDKYSSIINEIQNTMKIQDQ 216
           +L+ +  ++ ++ +D S  KD+ S +IN++++ + + ++
Sbjct: 758 SLQQVGSELQKWKKDYSSAKDRISEVINKVRDVLTVLEK 796



>EAY08752.1 on XP_807772   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 852

 Score = 25.0 bits (53), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 13/55 (23%)

Query: 244 KAAIERENNQIDTEIAIYERKYKSLCEIRRENNRKSTQIISRFNKDIVRLQASLE 298
           K+A   +NN  D  IA+YE+K K        N+  S  ++S      VRL A LE
Sbjct: 428 KSAGGEDNNNEDKLIALYEKKKKG-------NDETSHSLLS------VRLTAQLE 469



>EAY08752.1 on XP_804613   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 881

 Score = 25.0 bits (53), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 19/89 (21%), Positives = 40/89 (44%), Gaps = 3/89 (3%)

Query: 166 TEKLNQRRAIKSTLESLEHDVDQYMQDISFQKDKYSSIINEIQNTMKIQDQYFELSKKKI 225
           TE+L + + + +T + ++  V Q    +  QK++ S+  +++   +KI          K 
Sbjct: 460 TEQLQRVKGVLTTWKEVDKRVSQLCTSLIAQKERAST--DDVCGAVKITAGLVGFLSGKF 517

Query: 226 SEEISRRDKFFAKHINTIKAAIERENNQI 254
           SE  + RD++   +    K   E   N +
Sbjct: 518 SEN-TWRDEYLGVNATVTKERAEEVENGV 545




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08765.1 ankyrin repeat protein, putative [Trichomonas
vaginalis G3]
         (154 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001612315  variant erythrocyte surface antigen-1, beta subuni...    25   3.3  
XP_820142   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   8.9  

>EAY08765.1 on XP_001612315  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 1140

 Score = 24.6 bits (52), Expect = 3.3,   Method: Composition-based stats.
 Identities = 12/29 (41%), Positives = 18/29 (62%)

Query: 3   DTLDLVSFIIAHGGDINAQDKSGSTPLHY 31
           DT  L SF+ A G D++  + SGS P+ +
Sbjct: 275 DTSGLGSFMAAMGYDLDRLNGSGSLPVMW 303



>EAY08765.1 on XP_820142   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 861

 Score = 23.1 bits (48), Expect = 8.9,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 22/50 (44%)

Query: 70  FTIYKYLLLHGAHVNKKDQKDKTPLFYAAKHFNSDLLGLLIAHGADKNKK 119
           F  Y + L+  A ++K  ++  TP+       N D   +L+    D  +K
Sbjct: 560 FANYNFTLVATASIDKMPKEGNTPIPLMGVKMNGDENNVLLGLSYDSERK 609




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08768.1 hypothetical protein TVAG_188550 [Trichomonas
vaginalis G3]
         (211 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_821526   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.1  
XP_808791   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   2.2  
XP_001351876  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   2.5  
XP_808582   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   2.9  
CAJ20707  Toxopain-2  (Protease)  [Toxoplasma gondii]                  25   3.7  
XP_807454   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   7.7  
XP_815749   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   9.6  

>EAY08768.1 on XP_821526   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 983

 Score = 26.9 bits (58), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 84  ATPSQQEEIPVKVSIQRPETDLKIPSPHKPKFQGRLLGNLTSLAPIANNILN 135
           A P+     PV+  I   E +  IPS H+   +   LG+L ++A I ++ ++
Sbjct: 913 AAPTHSSTAPVETKIPS-ELNATIPSDHELLLEHGQLGDLAAMALIGDSTVH 963



>EAY08768.1 on XP_808791   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 194

 Score = 25.4 bits (54), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 84  ATPSQQEEIPVKVSIQRPETDLKIPSPHKPKFQGRLLGNLTSLAPIANNILNS 136
           A P+     PV+  I   E +  IPS H+   +   LG+L ++A I ++ ++ 
Sbjct: 123 AAPTHSSTAPVETKIP-SELNATIPSDHELLLEHGQLGDLAAMALIGDSTVHG 174



>EAY08768.1 on XP_001351876  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3164

 Score = 25.8 bits (55), Expect = 2.5,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 22/45 (48%)

Query: 157  IPQIDSTNGIQQIPAPRIPNRKIEQQAEMFQNQDMANLPEASHQK 201
            I + +S    ++IPAP+IP   +E+ A     +   N+     QK
Sbjct: 2441 ISKNESKTHTKKIPAPKIPMNCVEKAAYYLSKEAENNIERTLKQK 2485




 Score = 25.0 bits (53), Expect = 4.5,   Method: Composition-based stats.
 Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)

Query: 26   EEENNVVPNRPPPQQVNQPPANIYNEKKTKK 56
            +EE    P +PP ++V QPP  I    +T +
Sbjct: 2015 KEEKTARPTKPP-KKVEQPPTGIRAPTRTPR 2044



>EAY08768.1 on XP_808582   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 786

 Score = 25.4 bits (54), Expect = 2.9,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 2/75 (2%)

Query: 126 LAPIANNILNSDKSIPTNVPERKRAFQPQNNIPQIDSTNGIQQIPAPRIPNRKIEQQAEM 185
           L P     +   K +P   PE +    PQ   P   +  G +++PA   P R    +   
Sbjct: 677 LNPTEMTAIKDRKPVPKRAPEPQVGGVPQTIAPAGPAVPGPREVPAA--PGRTTVGRTAN 734

Query: 186 FQNQDMANLPEASHQ 200
            Q+    +L  A ++
Sbjct: 735 TQHAPAGSLTSAGNE 749



>EAY08768.1 on CAJ20707  Toxopain-2  (Protease)  [Toxoplasma gondii]
          Length = 255

 Score = 25.0 bits (53), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 2/31 (6%)

Query: 23  IEPEEENNVVPNRPPPQQVNQPPANIYNEKK 53
            + E++  V P  P P + +QPPANI+  K+
Sbjct: 82  WQGEDDRAVFP--PSPVEDHQPPANIWEWKE 110



>EAY08768.1 on XP_807454   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 825

 Score = 24.3 bits (51), Expect = 7.7,   Method: Composition-based stats.
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 131 NNILNSDK--SIPTNVPERKRAFQPQNNIPQIDSTNGIQQIPAPR 173
           N  LNS +  +I    P  KRA +PQ  I  I     +  +P PR
Sbjct: 712 NRPLNSTEMIAIKDRKPVPKRAPEPQVKIAPIPIAPTVSAVPGPR 756



>EAY08768.1 on XP_815749   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1053

 Score = 23.9 bits (50), Expect = 9.6,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 18/32 (56%)

Query: 11  EPAPKQIIELEDIEPEEENNVVPNRPPPQQVN 42
           +P P+++ E+ D++   E+N  P     ++ N
Sbjct: 837 DPQPEELTEVADVKGPSESNDTPQPEEEEEAN 868




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08779.1 hypothetical protein TVAG_188660 [Trichomonas
vaginalis G3]
         (745 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08780.1 hypothetical protein TVAG_188670 [Trichomonas
vaginalis G3]
         (719 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_808957   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   5.2  
XP_820186   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   6.5  
XP_820135   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   7.2  

>EAY08780.1 on XP_808957   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1446

 Score = 26.9 bits (58), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)

Query: 19  NSQQKKADESNQKTKEDKKDSSKSKIKSKKQQNTKPKQVKKKQQKPKHPKSNEERLPAED 78
           +++ K A+  + + K  +  S++ K    K    KP + K  + KP  PKS E + PAE 
Sbjct: 899 SAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAGPKPAEPKSAEPKPAEPKSAEPK-PAEP 957

Query: 79  ITA 81
            +A
Sbjct: 958 KSA 960




 Score = 26.9 bits (58), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%)

Query: 19   NSQQKKADESNQKTKEDKKDSSKSKIKSKKQQNTKPKQVKKKQQKPKHPKSNEERLPAED 78
            +++ K A+  + + +  K  S+  K    K    KP + K  + KP  PKS E + PAE 
Sbjct: 1109 SAEPKPAEPKSAEPEPTKPKSAGPKPAEPKSAGPKPAEPKSAEPKPAEPKSAEPK-PAEP 1167

Query: 79   ITA 81
             +A
Sbjct: 1168 KSA 1170




 Score = 26.2 bits (56), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%)

Query: 19  NSQQKKADESNQKTKEDKKDSSKSKIKSKKQQNTKPKQVKKKQQKPKHPKSNEERLPAED 78
           ++  K A+  + + K  +  S++ K    K    KP + K  + KP  PKS E + PAE 
Sbjct: 769 SAGPKPAEPKSAEPKPAEPKSAEPKPAEPKSAGPKPAEPKSAEPKPAEPKSAEPK-PAEP 827

Query: 79  ITA 81
            +A
Sbjct: 828 KSA 830



>EAY08780.1 on XP_820186   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1133

 Score = 26.6 bits (57), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)

Query: 19  NSQQKKADESNQKTKEDKKDSSKSKIKSKKQQNTKPKQVKKKQQKPKHPKSNEERLPAED 78
           +++ K A+  + + K  +  S++ K    K    KP + K  + KP  PKS E + PAE 
Sbjct: 859 SAEPKPAEPKSAEPKPAEPKSAEPKPAESKSAGPKPAEPKSAEPKPAEPKSAEPK-PAEP 917

Query: 79  ITA 81
            +A
Sbjct: 918 KSA 920




 Score = 26.6 bits (57), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)

Query: 19  NSQQKKADESNQKTKEDKKDSSKSKIKSKKQQNTKPKQVKKKQQKPKHPKSNEERLPAED 78
           +++ K A+  + + K  + +S++ K    K    KP + K  + KP  PKS E + PAE 
Sbjct: 919 SAEPKPAEPKSAEPKPAEPNSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPK-PAEP 977

Query: 79  ITA 81
            +A
Sbjct: 978 KSA 980




 Score = 25.8 bits (55), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)

Query: 19  NSQQKKADESNQKTKEDKKDSSKSKIKSKKQQNTKPKQVKKKQQKPKHPKSNEERLPAED 78
           +++ K A+ ++ + K  +  S++ K    K    KP + K  + KP  PKS E + PAE 
Sbjct: 929 SAEPKPAEPNSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPK-PAEP 987

Query: 79  ITA 81
            +A
Sbjct: 988 KSA 990



>EAY08780.1 on XP_820135   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1519

 Score = 26.6 bits (57), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 19/71 (26%), Positives = 35/71 (49%)

Query: 3    KNGEFFDDLKRIFDVLNSQQKKADESNQKTKEDKKDSSKSKIKSKKQQNTKPKQVKKKQQ 62
            K+ EF     +  +  +++ K A+  + + K  ++ S++SK    K    KP + K  + 
Sbjct: 1269 KSAEFKPAEPKPAEPKSAEPKPAEPKSAEPKPAEQKSAESKPAEPKPAEPKPAEPKPAEP 1328

Query: 63   KPKHPKSNEER 73
            KP  PKS E +
Sbjct: 1329 KPAEPKSAEPK 1339




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08783.1 TLD family protein [Trichomonas vaginalis G3]
         (560 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_818883   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   4.3  
XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]                 26   9.8  

>EAY08783.1 on XP_818883   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 980

 Score = 26.6 bits (57), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)

Query: 319 ETAITSDEKPIEELN--YFNAYKSYPDFLDKSPAYNSGGIKSWRSSMGIELMSSLSP 373
           E  +T++ +P    N    +   S+P  L  S +  +G +K    S  +EL+S+LSP
Sbjct: 757 EPVVTNEAQPSGNANGPAVSRETSFPSVLGVSTSAAAGEVKGEAPSSSVELLSTLSP 813



>EAY08783.1 on XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]
          Length = 2112

 Score = 25.8 bits (55), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 19/89 (21%)

Query: 13  NSTDSYGFYEHSSFIPDREWEAE---------ENLRLQNFQKVPTYIPKFNDKIKKLIRY 63
           N+ D     + S+ I    WE E          NL +   +KV   I  F+DKI++ I+Y
Sbjct: 844 NTYDLTLIIDESASIGYSNWEKEVVPFTIGLASNLEISE-KKVNMGILLFSDKIREFIKY 902

Query: 64  GVPLNYRRNFWFQ---------ASGAFDY 83
           G   +Y +N   +          SG F Y
Sbjct: 903 GQKESYDKNNLVRRIHDLKKYYKSGGFSY 931




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08792.1 Beige/BEACH domain containing protein
[Trichomonas vaginalis G3]
         (2398 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAL38219  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   32   0.82 
AAL38222  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   32   0.82 
AAL38221  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   32   0.84 
AAL38218  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   32   0.84 
AAL38220  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   31   0.86 
XP_001348153  MAEBL  (Adhesin)  [Plasmodium falciparum]                28   6.9  

>EAY08792.1 on AAL38219  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2969

 Score = 31.6 bits (70), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 17/107 (15%)

Query: 1737 IKTAKSTISFEKEEVQAIYLRTFLQKPTALEIFLDYVSYFLNFD------ISVLNNVFKY 1790
            IKT+K+ I+  KE+ Q  ++   L    AL++F+D  S   N D       S+ NN+  Y
Sbjct: 1768 IKTSKTKINMLKEQSQMKHIDKTLLNEQALKLFVDINSTNNNLDNMLSEINSIQNNIHTY 1827

Query: 1791 FE---------KVIPRNVVDNKLPKVVFSSLDFTD--KWISGEITNF 1826
             +         K+I    V++ L K+    L++ +  K +  EI N 
Sbjct: 1828 IQEANKSFDKFKIICDQNVNDLLNKLSLGDLNYMNHLKNLQNEIRNM 1874



>EAY08792.1 on AAL38222  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2976

 Score = 31.6 bits (70), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 17/107 (15%)

Query: 1737 IKTAKSTISFEKEEVQAIYLRTFLQKPTALEIFLDYVSYFLNFD------ISVLNNVFKY 1790
            IKT+K+ I+  KE+ Q  ++   L    AL++F+D  S   N D       S+ NN+  Y
Sbjct: 1779 IKTSKTKINMLKEQSQMKHIDKTLLNEQALKLFVDINSTNNNLDNMLSEINSIQNNIHTY 1838

Query: 1791 FE---------KVIPRNVVDNKLPKVVFSSLDFTD--KWISGEITNF 1826
             +         K+I    V++ L K+    L++ +  K +  EI N 
Sbjct: 1839 IQEANKSFDKFKIICDQNVNDLLNKLSLGDLNYMNHLKNLQNEIRNM 1885



>EAY08792.1 on AAL38221  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2965

 Score = 31.6 bits (70), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 17/107 (15%)

Query: 1737 IKTAKSTISFEKEEVQAIYLRTFLQKPTALEIFLDYVSYFLNFD------ISVLNNVFKY 1790
            IKT+K+ I+  KE+ Q  ++   L    AL++F+D  S   N D       S+ NN+  Y
Sbjct: 1772 IKTSKTKINMLKEQSQMKHIDKTLLNEQALKLFVDINSTNNNLDNMLSEINSIQNNIHTY 1831

Query: 1791 FE---------KVIPRNVVDNKLPKVVFSSLDFTD--KWISGEITNF 1826
             +         K+I    V++ L K+    L++ +  K +  EI N 
Sbjct: 1832 IQEANKSFDKFKIICDQNVNDLLNKLSLGDLNYMNHLKNLQNEIRNM 1878



>EAY08792.1 on AAL38218  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2977

 Score = 31.6 bits (70), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 17/107 (15%)

Query: 1737 IKTAKSTISFEKEEVQAIYLRTFLQKPTALEIFLDYVSYFLNFD------ISVLNNVFKY 1790
            IKT+K+ I+  KE+ Q  ++   L    AL++F+D  S   N D       S+ NN+  Y
Sbjct: 1776 IKTSKTKINMLKEQSQMKHIDKTLLNEQALKLFVDINSTNNNLDNMLSEINSIQNNIHTY 1835

Query: 1791 FE---------KVIPRNVVDNKLPKVVFSSLDFTD--KWISGEITNF 1826
             +         K+I    V++ L K+    L++ +  K +  EI N 
Sbjct: 1836 IQEANKSFDKFKIICDQNVNDLLNKLSLGDLNYMNHLKNLQNEIRNM 1882



>EAY08792.1 on AAL38220  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2957

 Score = 31.2 bits (69), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 17/107 (15%)

Query: 1737 IKTAKSTISFEKEEVQAIYLRTFLQKPTALEIFLDYVSYFLNFD------ISVLNNVFKY 1790
            IKT+K+ I+  KE+ Q  ++   L    AL++F+D  S   N D       S+ NN+  Y
Sbjct: 1766 IKTSKTKINMLKEQSQMKHIDKTLLNEQALKLFVDINSTNNNLDNMLSEINSIQNNIHTY 1825

Query: 1791 FE---------KVIPRNVVDNKLPKVVFSSLDFTD--KWISGEITNF 1826
             +         K+I    V++ L K+    L++ +  K +  EI N 
Sbjct: 1826 IQEANKSFDKFKIICDQNVNDLLNKLSLGDLNYMNHLKNLQNEIRNM 1872



>EAY08792.1 on XP_001348153  MAEBL  (Adhesin)  [Plasmodium falciparum]
          Length = 2054

 Score = 28.5 bits (62), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 14/41 (34%), Positives = 27/41 (65%), Gaps = 1/41 (2%)

Query: 1557 QEDIVNKNMQMTKADEFIDGYYAENSKTFDSFQDLTKSYEI 1597
            +E ++ KNMQ+ +AD F + + +ENSK+ +   D +K  ++
Sbjct: 1809 KEVVITKNMQLNEADAF-EKHNSENSKSSNKNADFSKEKDL 1848




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08802.1 hypothetical protein TVAG_213110 [Trichomonas
vaginalis G3]
         (580 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_819490   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   8.2  
XP_828105  VSG  (Establishment)  [Trypanosoma brucei]                  26   8.8  

>EAY08802.1 on XP_819490   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 997

 Score = 25.8 bits (55), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 12/22 (54%), Positives = 15/22 (68%)

Query: 112 PESSDSSKKSSSGRFLSPTNEE 133
           PE+SD++  SS GR L  T EE
Sbjct: 811 PEASDAAAVSSGGRGLHGTREE 832



>EAY08802.1 on XP_828105  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 508

 Score = 25.8 bits (55), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 52/123 (42%), Gaps = 28/123 (22%)

Query: 328 DDAIKNAKADLNERLATADVSEVFDVEDQISEVQTEMEQKKHAFESHLARMDA--EAALQ 385
           DD I N+ AD+N  LA  +   +F  E Q  + Q ++   KHA  +   +M A    A Q
Sbjct: 57  DDKIYNSIADINMTLAEKEWRAMFLQEGQAEKWQLKLPT-KHAENAAFQKMWALWACAAQ 115

Query: 386 KKELQLKLDDDLDAIDSEWTSPSKSKKFSRVSAKLQNMRKEAMTLLNAKRYEEAERVNQI 445
           +   +  L D L           K  K + ++A   ++R+              +RV QI
Sbjct: 116 RVGSERGLTDKL-----------KKLKANELTATDLSLRR--------------QRVQQI 150

Query: 446 ADK 448
           ADK
Sbjct: 151 ADK 153




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08803.1 viral A-type inclusion protein, putative
[Trichomonas vaginalis G3]
         (1478 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001610567  variant erythrocyte surface antigen-1, alpha subun...    30   0.91 
XP_001611365  variant erythrocyte surface antigen-1, alpha subun...    30   1.3  
XP_819737   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   1.7  
XP_001610721  variant erythrocyte surface antigen-1, alpha subun...    29   3.1  
XP_806989   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   7.3  

>EAY08803.1 on XP_001610567  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1315

 Score = 30.4 bits (67), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 21/38 (55%)

Query: 754 NELSNTIKSERDENHTRKSKLNDEINQLKQKLIDQKKE 791
           NELSN IK  RD     K +L D+ + L  KL D  +E
Sbjct: 780 NELSNAIKGVRDALEALKEELKDDKSPLYGKLPDWVRE 817



>EAY08803.1 on XP_001611365  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1335

 Score = 30.0 bits (66), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 11/113 (9%)

Query: 679 LKDLEGKLNDA--NKQIDQEKSKNTDFQRKMSELQNNFEKD-KMKFQNEIDKLENMNHNI 735
           LKDLEGKL+ A   K++D  K++ +    K+ E+    EK  K   +N  D++E    ++
Sbjct: 763 LKDLEGKLDTATGGKEVDPGKNEVSKAIHKVWEVLKEMEKQLKEVLKNIKDEIEQYESDM 822

Query: 736 DDKVRSIQKENEKLKI--ENNELSNTIKSERDENHTRK------SKLNDEINQ 780
           DD    I +E    K   E   + N+ K    ++H+ K      SK  D+ +Q
Sbjct: 823 DDNTGRIIQEKTFYKAVKELISICNSPKCPSCKSHSNKCGRQPQSKYCDKCHQ 875



>EAY08803.1 on XP_819737   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1112

 Score = 29.6 bits (65), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 12/34 (35%), Positives = 20/34 (58%)

Query: 866 DLNLEKNKTYKMQVKMDMEQVSTEQLKQKLKDTE 899
           D   E NKTY++ ++MD E+ S     +++  TE
Sbjct: 688 DFEWEPNKTYQVGLRMDFEEWSVFVDGREIHSTE 721



>EAY08803.1 on XP_001610721  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1331

 Score = 28.9 bits (63), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 5/64 (7%)

Query: 981  LKNNNKNLSQEISSLKDQVNSANSKIRN-LTSENDKLKSDNSRLNNEVNEWKLQSQTSEV 1039
            + N+ +   ++ SS KD+++ A SK+R+ L +  ++LK  NS L   + +W     T++ 
Sbjct: 777  ISNSGQEWEKDYSSAKDRISEAISKVRDALEALKNELKDKNSMLKGGLADWA----TAKF 832

Query: 1040 QSTI 1043
            Q  I
Sbjct: 833  QQAI 836



>EAY08803.1 on XP_806989   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 922

 Score = 27.3 bits (59), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 8/46 (17%)

Query: 536 ENENYKVTIKELQEKLVESQKLTENQKFDHENEKKITDQYLEKQRG 581
           E +NY +T  +L EKL E +K+    K     EK   D Y+ ++ G
Sbjct: 413 EGDNYNITFVDLTEKLEEMKKVVAAWK-----EK---DAYIAREHG 450




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08814.1 hypothetical protein TVAG_213230 [Trichomonas
vaginalis G3]
         (528 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_812615   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.53 
XP_807593   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   0.80 
XP_813615   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   0.87 
XP_807308   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   1.0  
XP_812082   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   1.2  
XP_815267   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   1.3  
XP_812751   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   1.6  
XP_804124   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   5.3  
XP_803882   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   5.4  
XP_815630   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   5.6  
XP_815234   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   7.8  
XP_812850   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   7.8  
XP_807074   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   8.0  

>EAY08814.1 on XP_812615   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1116

 Score = 29.6 bits (65), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 4/57 (7%)

Query: 142 LCLRIDDLIQACFNKDDRDMADNAYSILLTFD-HKITHHFIRADRFQQ--LGSDLTI 195
           + LR+DD  +  F  D R++  N Y+  L FD H+I+H +I  D   Q   G  +T+
Sbjct: 703 VGLRMDDDDEWTFFVDQREIDRNRYNTSL-FDFHRISHFYIGGDSKDQSATGGHVTV 758



>EAY08814.1 on XP_807593   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 715

 Score = 28.9 bits (63), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 11/25 (44%), Positives = 17/25 (68%)

Query: 114 PNVPLKAVLPTKAAMKLFQNGNSTI 138
           PNVP  A+ P  + ++LF+  NST+
Sbjct: 19  PNVPAHALAPESSRIELFKRKNSTV 43



>EAY08814.1 on XP_813615   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 706

 Score = 28.9 bits (63), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 11/25 (44%), Positives = 17/25 (68%)

Query: 114 PNVPLKAVLPTKAAMKLFQNGNSTI 138
           PNVP  A+ P  + ++LF+  NST+
Sbjct: 19  PNVPAHALAPGSSRIELFKRKNSTV 43



>EAY08814.1 on XP_807308   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 717

 Score = 28.5 bits (62), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 11/25 (44%), Positives = 17/25 (68%)

Query: 114 PNVPLKAVLPTKAAMKLFQNGNSTI 138
           PNVP  A+ P  + ++LF+  NST+
Sbjct: 19  PNVPAHALAPESSRIELFKRKNSTV 43



>EAY08814.1 on XP_812082   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 554

 Score = 28.1 bits (61), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 11/25 (44%), Positives = 17/25 (68%)

Query: 114 PNVPLKAVLPTKAAMKLFQNGNSTI 138
           PNVP  A+ P  + ++LF+  NST+
Sbjct: 19  PNVPAHALAPESSRIELFKRRNSTV 43



>EAY08814.1 on XP_815267   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 718

 Score = 28.1 bits (61), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 11/25 (44%), Positives = 17/25 (68%)

Query: 114 PNVPLKAVLPTKAAMKLFQNGNSTI 138
           PNVP  A+ P  + ++LF+  NST+
Sbjct: 19  PNVPAHALAPESSRIELFKRRNSTV 43



>EAY08814.1 on XP_812751   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 952

 Score = 28.1 bits (61), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 5/57 (8%)

Query: 142 LCLRIDDLIQACFNKDDRDMADNAYSILLTFD-HKITHHFIRADRFQQ--LGSDLTI 195
           + LR+DD     F  D R++  N Y+  L FD H+I+H +I  D   Q   G  +T+
Sbjct: 628 VGLRMDDKEWTVF-VDQREIDRNRYNTSL-FDFHRISHFYIGGDSKHQSATGGHVTV 682



>EAY08814.1 on XP_804124   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 272

 Score = 25.8 bits (55), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 114 PNVPLKAVLPTKAAMKLFQNGNSTI 138
           PN P  A+ P  + ++LF+  NST+
Sbjct: 26  PNEPAHALAPGSSRVELFKRQNSTV 50



>EAY08814.1 on XP_803882   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 203

 Score = 25.8 bits (55), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 114 PNVPLKAVLPTKAAMKLFQNGNSTI 138
           PN P  A+ P  + ++LF+  NST+
Sbjct: 26  PNEPAHALAPGSSRVELFKRQNSTV 50



>EAY08814.1 on XP_815630   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 202

 Score = 25.8 bits (55), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 114 PNVPLKAVLPTKAAMKLFQNGNSTI 138
           PN P  A+ P  + ++LF+  NST+
Sbjct: 26  PNEPAHALAPGSSRVELFKRQNSTV 50



>EAY08814.1 on XP_815234   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1032

 Score = 25.8 bits (55), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 18/90 (20%)

Query: 437 KKKIVVNIVQMIIPALMGMLSDDYNIGIKGTL---------CE--IFGAIEMERKYNNVL 485
           K +I+ N  ++ +PA       D N G +            C+  +F  +  +R Y+   
Sbjct: 613 KWRIIFNGSRLTLPA------HDENAGWEANKKYHVALQMDCDDGLFVYVNGKRIYDREF 666

Query: 486 DQELNNVQNYKDFYD-SRVVLRSYLISSSY 514
           D E  + + YK FYD S+ +L S+ IS  Y
Sbjct: 667 DYEDEDYEGYKSFYDRSQKLLSSHSISHFY 696



>EAY08814.1 on XP_812850   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1032

 Score = 25.8 bits (55), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 18/90 (20%)

Query: 437 KKKIVVNIVQMIIPALMGMLSDDYNIGIKGTL---------CE--IFGAIEMERKYNNVL 485
           K +I+ N  ++ +PA       D N G +            C+  +F  +  +R Y+   
Sbjct: 613 KWRIIFNGSRLTLPA------HDENAGWEANKKYHVALQMDCDDGLFVYVNGKRIYDREF 666

Query: 486 DQELNNVQNYKDFYD-SRVVLRSYLISSSY 514
           D E  + + YK FYD S+ +L S+ IS  Y
Sbjct: 667 DYEDEDYEGYKSFYDRSQKLLSSHSISHFY 696



>EAY08814.1 on XP_807074   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 822

 Score = 25.8 bits (55), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 114 PNVPLKAVLPTKAAMKLFQNGNSTI 138
           PN P  A+ P  + ++LF+  NST+
Sbjct: 26  PNEPAHALAPGSSRVELFKRQNSTV 50




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08823.1 AGC family protein kinase [Trichomonas
vaginalis G3]
         (573 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    54   9e-09
XP_815845   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           33   0.051

>EAY08823.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 53.9 bits (128), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 18/162 (11%)

Query: 67  LQSIPPHKHIIKLFDVSYDQNRFIINFLFELAPQTAINILSKRNMTREEILIFFAAICEA 126
           LQ++    +IIKL D+  D      + +FE    T    L    +T ++I  +   + +A
Sbjct: 101 LQNLRGGPNIIKLLDIVKDPQSRTPSLIFEHVNNTDFKTLYP-TLTIQDIKYYIYQLLKA 159

Query: 127 TAFLHAQNPPIIHRDLKPENLLVASD-GIPRLCDFGSATTKIYQVANVKEINEASDDIEQ 185
             + H+Q   I+HRD+KP N+++  +  I RL D+G A  + Y       +  A      
Sbjct: 160 MNYCHSQG--IMHRDIKPHNVMIDHEKKILRLIDWGLA--EFYHPEQEYSVRVA------ 209

Query: 186 NTTPNFRAPE-MVDLYKRVPIGPAADVWALGCTLYKLVFRQD 226
             T  ++ PE +VD+        + D+W++GC L  ++F+++
Sbjct: 210 --TRYYKGPELLVDMRY---YDYSLDIWSIGCMLAGIIFKKE 246



>EAY08823.1 on XP_815845   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 936

 Score = 33.1 bits (74), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 8/83 (9%)

Query: 106 LSKRNMTREEILIFFAAICEATAFLHAQ-------NPPIIHRDLK-PENLLVASDGIPRL 157
           +S+R  T   +L+F   +C  +  + AQ       +P    +D+K  E + V S G+P L
Sbjct: 39  MSRRVFTSAALLLFVVMMCCCSGTVTAQAVEQESIDPNYKWKDVKDEEGVTVESLGVPGL 98

Query: 158 CDFGSATTKIYQVANVKEINEAS 180
              GS    + +  N K+  + S
Sbjct: 99  LKVGSDVFAVAEAKNTKKEGQGS 121




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08827.1 hypothetical protein TVAG_213360 [Trichomonas
vaginalis G3]
         (271 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351318  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   4.4  

>EAY08827.1 on XP_001351318  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2169

 Score = 25.4 bits (54), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 13/48 (27%), Positives = 24/48 (50%)

Query: 203 KAPDFHFCTLECEEIELKIKKTQKEIENNLKRAERTVRKIQDQFETAE 250
           K  D H C++ C++ E  IK  ++E E    +  + ++K  +   T E
Sbjct: 368 KGYDCHKCSVACDDFEPWIKNQKQEFEKQKGKYTKEMQKYANGTTTKE 415




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08836.1 STE family protein kinase [Trichomonas
vaginalis G3]
         (307 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    56   7e-10
XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 25   9.0  

>EAY08836.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 55.8 bits (133), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 104/223 (46%), Gaps = 19/223 (8%)

Query: 3   DKYEIIERLGQGSFGSVCKAIRK--SDQKVVAIKEISYSQMDNKKKQMLINEVNALRNIQ 60
           D YEI+ ++G+G F  V + +     D+ V+ I +    +   ++ ++L N    LR   
Sbjct: 53  DSYEIVRKIGRGKFSEVFEGLNTVTKDKCVIKILKPVKKKKIKREIKILQN----LRGGP 108

Query: 61  NEHVVGYYDRIVVREKKLMYIVMEYCEKGDLQQLIRKTRADNDRIPESAIWQVLTDMCIA 120
           N  ++   D +   + +   ++ E+    D + L       + +     I+Q+L     A
Sbjct: 109 N--IIKLLDIVKDPQSRTPSLIFEHVNNTDFKTLYPTLTIQDIKY---YIYQLLK----A 159

Query: 121 LDSCHPK-MIHRDIKPGNIFISGNGHV-KLGDFGLAREIE-DGAASTYAGTPPYMSPEL- 176
           ++ CH + ++HRDIKP N+ I     + +L D+GLA     +   S    T  Y  PEL 
Sbjct: 160 MNYCHSQGIMHRDIKPHNVMIDHEKKILRLIDWGLAEFYHPEQEYSVRVATRYYKGPELL 219

Query: 177 ISHQPYDEKSDIWALGCVLFELADLHLPFNGSNEVITQLIQTG 219
           +  + YD   DIW++GC+L  +     PF   ++   QL++  
Sbjct: 220 VDMRYYDYSLDIWSIGCMLAGIIFKKEPFFYGHDNYDQLVKIA 262



>EAY08836.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 24.6 bits (52), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 14/41 (34%), Positives = 26/41 (63%)

Query: 23   IRKSDQKVVAIKEISYSQMDNKKKQMLINEVNALRNIQNEH 63
            + KSDQ V+ I  ++ + + NK K +LIN +   +N++ E+
Sbjct: 1654 VSKSDQIVINIDSLNMNDIYNKDKDLLINILKEKQNMEAEY 1694




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08837.1 hypothetical protein TVAG_050710 [Trichomonas
vaginalis G3]
         (386 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_820670   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   8.8  
XP_814753   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   9.2  

>EAY08837.1 on XP_820670   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 883

 Score = 25.0 bits (53), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 12/23 (52%), Positives = 15/23 (65%)

Query: 200 IKTLGNKSITLIEREEPHTPTTS 222
           I TL   +IT  + E+P TPTTS
Sbjct: 711 ITTLAKNTITNPKPEDPKTPTTS 733



>EAY08837.1 on XP_814753   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 882

 Score = 25.0 bits (53), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 12/23 (52%), Positives = 15/23 (65%)

Query: 200 IKTLGNKSITLIEREEPHTPTTS 222
           I TL   +IT  + E+P TPTTS
Sbjct: 710 ITTLAKNTITNPKPEDPKTPTTS 732




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08855.1 ankyrin repeat protein, putative [Trichomonas
vaginalis G3]
         (254 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_817493   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   0.23 
XP_821137   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.51 
XP_814753   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.8  
XP_819344   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   2.8  
XP_813429   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   5.3  
XP_814186   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   6.1  
XP_818662   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   6.7  
XP_806901   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   8.7  
XP_812793   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   8.8  

>EAY08855.1 on XP_817493   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 765

 Score = 29.3 bits (64), Expect = 0.23,   Method: Composition-based stats.
 Identities = 15/26 (57%), Positives = 18/26 (69%)

Query: 205 GSTPLHWAAIDGSKETTEILISNGAD 230
           GSTPL  A++ GSK T  I +S GAD
Sbjct: 571 GSTPLLGASLRGSKRTKLIGLSYGAD 596



>EAY08855.1 on XP_821137   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 956

 Score = 28.1 bits (61), Expect = 0.51,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 7/70 (10%)

Query: 165 INAKDEDGCTPLHYAAGNNNKETAEILISNGADINAKNKDGSTPLHWAAI-DGSKETTEI 223
           + AK  DG  P+      NNKE   IL+  G     +NK+ S+  +W  + D ++    I
Sbjct: 617 MGAKMSDGNNPVLLGLSYNNKEKKWILLCGG----GQNKEHSS--NWETLTDTTQYQLAI 670

Query: 224 LISNGADINA 233
           ++ NG   +A
Sbjct: 671 VLKNGTQGSA 680



>EAY08855.1 on XP_814753   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 882

 Score = 26.6 bits (57), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 3/61 (4%)

Query: 181 GNNNKETAEILISNGADINAK-NKDGSTPLHWAAIDGSKETTEILISNGADINAKDKDGC 239
           GN + +T E  +S+GAD       DG   +H  + +G  ++  +  S G      + D C
Sbjct: 802 GNGSPQTPEATVSSGADGETTGGTDGQEGIH--SQNGEVKSAALSSSLGNSSQGNNSDAC 859

Query: 240 T 240
           T
Sbjct: 860 T 860



>EAY08855.1 on XP_819344   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 861

 Score = 25.8 bits (55), Expect = 2.8,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 17/97 (17%)

Query: 159 ISKGAD---INAKDEDG--CTPLHYAAGNNNKETAEILISNGADINAKNKDGSTPLH-WA 212
           +S  AD   I+ K+ DG  CT      G+ +   ++++   G+ +   +     P+    
Sbjct: 211 VSSEADNKQIHWKETDGVPCT-----LGDQHNSLSQLIGGGGSGVKMNDSTLVFPVEGLK 265

Query: 213 AIDGSKETTEILISNGADINAKD------KDGCTPSS 243
            +DG+K+T  ++I N AD  +         DGC+  S
Sbjct: 266 ELDGNKKTVSLIIHNSADTKSWKLSKEVPYDGCSDPS 302



>EAY08855.1 on XP_813429   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 818

 Score = 25.0 bits (53), Expect = 5.3,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 18/29 (62%)

Query: 165 INAKDEDGCTPLHYAAGNNNKETAEILIS 193
           ++  D+   + L Y +G+NNK+  E LI+
Sbjct: 404 VSGDDDVAASSLLYKSGDNNKDKKEELIA 432



>EAY08855.1 on XP_814186   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 883

 Score = 24.6 bits (52), Expect = 6.1,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 2/60 (3%)

Query: 179 AAGNNNKETAEILISNGADINAKNKDGSTPLHWAAIDGSKETTEILISNGADINAKDKDG 238
           A G      A I  +  +D++     GS        DGS +T E+ +S+G D      DG
Sbjct: 768 ADGGGVSSAASIATTPSSDVDQTVATGSGDTMRG--DGSPQTPEVGVSSGVDETVGGTDG 825



>EAY08855.1 on XP_818662   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1038

 Score = 24.6 bits (52), Expect = 6.7,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 160 SKGADINAKD-EDGCTPLHYAAGNNNKETAEILISNGADINAKNKDGSTPLH 210
           + GA+ +++D ++    +  A GN N    EI+IS  ++  A +  G  P H
Sbjct: 948 TDGAEFSSEDGKEVPQTVDTAPGNTNTTPGEIMISLESNATAPSDAGILPEH 999



>EAY08855.1 on XP_806901   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 369

 Score = 24.3 bits (51), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 6/36 (16%)

Query: 215 DGSKETTEILISNGAD------INAKDKDGCTPSSN 244
           DGS +T E+ +S+GAD       +A+ ++G  P + 
Sbjct: 287 DGSPQTPEVSVSSGADGETTGRTDAQGEEGIHPQAG 322



>EAY08855.1 on XP_812793   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 920

 Score = 24.3 bits (51), Expect = 8.8,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 29/69 (42%), Gaps = 9/69 (13%)

Query: 179 AAGNNNKETAEILISNGADINAKNKDGSTPLHWAAIDGSKETTEILISNGADINAKDKDG 238
            A N NK    + +    + +A    G          G +E  ++L+S+GAD+ +     
Sbjct: 712 GAFNPNKANIPVQVDKSVEGDAVQSSGG---------GKEEQGQLLVSSGADVVSAPTVS 762

Query: 239 CTPSSNNNQ 247
             P+S+  +
Sbjct: 763 SAPTSSGEE 771




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08868.1 hypothetical protein TVAG_051030 [Trichomonas
vaginalis G3]
         (365 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001611897  variant erythrocyte surface antigen-1, alpha subun...    27   2.0  
AAQ04681  POP Tc80  (Invasion)  [Trypanosoma cruzi]                    25   2.2  
XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 25   7.5  

>EAY08868.1 on XP_001611897  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1369

 Score = 26.9 bits (58), Expect = 2.0,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 43/86 (50%), Gaps = 10/86 (11%)

Query: 81  LKSHSSVAHSRMINELQTEHQDNIIKTRIKYESKIAELQLQNKNNTPVADILSKIDTTRS 140
           L + ++ +H+  + ++ +E Q    K R  Y S       +++ +  +  +L  + T + 
Sbjct: 773 LDTLANGSHAGSLQQITSEAQ----KWRKDYSSA------KDRISEVIHKVLEVLTTLKE 822

Query: 141 KISESLKEKMDQNEKQIQNELASLSD 166
            + E +KE+M+ +EK + + +  L D
Sbjct: 823 GVKEKIKEEMNGHEKALNDAIDKLKD 848



>EAY08868.1 on AAQ04681  POP Tc80  (Invasion)  [Trypanosoma cruzi]
          Length = 70

 Score = 25.0 bits (53), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 14/58 (24%), Positives = 26/58 (44%)

Query: 206 LHKRRTIAIDESEASIKEQYEMFEKSQLAEINSIRDKNNSSLEKIRGKIAEQRNKVFK 263
           L +R   A      ++ E Y+  E  +  E  +  ++ N+  E+     AE R K+F+
Sbjct: 7   LARRSMAAYTMHNMTVPEPYDYLEDPENPETKTFVNEQNAFFEEYFASEAELRKKIFE 64



>EAY08868.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 25.4 bits (54), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)

Query: 4   TSFLSTKNRYKEKK-LNELQEIVELQNEEIIRL 35
           + FL TK  + EKK +NELQ I+   N E  +L
Sbjct: 701 SHFLDTKYLFHEKKSVNELQTILNTSNNECAKL 733




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08870.1 hypothetical protein TVAG_051050 [Trichomonas
vaginalis G3]
         (548 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08871.1 hypothetical protein TVAG_051060 [Trichomonas
vaginalis G3]
         (370 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001349512  PfEMP1  (Establishment)  [Plasmodium falciparum]         30   0.30 

>EAY08871.1 on XP_001349512  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2980

 Score = 29.6 bits (65), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 4/55 (7%)

Query: 138  LCDFLPRLLLLPSDVLKDAKLIVTNYASFGYECVKIAGIPKKNLLAPPADTAVFV 192
            +CD + ++L    D L+DA  +  N   +G++C  I+G     L  PP    ++V
Sbjct: 1715 VCDIVSKILT--KDALQDACKLKYNGKYYGWKC--ISGATTGGLCIPPRRRKLYV 1765




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08872.1 hypothetical protein TVAG_051070 [Trichomonas
vaginalis G3]
         (125 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_807421   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   7.4  

>EAY08872.1 on XP_807421   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 727

 Score = 23.1 bits (48), Expect = 7.4,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 3/38 (7%)

Query: 7   TYMWDMVKYWKHPSKATPIGTVMTIPATGSEWNNGAVI 44
           TY  D    W  P   +P+G V       +EW  G ++
Sbjct: 293 TYSTDNGNTWVFPESISPVGCV---DPRITEWETGQIL 327




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08873.1 Inositol monophosphatase family protein
[Trichomonas vaginalis G3]
         (277 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08877.1 hypothetical protein TVAG_051120 [Trichomonas
vaginalis G3]
         (129 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_806381   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   1.2  
AAM64207  RAP3  (Invasion)  [Plasmodium falciparum]                    23   5.0  
XP_001350935  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   5.0  

>EAY08877.1 on XP_806381   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1045

 Score = 25.4 bits (54), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 3/35 (8%)

Query: 95  SDSSY--SRIDLNEPQTSSDLYNVTRTEPPVFWRE 127
           SDSS   S+ID  EP+++ D  N++RTE   F  E
Sbjct: 930 SDSSLTPSKIDA-EPRSAEDTDNISRTEGAEFSSE 963



>EAY08877.1 on AAM64207  RAP3  (Invasion)  [Plasmodium falciparum]
          Length = 400

 Score = 23.5 bits (49), Expect = 5.0,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 9/62 (14%)

Query: 14  FSGLPKEYSLDALKSLFASQGDIRTM---------IISASHENGYVIYQTEAQLQRAFNE 64
            S L  EY  D L S+   + D   +         I+  +  N + IY+ +      FNE
Sbjct: 135 LSTLKHEYFFDKLPSIIVKEKDASHIVKRTDFLQDILEKADLNNHAIYKNDPTKVFIFNE 194

Query: 65  LN 66
           +N
Sbjct: 195 IN 196



>EAY08877.1 on XP_001350935  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2268

 Score = 23.5 bits (49), Expect = 5.0,   Method: Composition-based stats.
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 26   LKSLFASQGDIRTMIISASHENG 48
            L+ +F + GD R ++ S   ENG
Sbjct: 1117 LRQMFYTLGDYRDILYSGDKENG 1139




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08900.1 hypothetical protein TVAG_464480 [Trichomonas
vaginalis G3]
         (1241 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001350935  PfEMP1  (Establishment)  [Plasmodium falciparum]         29   1.8  
XP_001349033  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   3.5  
XP_001351319  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   5.0  
XP_829776  VSG  (Establishment)  [Trypanosoma brucei]                  27   5.8  

>EAY08900.1 on XP_001350935  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2268

 Score = 29.3 bits (64), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 11/31 (35%), Positives = 19/31 (61%)

Query: 784 NQQLNRNKEVIEFAAKSIQNIENVVRGNDLL 814
           +QQ N + ++    A+S  +I ++VRG DL 
Sbjct: 176 HQQTNNDSQICTVLARSFADIGDIVRGRDLF 206



>EAY08900.1 on XP_001349033  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2064

 Score = 28.5 bits (62), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)

Query: 769 VLSSAKRDDETAAKCNQQLNRNKEVIEFA-AKSIQNIENVVRGNDLL 814
           V  +AK + E+  K   Q   N EVI  A A+S  +I +++RG DL 
Sbjct: 138 VCLAAKHEGESIIKNYPQDRNNNEVICTALARSFADIGDIIRGKDLY 184



>EAY08900.1 on XP_001351319  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2646

 Score = 27.7 bits (60), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%)

Query: 323 SFKQAIDSVNS-IKEIAKKQAEENGQTKDLQKTIEKLQKKLQKMKELNLNLISENEQLQN 381
           S K  +DS+   + +  K  A+  G + D +  I+ L+  LQK   +N  LI  ++  + 
Sbjct: 21  SAKHLLDSIGKKVHDQVKNGADGTGASGDAKNYIDDLKGDLQKAPNINPKLIGTDDPCKL 80

Query: 382 EHAEYQNEL 390
               Y N +
Sbjct: 81  VEDYYNNHV 89



>EAY08900.1 on XP_829776  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 471

 Score = 27.3 bits (59), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 2/61 (3%)

Query: 993  EIANLRKENADLEHEIDDKNATIRSLTVQLSQLKNDTEIQINTAKKASEDSQSSSQQKQE 1052
            EIA  + ++A+LE  I+ K  TI  LTV+   + N    +++T +K SE   S+   +Q 
Sbjct: 167  EIAGEQAKHANLETAINSKGFTIAGLTVKACAVTNK-GCRLHT-RKTSEGIISTGSPEQT 224

Query: 1053 K 1053
            K
Sbjct: 225  K 225




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08902.1 surface antigen BspA-like [Trichomonas
vaginalis G3]
         (814 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08907.1 hypothetical protein TVAG_464550 [Trichomonas
vaginalis G3]
         (230 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001349513  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   0.38 

>EAY08907.1 on XP_001349513  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2858

 Score = 28.5 bits (62), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 28/151 (18%), Positives = 66/151 (43%), Gaps = 19/151 (12%)

Query: 35   VKFIDQQNQVKTIDTIPEMIISFTFEDMIEDYNPIFRCSAKDETKIAQIFVD---RIQKY 91
             +F   +N VK  +   +  +++TF+D    Y+ + +C  + E +I +  V+   +I + 
Sbjct: 1191 TQFCKNKNGVKAANDAED--VNYTFKDTPNGYDVVCKCKDRPEQQIKKKEVEDACKIAQD 1248

Query: 92   QIKGKWPTTKAPILKHNQIYDQVHHHIHVQTDGDFPIG----IP----------LSYEYK 137
              KGK   T   + K        +     + +     G    +P          L+++ +
Sbjct: 1249 IFKGKDENTTVGLCKKKDFGRTPYPDWKCEKNSKLVTGNGECMPPRRQKLCLYFLAHKIE 1308

Query: 138  NVFFESQNDIRFSYSLESSSDTFYPFFYSEK 168
                 +Q D+R ++   ++++TF+ ++Y +K
Sbjct: 1309 TPNLNTQEDLRKAFIKCAAAETFFSWYYFKK 1339




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08918.1 hypothetical protein TVAG_464660 [Trichomonas
vaginalis G3]
         (420 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_651378  Lgl4  (Adhesin)  [Entamoeba histolytica]                    28   0.94 
XP_818708   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   6.4  

>EAY08918.1 on XP_651378  Lgl4  (Adhesin)  [Entamoeba histolytica]
          Length = 271

 Score = 28.1 bits (61), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 36/170 (21%), Positives = 72/170 (42%), Gaps = 19/170 (11%)

Query: 108 LSSKYVISAEVISTINNSPDGVINIDATVNISEKLSYGSTKLIVKELILHEYGLLACVHH 167
           +S  +V +A+    I+N P G  N +A  N++   SY  +K  V++    E G+ +    
Sbjct: 8   ISVAFVNAADSSQGIDNYPYGKKNTNANFNVAFDSSY--SKYQVQQYA--ESGVFSANQE 63

Query: 168 NTGVIPCTIYNAKKINFIFSTNPGYSTEQNEILFDDLFWAGKNTFDVLETNLSIKKINLI 227
           N     C          IF+++  Y T++     DD+   G + + V++     K+    
Sbjct: 64  NYVRAKCKT----CCRVIFASDYNYKTKKPFTDADDI--RGDDRY-VMDMEFDDKRSVRF 116

Query: 228 SEAASIEEIVIFQSNTFLKLTKNETMIQFKYIESPFSVFSKFCFGGNIED 277
            +         ++ N  L+  K E  +QF +  +P+ +++ F     + D
Sbjct: 117 YQGN-------YEQNILLRPLKQENELQF-FEFAPYKMYTSFSIPRRVHD 158



>EAY08918.1 on XP_818708   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 929

 Score = 25.8 bits (55), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 10/96 (10%)

Query: 288 YQSYNDSWKSYLTSHTQRIILAFNDTKETIDLMNINDTQTLDLQLSGNTEVNIVCSSPPN 347
           Y S N  W   LT+  +R+       KE +      D     L  S   E  +  +SP +
Sbjct: 456 YTSSNSLWSVRLTAQLERV-------KEVLKTWKEADKHVSQLCPS---ESAVQATSPDS 505

Query: 348 NIQSLFVTGGIVNFDFDNFTELSMLLVISNTNITLK 383
             ++  +T G+V F   NF++ +        N T+K
Sbjct: 506 ACKNTKITDGLVGFFSGNFSDKTWRDEYLGVNATVK 541




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08919.1 hypothetical protein TVAG_464670 [Trichomonas
vaginalis G3]
         (656 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609540  variant erythrocyte surface antigen-1, alpha subun...    30   0.39 
XP_001609751  variant erythrocyte surface antigen-1, alpha subun...    30   0.57 
XP_001609618  variant erythrocyte surface antigen-1, alpha subun...    30   0.62 
XP_001609450  variant erythrocyte surface antigen-1, alpha subun...    28   1.5  
XP_001611442  variant erythrocyte surface antigen-1, alpha subun...    28   2.7  
XP_001609101  variant erythrocyte surface antigen-1, alpha subun...    27   3.4  
XP_001609163  variant erythrocyte surface antigen-1, alpha subun...    27   3.4  
ACB87908  Rh5  (Adhesin)  [Plasmodium falciparum]                      27   4.6  

>EAY08919.1 on XP_001609540  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1349

 Score = 30.4 bits (67), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 11/27 (40%), Positives = 18/27 (66%)

Query: 76  GFVHSVDTDAFDREMMKRKNEVLQKNK 102
           G++H+VD  AFD ++ K   + + KNK
Sbjct: 415 GYIHTVDRGAFDSDVFKENGKDINKNK 441




 Score = 27.7 bits (60), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 8/57 (14%)

Query: 88   REMMKRKNEVLQKNKKSKQQEEYENSDITSLVTQEPYLQY-----WINTDTVQSIVA 139
             E +   + V+ KNK++  QE++    +T+L++Q   LQY     WI   T+  +VA
Sbjct: 1244 HEFLDSLSAVIDKNKQATSQEQHP---LTNLLSQVGKLQYDIRLPWIFVLTLAWLVA 1297



>EAY08919.1 on XP_001609751  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1298

 Score = 30.0 bits (66), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 76  GFVHSVDTDAFDREMMKRKNEVLQKNK 102
           G++H+VD  AFD  + K     + KNK
Sbjct: 371 GYIHTVDKGAFDSSVFKGTGNGIDKNK 397



>EAY08919.1 on XP_001609618  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1325

 Score = 29.6 bits (65), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 11/27 (40%), Positives = 17/27 (62%)

Query: 76  GFVHSVDTDAFDREMMKRKNEVLQKNK 102
           G++H+VD  AFD  + K  +  + KNK
Sbjct: 418 GYIHTVDRGAFDSSVFKENSNGVDKNK 444



>EAY08919.1 on XP_001609450  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1309

 Score = 28.5 bits (62), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 7/59 (11%)

Query: 88   REMMKRKNEVLQKNKK--SKQQEEYENSDITSLVTQEPYLQY-----WINTDTVQSIVA 139
             E +   + V+ KNK+  + QQ++ E   +T+L++Q   LQY     WI   T+  +VA
Sbjct: 1199 HEFLDSLSAVIDKNKQEGASQQQDQEQHPLTNLLSQVGKLQYDIRLPWIFVLTLAWLVA 1257



>EAY08919.1 on XP_001611442  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1350

 Score = 27.7 bits (60), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 49/115 (42%), Gaps = 33/115 (28%)

Query: 55   PPSPSESITNTQEYLKKLARDGFVHSVDTDAFDREMMKRKNEV-----LQKNKKSKQQEE 109
            P    +SI +    L  L R GF +    + F+ E  ++K E      ++  KK+KQ  E
Sbjct: 1187 PLCNCQSIVSCTGVLPVLYRHGFSYG---NPFNLEGYEQKEEEDLQFDIEDTKKAKQCHE 1243

Query: 110  Y--------ENSD------------ITSLVTQEPYLQY-----WINTDTVQSIVA 139
            +        EN++            +T+L+TQ   LQY     WI   T+  +VA
Sbjct: 1244 FLDSLKKVIENAEKDKQDQATKEHPLTNLLTQVGQLQYDIRLPWIFVLTLAWLVA 1298



>EAY08919.1 on XP_001609101  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1359

 Score = 27.3 bits (59), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%)

Query: 76  GFVHSVDTDAFDREMMKRKNEV-LQKNKKS 104
           G++H+VD  AFD  + K   +  + KNK+ 
Sbjct: 404 GYIHTVDRGAFDSSVFKGTGDTKIDKNKQG 433



>EAY08919.1 on XP_001609163  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1360

 Score = 27.3 bits (59), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%)

Query: 76  GFVHSVDTDAFDREMMKRKNEV-LQKNKKS 104
           G++H+VD  AFD  + K   +  + KNK+ 
Sbjct: 404 GYIHTVDRGAFDSSVFKGTGDTKIDKNKQG 433



>EAY08919.1 on ACB87908  Rh5  (Adhesin)  [Plasmodium falciparum]
          Length = 526

 Score = 26.6 bits (57), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 16/102 (15%)

Query: 63  TNTQEYLKKL---ARDGFV--HSVDTDAFDREMMKRKNEVLQKNKKSKQQEEYENSDITS 117
           TN  + LK L   + + F+  +SV     D  ++  KN+V       K  E+Y+N D  +
Sbjct: 89  TNVNDGLKYLFIPSHNSFIKKYSVFNQINDGMLLNEKNDV-------KNNEDYKNVDYKN 141

Query: 118 LVTQEPYLQYWINTDTVQSIVAEINKLPLREVHTNFILVSRF 159
           +     +LQY     +  +I   I+ L  +E H +F+++  +
Sbjct: 142 V----NFLQYHFKELSNYNIANSIDILQEKEGHLDFVIIPHY 179




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08922.1 hypothetical protein TVAG_464700 [Trichomonas
vaginalis G3]
         (147 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609449  variant erythrocyte surface antigen-1, beta subuni...    25   3.1  
XP_966160  PfEMP1  (Establishment)  [Plasmodium falciparum]            24   3.6  
XP_807279   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   3.6  
XP_844699  VSG  (Establishment)  [Trypanosoma brucei]                  23   6.8  

>EAY08922.1 on XP_001609449  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 776

 Score = 24.6 bits (52), Expect = 3.1,   Method: Composition-based stats.
 Identities = 10/26 (38%), Positives = 18/26 (69%)

Query: 44  KQTLGLSSDEEVDVRNSIRNQINEAL 69
           K+T+G SSD E +   SI + +N+++
Sbjct: 698 KKTIGKSSDSETNPYPSIEDHMNKSV 723



>EAY08922.1 on XP_966160  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2394

 Score = 24.3 bits (51), Expect = 3.6,   Method: Composition-based stats.
 Identities = 10/30 (33%), Positives = 19/30 (63%)

Query: 1    MSAVGFQNHVDINLIIHRDSEDIKIGFPFD 30
            ++A  F+N  D+N ++ R S++ + GF  D
Sbjct: 1692 ITAENFENKTDVNEVVMRVSDNAESGFKGD 1721



>EAY08922.1 on XP_807279   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 872

 Score = 24.3 bits (51), Expect = 3.6,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 10/56 (17%)

Query: 44  KQTLGLSSDEEVDVRNSIRNQINEALRQSLTDFRQQIQPKEEEYSDGLDDEVFSDP 99
           +Q  G  +  +V V +  R++ + A+ + LT          E+Y+D L++E   DP
Sbjct: 767 EQPTGQVAGTDVSVASESRSEESTAIYEELT----------EDYTDELEEESVDDP 812



>EAY08922.1 on XP_844699  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 341

 Score = 23.5 bits (49), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 11/31 (35%), Positives = 19/31 (61%)

Query: 87  YSDGLDDEVFSDPEYKALLERQKAEIAAMEE 117
           Y  G D++  S  E+ + LE  ++E+A +EE
Sbjct: 223 YPRGTDEDNASGIEWLSKLETLRSEVATVEE 253




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08939.1 hypothetical protein TVAG_485860 [Trichomonas
vaginalis G3]
         (74 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001352240  PfEMP1  (Establishment)  [Plasmodium falciparum]         22   4.5  
XP_965999  PfEMP1  (Establishment)  [Plasmodium falciparum]            22   4.9  

>EAY08939.1 on XP_001352240  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 1315

 Score = 22.3 bits (46), Expect = 4.5,   Method: Composition-based stats.
 Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 14/61 (22%)

Query: 24  ELDESLFLVP----NGCINSTESSDRLRRGMFVFKRSLISIAF----------SNRSNES 69
           E D +  LVP    N CIN     D   +    FK  L++ AF          SN SNE+
Sbjct: 516 ENDNNGVLVPPRRRNLCINLFSKKDYKMKDENDFKEDLLNAAFSQGKLLGKKYSNYSNEA 575

Query: 70  F 70
           +
Sbjct: 576 Y 576



>EAY08939.1 on XP_965999  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 1325

 Score = 21.9 bits (45), Expect = 4.9,   Method: Composition-based stats.
 Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 14/61 (22%)

Query: 24  ELDESLFLVP----NGCINSTESSDRLRRGMFVFKRSLISIAF----------SNRSNES 69
           E D +  LVP    N CIN     D   +    FK  L++ AF          SN SNE+
Sbjct: 526 ENDNNGVLVPPRRRNLCINLFSKKDYKMKDENDFKEDLLNAAFSQGKLLGKKYSNYSNEA 585

Query: 70  F 70
           +
Sbjct: 586 Y 586




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08944.1 hypothetical protein TVAG_485910 [Trichomonas
vaginalis G3]
         (159 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_818963   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.34 
XP_808394   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   2.3  
XP_001347297  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   3.2  
XP_818403   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   7.2  
XP_804553   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   8.8  

>EAY08944.1 on XP_818963   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1055

 Score = 27.7 bits (60), Expect = 0.34,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 66  STASYSSISSKSVSSQSSNSSTPPNRNK-SQTSNNFESNSHQSFASFLSDSD 116
           + A  SS+S  ++++QS+ +S P N  +  Q   + ++  H++  S   DSD
Sbjct: 784 TVAGGSSVSESAIAAQSAENSLPENNAQFHQGETSQQTTPHEAKESMQRDSD 835



>EAY08944.1 on XP_808394   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 912

 Score = 25.0 bits (53), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 53  PVITPTISSPHRLSTASYSSISSKSVSSQSSNSST 87
           P +TP  + P   +T + SS+ S S  S ++ SS+
Sbjct: 725 PSLTPAGTQPTEQATLNASSVPSGSTPSTTAESSS 759



>EAY08944.1 on XP_001347297  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 144

 Score = 24.3 bits (51), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 12/55 (21%), Positives = 25/55 (45%)

Query: 34 DILSTCRSEFTDPENFQFKPVITPTISSPHRLSTASYSSISSKSVSSQSSNSSTP 88
          D+L+    E+T         +   T+   H+++  +Y+ IS  ++ S + N   P
Sbjct: 10 DMLNKFNDEWTTEHKENMLDIPESTLDDIHKINDKTYNMISRNNIYSHNDNDKIP 64



>EAY08944.1 on XP_818403   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 957

 Score = 23.5 bits (49), Expect = 7.2,   Method: Composition-based stats.
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 121 SSFEKKPKPKKQPKPYRIKRDQEIDE 146
           +S EK P P   PK Y + RD + D+
Sbjct: 67  TSEEKSPAPIPSPKTYFVWRDVKNDK 92



>EAY08944.1 on XP_804553   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 827

 Score = 23.5 bits (49), Expect = 8.8,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 40/94 (42%), Gaps = 9/94 (9%)

Query: 42  EFTDPENFQFKPVITPTISSPHRLSTASYSSISSKSVSSQSSNSSTPPNRNKSQTSNNFE 101
           + T+P++    PV TP  +  H   + +++ ++S ++          PN N    +    
Sbjct: 549 QLTEPDSGVMWPVNTPDGNVRHVSLSHNFTIVASVTIEE-------APNNNTPLLTALLG 601

Query: 102 SNSHQSFA--SFLSDSDHETFSSFEKKPKPKKQP 133
               + F   S+ +D+  ET    E KP  + +P
Sbjct: 602 DAGPEYFMRLSYTADNKWETIVKGETKPTTESRP 635




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08958.1 hypothetical protein TVAG_486050 [Trichomonas
vaginalis G3]
         (1618 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08961.1 Microtubule associated protein 1A/1B, light
chain 3 containing protein [Trichomonas vaginalis G3]
         (123 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CAA70921  MIC5  (Others)  [Toxoplasma gondii]                          23   7.4  

>EAY08961.1 on CAA70921  MIC5  (Others)  [Toxoplasma gondii]
          Length = 231

 Score = 22.7 bits (47), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 4   SKNESRYKREKSFADRCQESAGIIRKFKSHVPVIVDKDPKC 44
           SKN S+  + +SF+ R +E  G I  F +   V + + PK 
Sbjct: 167 SKNFSKMAKSQSFSTRIEELGGSI-SFLTETGVTMIELPKT 206




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08962.1 hypothetical protein TVAG_486090 [Trichomonas
vaginalis G3]
         (277 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAS46317   JESEBL/EBA-181  (Adhesin)  [Plasmodium falciparum]          25   6.4  
AAT99618   JESEBL/EBA-181  (Adhesin)  [Plasmodium falciparum]          25   8.3  
AAT99622   JESEBL/EBA-181  (Adhesin)  [Plasmodium falciparum]          25   8.4  
AAS46308   JESEBL/EBA-181  (Adhesin)  [Plasmodium falciparum]          25   8.6  
AAT99615   JESEBL/EBA-181  (Adhesin)  [Plasmodium falciparum]          24   8.7  
AAT99621   JESEBL/EBA-181  (Adhesin)  [Plasmodium falciparum]          24   8.7  
AAT99620   JESEBL/EBA-181  (Adhesin)  [Plasmodium falciparum]          24   8.8  
AAS46319   JESEBL/EBA-181  (Adhesin)  [Plasmodium falciparum]          24   8.8  
AAS46318   JESEBL/EBA-181  (Adhesin)  [Plasmodium falciparum]          24   9.0  
AAS46324   JESEBL/EBA-181  (Adhesin)  [Plasmodium falciparum]          24   9.1  
AAS46326   JESEBL/EBA-181  (Adhesin)  [Plasmodium falciparum]          24   9.2  
AAS46321   JESEBL/EBA-181  (Adhesin)  [Plasmodium falciparum]          24   9.2  
AAS46309   JESEBL/EBA-181  (Adhesin)  [Plasmodium falciparum]          24   9.3  
AAS46323   JESEBL/EBA-181  (Adhesin)  [Plasmodium falciparum]          24   9.3  
AAS46325   JESEBL/EBA-181  (Adhesin)  [Plasmodium falciparum]          24   9.4  
AAS46316   JESEBL/EBA-181  (Adhesin)  [Plasmodium falciparum]          24   9.4  
AAS46311   JESEBL/EBA-181  (Adhesin)  [Plasmodium falciparum]          24   9.4  
AAS46315   JESEBL/EBA-181  (Adhesin)  [Plasmodium falciparum]          24   9.6  
AAS46313   JESEBL/EBA-181  (Adhesin)  [Plasmodium falciparum]          24   9.8  
AAS46314   JESEBL/EBA-181  (Adhesin)  [Plasmodium falciparum]          24   9.9  

>EAY08962.1 on AAS46317   JESEBL/EBA-181  (Adhesin)  [Plasmodium falciparum]
          Length = 672

 Score = 25.0 bits (53), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 12/44 (27%), Positives = 21/44 (47%)

Query: 100 KELNENFNPYQDFVIQGACLGKINTTYLQGGSGFVFSRRAAYQI 143
           K +N+++  Y+D VI        N+  +Q     +F R   Y+I
Sbjct: 423 KYINDSYVDYKDIVIGNDLWNDNNSIKVQNNLNLIFERNFGYKI 466



>EAY08962.1 on AAT99618   JESEBL/EBA-181  (Adhesin)  [Plasmodium falciparum]
          Length = 620

 Score = 24.6 bits (52), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 11/44 (25%), Positives = 21/44 (47%)

Query: 100 KELNENFNPYQDFVIQGACLGKINTTYLQGGSGFVFSRRAAYQI 143
           K +N+++  Y+D VI        N+  +Q     +F R   Y++
Sbjct: 392 KYINDSYVDYKDIVIGNDLWNDNNSIKVQNNLNLIFERNFGYKV 435



>EAY08962.1 on AAT99622   JESEBL/EBA-181  (Adhesin)  [Plasmodium falciparum]
          Length = 620

 Score = 24.6 bits (52), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 11/44 (25%), Positives = 21/44 (47%)

Query: 100 KELNENFNPYQDFVIQGACLGKINTTYLQGGSGFVFSRRAAYQI 143
           K +N+++  Y+D VI        N+  +Q     +F R   Y++
Sbjct: 392 KYINDSYVDYKDIVIGNDLWNDNNSIKVQNNLNLIFERNFGYKV 435



>EAY08962.1 on AAS46308   JESEBL/EBA-181  (Adhesin)  [Plasmodium falciparum]
          Length = 657

 Score = 24.6 bits (52), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 11/44 (25%), Positives = 21/44 (47%)

Query: 100 KELNENFNPYQDFVIQGACLGKINTTYLQGGSGFVFSRRAAYQI 143
           K +N+++  Y+D VI        N+  +Q     +F R   Y++
Sbjct: 423 KYINDSYVDYKDIVIGNDLWNDNNSIKVQNNLNLIFERNFGYKV 466



>EAY08962.1 on AAT99615   JESEBL/EBA-181  (Adhesin)  [Plasmodium falciparum]
          Length = 620

 Score = 24.3 bits (51), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 11/44 (25%), Positives = 21/44 (47%)

Query: 100 KELNENFNPYQDFVIQGACLGKINTTYLQGGSGFVFSRRAAYQI 143
           K +N+++  Y+D VI        N+  +Q     +F R   Y++
Sbjct: 392 KYINDSYVDYKDIVIGNDLWNDNNSIKVQNNLNLIFERNFGYKV 435



>EAY08962.1 on AAT99621   JESEBL/EBA-181  (Adhesin)  [Plasmodium falciparum]
          Length = 620

 Score = 24.3 bits (51), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 11/44 (25%), Positives = 21/44 (47%)

Query: 100 KELNENFNPYQDFVIQGACLGKINTTYLQGGSGFVFSRRAAYQI 143
           K +N+++  Y+D VI        N+  +Q     +F R   Y++
Sbjct: 392 KYINDSYVDYKDIVIGNDLWNDNNSIKVQNNLNLIFERNFGYKV 435



>EAY08962.1 on AAT99620   JESEBL/EBA-181  (Adhesin)  [Plasmodium falciparum]
          Length = 620

 Score = 24.3 bits (51), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 11/44 (25%), Positives = 21/44 (47%)

Query: 100 KELNENFNPYQDFVIQGACLGKINTTYLQGGSGFVFSRRAAYQI 143
           K +N+++  Y+D VI        N+  +Q     +F R   Y++
Sbjct: 392 KYINDSYVDYKDIVIGNDLWNDNNSIKVQNNLNLIFERNFGYKV 435



>EAY08962.1 on AAS46319   JESEBL/EBA-181  (Adhesin)  [Plasmodium falciparum]
          Length = 673

 Score = 24.3 bits (51), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 11/44 (25%), Positives = 21/44 (47%)

Query: 100 KELNENFNPYQDFVIQGACLGKINTTYLQGGSGFVFSRRAAYQI 143
           K +N+++  Y+D VI        N+  +Q     +F R   Y++
Sbjct: 423 KYINDSYVDYKDIVIGNDLWNDNNSIKVQNNLNLIFERNFGYKV 466



>EAY08962.1 on AAS46318   JESEBL/EBA-181  (Adhesin)  [Plasmodium falciparum]
          Length = 672

 Score = 24.3 bits (51), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 11/44 (25%), Positives = 21/44 (47%)

Query: 100 KELNENFNPYQDFVIQGACLGKINTTYLQGGSGFVFSRRAAYQI 143
           K +N+++  Y+D VI        N+  +Q     +F R   Y++
Sbjct: 423 KYINDSYVDYKDIVIGNDLWNDNNSIKVQNNLNLIFERNFGYKV 466



>EAY08962.1 on AAS46324   JESEBL/EBA-181  (Adhesin)  [Plasmodium falciparum]
          Length = 673

 Score = 24.3 bits (51), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 11/44 (25%), Positives = 21/44 (47%)

Query: 100 KELNENFNPYQDFVIQGACLGKINTTYLQGGSGFVFSRRAAYQI 143
           K +N+++  Y+D VI        N+  +Q     +F R   Y++
Sbjct: 423 KYINDSYVDYKDIVIGNDLWNDNNSIKVQNNLNLIFERNFGYKV 466



>EAY08962.1 on AAS46326   JESEBL/EBA-181  (Adhesin)  [Plasmodium falciparum]
          Length = 672

 Score = 24.3 bits (51), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 11/44 (25%), Positives = 21/44 (47%)

Query: 100 KELNENFNPYQDFVIQGACLGKINTTYLQGGSGFVFSRRAAYQI 143
           K +N+++  Y+D VI        N+  +Q     +F R   Y++
Sbjct: 423 KYINDSYVDYKDIVIGNDLWNDNNSIKVQNNLNLIFERNFGYKV 466



>EAY08962.1 on AAS46321   JESEBL/EBA-181  (Adhesin)  [Plasmodium falciparum]
          Length = 673

 Score = 24.3 bits (51), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 11/44 (25%), Positives = 21/44 (47%)

Query: 100 KELNENFNPYQDFVIQGACLGKINTTYLQGGSGFVFSRRAAYQI 143
           K +N+++  Y+D VI        N+  +Q     +F R   Y++
Sbjct: 423 KYINDSYVDYKDIVIGNDLWNDNNSIKVQNNLNLIFERNFGYKV 466



>EAY08962.1 on AAS46309   JESEBL/EBA-181  (Adhesin)  [Plasmodium falciparum]
          Length = 663

 Score = 24.3 bits (51), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 11/44 (25%), Positives = 21/44 (47%)

Query: 100 KELNENFNPYQDFVIQGACLGKINTTYLQGGSGFVFSRRAAYQI 143
           K +N+++  Y+D VI        N+  +Q     +F R   Y++
Sbjct: 418 KYINDSYVDYKDIVIGNDLWNDNNSIKVQNNLNLIFERNFGYKV 461



>EAY08962.1 on AAS46323   JESEBL/EBA-181  (Adhesin)  [Plasmodium falciparum]
          Length = 673

 Score = 24.3 bits (51), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 11/44 (25%), Positives = 21/44 (47%)

Query: 100 KELNENFNPYQDFVIQGACLGKINTTYLQGGSGFVFSRRAAYQI 143
           K +N+++  Y+D VI        N+  +Q     +F R   Y++
Sbjct: 423 KYINDSYVDYKDIVIGNDLWNDNNSIKVQNNLNLIFERNFGYKV 466



>EAY08962.1 on AAS46325   JESEBL/EBA-181  (Adhesin)  [Plasmodium falciparum]
          Length = 668

 Score = 24.3 bits (51), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 11/44 (25%), Positives = 21/44 (47%)

Query: 100 KELNENFNPYQDFVIQGACLGKINTTYLQGGSGFVFSRRAAYQI 143
           K +N+++  Y+D VI        N+  +Q     +F R   Y++
Sbjct: 423 KYINDSYVDYKDIVIGNDLWNDNNSIKVQNNLNLIFERNFGYKV 466



>EAY08962.1 on AAS46316   JESEBL/EBA-181  (Adhesin)  [Plasmodium falciparum]
          Length = 671

 Score = 24.3 bits (51), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 11/44 (25%), Positives = 21/44 (47%)

Query: 100 KELNENFNPYQDFVIQGACLGKINTTYLQGGSGFVFSRRAAYQI 143
           K +N+++  Y+D VI        N+  +Q     +F R   Y++
Sbjct: 423 KYINDSYVDYKDIVIGNDLWNDNNSIKVQNNLNLIFERNFGYKV 466



>EAY08962.1 on AAS46311   JESEBL/EBA-181  (Adhesin)  [Plasmodium falciparum]
          Length = 668

 Score = 24.3 bits (51), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 11/44 (25%), Positives = 21/44 (47%)

Query: 100 KELNENFNPYQDFVIQGACLGKINTTYLQGGSGFVFSRRAAYQI 143
           K +N+++  Y+D VI        N+  +Q     +F R   Y++
Sbjct: 423 KYINDSYVDYKDIVIGNDLWNDNNSIKVQNNLNLIFERNFGYKV 466



>EAY08962.1 on AAS46315   JESEBL/EBA-181  (Adhesin)  [Plasmodium falciparum]
          Length = 671

 Score = 24.3 bits (51), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 11/44 (25%), Positives = 21/44 (47%)

Query: 100 KELNENFNPYQDFVIQGACLGKINTTYLQGGSGFVFSRRAAYQI 143
           K +N+++  Y+D VI        N+  +Q     +F R   Y++
Sbjct: 423 KYINDSYVDYKDIVIGNDLWNDNNSIKVQNNLNLIFERNFGYKV 466



>EAY08962.1 on AAS46313   JESEBL/EBA-181  (Adhesin)  [Plasmodium falciparum]
          Length = 662

 Score = 24.3 bits (51), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 11/44 (25%), Positives = 21/44 (47%)

Query: 100 KELNENFNPYQDFVIQGACLGKINTTYLQGGSGFVFSRRAAYQI 143
           K +N+++  Y+D VI        N+  +Q     +F R   Y++
Sbjct: 417 KYINDSYVDYKDIVIGNDLWNDNNSIKVQNNLNLIFERNFGYKV 460



>EAY08962.1 on AAS46314   JESEBL/EBA-181  (Adhesin)  [Plasmodium falciparum]
          Length = 662

 Score = 24.3 bits (51), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 11/44 (25%), Positives = 21/44 (47%)

Query: 100 KELNENFNPYQDFVIQGACLGKINTTYLQGGSGFVFSRRAAYQI 143
           K +N+++  Y+D VI        N+  +Q     +F R   Y++
Sbjct: 417 KYINDSYVDYKDIVIGNDLWNDNNSIKVQNNLNLIFERNFGYKV 460




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08963.1 Myosin tail family protein [Trichomonas
vaginalis G3]
         (226 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_827742  VSG  (Establishment)  [Trypanosoma brucei]                  25   3.4  

>EAY08963.1 on XP_827742  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 505

 Score = 25.4 bits (54), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 5/43 (11%)

Query: 25  GDQTPEEIARKQAADAFFKGKKHRRESSASKYYIGDHLGMHED 67
           G + PE  A+K AAD     KK  ++   +K    D  G  ED
Sbjct: 427 GSEKPEGDAKKNAAD-----KKEEKKDGDNKTTAADFTGTEED 464




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08995.1 hypothetical protein TVAG_073600 [Trichomonas
vaginalis G3]
         (215 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_804432   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   2.2  
XP_802364   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   5.9  
XP_001347692  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   6.4  

>EAY08995.1 on XP_804432   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 799

 Score = 25.8 bits (55), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 3/30 (10%)

Query: 118 NKTWETVHKISKDDSMRDCKDSTYTLDKSY 147
           NKTWET   ISK ++    +  T+ L K Y
Sbjct: 610 NKTWET---ISKGETKPTTESGTWELKKEY 636



>EAY08995.1 on XP_802364   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 327

 Score = 24.3 bits (51), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 3/30 (10%)

Query: 118 NKTWETVHKISKDDSMRDCKDSTYTLDKSY 147
           NKTWET   ISK ++    +  T+ L K Y
Sbjct: 129 NKTWET---ISKGETKPTTESGTWELKKEY 155



>EAY08995.1 on XP_001347692  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2994

 Score = 24.6 bits (52), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 10/35 (28%), Positives = 18/35 (51%)

Query: 136  CKDSTYTLDKSYTTKYVRLIQDEACPGEPPCLAIN 170
            CK+++Y   K Y  ++     D+AC   PP   ++
Sbjct: 2352 CKNTSYNDKKKYAFRHPPHDHDDACACRPPSTPVD 2386




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08996.1 ankyrin repeat protein, putative [Trichomonas
vaginalis G3]
         (314 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08998.1 hypothetical protein TVAG_073640 [Trichomonas
vaginalis G3]
         (336 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_809198   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.60 
XP_815498   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.67 
XP_817996   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.72 
XP_001609935  variant erythrocyte surface antigen-1, alpha subun...    27   1.5  
XP_809007   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.5  

>EAY08998.1 on XP_809198   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 832

 Score = 28.5 bits (62), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 22/103 (21%), Positives = 43/103 (41%), Gaps = 10/103 (9%)

Query: 108 VTIGAYCYISVSEEYPFKNYLLDSTITSSGEENPKENSNIDLVNDETYMKSINISH---- 163
           V +GA C +  +E     ++ +     S+G    KE  ++ + N   Y + ++ +     
Sbjct: 673 VGVGASCALGSTESQEISHFYIGGDERSAGGAGSKEEVSVTVTNVLLYNRPLSTAEMTAL 732

Query: 164 --SKLNYHSFYYVHYNSNSNGTLSTFSNNTSTEFKQVIHYGSS 204
               +N    Y  H  +   GT ST +    +E+  ++  GSS
Sbjct: 733 KMKSVNIPKLY--HAKTEPRGTPSTPAGQQPSEWGHLV--GSS 771



>EAY08998.1 on XP_815498   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 822

 Score = 28.5 bits (62), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 22/103 (21%), Positives = 43/103 (41%), Gaps = 10/103 (9%)

Query: 108 VTIGAYCYISVSEEYPFKNYLLDSTITSSGEENPKENSNIDLVNDETYMKSINISH---- 163
           V +GA C +  +E     ++ +     S+G    KE  ++ + N   Y + ++ +     
Sbjct: 663 VGVGASCALGSTESQKISHFYIGGDERSAGGAGSKEEVSVTVTNVLLYNRPLSTAEMTAL 722

Query: 164 --SKLNYHSFYYVHYNSNSNGTLSTFSNNTSTEFKQVIHYGSS 204
               +N    Y  H  +   GT ST +    +E+  ++  GSS
Sbjct: 723 KMKSVNIPKLY--HAKTEPRGTPSTPAGQQPSEWGHLV--GSS 761



>EAY08998.1 on XP_817996   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 792

 Score = 28.1 bits (61), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 22/103 (21%), Positives = 43/103 (41%), Gaps = 10/103 (9%)

Query: 108 VTIGAYCYISVSEEYPFKNYLLDSTITSSGEENPKENSNIDLVNDETYMKSINISH---- 163
           V +GA C +  +E     ++ +     S+G    KE  ++ + N   Y + ++ +     
Sbjct: 633 VGVGASCALGSTESQEISHFYIGGDERSAGGAGSKEEVSVTVTNVLLYNRPLSTAEMTAL 692

Query: 164 --SKLNYHSFYYVHYNSNSNGTLSTFSNNTSTEFKQVIHYGSS 204
               +N    Y  H  +   GT ST +    +E+  ++  GSS
Sbjct: 693 KMKSVNIPKLY--HAKTEPRGTPSTPAGQQPSEWGHLV--GSS 731



>EAY08998.1 on XP_001609935  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1317

 Score = 27.3 bits (59), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 32/72 (44%), Gaps = 4/72 (5%)

Query: 150 VNDETYMKSINISHSK----LNYHSFYYVHYNSNSNGTLSTFSNNTSTEFKQVIHYGSSD 205
           +ND   +  IN + ++    +NY  F +  +  + N   + F+N + +   +   + +  
Sbjct: 388 LNDGGKVNDINGNTARSPFGMNYAGFVHTAHRDSFNNEATVFTNGSGSSITETNQHKNGA 447

Query: 206 SIEFTILFCNYF 217
             +  IL C YF
Sbjct: 448 IFKLYILSCAYF 459



>EAY08998.1 on XP_809007   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 160

 Score = 26.6 bits (57), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 19/98 (19%), Positives = 40/98 (40%), Gaps = 8/98 (8%)

Query: 108 VTIGAYCYISVSEEYPFKNYLLDSTITSSGEENPKENSNIDLVNDETYMKSINISH---- 163
           V +GA C +  +E     ++ +     S+G    KE  ++ + N   Y + ++ +     
Sbjct: 1   VGVGASCALGSTESQEISHFYIGGDERSAGGAGSKEEVSVTVTNVLLYNRPLSTAEMTAL 60

Query: 164 --SKLNYHSFYYVHYNSNSNGTLSTFSNNTSTEFKQVI 199
               +N    Y  H  +   GT ST +    +E+  ++
Sbjct: 61  KMKSVNIPKLY--HAKTEPRGTPSTPAGQQPSEWGHLV 96




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY08999.1 hypothetical protein TVAG_073650 [Trichomonas
vaginalis G3]
         (116 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAS67870  Leucyl aminopeptidase  (Others)  [Trypanosoma brucei]        24   2.7  
XP_001351080  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   3.4  

>EAY08999.1 on AAS67870  Leucyl aminopeptidase  (Others)  [Trypanosoma brucei]
          Length = 671

 Score = 24.3 bits (51), Expect = 2.7,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 21  PIPRRSERSHSFVQGKHNSLDSKIE 45
           P PRR  R+ +  +G H  L+  I+
Sbjct: 187 PPPRRGRRNKAVAEGSHEQLNLIID 211



>EAY08999.1 on XP_001351080  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2209

 Score = 23.9 bits (50), Expect = 3.4,   Method: Composition-based stats.
 Identities = 13/25 (52%), Positives = 14/25 (56%)

Query: 66   SNSDSLSSTSSYVSSDQFVNDFLNS 90
            SN DSLS T    S    +ND LNS
Sbjct: 2001 SNRDSLSGTKVPYSGIDLINDSLNS 2025




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09004.1 Kelch motif family protein [Trichomonas
vaginalis G3]
         (1006 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_827769  VSG  (Establishment)  [Trypanosoma brucei]                  30   0.71 
XP_808081   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.96 
XP_807431   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   2.1  
XP_001707641  CWP3  (Others)  [Giardia duodenalis]                     27   4.2  
XP_806228   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   4.7  
XP_821909   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   5.5  
XP_816303   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   5.8  
XP_001349035  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   7.2  
XP_828092  VSG  (Establishment)  [Trypanosoma brucei]                  27   7.7  

>EAY09004.1 on XP_827769  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 533

 Score = 30.0 bits (66), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 55/142 (38%), Gaps = 40/142 (28%)

Query: 196 YINYLNIILDFWKPKFLRSAFFTQAEIKTLFD--DIPAIVKAQQA-FYDDMASYKIDYSL 252
           YI  LN  L    P   ++ F+ +AE KT+ D  D   I  A +A F+D           
Sbjct: 60  YIQELNFTLS---PAEWQAKFYKEAERKTVHDNADSAGIKDADEAEFWD----------- 105

Query: 253 SVLPIIMRHIEDFKVATHAIAYQQEITDLMNKKAKDA---RILKLIKQLAEEQNGTEFLS 309
                      D+K A  A+   ++     N+K K A    + K  KQLA      +  +
Sbjct: 106 -----------DWKAAAEALKQGED-----NQKVKQAVTPELTKTAKQLA----AVQLAA 145

Query: 310 FMISIVQRIPRYMLFVKELNKY 331
             + + Q + RY     E  KY
Sbjct: 146 IALEVKQLLKRYPNVNPEAAKY 167



>EAY09004.1 on XP_808081   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 893

 Score = 29.6 bits (65), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 9/57 (15%)

Query: 582 FLSYNFLQQTWSQLLLN---------GAESFTARYGHTTTSNGQNFYIFGGRTPSGN 629
           FLS NF + TWS   L          GA   T   G T TS+G  F+      P G+
Sbjct: 504 FLSDNFSESTWSDEYLGVNATVRKKEGAAKNTRETGATKTSDGVKFHGAWAEWPVGS 560



>EAY09004.1 on XP_807431   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 940

 Score = 28.5 bits (62), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 6/67 (8%)

Query: 908 DENEDSEDEGNLEVFQINPVASNSSAWKPSAAAIKERKKMDPSRPIMEVLTELLTTPVDQ 967
           D + DS   G   +    PV  +SSA    +  +       PS P+        +TPVD 
Sbjct: 666 DSSSDSSAHGTPSI----PV--DSSAHGTPSTPVDSSAHATPSTPVDSSAHSTPSTPVDS 719

Query: 968 PAQGTPA 974
            A GTP+
Sbjct: 720 SAHGTPS 726




 Score = 26.6 bits (57), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 14/45 (31%), Positives = 20/45 (44%)

Query: 930 NSSAWKPSAAAIKERKKMDPSRPIMEVLTELLTTPVDQPAQGTPA 974
           +SSA    +  +       PS P+        +TPVD  A GTP+
Sbjct: 754 DSSAHGTPSTTVDSSAHATPSTPVDSSAHSTPSTPVDSSAHGTPS 798



>EAY09004.1 on XP_001707641  CWP3  (Others)  [Giardia duodenalis]
          Length = 247

 Score = 27.3 bits (59), Expect = 4.2,   Method: Composition-based stats.
 Identities = 12/20 (60%), Positives = 15/20 (75%)

Query: 40  ICARFKNYSERLDNNAVIGD 59
           ICA  K +S  LDNN++IGD
Sbjct: 124 ICALSKLHSLHLDNNSLIGD 143



>EAY09004.1 on XP_806228   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1204

 Score = 27.7 bits (60), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 15/45 (33%), Positives = 21/45 (46%)

Query: 930  NSSAWKPSAAAIKERKKMDPSRPIMEVLTELLTTPVDQPAQGTPA 974
            +SSA    +A +       PS P+        +TPVD  A GTP+
Sbjct: 1102 DSSAHGTPSAPVDSSAHSTPSTPVDSSAHSTPSTPVDSSAHGTPS 1146




 Score = 26.9 bits (58), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 15/46 (32%), Positives = 21/46 (45%)

Query: 930  NSSAWKPSAAAIKERKKMDPSRPIMEVLTELLTTPVDQPAQGTPAA 975
            +SSA    +  +       PS P+        +TPVD  A GTP+A
Sbjct: 1066 DSSAHSTPSTPVDSSAHSTPSTPVDSSAHGTPSTPVDSSAHGTPSA 1111



>EAY09004.1 on XP_821909   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 954

 Score = 27.3 bits (59), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 15/37 (40%), Positives = 18/37 (48%)

Query: 582 FLSYNFLQQTWSQLLLNGAESFTARYGHTTTSNGQNF 618
           FLS NF   TWS   L    +   + G T TS+G  F
Sbjct: 527 FLSGNFSDDTWSDEYLGVNATVHNKEGATKTSDGVKF 563



>EAY09004.1 on XP_816303   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 955

 Score = 27.3 bits (59), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 14/37 (37%), Positives = 18/37 (48%)

Query: 582 FLSYNFLQQTWSQLLLNGAESFTARYGHTTTSNGQNF 618
           FLS NF + TW    L    +   + G T TS+G  F
Sbjct: 526 FLSGNFSENTWRDEYLGVDATVNNKGGATNTSDGVTF 562



>EAY09004.1 on XP_001349035  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2239

 Score = 26.9 bits (58), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 10/72 (13%)

Query: 33   FFSESKFICARFKNYSERLDNNAVIGDWINELVQNNIGKYDIPETFLIGQNEENPKISIA 92
            +    + +C ++KN  ERL         + EL +N     DI      G +  N  +SI 
Sbjct: 2055 WLDRHRDMCEKWKNNHERLPK-------LKELWENETHSGDINSGIPSGNHVLNTDVSIQ 2107

Query: 93   IH---PKSKHEL 101
            IH   PK K+E 
Sbjct: 2108 IHMDNPKPKNEF 2119



>EAY09004.1 on XP_828092  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 532

 Score = 26.6 bits (57), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 6/63 (9%)

Query: 117 NGTVTQFLEEVT--KFVTIEHKFISLQSNGQDVSASTTIQELPNLAKTNGLTYNFEFTQS 174
           +G + +F+E +T  +  T EH  +S Q +G D +A  TI +     K     ++ E T+ 
Sbjct: 126 HGRIAEFIEMMTAMRGKTNEHACLSKQGDGTDRAAGETITKQQATCK----LHSEELTKH 181

Query: 175 GEE 177
            EE
Sbjct: 182 SEE 184




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09006.1 surface antigen BspA-like [Trichomonas
vaginalis G3]
         (732 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09007.1 hypothetical protein TVAG_073730 [Trichomonas
vaginalis G3]
         (177 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_814753   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.33 
XP_821146   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   1.4  
XP_001349512  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   8.6  

>EAY09007.1 on XP_814753   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 882

 Score = 28.1 bits (61), Expect = 0.33,   Method: Composition-based stats.
 Identities = 24/100 (24%), Positives = 40/100 (40%), Gaps = 15/100 (15%)

Query: 14  KKPDWRHLNIDGLVVSDAHTD--INTDFNKMTVSELQKR---------FKTDLINKINNG 62
           KK +W+  N DG+ V        +N   +   V+E Q +           + L+ K  + 
Sbjct: 73  KKSEWKDANDDGVTVESFGVPGLLNVGNDVFVVAEAQCKKDENKVFTGIASQLLTKDTSD 132

Query: 63  ELLNVIKHVRDNTYVF----PNYATISMSNVGIIRTGGDI 98
           E + V+   +D T V     P    + +S    +  GGDI
Sbjct: 133 EPMEVLNGAKDKTQVLEEGAPTSKRVDVSRPTTVVDGGDI 172



>EAY09007.1 on XP_821146   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 911

 Score = 26.2 bits (56), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 12/79 (15%)

Query: 49  KRFK---TDLINKINNGELLNVIK---------HVRDNTYVFPNYATISMSNVGIIRTGG 96
           KR K    D +++I+ GEL +  +          + D+T VFP   T +     +     
Sbjct: 214 KRIKWKDKDDVSRISVGELDSWTRLTGGGGSGIKMEDDTLVFPVEGTKNEDEKAVSLIIH 273

Query: 97  DIKDAMITFSVTNGPNPPG 115
           D+KD  +++ ++NG +  G
Sbjct: 274 DVKDTAVSWKLSNGTSDGG 292



>EAY09007.1 on XP_001349512  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2980

 Score = 23.5 bits (49), Expect = 8.6,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)

Query: 127 ELFRGRLFTSPFVTNDEESKKFSRAIKHFLLDIDQS 162
           +LF+G  F   +  N+EE+ K+++ +K+    ID S
Sbjct: 656 DLFKGYFFHVMYELNNEEA-KWNKLMKNLRTKIDSS 690




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09009.1 ankyrin repeat protein, putative [Trichomonas
vaginalis G3]
         (70 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAR87666  MIC3  (Invasion)  [Eimeria tenella]                          23   1.7  
XP_802688   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   2.8  
XP_001219197  VSG  (Establishment)  [Trypanosoma brucei]               22   5.8  
XP_001347691  PfEMP1  (Establishment)  [Plasmodium falciparum]         22   6.0  
XP_810237   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   7.6  

>EAY09009.1 on AAR87666  MIC3  (Invasion)  [Eimeria tenella]
          Length = 255

 Score = 23.1 bits (48), Expect = 1.7,   Method: Composition-based stats.
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 24 GKAPFLSACYADDFVLVKIFIELGVDANS 52
          G   FLSAC      L + F+ L  +A S
Sbjct: 8  GAVAFLSACRTQALRLSRSFLSLSAEAES 36



>EAY09009.1 on XP_802688   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 141

 Score = 22.3 bits (46), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 8/27 (29%), Positives = 16/27 (59%)

Query: 33 YADDFVLVKIFIELGVDANSKDEKGAN 59
          +++DF   ++   +G +  S  E+GAN
Sbjct: 16 HSEDFFTTEVESPMGEEEQSAPEEGAN 42



>EAY09009.1 on XP_001219197  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 345

 Score = 21.6 bits (44), Expect = 5.8,   Method: Composition-based stats.
 Identities = 7/24 (29%), Positives = 13/24 (54%)

Query: 44  IELGVDANSKDEKGANGLMRNFAC 67
           ++ G D+ +   KG   LM++  C
Sbjct: 90  LDCGQDSGNHQTKGGEALMKDLVC 113



>EAY09009.1 on XP_001347691  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2182

 Score = 21.6 bits (44), Expect = 6.0,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 8    LFLIEKGADINQRSDDGKAPFLSACYADD 36
            L++IEK   +     DGK     +CY ++
Sbjct: 1262 LYIIEKECKVEANGRDGKKNPKCSCYGEN 1290



>EAY09009.1 on XP_810237   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 922

 Score = 21.6 bits (44), Expect = 7.6,   Method: Composition-based stats.
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 2/38 (5%)

Query: 34  ADDFVLVKIFIELGVDANSK--DEKGANGLMRNFACNE 69
           ADD  L+ +  E+GVD +SK    K   GL R   C +
Sbjct: 196 ADDSGLLLVKGEVGVDESSKGIQWKDTKGLPRTPFCEQ 233




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09019.1 hypothetical protein TVAG_073850 [Trichomonas
vaginalis G3]
         (235 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_812794   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   2.9  
XP_817716   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   4.1  
XP_810496   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   5.5  

>EAY09019.1 on XP_812794   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 936

 Score = 25.8 bits (55), Expect = 2.9,   Method: Composition-based stats.
 Identities = 9/28 (32%), Positives = 17/28 (60%)

Query: 124 NDKSLLSPLEYISKKSNENSSDSNDIIS 151
           ND + L P+E + KK N+++ +    +S
Sbjct: 310 NDGTFLFPVEAVKKKENDDADEDGKTVS 337



>EAY09019.1 on XP_817716   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 948

 Score = 25.0 bits (53), Expect = 4.1,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 24/48 (50%)

Query: 101 NFDLKQNNTSNIIIQHCSTQYPKNDKSLLSPLEYISKKSNENSSDSND 148
           N+  KQ+ +   +I    +    ND +++ PLE   KK N++  +  D
Sbjct: 245 NYKDKQHESLLRLIGSGGSGVKMNDGTIVFPLEGTRKKKNQDGGNEKD 292



>EAY09019.1 on XP_810496   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 943

 Score = 24.6 bits (52), Expect = 5.5,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 24/48 (50%)

Query: 101 NFDLKQNNTSNIIIQHCSTQYPKNDKSLLSPLEYISKKSNENSSDSND 148
           N+  KQ+ +   +I    +    ND +++ PLE   KK N++  +  D
Sbjct: 228 NYKDKQHESLLRLIGGGGSGVKMNDGTIVFPLEGTRKKKNQDGGNEKD 275




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09022.1 CAMK family protein kinase [Trichomonas
vaginalis G3]
         (308 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    49   9e-08

>EAY09022.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 49.3 bits (116), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 59/121 (48%), Gaps = 3/121 (2%)

Query: 100 LSHSQLQHLIFQILTSLKVLHDYSISHGDFKPANILLDANGRV-KLSNFDLSTILNEKCP 158
           L+   +++ I+Q+L ++   H   I H D KP N+++D   ++ +L ++ L+   + +  
Sbjct: 144 LTIQDIKYYIYQLLKAMNYCHSQGIMHRDIKPHNVMIDHEKKILRLIDWGLAEFYHPEQE 203

Query: 159 ISNNYRGTLLFMAPEIFNKSGYDPIKADIWALGVTLFALVTKEYP-FYAEDQMSLMQLVS 217
            S     T  +  PE+     Y     DIW++G  L  ++ K+ P FY  D    +  ++
Sbjct: 204 YSVRV-ATRYYKGPELLVDMRYYDYSLDIWSIGCMLAGIIFKKEPFFYGHDNYDQLVKIA 262

Query: 218 K 218
           K
Sbjct: 263 K 263




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09034.1 hypothetical protein TVAG_180080 [Trichomonas
vaginalis G3]
         (422 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ABV44288   PP2C2  (Establishment)  [Toxoplasma gondii]                 29   0.49 
AAM47192  Rh4  (Adhesin)  [Plasmodium falciparum]                      26   4.5  
AAM47175  Rh4  (Adhesin)  [Plasmodium falciparum]                      26   4.7  
AAM47174  Rh4  (Adhesin)  [Plasmodium falciparum]                      26   4.7  

>EAY09034.1 on ABV44288   PP2C2  (Establishment)  [Toxoplasma gondii]
          Length = 255

 Score = 28.9 bits (63), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 5/41 (12%)

Query: 365 THEEIHHI-----DSILDLSDESPYKKDERGIIISIAALFN 400
           T +E+H         ++DL   SPY ++E GI+ + A+  N
Sbjct: 62  TEQEVHRTQEALDPEVVDLGKPSPYAEEESGILAASASRLN 102



>EAY09034.1 on AAM47192  Rh4  (Adhesin)  [Plasmodium falciparum]
          Length = 1716

 Score = 26.2 bits (56), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 3/49 (6%)

Query: 40   RFENRQWLTDLLKFNLLNVQQQQQSSFADCPASFFQLLEHKISYFASIF 88
            + +N+Q L+D+   N++  Q +   S+ +   S  QL++ +I YF  IF
Sbjct: 1152 KHKNQQILSDIE--NII-KQNEHTESYKNLDTSNIQLIKEQIKYFLQIF 1197



>EAY09034.1 on AAM47175  Rh4  (Adhesin)  [Plasmodium falciparum]
          Length = 1711

 Score = 26.2 bits (56), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 3/49 (6%)

Query: 40   RFENRQWLTDLLKFNLLNVQQQQQSSFADCPASFFQLLEHKISYFASIF 88
            + +N+Q L+D+   N++  Q +   S+ +   S  QL++ +I YF  IF
Sbjct: 1153 KHKNQQILSDIE--NII-KQNEHTESYKNLDTSNIQLIKEQIKYFLQIF 1198



>EAY09034.1 on AAM47174  Rh4  (Adhesin)  [Plasmodium falciparum]
          Length = 1711

 Score = 26.2 bits (56), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 3/49 (6%)

Query: 40   RFENRQWLTDLLKFNLLNVQQQQQSSFADCPASFFQLLEHKISYFASIF 88
            + +N+Q L+D+   N++  Q +   S+ +   S  QL++ +I YF  IF
Sbjct: 1151 KHKNQQILSDIE--NII-KQNEHTESYKNLDTSNIQLIKEQIKYFLQIF 1196




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09035.1 hypothetical protein TVAG_180090 [Trichomonas
vaginalis G3]
         (303 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_843744  VSG  (Establishment)  [Trypanosoma brucei]                  30   0.22 
XP_843745  VSG  (Establishment)  [Trypanosoma brucei]                  29   0.31 

>EAY09035.1 on XP_843744  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 366

 Score = 29.6 bits (65), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 8/54 (14%)

Query: 234 YHLRGTARQAKMIAMMRERAAHDFTEFLQTYNENLDLKEKEDYLRTAARAFQLL 287
           Y +RG  R  K I  MRE         L+ +NE  DLK+ E+  RT A A + L
Sbjct: 305 YVVRGRNRDIKNIPWMRE--------LLKVFNEMRDLKDYENDKRTLADAIEKL 350



>EAY09035.1 on XP_843745  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 366

 Score = 28.9 bits (63), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 8/54 (14%)

Query: 234 YHLRGTARQAKMIAMMRERAAHDFTEFLQTYNENLDLKEKEDYLRTAARAFQLL 287
           Y +RG  R  K I  MRE         L+ +NE  DLK+ E+  RT A A + L
Sbjct: 305 YVVRGRNRDIKNIPWMRE--------LLKVFNEMRDLKDYENDKRTLADAIEKL 350




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09037.1 hypothetical protein TVAG_180110 [Trichomonas
vaginalis G3]
         (144 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09038.1 hypothetical protein TVAG_180120 [Trichomonas
vaginalis G3]
         (307 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_628559  gp900  (Adhesin)  [Cryptosporidium parvum]                  28   1.2  
XP_001348250  Plasmepsin II  (Proteases)  [Plasmodium falciparum]      26   3.2  
XP_820186   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   9.7  

>EAY09038.1 on XP_628559  gp900  (Adhesin)  [Cryptosporidium parvum]
          Length = 1937

 Score = 27.7 bits (60), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 35/87 (40%), Gaps = 5/87 (5%)

Query: 140  IKQTFNALPDKKLVIINQRIDFDLEMHKMREM--NLSTDLLHQTD--KLVEGSRQT-IHS 194
            I +  N LP    V I+ R   D    +      N  +   +Q D  K + GS  + IH+
Sbjct: 1598 ILEALNKLPTSNEVNISPRPSSDAVPDRPTNTWWNKISGQTYQVDGKKTIPGSAASVIHT 1657

Query: 195  PFGVDLFTFRLDKLPFDPNVIPPFIMG 221
              G    T     LP DP+   PFI G
Sbjct: 1658 ALGTPTQTDPTTGLPSDPSTGLPFIPG 1684



>EAY09038.1 on XP_001348250  Plasmepsin II  (Proteases)  [Plasmodium falciparum]
          Length = 453

 Score = 25.8 bits (55), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)

Query: 235 ENTDTLTFGLEPAVYHINHVRHSFDTKDPKVYINERLRFINYGYFGSNY 283
           +N++ LT G +    H + +  +  T   K YI E + F+N G   +NY
Sbjct: 75  KNSEHLTIGFKVENAH-DRILKTIKTHKLKNYIKESVNFLNSGLTKTNY 122



>EAY09038.1 on XP_820186   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1133

 Score = 24.6 bits (52), Expect = 9.7,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 20/53 (37%), Gaps = 6/53 (11%)

Query: 54  WLASTNRSKVILYIKPDDFDPTGNIQKEIDELYGPGRVKYLGDLKSNKDGIPY 106
           WL  TNR      I      PTGN       LY   ++  L +     D +PY
Sbjct: 388 WLTDTNR------IYQVGLLPTGNSATSSSLLYANDKLYCLYEASVGSDSVPY 434




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09046.1 hypothetical protein TVAG_180200 [Trichomonas
vaginalis G3]
         (302 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001350409  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   1.3  
XP_001351514  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   4.2  
XP_001351515  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   4.3  
AAL38220  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   25   5.4  
AAL38219  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   25   5.6  
AAL38221  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   25   5.7  
AAL38218  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   25   5.7  
AAL38222  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   25   6.0  
AAM47174  Rh4  (Adhesin)  [Plasmodium falciparum]                      25   7.8  
AAM47192  Rh4  (Adhesin)  [Plasmodium falciparum]                      25   7.9  
XP_001351319  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   9.6  

>EAY09046.1 on XP_001350409  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2223

 Score = 27.3 bits (59), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 9/87 (10%)

Query: 66  LKLFMNEVESIGITDQMKIIIFQNSDVEISYDTRINGKYSMITFYIKNKSSNPINNLQVN 125
           LKL   E E  GI +Q +II F N   +  +D  IN K    TFY  ++   P     V 
Sbjct: 466 LKLLNKENECKGINEQEEIIDFSNK-CDYRFDKNINNK---GTFY-HSEYCQPCPGCGVK 520

Query: 126 FEDIPEIKVFSQKTNRSVQAGEEQKIE 152
            +D      + +K N    + +  KIE
Sbjct: 521 RKD----NQWKEKKNGDCDSDKHYKIE 543



>EAY09046.1 on XP_001351514  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2201

 Score = 25.8 bits (55), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 19/87 (21%), Positives = 38/87 (43%), Gaps = 11/87 (12%)

Query: 9    ECNLTCSEYKDFVFAQLESNSSQFAHDNIENYKMVIEKLS------NNQILAEPATKAAM 62
            +C   C +YK ++  +LE    Q      + YK  ++KL+      + +   E    ++ 
Sbjct: 1255 DCKKACRKYKKWIEKKLEEFQKQ-----KDKYKGELDKLTKDKSGGDKKFCEEIKNHSSA 1309

Query: 63   LRVLKLFMNEVESIGITDQMKIIIFQN 89
               LK   +  ++ G +DQ   + F+N
Sbjct: 1310 ANFLKELKHGKDNQGNSDQDNKLDFEN 1336



>EAY09046.1 on XP_001351515  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2181

 Score = 25.8 bits (55), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 19/87 (21%), Positives = 38/87 (43%), Gaps = 11/87 (12%)

Query: 9    ECNLTCSEYKDFVFAQLESNSSQFAHDNIENYKMVIEKLS------NNQILAEPATKAAM 62
            +C   C +YK ++  +LE    Q      + YK  ++KL+      + +   E    ++ 
Sbjct: 1235 DCKKACRKYKKWIEKKLEEFQKQ-----KDKYKGELDKLTKDKSGGDKKFCEEIKNHSSA 1289

Query: 63   LRVLKLFMNEVESIGITDQMKIIIFQN 89
               LK   +  ++ G +DQ   + F+N
Sbjct: 1290 ANFLKELKHGKDNQGNSDQDNKLDFEN 1316



>EAY09046.1 on AAL38220  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2957

 Score = 25.4 bits (54), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)

Query: 3    EKIVAEECNLTCSEYKDFVFAQLESNSSQFAHD---NIENYKMVIEKLSN 49
            EKI  E   L+    K F F QL ++SSQ   D   N+E YK  I+++ N
Sbjct: 1934 EKIKQEINTLSDVFKKPFFFIQLNTDSSQHEKDINNNVETYKNNIDEIYN 1983



>EAY09046.1 on AAL38219  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2969

 Score = 25.4 bits (54), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)

Query: 3    EKIVAEECNLTCSEYKDFVFAQLESNSSQFAHD---NIENYKMVIEKLSN 49
            EKI  E   L+    K F F QL ++SSQ   D   N+E YK  I+++ N
Sbjct: 1936 EKIKQEINTLSDVFKKPFFFIQLNTDSSQHEKDINNNVETYKNNIDEIYN 1985



>EAY09046.1 on AAL38221  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2965

 Score = 25.4 bits (54), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)

Query: 3    EKIVAEECNLTCSEYKDFVFAQLESNSSQFAHD---NIENYKMVIEKLSN 49
            EKI  E   L+    K F F QL ++SSQ   D   N+E YK  I+++ N
Sbjct: 1940 EKIKQEINTLSDVFKKPFFFIQLNTDSSQHEKDINNNVETYKNNIDEIYN 1989



>EAY09046.1 on AAL38218  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2977

 Score = 25.4 bits (54), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)

Query: 3    EKIVAEECNLTCSEYKDFVFAQLESNSSQFAHD---NIENYKMVIEKLSN 49
            EKI  E   L+    K F F QL ++SSQ   D   N+E YK  I+++ N
Sbjct: 1944 EKIKQEINTLSDVFKKPFFFIQLNTDSSQHEKDINNNVETYKNNIDEIYN 1993



>EAY09046.1 on AAL38222  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2976

 Score = 25.4 bits (54), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)

Query: 3    EKIVAEECNLTCSEYKDFVFAQLESNSSQFAHD---NIENYKMVIEKLSN 49
            EKI  E   L+    K F F QL ++SSQ   D   N+E YK  I+++ N
Sbjct: 1947 EKIKQEINTLSDVFKKPFFFIQLNTDSSQHEKDINNNVETYKNNIDEIYN 1996



>EAY09046.1 on AAM47174  Rh4  (Adhesin)  [Plasmodium falciparum]
          Length = 1711

 Score = 25.0 bits (53), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 9/21 (42%), Positives = 14/21 (66%)

Query: 1   MGEKIVAEECNLTCSEYKDFV 21
           + E I   +C+LTCS+YK  +
Sbjct: 263 VNEYINNSDCHLTCSKYKTII 283



>EAY09046.1 on AAM47192  Rh4  (Adhesin)  [Plasmodium falciparum]
          Length = 1716

 Score = 24.6 bits (52), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 9/21 (42%), Positives = 14/21 (66%)

Query: 1   MGEKIVAEECNLTCSEYKDFV 21
           + E I   +C+LTCS+YK  +
Sbjct: 263 VNEYINNSDCHLTCSKYKTII 283



>EAY09046.1 on XP_001351319  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2646

 Score = 24.6 bits (52), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 4/34 (11%)

Query: 10   CNLTCSEYKDFVFA---QLESNSSQFAHD-NIEN 39
            CN  C EYK++V     +    +++F  D N+EN
Sbjct: 1125 CNKACDEYKNYVETKQKEFRGQTTKFVRDANLEN 1158




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09063.1 AGC family protein kinase [Trichomonas
vaginalis G3]
         (383 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    58   2e-10
XP_845143  VSG  (Establishment)  [Trypanosoma brucei]                  29   0.45 
XP_846884  VSG  (Establishment)  [Trypanosoma brucei]                  25   9.5  

>EAY09063.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 57.8 bits (138), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 5/148 (3%)

Query: 126 GISYSHSFGVAHRDIKPQNILITEFPNI-KITDFGLCGIIESSQLMNGFCGSPTYCSPEC 184
            ++Y HS G+ HRDIKP N++I     I ++ D+GL       Q  +    +  Y  PE 
Sbjct: 159 AMNYCHSQGIMHRDIKPHNVMIDHEKKILRLIDWGLAEFYHPEQEYSVRVATRYYKGPEL 218

Query: 185 LTRQQYDGRLSDIWSMGVLLYTMVVGSPPWNTTSSANLLDQIFADNIQYPSHISKLCRSL 244
           L   +Y     DIWS+G +L  ++    P+      +  DQ+    I        L R  
Sbjct: 219 LVDMRYYDYSLDIWSIGCMLAGIIFKKEPF--FYGHDNYDQLVK--IAKVLGTEDLHRYF 274

Query: 245 ISSMLKINPFERITMDEIMNHPWLKIAH 272
               LK  P  +  +      PW K  H
Sbjct: 275 EKYGLKFAPAYQEILGNHSKKPWTKFVH 302



>EAY09063.1 on XP_845143  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 501

 Score = 29.3 bits (64), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)

Query: 4   FQRILPPKYLNGYLFEDFL--GKGAFSSVYKATNIQTRQKFAIKIFPKSNLKTIK 56
           +Q  LPPK  +G  +E++    K A  S+YKA   +   K   +  P+    TI+
Sbjct: 98  WQDELPPKDQHGDDWEEYWLDWKEAIRSLYKADRTKAEDKITFESLPEDVKDTIR 152



>EAY09063.1 on XP_846884  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 493

 Score = 25.0 bits (53), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 14/57 (24%), Positives = 24/57 (42%), Gaps = 4/57 (7%)

Query: 315 GIVPPFGISKSDSASNPNQITIT----KPNLPCLARNGRPRKKCTSVGPMSIHSHSM 367
           G +PP      D      +IT      +P L  +  +   + KCT+ G  S H +++
Sbjct: 161 GSIPPAMCPTEDQTETGVKITTESEKDEPKLATIKLHSNAQAKCTATGANSCHDNAL 217




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09071.1 hypothetical protein TVAG_180450 [Trichomonas
vaginalis G3]
         (302 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001349513  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   0.61 
XP_807842   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.99 
XP_809739   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.99 
XP_812613   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.1  
XP_001351563  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   3.0  
XP_001349438  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   4.2  
XP_001608785  variant erythrocyte surface antigen-1, alpha subun...    25   5.8  
XP_001609533  variant erythrocyte surface antigen-1, alpha subun...    25   5.8  
XP_001609751  variant erythrocyte surface antigen-1, alpha subun...    25   5.9  
XP_001608670  variant erythrocyte surface antigen-1, alpha subun...    25   5.9  
XP_001610196  variant erythrocyte surface antigen-1, alpha subun...    25   5.9  
XP_001609565  variant erythrocyte surface antigen-1, alpha subun...    25   5.9  
XP_001350595  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   7.0  
XP_804289   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   8.8  
AAB86482  RabA  (Invasion)  [Entamoeba histolytica]                    24   9.5  

>EAY09071.1 on XP_001349513  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2858

 Score = 28.5 bits (62), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 18/73 (24%)

Query: 151 LEDINSLKEKLANVNNIFLDTREDMRNVYLNNQNHLKSYNEC---AAKVMKGVKTVGERW 207
           L+D N LKE L               N  +NN+N L    +C      V K +K  GE W
Sbjct: 575 LKDYNKLKENL---------------NPCINNENQLPCIKDCLENCDCVEKWIKKKGEEW 619

Query: 208 EHISTRGFDDERV 220
           + I  R   D ++
Sbjct: 620 KKIKERYLKDYKI 632



>EAY09071.1 on XP_807842   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1043

 Score = 27.7 bits (60), Expect = 0.99,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 24/44 (54%)

Query: 84  YHVEYKKLMRKLEFAEELAKKDIPLDEAYESIASFYGTKCEVSR 127
           Y++   +L  KLE  +E+ K    LD A+ES +S  G   ++ R
Sbjct: 444 YNLVAVRLTEKLERIKEVVKTWKDLDSAFESCSSVSGAAVDLPR 487



>EAY09071.1 on XP_809739   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1043

 Score = 27.7 bits (60), Expect = 0.99,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 24/44 (54%)

Query: 84  YHVEYKKLMRKLEFAEELAKKDIPLDEAYESIASFYGTKCEVSR 127
           Y++   +L  KLE  +E+ K    LD A+ES +S  G   ++ R
Sbjct: 444 YNLVAVRLTEKLERIKEVVKTWKDLDSAFESCSSVSGAAVDLPR 487



>EAY09071.1 on XP_812613   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1038

 Score = 27.3 bits (59), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 24/44 (54%)

Query: 84  YHVEYKKLMRKLEFAEELAKKDIPLDEAYESIASFYGTKCEVSR 127
           Y++   +L  KLE  +E+ K    LD A+ES +S  G   ++ R
Sbjct: 439 YNLVAVRLTEKLERIKEVVKTWKDLDSAFESCSSVSGAAVDLPR 482



>EAY09071.1 on XP_001351563  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2149

 Score = 26.2 bits (56), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 43/191 (22%), Positives = 75/191 (39%), Gaps = 32/191 (16%)

Query: 101  LAKKDIPLDEAYESIASFYGTKCEVSRGLKELIKLGTEIKALSQKNNSPALEDINSLKEK 160
            + K++   D+   S+  F   K E    LK+ I    EI+AL ++      +D N +K K
Sbjct: 1368 IRKEEWECDKLCNSVVCFLKKKNENGTDLKQYI----EIRALLKRWVDNFFDDYNKIKHK 1423

Query: 161  LANVNNIFLDTREDMRNVYLNNQNHLKSYNECAAK---VMKGVKTVGERWEHISTRGFDD 217
            +++                +N+ N     N+C  K   V K ++     WE I  R F+D
Sbjct: 1424 ISHC---------------INSGNKSTCTNDCPNKCKCVRKWIEKKKNEWEEIKKR-FND 1467

Query: 218  ----ERVAFASKILELLMFYWCEANFLDQLLGKLSIFEKMMKNYDVADV---KKAVIEFQ 270
                E     S  L   +        +D ++GK+     +  + +  D    KK   E+ 
Sbjct: 1468 QYKKENNEGTSSNLNSFLETLIPQTDVDNVIGKVKTLSDLYDSNECIDTDTSKKGQHEYN 1527

Query: 271  --IKIAIYKQQ 279
              ++  +YK Q
Sbjct: 1528 DVVECLLYKLQ 1538



>EAY09071.1 on XP_001349438  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2265

 Score = 25.8 bits (55), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 176 RNVYLNNQNHLKSYNE-CAAKVMKGVKTVGERWE 208
           +N Y ++ N   S+ E C A  + GVK  G +WE
Sbjct: 485 KNSYDDDSNKTFSHTEYCQACPLCGVKRNGRKWE 518



>EAY09071.1 on XP_001608785  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 954

 Score = 25.4 bits (54), Expect = 5.8,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 6   LFANLTEIHFDLNTLKLKYYNKNTRLIESLEFNM 39
           L+AN TE HF   T+ ++ YN+    I +L + +
Sbjct: 561 LYAN-TECHFTYPTVSIQAYNQVVHYIRALFYQL 593



>EAY09071.1 on XP_001609533  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1162

 Score = 25.4 bits (54), Expect = 5.8,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 6   LFANLTEIHFDLNTLKLKYYNKNTRLIESLEFNM 39
           L+AN TE HF   T+ ++ YN+    I +L + +
Sbjct: 532 LYAN-TECHFTYPTVSIQAYNQVVHYIRALFYQL 564



>EAY09071.1 on XP_001609751  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1298

 Score = 25.4 bits (54), Expect = 5.9,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 6   LFANLTEIHFDLNTLKLKYYNKNTRLIESLEFNM 39
           L+AN TE HF   T+ ++ YN+    I +L + +
Sbjct: 530 LYAN-TECHFTYPTVSIQAYNQVVHYIRALFYQL 562



>EAY09071.1 on XP_001608670  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1320

 Score = 25.4 bits (54), Expect = 5.9,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 6   LFANLTEIHFDLNTLKLKYYNKNTRLIESLEFNM 39
           L+AN TE HF   T+ ++ YN+    I +L + +
Sbjct: 572 LYAN-TECHFTYPTVSIQAYNQVVHYIRALFYQL 604



>EAY09071.1 on XP_001610196  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1330

 Score = 25.4 bits (54), Expect = 5.9,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 6   LFANLTEIHFDLNTLKLKYYNKNTRLIESLEFNM 39
           L+AN TE HF   T+ ++ YN+    I +L + +
Sbjct: 586 LYAN-TECHFTYPTVSIQAYNQVVHYIRALFYQL 618



>EAY09071.1 on XP_001609565  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1341

 Score = 25.4 bits (54), Expect = 5.9,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 6   LFANLTEIHFDLNTLKLKYYNKNTRLIESLEFNM 39
           L+AN TE HF   T+ ++ YN+    I +L + +
Sbjct: 590 LYAN-TECHFTYPTVSIQAYNQVVHYIRALFYQL 622



>EAY09071.1 on XP_001350595  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2256

 Score = 25.0 bits (53), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 7/68 (10%)

Query: 146 NNSPALEDINSLKEKLANVNNIFLDTREDMRNVYLNNQNHLKSYNE-CAAKVMKGVKTVG 204
           NN  A +DIN  KEK+    N+     ED +N+      +   Y + C    MK  K  G
Sbjct: 454 NNEKACKDINEEKEKIDFTKNV-----EDDKNINKEGTFYHSQYCQPCPGCGMKKTKN-G 507

Query: 205 ERWEHIST 212
             WE   T
Sbjct: 508 NGWEEKDT 515



>EAY09071.1 on XP_804289   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1048

 Score = 24.6 bits (52), Expect = 8.8,   Method: Composition-based stats.
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query: 84  YHVEYKKLMRKLEFAEELAKKDIPLDEAYESIAS 117
           Y +   +L  KLE  +E+ KK   LD A+ES  S
Sbjct: 444 YSLVAVRLTEKLERIKEVVKKWKDLDSAFESCRS 477



>EAY09071.1 on AAB86482  RabA  (Invasion)  [Entamoeba histolytica]
          Length = 219

 Score = 24.3 bits (51), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 77/193 (39%), Gaps = 35/193 (18%)

Query: 5   ILFANLTEIHFDLNTLKLKYYNKNTRLIESLEFNMGGFCASFGMHLVYSIEILNKEIKLS 64
           ++  NLT +  D+   K       T LI+   F  G +   +   +   IE  +K + L 
Sbjct: 22  LIGGNLTRLIGDVGVGK-------TALIQ--RFCFGTYTEDYDATI--GIETCDKSVNLD 70

Query: 65  N-----QLLDNSKQTEDPQQLGKKYHVEYKK--LMRKLEFAEELAKKDIPLDEAYESIAS 117
                 QL D + Q E    L + Y  + K   L+ +++  E        LD  Y SI+S
Sbjct: 71  GKMYQLQLWDTAGQ-EKYHSLVRLYFKDIKGVLLVFQIDRQESFDHCKDWLDLFYSSISS 129

Query: 118 FY-------GTKCEV----SRGLKELIKL-----GTEIKALSQKNNSPALEDINSLKEKL 161
            +       G KC++    +R  KE +       G E    S K N+   E  + L   +
Sbjct: 130 GFTPPVLLVGNKCDLIGSSTRVSKESVDRFVSENGLEYIETSSKENTNVQEAFSQLLRSI 189

Query: 162 ANVNNIFLDTRED 174
            N+  IF+D  E+
Sbjct: 190 INLKPIFVDPGEE 202




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09074.1 hypothetical protein TVAG_180480 [Trichomonas
vaginalis G3]
         (556 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_806519   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   0.82 
XP_001349030  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   2.2  
XP_809961   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   8.0  

>EAY09074.1 on XP_806519   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 912

 Score = 28.9 bits (63), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 10/68 (14%)

Query: 301 ALYSIAKEKTQDALAFLNLAGYC-----KNWPQKPMMKTEYEFTKPNESLPFSVTDNEVS 355
           A+   AK+K  D L F            K WP +P+    Y FT     L  +V+ +EV 
Sbjct: 507 AVVRGAKKKASDGLTFEGQGAGAEWPVDKQWPTRPLHFANYGFT-----LAATVSIHEVP 561

Query: 356 FYRSPLSG 363
              +PL G
Sbjct: 562 TGITPLMG 569



>EAY09074.1 on XP_001349030  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2215

 Score = 27.7 bits (60), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 77/212 (36%), Gaps = 27/212 (12%)

Query: 171  YVLQEIRLTYDDFVYIANTHTLVNELELAIARGLIQSLSLDQIITFTEQFDYKLPRLMEN 230
            Y + +IR   +      NT TL  EL+  + RG I +  L Q+  F    DY+       
Sbjct: 1020 YKVDKIREEKEQQELFTNTSTLGKELQDKLERGNIPTDFLRQM--FYTLGDYR------- 1070

Query: 231  LLKILHSHEKVMKKFENVIVKHLSRYADDIEATYYYVKYLIK--ACNTKSAEQF--MPLM 286
               IL S  K  K   N I        +  E     ++   +  A    S ++       
Sbjct: 1071 --DILFSGSKDAKNGVNDIFSGDKEMKEKEEKIKGAIQTFFENGASQPPSGKRNDKHEEW 1128

Query: 287  YSTFGLHPLSAIACALY-----SIAKEKTQDALAFLNLAGYCKNWPQKPM-------MKT 334
            +   G H  + + CAL      +  +  TQ      NL    KN P+KP        ++ 
Sbjct: 1129 WKNHGEHIWNGMICALTYKDNDAKGQTPTQIQEVRDNLWDSGKNEPKKPQYQYQTAKLEE 1188

Query: 335  EYEFTKPNESLPFSVTDNEVSFYRSPLSGPFY 366
            +   TKP    P S +DN  +     +S P Y
Sbjct: 1189 KNSGTKPTNQTPSSTSDNTPTTLTDFISRPPY 1220



>EAY09074.1 on XP_809961   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 916

 Score = 25.8 bits (55), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 5/41 (12%)

Query: 323 CKNWPQKPMMKTEYEFTKPNESLPFSVTDNEVSFYRSPLSG 363
           CK WP+ P     Y FT     L  +V+ +EV    +PL G
Sbjct: 533 CKQWPKMPFHFANYGFT-----LAATVSIHEVPKGITPLMG 568




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09076.1 hypothetical protein TVAG_180500 [Trichomonas
vaginalis G3]
         (122 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351435  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   0.48 
XP_819012   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   5.5  
Q03077  Lgl2  (Adhesin)  [Entamoeba histolytica]                       23   5.9  
XP_807448   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   9.4  

>EAY09076.1 on XP_001351435  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2209

 Score = 26.6 bits (57), Expect = 0.48,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 23/48 (47%)

Query: 11  GSTLAIIAPYLLEEFIDERQYTLARAAERVFDVREGTDAEKAKTFIAK 58
           G T    A Y  E++ID ++    +  E+  +V  GT +   KT  A+
Sbjct: 386 GCTDCFFACYPYEKWIDNKKKEFLKQKEKYINVINGTSSSSRKTRAAR 433




 Score = 23.5 bits (49), Expect = 5.7,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 14/25 (56%)

Query: 36  AAERVFDVREGTDAEKAKTFIAKLR 60
           ++E  +  R G D EK K  I KLR
Sbjct: 358 SSEERYCSRNGFDCEKTKRAIGKLR 382



>EAY09076.1 on XP_819012   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 918

 Score = 23.5 bits (49), Expect = 5.5,   Method: Composition-based stats.
 Identities = 9/19 (47%), Positives = 14/19 (73%), Gaps = 1/19 (5%)

Query: 97  GKPFGYHDSITREHVHHIL 115
           G P G H+SI++E  HH++
Sbjct: 620 GNPKG-HNSISKETTHHVV 637



>EAY09076.1 on Q03077  Lgl2  (Adhesin)  [Entamoeba histolytica]
          Length = 288

 Score = 23.1 bits (48), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 11/27 (40%), Positives = 14/27 (51%)

Query: 24  EFIDERQYTLARAAERVFDVREGTDAE 50
           EF   R YT     +RV D+R G + E
Sbjct: 141 EFAPYRMYTSYAIPKRVHDIRGGANEE 167



>EAY09076.1 on XP_807448   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 831

 Score = 22.7 bits (47), Expect = 9.4,   Method: Composition-based stats.
 Identities = 10/26 (38%), Positives = 15/26 (57%)

Query: 23  EEFIDERQYTLARAAERVFDVREGTD 48
           E+  DER + +AR A   +DV   T+
Sbjct: 306 EDQYDERLFMMARCAGGYYDVYRSTE 331




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09080.1 Phosphoribulokinase / Uridine kinase family
protein [Trichomonas vaginalis G3]
         (524 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_846885  VSG  (Establishment)  [Trypanosoma brucei]                  27   2.5  

>EAY09080.1 on XP_846885  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 525

 Score = 27.3 bits (59), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 9/91 (9%)

Query: 292 DIPYGEDGLQDFESIDALNVALLGERVTKMLKGETVPTRRFDFKSGRGSDDA----TKPM 347
           ++P  +    D++ I  LN++L G    K       P +R  +K    ++D+     +P 
Sbjct: 47  ELPETQQATTDYQEIQKLNISLSGTDWRKQFDKTGTPPKRAAYKPSGATEDSLRKERRPY 106

Query: 348 ALHDKEFLIIEGIHGLNPE-LLQSLGPDNVT 377
            ++ ++   IE   G  PE +L+S G D  T
Sbjct: 107 WINAEDE--IETDKG--PEKILRSAGADGAT 133




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09081.1 Kelch motif family protein [Trichomonas
vaginalis G3]
         (383 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_810496   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   4.2  
XP_965997  PfEMP1  (Establishment)  [Plasmodium falciparum]            26   4.9  

>EAY09081.1 on XP_810496   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 943

 Score = 26.2 bits (56), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 2/34 (5%)

Query: 258 EPPSTVMGAGMASVEN--LLFFFGGKSSSKWTLV 289
           E P +VMGA M+  EN  LL         KWTL+
Sbjct: 601 EGPISVMGAKMSDAENPVLLGLSYNNREKKWTLL 634



>EAY09081.1 on XP_965997  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2879

 Score = 25.8 bits (55), Expect = 4.9,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 4/58 (6%)

Query: 170  RSTPITTMYNGRYFIWGGYNGQMLSTLHALDVSTRVWQHYPQDIVGRTAIPGCQIGDK 227
            R+  +   YN  YF+W  YN    +   A+  S   +  Y  DI+  T I    + DK
Sbjct: 2161 RNAVLNAAYNEAYFLWTVYNKDSTTAFEAIKYS---FADY-GDIIKGTDIMESSLSDK 2214




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09082.1 hypothetical protein TVAG_180570 [Trichomonas
vaginalis G3]
         (5481 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_966305  PfEMP1  (Establishment)  [Plasmodium falciparum]            32   1.5  
XP_815706   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           32   1.7  
XP_815707   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           32   1.7  
XP_818270   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   3.4  
XP_810496   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   3.9  
XP_818470   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   4.8  

>EAY09082.1 on XP_966305  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3954

 Score = 32.0 bits (71), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 61/166 (36%), Gaps = 31/166 (18%)

Query: 4958 RRTTRSLNRMIDSLIDMLEDAETPQWTEKPKSAIDLAKLEVLKALTSTIQVL-------- 5009
            + T  S+N  ++    M E      W  K K+  D  K + +    + I  L        
Sbjct: 2017 KGTYNSINANLNCRDCMKECRNYKTWIVKKKNEYDKQKSKYVNEHENVISFLNKQSYKQL 2076

Query: 5010 MGAVAAHNSAKIPETFAVSLQKCMPQLTQSLNDLAKRADEIEKPNTDKNAYIAFKGDVGT 5069
               +  ++SA     F  SL  C P                +K N DKN  + FK    T
Sbjct: 2077 YENIKPYSSAA---DFFTSLNHCKP----------------DKANDDKNNKLNFKNPHET 2117

Query: 5070 FTHSINDLTNNLNNISMSGLLSKLLEVASSSRNTLTSLNRLTDVEI 5115
            F+ S       LN +   G      + A++S N LT+L   TD +I
Sbjct: 2118 FSPSTYCKACPLNGVICRG----RSQCAANSENNLTNLGESTDFDI 2159



>EAY09082.1 on XP_815706   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 907

 Score = 31.6 bits (70), Expect = 1.7,   Method: Composition-based stats.
 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 2/61 (3%)

Query: 4668 PVDASTLLQVMPQLCAAAIRVVSTLPESARKLIGCTPTDLAIMSARVSTTAASLSDPKAS 4727
            P  A+T   V P    AA     T+P  A    G  PTD   +SA    +  +LS+P AS
Sbjct: 701  PAAAATSSSVEPLTTPAAKNTQPTVPSPATA--GPQPTDQKSLSASSVPSGGALSEPAAS 758

Query: 4728 Q 4728
            +
Sbjct: 759  R 759



>EAY09082.1 on XP_815707   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 907

 Score = 31.6 bits (70), Expect = 1.7,   Method: Composition-based stats.
 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 2/61 (3%)

Query: 4668 PVDASTLLQVMPQLCAAAIRVVSTLPESARKLIGCTPTDLAIMSARVSTTAASLSDPKAS 4727
            P  A+T   V P    AA     T+P  A    G  PTD   +SA    +  +LS+P AS
Sbjct: 701  PAAAATSSSVEPLTTPAAKNTQPTVPSPATA--GPQPTDQKSLSASSVPSGGALSEPAAS 758

Query: 4728 Q 4728
            +
Sbjct: 759  R 759



>EAY09082.1 on XP_818270   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 380

 Score = 30.4 bits (67), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 17/40 (42%), Positives = 19/40 (47%)

Query: 4227 TTMISSMTNALTPASGTELYLAPASSGINNSFTKNDMVHN 4266
            T +I   T     + GT LYLAPAS GI  S    D   N
Sbjct: 281  TALICYWTRPNKKSLGTPLYLAPASQGILTSGGPGDTAPN 320



>EAY09082.1 on XP_810496   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 943

 Score = 30.4 bits (67), Expect = 3.9,   Method: Composition-based stats.
 Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 17/100 (17%)

Query: 4015 PKAAKFARTEEGMNVLRQNIPQHDLIQIQQGI-----AQ--------QMGFASLPESLKI 4061
            PK       EEG++V    +P   L+++  G+     AQ        +  F  +   L  
Sbjct: 73   PKYQLEDANEEGVSVKSLGVP--GLLKVGSGVFAVAEAQCKKNGEGGEDTFTGIASQLLT 130

Query: 4062 IQSSMSPEEVLLQARVINLAIDILT--KNADKLNPENMTQ 4099
            I++  +PEEVL +ARVI +  ++ T  K  D   P  + Q
Sbjct: 131  IKNDNTPEEVLTKARVIRVLEEVATTSKEVDVSRPTTVVQ 170



>EAY09082.1 on XP_818470   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 868

 Score = 30.0 bits (66), Expect = 4.8,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 49/129 (37%)

Query: 5110 LTDVEIEEPDLEAAEMLPQHFTMPPVPSDINATLAEQAQQLTKLANAAIDQEKAFFTAAA 5169
            +T+V +    L  +E+       PP+PS +N  +A  A Q T   +    QE    ++ A
Sbjct: 717  VTNVLLYNRPLTFSEITALKPNKPPIPSPVNTPIAGTAIQSTPGGSHQTKQESLMGSSGA 776

Query: 5170 AKDNKKTATAMVNYAKAMKAAVEQILRASATTTTLSNQNMLTTGASNIVNSFESLLTALR 5229
              +          +A+  +     +  +    +  +N +  T   S +V S   L   L 
Sbjct: 777  NGETAGRTNGQGIHAQDKEVNATTLSSSLGNLSQGNNTDAGTMRESGMVPSLFLLPLGLW 836

Query: 5230 NRFLLRGDW 5238
                LR DW
Sbjct: 837  GFAALRSDW 845




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09086.1 surface antigen BspA-like [Trichomonas
vaginalis G3]
         (631 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_808213   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   4.1  

>EAY09086.1 on XP_808213   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 819

 Score = 26.9 bits (58), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 9/63 (14%)

Query: 184 QSSAFENCLNLTEVNFGNTALKRIHSSCFNKCKRLTSVVFSRN---LTHIYKYAFNGTAI 240
           +SS  E C + T V  G   +K++H S      R T+VV   +   L   Y + + G A 
Sbjct: 153 RSSGGEKCPSQTAVLAGTQRVKKVHVS------RPTTVVQGSDIYMLAGNYSWTYEGKAD 206

Query: 241 KIF 243
            +F
Sbjct: 207 SVF 209




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09094.1 LIM domain containing protein [Trichomonas
vaginalis G3]
         (619 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001349737  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   4.9  
XP_805897   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   7.3  
XP_808562   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   7.7  

>EAY09094.1 on XP_001349737  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2199

 Score = 26.6 bits (57), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)

Query: 49   SPSKHVDSKVIEVAPKKIK--NGGMPSLLVPGEDYDNPTQFSESSHSSWIDEANG 101
            +  K  D   I V P++ +   GG+  L   G   ++P   SESS +S + + NG
Sbjct: 964  ATGKSGDKGAICVPPRRRRLYVGGLTKLTSAGTSSESPQGGSESSRASDVSQGNG 1018



>EAY09094.1 on XP_805897   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 755

 Score = 26.2 bits (56), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 15/63 (23%)

Query: 1   MSQGQSLLIPAQEDNNNDDYE---YYSDSGSYEYYSSSESKPENKKLLGQKSPSKHVDSK 57
           + +G +L+ P    ++NDDY    Y +DSG+            N  L    SP+K  +S+
Sbjct: 279 LMEGGTLVFPVVAFSDNDDYSMIIYSTDSGA------------NWMLSNGTSPAKCSNSR 326

Query: 58  VIE 60
           V E
Sbjct: 327 VTE 329



>EAY09094.1 on XP_808562   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 755

 Score = 26.2 bits (56), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 15/63 (23%)

Query: 1   MSQGQSLLIPAQEDNNNDDYE---YYSDSGSYEYYSSSESKPENKKLLGQKSPSKHVDSK 57
           + +G +L+ P    ++NDDY    Y +DSG+            N  L    SP+K  +S+
Sbjct: 279 LMEGGTLVFPVVAFSDNDDYSMIIYSTDSGA------------NWMLSNGTSPAKCSNSR 326

Query: 58  VIE 60
           V E
Sbjct: 327 VTE 329




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09100.1 hypothetical protein TVAG_230600 [Trichomonas
vaginalis G3]
         (630 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAS38514  CP65  (Cysteine protease)  [Trichomonas vaginalis]           28   1.1  
XP_001352242  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   3.4  
AAN16379  MIC11  (Others)  [Toxoplasma gondii]                         26   5.2  

>EAY09100.1 on AAS38514  CP65  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 206

 Score = 28.1 bits (61), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)

Query: 78  YPTSLGYDAILYPQIEKTRAVISFLLEKVPRSNNDVAKSVAVTSPSALAIKAAQDEF 134
           YP +  Y   L+   +    ++S++   V    ND+A  ++   P+A+AI A+   F
Sbjct: 109 YPYTAYYYDCLFDTDKAVSNIVSYI-NVVEGDENDLATKISTNGPAAVAIDASHYSF 164



>EAY09100.1 on XP_001352242  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2264

 Score = 27.3 bits (59), Expect = 3.4,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 7/56 (12%)

Query: 329 EKQIREEQSKEMVEIRELINRTESSAAEIESQ-------IESNKDEIKRINELLET 377
           E  + EE+++E+  IRE+I +     A    Q       I+  KDE K+  +  ET
Sbjct: 753 ENSLDEEEAEELKYIREIIEKKNQEPAGANGQKTIMDKLIDYEKDEAKKCKDCQET 808



>EAY09100.1 on AAN16379  MIC11  (Others)  [Toxoplasma gondii]
          Length = 204

 Score = 26.2 bits (56), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 2/58 (3%)

Query: 410 QRDFVDSMASLLEIARE--FEPKRSALINEYRSLSTAIRTRTDDYQRQMTKLAKLKRQ 465
           +R FVD++ +L + A +   EP ++AL++  R +   I+    D  RQ  + A+ K Q
Sbjct: 145 ERKFVDTLKTLAKGALKTFVEPMKAALVDGIRPMLPKIKEVAIDVFRQACEHAEEKLQ 202




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09109.1 hypothetical protein TVAG_230690 [Trichomonas
vaginalis G3]
         (114 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_829782  VSG  (Establishment)  [Trypanosoma brucei]                  26   0.66 

>EAY09109.1 on XP_829782  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 497

 Score = 25.8 bits (55), Expect = 0.66,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 13/74 (17%)

Query: 13  GKENHSRLQQGVRSLDKQRIPSDLENSTAYNELVNHRKFTHAVMKVIAVKGGNYLAMRFD 72
           GK  ++   Q  RSL  Q +  D   STA    VN        +KV  + GG    ++ +
Sbjct: 325 GKVTNTMADQAARSLIGQAVKDDNAASTARVNQVNK-------LKVKKIDGGKPKEVKIE 377

Query: 73  TEAERKMIRAPPEV 86
           T      +  PPE+
Sbjct: 378 T------LTDPPEI 385




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09111.1 surface antigen BspA-like [Trichomonas
vaginalis G3]
         (1213 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09114.1 hypothetical protein TVAG_230740 [Trichomonas
vaginalis G3]
         (766 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAL15422  MSA-2a2  (Invasion)  [Babesia bovis]                         30   0.50 
ABA06473  MSA-2b  (Invasion)  [Babesia bovis]                          30   0.54 
XP_829779  VSG  (Establishment)  [Trypanosoma brucei]                  28   2.0  
ABA06451  MSA-2a2  (Invasion)  [Babesia bovis]                         28   2.0  
AAL15423  MSA-2b  (Invasion)  [Babesia bovis]                          28   2.0  
AAB86482  RabA  (Invasion)  [Entamoeba histolytica]                    27   2.6  
XP_001352170  MSP1  (Invasion)  [Plasmodium falciparum]                27   3.7  
AAM45253  BAEBL/EBP2  (Adhesin)  [Plasmodium falciparum]               27   6.7  
XP_817333   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   6.8  
AAM45255  BAEBL/EBP2  (Adhesin)  [Plasmodium falciparum]               27   6.8  
AAM45250  BAEBL/EBP2  (Adhesin)  [Plasmodium falciparum]               27   7.0  
AAM45258  BAEBL/EBP2  (Adhesin)  [Plasmodium falciparum]               27   7.1  
AAL23761  BAEBL/EBP2  (Adhesin)  [Plasmodium falciparum]               27   7.1  
XP_001349030  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   7.6  

>EAY09114.1 on AAL15422  MSA-2a2  (Invasion)  [Babesia bovis]
          Length = 292

 Score = 29.6 bits (65), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 19/174 (10%)

Query: 385 VSSLLLANMKQQEQLQRMVDQVEQREEILQSIREIGVPPEKAAKIVLKMQEEIDNLKKTV 444
           +S+ L   MKQ     + +   E +E + +  +E+ +P + +   +    E +D+ K+ V
Sbjct: 29  LSTTLHDEMKQVANYVKFLTNDENKESLEEKFKEVDMPSDNSLDAINAFVEILDSFKEKV 88

Query: 445 KENEQIIQTNKVEFENLEEQ---------LEKLGEEKTKLTE-NLF---NTENVLSDFRT 491
                +   N V F+NL+ Q         L ++   K  L+E N F   N + +L+D   
Sbjct: 89  PFKTSLFD-NSV-FDNLKYQDTDEIFKSLLLRVPLIKKMLSEFNAFLNDNPQRLLAD--- 143

Query: 492 KNNELQKELENRITESDNMKKEYTVVKDQNKDLQTEIASQKKLYEVLSNESEEL 545
           KN E+ K  +  I+  D   K+YT +     D     +   +LY+ L NE +EL
Sbjct: 144 KNGEVTKYYKKHISAKDANVKDYTFLVKFCNDFLDSKSPFMRLYKHL-NEYDEL 196



>EAY09114.1 on ABA06473  MSA-2b  (Invasion)  [Babesia bovis]
          Length = 316

 Score = 29.6 bits (65), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 92/177 (51%), Gaps = 25/177 (14%)

Query: 385 VSSLLLANMKQQEQLQRMVDQVEQREEILQSIREIGVPPE------KAAK-IVLKMQEEI 437
           +S+ L   MKQ     + +   E +E + +  +E+ +P +      KA K I++ ++EEI
Sbjct: 29  LSTTLHDEMKQVANYVKFLTNDENKESLEEKFKEVDMPSDCSRDALKALKDILVVLKEEI 88

Query: 438 DNLKKTVKENEQI----IQTNKVEFENLEEQLEKLGEEKTKLTE-NLF---NTENVLSDF 489
              + ++ +NE +    IQ     F++L   LE++   KT LTE N F   N + +L+D 
Sbjct: 89  P-FETSLFDNEVLRELEIQDQDQIFKSL---LERVPLIKTMLTEFNAFLNDNPQRLLAD- 143

Query: 490 RTKNNELQKELENRITESDNMKKEY-TVVKDQNKDLQTEIASQKKLYEVLSNESEEL 545
             KN E+ K  +  I+  D   K+Y T+VK  N  L ++ +   +LY+ L NE +EL
Sbjct: 144 --KNGEVTKYYKKHISAKDANVKDYKTMVKFCNDFLDSK-SPFMRLYKHL-NEYDEL 196



>EAY09114.1 on XP_829779  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 486

 Score = 28.1 bits (61), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 35/152 (23%), Positives = 61/152 (40%), Gaps = 19/152 (12%)

Query: 479 LFNTENVLSDFRTKNNELQKE-----LENRITESDNMKKEYTVVKDQNKDLQTEIASQ-- 531
           + + E  +S  R + +EL  +     L      S+    +YT +  Q K+ + E  ++  
Sbjct: 43  IMHFEGQISQARQRASELSDDYSLLTLAAACDPSETKAAQYTAIAAQTKEAEYEQRAELT 102

Query: 532 ------KKLYEVLSNESEELKSALALKKKEFADLDVRMRTAREAVKAKVE---DHQQRLK 582
                 K L + L + +E+ +   AL   E A L     TA +  +  V    D Q  + 
Sbjct: 103 KHEQAIKGLLDTLKSRAEQTR---ALLHAEHAKLTPGTATASQTSQPGVSTNSDEQCTVP 159

Query: 583 DLEEEHCIKMCQMKKNYQNELDAAVAEAATIK 614
             +       C  +    + +DAAVAE  T+K
Sbjct: 160 TTQPSAKPDTCDTEAGSGDHVDAAVAELPTLK 191



>EAY09114.1 on ABA06451  MSA-2a2  (Invasion)  [Babesia bovis]
          Length = 287

 Score = 28.1 bits (61), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 9/87 (10%)

Query: 465 LEKLGEEKTKLTE-NLF---NTENVLSDFRTKNNELQKELENRITESDNMKKEYT-VVKD 519
           LE++   KT LTE N F   N + +L+D   KN E+ K  +  I+  D   K+YT +VK 
Sbjct: 116 LERVPLIKTMLTEFNAFLNDNPQRLLAD---KNGEVTKYYKKHISAKDANVKDYTFLVKF 172

Query: 520 QNKDLQTEIASQKKLYEVLSNESEELK 546
            N  L +E +   K+Y+  +   E LK
Sbjct: 173 CNDYLDSE-SPFMKMYKAFNTYEELLK 198



>EAY09114.1 on AAL15423  MSA-2b  (Invasion)  [Babesia bovis]
          Length = 287

 Score = 28.1 bits (61), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 9/87 (10%)

Query: 465 LEKLGEEKTKLTE-NLF---NTENVLSDFRTKNNELQKELENRITESDNMKKEYT-VVKD 519
           LE++   KT LTE N F   N + +L+D   KN E+ K  +  I+  D   K+YT +VK 
Sbjct: 116 LERVPLIKTMLTEFNAFLNDNPQRLLAD---KNGEVTKYYKKHISAKDANVKDYTFLVKF 172

Query: 520 QNKDLQTEIASQKKLYEVLSNESEELK 546
            N  L +E +   K+Y+  +   E LK
Sbjct: 173 CNDYLDSE-SPFMKMYKAFNTYEELLK 198



>EAY09114.1 on AAB86482  RabA  (Invasion)  [Entamoeba histolytica]
          Length = 219

 Score = 27.3 bits (59), Expect = 2.6,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 6/55 (10%)

Query: 1   MANICPICGLKTLHSVIDRATVD---TSNIVDYVASSSQLNTNIQNSLQNMINNV 52
           + N C + G  T    + + +VD   + N ++Y+ +SS+ NTN+Q +   ++ ++
Sbjct: 138 VGNKCDLIGSSTR---VSKESVDRFVSENGLEYIETSSKENTNVQEAFSQLLRSI 189



>EAY09114.1 on XP_001352170  MSP1  (Invasion)  [Plasmodium falciparum]
          Length = 1720

 Score = 27.3 bits (59), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 2/46 (4%)

Query: 428 KIVLKMQEEIDNLKKTVKENEQIIQTNKVEFENLEEQLEKLGEEKT 473
           K+V   ++ +DN+K  V + E  I+ NK    N+ E +E  G +KT
Sbjct: 234 KLVFGYRKPLDNIKDNVGKMEDYIKKNKTTIANINELIE--GSKKT 277



>EAY09114.1 on AAM45253  BAEBL/EBP2  (Adhesin)  [Plasmodium falciparum]
          Length = 616

 Score = 26.6 bits (57), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 15/112 (13%)

Query: 129 RQLISTIEKLKAEQQSKDQKYNLMKEKLKKYKNLVEESKTEISQDLMQPIDDLNHQ---- 184
           ++ I + E  K E + KD   N  K K  +YK  ++  K+E  + + +   D N +    
Sbjct: 495 KEKIYSFESFKVECKKKDCDENTCKNKCSEYKKWIDLKKSEYEKQVDKYTKDKNKKMYDN 554

Query: 185 ISKLKIKIANI-----------TSENDRIMLENQQLSRQLAAKSNEIQSQNE 225
           I ++K K AN+            + +D+I  E+      +  K +EI+  NE
Sbjct: 555 IDEVKNKEANVYLKEKSKECKDVNFDDKIFNESPNEYEDMCKKCDEIKYLNE 606



>EAY09114.1 on XP_817333   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1037

 Score = 26.6 bits (57), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 15/67 (22%)

Query: 110 YKSLALHKENDQYE-----INDQNRQLISTIEKLKAEQQSKDQKYNL----MKEKLKKYK 160
           Y    + +END        I D N++LIS  E        KD+KYNL    + EKL++ +
Sbjct: 399 YDVGPVSRENDDAAASSLLIKDNNKELISLYE------NKKDEKYNLVAVRLTEKLERIQ 452

Query: 161 NLVEESK 167
            +V+  K
Sbjct: 453 EVVKTWK 459



>EAY09114.1 on AAM45255  BAEBL/EBP2  (Adhesin)  [Plasmodium falciparum]
          Length = 616

 Score = 26.6 bits (57), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 15/112 (13%)

Query: 129 RQLISTIEKLKAEQQSKDQKYNLMKEKLKKYKNLVEESKTEISQDLMQPIDDLNHQ---- 184
           ++ I + E  K E + KD   N  K K  +YK  ++  K+E  + + +   D N +    
Sbjct: 495 KEKIYSFESFKVECKKKDCDENTCKNKCSEYKKWIDLKKSEYEKQVDKYTKDKNKKMYDN 554

Query: 185 ISKLKIKIANI-----------TSENDRIMLENQQLSRQLAAKSNEIQSQNE 225
           I ++K K AN+            + +D+I  E+      +  K +EI+  NE
Sbjct: 555 IDEVKNKEANVYLKEKSKECKDVNFDDKIFNESPNEYEDMCKKCDEIKYLNE 606



>EAY09114.1 on AAM45250  BAEBL/EBP2  (Adhesin)  [Plasmodium falciparum]
          Length = 616

 Score = 26.6 bits (57), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 15/112 (13%)

Query: 129 RQLISTIEKLKAEQQSKDQKYNLMKEKLKKYKNLVEESKTEISQDLMQPIDDLNHQ---- 184
           ++ I + E  K E + KD   N  K K  +YK  ++  K+E  + + +   D N +    
Sbjct: 495 KEKIYSFESFKVECKKKDCDENTCKNKCSEYKKWIDLKKSEYEKQVDKYTKDKNKKMYDN 554

Query: 185 ISKLKIKIANI-----------TSENDRIMLENQQLSRQLAAKSNEIQSQNE 225
           I ++K K AN+            + +D+I  E+      +  K +EI+  NE
Sbjct: 555 IDEVKNKEANVYLKEKSKECKDVNFDDKIFNESPNEYEDMCKKCDEIKYLNE 606



>EAY09114.1 on AAM45258  BAEBL/EBP2  (Adhesin)  [Plasmodium falciparum]
          Length = 616

 Score = 26.6 bits (57), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 15/112 (13%)

Query: 129 RQLISTIEKLKAEQQSKDQKYNLMKEKLKKYKNLVEESKTEISQDLMQPIDDLNHQ---- 184
           ++ I + E  K E + KD   N  K K  +YK  ++  K+E  + + +   D N +    
Sbjct: 495 KEKIYSFESFKVECKKKDCDENTCKNKCSEYKKWIDLKKSEYEKQVDKYTKDKNKKMYDN 554

Query: 185 ISKLKIKIANI-----------TSENDRIMLENQQLSRQLAAKSNEIQSQNE 225
           I ++K K AN+            + +D+I  E+      +  K +EI+  NE
Sbjct: 555 IDEVKNKEANVYLKEKSKECKDVNFDDKIFNESPNEYEDMCKKCDEIKYLNE 606



>EAY09114.1 on AAL23761  BAEBL/EBP2  (Adhesin)  [Plasmodium falciparum]
          Length = 616

 Score = 26.6 bits (57), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 15/112 (13%)

Query: 129 RQLISTIEKLKAEQQSKDQKYNLMKEKLKKYKNLVEESKTEISQDLMQPIDDLNHQ---- 184
           ++ I + E  K E + KD   N  K K  +YK  ++  K+E  + + +   D N +    
Sbjct: 495 KEKIYSFESFKVECKKKDCDENTCKNKCSEYKKWIDLKKSEYEKQVDKYTKDKNKKMYDN 554

Query: 185 ISKLKIKIANI-----------TSENDRIMLENQQLSRQLAAKSNEIQSQNE 225
           I ++K K AN+            + +D+I  E+      +  K +EI+  NE
Sbjct: 555 IDEVKNKEANVYLKEKSKECKDVNFDDKIFNESPNEYEDMCKKCDEIKYLNE 606



>EAY09114.1 on XP_001349030  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2215

 Score = 26.6 bits (57), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 13/28 (46%), Positives = 17/28 (60%)

Query: 132  ISTIEKLKAEQQSKDQKYNLMKEKLKKY 159
            I T+EK     Q  D+KY  MKE LK++
Sbjct: 1462 ICTLEKKDTNGQEGDKKYITMKELLKRW 1489




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09118.1 hypothetical protein TVAG_230780 [Trichomonas
vaginalis G3]
         (117 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_807842   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   0.25 
XP_809739   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   0.25 
XP_812751   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   0.26 
XP_812613   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   0.33 
XP_808432   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   0.44 
XP_805896   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   0.46 
XP_803132   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   0.51 
XP_805548   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   0.64 
XP_818848   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   0.71 
XP_806381   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   1.3  
XP_808758   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   1.3  
XP_804902   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   1.5  
XP_817719   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   1.5  
XP_803951   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   2.1  
XP_811309   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   2.3  
XP_820184   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   2.3  
XP_812956   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   2.3  
XP_818963   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   2.3  
XP_812615   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   2.4  
XP_812620   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   2.8  
XP_805883   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   2.8  
XP_818394   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   2.9  
XP_810068   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   3.1  
XP_819381   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   3.1  
XP_812720   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   3.1  
XP_815749   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   3.1  
XP_808156   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   3.1  
XP_816853   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   3.2  
XP_802557   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   3.7  
XP_806744   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   3.7  
XP_804223   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   4.0  
XP_808062   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   4.6  
XP_805204   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   5.9  
XP_804686   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   6.0  
XP_817333   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   8.3  
XP_814899   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   8.8  
XP_807986   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   9.0  
XP_813616   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   9.8  
XP_804289   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   9.9  

>EAY09118.1 on XP_807842   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1043

 Score = 27.3 bits (59), Expect = 0.25,   Method: Composition-based stats.
 Identities = 14/33 (42%), Positives = 20/33 (60%)

Query: 50  KLERDKKLTKTYKDFDIPAEEVASLMEKLVNNP 82
           KLER K++ KT+KD D   E  +S+    V+ P
Sbjct: 454 KLERIKEVVKTWKDLDSAFESCSSVSGAAVDLP 486



>EAY09118.1 on XP_809739   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1043

 Score = 27.3 bits (59), Expect = 0.25,   Method: Composition-based stats.
 Identities = 14/33 (42%), Positives = 20/33 (60%)

Query: 50  KLERDKKLTKTYKDFDIPAEEVASLMEKLVNNP 82
           KLER K++ KT+KD D   E  +S+    V+ P
Sbjct: 454 KLERIKEVVKTWKDLDSAFESCSSVSGAAVDLP 486



>EAY09118.1 on XP_812751   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 952

 Score = 26.9 bits (58), Expect = 0.26,   Method: Composition-based stats.
 Identities = 14/33 (42%), Positives = 20/33 (60%)

Query: 50  KLERDKKLTKTYKDFDIPAEEVASLMEKLVNNP 82
           KLER K++ KT+KD D   E  +S+    V+ P
Sbjct: 449 KLERIKEVVKTWKDLDSALESCSSVSGAAVDLP 481



>EAY09118.1 on XP_812613   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1038

 Score = 26.9 bits (58), Expect = 0.33,   Method: Composition-based stats.
 Identities = 14/33 (42%), Positives = 20/33 (60%)

Query: 50  KLERDKKLTKTYKDFDIPAEEVASLMEKLVNNP 82
           KLER K++ KT+KD D   E  +S+    V+ P
Sbjct: 449 KLERIKEVVKTWKDLDSAFESCSSVSGAAVDLP 481



>EAY09118.1 on XP_808432   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 831

 Score = 26.6 bits (57), Expect = 0.44,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 4/35 (11%)

Query: 50  KLERDKKLTKTYKDFD----IPAEEVASLMEKLVN 80
           +LER K++ KT+KD D    +P E +   + + +N
Sbjct: 448 QLERIKEVVKTWKDLDSALRVPTEGLVGFLSRTLN 482



>EAY09118.1 on XP_805896   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 692

 Score = 26.2 bits (56), Expect = 0.46,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 4/35 (11%)

Query: 50  KLERDKKLTKTYKDFD----IPAEEVASLMEKLVN 80
           +LER K + KT+KD D    +P E +   + + +N
Sbjct: 450 QLERVKSVVKTWKDLDSALRVPTEGLVGFLSRTLN 484



>EAY09118.1 on XP_803132   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 721

 Score = 26.2 bits (56), Expect = 0.51,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 4/35 (11%)

Query: 50  KLERDKKLTKTYKDFD----IPAEEVASLMEKLVN 80
           +LER K + KT+KD D    +P E +   + + +N
Sbjct: 450 QLERVKSVVKTWKDLDSALRVPTEGLVGFLSRTLN 484



>EAY09118.1 on XP_805548   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1044

 Score = 25.8 bits (55), Expect = 0.64,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 19/33 (57%)

Query: 50  KLERDKKLTKTYKDFDIPAEEVASLMEKLVNNP 82
           KLER KK+ KT+KD D   +  +S+     + P
Sbjct: 454 KLERIKKVVKTWKDLDSALQSCSSVSSGTFDLP 486



>EAY09118.1 on XP_818848   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1053

 Score = 25.8 bits (55), Expect = 0.71,   Method: Composition-based stats.
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 3/37 (8%)

Query: 50  KLERDKKLTKTYKDFDIPAEEVASLMEKLVNNPDAEK 86
           KLER KK+ KT+KD D   +   S+      N DA K
Sbjct: 454 KLERIKKVVKTWKDLDSALQSCRSVSS---GNVDAHK 487



>EAY09118.1 on XP_806381   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1045

 Score = 25.0 bits (53), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/16 (68%), Positives = 13/16 (81%)

Query: 50  KLERDKKLTKTYKDFD 65
           KLER KK+ KT+KD D
Sbjct: 450 KLERIKKVVKTWKDLD 465



>EAY09118.1 on XP_808758   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 823

 Score = 25.0 bits (53), Expect = 1.3,   Method: Composition-based stats.
 Identities = 10/16 (62%), Positives = 13/16 (81%)

Query: 50  KLERDKKLTKTYKDFD 65
           KLER K++ KT+KD D
Sbjct: 447 KLERIKEVVKTWKDLD 462



>EAY09118.1 on XP_804902   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1042

 Score = 25.0 bits (53), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/31 (38%), Positives = 19/31 (61%)

Query: 50  KLERDKKLTKTYKDFDIPAEEVASLMEKLVN 80
           KLER K++ KT+KD D   +  +S+    V+
Sbjct: 449 KLERVKEVVKTWKDLDSALQSCSSVSSGTVD 479



>EAY09118.1 on XP_817719   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1053

 Score = 25.0 bits (53), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 19/33 (57%)

Query: 50  KLERDKKLTKTYKDFDIPAEEVASLMEKLVNNP 82
           KLER K++ KT+KD D   +   S+    V+ P
Sbjct: 449 KLERIKEVVKTWKDLDSALKTCRSVSSGTVDLP 481



>EAY09118.1 on XP_803951   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 818

 Score = 24.6 bits (52), Expect = 2.1,   Method: Composition-based stats.
 Identities = 10/16 (62%), Positives = 13/16 (81%)

Query: 50  KLERDKKLTKTYKDFD 65
           KLER K++ KT+KD D
Sbjct: 449 KLERVKEVVKTWKDLD 464



>EAY09118.1 on XP_811309   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1033

 Score = 24.3 bits (51), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/31 (38%), Positives = 19/31 (61%)

Query: 50  KLERDKKLTKTYKDFDIPAEEVASLMEKLVN 80
           KLER K++ KT+KD D   +  +S+    V+
Sbjct: 439 KLERVKEVVKTWKDLDGALQSCSSVSSGTVD 469



>EAY09118.1 on XP_820184   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1050

 Score = 24.3 bits (51), Expect = 2.3,   Method: Composition-based stats.
 Identities = 11/24 (45%), Positives = 16/24 (66%)

Query: 50  KLERDKKLTKTYKDFDIPAEEVAS 73
           KLER K++ KT+KD D   +  +S
Sbjct: 452 KLERVKEVVKTWKDLDSALQSCSS 475



>EAY09118.1 on XP_812956   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1005

 Score = 24.3 bits (51), Expect = 2.3,   Method: Composition-based stats.
 Identities = 10/16 (62%), Positives = 13/16 (81%)

Query: 50  KLERDKKLTKTYKDFD 65
           KLER K++ KT+KD D
Sbjct: 414 KLERIKEVVKTWKDLD 429



>EAY09118.1 on XP_818963   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1055

 Score = 24.3 bits (51), Expect = 2.3,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 50  KLERDKKLTKTYKDFDIPAEEVASL 74
           KLER KK+ KT+ D D   +  +S+
Sbjct: 466 KLERIKKVVKTWADLDSALQSCSSV 490



>EAY09118.1 on XP_812615   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1116

 Score = 24.3 bits (51), Expect = 2.4,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 19/33 (57%)

Query: 50  KLERDKKLTKTYKDFDIPAEEVASLMEKLVNNP 82
           KLER K++ KT+KD D   +  +S     V+ P
Sbjct: 523 KLERIKEVVKTWKDLDGALQSCSSGSSVTVDFP 555



>EAY09118.1 on XP_812620   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1042

 Score = 24.3 bits (51), Expect = 2.8,   Method: Composition-based stats.
 Identities = 10/16 (62%), Positives = 13/16 (81%)

Query: 50  KLERDKKLTKTYKDFD 65
           KLER K++ KT+KD D
Sbjct: 454 KLERIKEVVKTWKDLD 469



>EAY09118.1 on XP_805883   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1038

 Score = 24.3 bits (51), Expect = 2.8,   Method: Composition-based stats.
 Identities = 10/16 (62%), Positives = 13/16 (81%)

Query: 50  KLERDKKLTKTYKDFD 65
           KLER K++ KT+KD D
Sbjct: 451 KLERVKEVVKTWKDLD 466



>EAY09118.1 on XP_818394   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1059

 Score = 23.9 bits (50), Expect = 2.9,   Method: Composition-based stats.
 Identities = 10/16 (62%), Positives = 13/16 (81%)

Query: 50  KLERDKKLTKTYKDFD 65
           KLER K++ KT+KD D
Sbjct: 454 KLERIKEVVKTWKDLD 469



>EAY09118.1 on XP_810068   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1147

 Score = 23.9 bits (50), Expect = 3.1,   Method: Composition-based stats.
 Identities = 12/31 (38%), Positives = 18/31 (58%)

Query: 50  KLERDKKLTKTYKDFDIPAEEVASLMEKLVN 80
           KLER K++ KT+KD D      +S+    V+
Sbjct: 556 KLERIKEVVKTWKDLDSALRTCSSVSSGTVD 586



>EAY09118.1 on XP_819381   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1046

 Score = 23.9 bits (50), Expect = 3.1,   Method: Composition-based stats.
 Identities = 10/16 (62%), Positives = 13/16 (81%)

Query: 50  KLERDKKLTKTYKDFD 65
           KLER K++ KT+KD D
Sbjct: 453 KLERIKEVVKTWKDLD 468



>EAY09118.1 on XP_812720   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1041

 Score = 23.9 bits (50), Expect = 3.1,   Method: Composition-based stats.
 Identities = 10/16 (62%), Positives = 13/16 (81%)

Query: 50  KLERDKKLTKTYKDFD 65
           KLER K++ KT+KD D
Sbjct: 451 KLERIKEVVKTWKDLD 466



>EAY09118.1 on XP_815749   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1053

 Score = 23.9 bits (50), Expect = 3.1,   Method: Composition-based stats.
 Identities = 10/16 (62%), Positives = 13/16 (81%)

Query: 50  KLERDKKLTKTYKDFD 65
           KLER K++ KT+KD D
Sbjct: 450 KLERIKEVVKTWKDLD 465



>EAY09118.1 on XP_808156   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1058

 Score = 23.9 bits (50), Expect = 3.1,   Method: Composition-based stats.
 Identities = 10/16 (62%), Positives = 13/16 (81%)

Query: 50  KLERDKKLTKTYKDFD 65
           KLER K++ KT+KD D
Sbjct: 460 KLERIKEVVKTWKDLD 475



>EAY09118.1 on XP_816853   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1044

 Score = 23.9 bits (50), Expect = 3.2,   Method: Composition-based stats.
 Identities = 10/16 (62%), Positives = 13/16 (81%)

Query: 50  KLERDKKLTKTYKDFD 65
           KLER K++ KT+KD D
Sbjct: 453 KLERIKEVVKTWKDLD 468



>EAY09118.1 on XP_802557   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 608

 Score = 23.9 bits (50), Expect = 3.7,   Method: Composition-based stats.
 Identities = 9/16 (56%), Positives = 12/16 (75%)

Query: 50  KLERDKKLTKTYKDFD 65
           +LER K + KT+KD D
Sbjct: 301 QLERIKSMVKTWKDLD 316



>EAY09118.1 on XP_806744   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 789

 Score = 23.9 bits (50), Expect = 3.7,   Method: Composition-based stats.
 Identities = 10/16 (62%), Positives = 13/16 (81%)

Query: 50  KLERDKKLTKTYKDFD 65
           KLER K++ KT+KD D
Sbjct: 195 KLERIKEVVKTWKDLD 210



>EAY09118.1 on XP_804223   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 746

 Score = 23.5 bits (49), Expect = 4.0,   Method: Composition-based stats.
 Identities = 10/16 (62%), Positives = 13/16 (81%)

Query: 50  KLERDKKLTKTYKDFD 65
           KLER K++ KT+KD D
Sbjct: 152 KLERIKEVVKTWKDLD 167



>EAY09118.1 on XP_808062   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 825

 Score = 23.5 bits (49), Expect = 4.6,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 15/24 (62%)

Query: 50  KLERDKKLTKTYKDFDIPAEEVAS 73
           KLER K++  T+KD D   +  +S
Sbjct: 449 KLERVKEVVNTWKDLDSALQSCSS 472



>EAY09118.1 on XP_805204   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 978

 Score = 23.1 bits (48), Expect = 5.9,   Method: Composition-based stats.
 Identities = 9/16 (56%), Positives = 12/16 (75%)

Query: 50  KLERDKKLTKTYKDFD 65
           +LER K + KT+KD D
Sbjct: 407 QLERIKSMVKTWKDLD 422



>EAY09118.1 on XP_804686   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1045

 Score = 23.1 bits (48), Expect = 6.0,   Method: Composition-based stats.
 Identities = 11/31 (35%), Positives = 19/31 (61%)

Query: 50  KLERDKKLTKTYKDFDIPAEEVASLMEKLVN 80
           KLER K++ KT++D D   +  +S+    V+
Sbjct: 453 KLERIKEVVKTWEDLDGALQSCSSVSSATVD 483



>EAY09118.1 on XP_817333   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1037

 Score = 22.7 bits (47), Expect = 8.3,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 17/28 (60%)

Query: 38  EEAKIIDPERPSKLERDKKLTKTYKDFD 65
           E+  ++      KLER +++ KT+KD D
Sbjct: 435 EKYNLVAVRLTEKLERIQEVVKTWKDLD 462



>EAY09118.1 on XP_814899   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 827

 Score = 22.7 bits (47), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 9/17 (52%), Positives = 14/17 (82%)

Query: 49  SKLERDKKLTKTYKDFD 65
           ++LER K++ KT+KD D
Sbjct: 452 AQLERVKEVLKTWKDVD 468



>EAY09118.1 on XP_807986   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1054

 Score = 22.7 bits (47), Expect = 9.0,   Method: Composition-based stats.
 Identities = 9/16 (56%), Positives = 13/16 (81%)

Query: 50  KLERDKKLTKTYKDFD 65
           +LER K++ KT+KD D
Sbjct: 459 QLERIKEVVKTWKDLD 474



>EAY09118.1 on XP_813616   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1038

 Score = 22.3 bits (46), Expect = 9.8,   Method: Composition-based stats.
 Identities = 9/16 (56%), Positives = 13/16 (81%)

Query: 50  KLERDKKLTKTYKDFD 65
           +LER K++ KT+KD D
Sbjct: 450 QLERVKEVVKTWKDLD 465



>EAY09118.1 on XP_804289   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1048

 Score = 22.3 bits (46), Expect = 9.9,   Method: Composition-based stats.
 Identities = 11/24 (45%), Positives = 14/24 (58%)

Query: 50  KLERDKKLTKTYKDFDIPAEEVAS 73
           KLER K++ K +KD D   E   S
Sbjct: 454 KLERIKEVVKKWKDLDSAFESCRS 477




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09119.1 trichohyalin, putative [Trichomonas vaginalis
G3]
         (427 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001610721  variant erythrocyte surface antigen-1, alpha subun...    28   1.0  
XP_001609041  variant erythrocyte surface antigen-1, alpha subun...    27   3.0  

>EAY09119.1 on XP_001610721  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1331

 Score = 28.5 bits (62), Expect = 1.0,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 7/111 (6%)

Query: 177 MREAEAAQRELDRQKEEKEAMVKQTYRDEFLKRNA----MLQKMKATRHEREKEEEREIA 232
           +++    Q EL + KE  E + K     + L +N      LQ++  +  E EK+      
Sbjct: 734 VKDGLNGQAELTKAKEALEKLTKGGGALDILVKNGNDAGSLQQISNSGQEWEKDYSSAKD 793

Query: 233 RQAESLSATREARAKREEEIRLEKTKRREIVVELQAKALAQQKKKIDDFQE 283
           R +E++S  R+A    + E+   K K   +   L   A A+ ++ ID  ++
Sbjct: 794 RISEAISKVRDALEALKNEL---KDKNSMLKGGLADWATAKFQQAIDQIKD 841



>EAY09119.1 on XP_001609041  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1318

 Score = 26.9 bits (58), Expect = 3.0,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 18/144 (12%)

Query: 154 EQIKDHKRQIKRAQQEEQMEVEKMREAEAAQRELDRQKEEKEAMVKQTYRDEFLKRNAML 213
           E+I +   Q+  AQ  E +E +     E  +REL++ KEE    VKQ  +D     N  L
Sbjct: 692 EKIGEVVVQLGNAQ--EALEGKDKGAIEGVKRELEKAKEELVEAVKQV-KDAV--ENCGL 746

Query: 214 QKMKATRHE------REKEEEREIARQAESLSATREARAKREEEIRLEKTKRREIVVELQ 267
           ++ K    E       +K    E       +SA  +   K  E ++ E  K+ + V+E  
Sbjct: 747 EEAKNKLEELTGNGGLDKANSGEYDPGKNKISAAIDGVCKALEALKKEMEKQLKEVLE-- 804

Query: 268 AKALAQQKKKIDDFQEKAISQATL 291
                +++  +DD  +  I + T 
Sbjct: 805 -----KEQSDMDDITKWFIREKTF 823




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09122.1 Adaptin N terminal region family protein
[Trichomonas vaginalis G3]
         (767 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09123.1 hypothetical protein TVAG_230830 [Trichomonas
vaginalis G3]
         (91 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_846273  VSG  (Establishment)  [Trypanosoma brucei]                  27   0.18 
XP_818689   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   3.5  
XP_001610496  variant erythrocyte surface antigen-1, beta subuni...    23   4.5  
XP_001608667  variant erythrocyte surface antigen-1, beta subuni...    22   9.6  

>EAY09123.1 on XP_846273  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 490

 Score = 26.6 bits (57), Expect = 0.18,   Method: Composition-based stats.
 Identities = 12/29 (41%), Positives = 17/29 (58%)

Query: 4  ADSSADAEPPCSGSTTANKSIIEKTGLIT 32
          A++SADA  PCS +    K +  + GL T
Sbjct: 18 AETSADANKPCSTACGCKKRLHARLGLYT 46



>EAY09123.1 on XP_818689   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 844

 Score = 23.1 bits (48), Expect = 3.5,   Method: Composition-based stats.
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 2/29 (6%)

Query: 55  PKAPFNPR-VFDW-TISNMNFPRLVMEND 81
           PK+PF  R   D  T+S++ FP LV  ND
Sbjct: 77  PKSPFAWRDTKDGDTVSSLRFPGLVETND 105



>EAY09123.1 on XP_001610496  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 1159

 Score = 22.7 bits (47), Expect = 4.5,   Method: Composition-based stats.
 Identities = 9/27 (33%), Positives = 16/27 (59%)

Query: 4   ADSSADAEPPCSGSTTANKSIIEKTGL 30
           +DS+  A   C+G T   K++I++  L
Sbjct: 106 SDSTGAASSTCAGGTEVIKALIDQLAL 132



>EAY09123.1 on XP_001608667  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 1139

 Score = 21.9 bits (45), Expect = 9.6,   Method: Composition-based stats.
 Identities = 9/27 (33%), Positives = 15/27 (55%)

Query: 4   ADSSADAEPPCSGSTTANKSIIEKTGL 30
            DS++ A   C+G T   K++I+   L
Sbjct: 107 GDSTSAARDTCAGGTEVIKALIDHLAL 133




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09124.1 GAF domain containing protein [Trichomonas
vaginalis G3]
         (1019 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_802251   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   4.2  
XP_001351515  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   9.5  

>EAY09124.1 on XP_802251   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 228

 Score = 27.3 bits (59), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 11/26 (42%), Positives = 19/26 (73%), Gaps = 2/26 (7%)

Query: 151 GEHQHWRPELDGKIVNEKGPLIIFQL 176
           G + H RP+++GK  NE+G L++ +L
Sbjct: 193 GNYSHTRPQVEGK--NERGLLLVKEL 216



>EAY09124.1 on XP_001351515  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2181

 Score = 26.6 bits (57), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 6/82 (7%)

Query: 587 KGIVELAGQDGHFKPAFSGKGAVDYCLKNN------KSLIINDTFHEAIVHDSSDRGKRN 640
           K I +L   D  +     G G +    K N      K    ND FH  + H  +D  +  
Sbjct: 562 KDIKKLVENDLEYNKEVKGSGGICILQKTNGEENGKKQKTFNDFFHFWVRHLLNDSIEWR 621

Query: 641 ILLVPIIADGSQIGCVEACNKH 662
             L   + +G++I C   CNK+
Sbjct: 622 EKLDKCLKNGTKILCKNGCNKN 643




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09126.1 AGC family protein kinase [Trichomonas
vaginalis G3]
         (402 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    62   2e-11
XP_818270   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.80 
XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 26   6.0  

>EAY09126.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 61.6 bits (148), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 55/101 (54%), Gaps = 2/101 (1%)

Query: 108 DIWRYLLQMLEGLKVLHNCGVVHRDIKSANILLS-APDLIKIADLGVSTVLHTTQLARTQ 166
           DI  Y+ Q+L+ +   H+ G++HRDIK  N+++     ++++ D G++   H  Q    +
Sbjct: 148 DIKYYIYQLLKAMNYCHSQGIMHRDIKPHNVMIDHEKKILRLIDWGLAEFYHPEQEYSVR 207

Query: 167 IGTPLYLAPEVW-KRRPYDSKCDMWSLGVLLYEMMTFTYPF 206
           + T  Y  PE+    R YD   D+WS+G +L  ++    PF
Sbjct: 208 VATRYYKGPELLVDMRYYDYSLDIWSIGCMLAGIIFKKEPF 248



>EAY09126.1 on XP_818270   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 380

 Score = 28.1 bits (61), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 7/78 (8%)

Query: 100 KRRPFHEDDIWRYLLQMLEGLKVLHNCGVVHRDIKSANILLSAPDLIKIADLGVSTVL-- 157
           K R +   D +  L ++ +G   L   G+  R +    I+L    L  + ++GV T L  
Sbjct: 231 KVRLYSSKDPYIALQRLTKGTNDL---GLNPRTVGIVLIVLGC--LFLMLEIGVCTALIC 285

Query: 158 HTTQLARTQIGTPLYLAP 175
           + T+  +  +GTPLYLAP
Sbjct: 286 YWTRPNKKSLGTPLYLAP 303



>EAY09126.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 25.8 bits (55), Expect = 6.0,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 9/77 (11%)

Query: 244  NPLMRPSVDDLLNTQCIKNRIGMLAAFVEHSEDLETD------DKLLSTIKVPMNVRNLH 297
            NPL     +DLLN Q    R   + + +E+  DLE D      D+ +  +KV  ++  LH
Sbjct: 1945 NPL---EDNDLLNLQLYFERKHEITSTLENDSDLELDHLGSNSDESIDNLKVYNDIIELH 2001

Query: 298  LPSAAYGKKVSIVKPLE 314
              S    K +  ++ L+
Sbjct: 2002 TYSTQILKYLDNIQKLK 2018




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09129.1 ARF GAP-like zinc finger-containing protein
[Trichomonas vaginalis G3]
         (399 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_802173   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.15 
XP_001611897  variant erythrocyte surface antigen-1, alpha subun...    25   9.5  

>EAY09129.1 on XP_802173   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 310

 Score = 30.4 bits (67), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 23/99 (23%), Positives = 45/99 (45%), Gaps = 5/99 (5%)

Query: 204 RANEILLSAHCPP--DDMPREDLIRQKYIELEFIEK---SFLNIYDAIERMDFYAVLKCV 258
           RA+ +L +A+     DDM     I +       +E    S +N    ++R+D   V+  V
Sbjct: 169 RAHTVLTAANGKKRLDDMLNPTTIAKGNKVFLLVESPGLSPVNDNSFLDRLDLTLVVGTV 228

Query: 259 MSGQLRDPANRIEYYSHLIISRRNFTPTKSQTEYNSISP 297
            +    +P+ RIE+ +  ++   N +    ++E  S+ P
Sbjct: 229 TNSTGGEPSKRIEWGAPKLLLSMNISAASDESELRSVFP 267



>EAY09129.1 on XP_001611897  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1369

 Score = 25.0 bits (53), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 9/40 (22%)

Query: 136 EDLKTEEKCADCGA------PCPTWCCLNWGTSICIHCSG 169
           +D+++E KC DCG       P   W  L  G   C  C G
Sbjct: 153 KDIESENKCGDCGCMKYVVIPSVDWVQLGRG---CTKCKG 189




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09144.1 hypothetical protein TVAG_363590 [Trichomonas
vaginalis G3]
         (117 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001611901  variant erythrocyte surface antigen-1, alpha subun...    23   4.4  
XP_001350796  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   5.1  
XP_829764  VSG  (Establishment)  [Trypanosoma brucei]                  22   9.1  

>EAY09144.1 on XP_001611901  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1211

 Score = 23.5 bits (49), Expect = 4.4,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 5/80 (6%)

Query: 1   MKNRKQIVFKIQSPIMSDHDFRQMLEGVMVHRENLIKYGTPYPPEAPDSEKMK-----QR 55
           +KN K ++ KI   ++   + ++ LEG  +   N +K       +A +S K        +
Sbjct: 677 VKNLKALLEKIGEVVVQLGNAQEALEGKKIDGINAVKKALEGVKKALESAKGALETELGK 736

Query: 56  KAELDATIAEYQAKIQELDD 75
           K  LD  + E +AK+  L +
Sbjct: 737 KGGLDGKLGEAKAKLDALTN 756



>EAY09144.1 on XP_001350796  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2646

 Score = 23.5 bits (49), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 9/22 (40%), Positives = 15/22 (68%)

Query: 20   DFRQMLEGVMVHRENLIKYGTP 41
            D+R +L+G  +   NL+K G+P
Sbjct: 1476 DYRDILDGKNMEVVNLLKDGSP 1497



>EAY09144.1 on XP_829764  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 434

 Score = 22.3 bits (46), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 3/42 (7%)

Query: 58 ELDATIAEYQAKIQELDDTKERYNQLLRTIYEEESRIKDEQK 99
          EL  TIA   +     D  +   N + RT+ E+E +I D QK
Sbjct: 28 ELTKTIA---SACDAADHLQWMINHIDRTVAEQERQIADGQK 66




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09147.1 hypothetical protein TVAG_363620 [Trichomonas
vaginalis G3]
         (113 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_820499   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   0.19 
XP_001351079  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   0.28 
XP_821088   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   0.37 
XP_001349512  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   0.57 
XP_001350415  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   0.79 
XP_816764   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   0.99 
XP_808081   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   1.2  
XP_001609040  variant erythrocyte surface antigen-1, alpha subun...    24   2.7  
XP_815188   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   2.8  
XP_819341   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   3.4  
XP_818480   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   3.5  
XP_812988   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   4.5  
XP_951521  VSG  (Establishment)  [Trypanosoma brucei]                  23   4.7  
XP_812309   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   4.7  
XP_812311   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   5.0  
XP_001611901  variant erythrocyte surface antigen-1, alpha subun...    23   6.1  
XP_821084   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   7.7  
XP_822014   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   7.9  
XP_822021   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   8.5  
XP_001348015  AMA-1  (Invasion)  [Plasmodium falciparum]               22   9.0  
XP_818399   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   9.5  

>EAY09147.1 on XP_820499   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 654

 Score = 27.3 bits (59), Expect = 0.19,   Method: Composition-based stats.
 Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)

Query: 47  KKVEEDFKN-ESDDLRKFLEDNKYITKSGP 75
           KK E+D KN E  +LR +L DN +I   GP
Sbjct: 391 KKAEKDNKNNEKGELRLWLTDNTHIVDIGP 420



>EAY09147.1 on XP_001351079  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2203

 Score = 26.9 bits (58), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 1/75 (1%)

Query: 26  KENDPLIKNEKSGIKKSNMADKKVEEDFKNESDDLRKFLEDNKYITKSGPPKLEISNSRI 85
           K+ND   +N K   K+     K VE+  K E  +++K  +    I   G P  E+S+  +
Sbjct: 644 KDNDNTCRNNKKCNKECGCFQKWVEQK-KKEWQNIKKHFDKQTDIVIEGGPLGELSHCGV 702

Query: 86  AEMREIAKSLKDKTT 100
            E     + LKD++T
Sbjct: 703 LEWNLKEEFLKDEST 717



>EAY09147.1 on XP_821088   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 910

 Score = 26.6 bits (57), Expect = 0.37,   Method: Composition-based stats.
 Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)

Query: 47  KKVEEDFKN-ESDDLRKFLEDNKYITKSGP 75
           KK E+D KN E  +LR +L DN +I   GP
Sbjct: 396 KKAEKDNKNNEKGELRLWLTDNTHIVDIGP 425



>EAY09147.1 on XP_001349512  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2980

 Score = 26.2 bits (56), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 9/73 (12%)

Query: 25   LKENDPLIKNEKSGIKKSNMADK--KVEEDFKNESDDLRKFLEDNKYITKSGPPKLEISN 82
              +ND LI    +G  K  MADK  K++E        ++KF ++      SG P  + S+
Sbjct: 1868 FGKNDILIGKTGTGSAKDEMADKESKIKE-------AIKKFFQNGDSQPLSGKPVTQSSD 1920

Query: 83   SRIAEMREIAKSL 95
             R A   + A+ +
Sbjct: 1921 KRTALWGDFAQDI 1933



>EAY09147.1 on XP_001350415  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3056

 Score = 25.8 bits (55), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 12/39 (30%), Positives = 23/39 (58%)

Query: 30  PLIKNEKSGIKKSNMADKKVEEDFKNESDDLRKFLEDNK 68
           P+I+N KS  +     + + + + KN+ +  +KF+ED K
Sbjct: 778 PVIENCKSCKESGGTCNGECKTECKNKCEVYKKFIEDCK 816



>EAY09147.1 on XP_816764   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 868

 Score = 25.4 bits (54), Expect = 0.99,   Method: Composition-based stats.
 Identities = 12/26 (46%), Positives = 15/26 (57%)

Query: 50  EEDFKNESDDLRKFLEDNKYITKSGP 75
           EED K E  +L  +L DN +I   GP
Sbjct: 383 EEDSKKEKGELHLWLTDNTHIVDIGP 408



>EAY09147.1 on XP_808081   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 893

 Score = 25.0 bits (53), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 9/53 (16%)

Query: 32  IKNEKSGIKKSNMADKKV---------EEDFKNESDDLRKFLEDNKYITKSGP 75
           +K  +SG   + + D+ V         E+D K E+ +L  +L DN +I   GP
Sbjct: 351 VKAARSGFITAKIDDRDVMLVTLPVYPEKDGKKENGELHLWLTDNTHIVDIGP 403



>EAY09147.1 on XP_001609040  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1335

 Score = 24.3 bits (51), Expect = 2.7,   Method: Composition-based stats.
 Identities = 8/25 (32%), Positives = 18/25 (72%)

Query: 13  QIKDAKEKYIHHLKENDPLIKNEKS 37
           +++  K + +  +KE+DP++KN K+
Sbjct: 635 RVEKVKGETLKMMKESDPIVKNLKA 659



>EAY09147.1 on XP_815188   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 862

 Score = 23.9 bits (50), Expect = 2.8,   Method: Composition-based stats.
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 50  EEDFKNESDDLRKFLEDNKYITKSGP 75
           +ED K E  +L  +L DN +I   GP
Sbjct: 383 KEDSKKEKGELHLWLTDNTHIVDIGP 408



>EAY09147.1 on XP_819341   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 888

 Score = 23.9 bits (50), Expect = 3.4,   Method: Composition-based stats.
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 50  EEDFKNESDDLRKFLEDNKYITKSGP 75
           E+D K E  +L  +L DN +I   GP
Sbjct: 405 EKDGKKEKGELHLWLTDNTHIVDIGP 430



>EAY09147.1 on XP_818480   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 926

 Score = 23.9 bits (50), Expect = 3.5,   Method: Composition-based stats.
 Identities = 11/26 (42%), Positives = 14/26 (53%)

Query: 50  EEDFKNESDDLRKFLEDNKYITKSGP 75
           E D K E  +L  +L DN +I   GP
Sbjct: 382 ETDSKKEKGELHLWLTDNTHIVDIGP 407



>EAY09147.1 on XP_812988   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 889

 Score = 23.5 bits (49), Expect = 4.5,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 4/59 (6%)

Query: 47  KKVEEDFKNESDDLRKFLEDNKYITKSGPPKLEISNSRIAEMREIAKSLKDKTTSINLI 105
           KK+    + E  +L  +L DN +I   GP    +S+  +A    + KS + +T    LI
Sbjct: 381 KKINGKGEKEKSELHLWLTDNTHIVDIGP----VSDDDVAASSLLYKSGESETKKEELI 435



>EAY09147.1 on XP_951521  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 444

 Score = 23.1 bits (48), Expect = 4.7,   Method: Composition-based stats.
 Identities = 10/20 (50%), Positives = 15/20 (75%)

Query: 78  LEISNSRIAEMREIAKSLKD 97
           L+ + +RI ++REI K LKD
Sbjct: 334 LQQAATRIDKLREIEKKLKD 353



>EAY09147.1 on XP_812309   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 827

 Score = 23.5 bits (49), Expect = 4.7,   Method: Composition-based stats.
 Identities = 10/21 (47%), Positives = 12/21 (57%)

Query: 55  NESDDLRKFLEDNKYITKSGP 75
           NE D L  +L DN +I   GP
Sbjct: 385 NEKDKLHLWLTDNTHIVDIGP 405



>EAY09147.1 on XP_812311   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 924

 Score = 23.1 bits (48), Expect = 5.0,   Method: Composition-based stats.
 Identities = 10/21 (47%), Positives = 12/21 (57%)

Query: 55  NESDDLRKFLEDNKYITKSGP 75
           NE D L  +L DN +I   GP
Sbjct: 391 NEKDKLHLWLTDNTHIVDIGP 411



>EAY09147.1 on XP_001611901  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1211

 Score = 23.1 bits (48), Expect = 6.1,   Method: Composition-based stats.
 Identities = 8/17 (47%), Positives = 15/17 (88%)

Query: 25  LKENDPLIKNEKSGIKK 41
           +KE+DP++KN K+ ++K
Sbjct: 670 VKESDPIVKNLKALLEK 686



>EAY09147.1 on XP_821084   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 965

 Score = 22.7 bits (47), Expect = 7.7,   Method: Composition-based stats.
 Identities = 10/22 (45%), Positives = 13/22 (59%)

Query: 54  KNESDDLRKFLEDNKYITKSGP 75
           KNE  +L  +L DN +I   GP
Sbjct: 407 KNEKGELHLWLTDNTHIVDIGP 428



>EAY09147.1 on XP_822014   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 950

 Score = 22.7 bits (47), Expect = 7.9,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 14/28 (50%)

Query: 48  KVEEDFKNESDDLRKFLEDNKYITKSGP 75
           K E    NE  +L  +L DN +I   GP
Sbjct: 449 KTEGVIANEKGELHLWLTDNTHIVDIGP 476



>EAY09147.1 on XP_822021   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 872

 Score = 22.7 bits (47), Expect = 8.5,   Method: Composition-based stats.
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 47  KKVEEDFKNESDDLRKFLEDNKYITKSGP 75
           K  EE+  NE   L  +L DN +I   GP
Sbjct: 377 KNTEEEQVNEKGVLHLWLTDNTHIVDIGP 405



>EAY09147.1 on XP_001348015  AMA-1  (Invasion)  [Plasmodium falciparum]
          Length = 622

 Score = 22.3 bits (46), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 7/13 (53%), Positives = 11/13 (84%)

Query: 58  DDLRKFLEDNKYI 70
           D++R F +DNKY+
Sbjct: 196 DEMRHFYKDNKYV 208



>EAY09147.1 on XP_818399   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 953

 Score = 22.3 bits (46), Expect = 9.5,   Method: Composition-based stats.
 Identities = 11/26 (42%), Positives = 14/26 (53%)

Query: 50  EEDFKNESDDLRKFLEDNKYITKSGP 75
           EE  K E  +L  +L DN +I   GP
Sbjct: 396 EEADKKEKGELHLWLTDNTHIVDIGP 421




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09149.1 hypothetical protein TVAG_363640 [Trichomonas
vaginalis G3]
         (71 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_829333  VSG  (Establishment)  [Trypanosoma brucei]                  24   0.96 
XP_001352170  MSP1  (Invasion)  [Plasmodium falciparum]                21   9.5  

>EAY09149.1 on XP_829333  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 420

 Score = 23.9 bits (50), Expect = 0.96,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 13/28 (46%)

Query: 4  LCAFINRGADNEIKIDLSAKPKRTSPSI 31
          LC FIN   D+E    +    KRT   I
Sbjct: 35 LCRFINLAGDSETPTKVEKNVKRTVKKI 62



>EAY09149.1 on XP_001352170  MSP1  (Invasion)  [Plasmodium falciparum]
          Length = 1720

 Score = 21.2 bits (43), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 9/30 (30%), Positives = 15/30 (50%)

Query: 37  MITLCNATIDLSLEFDEFKEFNEFPHDFHF 66
           M+TLC+         D ++E NE  +  +F
Sbjct: 169 MLTLCDNIHGFKYLIDGYEEINELLYKLNF 198




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09150.1 hypothetical protein TVAG_363650 [Trichomonas
vaginalis G3]
         (230 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001350410  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   3.4  
XP_001611737  variant erythrocyte surface antigen-1, beta subuni...    24   7.4  
XP_966307  PfEMP1  (Establishment)  [Plasmodium falciparum]            24   7.8  

>EAY09150.1 on XP_001350410  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2178

 Score = 25.4 bits (54), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 2/37 (5%)

Query: 37  KENILKKFRNKNNNQSDDNKSNSSNSNQQKHINYSTK 73
           K NI++K+RN  N+ SDDN S+  N N Q H + S K
Sbjct: 537 KSNIVEKYRNFCNS-SDDNNSDQIN-NWQCHYDESKK 571



>EAY09150.1 on XP_001611737  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 1139

 Score = 24.3 bits (51), Expect = 7.4,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 2/74 (2%)

Query: 15  EAAHQIYLDMVSDPDSNFSQKNKENILKKFR--NKNNNQSDDNKSNSSNSNQQKHINYST 72
           E+  + Y  + S   S    K+ E+I K++     +   S   ++ S+ +N+      +T
Sbjct: 326 ESVAEYYSSIYSTAQSAAKDKSTEDICKEYPLLVLHILASGYFRAGSAGANKVTPAKPAT 385

Query: 73  KEVKKERPPLIDPR 86
            + KKE P L  PR
Sbjct: 386 SDTKKETPSLRKPR 399



>EAY09150.1 on XP_966307  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2238

 Score = 24.3 bits (51), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 12/38 (31%), Positives = 20/38 (52%)

Query: 117 TDDYIRQRKREDEVAAQRIQKDKELAKKFTRQAIKKYR 154
            D ++ +  R D+V    +  D  LA KF  +++K YR
Sbjct: 129 CDQHLEKINRYDKVNNHTLLTDVCLAAKFEAESLKTYR 166




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09154.1 ankyrin repeat protein, putative [Trichomonas
vaginalis G3]
         (570 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_810676   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   2.4  
XP_001351515  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   3.2  
CAB37326  PfSUB2  (Proteases)  [Plasmodium falciparum]                 27   4.0  
XP_803417  VSG  (Establishment)  [Trypanosoma brucei]                  27   4.1  
XP_001609540  variant erythrocyte surface antigen-1, alpha subun...    27   5.0  
XP_804330   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   7.5  

>EAY09154.1 on XP_810676   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1040

 Score = 27.7 bits (60), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 11/88 (12%)

Query: 325 RKKMTEFLISHGANINEK-----DGDGETALHIAAW----NNRKEMTEFLISHGANINEK 375
           R +M + ++ HG +  EK          + +    W     NR    +FL   GA I  +
Sbjct: 197 RPRMADGVVPHGTDDEEKKEFKWQSRSTSGVPYDFWEDNSTNRDRFKQFLGGGGAGIRME 256

Query: 376 NKNGETVLDLAAW-NNSKEIVEVLISHG 402
           + +G  VL + A  NN K +  V+++ G
Sbjct: 257 D-DGRYVLPIQALKNNEKAVSLVILAKG 283



>EAY09154.1 on XP_001351515  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2181

 Score = 27.3 bits (59), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 117 CYYGAVDCFKFLRTKFDSKITQTCLEFSFLGG 148
           C    +DC K +R K+   I   C + SFL G
Sbjct: 341 CSGNGLDCTKTIRAKYIYAIGSECTKCSFLCG 372



>EAY09154.1 on CAB37326  PfSUB2  (Proteases)  [Plasmodium falciparum]
          Length = 1342

 Score = 26.9 bits (58), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 209 DQTNDIDECFLYSATFNFPSLLEYF-ISHGANINTKNKNGSTALHIAA 255
           +++ND D   LY ATF FP +     IS    I+  +  G  ++HI A
Sbjct: 893 NKSNDNDISPLYPATFTFPHVYSVASISRNFEISPFSNYGHKSVHILA 940



>EAY09154.1 on XP_803417  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 540

 Score = 26.6 bits (57), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 4/29 (13%)

Query: 410 KNGKTALDLAAARNYKEM----TEFLILH 434
           K GK A D+ AARN   +    TEF+ LH
Sbjct: 119 KGGKAAADITAARNAGRLQGAITEFIELH 147



>EAY09154.1 on XP_001609540  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1349

 Score = 26.6 bits (57), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 10/60 (16%)

Query: 493  IVEILISHGANIN---------EKDGDGETALHITAARNYKEMTEFLISHGANINEKNKN 543
            ++ +L  HG +           +KDG+ E    IT +R+ K   EFL S  A I +KNK 
Sbjct: 1201 VLPVLYRHGFSYGNPFNLEGYEQKDGETEGDYSITQSRDTKHCHEFLDSLSAVI-DKNKQ 1259



>EAY09154.1 on XP_804330   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 910

 Score = 25.8 bits (55), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 10/32 (31%), Positives = 20/32 (62%)

Query: 463 ILISHGANVNEKDGDGETALHIVARKNSEEIV 494
           +L+  GA  NE  G G  ++ ++AR ++++ V
Sbjct: 112 LLVIAGAQFNESSGSGSASMQLMARISNDDGV 143




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09158.1 hypothetical protein TVAG_363730 [Trichomonas
vaginalis G3]
         (288 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001611205  variant erythrocyte surface antigen-1, beta subuni...    26   2.6  
XP_001349035  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   2.9  

>EAY09158.1 on XP_001611205  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 1146

 Score = 26.2 bits (56), Expect = 2.6,   Method: Composition-based stats.
 Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 6/34 (17%)

Query: 140 YCENLYTVVEPRPHGGYYGPAID----NLHTVLR 169
           YC+   T V P P G YY P I     N+H + R
Sbjct: 204 YCKA--TTVPPPPEGQYYWPTISDDSTNVHLLAR 235



>EAY09158.1 on XP_001349035  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2239

 Score = 26.2 bits (56), Expect = 2.9,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 17/22 (77%)

Query: 83  LFGHFMNEVLTQTVLFPEEIQR 104
           LF H++NE+L  ++L+ +E+ R
Sbjct: 575 LFWHWINEMLKDSILWSKELDR 596




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09160.1 hypothetical protein TVAG_363750 [Trichomonas
vaginalis G3]
         (503 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001611897  variant erythrocyte surface antigen-1, alpha subun...    27   4.1  
XP_001347690  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   6.8  

>EAY09160.1 on XP_001611897  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1369

 Score = 26.6 bits (57), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 4/74 (5%)

Query: 6   ANINLCIIKNDESKKGVLKMQHNNGNVSLSFFKELESDNKGNTRQQKRFSQIP--DHVHQ 63
           + I  C    +E KKG    +H+  N    + K++ES+NK       ++  IP  D V  
Sbjct: 123 SKIEKCWEGKNECKKG--NKEHHGQNGECKYLKDIESENKCGDCGCMKYVVIPSVDWVQL 180

Query: 64  LSDFTKIEMDQDDQ 77
               TK +    D+
Sbjct: 181 GRGCTKCKGSGTDE 194



>EAY09160.1 on XP_001347690  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2215

 Score = 25.8 bits (55), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)

Query: 241  EIYSKIKRQWLLTSRKQWDNHTDLRSLVDALEKGIKAQVDLFKGYEHVK 289
            E + KIK  +L   +K  D   D+ SLV    + ++ Q D+ K  E  K
Sbjct: 1554 EEWGKIKEHYL--EKKHEDGDNDMTSLVTNFLRDVQPQTDVNKAIEPCK 1600




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09163.1 hypothetical protein TVAG_363780 [Trichomonas
vaginalis G3]
         (256 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_814625   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.16 
XP_818221   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   4.2  
XP_001351561  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   4.3  
XP_001348946  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   4.3  

>EAY09163.1 on XP_814625   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 941

 Score = 29.6 bits (65), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 53/95 (55%), Gaps = 4/95 (4%)

Query: 113 DGKLAVVQYLISAGANKEVKDNEGFTPLIKASYSGRLEVVQYLI-SAGANKEVKDNEGFT 171
           D  L +V+  +    NK++ D +  T L +A++   L+ ++ LI S G+  E+K ++   
Sbjct: 200 DSGLLLVKGKVGDETNKQI-DWKETTDLSRAAFGKELQSLEGLIGSGGSGFEMKGDKLVF 258

Query: 172 PL--IKALREGKLEVVQYLISVGANKEAKDNNGYT 204
           P+  +K+++EGK + V  LI   AN+  K + G +
Sbjct: 259 PVEGMKSVKEGKKKAVSLLIYFSANEGWKLSKGMS 293



>EAY09163.1 on XP_818221   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 748

 Score = 25.4 bits (54), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 3/89 (3%)

Query: 149 LEVVQYLISAGANKEVKDNEGFTPLIKALREGKLEVVQYLISVGANKEAKDNNGYTP-LI 207
           L VV    SAGA+  V  N G   L + +     +  Q L   G    ++ ++  +P L+
Sbjct: 51  LLVVMMCCSAGASNAVTSNSGNAQLPQGVDLFVPQTTQVLPKTGTTDSSRRDSFVSPSLV 110

Query: 208 RAS--YSGYLEVVKYLISVGANKEAKDND 234
            A    + + E   Y ++ G   E   +D
Sbjct: 111 SAGGVIAAFAEGRVYTVNAGRQNEKTSSD 139



>EAY09163.1 on XP_001351561  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3553

 Score = 25.4 bits (54), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 7/50 (14%)

Query: 31   EDFDQIYKFFEEISEKGNQKMMQKACDEEL-------WKKQNSDFLGRNV 73
            ED+++I K  +   E G      ++C +E        W+K NS++L +N 
Sbjct: 2856 EDYNRIQKKLKTCKENGKGSTCIRSCVDEWIKLKKDEWQKINSNYLDQNT 2905



>EAY09163.1 on XP_001348946  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3553

 Score = 25.4 bits (54), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 7/50 (14%)

Query: 31   EDFDQIYKFFEEISEKGNQKMMQKACDEEL-------WKKQNSDFLGRNV 73
            ED+++I K  +   E G      ++C +E        W+K NS++L +N 
Sbjct: 2856 EDYNRIQKKLKTCKENGKGSTCIRSCVDEWIKLKKDEWQKINSNYLDQNT 2905




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09168.1 IQ calmodulin-binding motif family protein
[Trichomonas vaginalis G3]
         (272 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609162  variant erythrocyte surface antigen-1, beta subuni...    27   1.2  

>EAY09168.1 on XP_001609162  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 1166

 Score = 27.3 bits (59), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 4/39 (10%)

Query: 6   LKGTARVITPKSQAVNG---LHKKPKTRASTTMTSKDKI 41
           + G  + I PK Q   G   LH +  T ASTT+  KDKI
Sbjct: 433 MDGKMKGILPKEQQDKGELKLHSE-STNASTTLLQKDKI 470




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09171.1 hypothetical protein TVAG_363860 [Trichomonas
vaginalis G3]
         (426 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351564  PfEMP1  (Establishment)  [Plasmodium falciparum]         30   0.42 
XP_001611897  variant erythrocyte surface antigen-1, alpha subun...    30   0.44 
XP_001609565  variant erythrocyte surface antigen-1, alpha subun...    28   0.92 
XP_001609450  variant erythrocyte surface antigen-1, alpha subun...    28   0.95 
XP_820300   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   1.0  
XP_001610714  variant erythrocyte surface antigen-1, alpha subun...    28   1.2  
XP_001608795  variant erythrocyte surface antigen-1, alpha subun...    28   1.2  
XP_001609667  variant erythrocyte surface antigen-1, alpha subun...    28   1.7  
XP_001611147  variant erythrocyte surface antigen-1, alpha subun...    27   2.4  
XP_001351318  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   5.0  

>EAY09171.1 on XP_001351564  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2207

 Score = 29.6 bits (65), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 8/105 (7%)

Query: 305  EAYRRALQKRKEKLEVKAQSRNKFMSNETLELLTDLNAQKSDNDKFP---VINIDG-LQE 360
            E +   L K KE+ E +  S N   S+    L TD++ Q   +D  P     N+D  L++
Sbjct: 2087 ENHHERLAKLKEEWENETHSGNTHPSDSNKTLNTDVSIQIDMDDGKPKKEFTNMDTILED 2146

Query: 361  FD----PLYKFNDEKITNVFTKESRFVHPSDLTYLNKIDVELEYN 401
             D    P Y   D+   +V   ++  V+P+++   +K+ +EL+ N
Sbjct: 2147 LDKYNEPYYDVQDDIYYDVNDHDTSTVNPNNMEKPSKVKIELDVN 2191



>EAY09171.1 on XP_001611897  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1369

 Score = 29.6 bits (65), Expect = 0.44,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 21/30 (70%)

Query: 246  NSDQNQQLEFNEETLTQMVSQSGRLTTDIR 275
            +++++QQ +  E  LT ++SQ G+L  DIR
Sbjct: 1251 STEKDQQKDTKEHPLTNLLSQVGQLQYDIR 1280



>EAY09171.1 on XP_001609565  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1341

 Score = 28.5 bits (62), Expect = 0.92,   Method: Composition-based stats.
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 8/45 (17%)

Query: 231  FLDVLNETSDVPIAGNSDQNQQLEFNEETLTQMVSQSGRLTTDIR 275
            FLD L +  ++   G  DQ+         LT ++SQ G+L  DIR
Sbjct: 1239 FLDSLQKVIEITEKGRQDQH--------PLTNLLSQVGKLQYDIR 1275



>EAY09171.1 on XP_001609450  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1309

 Score = 28.5 bits (62), Expect = 0.95,   Method: Composition-based stats.
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)

Query: 231  FLDVLNETSDVPIAGNSDQNQQLEFNEETLTQMVSQSGRLTTDIR 275
            FLD L+   D      + Q Q  E  +  LT ++SQ G+L  DIR
Sbjct: 1201 FLDSLSAVIDKNKQEGASQQQDQE--QHPLTNLLSQVGKLQYDIR 1243



>EAY09171.1 on XP_820300   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 660

 Score = 28.1 bits (61), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 8/80 (10%)

Query: 116 FTNYSLEIYQGKCKVTLDGKPTVAKISLSNTELQVSAHSKTI-ISHPRDKTLKAIIQF-- 172
           F NY+  +      V++DG+PT   + +    L      KT  +S+ ++K  + +     
Sbjct: 576 FANYNFTLV---ATVSIDGEPTSGSVPVMGVRLSREGEKKTFDLSYDKEKKWQVLCDVES 632

Query: 173 -EDCTKVDVIDDEVHHILMF 191
            ED ++  +  D  HH+++ 
Sbjct: 633 PEDQSRT-LATDTTHHVVIL 651



>EAY09171.1 on XP_001610714  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1231

 Score = 28.1 bits (61), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 5/67 (7%)

Query: 211  KEEIKQVTLNVTDV--PYIGNAFLDVLNETSDVPIAGNSDQNQQLEFNEETLTQMVSQSG 268
            K+  ++   ++TD   P   + FLD L    D      S Q+Q    N+  LT+++SQ G
Sbjct: 1102 KDGSREGDYSITDTKNPRRCHQFLDSLAVVIDKNKQAASQQDQD---NKHPLTELLSQVG 1158

Query: 269  RLTTDIR 275
            +L  DIR
Sbjct: 1159 QLQYDIR 1165



>EAY09171.1 on XP_001608795  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1323

 Score = 28.1 bits (61), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 5/51 (9%)

Query: 225  PYIGNAFLDVLNETSDVPIAGNSDQNQQLEFNEETLTQMVSQSGRLTTDIR 275
            P + + FLD L+      +     +++Q + ++  LT ++SQ G+L  DIR
Sbjct: 1204 PRLCHQFLDSLS-----AVINKKKESEQKDQDKHPLTNLLSQVGQLQYDIR 1249



>EAY09171.1 on XP_001609667  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1303

 Score = 27.7 bits (60), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 5/45 (11%)

Query: 231  FLDVLNETSDVPIAGNSDQNQQLEFNEETLTQMVSQSGRLTTDIR 275
            FLD LN   D    G + +  Q       LT+++ Q G+L  DIR
Sbjct: 1191 FLDSLNGVIDKNRQGTTQKQDQ-----HPLTELLKQVGKLQYDIR 1230



>EAY09171.1 on XP_001611147  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1304

 Score = 26.9 bits (58), Expect = 2.4,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 21/43 (48%)

Query: 233  DVLNETSDVPIAGNSDQNQQLEFNEETLTQMVSQSGRLTTDIR 275
            D L+    V      D +Q  +  E  L+ ++SQ G+L  DIR
Sbjct: 1194 DFLSSLQAVIDKNKQDPSQDQDTKEHPLSNLLSQVGKLQYDIR 1236



>EAY09171.1 on XP_001351318  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2169

 Score = 26.2 bits (56), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 8/100 (8%)

Query: 311  LQKRKEKLEVKAQSRNKFMSNETLELLTDLNAQKSDNDKFPV---INIDGLQE-----FD 362
            L K KE+ E +  S N   S+    L TD++ Q   ++  P+    N+D + E      +
Sbjct: 2055 LNKLKEEWENETHSGNTHTSDSNKTLNTDVSIQIDMDNPKPINQFTNMDTILEDLEKYNE 2114

Query: 363  PLYKFNDEKITNVFTKESRFVHPSDLTYLNKIDVELEYNT 402
            P Y   D+   +V   ++  V  +++   +K+ +E++ NT
Sbjct: 2115 PYYDVQDDIYYDVHDHDTSTVDSNNMDVPSKVQIEMDVNT 2154




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09173.1 small GTP-binding protein, putative
[Trichomonas vaginalis G3]
         (182 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_652776  Rab11B  (Establishment)  [Entamoeba histolytica]           103   8e-29
AAB86482  RabA  (Invasion)  [Entamoeba histolytica]                   100   1e-27
BAB40673  Rab5  (Establishment)  [Entamoeba histolytica]               92   1e-24
BAD34969  Rab7B  (Establishment)  [Entamoeba histolytica]              86   3e-22
XP_649196  Rab7A  (Establishment)  [Entamoeba histolytica]             85   1e-21
XP_803417  VSG  (Establishment)  [Trypanosoma brucei]                  24   4.8  

>EAY09173.1 on XP_652776  Rab11B  (Establishment)  [Entamoeba histolytica]
          Length = 211

 Score =  103 bits (256), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 57/161 (35%), Positives = 85/161 (52%), Gaps = 2/161 (1%)

Query: 16  KIVSLGETRVGKSCLIKRFCEGNRFVTQYIPTIGIDYGARQFTVDNTSFYVHFWDMSGDD 75
           KIV +GE+ VGKS L+ RF   N F      TIG+++  R     + +     WD +G +
Sbjct: 12  KIVLVGESGVGKSNLLLRFTR-NEFDPDKRSTIGVEFATRSINYCDKNIRAQIWDTAGQE 70

Query: 76  SYFEVRNEFYGDTDGFLLVFDMTARETFTQLPRWLEEAKKYGADLSCIVLCGNKCDGSKL 135
            Y  + N +Y    G L+V+D+T + +F  + +WL E  +        ++ GNKCD S+ 
Sbjct: 71  RYRAITNAYYRGALGALVVYDITKKTSFESVEKWLAELHENADKKVVQMVIGNKCDLSQT 130

Query: 136 -AVSTQEAADFAKKNGMPFFDTSAKSGKNISEAFTQLFRTV 175
             V T E  + AKKN   FF+TSA  G N+ EAF  L + +
Sbjct: 131 REVQTSEGEELAKKNNAFFFETSALDGSNVEEAFMTLLKKI 171



>EAY09173.1 on AAB86482  RabA  (Invasion)  [Entamoeba histolytica]
          Length = 219

 Score =  100 bits (249), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 89/164 (54%), Gaps = 11/164 (6%)

Query: 20  LGETRVGKSCLIKRFCEGNRFVTQYIPTIGIDYGARQFTVDNTSFYVHFWDMSGDDSYFE 79
           +G+  VGK+ LI+RFC G  +   Y  TIGI+   +   +D   + +  WD +G + Y  
Sbjct: 31  IGDVGVGKTALIQRFCFGT-YTEDYDATIGIETCDKSVNLDGKMYQLQLWDTAGQEKYHS 89

Query: 80  VRNEFYGDTDGFLLVFDMTARETFTQLPRWLEEAKKYGADLSC-----IVLCGNKCD--G 132
           +   ++ D  G LLVF +  +E+F     WL+    + + +S      ++L GNKCD  G
Sbjct: 90  LVRLYFKDIKGVLLVFQIDRQESFDHCKDWLD---LFYSSISSGFTPPVLLVGNKCDLIG 146

Query: 133 SKLAVSTQEAADFAKKNGMPFFDTSAKSGKNISEAFTQLFRTVL 176
           S   VS +    F  +NG+ + +TS+K   N+ EAF+QL R+++
Sbjct: 147 SSTRVSKESVDRFVSENGLEYIETSSKENTNVQEAFSQLLRSII 190



>EAY09173.1 on BAB40673  Rab5  (Establishment)  [Entamoeba histolytica]
          Length = 195

 Score = 92.0 bits (227), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 90/161 (55%), Gaps = 3/161 (1%)

Query: 16  KIVSLGETRVGKSCLIKRFCEGNRFVTQYIPTIGIDYGARQFTVDNTSFYVHFWDMSGDD 75
           KIV LG++ VGKS ++ R C+ + +      TIG  +  +   VD  +     WD +G +
Sbjct: 10  KIVLLGDSSVGKSSIVLRVCK-DEYKEFQENTIGAAFLTKTLIVDGETIKFEIWDTAGQE 68

Query: 76  SYFEVRNEFYGDTDGFLLVFDMTARETFTQLPRWLEEAKKYGADLSCIVLCGNKCDGSKL 135
            Y  +   +Y  ++  L+V+D+T+  +F Q  +W++E +  G + + I L GNKCD    
Sbjct: 69  RYHSLTPMYYRGSNAALVVYDITSDSSFIQAKKWIDELRGSGNE-AIIFLVGNKCDLDNS 127

Query: 136 AVSTQEAAD-FAKKNGMPFFDTSAKSGKNISEAFTQLFRTV 175
            V T+E A+ +A+   + + +TSAK+  N++E F Q+ R +
Sbjct: 128 RVITKEEAEGYARSLSIDYIETSAKANINVNELFDQIARKL 168



>EAY09173.1 on BAD34969  Rab7B  (Establishment)  [Entamoeba histolytica]
          Length = 207

 Score = 85.9 bits (211), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 85/172 (49%), Gaps = 7/172 (4%)

Query: 16  KIVSLGETRVGKSCLIKRFCEGNRFVTQYIPTIGIDYGARQFTVDNTSFYVHFWDMSGDD 75
           KI+ LG++ VGK+ L+ ++    +F +QY  TIG D+  +  T+++    +  WD +G +
Sbjct: 12  KIIILGDSGVGKTSLLNQYVT-KQFSSQYKATIGADFMTKDITINDQQISLQIWDTAGHE 70

Query: 76  SYFEVRNEFYGDTDGFLLVFDMTARETFTQLPRWLEEAKKYGADLS------CIVLCGNK 129
            +      FY   D  +LV D+T  E+F  L  W +E    G           ++   N 
Sbjct: 71  RFASFGTAFYRGADVCMLVCDVTVAESFEHLEVWRKEFISGGNPSDPESFPYVVIANKND 130

Query: 130 CDGSKLAVSTQEAADFAKKNGMPFFDTSAKSGKNISEAFTQLFRTVLAKIKR 181
           C+ +  AVS+ +   +   NG  FF+ SAK+G N+  AFT+    V  + K 
Sbjct: 131 CEPANRAVSSDQLRQWCVTNGYEFFECSAKTGWNVDSAFTKAATLVAMRQKE 182



>EAY09173.1 on XP_649196  Rab7A  (Establishment)  [Entamoeba histolytica]
          Length = 206

 Score = 84.7 bits (208), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 87/171 (50%), Gaps = 8/171 (4%)

Query: 15  VKIVSLGETRVGKSCLIKRFCEGNRFVTQYIPTIGIDYGARQFTVDNTSFYVHFWDMSGD 74
           +K++ LG++ VGK+ L+ +F   +++ + Y  TIG D+  +   VDN    +  WD +G+
Sbjct: 8   LKVIILGDSGVGKTSLMNQFV-NHKYSSVYKATIGADFLTKDLVVDNHEVTMQIWDTAGN 66

Query: 75  DSYFEVRNEFYGDTDGFLLVFDMTARETFTQLPRWLEE----AKKYGADLSCIVLCGNKC 130
           + +  +   FY   D   L +D+   +TF  L  W EE    A     D    V+ GNK 
Sbjct: 67  ERFQSLGVAFYRGADCCALCYDVNDPKTFESLNNWREEFLVQASPKNQDQFPFVVLGNKV 126

Query: 131 D---GSKLAVSTQEAADFAKKNGMPFFDTSAKSGKNISEAFTQLFRTVLAK 178
           D   GS  A+  +     ++   +PFF+TSAK+  N+  AF  + +  +A+
Sbjct: 127 DTYEGSPDAIKKKAEQWCSEHFNIPFFETSAKNATNVDAAFQSIAQAAIAQ 177



>EAY09173.1 on XP_803417  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 540

 Score = 24.3 bits (51), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 9/20 (45%), Positives = 14/20 (70%)

Query: 8   DGQPIPKVKIVSLGETRVGK 27
           DGQPIPK  + +  +T +G+
Sbjct: 357 DGQPIPKAALGTDADTTLGQ 376




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09177.1 hypothetical protein TVAG_363920 [Trichomonas
vaginalis G3]
         (162 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_652967  Vps35  (Establishment)  [Entamoeba histolytica]             26   1.6  
XP_808394   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   2.3  
XP_818963   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   8.8  

>EAY09177.1 on XP_652967  Vps35  (Establishment)  [Entamoeba histolytica]
          Length = 757

 Score = 25.8 bits (55), Expect = 1.6,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 23/46 (50%)

Query: 53  PLRGRTAPVEHGSRDIFKDHHTPIQITKKFSGDPILSVPIRKSKQQ 98
           PL G  A +      +FKD  T   I  K+   P++ V +R+ K++
Sbjct: 492 PLIGGDAEMFESILTLFKDKMTGDAIRIKYLAAPLIFVALRRRKEE 537



>EAY09177.1 on XP_808394   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 912

 Score = 25.0 bits (53), Expect = 2.3,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 18/43 (41%)

Query: 10  PHQRSQQKTRAPSQKPPQPKPDVEDIELVGYKPSEYRAFRQPT 52
           P +R Q+K  A S  P +P  D          PS   A  QPT
Sbjct: 693 PPERKQEKAVAVSPPPVEPANDTVTTSTQATVPSLTPAGTQPT 735



>EAY09177.1 on XP_818963   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1055

 Score = 23.5 bits (49), Expect = 8.8,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 22/56 (39%)

Query: 12  QRSQQKTRAPSQKPPQPKPDVEDIELVGYKPSEYRAFRQPTPLRGRTAPVEHGSRD 67
           + SQQ T   +++  Q   DV+  EL   K +E               PVE G  D
Sbjct: 816 ETSQQTTPHEAKESMQRDSDVQPRELPSTKSTEVADVEGSAESNDTQQPVEEGEAD 871




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09178.1 hypothetical protein TVAG_363930 [Trichomonas
vaginalis G3]
         (66 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_656181  Hgl2  (Adhesin)  [Entamoeba histolytica]                    27   0.074
XP_001352170  MSP1  (Invasion)  [Plasmodium falciparum]                23   1.4  
XP_001349437  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   1.7  
XP_810562   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   5.0  
XP_820141   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   5.0  

>EAY09178.1 on XP_656181  Hgl2  (Adhesin)  [Entamoeba histolytica]
          Length = 1286

 Score = 26.9 bits (58), Expect = 0.074,   Method: Composition-based stats.
 Identities = 11/20 (55%), Positives = 15/20 (75%)

Query: 13 NKEQYLYIVSEDNKLSMAQL 32
          NKE Y YI++ED+ L+  QL
Sbjct: 75 NKECYKYIINEDHNLNAQQL 94



>EAY09178.1 on XP_001352170  MSP1  (Invasion)  [Plasmodium falciparum]
          Length = 1720

 Score = 23.1 bits (48), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 12/34 (35%), Positives = 22/34 (64%)

Query: 13  NKEQYLYIVSEDNKLSMAQLLISHGAELNEKMLE 46
           NKE+ ++I +   K+ + +  I+H  E N+K+LE
Sbjct: 467 NKERKIFINNIKKKIDLEEKNINHTKEQNKKLLE 500



>EAY09178.1 on XP_001349437  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2231

 Score = 23.1 bits (48), Expect = 1.7,   Method: Composition-based stats.
 Identities = 9/26 (34%), Positives = 15/26 (57%)

Query: 11   DINKEQYLYIVSEDNKLSMAQLLISH 36
            D  K+   Y V++D+K SM  + + H
Sbjct: 2166 DFYKDDIYYDVNDDDKTSMDDIYVDH 2191



>EAY09178.1 on XP_810562   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 874

 Score = 21.9 bits (45), Expect = 5.0,   Method: Composition-based stats.
 Identities = 10/31 (32%), Positives = 16/31 (51%)

Query: 20  IVSEDNKLSMAQLLISHGAELNEKMLEQVTL 50
           +  ED+  + + LL + G   NEK  E + L
Sbjct: 404 VSGEDDDAAASSLLYNSGENTNEKKEELIAL 434



>EAY09178.1 on XP_820141   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 925

 Score = 21.9 bits (45), Expect = 5.0,   Method: Composition-based stats.
 Identities = 10/31 (32%), Positives = 16/31 (51%)

Query: 20  IVSEDNKLSMAQLLISHGAELNEKMLEQVTL 50
           +  ED+  + + LL + G   NEK  E + L
Sbjct: 404 VSGEDDDAAASSLLYNSGENTNEKKEELIAL 434




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09182.1 Sec7 domain containing protein [Trichomonas
vaginalis G3]
         (533 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_806427   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.45 
XP_001350082  Rh2b  (Adhesin)  [Plasmodium falciparum]                 27   3.8  

>EAY09182.1 on XP_806427   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 886

 Score = 29.6 bits (65), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 3/61 (4%)

Query: 343 GIENARQFAKLSSTG---AINQIASELSSTDDTKVNPPVQAPSNNVRITSFGAQPREDAP 399
           G+  + ++  ++S+G   ++NQ+ S  +S  D KVN  + +       T  G   + D P
Sbjct: 750 GVSTSTEYTAMTSSGEEGSVNQLLSGKTSDGDQKVNGEILSDGEQRSGTEVGDTVQGDGP 809

Query: 400 T 400
           T
Sbjct: 810 T 810



>EAY09182.1 on XP_001350082  Rh2b  (Adhesin)  [Plasmodium falciparum]
          Length = 1115

 Score = 26.9 bits (58), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 28/56 (50%)

Query: 464 LKAQNLERLQKRMEKRAKELEEYEETLRMWQRKRKELKLKMQNMTPEERAQYIAER 519
           LK Q  ERLQK  E + +E E  E   +   +K +EL+ K Q    +   Q + E+
Sbjct: 599 LKRQEQERLQKEEELKRQEQERLEREKQEQLQKEEELRKKEQEKQQQRNIQELEEQ 654




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09183.1 acetyltransferase, GNAT family protein
[Trichomonas vaginalis G3]
         (171 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_812243   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.22 
XP_821703   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   1.2  
XP_809179   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   7.0  
XP_001351561  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   7.3  
XP_001348946  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   7.3  
XP_808182   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   7.5  

>EAY09183.1 on XP_812243   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 802

 Score = 28.5 bits (62), Expect = 0.22,   Method: Composition-based stats.
 Identities = 14/36 (38%), Positives = 20/36 (55%)

Query: 93  GIATKLIVYTHRAFRQNFKTTHINLNVRETNRAGHK 128
           GIA+KL+  T    ++ F TT +   V E   AG+K
Sbjct: 128 GIASKLLTLTDEPSKEEFDTTKLKTQVLEECPAGNK 163



>EAY09183.1 on XP_821703   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 912

 Score = 26.2 bits (56), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/32 (37%), Positives = 17/32 (53%)

Query: 90  RKLGIATKLIVYTHRAFRQNFKTTHINLNVRE 121
           R  GIA+KL+  T  A ++ F  T +   V E
Sbjct: 181 RFTGIASKLLTLTDEASKEEFDATQVKTQVLE 212



>EAY09183.1 on XP_809179   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 853

 Score = 23.9 bits (50), Expect = 7.0,   Method: Composition-based stats.
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 93  GIATKLIVYTHRAFRQNFKTTHINLNVRE 121
           GIA+KL+  T    R+   TT +   V E
Sbjct: 125 GIASKLLALTGEQTRKELATTEVKTQVLE 153



>EAY09183.1 on XP_001351561  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3553

 Score = 23.9 bits (50), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 4/86 (4%)

Query: 68  KNFMKTKEYYG-GLTSVAVFNSYRKLGIATKLIVYTHRAFRQNFKTTHINLNVRETNRAG 126
           ++ +K+ EY G G+    +  S  +       I+     +R++ +T  +  N+R   +  
Sbjct: 165 ESIVKSHEYTGYGIYKSGICTSLARSFADIGDIIRGKDLYRRDSRTDKLEENLR---KIF 221

Query: 127 HKLYKDTLGYKFRFEEKGYYADGETG 152
             +YK+    K   E K YY D  TG
Sbjct: 222 ANIYKELKNGKKWAEAKEYYQDDGTG 247



>EAY09183.1 on XP_001348946  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3553

 Score = 23.9 bits (50), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 4/86 (4%)

Query: 68  KNFMKTKEYYG-GLTSVAVFNSYRKLGIATKLIVYTHRAFRQNFKTTHINLNVRETNRAG 126
           ++ +K+ EY G G+    +  S  +       I+     +R++ +T  +  N+R   +  
Sbjct: 165 ESIVKSHEYTGYGIYKSGICTSLARSFADIGDIIRGKDLYRRDSRTDKLEENLR---KIF 221

Query: 127 HKLYKDTLGYKFRFEEKGYYADGETG 152
             +YK+    K   E K YY D  TG
Sbjct: 222 ANIYKELKNGKKWAEAKEYYQDDGTG 247



>EAY09183.1 on XP_808182   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 918

 Score = 23.9 bits (50), Expect = 7.5,   Method: Composition-based stats.
 Identities = 13/35 (37%), Positives = 18/35 (51%)

Query: 125 AGHKLYKDTLGYKFRFEEKGYYADGETGFTLTYTF 159
           +G K+  DTL +     +KG   DG+T   L YT 
Sbjct: 244 SGVKMNDDTLVFPVEGTKKGESNDGKTVSLLIYTL 278




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09187.1 hypothetical protein TVAG_364020 [Trichomonas
vaginalis G3]
         (106 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09190.1 Sec1 family protein [Trichomonas vaginalis
G3]
         (555 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_844692  VSG  (Establishment)  [Trypanosoma brucei]                  29   0.61 
XP_001608785  variant erythrocyte surface antigen-1, alpha subun...    29   0.80 
XP_803984   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   1.6  
XP_811704   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   1.9  
XP_805247   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   1.9  

>EAY09190.1 on XP_844692  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 482

 Score = 29.3 bits (64), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 1/90 (1%)

Query: 309 QTHKIITDPNIDKTSQKYAEAMKRYIRDQSYATTVSNHLDICIRLDEALTKRCLADISKY 368
           Q  ++ TD   +K  +  A +  +   D   A T     D C  + E   K+C+ D  K 
Sbjct: 385 QILQLSTDLEGEKIKRNAATSKAKLSDDDCKAKTGGACKDGCKEISENGQKKCVVD-KKE 443

Query: 369 EQQLAAKEKDGSSYKPNLSDLQDIIIKQGP 398
             ++   EKD  +   N++     +I + P
Sbjct: 444 ATKVEGGEKDNKTGTTNITGSNSFVINKAP 473



>EAY09190.1 on XP_001608785  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 954

 Score = 28.9 bits (63), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 13/73 (17%)

Query: 370 QQLAAKEKDGSSYKPN-------LSDLQDII--IKQGPEPMDKLRA----LAVYQLSGGK 416
           + L   EKDG    P        + D++ ++  +K+G E +          A+  + G  
Sbjct: 753 EGLGKAEKDGKEVDPGKNAVSAAIHDIRKVVDALKKGVEALKSKEVEDAKFAIGDIVGSG 812

Query: 417 ISDTELERLLEAG 429
           ++DTELE +L+ G
Sbjct: 813 VADTELENILQQG 825



>EAY09190.1 on XP_803984   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 794

 Score = 28.1 bits (61), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 12/29 (41%), Positives = 16/29 (55%)

Query: 482 IDGKLDKKCFEIPTHTGRYTNVVLFFFGG 510
           +DG L      +PT   R+T V  F+FGG
Sbjct: 635 VDGVLVGSSAMLPTPEKRWTEVSYFYFGG 663



>EAY09190.1 on XP_811704   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 745

 Score = 27.7 bits (60), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 12/29 (41%), Positives = 16/29 (55%)

Query: 482 IDGKLDKKCFEIPTHTGRYTNVVLFFFGG 510
           +DG L      +PT   R+T V  F+FGG
Sbjct: 635 VDGVLVGSSAMLPTPEKRWTEVSYFYFGG 663



>EAY09190.1 on XP_805247   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 870

 Score = 27.7 bits (60), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 12/29 (41%), Positives = 16/29 (55%)

Query: 482 IDGKLDKKCFEIPTHTGRYTNVVLFFFGG 510
           +DG L      +PT   R+T V  F+FGG
Sbjct: 635 VDGVLVGSSAMLPTPEKRWTEVSYFYFGG 663




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09211.1 hypothetical protein TVAG_309000 [Trichomonas
vaginalis G3]
         (142 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001350415  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   8.4  

>EAY09211.1 on XP_001350415  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3056

 Score = 23.1 bits (48), Expect = 8.4,   Method: Composition-based stats.
 Identities = 11/32 (34%), Positives = 18/32 (56%)

Query: 1   MSNQELTKEQIQQLLDENTHLIKVILTCQNEG 32
           M    L K  + ++ D++  L  V+LT +NEG
Sbjct: 104 MCINNLEKLNVDKIRDKHAFLADVLLTARNEG 135




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09212.1 hypothetical protein TVAG_309010 [Trichomonas
vaginalis G3]
         (230 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001611147  variant erythrocyte surface antigen-1, alpha subun...    31   0.045
XP_001349031  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   1.6  

>EAY09212.1 on XP_001611147  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1304

 Score = 31.2 bits (69), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 22/41 (53%)

Query: 2    NFAQLIKDTIVPNQQDPEQDQDHIDEELENILSHPAPRYHD 42
            +F   ++  I  N+QDP QDQD  +  L N+LS      +D
Sbjct: 1194 DFLSSLQAVIDKNKQDPSQDQDTKEHPLSNLLSQVGKLQYD 1234



>EAY09212.1 on XP_001349031  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2275

 Score = 26.6 bits (57), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 15/65 (23%), Positives = 29/65 (44%), Gaps = 2/65 (3%)

Query: 149 GTLDSFVATADSSKQIPTMLSEVCRVLKPGGIFAEISYGTPNTRTPFLRASNLQWALQET 208
           GT  + + + ++   I T L   C+    GG+   +S G  N +     +   +W   E 
Sbjct: 543 GTTITILKSGENHDDIETKLKAFCKTQNGGGVV--LSGGRDNEKKSDKDSLYEEWKCYEG 600

Query: 209 KEIEK 213
           K+++K
Sbjct: 601 KDVKK 605




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09215.1 hypothetical protein TVAG_309040 [Trichomonas
vaginalis G3]
         (359 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001350413  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   0.74 

>EAY09215.1 on XP_001350413  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2860

 Score = 28.5 bits (62), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 200 VQELLDSLNKNVPVDGKWNEEKMNIHDFNSTVKIWSVAKVVVTPC 244
           + ELL+SLN+        N +K +  DFN + K +S +K    PC
Sbjct: 432 INELLNSLNEETKCKSTENTDKESKIDFNDSEKTFSASK-YCKPC 475




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09219.1 hypothetical protein TVAG_309080 [Trichomonas
vaginalis G3]
         (66 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09220.1 hypothetical protein TVAG_309090 [Trichomonas
vaginalis G3]
         (308 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001349207  EBA-175  (Adhesin)  [Plasmodium falciparum]              29   0.39 
XP_001350798  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   2.7  
ABA06449  MSA-2a/b T-2  (Invasion)  [Babesia bovis]                    25   4.5  
ABA06445  MSA-2a/b  (Invasion)  [Babesia bovis]                        25   4.5  

>EAY09220.1 on XP_001349207  EBA-175  (Adhesin)  [Plasmodium falciparum]
          Length = 1462

 Score = 28.9 bits (63), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 65/151 (43%), Gaps = 38/151 (25%)

Query: 85  LPIYASRVNTIYQTMLSRIALGKSNSYDLKPLEPFHIVESFSTSFQSQIESIARKYPKIS 144
           +PI A RV+ I   + SRI  G+                  +TS  +++ S  R+  K  
Sbjct: 124 VPINAVRVSRILSFLDSRINNGR------------------NTSSNNEVLSNCREKRK-G 164

Query: 145 TDISTEIPSIRQTFVSVIDRLPDSINRQDSLTVLSSSIVP------FQDSFISTLDKEMR 198
                +  + R  +V +    PD   R+  L +++ SI+        +D FI     E  
Sbjct: 165 MKWDCKKKNDRSNYVCI----PD---RRIQLCIVNLSIIKTYTKETMKDHFI-----EAS 212

Query: 199 QKLSQLLNGKSDDLSILKVFCDDLKTKMLSY 229
           +K SQLL  K+D+    K FC+DLK   L Y
Sbjct: 213 KKESQLLLKKNDNKYNSK-FCNDLKNSFLDY 242



>EAY09220.1 on XP_001350798  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2359

 Score = 26.2 bits (56), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 15/53 (28%), Positives = 25/53 (47%)

Query: 101  SRIALGKSNSYDLKPLEPFHIVESFSTSFQSQIESIARKYPKISTDISTEIPS 153
            S   L ++ S  +K   P  +VE      Q +IE   +K+P+ S +  T  P+
Sbjct: 1757 SFCGLNRTESSKIKDGTPKDVVECLFQKIQKKIEECKQKHPQPSANNCTTSPT 1809



>EAY09220.1 on ABA06449  MSA-2a/b T-2  (Invasion)  [Babesia bovis]
          Length = 274

 Score = 25.4 bits (54), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 8/33 (24%)

Query: 274 LVEICNKFYQDESA--------KEVEKILNSLP 298
           LV+ CN F  DES         KE ++++NS P
Sbjct: 169 LVKFCNDFLDDESPFMKMYKALKEYDELVNSAP 201



>EAY09220.1 on ABA06445  MSA-2a/b  (Invasion)  [Babesia bovis]
          Length = 274

 Score = 25.4 bits (54), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 8/33 (24%)

Query: 274 LVEICNKFYQDESA--------KEVEKILNSLP 298
           LV+ CN F  DES         KE ++++NS P
Sbjct: 169 LVKFCNDFLDDESPFMKMYKALKEYDELVNSAP 201




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09227.1 hypothetical protein TVAG_309160 [Trichomonas
vaginalis G3]
         (3198 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAG32024  MIC10  (Others)  [Toxoplasma gondii]                         37   0.006
XP_820184   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           32   0.67 
XP_843648  VSG  (Establishment)  [Trypanosoma brucei]                  30   2.7  
XP_802488   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   7.3  
XP_812956   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   9.0  

>EAY09227.1 on AAG32024  MIC10  (Others)  [Toxoplasma gondii]
          Length = 198

 Score = 37.4 bits (85), Expect = 0.006,   Method: Composition-based stats.
 Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 15/126 (11%)

Query: 1543 ERHSQQEVVEAKKKEEEAAREKEMLFQITEEDYAALSPEEQEEVDKKRGELRKRMLRGIL 1602
            +  S +EV EAK+K  E  R K       EED  A +  +QE V ++  E+ K+  RG+ 
Sbjct: 78   QNQSPEEVEEAKRKYHEELRRK------AEED--AETKRKQEAVIQELKEVAKK--RGLR 127

Query: 1603 ATIKEQDTETDKKSRSKHKHRSSKAVDKSEKSDEKESSRSKSSKHHR--SRKDKDK--EE 1658
               + ++   D++ ++ ++ R  +  D     +E+   + K  +  R  +RK+ DK  EE
Sbjct: 128  EAAEREEKRIDEQ-QANYEQRQQELRDMDSAMEERLMQQRKKDQEERELARKNSDKVMEE 186

Query: 1659 KEEKPA 1664
             +EK A
Sbjct: 187  LKEKLA 192



>EAY09227.1 on XP_820184   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1050

 Score = 32.0 bits (71), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 8/60 (13%)

Query: 2862 AMQQPQEEEVKETKPGKNGKRQTSSRGSVRGSHADVKAATQAKDSPLQQQQAKDPKNDGD 2921
              QQP EEE      G NG+   S+  S  G+ +D+  AT+  DS  Q QQ+ +P  + D
Sbjct: 853  GTQQPVEEE------GTNGRGGGST--SSVGASSDMDTATETVDSEHQVQQSTEPSAEND 904



>EAY09227.1 on XP_843648  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 524

 Score = 30.0 bits (66), Expect = 2.7,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 17/80 (21%)

Query: 1630 KSEKSDEKESSRSKSSKHHRSRKDKDKEEKEEKPATPPEKDAPVAAKP------------ 1677
            K ++  E++S  + SS  H S+   +  E ++K     EKD    +KP            
Sbjct: 377  KEQQVKEQQSQVAASSPSHPSKPATEAVEVQKKECEAIEKDTDCDSKPYCTYQKDSADDK 436

Query: 1678 -----EQKPRKKGVPSDPTE 1692
                   K  K GVP  PT+
Sbjct: 437  KCKFNATKAEKSGVPVTPTQ 456



>EAY09227.1 on XP_802488   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 485

 Score = 28.5 bits (62), Expect = 7.3,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 10/110 (9%)

Query: 1586 VDKKRGELRKRMLRGILATIKEQDTETDKKSRSKHKHRSSKAV--------DKSEKSDEK 1637
            V   R + R+R+        + +++E  + + S+H   S+  +        + +   D K
Sbjct: 8    VKAPRTDNRRRVTGSSGMRREGRESEPQRPNMSRHHFYSAVLLLLMLCGSGEAAADGDSK 67

Query: 1638 ESSRSKSSKHHRSRKDKDKEEKEEKPATPP--EKDAPVAAKPEQKPRKKG 1685
             +  + S KH+  R  KD+EEK      P   E D  V A  E    K+G
Sbjct: 68   SNQGASSGKHYVWRDVKDEEEKLSLLRVPSLVEMDGEVFAVAEAHCTKEG 117



>EAY09227.1 on XP_812956   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1005

 Score = 28.5 bits (62), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)

Query: 2882 RQTSSRGSVRGSHADVKAATQAKDSPLQQQQAKDPKNDGD 2921
            R   S  SV G+ +D+  AT+  DS  Q QQ+ +P  +GD
Sbjct: 823  RSGGSTSSV-GATSDMDTATETVDSEHQVQQSTEPATEGD 861




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09249.1 UTP--glucose-1-phosphate uridylyltransferase
family protein [Trichomonas vaginalis G3]
         (581 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_845142  VSG  (Establishment)  [Trypanosoma brucei]                  28   1.8  
AAK31246  variable surface protein IVd  (Establishment)  [Giardi...    25   8.5  
AAK31234  variable surface protein 21a  (Establishment)  [Giardi...    25   8.5  

>EAY09249.1 on XP_845142  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 481

 Score = 27.7 bits (60), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 8/48 (16%)

Query: 1   MKVEAVKAALTKVLEGQVEFTVVGAKAESKVSEQPMTAEETRCGACNR 48
           +K EAV AALTK L G+           SK +  P T   + CG  N+
Sbjct: 153 IKAEAVTAALTKALYGET--------GNSKNARLPDTNRASGCGNSNK 192



>EAY09249.1 on AAK31246  variable surface protein IVd  (Establishment)  [Giardia
          duodenalis]
          Length = 165

 Score = 25.0 bits (53), Expect = 8.5,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 14/36 (38%)

Query: 11 TKVLEGQVEFTVVGAKAESKVSEQPMTAEETRCGAC 46
          TKVL G    T  G+  E K      T     C AC
Sbjct: 23 TKVLPGMAVCTQAGSNGECKTCANGQTYANNNCPAC 58



>EAY09249.1 on AAK31234  variable surface protein 21a  (Establishment)  [Giardia
          duodenalis]
          Length = 165

 Score = 25.0 bits (53), Expect = 8.5,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 14/36 (38%)

Query: 11 TKVLEGQVEFTVVGAKAESKVSEQPMTAEETRCGAC 46
          TKVL G    T  G+  E K      T     C AC
Sbjct: 23 TKVLPGMAVCTQAGSNGECKTCANGQTYANNNCPAC 58




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09252.1 CK1 family protein kinase [Trichomonas
vaginalis G3]
         (350 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    36   0.002
XP_813123   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   8.2  

>EAY09252.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 36.2 bits (82), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 14/45 (31%), Positives = 28/45 (62%), Gaps = 1/45 (2%)

Query: 113 SILCGLESMHKKGFIHRDVKPSNILLRRSREYPIAIIDFGLSRVY 157
            +L  +   H +G +HRD+KP N+++   ++  + +ID+GL+  Y
Sbjct: 155 QLLKAMNYCHSQGIMHRDIKPHNVMIDHEKKI-LRLIDWGLAEFY 198



>EAY09252.1 on XP_813123   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1048

 Score = 25.0 bits (53), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 17/128 (13%)

Query: 180 YASPNAHMHQDLSRRDDLI---------SWFYLVIDVMAGPLPWKKLENRAEILHMKRRI 230
           Y   NA +H    +R ++          +W    +  M   +P+    N   ++     +
Sbjct: 517 YLGVNATVHGPAEKRREVPNGLTFKGPGAWAVWPVGDMGQTVPYYFANNEFTLVAT---V 573

Query: 231 SISNLSDQIAHQLTLIWDHIQSLGFTDAPNYAYMHDLLREACEQNNVHQSDEWDWHPQ-- 288
           SI  +  + +  + LI   +     T     +Y HD    A  +N+ +  D ++W P   
Sbjct: 574 SIHEVPKESSSPIPLIGVRMNDTKGTVLFGLSYTHDKKWLAISENSGNVEDLFEWEPNET 633

Query: 289 ---ILQMD 293
              +LQMD
Sbjct: 634 YQVVLQMD 641




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09254.1 eukaryotic release factor 3 GTPase subunit
[Trichomonas vaginalis G3]
         (555 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]                 62   6e-11
XP_813237   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           41   1e-04
XP_813586   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           41   2e-04
XP_820186   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           37   0.003
XP_820135   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           35   0.009
XP_648254  SREHP  (Adhesin)  [Entamoeba histolytica]                   34   0.013
AAC37226  SBP1  (Others)  [Babesia bovis]                              33   0.050
XP_001349740  PfEMP1  (Establishment)  [Plasmodium falciparum]         32   0.11 
XP_808957   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           31   0.27 
XP_810140   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.7  
XP_805038   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   3.8  
XP_001347691  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   4.9  
ABA06451  MSA-2a2  (Invasion)  [Babesia bovis]                         26   5.6  
AAL15423  MSA-2b  (Invasion)  [Babesia bovis]                          26   5.6  
XP_815706   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   7.1  
XP_815707   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   7.1  
XP_001349032  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   8.2  
XP_811521   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   9.1  

>EAY09254.1 on XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]
          Length = 2112

 Score = 62.0 bits (149), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 24/54 (44%), Positives = 30/54 (55%)

Query: 48  KPQEEPKPAPKPEPKPEPKPEPKPAPKPEPKPEPKPEPKPEPKPEPKAEPKPEP 101
           KP+E P+P  KP P+  P P  KP P+  P P  KP P+  P P  K EP+  P
Sbjct: 501 KPEENPEPVEKPNPEENPNPVEKPTPEENPNPVEKPTPEENPNPVEKPEPEKNP 554




 Score = 48.5 bits (114), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 1/55 (1%)

Query: 30  PKVETKPVVLTTSKPAEN-KPQEEPKPAPKPEPKPEPKPEPKPAPKPEPKPEPKP 83
           PK E  P  +    P EN  P E+P P   P P  +P PE  P P  +P+PE  P
Sbjct: 500 PKPEENPEPVEKPNPEENPNPVEKPTPEENPNPVEKPTPEENPNPVEKPEPEKNP 554



>EAY09254.1 on XP_813237   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1496

 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/91 (68%), Positives = 63/91 (69%), Gaps = 16/91 (17%)

Query: 43  KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
           KPAE KP E    EPKPA PKP EPKP EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 806 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 865

Query: 90  KP-EPK-AEPKP-EPKKEEAEEEEDIEEEEK 117
           KP EPK AEPKP EPK  E +  E    E K
Sbjct: 866 KPAEPKPAEPKPAEPKPAEPKSAEPKPAEPK 896




 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/79 (74%), Positives = 59/79 (74%), Gaps = 16/79 (20%)

Query: 43  KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
           KPAE KP E    EPKPA PKP EPKP EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 771 KPAEPKPAEPKSAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 830

Query: 90  KP-EPK-AEPKP-EPKKEE 105
           KP EPK AEPKP EPK  E
Sbjct: 831 KPAEPKPAEPKPAEPKPAE 849




 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/79 (74%), Positives = 59/79 (74%), Gaps = 16/79 (20%)

Query: 43  KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
           KPAE KP E    EPKPA PKP EPKP EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 921 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 980

Query: 90  KP-EPK-AEPKP-EPKKEE 105
           KP EPK AEPKP EPK  E
Sbjct: 981 KPAEPKPAEPKPAEPKPAE 999




 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/79 (74%), Positives = 59/79 (74%), Gaps = 16/79 (20%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
            KPAE KP E    EPKPA PKP EPKP EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 956  KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 1015

Query: 90   KP-EPK-AEPKP-EPKKEE 105
            KP EPK AEPKP EPK  E
Sbjct: 1016 KPAEPKPAEPKPAEPKPAE 1034




 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/76 (76%), Positives = 58/76 (76%), Gaps = 16/76 (21%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
            KPAE KP E    EPKPA PKP EPKP EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 991  KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 1050

Query: 90   KP-EPK-AEPKP-EPK 102
            KP EPK AEPKP EPK
Sbjct: 1051 KPAEPKPAEPKPAEPK 1066




 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 64/100 (64%), Positives = 67/100 (67%), Gaps = 17/100 (17%)

Query: 22  NGTKIEIKP--KVETKPVVLTTS--KPAENKPQEEPKPA-PKP-EPK-PEPKP-EPKPA- 72
           N  K+ I P    E KP    ++  KPAE KP E PKPA PKP EPK  EPKP EPKPA 
Sbjct: 686 NANKVTIPPPKSAEPKPAEPKSAEPKPAEPKPAE-PKPAEPKPAEPKPAEPKPAEPKPAE 744

Query: 73  PKP-EPKP-EPKP-EPKP-EPKP-EPK-AEPKP-EPKKEE 105
           PKP EPKP EPKP EPKP EPKP EPK AEPKP EPK  E
Sbjct: 745 PKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAE 784




 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 59/84 (70%), Positives = 59/84 (70%), Gaps = 21/84 (25%)

Query: 43  KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PKP-EPKP------EPKP-EP 85
           KPAE KP E    EPKPA PKP EPKP EPKP EPKPA PKP EPKP      EPKP EP
Sbjct: 836 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEP 895

Query: 86  KP-EPKP-EPK-AEPKP-EPKKEE 105
           KP EPKP EPK AEPKP EPK  E
Sbjct: 896 KPAEPKPAEPKPAEPKPAEPKSAE 919




 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 59/84 (70%), Positives = 59/84 (70%), Gaps = 21/84 (25%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PKP-EPKP------EPKP-EP 85
            KPAE KP E    EPKPA PKP EPKP EPKP EPKPA PKP EPKP      EPKP EP
Sbjct: 1146 KPAEPKPAEPKSAEPKPAEPKPAEPKPVEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEP 1205

Query: 86   KP-EPKP-EPK-AEPKP-EPKKEE 105
            KP EPKP EPK AEPKP EPK  E
Sbjct: 1206 KPAEPKPAEPKPAEPKPAEPKSAE 1229




 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 59/84 (70%), Positives = 59/84 (70%), Gaps = 21/84 (25%)

Query: 43  KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PKP-EPKP------EPKP-EP 85
           KPAE KP E    EPKPA PKP EPKP EPKP EPKPA PKP EPKP      EPKP EP
Sbjct: 731 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEP 790

Query: 86  KP-EPKP-EPK-AEPKP-EPKKEE 105
           KP EPKP EPK AEPKP EPK  E
Sbjct: 791 KPAEPKPAEPKPAEPKPAEPKPAE 814




 Score = 38.1 bits (87), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/106 (62%), Positives = 66/106 (62%), Gaps = 30/106 (28%)

Query: 26   IEIKPKVETKPVVLTTSKPAENKPQE----EPKPA------PKP-EPKP-EPKP-EPKPA 72
             E KP  E KPV     KPAE KP E    EPKPA      PKP EPKP EPKP EPKPA
Sbjct: 1163 AEPKP-AEPKPV---EPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPAEPKPA 1218

Query: 73   -PKP------EPKP-EPKP-EPKP-EPKP-EPK-AEPKP-EPKKEE 105
             PKP      EPKP EPKP EPKP EPKP EPK AEPKP EPK  E
Sbjct: 1219 EPKPAEPKSAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAE 1264




 Score = 38.1 bits (87), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 65/96 (67%), Positives = 65/96 (67%), Gaps = 20/96 (20%)

Query: 26   IEIKPKVETKPVVLTTSKPAENKPQE----EPKPA-PKP-EPK-PEPKP-EPKPA-PKP- 75
             E KP VE KP      KPAE KP E    EPKPA PKP EPK  EPKP EPKPA PKP 
Sbjct: 1118 AEPKP-VEPKPA---EPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPV 1173

Query: 76   EPKP-EPKP-EPKP-EPKP-EPK-AEPKP-EPKKEE 105
            EPKP EPKP EPKP EPKP EPK AEPKP EPK  E
Sbjct: 1174 EPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAE 1209




 Score = 37.7 bits (86), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/71 (73%), Positives = 52/71 (73%), Gaps = 15/71 (21%)

Query: 43   KPAENKPQEEPKPAPKPEPKP-EPKP-EPKPAPKPEPKP-EPKP-EPKP-EPKP-EPK-A 95
            KPAE KP  EPKPA   EPKP EPKP EPKPA   EPKP EPKP EPKP EPKP EPK A
Sbjct: 1106 KPAEPKPA-EPKPA---EPKPVEPKPAEPKPA---EPKPAEPKPAEPKPAEPKPAEPKSA 1158

Query: 96   EPKP-EPKKEE 105
            EPKP EPK  E
Sbjct: 1159 EPKPAEPKPAE 1169




 Score = 37.7 bits (86), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 61/91 (67%), Positives = 62/91 (68%), Gaps = 16/91 (17%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPK-PEPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
            KPAE KP E    EPKPA PKP EPK  EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 996  KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 1055

Query: 90   KP-EPK-AEPKP-EPKKEEAEEEEDIEEEEK 117
            KP EPK AEPKP EPK  E +  E    E K
Sbjct: 1056 KPAEPKPAEPKPVEPKAAEPKPAEPKSAEPK 1086




 Score = 37.7 bits (86), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 61/91 (67%), Positives = 62/91 (68%), Gaps = 16/91 (17%)

Query: 43  KPAENKPQE----EPKPA-PKP-EPK-PEPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
           KPAE KP E    EPKPA PKP EPK  EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 801 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 860

Query: 90  KP-EPK-AEPKP-EPKKEEAEEEEDIEEEEK 117
           KP EPK AEPKP EPK  E +  E    E K
Sbjct: 861 KPAEPKPAEPKPAEPKPAEPKPAEPKSAEPK 891




 Score = 37.4 bits (85), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/79 (73%), Positives = 58/79 (73%), Gaps = 16/79 (20%)

Query: 43  KPAENKPQE----EPKPA-PKP-EPKP-EPK-PEPKPA-PKP-EPKP-EPKP-EPKP-EP 89
           KPAE KP E    EPKPA PKP EPKP EPK  EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 751 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPAEPKPAEPKPAEP 810

Query: 90  KP-EPK-AEPKP-EPKKEE 105
           KP EPK AEPKP EPK  E
Sbjct: 811 KPAEPKPAEPKPAEPKPAE 829




 Score = 37.4 bits (85), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/79 (73%), Positives = 58/79 (73%), Gaps = 16/79 (20%)

Query: 43  KPAENKPQE----EPKPA-PKP-EPK-PEPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
           KPAE KP E    EPKPA PKP EPK  EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 756 KPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 815

Query: 90  KP-EPK-AEPKP-EPKKEE 105
           KP EPK AEPKP EPK  E
Sbjct: 816 KPAEPKPAEPKPAEPKPAE 834




 Score = 37.4 bits (85), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/79 (73%), Positives = 58/79 (73%), Gaps = 16/79 (20%)

Query: 43  KPAENKPQE----EPKPA-PKP-EPK-PEPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
           KPAE KP E    EPKPA PKP EPK  EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 786 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 845

Query: 90  KP-EPK-AEPKP-EPKKEE 105
           KP EPK AEPKP EPK  E
Sbjct: 846 KPAEPKPAEPKPAEPKPAE 864




 Score = 37.4 bits (85), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/79 (73%), Positives = 58/79 (73%), Gaps = 16/79 (20%)

Query: 43  KPAENKPQE----EPKPA-PKP-EPK-PEPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
           KPAE KP E    EPKPA PKP EPK  EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 791 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 850

Query: 90  KP-EPK-AEPKP-EPKKEE 105
           KP EPK AEPKP EPK  E
Sbjct: 851 KPAEPKPAEPKPAEPKPAE 869




 Score = 37.4 bits (85), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/79 (73%), Positives = 58/79 (73%), Gaps = 16/79 (20%)

Query: 43  KPAENKPQE----EPKPA-PKP-EPK-PEPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
           KPAE KP E    EPKPA PKP EPK  EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 796 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 855

Query: 90  KP-EPK-AEPKP-EPKKEE 105
           KP EPK AEPKP EPK  E
Sbjct: 856 KPAEPKPAEPKPAEPKPAE 874




 Score = 37.4 bits (85), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/79 (73%), Positives = 58/79 (73%), Gaps = 16/79 (20%)

Query: 43  KPAENKPQE----EPKPA-PKP-EPK-PEPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
           KPAE KP E    EPKPA PKP EPK  EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 821 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 880

Query: 90  KP-EPK-AEPKP-EPKKEE 105
           KP EPK AEPKP EPK  E
Sbjct: 881 KPAEPKSAEPKPAEPKPAE 899




 Score = 37.4 bits (85), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/79 (73%), Positives = 58/79 (73%), Gaps = 16/79 (20%)

Query: 43  KPAENKPQE----EPKPA-PKP-EPK-PEPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
           KPAE KP E    EPKPA PKP EPK  EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 891 KPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 950

Query: 90  KP-EPK-AEPKP-EPKKEE 105
           KP EPK AEPKP EPK  E
Sbjct: 951 KPAEPKPAEPKPAEPKPAE 969




 Score = 37.4 bits (85), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/79 (73%), Positives = 58/79 (73%), Gaps = 16/79 (20%)

Query: 43  KPAENKPQE----EPKPA-PKP-EPK-PEPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
           KPAE KP E    EPKPA PKP EPK  EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 906 KPAEPKPAEPKSAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 965

Query: 90  KP-EPK-AEPKP-EPKKEE 105
           KP EPK AEPKP EPK  E
Sbjct: 966 KPAEPKPAEPKPAEPKPAE 984




 Score = 37.4 bits (85), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/79 (73%), Positives = 58/79 (73%), Gaps = 16/79 (20%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPK-PEPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
            KPAE KP E    EPKPA PKP EPK  EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 926  KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 985

Query: 90   KP-EPK-AEPKP-EPKKEE 105
            KP EPK AEPKP EPK  E
Sbjct: 986  KPAEPKPAEPKPAEPKPAE 1004




 Score = 37.4 bits (85), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/79 (73%), Positives = 58/79 (73%), Gaps = 16/79 (20%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPK-PEPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
            KPAE KP E    EPKPA PKP EPK  EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 931  KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 990

Query: 90   KP-EPK-AEPKP-EPKKEE 105
            KP EPK AEPKP EPK  E
Sbjct: 991  KPAEPKPAEPKPAEPKPAE 1009




 Score = 37.4 bits (85), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/79 (73%), Positives = 58/79 (73%), Gaps = 16/79 (20%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPK-PEPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
            KPAE KP E    EPKPA PKP EPK  EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 936  KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 995

Query: 90   KP-EPK-AEPKP-EPKKEE 105
            KP EPK AEPKP EPK  E
Sbjct: 996  KPAEPKPAEPKPAEPKPAE 1014




 Score = 37.4 bits (85), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/79 (73%), Positives = 58/79 (73%), Gaps = 16/79 (20%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPK-PEPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
            KPAE KP E    EPKPA PKP EPK  EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 941  KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 1000

Query: 90   KP-EPK-AEPKP-EPKKEE 105
            KP EPK AEPKP EPK  E
Sbjct: 1001 KPAEPKPAEPKPAEPKPAE 1019




 Score = 37.4 bits (85), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/79 (73%), Positives = 58/79 (73%), Gaps = 16/79 (20%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPK-PEPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
            KPAE KP E    EPKPA PKP EPK  EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 946  KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 1005

Query: 90   KP-EPK-AEPKP-EPKKEE 105
            KP EPK AEPKP EPK  E
Sbjct: 1006 KPAEPKPAEPKPAEPKPAE 1024




 Score = 37.4 bits (85), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/79 (73%), Positives = 58/79 (73%), Gaps = 16/79 (20%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPK-PEPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
            KPAE KP E    EPKPA PKP EPK  EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 951  KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 1010

Query: 90   KP-EPK-AEPKP-EPKKEE 105
            KP EPK AEPKP EPK  E
Sbjct: 1011 KPAEPKPAEPKPAEPKPAE 1029




 Score = 37.4 bits (85), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/79 (73%), Positives = 58/79 (73%), Gaps = 16/79 (20%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPK-PEPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
            KPAE KP E    EPKPA PKP EPK  EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 961  KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 1020

Query: 90   KP-EPK-AEPKP-EPKKEE 105
            KP EPK AEPKP EPK  E
Sbjct: 1021 KPAEPKPAEPKPAEPKPAE 1039




 Score = 37.4 bits (85), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/79 (73%), Positives = 58/79 (73%), Gaps = 16/79 (20%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPK-PEPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
            KPAE KP E    EPKPA PKP EPK  EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 966  KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 1025

Query: 90   KP-EPK-AEPKP-EPKKEE 105
            KP EPK AEPKP EPK  E
Sbjct: 1026 KPAEPKPAEPKPAEPKPAE 1044




 Score = 37.4 bits (85), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/79 (73%), Positives = 58/79 (73%), Gaps = 16/79 (20%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPK-PEPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
            KPAE KP E    EPKPA PKP EPK  EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 971  KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 1030

Query: 90   KP-EPK-AEPKP-EPKKEE 105
            KP EPK AEPKP EPK  E
Sbjct: 1031 KPAEPKPAEPKPAEPKPAE 1049




 Score = 37.4 bits (85), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/79 (73%), Positives = 58/79 (73%), Gaps = 16/79 (20%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPK-PEPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
            KPAE KP E    EPKPA PKP EPK  EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 976  KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 1035

Query: 90   KP-EPK-AEPKP-EPKKEE 105
            KP EPK AEPKP EPK  E
Sbjct: 1036 KPAEPKPAEPKPAEPKPAE 1054




 Score = 37.4 bits (85), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/79 (73%), Positives = 58/79 (73%), Gaps = 16/79 (20%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPK-PEPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
            KPAE KP E    EPKPA PKP EPK  EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 981  KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 1040

Query: 90   KP-EPK-AEPKP-EPKKEE 105
            KP EPK AEPKP EPK  E
Sbjct: 1041 KPAEPKPAEPKPAEPKPAE 1059




 Score = 37.4 bits (85), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/79 (73%), Positives = 58/79 (73%), Gaps = 16/79 (20%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPK-PEPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
            KPAE KP E    EPKPA PKP EPK  EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 986  KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 1045

Query: 90   KP-EPK-AEPKP-EPKKEE 105
            KP EPK AEPKP EPK  E
Sbjct: 1046 KPAEPKPAEPKPAEPKPAE 1064




 Score = 37.0 bits (84), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 59/89 (66%), Positives = 59/89 (66%), Gaps = 26/89 (29%)

Query: 43  KPAENKPQE----EPKPA------PKP-EPKP-EPKP-EPKPA-PKP------EPKP-EP 81
           KPAE KP E    EPKPA      PKP EPKP EPKP EPKPA PKP      EPKP EP
Sbjct: 866 KPAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEP 925

Query: 82  KP-EPKP-EPKP-EPK-AEPKP-EPKKEE 105
           KP EPKP EPKP EPK AEPKP EPK  E
Sbjct: 926 KPAEPKPAEPKPAEPKPAEPKPAEPKPAE 954




 Score = 36.6 bits (83), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 58/85 (68%), Positives = 58/85 (68%), Gaps = 23/85 (27%)

Query: 43   KPAENKPQEEPKPA-PKP-EPKP-EPKP-EPKPA-PKP------EPKP------EPKP-E 84
            KPAE KP  EPKPA PKP EPKP EPKP EPKPA PKP      EPKP      EPKP E
Sbjct: 1031 KPAEPKPA-EPKPAEPKPAEPKPAEPKPAEPKPAEPKPVEPKAAEPKPAEPKSAEPKPAE 1089

Query: 85   PKP-EPKP-EPK-AEPKP-EPKKEE 105
            PKP EPKP EPK AEPKP EPK  E
Sbjct: 1090 PKPAEPKPAEPKSAEPKPAEPKPAE 1114




 Score = 35.8 bits (81), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 57/85 (67%), Positives = 58/85 (68%), Gaps = 14/85 (16%)

Query: 43   KPAENKPQEEPKPAPKPEPK-PEPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EPKP-EPK 94
            KPAE KP E PKPA   EPK  EPKP EPKPA PKP EPKP EPKP EPKP EPKP EPK
Sbjct: 1086 KPAEPKPAE-PKPA---EPKSAEPKPAEPKPAEPKPAEPKPVEPKPAEPKPAEPKPAEPK 1141

Query: 95   -AEPKP-EPKKEEAEEEEDIEEEEK 117
             AEPKP EPK  E +  E    E K
Sbjct: 1142 PAEPKPAEPKPAEPKSAEPKPAEPK 1166




 Score = 35.8 bits (81), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 61/96 (63%), Positives = 62/96 (64%), Gaps = 21/96 (21%)

Query: 43  KPAENKPQE----EPKPA-PKP-EPK-PEPKP-EPKPA-PKP-EPKP-EPKP------EP 85
           KPAE KP E    EPKPA PKP EPK  EPKP EPKPA PKP EPKP EPKP      EP
Sbjct: 831 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEP 890

Query: 86  KP-EPKP-EPK-AEPKP-EPKKEEAEEEEDIEEEEK 117
           KP EPKP EPK AEPKP EPK  E +  E    E K
Sbjct: 891 KPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEPK 926




 Score = 35.4 bits (80), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 58/84 (69%), Positives = 58/84 (69%), Gaps = 21/84 (25%)

Query: 43  KPAENKPQE----EPKPA-PKP-EPK-PEPKP-EPKPA-PKP-EPKP-EPKP------EP 85
           KPAE KP E    EPKPA PKP EPK  EPKP EPKPA PKP EPKP EPKP      EP
Sbjct: 726 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEP 785

Query: 86  KP-EPKP-EPK-AEPKP-EPKKEE 105
           KP EPKP EPK AEPKP EPK  E
Sbjct: 786 KPAEPKPAEPKPAEPKPAEPKPAE 809




 Score = 35.4 bits (80), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 58/84 (69%), Positives = 58/84 (69%), Gaps = 21/84 (25%)

Query: 43  KPAENKPQE----EPKPA-PKP-EPK-PEPKP-EPKPA------PKP-EPKP-EPKP-EP 85
           KPAE KP E    EPKPA PKP EPK  EPKP EPKPA      PKP EPKP EPKP EP
Sbjct: 741 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPAEP 800

Query: 86  KP-EPKP-EPK-AEPKP-EPKKEE 105
           KP EPKP EPK AEPKP EPK  E
Sbjct: 801 KPAEPKPAEPKPAEPKPAEPKPAE 824




 Score = 35.4 bits (80), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 58/84 (69%), Positives = 58/84 (69%), Gaps = 21/84 (25%)

Query: 43  KPAENKPQE----EPKPA-PKP-EPK-PEPKP-EPKPA------PKP-EPKP-EPKP-EP 85
           KPAE KP E    EPKPA PKP EPK  EPKP EPKPA      PKP EPKP EPKP EP
Sbjct: 846 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPAEP 905

Query: 86  KP-EPKP-EPK-AEPKP-EPKKEE 105
           KP EPKP EPK AEPKP EPK  E
Sbjct: 906 KPAEPKPAEPKSAEPKPAEPKPAE 929




 Score = 35.4 bits (80), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 58/84 (69%), Positives = 58/84 (69%), Gaps = 21/84 (25%)

Query: 43  KPAENKPQE----EPKPA-PKP-EPK-PEPKP-EPKPA-PKP-EPKP-EPKP------EP 85
           KPAE KP E    EPKPA PKP EPK  EPKP EPKPA PKP EPKP EPKP      EP
Sbjct: 861 KPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEP 920

Query: 86  KP-EPKP-EPK-AEPKP-EPKKEE 105
           KP EPKP EPK AEPKP EPK  E
Sbjct: 921 KPAEPKPAEPKPAEPKPAEPKPAE 944




 Score = 35.4 bits (80), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 58/84 (69%), Positives = 58/84 (69%), Gaps = 21/84 (25%)

Query: 43  KPAENKPQE----EPKPA-PKP-EPK-PEPKP-EPKPA------PKP-EPKP-EPKP-EP 85
           KPAE KP E    EPKPA PKP EPK  EPKP EPKPA      PKP EPKP EPKP EP
Sbjct: 876 KPAEPKPAEPKSAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPAEP 935

Query: 86  KP-EPKP-EPK-AEPKP-EPKKEE 105
           KP EPKP EPK AEPKP EPK  E
Sbjct: 936 KPAEPKPAEPKPAEPKPAEPKPAE 959




 Score = 34.7 bits (78), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 58/84 (69%), Positives = 58/84 (69%), Gaps = 21/84 (25%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPK-PEPKP-EPKPA------PKP-EPKP-EPKP-EP 85
            KPAE KP E    EPKPA PKP EPK  EPKP EPKPA      PKP EPKP EPKP EP
Sbjct: 1116 KPAEPKPVEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPVEP 1175

Query: 86   KP-EPKP-EPK-AEPKP-EPKKEE 105
            KP EPKP EPK AEPKP EPK  E
Sbjct: 1176 KPAEPKPAEPKPAEPKPAEPKSAE 1199




 Score = 34.7 bits (78), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 58/90 (64%), Positives = 58/90 (64%), Gaps = 28/90 (31%)

Query: 43   KPAENKPQEEPKPA-PKP------EPKP------EPKP-EPKPA-PKP------EPKP-E 80
            KPAE KP  EPKPA PKP      EPKP      EPKP EPKPA PKP      EPKP E
Sbjct: 1051 KPAEPKPA-EPKPAEPKPVEPKAAEPKPAEPKSAEPKPAEPKPAEPKPAEPKSAEPKPAE 1109

Query: 81   PKP-EPKP-EPKP-EPK-AEPKP-EPKKEE 105
            PKP EPKP EPKP EPK AEPKP EPK  E
Sbjct: 1110 PKPAEPKPAEPKPVEPKPAEPKPAEPKPAE 1139




 Score = 34.3 bits (77), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 58/94 (61%), Positives = 59/94 (62%), Gaps = 22/94 (23%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPK-PEPKP-EPKPAPKPEPKP-EPKP-EPKP----- 87
            KPAE KP E    EPKPA PKP EPK  EPKP EPKPA   EPKP EPKP EPKP     
Sbjct: 1016 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPA---EPKPAEPKPAEPKPVEPKA 1072

Query: 88   -EPKP-EPK-AEPKP-EPKKEEAEEEEDIEEEEK 117
             EPKP EPK AEPKP EPK  E +  E    E K
Sbjct: 1073 AEPKPAEPKSAEPKPAEPKPAEPKPAEPKSAEPK 1106




 Score = 33.9 bits (76), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 55/82 (67%), Positives = 55/82 (67%), Gaps = 22/82 (26%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPK-PEPKP------EPKPAPKPEPKP-EPKP-EPKP 87
            KPAE KP E    EPKPA PKP EPK  EPKP      EPKPA   EPKP EPKP EPKP
Sbjct: 1161 KPAEPKPAEPKPVEPKPAEPKPAEPKPAEPKPAEPKSAEPKPA---EPKPAEPKPAEPKP 1217

Query: 88   -EPKP-EPK-AEPKP-EPKKEE 105
             EPKP EPK AEPKP EPK  E
Sbjct: 1218 AEPKPAEPKSAEPKPAEPKPAE 1239




 Score = 33.9 bits (76), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 57/79 (72%), Positives = 57/79 (72%), Gaps = 16/79 (20%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPK-PEPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
            KPAE KP E    EPKPA PKP EPK  EPKP EPKPA PK  EPKP EPKP EPKP EP
Sbjct: 1266 KPAEPKPAEPKSAEPKPAEPKPAEPKSAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPAEP 1325

Query: 90   KP-EPK-AEPKP-EPKKEE 105
            KP EPK AEPKP EPK  E
Sbjct: 1326 KPAEPKSAEPKPAEPKSAE 1344




 Score = 33.9 bits (76), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 55/82 (67%), Positives = 55/82 (67%), Gaps = 22/82 (26%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPAPKPEPKP------EPKP-EPKP 87
            KPAE KP E    EPKPA PKP EPKP EPKP EPK A   EPKP      EPKP EPKP
Sbjct: 1296 KPAEPKPAEPKSAEPKPAEPKPAEPKPAEPKPAEPKSA---EPKPAEPKSAEPKPAEPKP 1352

Query: 88   -EPKP-EPK-AEPKP-EPKKEE 105
             EPKP EPK AEPKP EPK  E
Sbjct: 1353 AEPKPAEPKSAEPKPAEPKSGE 1374




 Score = 32.7 bits (73), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 61/101 (60%), Positives = 62/101 (61%), Gaps = 26/101 (25%)

Query: 43   KPAENKPQE----EPKPA------PKP-EPK-PEPKP------EPKPA-PKP-EPKP-EP 81
            KPAE KP E    EPKPA      PKP EPK  EPKP      EPKPA PKP EPKP EP
Sbjct: 1061 KPAEPKPVEPKAAEPKPAEPKSAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPAEP 1120

Query: 82   KP-EPKP-EPKP-EPK-AEPKP-EPKKEEAEEEEDIEEEEK 117
            KP EPKP EPKP EPK AEPKP EPK  E +  E    E K
Sbjct: 1121 KPVEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPK 1161




 Score = 32.7 bits (73), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 58/99 (58%), Positives = 59/99 (59%), Gaps = 27/99 (27%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPK-PEPKP-EPKPA------PKP-EPKP------EP 81
            KPAE KP E    EPKPA PKP EPK  EPKP EPKPA      PKP EPKP      EP
Sbjct: 1251 KPAEPKPAEPKSAEPKPAEPKPAEPKSAEPKPAEPKPAEPKSAEPKPAEPKPAEPKSAEP 1310

Query: 82   KP-EPKP-EPKPEPKAEPKP-EPKKEEAEEEEDIEEEEK 117
            KP EPKP EPKP   AEPKP EPK  E +  E    E K
Sbjct: 1311 KPAEPKPAEPKP---AEPKPAEPKSAEPKPAEPKSAEPK 1346




 Score = 32.3 bits (72), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 55/87 (63%), Positives = 55/87 (63%), Gaps = 27/87 (31%)

Query: 43   KPAENKPQE----EPKPAPKPEPKP------EPKP-EPKPA-PKP-EPKP-EPK-PEPKP 87
            KPAE KP E    EPKPA   EPKP      EPKP EPKPA PKP EPKP EPK  EPKP
Sbjct: 1281 KPAEPKPAEPKSAEPKPA---EPKPAEPKSAEPKPAEPKPAEPKPAEPKPAEPKSAEPKP 1337

Query: 88   ------EPKP-EPK-AEPKP-EPKKEE 105
                  EPKP EPK AEPKP EPK  E
Sbjct: 1338 AEPKSAEPKPAEPKPAEPKPAEPKSAE 1364




 Score = 32.0 bits (71), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 54/83 (65%), Positives = 54/83 (65%), Gaps = 24/83 (28%)

Query: 43   KPAENKPQEEPKPA-PKP-EPKP------EPKP-EPKPA-PKP-EPKP-EPK-PEPKP-- 87
            KPAE KP E PKPA PKP EPKP      EPKP EPKPA PKP EPKP EPK  EPKP  
Sbjct: 1201 KPAEPKPAE-PKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAE 1259

Query: 88   ----EPKPEPKAEPKP-EPKKEE 105
                EPKP   AEPKP EPK  E
Sbjct: 1260 PKSAEPKP---AEPKPAEPKSAE 1279




 Score = 32.0 bits (71), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 55/90 (61%), Positives = 56/90 (62%), Gaps = 19/90 (21%)

Query: 43   KPAENKPQEEPKPAPKPEPKP-EPKP-EPKPAPK--PEPKP-EPKP------EPKP-EPK 90
            KPAE KP E PKPA   EPKP EPKP EPKPA     EPKP EPKP      EPKP EPK
Sbjct: 1231 KPAEPKPAE-PKPA---EPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKSAEPKPAEPK 1286

Query: 91   P-EPK-AEPKP-EPKKEEAEEEEDIEEEEK 117
            P EPK AEPKP EPK  E +  E    E K
Sbjct: 1287 PAEPKSAEPKPAEPKPAEPKSAEPKPAEPK 1316




 Score = 32.0 bits (71), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 61/106 (57%), Positives = 62/106 (58%), Gaps = 31/106 (29%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPK-PEPKP-EPKPA------PKP-EPKP------EP 81
            KPAE KP E    EPKPA PKP EPK  EPKP EPKPA      PKP EPKP      EP
Sbjct: 1236 KPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKSAEPKPAEPKPAEPKSAEP 1295

Query: 82   KP-EPKP------EPKP-EPK-AEPKP-EPKKEEAEEEEDIEEEEK 117
            KP EPKP      EPKP EPK AEPKP EPK  E +  E    E K
Sbjct: 1296 KPAEPKPAEPKSAEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEPK 1341




 Score = 28.9 bits (63), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 45/76 (59%), Positives = 45/76 (59%), Gaps = 28/76 (36%)

Query: 43   KPAENKPQE----EPKPAPKPEPK-PEPKP-EPKPAPKPEPKP------EPKP------E 84
            KPAE KP E    EPKPA   EPK  EPKP EPKPA   EPKP      EPKP      E
Sbjct: 1321 KPAEPKPAEPKSAEPKPA---EPKSAEPKPAEPKPA---EPKPAEPKSAEPKPAEPKSGE 1374

Query: 85   PKP-EPKPEPKAEPKP 99
            PKP EPKP   AEPKP
Sbjct: 1375 PKPAEPKP---AEPKP 1387



>EAY09254.1 on XP_813586   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1748

 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/109 (61%), Positives = 69/109 (63%), Gaps = 20/109 (18%)

Query: 13  AGGFTLSLGNGTKIEIKPKVETKPVVLTTSKPAENKPQE----EPKPA-PKP-EPKP-EP 65
           +GG   +       E KP  E KP      KPAE KP E    EPKPA PKP EPKP EP
Sbjct: 747 SGGAASTPAEPKPAEPKP-AEPKPA---EPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 802

Query: 66  KP-EPKPA-PKP-EPKP-EPKP-EPKP-EPKP-EPK-AEPKP-EPKKEE 105
           KP EPKPA PKP EPKP EPKP EPKP EPKP EPK AEPKP EPK  E
Sbjct: 803 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAE 851




 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 60/83 (72%), Positives = 60/83 (72%), Gaps = 16/83 (19%)

Query: 39   LTTSKPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PKP-EPKP-EPKP-EPK 86
            L   KPAE KP E    EPKPA PKP EPKP EPKP EPKPA PKP EPKP EPKP EPK
Sbjct: 1369 LAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPK 1428

Query: 87   P-EPKP-EPK-AEPKP-EPKKEE 105
            P EPKP EPK AEPKP EPK  E
Sbjct: 1429 PAEPKPAEPKSAEPKPAEPKSAE 1451




 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 60/83 (72%), Positives = 60/83 (72%), Gaps = 16/83 (19%)

Query: 39   LTTSKPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PKP-EPKP-EPKP-EPK 86
            L   KPAE KP E    EPKPA PKP EPKP EPKP EPKPA PKP EPKP EPKP EPK
Sbjct: 1044 LAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPK 1103

Query: 87   P-EPKP-EPK-AEPKP-EPKKEE 105
            P EPKP EPK AEPKP EPK  E
Sbjct: 1104 PAEPKPAEPKPAEPKPAEPKPAE 1126




 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 60/83 (72%), Positives = 60/83 (72%), Gaps = 16/83 (19%)

Query: 39   LTTSKPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PKP-EPKP-EPKP-EPK 86
            L   KPAE KP E    EPKPA PKP EPKP EPKP EPKPA PKP EPKP EPKP EPK
Sbjct: 1229 LAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPK 1288

Query: 87   P-EPKP-EPK-AEPKP-EPKKEE 105
            P EPKP EPK AEPKP EPK  E
Sbjct: 1289 PAEPKPAEPKPAEPKPAEPKPAE 1311




 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 62/92 (67%), Positives = 63/92 (68%), Gaps = 16/92 (17%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
            KPAE KP E    EPKPA PKP EPKP EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 953  KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 1012

Query: 90   KP-EPK-AEPKP-EPKKEEAEEEEDIEEEEKF 118
            KP EPK AEPKP EPK  E +  E    E K 
Sbjct: 1013 KPAEPKPAEPKPAEPKSAEPKSAEPKPAEPKL 1044




 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 62/92 (67%), Positives = 63/92 (68%), Gaps = 16/92 (17%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
            KPAE KP E    EPKPA PKP EPKP EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 1093 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 1152

Query: 90   KP-EPK-AEPKP-EPKKEEAEEEEDIEEEEKF 118
            KP EPK AEPKP EPK  E +  E    E K 
Sbjct: 1153 KPAEPKPAEPKPAEPKSAEPKSAEPKPAEPKL 1184




 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 62/92 (67%), Positives = 63/92 (68%), Gaps = 16/92 (17%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
            KPAE KP E    EPKPA PKP EPKP EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 1278 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 1337

Query: 90   KP-EPK-AEPKP-EPKKEEAEEEEDIEEEEKF 118
            KP EPK AEPKP EPK  E +  E    E K 
Sbjct: 1338 KPAEPKPAEPKPAEPKSAEPKSAEPKPAEPKL 1369




 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 66/96 (68%), Positives = 66/96 (68%), Gaps = 20/96 (20%)

Query: 26  IEIKPKVETKPVVLTTSKPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PKP- 75
            E KP  E KPV     KPAE KP E    EPKPA PKP EPKP EPKP EPKPA PKP 
Sbjct: 885 AEPKP-AEPKPV---EPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPA 940

Query: 76  EPKP-EPKP-EPKP-EPKP-EPK-AEPKP-EPKKEE 105
           EPKP EPKP EPKP EPKP EPK AEPKP EPK  E
Sbjct: 941 EPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAE 976




 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 66/96 (68%), Positives = 66/96 (68%), Gaps = 20/96 (20%)

Query: 26  IEIKPKVETKPVVLTTSKPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PKP- 75
            E KP VE KP      KPAE KP E    EPKPA PKP EPKP EPKP EPKPA PKP 
Sbjct: 890 AEPKP-VEPKPA---EPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPA 945

Query: 76  EPKP-EPKP-EPKP-EPKP-EPK-AEPKP-EPKKEE 105
           EPKP EPKP EPKP EPKP EPK AEPKP EPK  E
Sbjct: 946 EPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAE 981




 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 65/96 (67%), Positives = 66/96 (68%), Gaps = 20/96 (20%)

Query: 26  IEIKPKVETKPVVLTTSKPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PKP- 75
           +E KP  E KP      KPAE KP E    EPKPA PKP EPKP EPKP EPKPA PKP 
Sbjct: 895 VEPKP-AEPKPA---EPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPA 950

Query: 76  EPKP-EPKP-EPKP-EPKP-EPK-AEPKP-EPKKEE 105
           EPKP EPKP EPKP EPKP EPK AEPKP EPK  E
Sbjct: 951 EPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAE 986




 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 62/91 (68%), Positives = 63/91 (69%), Gaps = 16/91 (17%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
            KPAE KP E    EPKPA PKP EPKP EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 948  KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 1007

Query: 90   KP-EPK-AEPKP-EPKKEEAEEEEDIEEEEK 117
            KP EPK AEPKP EPK  E +  E    E K
Sbjct: 1008 KPAEPKPAEPKPAEPKPAEPKSAEPKSAEPK 1038




 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 62/91 (68%), Positives = 63/91 (69%), Gaps = 16/91 (17%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
            KPAE KP E    EPKPA PKP EPKP EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 1088 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 1147

Query: 90   KP-EPK-AEPKP-EPKKEEAEEEEDIEEEEK 117
            KP EPK AEPKP EPK  E +  E    E K
Sbjct: 1148 KPAEPKPAEPKPAEPKPAEPKSAEPKSAEPK 1178




 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 62/91 (68%), Positives = 63/91 (69%), Gaps = 16/91 (17%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
            KPAE KP E    EPKPA PKP EPKP EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 1273 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 1332

Query: 90   KP-EPK-AEPKP-EPKKEEAEEEEDIEEEEK 117
            KP EPK AEPKP EPK  E +  E    E K
Sbjct: 1333 KPAEPKPAEPKPAEPKPAEPKSAEPKSAEPK 1363




 Score = 38.9 bits (89), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 66/102 (64%), Positives = 66/102 (64%), Gaps = 20/102 (19%)

Query: 20   LGNGTKIEIKPKVETKPVVLTTSKPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKP 71
            L      E KP  E KP      KPAE KP E    EPKPA PKP EPKP EPKP EPKP
Sbjct: 1044 LAEPKPAEPKP-AEPKPA---EPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKP 1099

Query: 72   A-PKP-EPKP-EPKP-EPKP-EPKP-EPK-AEPKP-EPKKEE 105
            A PKP EPKP EPKP EPKP EPKP EPK AEPKP EPK  E
Sbjct: 1100 AEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAE 1141




 Score = 38.9 bits (89), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 66/102 (64%), Positives = 66/102 (64%), Gaps = 20/102 (19%)

Query: 20   LGNGTKIEIKPKVETKPVVLTTSKPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKP 71
            L      E KP  E KP      KPAE KP E    EPKPA PKP EPKP EPKP EPKP
Sbjct: 1229 LAEPKPAEPKP-AEPKPA---EPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKP 1284

Query: 72   A-PKP-EPKP-EPKP-EPKP-EPKP-EPK-AEPKP-EPKKEE 105
            A PKP EPKP EPKP EPKP EPKP EPK AEPKP EPK  E
Sbjct: 1285 AEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAE 1326




 Score = 38.5 bits (88), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/79 (74%), Positives = 59/79 (74%), Gaps = 16/79 (20%)

Query: 43  KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
           KPAE KP E    EPKPA PKP EPKP EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 793 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 852

Query: 90  KP-EPK-AEPKP-EPKKEE 105
           KP EPK AEPKP EPK  E
Sbjct: 853 KPAEPKPAEPKPAEPKSAE 871




 Score = 38.5 bits (88), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 62/91 (68%), Positives = 63/91 (69%), Gaps = 16/91 (17%)

Query: 43  KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
           KPAE KP E    EPKPA PKP EPKP EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 788 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 847

Query: 90  KP-EPK-AEPKP-EPKKEEAEEEEDIEEEEK 117
           KP EPK AEPKP EPK  E +  E    E K
Sbjct: 848 KPAEPKPAEPKPAEPKPAEPKSAEPKPAEPK 878




 Score = 38.5 bits (88), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 62/91 (68%), Positives = 63/91 (69%), Gaps = 16/91 (17%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
            KPAE KP E    EPKPA PKP EPKP EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 943  KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 1002

Query: 90   KP-EPK-AEPKP-EPKKEEAEEEEDIEEEEK 117
            KP EPK AEPKP EPK  E +  E    E K
Sbjct: 1003 KPAEPKPAEPKPAEPKPAEPKPAEPKSAEPK 1033




 Score = 38.5 bits (88), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 62/91 (68%), Positives = 63/91 (69%), Gaps = 16/91 (17%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
            KPAE KP E    EPKPA PKP EPKP EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 1083 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 1142

Query: 90   KP-EPK-AEPKP-EPKKEEAEEEEDIEEEEK 117
            KP EPK AEPKP EPK  E +  E    E K
Sbjct: 1143 KPAEPKPAEPKPAEPKPAEPKPAEPKSAEPK 1173




 Score = 38.5 bits (88), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 62/91 (68%), Positives = 63/91 (69%), Gaps = 16/91 (17%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
            KPAE KP E    EPKPA PKP EPKP EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 1268 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 1327

Query: 90   KP-EPK-AEPKP-EPKKEEAEEEEDIEEEEK 117
            KP EPK AEPKP EPK  E +  E    E K
Sbjct: 1328 KPAEPKPAEPKPAEPKPAEPKPAEPKSAEPK 1358




 Score = 38.5 bits (88), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/79 (74%), Positives = 59/79 (74%), Gaps = 16/79 (20%)

Query: 43  KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
           KPAE KP E    EPKPA PKP EPKP EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 803 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 862

Query: 90  KP-EPK-AEPKP-EPKKEE 105
           KP EPK AEPKP EPK  E
Sbjct: 863 KPAEPKSAEPKPAEPKPAE 881




 Score = 38.5 bits (88), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/79 (74%), Positives = 59/79 (74%), Gaps = 16/79 (20%)

Query: 43  KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
           KPAE KP E    EPKPA PKP EPKP EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 883 KPAEPKPAEPKPVEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 942

Query: 90  KP-EPK-AEPKP-EPKKEE 105
           KP EPK AEPKP EPK  E
Sbjct: 943 KPAEPKPAEPKPAEPKPAE 961




 Score = 38.5 bits (88), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/79 (74%), Positives = 59/79 (74%), Gaps = 16/79 (20%)

Query: 43  KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
           KPAE KP E    EPKPA PKP EPKP EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 918 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 977

Query: 90  KP-EPK-AEPKP-EPKKEE 105
           KP EPK AEPKP EPK  E
Sbjct: 978 KPAEPKPAEPKPAEPKPAE 996




 Score = 38.5 bits (88), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/79 (74%), Positives = 59/79 (74%), Gaps = 16/79 (20%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
            KPAE KP E    EPKPA PKP EPKP EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 923  KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 982

Query: 90   KP-EPK-AEPKP-EPKKEE 105
            KP EPK AEPKP EPK  E
Sbjct: 983  KPAEPKPAEPKPAEPKPAE 1001




 Score = 38.5 bits (88), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/79 (74%), Positives = 59/79 (74%), Gaps = 16/79 (20%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
            KPAE KP E    EPKPA PKP EPKP EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 928  KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 987

Query: 90   KP-EPK-AEPKP-EPKKEE 105
            KP EPK AEPKP EPK  E
Sbjct: 988  KPAEPKPAEPKPAEPKPAE 1006




 Score = 38.5 bits (88), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/79 (74%), Positives = 59/79 (74%), Gaps = 16/79 (20%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
            KPAE KP E    EPKPA PKP EPKP EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 933  KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 992

Query: 90   KP-EPK-AEPKP-EPKKEE 105
            KP EPK AEPKP EPK  E
Sbjct: 993  KPAEPKPAEPKPAEPKPAE 1011




 Score = 38.5 bits (88), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/79 (74%), Positives = 59/79 (74%), Gaps = 16/79 (20%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
            KPAE KP E    EPKPA PKP EPKP EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 938  KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 997

Query: 90   KP-EPK-AEPKP-EPKKEE 105
            KP EPK AEPKP EPK  E
Sbjct: 998  KPAEPKPAEPKPAEPKPAE 1016




 Score = 38.5 bits (88), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/79 (74%), Positives = 59/79 (74%), Gaps = 16/79 (20%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
            KPAE KP E    EPKPA PKP EPKP EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 1068 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 1127

Query: 90   KP-EPK-AEPKP-EPKKEE 105
            KP EPK AEPKP EPK  E
Sbjct: 1128 KPAEPKPAEPKPAEPKPAE 1146




 Score = 38.5 bits (88), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/79 (74%), Positives = 59/79 (74%), Gaps = 16/79 (20%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
            KPAE KP E    EPKPA PKP EPKP EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 1073 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 1132

Query: 90   KP-EPK-AEPKP-EPKKEE 105
            KP EPK AEPKP EPK  E
Sbjct: 1133 KPAEPKPAEPKPAEPKPAE 1151




 Score = 38.5 bits (88), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/79 (74%), Positives = 59/79 (74%), Gaps = 16/79 (20%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
            KPAE KP E    EPKPA PKP EPKP EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 1078 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 1137

Query: 90   KP-EPK-AEPKP-EPKKEE 105
            KP EPK AEPKP EPK  E
Sbjct: 1138 KPAEPKPAEPKPAEPKPAE 1156




 Score = 38.5 bits (88), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/79 (74%), Positives = 59/79 (74%), Gaps = 16/79 (20%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
            KPAE KP E    EPKPA PKP EPKP EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 1253 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 1312

Query: 90   KP-EPK-AEPKP-EPKKEE 105
            KP EPK AEPKP EPK  E
Sbjct: 1313 KPAEPKPAEPKPAEPKPAE 1331




 Score = 38.5 bits (88), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/79 (74%), Positives = 59/79 (74%), Gaps = 16/79 (20%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
            KPAE KP E    EPKPA PKP EPKP EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 1258 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 1317

Query: 90   KP-EPK-AEPKP-EPKKEE 105
            KP EPK AEPKP EPK  E
Sbjct: 1318 KPAEPKPAEPKPAEPKPAE 1336




 Score = 38.5 bits (88), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/79 (74%), Positives = 59/79 (74%), Gaps = 16/79 (20%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
            KPAE KP E    EPKPA PKP EPKP EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 1263 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 1322

Query: 90   KP-EPK-AEPKP-EPKKEE 105
            KP EPK AEPKP EPK  E
Sbjct: 1323 KPAEPKPAEPKPAEPKPAE 1341




 Score = 38.5 bits (88), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/79 (74%), Positives = 59/79 (74%), Gaps = 16/79 (20%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
            KPAE KP E    EPKPA PKP EPKP EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 1518 KPAEPKPAEPKSAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 1577

Query: 90   KP-EPK-AEPKP-EPKKEE 105
            KP EPK AEPKP EPK  E
Sbjct: 1578 KPAEPKPAEPKPAEPKPAE 1596




 Score = 38.5 bits (88), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/79 (74%), Positives = 59/79 (74%), Gaps = 16/79 (20%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EP 89
            KPAE KP E    EPKPA PKP EPKP EPKP EPKPA PKP EPKP EPKP EPKP EP
Sbjct: 1543 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 1602

Query: 90   KP-EPK-AEPKP-EPKKEE 105
            KP EPK AEPKP EPK  E
Sbjct: 1603 KPAEPKSAEPKPAEPKPAE 1621




 Score = 38.1 bits (87), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/75 (77%), Positives = 58/75 (77%), Gaps = 13/75 (17%)

Query: 43   KPAENKPQEEPKPA-PKP-EPKP-EPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EPKP-E 92
            KPAE KP  EPKPA PKP EPKP EPKP EPKPA PKP EPKP EPKP EPKP EPKP E
Sbjct: 1538 KPAEPKPA-EPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAE 1596

Query: 93   PK-AEPKP-EPKKEE 105
            PK AEPKP EPK  E
Sbjct: 1597 PKPAEPKPAEPKSAE 1611




 Score = 38.1 bits (87), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 64/94 (68%), Positives = 66/94 (70%), Gaps = 16/94 (17%)

Query: 26  IEIKPKVETKPVVLTTS--KPAENKPQEEPKPA-PKP-EPKP-EPKP-EPKPA-PKP-EP 77
            E KP  E KP    ++  KPAE KP E PKPA PKP EPKP EPKP EPKPA PKP EP
Sbjct: 855 AEPKP-AEPKPAEPKSAEPKPAEPKPAE-PKPAEPKPAEPKPVEPKPAEPKPAEPKPAEP 912

Query: 78  KP-EPKP-EPKP-EPKP-EPK-AEPKP-EPKKEE 105
           KP EPKP EPKP EPKP EPK AEPKP EPK  E
Sbjct: 913 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAE 946




 Score = 36.6 bits (83), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 65/103 (63%), Positives = 67/103 (65%), Gaps = 24/103 (23%)

Query: 26   IEIKPKVETKPVVLTTS--KPAENKPQE----EPKPA-PKP-EPKP------EPKP-EPK 70
             E KP  E KP    ++  KPAE KP E    EPKPA PKP EPKP      EPKP EPK
Sbjct: 1480 AEPKP-AEPKPAEPKSAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEPK 1538

Query: 71   PA-PKP-EPKP-EPKP-EPKP-EPKP-EPK-AEPKP-EPKKEE 105
            PA PKP EPKP EPKP EPKP EPKP EPK AEPKP EPK  E
Sbjct: 1539 PAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAE 1581




 Score = 36.6 bits (83), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 59/84 (70%), Positives = 59/84 (70%), Gaps = 21/84 (25%)

Query: 43  KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PKP-EPKP------EPKP-EP 85
           KPAE KP E    EPKPA PKP EPKP EPKP EPKPA PKP EPKP      EPKP EP
Sbjct: 818 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEP 877

Query: 86  KP-EPKP-EPK-AEPKP-EPKKEE 105
           KP EPKP EPK AEPKP EPK  E
Sbjct: 878 KPAEPKPAEPKPAEPKPVEPKPAE 901




 Score = 36.6 bits (83), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 59/84 (70%), Positives = 59/84 (70%), Gaps = 21/84 (25%)

Query: 43  KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA------PKP-EPKP-EPKP-EP 85
           KPAE KP E    EPKPA PKP EPKP EPKP EPKPA      PKP EPKP EPKP EP
Sbjct: 828 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPAEP 887

Query: 86  KP-EPKP-EPK-AEPKP-EPKKEE 105
           KP EPKP EPK AEPKP EPK  E
Sbjct: 888 KPAEPKPVEPKPAEPKPAEPKPAE 911




 Score = 36.6 bits (83), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 59/84 (70%), Positives = 59/84 (70%), Gaps = 21/84 (25%)

Query: 43  KPAENKPQE----EPKPA-PKP-EPKP------EPKP-EPKPA-PKP-EPKP-EPKP-EP 85
           KPAE KP E    EPKPA PKP EPKP      EPKP EPKPA PKP EPKP EPKP EP
Sbjct: 838 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPAEPKPAEPKPVEP 897

Query: 86  KP-EPKP-EPK-AEPKP-EPKKEE 105
           KP EPKP EPK AEPKP EPK  E
Sbjct: 898 KPAEPKPAEPKPAEPKPAEPKPAE 921




 Score = 36.6 bits (83), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 59/84 (70%), Positives = 59/84 (70%), Gaps = 21/84 (25%)

Query: 43  KPAENKPQE----EPKPA-PKP------EPKP-EPKP-EPKPA-PKP-EPKP-EPKP-EP 85
           KPAE KP E    EPKPA PKP      EPKP EPKP EPKPA PKP EPKP EPKP EP
Sbjct: 843 KPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPAEPKPAEPKPVEPKPAEP 902

Query: 86  KP-EPKP-EPK-AEPKP-EPKKEE 105
           KP EPKP EPK AEPKP EPK  E
Sbjct: 903 KPAEPKPAEPKPAEPKPAEPKPAE 926




 Score = 36.6 bits (83), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 59/84 (70%), Positives = 59/84 (70%), Gaps = 21/84 (25%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PKP-EPKP------EPKP-EP 85
            KPAE KP E    EPKPA PKP EPKP EPKP EPKPA PKP EPKP      EPKP EP
Sbjct: 1558 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEP 1617

Query: 86   KP-EPKP-EPK-AEPKP-EPKKEE 105
            KP EPKP EPK AEPKP EPK  E
Sbjct: 1618 KPAEPKPAEPKPAEPKPAEPKPAE 1641




 Score = 36.2 bits (82), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 58/80 (72%), Positives = 58/80 (72%), Gaps = 18/80 (22%)

Query: 43   KPAENKPQEEPKPA-PKP-EPKP-EPKP-EPKPA-PKP------EPKP-EPKP-EPKP-E 88
            KPAE KP  EPKPA PKP EPKP EPKP EPKPA PKP      EPKP EPKP EPKP E
Sbjct: 1453 KPAEPKPA-EPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPAE 1511

Query: 89   PKP-EPK-AEPKP-EPKKEE 105
            PKP EPK AEPKP EPK  E
Sbjct: 1512 PKPAEPKPAEPKPAEPKSAE 1531




 Score = 35.8 bits (81), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 66/109 (60%), Positives = 68/109 (62%), Gaps = 24/109 (22%)

Query: 17  TLSLGNG----TKIEIKPKVETKPVVLTTSKPAENKPQE----EPKPA-PKP-EPKP-EP 65
           T S+ +G    T  E KP            KPAE KP E    EPKPA PKP EPKP EP
Sbjct: 742 TSSVPSGGAASTPAEPKPAEPK----PAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 797

Query: 66  KP-EPKPA-PKP-EPKP-EPKP-EPKP-EPKP-EPK-AEPKP-EPKKEE 105
           KP EPKPA PKP EPKP EPKP EPKP EPKP EPK AEPKP EPK  E
Sbjct: 798 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAE 846




 Score = 35.4 bits (80), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 56/82 (68%), Positives = 56/82 (68%), Gaps = 22/82 (26%)

Query: 43   KPAENKPQE----EPKPA------PKP-EPKP-EPKP-EPKPAPKPEPKP-EPKP-EPKP 87
            KPAE KP E    EPKPA      PKP EPKP EPKP EPKPA   EPKP EPKP EPKP
Sbjct: 1428 KPAEPKPAEPKSAEPKPAEPKSAEPKPAEPKPAEPKPAEPKPA---EPKPAEPKPAEPKP 1484

Query: 88   -EPKP-EPK-AEPKP-EPKKEE 105
             EPKP EPK AEPKP EPK  E
Sbjct: 1485 AEPKPAEPKSAEPKPAEPKPAE 1506




 Score = 35.4 bits (80), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 56/82 (68%), Positives = 56/82 (68%), Gaps = 22/82 (26%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPKP------EPKP-EPKPAPKPEPKP-EPKP-EPKP 87
            KPAE KP E    EPKPA PKP EPKP      EPKP EPKPA   EPKP EPKP EPKP
Sbjct: 1463 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPA---EPKPAEPKPAEPKP 1519

Query: 88   -EPKP-EPK-AEPKP-EPKKEE 105
             EPKP EPK AEPKP EPK  E
Sbjct: 1520 AEPKPAEPKSAEPKPAEPKPAE 1541




 Score = 35.0 bits (79), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 66/112 (58%), Positives = 66/112 (58%), Gaps = 30/112 (26%)

Query: 20   LGNGTKIEIKPKVETKPVVLTTSKPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKP 71
            L      E KP  E KP      KPAE KP E    EPKPA PKP EPKP EPKP EPKP
Sbjct: 1369 LAEPKPAEPKP-AEPKPA---EPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKP 1424

Query: 72   A-PKP-EPKP------EPKP------EPKP-EPKP-EPK-AEPKP-EPKKEE 105
            A PKP EPKP      EPKP      EPKP EPKP EPK AEPKP EPK  E
Sbjct: 1425 AEPKPAEPKPAEPKSAEPKPAEPKSAEPKPAEPKPAEPKPAEPKPAEPKPAE 1476




 Score = 34.7 bits (78), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 59/89 (66%), Positives = 59/89 (66%), Gaps = 26/89 (29%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPKP------EPKP------EPKPA-PKP-EPKP-EP 81
            KPAE KP E    EPKPA PKP EPKP      EPKP      EPKPA PKP EPKP EP
Sbjct: 1408 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEPKSAEPKPAEPKPAEPKPAEP 1467

Query: 82   KP-EPKP-EPKP-EPK-AEPKP-EPKKEE 105
            KP EPKP EPKP EPK AEPKP EPK  E
Sbjct: 1468 KPAEPKPAEPKPAEPKPAEPKPAEPKSAE 1496




 Score = 34.7 bits (78), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 62/101 (61%), Positives = 63/101 (62%), Gaps = 26/101 (25%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA------PKP------EPKP-EP 81
            KPAE KP E    EPKPA PKP EPKP EPKP EPKPA      PKP      EPKP EP
Sbjct: 1398 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEPKSAEPKPAEP 1457

Query: 82   KP-EPKP-EPKP-EPK-AEPKP-EPKKEEAEEEEDIEEEEK 117
            KP EPKP EPKP EPK AEPKP EPK  E +  E    E K
Sbjct: 1458 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPK 1498




 Score = 34.7 bits (78), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 62/101 (61%), Positives = 63/101 (62%), Gaps = 26/101 (25%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPKP-EPKP------EPKPA------PKP-EPKP-EP 81
            KPAE KP E    EPKPA PKP EPKP EPKP      EPKPA      PKP EPKP EP
Sbjct: 1403 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEPKSAEPKPAEPKPAEP 1462

Query: 82   KP-EPKP-EPKP-EPK-AEPKP-EPKKEEAEEEEDIEEEEK 117
            KP EPKP EPKP EPK AEPKP EPK  E +  E    E K
Sbjct: 1463 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEPK 1503




 Score = 34.7 bits (78), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 59/89 (66%), Positives = 59/89 (66%), Gaps = 26/89 (29%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PKP------EPKP------EP 81
            KPAE KP E    EPKPA PKP EPKP EPKP EPKPA PKP      EPKP      EP
Sbjct: 1393 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEPKSAEP 1452

Query: 82   KP-EPKP-EPKP-EPK-AEPKP-EPKKEE 105
            KP EPKP EPKP EPK AEPKP EPK  E
Sbjct: 1453 KPAEPKPAEPKPAEPKPAEPKPAEPKPAE 1481




 Score = 34.3 bits (77), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 60/98 (61%), Positives = 60/98 (61%), Gaps = 31/98 (31%)

Query: 39   LTTSKPAENKPQE----EPKPA-PKP-----------EPKP------EPKP-EPKPA-PK 74
            L   KPAE KP E    EPKPA PKP           EPKP      EPKP EPKPA PK
Sbjct: 1184 LAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKSAEPKPAEPKLAEPKPAEPKPAEPK 1243

Query: 75   P-EPKP-EPKP-EPKP-EPKP-EPK-AEPKP-EPKKEE 105
            P EPKP EPKP EPKP EPKP EPK AEPKP EPK  E
Sbjct: 1244 PAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAE 1281




 Score = 34.3 bits (77), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 67/115 (58%), Positives = 70/115 (60%), Gaps = 24/115 (20%)

Query: 26   IEIKPKVETKPVVLTTSKP--AENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PK 74
             E KP  E KP     ++P  AE KP E    EPKPA PKP EPKP EPKP EPKPA PK
Sbjct: 1420 AEPKP-AEPKPAEPKPAEPKSAEPKPAEPKSAEPKPAEPKPAEPKPAEPKPAEPKPAEPK 1478

Query: 75   P-EPKP-EPKP------EPKP-EPKP-EPK-AEPKP-EPKKEEAEEEEDIEEEEK 117
            P EPKP EPKP      EPKP EPKP EPK AEPKP EPK  E +  E    E K
Sbjct: 1479 PAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPK 1533




 Score = 32.7 bits (73), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 62/106 (58%), Positives = 63/106 (59%), Gaps = 31/106 (29%)

Query: 43   KPAENKPQE--------------EPKPA------PKP-EPKP-EPKP-EPKPA-PKP-EP 77
            KPAE KP E              EPKPA      PKP EPKP EPKP EPKPA PKP EP
Sbjct: 1338 KPAEPKPAEPKPAEPKSAEPKSAEPKPAEPKLAEPKPAEPKPAEPKPAEPKPAEPKPAEP 1397

Query: 78   KP-EPKP-EPKP-EPKP-EPK-AEPKP-EPKKEEAEEEEDIEEEEK 117
            KP EPKP EPKP EPKP EPK AEPKP EPK  E +  E    E K
Sbjct: 1398 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPK 1443




 Score = 32.7 bits (73), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 59/94 (62%), Positives = 59/94 (62%), Gaps = 31/94 (32%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PKP-EPKP-----------EP 81
            KPAE KP E    EPKPA PKP EPKP EPKP EPKPA PKP EPKP           EP
Sbjct: 978  KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKSAEP 1037

Query: 82   KP------EPKP-EPKP-EPK-AEPKP-EPKKEE 105
            KP      EPKP EPKP EPK AEPKP EPK  E
Sbjct: 1038 KPAEPKLAEPKPAEPKPAEPKPAEPKPAEPKPAE 1071




 Score = 32.7 bits (73), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 59/94 (62%), Positives = 59/94 (62%), Gaps = 31/94 (32%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PKP-----------EPKP--- 79
            KPAE KP E    EPKPA PKP EPKP EPKP EPKPA PKP           EPKP   
Sbjct: 983  KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKSAEPKPAEP 1042

Query: 80   ---EPKP-EPKP-EPKP-EPK-AEPKP-EPKKEE 105
               EPKP EPKP EPKP EPK AEPKP EPK  E
Sbjct: 1043 KLAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAE 1076




 Score = 32.7 bits (73), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 59/94 (62%), Positives = 59/94 (62%), Gaps = 31/94 (32%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-----------PKP------EP 77
            KPAE KP E    EPKPA PKP EPKP EPKP EPKPA           PKP      EP
Sbjct: 988  KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKSAEPKPAEPKLAEP 1047

Query: 78   KP-EPKP-EPKP-EPKP-EPK-AEPKP-EPKKEE 105
            KP EPKP EPKP EPKP EPK AEPKP EPK  E
Sbjct: 1048 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAE 1081




 Score = 32.7 bits (73), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 59/94 (62%), Positives = 59/94 (62%), Gaps = 31/94 (32%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPKP-EPKP-----------EPKPA------PKP-EP 77
            KPAE KP E    EPKPA PKP EPKP EPKP           EPKPA      PKP EP
Sbjct: 993  KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKSAEPKPAEPKLAEPKPAEP 1052

Query: 78   KP-EPKP-EPKP-EPKP-EPK-AEPKP-EPKKEE 105
            KP EPKP EPKP EPKP EPK AEPKP EPK  E
Sbjct: 1053 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAE 1086




 Score = 32.7 bits (73), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 59/94 (62%), Positives = 59/94 (62%), Gaps = 31/94 (32%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPKP-----------EPKP------EPKPA-PKP-EP 77
            KPAE KP E    EPKPA PKP EPKP           EPKP      EPKPA PKP EP
Sbjct: 998  KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKSAEPKPAEPKLAEPKPAEPKPAEP 1057

Query: 78   KP-EPKP-EPKP-EPKP-EPK-AEPKP-EPKKEE 105
            KP EPKP EPKP EPKP EPK AEPKP EPK  E
Sbjct: 1058 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAE 1091




 Score = 32.7 bits (73), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 59/94 (62%), Positives = 59/94 (62%), Gaps = 31/94 (32%)

Query: 43   KPAENKPQE----EPKPA-PKP-----------EPKP------EPKP-EPKPA-PKP-EP 77
            KPAE KP E    EPKPA PKP           EPKP      EPKP EPKPA PKP EP
Sbjct: 1003 KPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKSAEPKPAEPKLAEPKPAEPKPAEPKPAEP 1062

Query: 78   KP-EPKP-EPKP-EPKP-EPK-AEPKP-EPKKEE 105
            KP EPKP EPKP EPKP EPK AEPKP EPK  E
Sbjct: 1063 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAE 1096




 Score = 32.7 bits (73), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 59/94 (62%), Positives = 59/94 (62%), Gaps = 31/94 (32%)

Query: 43   KPAENKPQE--------------EPKPA------PKP-EPKP-EPKP-EPKPA-PKP-EP 77
            KPAE KP E              EPKPA      PKP EPKP EPKP EPKPA PKP EP
Sbjct: 1013 KPAEPKPAEPKPAEPKSAEPKSAEPKPAEPKLAEPKPAEPKPAEPKPAEPKPAEPKPAEP 1072

Query: 78   KP-EPKP-EPKP-EPKP-EPK-AEPKP-EPKKEE 105
            KP EPKP EPKP EPKP EPK AEPKP EPK  E
Sbjct: 1073 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAE 1106




 Score = 32.7 bits (73), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 59/94 (62%), Positives = 59/94 (62%), Gaps = 31/94 (32%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-PKP-----------EPKP--- 79
            KPAE KP E    EPKPA PKP EPKP EPKP EPKPA PKP           EPKP   
Sbjct: 1308 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKSAEPKPAEP 1367

Query: 80   ---EPKP-EPKP-EPKP-EPK-AEPKP-EPKKEE 105
               EPKP EPKP EPKP EPK AEPKP EPK  E
Sbjct: 1368 KLAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAE 1401




 Score = 32.7 bits (73), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 59/94 (62%), Positives = 59/94 (62%), Gaps = 31/94 (32%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-----------PKP------EP 77
            KPAE KP E    EPKPA PKP EPKP EPKP EPKPA           PKP      EP
Sbjct: 1313 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKSAEPKPAEPKLAEP 1372

Query: 78   KP-EPKP-EPKP-EPKP-EPK-AEPKP-EPKKEE 105
            KP EPKP EPKP EPKP EPK AEPKP EPK  E
Sbjct: 1373 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAE 1406




 Score = 32.7 bits (73), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 59/94 (62%), Positives = 59/94 (62%), Gaps = 31/94 (32%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPKP-EPKP-----------EPKPA------PKP-EP 77
            KPAE KP E    EPKPA PKP EPKP EPKP           EPKPA      PKP EP
Sbjct: 1318 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKSAEPKPAEPKLAEPKPAEP 1377

Query: 78   KP-EPKP-EPKP-EPKP-EPK-AEPKP-EPKKEE 105
            KP EPKP EPKP EPKP EPK AEPKP EPK  E
Sbjct: 1378 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAE 1411




 Score = 32.7 bits (73), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 59/94 (62%), Positives = 59/94 (62%), Gaps = 31/94 (32%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPKP-----------EPKP------EPKPA-PKP-EP 77
            KPAE KP E    EPKPA PKP EPKP           EPKP      EPKPA PKP EP
Sbjct: 1323 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKSAEPKPAEPKLAEPKPAEPKPAEP 1382

Query: 78   KP-EPKP-EPKP-EPKP-EPK-AEPKP-EPKKEE 105
            KP EPKP EPKP EPKP EPK AEPKP EPK  E
Sbjct: 1383 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAE 1416




 Score = 32.7 bits (73), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 59/94 (62%), Positives = 59/94 (62%), Gaps = 31/94 (32%)

Query: 43   KPAENKPQE----EPKPA-PKP-----------EPKP------EPKP-EPKPA-PKP-EP 77
            KPAE KP E    EPKPA PKP           EPKP      EPKP EPKPA PKP EP
Sbjct: 1328 KPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKSAEPKPAEPKLAEPKPAEPKPAEPKPAEP 1387

Query: 78   KP-EPKP-EPKP-EPKP-EPK-AEPKP-EPKKEE 105
            KP EPKP EPKP EPKP EPK AEPKP EPK  E
Sbjct: 1388 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAE 1421




 Score = 32.7 bits (73), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 59/105 (56%), Positives = 60/105 (57%), Gaps = 32/105 (30%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA-----------PKP------EP 77
            KPAE KP E    EPKPA PKP EPKP EPKP EPKPA           PKP      EP
Sbjct: 1128 KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKSAEPKPAEPKLAEP 1187

Query: 78   KP-EPKP-EPKP-EPKPEPKAEPKP-EPKKEEAEEEEDIEEEEKF 118
            KP EPKP EPKP EPKP   AEPKP EPK  E +  E    E K 
Sbjct: 1188 KPAEPKPAEPKPAEPKP---AEPKPAEPKSAEPKSAEPKPAEPKL 1229




 Score = 30.0 bits (66), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 64/123 (52%), Positives = 68/123 (55%), Gaps = 35/123 (28%)

Query: 26   IEIKPKVETKPVVLTTSKP--AENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPA--- 72
             E KP  E KP    +++P  AE KP E    EPKPA PKP EPKP EPKP EPKPA   
Sbjct: 1155 AEPKP-AEPKPAEPKSAEPKSAEPKPAEPKLAEPKPAEPKPAEPKPAEPKPAEPKPAEPK 1213

Query: 73   --------PKP------EPKP-EPKP-EPKP-EPKPEPKAEPKP-EPKKEEAEEEEDIEE 114
                    PKP      EPKP EPKP EPKP EPKP   AEPKP EPK  E +  E    
Sbjct: 1214 SAEPKSAEPKPAEPKLAEPKPAEPKPAEPKPAEPKP---AEPKPAEPKPAEPKPAEPKPA 1270

Query: 115  EEK 117
            E K
Sbjct: 1271 EPK 1273




 Score = 28.5 bits (62), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 55/83 (66%), Positives = 58/83 (69%), Gaps = 14/83 (16%)

Query: 37  VVLTTSKPAENKPQ--EEPKPA-PKP-EPKP-EPKP-EPKPA-PKP-EPKP-EPKP-EPK 86
            + T+S P+        EPKPA PKP EPKP EPKP EPKPA PKP EPKP EPKP EPK
Sbjct: 739 TLNTSSVPSGGAASTPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPK 798

Query: 87  P-EPKP-EPK-AEPKP-EPKKEE 105
           P EPKP EPK AEPKP EPK  E
Sbjct: 799 PAEPKPAEPKPAEPKPAEPKPAE 821




 Score = 27.3 bits (59), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 42/64 (65%), Gaps = 12/64 (18%)

Query: 60  EPKP-EPKP-EPKPAPKPEPKP-EPKP-EPKP-EPKPEPKAEPKP-EPKKEEAEEEEDIE 113
           EPKP EPKP EPKPA   EPKP EPKP EPKP EPKP   AEPKP EPK  E +  E   
Sbjct: 756 EPKPAEPKPAEPKPA---EPKPAEPKPAEPKPAEPKP---AEPKPAEPKPAEPKPAEPKP 809

Query: 114 EEEK 117
            E K
Sbjct: 810 AEPK 813



>EAY09254.1 on XP_820186   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1133

 Score = 37.0 bits (84), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 59/107 (55%), Positives = 60/107 (56%), Gaps = 31/107 (28%)

Query: 42  SKPAENKPQE----EPKPA------PKP-EPK-PEPKP------EPKPA------PKP-E 76
           SK AE KP E    EPKPA      PKP EPK  EPKP      EPKPA      PKP E
Sbjct: 837 SKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAESKSAGPKPAE 896

Query: 77  PKP-EPKP-EPKP-EPKP-EPK-AEPKP-EPKKEEAEEEEDIEEEEK 117
           PK  EPKP EPK  EPKP EPK AEPKP EPK  E +  E    E K
Sbjct: 897 PKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPNSAEPK 943




 Score = 36.6 bits (83), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 66/146 (45%), Positives = 72/146 (49%), Gaps = 30/146 (20%)

Query: 43   KPAENKPQEEPKPA------PKP-EPK-PEPKP-EPKPA-PKP-EPKP-EPKP-EPKP-E 88
            KPAE K   EPKPA      PKP EPK  EPKP EPK A PKP EPK  EPKP EPK  E
Sbjct: 943  KPAEPK-SAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAE 1001

Query: 89   PKP-EPK-AEPKP-EPKKEEAEEEEDIEEEEKFEGEILDETAKKHF--------NIVF-- 135
            PKP EPK AEPKP EPK  E +  E             D+ A   F        +++F  
Sbjct: 1002 PKPAEPKSAEPKPAEPKSAEPKPAEPNAATSSAREGTADQPASATFSDGHEAVTSVIFSS 1061

Query: 136  --IGHVDAGKSTLCGHVLYQAGCVDQ 159
              I  V A  S     V  + G V Q
Sbjct: 1062 AAITDVGASSSDDAQTVGTEGGAVMQ 1087




 Score = 36.6 bits (83), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 56/92 (60%), Positives = 57/92 (61%), Gaps = 18/92 (19%)

Query: 43  KPAENKPQEEPKPA-PKP-EPKP-EPK-PEPKPA------PKP-EPKP-EPKP-EPKP-E 88
           KPAE K   EPKPA PK  EPKP EPK  EPKPA      PKP EPK  EPKP EPK  E
Sbjct: 903 KPAEPK-SAEPKPAEPKSAEPKPAEPKSAEPKPAEPNSAEPKPAEPKSAEPKPAEPKSAE 961

Query: 89  PKP-EPK-AEPKP-EPKKEEAEEEEDIEEEEK 117
           PKP EPK AEPKP EPK  E +  E    E K
Sbjct: 962 PKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPK 993




 Score = 36.6 bits (83), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 56/92 (60%), Positives = 57/92 (61%), Gaps = 18/92 (19%)

Query: 43   KPAENKPQEEPKPA------PKP-EPK-PEPKP-EPKPA-PKP-EPKP-EPKP-EPKP-E 88
            KPAE K   EPKPA      PKP EPK  EPKP EPK A PKP EPK  EPKP EPK  E
Sbjct: 923  KPAEPK-SAEPKPAEPNSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAE 981

Query: 89   PKP-EPK-AEPKP-EPKKEEAEEEEDIEEEEK 117
            PKP EPK AEPKP EPK  E +  E    E K
Sbjct: 982  PKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPK 1013




 Score = 36.2 bits (82), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 48/76 (63%), Positives = 49/76 (64%), Gaps = 20/76 (26%)

Query: 43  KPAENKPQEEPKPAPKPEPKP-EPKP------EPKPAPKPEPKP-EPKP-EPKP-EPKP- 91
           KPAE+K   EPKPA   EPK  EPKP      EPKPA   EPK  EPKP EPK  EPKP 
Sbjct: 813 KPAESK-SAEPKPA---EPKSAEPKPAESKSAEPKPA---EPKSAEPKPAEPKSAEPKPA 865

Query: 92  EPK-AEPKP-EPKKEE 105
           EPK AEPKP EPK  E
Sbjct: 866 EPKSAEPKPAEPKSAE 881




 Score = 36.2 bits (82), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 53/96 (55%), Positives = 54/96 (56%), Gaps = 21/96 (21%)

Query: 43  KPAENKPQEEPKPAPKP------EPKP-EPKP-EPKPA-PKP-EPKP-EPKP-EPKP--- 87
           K AE KP E     PKP      EPKP EPK  EPKPA PK  EPKP EPK  EPKP   
Sbjct: 878 KSAEPKPAESKSAGPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEP 937

Query: 88  ---EPKP-EPK-AEPKP-EPKKEEAEEEEDIEEEEK 117
              EPKP EPK AEPKP EPK  E +  E    E K
Sbjct: 938 NSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPK 973




 Score = 36.2 bits (82), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 57/96 (59%), Positives = 58/96 (60%), Gaps = 21/96 (21%)

Query: 43   KPAENKPQE----EPKPA------PKP-EPKP-EPKP-EPKPA-PKP-EPKP-EPKP-EP 85
            K AE KP E    EPKPA      PKP EPK  EPKP EPK A PKP EPK  EPKP EP
Sbjct: 928  KSAEPKPAEPNSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEP 987

Query: 86   KP-EPKP-EPK-AEPKP-EPKKEEAEEEEDIEEEEK 117
            K  EPKP EPK AEPKP EPK  E +  E    E K
Sbjct: 988  KSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPK 1023




 Score = 35.8 bits (81), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 57/102 (55%), Positives = 58/102 (56%), Gaps = 28/102 (27%)

Query: 43  KPAENKPQEEPKPA------PKP-EPK-PEPKP------EPKPA-PKP-EPKP------E 80
           KPAE K   EPKPA      PKP EPK  EPKP      EPKPA PK  EPKP      E
Sbjct: 783 KPAEPK-SAEPKPAEPKSAEPKPAEPKSAEPKPAESKSAEPKPAEPKSAEPKPAESKSAE 841

Query: 81  PKP-EPKP-EPKP-EPK-AEPKP-EPKKEEAEEEEDIEEEEK 117
           PKP EPK  EPKP EPK AEPKP EPK  E +  E    E K
Sbjct: 842 PKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPK 883




 Score = 35.4 bits (80), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 54/95 (56%), Positives = 55/95 (57%), Gaps = 24/95 (25%)

Query: 43  KPAENKPQEEPKPAPKPEPK-PEPKP-EPKPA-PKP-EPKP-EPKP------EPKP---- 87
           KPAE K   EPKPA   EPK  EPKP EPK A PKP EPK  EPKP      EPKP    
Sbjct: 893 KPAEPK-SAEPKPA---EPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPNSAEPKPAEPK 948

Query: 88  --EPKP-EPK-AEPKP-EPKKEEAEEEEDIEEEEK 117
             EPKP EPK AEPKP EPK  E +  E    E K
Sbjct: 949 SAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPK 983




 Score = 32.0 bits (71), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 39/78 (50%), Positives = 42/78 (53%), Gaps = 10/78 (12%)

Query: 43  KPAENKPQEEPKPAPKPEPKP-EPKP-EPKPAPKPEPKPEPKPEPKPEPKPEPKAEPKP- 99
           KPAE K   EPKPA   EPK  EPKP EPK A   EPKP      +P+P     AEPKP 
Sbjct: 773 KPAEPK-SAEPKPA---EPKSAEPKPAEPKSA---EPKPAEPKSAEPKPAESKSAEPKPA 825

Query: 100 EPKKEEAEEEEDIEEEEK 117
           EPK  E +  E    E K
Sbjct: 826 EPKSAEPKPAESKSAEPK 843




 Score = 29.6 bits (65), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 53/97 (54%), Positives = 56/97 (57%), Gaps = 19/97 (19%)

Query: 40  TTSKPAENKPQ--EEPKPA-PKP-EPKPE-PKP-EPKPA-PKP-EPKP-EPKP-EPKP-E 88
           T+S P+   P    EPK A PKP EPK   PKP EPK A PKP EPK  EPKP EPK  E
Sbjct: 742 TSSVPSGGAPSTPAEPKSAGPKPAEPKSAGPKPAEPKSAEPKPAEPKSAEPKPAEPKSAE 801

Query: 89  PKP-EPK-AEPKP------EPKKEEAEEEEDIEEEEK 117
           PKP EPK AEPKP      EPK  E +  E    E K
Sbjct: 802 PKPAEPKSAEPKPAESKSAEPKPAEPKSAEPKPAESK 838



>EAY09254.1 on XP_820135   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1519

 Score = 35.4 bits (80), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 57/86 (66%), Positives = 57/86 (66%), Gaps = 23/86 (26%)

Query: 42   SKPAENKPQEEPKPA-PKP-EPKP-EPKP-EPKPA-PKP------EPKP-EPK-PEPKP- 87
            SKPAE KP E PKPA PKP EPKP EPKP EPKPA PKP      E KP EPK  EPKP 
Sbjct: 1178 SKPAEPKPAE-PKPAGPKPAEPKPAEPKPAEPKPAGPKPAEQKSAESKPAEPKSAEPKPA 1236

Query: 88   -----EPKP-EPK-AEPKP-EPKKEE 105
                 EPKP EPK AEPKP EPK  E
Sbjct: 1237 EQKSAEPKPAEPKSAEPKPAEPKSAE 1262




 Score = 33.9 bits (76), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 58/99 (58%), Positives = 58/99 (58%), Gaps = 36/99 (36%)

Query: 43  KPAENKPQE----EPKPA------PKP-EPKP-EPKP------EPKPA------PKP-EP 77
           KPAE KP E    EPKPA      PKP EPK  EPKP      EPKPA      PKP EP
Sbjct: 719 KPAEPKPAEPKSAEPKPAEQKSAEPKPAEPKSAEPKPTEPKSAEPKPAEPKSAEPKPAEP 778

Query: 78  KP-EPKP------EPKP-EPKP-EPK-AEPKP-EPKKEE 105
           KP EPKP      EPKP EPKP EPK AEPKP EPK  E
Sbjct: 779 KPAEPKPAEPKSAEPKPAEPKPAEPKSAEPKPAEPKSAE 817




 Score = 33.9 bits (76), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 60/119 (50%), Positives = 66/119 (55%), Gaps = 35/119 (29%)

Query: 22  NGTKIEIKP--KVETKPVVLTTSKPAENKPQE-EPKPA-PKP-EPK-PEPKP------EP 69
           N  K+ I P    E KP    +++P   +P+  EPKPA PKP EPK  EPKP      EP
Sbjct: 684 NANKVTIPPPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKPAEPKSAEPKPAEQKSAEP 743

Query: 70  KPA------PKP------EPKP------EPKP-EPKP-EPKP-EPK-AEPKP-EPKKEE 105
           KPA      PKP      EPKP      EPKP EPKP EPKP EPK AEPKP EPK  E
Sbjct: 744 KPAEPKSAEPKPTEPKSAEPKPAEPKSAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAE 802




 Score = 32.3 bits (72), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 51/78 (65%), Positives = 51/78 (65%), Gaps = 18/78 (23%)

Query: 40  TTSKPAENKPQE----EPKPAPKPEPKP-EPKP-EPKPAPKPEPKP-EPKP-EPK-PEPK 90
           T  K AE KP E    EPKPA   EPKP EPKP EPK A   EPKP EPKP EPK  EPK
Sbjct: 756 TEPKSAEPKPAEPKSAEPKPA---EPKPAEPKPAEPKSA---EPKPAEPKPAEPKSAEPK 809

Query: 91  P-EPK-AEPKP-EPKKEE 105
           P EPK AEPKP EPK  E
Sbjct: 810 PAEPKSAEPKPAEPKSAE 827




 Score = 31.6 bits (70), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 56/94 (59%), Positives = 57/94 (60%), Gaps = 22/94 (23%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPKP------EPKP-EPKPAPKPEPKP-EPKP-EPKP 87
            KPAE KP E    EPKPA PK  EPKP      E KP EPKPA   EPKP EPKP EPKP
Sbjct: 1274 KPAEPKPAEPKSAEPKPAEPKSAEPKPAEQKSAESKPAEPKPA---EPKPAEPKPAEPKP 1330

Query: 88   -EPKP-EPK-AEPKP-EPKKEEAEEEEDIEEEEK 117
             EPK  EPK AEPKP EPK  E +  E    E K
Sbjct: 1331 AEPKSAEPKSAEPKPAEPKSAEPKPAEQKSAEPK 1364




 Score = 31.2 bits (69), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 59/100 (59%), Positives = 60/100 (60%), Gaps = 23/100 (23%)

Query: 43  KPAENKPQEEPKPA-PKP-EPKP-EPKP-EPKPA-PKP-EPKP-EPKP------EPKP-- 87
           KPAE KP  EPKPA PK  EPKP EPKP EPK A PKP EPK  EPKP      EPKP  
Sbjct: 774 KPAEPKPA-EPKPAEPKSAEPKPAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAE 832

Query: 88  ----EPKP-EPK-AEPKP-EPKKEEAEEEEDIEEEEKFEG 120
               EPKP EPK AEPKP EPK  E +  E    E K  G
Sbjct: 833 PKSAEPKPTEPKSAEPKPAEPKPAEPKSAEPKPTEPKSAG 872




 Score = 30.8 bits (68), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 58/97 (59%), Positives = 61/97 (62%), Gaps = 23/97 (23%)

Query: 32  VETKPVVLTTSKP--AENKPQE----EPKPA------PKP-EPK-PEPKP-EPKPA-PKP 75
            E KP    +++P  AE KP E    EPKPA      PKP EPK  EPKP EPK A PKP
Sbjct: 896 AEPKPAEPKSAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKP 955

Query: 76  -EPKP-EPKP-EPKP-EPKP-EPK-AEPKP-EPKKEE 105
            EPK  EPKP EPKP EPKP EPK AEPKP EPK  E
Sbjct: 956 AEPKSAEPKPAEPKPAEPKPAEPKSAEPKPAEPKSAE 992




 Score = 30.4 bits (67), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 56/108 (51%), Positives = 58/108 (53%), Gaps = 41/108 (37%)

Query: 32   VETKPVVLTT--SKPAENKPQEEPKPAPKPEPKP-EPKP-EPKPA-PKP------EPKP- 79
             E+KP    +  SKPAE K   EPKPA   EPKP EPKP EPKPA PKP      EPKP 
Sbjct: 1106 AESKPAEQKSAESKPAEPK-SAEPKPA---EPKPAEPKPAEPKPAGPKPAEQKSAEPKPT 1161

Query: 80   --------------------EPKP-EPKPE-PKP-EPK-AEPKP-EPK 102
                                EPKP EPKP  PKP EPK AEPKP EPK
Sbjct: 1162 EPKSAGPKPAEQKSAESKPAEPKPAEPKPAGPKPAEPKPAEPKPAEPK 1209




 Score = 30.4 bits (67), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 54/96 (56%), Positives = 57/96 (59%), Gaps = 29/96 (30%)

Query: 32   VETKPVVLTTS--KPAENKPQEEPKPA-PKPE-PKP------EPKP-EPKPA-PKP---- 75
             E+KP    ++  KPAE KP E PKPA PKP  PKP      EPKP EPK A PKP    
Sbjct: 1116 AESKPAEPKSAEPKPAEPKPAE-PKPAEPKPAGPKPAEQKSAEPKPTEPKSAGPKPAEQK 1174

Query: 76   -------EPKP-EPKPE-PKP-EPKP-EPK-AEPKP 99
                   EPKP EPKP  PKP EPKP EPK AEPKP
Sbjct: 1175 SAESKPAEPKPAEPKPAGPKPAEPKPAEPKPAEPKP 1210




 Score = 30.4 bits (67), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 51/73 (69%), Positives = 51/73 (69%), Gaps = 14/73 (19%)

Query: 43   KPAENKPQEEPKPAPKPEPK-PEPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EPKP-EPK 94
            KPAE K   EPKPA   EPK  EPKP EPKPA PKP EPK  EPKP EPK  EPKP EPK
Sbjct: 944  KPAEPK-SAEPKPA---EPKSAEPKPAEPKPAEPKPAEPKSAEPKPAEPKSAEPKPAEPK 999

Query: 95   -AEPKP-EPKKEE 105
             AEPKP EPK  E
Sbjct: 1000 SAEPKPAEPKSAE 1012




 Score = 30.0 bits (66), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 49/76 (64%), Positives = 49/76 (64%), Gaps = 20/76 (26%)

Query: 43   KPAENKPQEEPKPAPKPEPKP-EPKP-EPKPAPKPEPKP-EPK-PEPKP------EPKP- 91
            KPAE K   EPKPA   EPKP EPKP EPK A   EPKP EPK  EPKP      EPKP 
Sbjct: 954  KPAEPK-SAEPKPA---EPKPAEPKPAEPKSA---EPKPAEPKSAEPKPAEPKSAEPKPA 1006

Query: 92   EPK-AEPKP-EPKKEE 105
            EPK AEPKP EPK  E
Sbjct: 1007 EPKSAEPKPAEPKSAE 1022




 Score = 30.0 bits (66), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 56/91 (61%), Positives = 56/91 (61%), Gaps = 28/91 (30%)

Query: 42   SKPAENKPQEEPKPA-PKP-EPKP------EPKP-EPKPA-PKP-EPKP----------- 79
            SKPAE KP E PKPA PKP EPKP      EPK  EPKPA PK  EPKP           
Sbjct: 1308 SKPAEPKPAE-PKPAEPKPAEPKPAEPKSAEPKSAEPKPAEPKSAEPKPAEQKSAEPKTA 1366

Query: 80   EPKP-EPK-PEPKP-EPK-AEPKP-EPKKEE 105
            EPKP EPK  EPKP EPK AEPKP EPK  E
Sbjct: 1367 EPKPAEPKSAEPKPAEPKPAEPKPAEPKSAE 1397




 Score = 30.0 bits (66), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 57/104 (54%), Positives = 57/104 (54%), Gaps = 41/104 (39%)

Query: 43  KPAENKPQE----EPKPA------PKP------EPKP------EPKP------EPKPA-P 73
           KPAE KP E    EPKPA      PKP      EPKP      EPKP      EPKPA P
Sbjct: 794 KPAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPTEPKSAEPKPAEP 853

Query: 74  KP------EPKP-EPKPE-PKP-EPKP-EPK-AEPKP-EPKKEE 105
           KP      EPKP EPK   PKP EPKP EPK AEPKP EPK  E
Sbjct: 854 KPAEPKSAEPKPTEPKSAGPKPAEPKPAEPKSAEPKPAEPKSAE 897




 Score = 29.6 bits (65), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 52/77 (67%), Positives = 52/77 (67%), Gaps = 17/77 (22%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPKP-EPKP-EPKPAPKPEPKP-EPKP-EPKP-EPKP 91
            KPAE KP E    EPKPA PK  EPKP EPK  EPKPA   EPK  EPKP EPK  EPKP
Sbjct: 969  KPAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPA---EPKSAEPKPAEPKSAEPKP 1025

Query: 92   -EPK-AEPKP-EPKKEE 105
             EPK AEPKP EPK  E
Sbjct: 1026 AEPKSAEPKPAEPKSAE 1042




 Score = 29.3 bits (64), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 53/87 (60%), Positives = 53/87 (60%), Gaps = 27/87 (31%)

Query: 43   KPAENKPQE----EPKPA-PKP-EPK-PEPKP-----------EPKPAPKPEPKP-EPKP 83
            KPAE KP E    EPK A PKP EPK  EPKP           EPKPA   EPK  EPKP
Sbjct: 1324 KPAEPKPAEPKSAEPKSAEPKPAEPKSAEPKPAEQKSAEPKTAEPKPA---EPKSAEPKP 1380

Query: 84   -EPKP-EPKP-EPK-AEPKP-EPKKEE 105
             EPKP EPKP EPK AEPKP EPK  E
Sbjct: 1381 AEPKPAEPKPAEPKSAEPKPAEPKSAE 1407




 Score = 29.3 bits (64), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 51/73 (69%), Positives = 51/73 (69%), Gaps = 14/73 (19%)

Query: 43   KPAENKPQEEPKPAPKPEPK-PEPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EPKP-EPK 94
            KPAE KP E PKPA   EPK  EPKP EPK A PKP EPK  EPKP EPK  EPKP EPK
Sbjct: 964  KPAEPKPAE-PKPA---EPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPK 1019

Query: 95   -AEPKP-EPKKEE 105
             AEPKP EPK  E
Sbjct: 1020 SAEPKPAEPKSAE 1032




 Score = 28.5 bits (62), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 50/85 (58%), Positives = 55/85 (64%), Gaps = 14/85 (16%)

Query: 32  VETKPVVLTTSKPAENKPQE-EPKPA-PKP-EPKP-EPKP-EPKPA-PKP-EPKP-EPK- 82
            E KP    +++P   +P+  EPKPA PKP EPK  EPKP EPK A PKP EPKP EPK 
Sbjct: 826 AEPKPAEPKSAEPKPTEPKSAEPKPAEPKPAEPKSAEPKPTEPKSAGPKPAEPKPAEPKS 885

Query: 83  PEPKP-EPKPEPKAEPKP-EPKKEE 105
            EPKP EPK    AEPKP EPK  E
Sbjct: 886 AEPKPAEPK---SAEPKPAEPKSAE 907




 Score = 27.7 bits (60), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 49/75 (65%), Positives = 49/75 (65%), Gaps = 18/75 (24%)

Query: 43  KPAENKPQE----EPKPAPKPEPKP-EPKP-EPKPAPKPEPKP-EPKP-EPK-PEPKP-E 92
           KPAE KP E    EPKPA   EPK  EPKP EPK A   EPK  EPKP EPK  EPKP E
Sbjct: 874 KPAEPKPAEPKSAEPKPA---EPKSAEPKPAEPKSA---EPKSAEPKPAEPKSAEPKPAE 927

Query: 93  PK-AEPKP-EPKKEE 105
           PK AEPKP EPK  E
Sbjct: 928 PKSAEPKPAEPKSAE 942




 Score = 27.7 bits (60), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 54/94 (57%), Positives = 57/94 (60%), Gaps = 24/94 (25%)

Query: 26   IEIKPKVETKPVVLTTSKP--AENKPQE----EPKPA------PK-PEPKP-EPK-PEPK 70
             E KP  E KP    +++P  AE KP E    EPKPA      PK  EPKP EPK  EPK
Sbjct: 1321 AEPKP-AEPKPAEPKSAEPKSAEPKPAEPKSAEPKPAEQKSAEPKTAEPKPAEPKSAEPK 1379

Query: 71   PAPKPEPKP-EPKP-EPKP-EPKP-EPK-AEPKP 99
            PA   EPKP EPKP EPK  EPKP EPK AEPKP
Sbjct: 1380 PA---EPKPAEPKPAEPKSAEPKPAEPKSAEPKP 1410



>EAY09254.1 on XP_648254  SREHP  (Adhesin)  [Entamoeba histolytica]
          Length = 233

 Score = 34.3 bits (77), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 9/84 (10%)

Query: 25  KIEIKPKVET--KPVVLTTSKPAENKPQ--EEPKPAPKPEP----KPEPKPEPKPAPKPE 76
           K + KP+  +  KP   ++ KP +NKP+     KP  KPE     KP+ KPE   + KP+
Sbjct: 86  KPDNKPEASSSDKPEASSSDKP-DNKPEASSSDKPDNKPEASSSDKPDNKPEASSSDKPD 144

Query: 77  PKPEPKPEPKPEPKPEPKAEPKPE 100
            KPE     KP+ KPE  +  KPE
Sbjct: 145 NKPEASSSDKPDNKPEASSTNKPE 168




 Score = 31.2 bits (69), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 36/72 (50%), Gaps = 3/72 (4%)

Query: 31  KVETKPVVLTTSKPAENKPQ--EEPKPAPKPEPKPEPKPEPKPAPKPEPKPEPKPEPKPE 88
           K + KP   ++ KP +NKP+     KP  KPE     KP+ KP      KP+ KPE    
Sbjct: 106 KPDNKPEASSSDKP-DNKPEASSSDKPDNKPEASSSDKPDNKPEASSSDKPDNKPEASST 164

Query: 89  PKPEPKAEPKPE 100
            KPE  +  KPE
Sbjct: 165 NKPEASSTNKPE 176




 Score = 30.0 bits (66), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 29/56 (51%)

Query: 54  KPAPKPEPKPEPKPEPKPAPKPEPKPEPKPEPKPEPKPEPKAEPKPEPKKEEAEEE 109
           KP  KPE     KPE   + KP+ KPE     KP+ KPE  +  KP+ K E +  +
Sbjct: 86  KPDNKPEASSSDKPEASSSDKPDNKPEASSSDKPDNKPEASSSDKPDNKPEASSSD 141




 Score = 30.0 bits (66), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 2/66 (3%)

Query: 46  ENKPQ--EEPKPAPKPEPKPEPKPEPKPAPKPEPKPEPKPEPKPEPKPEPKAEPKPEPKK 103
           +NKP+     KP      KP+ KPE   + KP+ KPE     KP+ KPE  +  KP+ K 
Sbjct: 88  DNKPEASSSDKPEASSSDKPDNKPEASSSDKPDNKPEASSSDKPDNKPEASSSDKPDNKP 147

Query: 104 EEAEEE 109
           E +  +
Sbjct: 148 EASSSD 153



>EAY09254.1 on AAC37226  SBP1  (Others)  [Babesia bovis]
          Length = 596

 Score = 32.7 bits (73), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 28/54 (51%), Positives = 30/54 (55%), Gaps = 3/54 (5%)

Query: 43  KPAENKPQEEP--KPAPKPEPKPEPKPEPKPAPKPEPKPEPKPEPKPEPKPEPK 94
           +PAE KP E+P  KPA KP   P   P  KPA KP  KP  KP  KP  KP  K
Sbjct: 315 EPAE-KPAEKPAEKPAEKPAETPAETPAEKPAEKPAEKPAEKPAEKPAEKPAEK 367




 Score = 32.0 bits (71), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 28/57 (49%), Positives = 28/57 (49%), Gaps = 2/57 (3%)

Query: 51  EEP--KPAPKPEPKPEPKPEPKPAPKPEPKPEPKPEPKPEPKPEPKAEPKPEPKKEE 105
           EEP  KPA KP  KP  KP   PA  P  KP  KP  KP  KP  K   KP  K  E
Sbjct: 314 EEPAEKPAEKPAEKPAEKPAETPAETPAEKPAEKPAEKPAEKPAEKPAEKPAEKPAE 370




 Score = 30.4 bits (67), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 29/62 (46%), Gaps = 5/62 (8%)

Query: 35  KPVVLTTSKPAEN---KPQEEP--KPAPKPEPKPEPKPEPKPAPKPEPKPEPKPEPKPEP 89
           KP      KPAE     P E+P  KPA KP  KP  KP  KPA KP   P   P   P  
Sbjct: 323 KPAEKPAEKPAETPAETPAEKPAEKPAEKPAEKPAEKPAEKPAEKPAETPAETPAETPAE 382

Query: 90  KP 91
           KP
Sbjct: 383 KP 384




 Score = 28.5 bits (62), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 26/51 (50%), Gaps = 3/51 (5%)

Query: 43  KPAENKPQEEP--KPAPKPEPKPEPKPEPKPAPKPEPKPEPKPEPKPEPKP 91
           KPAE KP E+P  KPA KP  KP  KP   PA  P   P  KP   P   P
Sbjct: 343 KPAE-KPAEKPAEKPAEKPAEKPAEKPAETPAETPAETPAEKPAETPAETP 392



>EAY09254.1 on XP_001349740  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3346

 Score = 32.0 bits (71), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 16/41 (39%), Positives = 21/41 (51%)

Query: 41   TSKPAENKPQEEPKPAPKPEPKPEPKPEPKPAPKPEPKPEP 81
            + +P EN    +PKP   PE  PE  P  KP  +  PK +P
Sbjct: 2798 SGEPRENSDSSDPKPDQNPEANPEQTPILKPEEEAPPKSKP 2838




 Score = 32.0 bits (71), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 2/65 (3%)

Query: 39   LTTSKPAENKPQEEPKPAPKP-EPKPEPKPEPKPA-PKPEPKPEPKPEPKPEPKPEPKAE 96
            + T++  E    E   P+  P E   EP+     + PKP+  PE  PE  P  KPE +A 
Sbjct: 2774 VDTTQDEEEPASEGGGPSGSPTEESGEPRENSDSSDPKPDQNPEANPEQTPILKPEEEAP 2833

Query: 97   PKPEP 101
            PK +P
Sbjct: 2834 PKSKP 2838



>EAY09254.1 on XP_808957   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1446

 Score = 30.8 bits (68), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 54/85 (63%), Positives = 54/85 (63%), Gaps = 14/85 (16%)

Query: 43   KPAENKPQEEPKPAPKPEPKP-EPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EPKP-EPK 94
            KPAE K   EPKPA   EPK  EPKP EPK A PKP EPK  EPKP EPK  EPKP EPK
Sbjct: 953  KPAEPK-SAEPKPA---EPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPK 1008

Query: 95   -AEPKP-EPKKEEAEEEEDIEEEEK 117
             AEPKP EPK  E E  E    E K
Sbjct: 1009 SAEPKPAEPKSAEPEPAEPKSAEPK 1033




 Score = 29.3 bits (64), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 51/87 (58%), Positives = 52/87 (59%), Gaps = 18/87 (20%)

Query: 43  KPAENKPQEEPKPAPKPEPKP-EPKP-EPKPAPKPEPKPEPKP-EPKP------EPKP-E 92
           KPAE K   EPKPA   EPK  EPKP EPK A +PEP  EPK  EPKP      EPKP E
Sbjct: 803 KPAEPK-SAEPKPA---EPKSAEPKPAEPKSA-EPEPA-EPKSAEPKPAEPKSAEPKPAE 856

Query: 93  PK-AEPKP-EPKKEEAEEEEDIEEEEK 117
           PK AEPKP EPK  E E  E    E K
Sbjct: 857 PKSAEPKPAEPKSAEPEPAEPKSAEPK 883




 Score = 28.9 bits (63), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 53/85 (62%), Positives = 54/85 (63%), Gaps = 14/85 (16%)

Query: 43  KPAENKPQEEPKPAPKPEPK-PEPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EPKP-EPK 94
           KPAE K   EPKPA   EPK  EPKP EPK A PKP EPK  EPKP EPK  EPKP EPK
Sbjct: 903 KPAEPK-SAEPKPA---EPKSAEPKPAEPKSAGPKPAEPKSAEPKPAEPKSAEPKPAEPK 958

Query: 95  -AEPKP-EPKKEEAEEEEDIEEEEK 117
            AEPKP EPK  E +  E    E K
Sbjct: 959 SAEPKPAEPKSAEPKPAEPKSAEPK 983




 Score = 28.1 bits (61), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 56/93 (60%), Positives = 57/93 (61%), Gaps = 18/93 (19%)

Query: 42  SKPAENKPQEEPKPA------PKP-EPK-PEPKP-EPKPA-PKP-EPKPE-PKP-EPKP- 87
           SKPAE K   EP+PA      PKP EPK  EPKP EPK A PKP EPK   PKP EPK  
Sbjct: 752 SKPAEPK-SAEPEPAEPKSAGPKPAEPKSAEPKPAEPKSAEPKPAEPKSAGPKPAEPKSA 810

Query: 88  EPKP-EPK-AEPKP-EPKKEEAEEEEDIEEEEK 117
           EPKP EPK AEPKP EPK  E E  E    E K
Sbjct: 811 EPKPAEPKSAEPKPAEPKSAEPEPAEPKSAEPK 843




 Score = 27.7 bits (60), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 52/86 (60%), Positives = 53/86 (61%), Gaps = 16/86 (18%)

Query: 43  KPAENKPQEEPKPA-PKP-EPKP-EPKP-EPKPAPKPEPKP-EPKP-EPK---PEPKPEP 93
           KPAE K   EP+PA PK  EPKP EPK  EPKPA   EPK  EPKP EPK   PEP  EP
Sbjct: 823 KPAEPK-SAEPEPAEPKSAEPKPAEPKSAEPKPA---EPKSAEPKPAEPKSAEPEPA-EP 877

Query: 94  K-AEPKP-EPKKEEAEEEEDIEEEEK 117
           K AEPKP EPK  E E  E    E K
Sbjct: 878 KSAEPKPAEPKSAEPEPAEPKSAEPK 903




 Score = 27.3 bits (59), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 52/85 (61%), Positives = 54/85 (63%), Gaps = 14/85 (16%)

Query: 43  KPAENKPQEEPKPAPKPEPK-PEPKP-EPKPA-PKP-EPKP-EPKP-EPKP-EPKP-EPK 94
           KPAE K   EPKPA   EPK  EPKP EPK A PKP EPK  EPKP EPK  EPKP EPK
Sbjct: 773 KPAEPK-SAEPKPA---EPKSAEPKPAEPKSAGPKPAEPKSAEPKPAEPKSAEPKPAEPK 828

Query: 95  -AEPKP-EPKKEEAEEEEDIEEEEK 117
            AEP+P EPK  E +  E    E K
Sbjct: 829 SAEPEPAEPKSAEPKPAEPKSAEPK 853




 Score = 25.8 bits (55), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 50/78 (64%), Positives = 51/78 (65%), Gaps = 14/78 (17%)

Query: 43   KPAENKPQEEPKPA-PK-PEPKP-EPKP-EPKPAPKPEPKP-EPKP-EPKP-EPKP-EPK 94
            KPAE K   EPKPA PK  EPKP EPK  EP+PA   EPK  EPKP EPK  EPKP EPK
Sbjct: 993  KPAEPK-SAEPKPAEPKSAEPKPAEPKSAEPEPA---EPKSAEPKPAEPKSAEPKPAEPK 1048

Query: 95   -AEPKP-EPKKEEAEEEE 110
             A PKP EPK  E E  E
Sbjct: 1049 SAGPKPAEPKSAEPEPTE 1066



>EAY09254.1 on XP_810140   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 923

 Score = 27.3 bits (59), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 43/108 (39%), Gaps = 22/108 (20%)

Query: 22  NGTKIEIKPKVETKPV--VLTTS---KPAENKPQEEPKP-APKPEPK-PEPKPE------ 68
           N +K+ I P  E KPV     TS    PA  +     +P AP P P  P+P         
Sbjct: 683 NASKVTIPPP-ERKPVPAAAATSPSVGPANERMTTNTQPTAPAPTPAGPQPTTRVTSNGS 741

Query: 69  --------PKPAPKPEPKPEPKPEPKPEPKPEPKAEPKPEPKKEEAEE 108
                     PA     +P+P      EPKP      +P+P + E+EE
Sbjct: 742 SGASGGAPSTPAVSESEEPKPAESESEEPKPAESESEEPKPVESESEE 789



>EAY09254.1 on XP_805038   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 927

 Score = 26.9 bits (58), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 14/70 (20%)

Query: 30  PKVETKPVVLTTSKPAENKPQEEPKPAPKPEPKPEPKPEPKPAPKPEPKPEPKPEPKPEP 89
           P+   +  + T+S P+   P   P PA   EPK E   EPKPA   E +PE +P+P    
Sbjct: 732 PQQTDQTTLNTSSVPSGGAP---PTPA---EPKSE---EPKPA---ESRPE-EPKPAESE 778

Query: 90  KPEPK-AEPK 98
             EPK AEP 
Sbjct: 779 SEEPKPAEPN 788




 Score = 25.8 bits (55), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 21/75 (28%), Positives = 28/75 (37%), Gaps = 3/75 (4%)

Query: 44  PAENKPQEEPKPAPKPEPKPEPKPEPKPAPKPEPKPEPKPEPKPEPKP--EPKAEPKP-E 100
           PA   PQ+  +        P     P PA     +P+P      EPKP      EPKP E
Sbjct: 727 PATAGPQQTDQTTLNTSSVPSGGAPPTPAEPKSEEPKPAESRPEEPKPAESESEEPKPAE 786

Query: 101 PKKEEAEEEEDIEEE 115
           P    +   E   ++
Sbjct: 787 PNAATSSAREGTADQ 801



>EAY09254.1 on XP_001347691  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2182

 Score = 26.6 bits (57), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 15/27 (55%), Positives = 16/27 (59%), Gaps = 3/27 (11%)

Query: 51   EEPKPAPKPEPKPEPKPEPKPAPKPEP 77
            E+PK  PKP   PEPK E K A  P P
Sbjct: 1683 EQPKFCPKP---PEPKAEEKGACDPAP 1706



>EAY09254.1 on ABA06451  MSA-2a2  (Invasion)  [Babesia bovis]
          Length = 287

 Score = 26.2 bits (56), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 12/67 (17%)

Query: 45  AENKPQEEPKPAPKPEPKPEPKPEPKPAPKP-----------EPKPEPKPEPKPEPKPEP 93
           A N  +E  K  P   P P   P+  P  KP           +P+ E  PE +P   P P
Sbjct: 189 AFNTYEELLKKMPSKTPSPTSSPQATPGAKPAAPNTSESAGGQPQQE-TPENRPSQAPSP 247

Query: 94  KAEPKPE 100
           ++ P+ E
Sbjct: 248 QSPPQTE 254



>EAY09254.1 on AAL15423  MSA-2b  (Invasion)  [Babesia bovis]
          Length = 287

 Score = 26.2 bits (56), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 12/67 (17%)

Query: 45  AENKPQEEPKPAPKPEPKPEPKPEPKPAPKP-----------EPKPEPKPEPKPEPKPEP 93
           A N  +E  K  P   P P   P+  P  KP           +P+ E  PE +P   P P
Sbjct: 189 AFNTYEELLKKMPSKTPSPTSSPQATPGAKPAAPNTSESAGGQPQQE-TPENRPSQAPSP 247

Query: 94  KAEPKPE 100
           ++ P+ E
Sbjct: 248 QSPPQTE 254



>EAY09254.1 on XP_815706   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 907

 Score = 25.8 bits (55), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 39/104 (37%), Gaps = 12/104 (11%)

Query: 22  NGTKIEIKPKVETKPV---VLTTSK-------PAENKPQEEPKPAPK-PEPKPEPKPEPK 70
           N +K+ I P  E KPV     T+S         A+N     P PA   P+P  +      
Sbjct: 686 NASKVTIPPP-ERKPVPAAAATSSSVEPLTTPAAKNTQPTVPSPATAGPQPTDQKSLSAS 744

Query: 71  PAPKPEPKPEPKPEPKPEPKPEPKAEPKPEPKKEEAEEEEDIEE 114
             P      EP      EP+P      +PEP +   EE E   E
Sbjct: 745 SVPSGGALSEPAASRPEEPEPAESRPEEPEPAESRPEEPEPARE 788



>EAY09254.1 on XP_815707   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 907

 Score = 25.8 bits (55), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 39/104 (37%), Gaps = 12/104 (11%)

Query: 22  NGTKIEIKPKVETKPV---VLTTSK-------PAENKPQEEPKPAPK-PEPKPEPKPEPK 70
           N +K+ I P  E KPV     T+S         A+N     P PA   P+P  +      
Sbjct: 686 NASKVTIPPP-ERKPVPAAAATSSSVEPLTTPAAKNTQPTVPSPATAGPQPTDQKSLSAS 744

Query: 71  PAPKPEPKPEPKPEPKPEPKPEPKAEPKPEPKKEEAEEEEDIEE 114
             P      EP      EP+P      +PEP +   EE E   E
Sbjct: 745 SVPSGGALSEPAASRPEEPEPAESRPEEPEPAESRPEEPEPARE 788



>EAY09254.1 on XP_001349032  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2267

 Score = 25.8 bits (55), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)

Query: 75   PEPKPEPKPEPKPEPKPEPKAEPKPEPK 102
            PEP P+ K  PKP  +P+ K  PK +P+
Sbjct: 1729 PEP-PQDKALPKPAAQPKDKKRPKRQPQ 1755



>EAY09254.1 on XP_811521   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 830

 Score = 25.8 bits (55), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 40/102 (39%), Gaps = 10/102 (9%)

Query: 4   PLKIEKPKTAGGFTLS---LGNGTKIEIKPK------VETKPVVLTTSKPAENKPQEEPK 54
           PL  E P    GF      LG+  + E  P+      +  KP V  T+    N+P    +
Sbjct: 665 PLTGETPLELFGFCFGACDLGDDGEEEASPEKPSPKGIGKKPRVTVTNVFLYNRPLNSTE 724

Query: 55  PAPKPEPKPEPKPEPKPAPKPEPKP-EPKPEPKPEPKPEPKA 95
                +  P PK  P+P  K  PKP  P     P P+  P A
Sbjct: 725 MTAIKDRIPVPKRAPEPQVKIAPKPVAPALPAVPGPREVPAA 766




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09255.1 Myh10 protein, putative [Trichomonas
vaginalis G3]
         (202 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001611365  variant erythrocyte surface antigen-1, alpha subun...    29   0.25 
XP_001609751  variant erythrocyte surface antigen-1, alpha subun...    27   1.1  
XP_001610497  variant erythrocyte surface antigen-1, alpha subun...    26   2.0  
XP_001609667  variant erythrocyte surface antigen-1, alpha subun...    25   4.2  
XP_001610714  variant erythrocyte surface antigen-1, alpha subun...    25   4.4  
XP_001350415  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   6.9  
XP_001610567  variant erythrocyte surface antigen-1, alpha subun...    24   7.4  

>EAY09255.1 on XP_001611365  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1335

 Score = 28.9 bits (63), Expect = 0.25,   Method: Composition-based stats.
 Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 16/101 (15%)

Query: 40  KQYKDKVFSARKKLK----EVQFEADLSETQIVYKKPIRQHQFNVFDREIKIENSKTTAA 95
           + YKD +  A++ LK    +VQ    LS  Q     PI  H++N+F            A 
Sbjct: 481 QAYKDTLDYAKEVLKKVAPDVQGTKTLSFLQTGRTAPITVHEYNLF------------AH 528

Query: 96  LQAAQQDYELTSKSLQDEIKSLLNQAKKKKKTLDTLISNIE 136
            QA  Q   L    +Q  I S  +    K+  + +L +N E
Sbjct: 529 FQAVTQYCPLVLIGIQGGIHSSKSTDSTKEPPIHSLYANTE 569



>EAY09255.1 on XP_001609751  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1298

 Score = 26.6 bits (57), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 4/46 (8%)

Query: 40  KQYKDKVFSARKKLK----EVQFEADLSETQIVYKKPIRQHQFNVF 81
           + YKD +  A+++LK    +V  +  LS  Q     PI  H+FN+F
Sbjct: 446 QAYKDMLDYAKERLKKEAPDVGDKKQLSFLQTGRNAPITVHEFNLF 491



>EAY09255.1 on XP_001610497  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1315

 Score = 25.8 bits (55), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 10/52 (19%)

Query: 40  KQYKDKVFSARKKLKEV-----QFEADLSETQIVY-----KKPIRQHQFNVF 81
           + YKD +  A+K+LKEV       ++   ETQ+ +     K PI   ++N+F
Sbjct: 477 QAYKDMLDYAKKRLKEVLKKPGDNDSTNGETQLKFYQTGLKHPITVDEYNLF 528



>EAY09255.1 on XP_001609667  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1303

 Score = 25.0 bits (53), Expect = 4.2,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 69/158 (43%), Gaps = 13/158 (8%)

Query: 7   VSELIAKIGEMQAEKIRLEGEYESMKLQFDRDIKQYKDKVFSARKKLKEVQFE----ADL 62
           + +++ KIGE+    ++L    E+++ +   +IK  + K+  A+K L+E + E     DL
Sbjct: 661 LKDVLEKIGEVV---VQLGNAQEALERRKGEEIKGVQKKLQEAKKGLEEARKELETGEDL 717

Query: 63  SETQIVYKKPIRQHQFNVFDREI-KIENSKTTAA----LQAAQQDYELTSKSLQDEIKSL 117
            E  +   K       N     +  + N   TA     +  A  D++    S +D+I  +
Sbjct: 718 DEDDLKEAKEALGELTNGGGGALHTLANGSNTAGSLHQVATAGADWQKEYSSAKDKISEV 777

Query: 118 LNQAKKKKKTLDTLISNIEN-LKQSNKSLKSDIKQLRS 154
           +++ ++    L T +  + + L          I+QL S
Sbjct: 778 IHKIQEVLTALQTEVPQVSSHLNGHKDEFTKAIEQLIS 815



>EAY09255.1 on XP_001610714  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1231

 Score = 24.6 bits (52), Expect = 4.4,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 3/44 (6%)

Query: 40  KQYKDKVFSARKKLKEV---QFEADLSETQIVYKKPIRQHQFNV 80
           + YKD +  A+K+L+EV     E D  + Q+ + +  R H   V
Sbjct: 412 QAYKDTLHYAKKRLEEVLKKPDECDTEQQQLKFYQDKRPHPITV 455



>EAY09255.1 on XP_001350415  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3056

 Score = 24.3 bits (51), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 81/202 (40%), Gaps = 41/202 (20%)

Query: 17   MQAEKIRLEGEYESMKLQFDRDIKQYK----DKVFSARKKLKEVQFEAD----------- 61
            M+  ++ LE   E +K + D  IK YK    D+ F  + K+K      D           
Sbjct: 1953 MKCTEVYLEHVEEQLK-EIDNAIKDYKLYPLDRCFDDKSKMKVCDLIGDAIGCKHKTKLD 2011

Query: 62   -LSETQIV-----YKK------PIRQHQFNVFDREIKIENSKTTAALQAAQQDYELTSKS 109
             L E   V     Y K      P R+ Q   F R ++       A L+  ++  E   K 
Sbjct: 2012 ELDEWNDVDMRDPYNKYKGVLIPPRRRQL-CFSRIVR-----GPANLRNLKEFKEEILKG 2065

Query: 110  LQDEIKSL---LNQAKKKKKTLDTLISNIEN----LKQSNKSLKSDIKQLRSELDRVQAD 162
             Q E K L    N+ K K+K L+ + ++  +    +K S+       K ++ +LDR+   
Sbjct: 2066 AQSEGKFLGNYYNEDKDKEKALEAMKNSFYDYEYIIKGSDMLTNIQFKDIKRKLDRLLEK 2125

Query: 163  SHQKTDQISKYHEQNKKLTARA 184
                T+++  + E NKK    A
Sbjct: 2126 ETNNTEKVDDWWETNKKSIWNA 2147



>EAY09255.1 on XP_001610567  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1315

 Score = 24.3 bits (51), Expect = 7.4,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 13/85 (15%)

Query: 33  LQFDRDIKQYKDKVFSARKKLK-EVQFEADLSETQIVYKKPIRQHQFNVFDREIKIENSK 91
           L + +  KQ  D    + KK+  +V  +  LS  Q   K PI  H++N+F          
Sbjct: 493 LPYSQAYKQLLDHSKESLKKVAPDVGDKKQLSFLQTGLKHPITVHEYNLF---------- 542

Query: 92  TTAALQAAQQDYELTSKSLQDEIKS 116
             A  QA  Q   L    +Q  +KS
Sbjct: 543 --AHFQAVTQYCPLVLIGIQGGLKS 565




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09257.1 ribosomal protein S27a, putative [Trichomonas
vaginalis G3]
         (134 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ABA06443  MSA-2a/b  (Invasion)  [Babesia bovis]                        27   0.24 
ABA06447  MSA-2a/b  (Invasion)  [Babesia bovis]                        27   0.24 
XP_001609162  variant erythrocyte surface antigen-1, beta subuni...    27   0.27 
XP_001352170  MSP1  (Invasion)  [Plasmodium falciparum]                27   0.44 
XP_001608665  variant erythrocyte surface antigen-1, alpha subun...    24   3.7  
XP_654447  Igl1  (Adhesin)  [Entamoeba histolytica]                    23   6.4  
ABA06448  MSA-2a/b T-1  (Invasion)  [Babesia bovis]                    23   7.1  
XP_001352240  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   8.7  

>EAY09257.1 on ABA06443  MSA-2a/b  (Invasion)  [Babesia bovis]
          Length = 270

 Score = 27.3 bits (59), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 3/47 (6%)

Query: 6   RTLAGKFLTLEVPSGLSLEELKAFTGLELA---GAVAENAVLEEFEV 49
           R L GKF  + +PS +SL+ L AF  +      G   E ++ +++E+
Sbjct: 54  RYLEGKFKEVNMPSDISLDALSAFVEILDVFGKGVPFETSLFDDYEL 100



>EAY09257.1 on ABA06447  MSA-2a/b  (Invasion)  [Babesia bovis]
          Length = 270

 Score = 27.3 bits (59), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 3/47 (6%)

Query: 6   RTLAGKFLTLEVPSGLSLEELKAFTGLELA---GAVAENAVLEEFEV 49
           R L GKF  + +PS +SL+ L AF  +      G   E ++ +++E+
Sbjct: 54  RYLEGKFKEVNMPSDISLDALSAFVEILDVFGKGVPFETSLFDDYEL 100



>EAY09257.1 on XP_001609162  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 1166

 Score = 27.3 bits (59), Expect = 0.27,   Method: Composition-based stats.
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 4/49 (8%)

Query: 73  RKKEKLKILKLFKIGKDGSVEAQRKECPHCKGCFLAKHK----DGRQYC 117
           + KE+   L +  IG DG VEA +K   +C G      K    DG+  C
Sbjct: 852 KGKEEESKLYMLSIGSDGVVEALKKYGENCSGGTAGNLKCLYSDGKNNC 900



>EAY09257.1 on XP_001352170  MSP1  (Invasion)  [Plasmodium falciparum]
          Length = 1720

 Score = 26.9 bits (58), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 3/33 (9%)

Query: 96   RKECPHCKGCFLAKHKDGRQYCGNCHYTVDKEG 128
            +K+CP   GCF  +H D R+ C  C     +EG
Sbjct: 1615 KKQCPENSGCF--RHLDEREECK-CLLNYKQEG 1644



>EAY09257.1 on XP_001608665  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1326

 Score = 24.3 bits (51), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 12/26 (46%), Positives = 12/26 (46%), Gaps = 4/26 (15%)

Query: 100 PHCKGCFLAKHKDGRQ----YCGNCH 121
           P C GC     K GRQ    YC  CH
Sbjct: 868 PKCPGCTKHSEKCGRQPQSKYCDKCH 893



>EAY09257.1 on XP_654447  Igl1  (Adhesin)  [Entamoeba histolytica]
          Length = 1101

 Score = 23.5 bits (49), Expect = 6.4,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 2/23 (8%)

Query: 102 CKGCFLAKH--KDGRQYCGNCHY 122
           C  C +  H  KDG+  CG+ HY
Sbjct: 525 CTQCPVGSHVGKDGKCSCGDAHY 547



>EAY09257.1 on ABA06448  MSA-2a/b T-1  (Invasion)  [Babesia bovis]
          Length = 284

 Score = 23.1 bits (48), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 8  LAGKFLTLEVPSGLSLEELKAFTGL 32
          L GKF  +++PS  SL+ L AF  +
Sbjct: 56 LEGKFKEVDMPSENSLDALSAFVQI 80



>EAY09257.1 on XP_001352240  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 1315

 Score = 23.1 bits (48), Expect = 8.7,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 17/37 (45%)

Query: 98  ECPHCKGCFLAKHKDGRQYCGNCHYTVDKEGKQIKSN 134
           E   CK   L K+ D   +CGN ++  D      +SN
Sbjct: 417 ENNECKVESLGKYLDKTSHCGNYNFNYDNTPGSNRSN 453




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09267.1 hypothetical protein TVAG_133250 [Trichomonas
vaginalis G3]
         (221 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09272.1 hypothetical protein TVAG_133300 [Trichomonas
vaginalis G3]
         (565 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_965997  PfEMP1  (Establishment)  [Plasmodium falciparum]            28   1.8  

>EAY09272.1 on XP_965997  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2879

 Score = 28.1 bits (61), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 3/47 (6%)

Query: 60   SETKYFLG---IEFIKKVNINTDHVVILSDSLFYASRNIESVTFTNN 103
            S+ K ++G   +EF+KKV  N    +  +D   Y   N +++TFT N
Sbjct: 2007 SDGKAYVGTHVVEFLKKVEKNKCSDLNSADKYLYKGSNCKNLTFTEN 2053




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09277.1 hypothetical protein TVAG_133350 [Trichomonas
vaginalis G3]
         (73 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_966305  PfEMP1  (Establishment)  [Plasmodium falciparum]            23   1.6  
XP_001350413  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   1.6  
XP_001351318  PfEMP1  (Establishment)  [Plasmodium falciparum]         22   4.9  
XP_001349735  PfEMP1  (Establishment)  [Plasmodium falciparum]         22   5.3  
XP_001352240  PfEMP1  (Establishment)  [Plasmodium falciparum]         22   5.4  
XP_965999  PfEMP1  (Establishment)  [Plasmodium falciparum]            22   5.7  
XP_001350935  PfEMP1  (Establishment)  [Plasmodium falciparum]         22   6.2  

>EAY09277.1 on XP_966305  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3954

 Score = 23.5 bits (49), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 8/16 (50%), Positives = 13/16 (81%)

Query: 2    AIAYVYIKAKTQEPSD 17
            +IA++++K KTQ P D
Sbjct: 3455 SIAFLFLKKKTQAPVD 3470



>EAY09277.1 on XP_001350413  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2860

 Score = 23.5 bits (49), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 8/16 (50%), Positives = 13/16 (81%)

Query: 2    AIAYVYIKAKTQEPSD 17
            +IA++++K KTQ P D
Sbjct: 2449 SIAFLFLKKKTQTPVD 2464



>EAY09277.1 on XP_001351318  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2169

 Score = 21.9 bits (45), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 7/16 (43%), Positives = 13/16 (81%)

Query: 2    AIAYVYIKAKTQEPSD 17
            +IA++++K KT+ P D
Sbjct: 1735 SIAFLFLKKKTKSPVD 1750



>EAY09277.1 on XP_001349735  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 431

 Score = 21.9 bits (45), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 8/19 (42%), Positives = 11/19 (57%)

Query: 47  LSDDIFAQYFQNKEEDNKF 65
           L DD  +QY  N E +N +
Sbjct: 147 LKDDFISQYLPNTEPNNNY 165



>EAY09277.1 on XP_001352240  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 1315

 Score = 21.9 bits (45), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 7/51 (13%)

Query: 20   VLEMSEDEIQSAAEINIEN-PLYMTT----QSLSDDIFAQYFQNKEEDNKF 65
            VLE S+ + Q+  +I  +N P Y  T      L DD  +QY  N E +N +
Sbjct: 1001 VLEPSKRDTQN--DIPSDNTPSYKLTDEEWNQLKDDFISQYLPNTEPNNNY 1049



>EAY09277.1 on XP_965999  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 1325

 Score = 21.9 bits (45), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 7/51 (13%)

Query: 20   VLEMSEDEIQSAAEINIEN-PLYMTT----QSLSDDIFAQYFQNKEEDNKF 65
            VLE S+ + Q+  +I  +N P Y  T      L DD  +QY  N E +N +
Sbjct: 1011 VLEPSKRDTQN--DIPSDNTPSYKLTDEEWNQLKDDFISQYLPNTEPNNNY 1059



>EAY09277.1 on XP_001350935  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2268

 Score = 21.9 bits (45), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 8/16 (50%), Positives = 10/16 (62%)

Query: 2    AIAYVYIKAKTQEPSD 17
            A  Y Y+K KT+ P D
Sbjct: 1818 AFTYFYLKKKTKHPVD 1833




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09280.1 cell surface protein, putative [Trichomonas
vaginalis G3]
         (173 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09284.1 cell surface protein, putative [Trichomonas
vaginalis G3]
         (391 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09302.1 hypothetical protein TVAG_394740 [Trichomonas
vaginalis G3]
         (1424 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_816181   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   3.0  
AAZ38162  RON1  (Invasion)  [Toxoplasma gondii]                        27   6.9  

>EAY09302.1 on XP_816181   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 967

 Score = 28.5 bits (62), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 3/65 (4%)

Query: 852 FDDDEDNELN---NIPKVKRAPRKGPQAPSSRPKMKTDESKTPRRTKKHKNNDQIPQQQN 908
            DDDE   LN   +IPK   A   G   P    K  T E+ TP      +  +Q   +++
Sbjct: 737 LDDDEITALNAKLSIPKASEAKTMGGDTPPEAIKPATLETGTPSSLGGQQQTEQELLKKS 796

Query: 909 KDQNN 913
           KD  +
Sbjct: 797 KDAGS 801



>EAY09302.1 on AAZ38162  RON1  (Invasion)  [Toxoplasma gondii]
          Length = 255

 Score = 26.9 bits (58), Expect = 6.9,   Method: Composition-based stats.
 Identities = 23/87 (26%), Positives = 34/87 (39%), Gaps = 16/87 (18%)

Query: 924 SDESENSSDFDDKNSKIQSKNKSEKSNKNDNKSKSDKT------RKSDNLDKSDKNSEK- 976
           SDE  N S+  D  +  +S +   K +  DNKS S+        R + N   S K+    
Sbjct: 84  SDEQRNDSEAHDSVASSESSDAERKDDPPDNKSTSETPEAKLAGRDASNPPASSKSPTPS 143

Query: 977 ---------TKSPKNSKKNKSKKKKTK 994
                    + +P  S  + SK  K K
Sbjct: 144 PAPTPAVSTSTTPAKSSADTSKDPKNK 170




 Score = 26.9 bits (58), Expect = 7.7,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 49/117 (41%), Gaps = 2/117 (1%)

Query: 878 SSRPKMKTDESKTPRRTKKHKNNDQIPQQQNKDQNNQTETDLTLDLSDESENSSDFDDKN 937
           SSR      E    +  ++  +++Q    +  D    +E+       D  +N S  +   
Sbjct: 63  SSRAAANGSEGGVAQSEQERASDEQRNDSEAHDSVASSESSDAERKDDPPDNKSTSETPE 122

Query: 938 SKIQSKNKSE--KSNKNDNKSKSDKTRKSDNLDKSDKNSEKTKSPKNSKKNKSKKKK 992
           +K+  ++ S    S+K+   S +     S +   +  +++ +K PKN   +  K+K+
Sbjct: 123 AKLAGRDASNPPASSKSPTPSPAPTPAVSTSTTPAKSSADTSKDPKNKLSSARKEKR 179




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09303.1 hypothetical protein TVAG_394750 [Trichomonas
vaginalis G3]
         (109 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609040  variant erythrocyte surface antigen-1, alpha subun...    28   0.066
XP_001610713  variant erythrocyte surface antigen-1, alpha subun...    28   0.087
XP_001610721  variant erythrocyte surface antigen-1, alpha subun...    23   7.1  
AAQ63567  MAHRP1  (Others)  [Plasmodium falciparum]                    22   8.7  
XP_817382   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   9.2  

>EAY09303.1 on XP_001609040  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1335

 Score = 28.5 bits (62), Expect = 0.066,   Method: Composition-based stats.
 Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 19/87 (21%)

Query: 18  DEIKDGLNDMAEDAINGELDVGKSMNDMADNILEGGAEAIVDNAFDKLYDSSDVPSEVNE 77
           D++KDGLN  AE          K        +  GG       A   L DS + P  + +
Sbjct: 708 DQVKDGLNGQAEL---------KEAKGKLGELTNGG-----KGALHILVDSGNTPGSLQQ 753

Query: 78  VVDVVKDEVGDALGNAFVRAKDEIVEA 104
           +VD  ++   D     +  AKD I EA
Sbjct: 754 IVDSGQEWRKD-----YSSAKDRISEA 775



>EAY09303.1 on XP_001610713  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1294

 Score = 28.1 bits (61), Expect = 0.087,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 24/122 (19%)

Query: 9   ASDVMDAAEDEIKDGLNDMAEDAIN--GELDVGKSM--NDMADNILEGGAE-AIVDNAFD 63
           A + ++   +E KDGL D  +DA+   GEL  G  +  + +  N LE  AE    D   +
Sbjct: 689 AKNGLNGKLEEAKDGLKDKLQDAMTKLGELTNGGGILVDLLGSNGLEKAAEKGEYDPGKN 748

Query: 64  KLYDSSDVPSEVNEVVDVVKDEVG------------DALGNAFVRAKDEIVEAC----CR 107
           K+   S+   +V  V++ ++ E+G            + + N   +  D+I + C    C 
Sbjct: 749 KI---SEAIHKVRSVMEEIQKELGVSNSSYLNGSLSEWVANTLHKTIDQIKDICNTPKCS 805

Query: 108 VC 109
            C
Sbjct: 806 AC 807



>EAY09303.1 on XP_001610721  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1331

 Score = 22.7 bits (47), Expect = 7.1,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 3/73 (4%)

Query: 21  KDGLNDMAEDAINGELDVGKSMNDMADNILEGGA-EAIVDNAFD--KLYDSSDVPSEVNE 77
           + GL    +D +NG+ ++ K+   +      GGA + +V N  D   L   S+   E  +
Sbjct: 727 RTGLEAAVKDGLNGQAELTKAKEALEKLTKGGGALDILVKNGNDAGSLQQISNSGQEWEK 786

Query: 78  VVDVVKDEVGDAL 90
                KD + +A+
Sbjct: 787 DYSSAKDRISEAI 799



>EAY09303.1 on AAQ63567  MAHRP1  (Others)  [Plasmodium falciparum]
          Length = 338

 Score = 22.3 bits (46), Expect = 8.7,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 21/41 (51%)

Query: 61  AFDKLYDSSDVPSEVNEVVDVVKDEVGDALGNAFVRAKDEI 101
           AFD   D +D P+++ + V    +++ + + +A     D +
Sbjct: 7   AFDFFTDLADEPTQLQDAVPETTEKLAEVVSDAATNVTDAV 47



>EAY09303.1 on XP_817382   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 836

 Score = 22.3 bits (46), Expect = 9.2,   Method: Composition-based stats.
 Identities = 10/18 (55%), Positives = 11/18 (61%)

Query: 8   IASDVMDAAEDEIKDGLN 25
           + SDV  AAE   KDG N
Sbjct: 102 VGSDVFAAAEAHCKDGTN 119




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09304.1 hypothetical protein TVAG_394760 [Trichomonas
vaginalis G3]
         (385 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_652937  Vps29  (Establishment)  [Entamoeba histolytica]             29   0.24 
XP_001609041  variant erythrocyte surface antigen-1, alpha subun...    26   3.8  
XP_001609666  variant erythrocyte surface antigen-1, alpha subun...    26   3.8  
XP_001611365  variant erythrocyte surface antigen-1, alpha subun...    26   5.0  
XP_804902   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   5.5  

>EAY09304.1 on XP_652937  Vps29  (Establishment)  [Entamoeba histolytica]
          Length = 185

 Score = 29.3 bits (64), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 2/35 (5%)

Query: 295 LSDSDIKKALFLEIN--ELKGYDWSFIDESIKAEK 327
           L D+ +   + LEIN  EL  Y+++ +D S+K E+
Sbjct: 142 LVDNPVPSFMLLEINDSELTIYEYTLVDGSVKCER 176



>EAY09304.1 on XP_001609041  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1318

 Score = 26.2 bits (56), Expect = 3.8,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 8/130 (6%)

Query: 42  ALKTQLESKLEELQNELDAIEEENSEFEANTIDPDTQNFTLTGDFFEQLRILEGQGEIIS 101
           AL+ + +  +E ++ EL+  +EE  E      D   +N  L  +   +L  L G G +  
Sbjct: 707 ALEGKDKGAIEGVKRELEKAKEELVEAVKQVKDA-VENCGLE-EAKNKLEELTGNGGLDK 764

Query: 102 AKLAGIKAGNVDLQAEVQSNVNKTKILRKQNTDLEEKVANLKELLEKRKVDIRQIEENYV 161
           A       G   + A +       + L+K+   +E++   LKE+LEK + D+  I + ++
Sbjct: 765 ANSGEYDPGKNKISAAIDGVCKALEALKKE---MEKQ---LKEVLEKEQSDMDDITKWFI 818

Query: 162 KVTTEEEQLK 171
           +  T  + +K
Sbjct: 819 REKTFYKAVK 828



>EAY09304.1 on XP_001609666  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1269

 Score = 26.2 bits (56), Expect = 3.8,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 12/153 (7%)

Query: 24  VFYDKKINHEKLFLRKNLALKTQLESKLEELQNELDAIEEENSEFEANTIDP-DTQNFTL 82
           V Y + + ++  FLRK  A+K  L  K  E +     + ++   +     DP +    + 
Sbjct: 529 VHYIRALFYQLYFLRKQCAMKVALGGKWRECRYGSGVLGKDVVSWMCLGCDPMEHDRKSR 588

Query: 83  TGDFFEQLRILEGQGEIISAKLAGI--KAGNVDLQAEVQSNVNKTKILRKQNTDLEEKVA 140
             +  + L  +    + ++ KL  +  K G V +Q       N  + L  ++ D+ EKV 
Sbjct: 589 VKELKKILWKVPSGKDTLAEKLKDVLEKIGEVVVQLG-----NAQEALETKDKDVIEKV- 642

Query: 141 NLKELLEKRKVDIRQIEENYVKVTTEEEQLKLD 173
             KE L K K  + +  +N +K   EE + KLD
Sbjct: 643 --KEALRKAKEGL-ETAKNGLKDKLEEAKKKLD 672



>EAY09304.1 on XP_001611365  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1335

 Score = 25.8 bits (55), Expect = 5.0,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 60/150 (40%), Gaps = 16/150 (10%)

Query: 24  VFYDKKINHEKLFLRKNLALKTQLESKLEELQNELDAIEEENSEFEANTIDPDTQNFTLT 83
           V Y + + ++  FLRK  A+K     K  E +   D + +    +      P   + T  
Sbjct: 586 VHYIRALFYQLYFLRKQCAMKVAQGGKWRECRYGKDVVSKGVISWMCLGCSPMEHDRTKR 645

Query: 84  GDFFEQLRILEGQGEII-SAKLAGIKAGNVDLQAEVQSNVNKTKILRKQNTDLEEKVANL 142
            D     ++ E  G+++   KL         L+ E    + K K L     D+  ++ N 
Sbjct: 646 VD-----KVKEELGKVVKKVKL---------LEGEKADGIEKAKALLVAIGDVVVQLGNA 691

Query: 143 KELLEKRKVD-IRQIEENYVKVTTEEEQLK 171
           +E LE +K + I  ++E   +   E E  K
Sbjct: 692 QEALEGKKTEGINAVKEKLTEAKGELEGAK 721



>EAY09304.1 on XP_804902   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1042

 Score = 25.8 bits (55), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 4/34 (11%)

Query: 3   ENSTEEVILNQDEEDELIQMGVFYDKK-INHEKL 35
            N T +V+L  D++DE     VF DKK I+H++ 
Sbjct: 623 PNKTYQVVLRMDDDDEWT---VFVDKKQIDHKRY 653




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09305.1 hypothetical protein TVAG_394770 [Trichomonas
vaginalis G3]
         (296 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_807449   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   6.4  
XP_806132   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   7.1  
XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 25   8.1  

>EAY09305.1 on XP_807449   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 700

 Score = 25.0 bits (53), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 5/63 (7%)

Query: 220 LEEDKLEFNMSCPRMNSKFNIFPLFHVLTS-----PKNIINSKSPKTMINLNSKINNYKS 274
           L E  L FN+S      +F++  +   +T+     P   I+  +PK++  LN+   +Y+S
Sbjct: 149 LSEGSLWFNLSENNFWDRFDLKLVVGTVTNSTRGMPSKRISWDNPKSLSVLNTSAASYES 208

Query: 275 HLE 277
             E
Sbjct: 209 KFE 211



>EAY09305.1 on XP_806132   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 754

 Score = 25.0 bits (53), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 5/63 (7%)

Query: 220 LEEDKLEFNMSCPRMNSKFNIFPLFHVLTS-----PKNIINSKSPKTMINLNSKINNYKS 274
           L E  L FN+S      +F++  +   +T+     P   I+  +PK++  LN+   +Y+S
Sbjct: 203 LSEGSLWFNLSENNFWDRFDLKLVVGTVTNSTRGMPSKRISWDNPKSLSVLNTSAASYES 262

Query: 275 HLE 277
             E
Sbjct: 263 KFE 265



>EAY09305.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 24.6 bits (52), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 10/97 (10%)

Query: 117  IKHFISHCN---IIKCYDPNNAIIY---CIQNSYLSLSQCFIKENTSPLFIRIENTAEIV 170
            +KH I   N   II   D N  I        N  L+L   F  E    +   +EN +++ 
Sbjct: 1919 LKHVIKLANFSGIIVMSDTNTEITPENPLEDNDLLNLQLYF--ERKHEITSTLENDSDLE 1976

Query: 171  INHSHYDEDNSIDNTCNNPDMIKIE--SPQILSKLEN 205
            ++H   + D SIDN     D+I++   S QIL  L+N
Sbjct: 1977 LDHLGSNSDESIDNLKVYNDIIELHTYSTQILKYLDN 2013




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09306.1 hypothetical protein TVAG_394780 [Trichomonas
vaginalis G3]
         (118 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_813188   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   0.43 
XP_814246   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   0.50 
XP_805670   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   0.74 
XP_810676   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   2.0  
XP_811687   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   2.4  
XP_804106   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   5.1  
XP_815192   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   5.6  
XP_816751   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   7.4  
XP_805196   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   8.6  
XP_805195   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   8.7  
XP_815234   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   8.9  
XP_812850   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   8.9  

>EAY09306.1 on XP_813188   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1002

 Score = 26.6 bits (57), Expect = 0.43,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 80  TLPTEVEDARWSALNVLYCIESADIMNSLFDYV 112
           TLP   E+A W A    + +   D  N LF YV
Sbjct: 591 TLPAHDENAGWEANTKYHVVLQMDYNNGLFVYV 623



>EAY09306.1 on XP_814246   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1002

 Score = 26.2 bits (56), Expect = 0.50,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 16/35 (45%)

Query: 78  YTTLPTEVEDARWSALNVLYCIESADIMNSLFDYV 112
           + TLP   +D  W A    + +   D  N LF YV
Sbjct: 586 HLTLPAHDDDVEWEANKKYHVVLQMDYNNGLFVYV 620



>EAY09306.1 on XP_805670   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 246

 Score = 25.4 bits (54), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 12/43 (27%), Positives = 19/43 (44%)

Query: 72  VKTIMRYTTLPTEVEDARWSALNVLYCIESADIMNSLFDYVFT 114
           V +   +  L  EV ++ W A  VL   E  + +  LF+   T
Sbjct: 167 VNSARSWPALVAEVNNSTWKAHTVLGTAEGKESLGGLFNPTTT 209



>EAY09306.1 on XP_810676   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1040

 Score = 24.6 bits (52), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 80  TLPTEVEDARWSALNVLYCIESADIMNSLFDYV 112
           TLP   E+A W A    + +   D  + LF YV
Sbjct: 626 TLPAHGENAGWEANKEYHVVLQMDYNDGLFVYV 658



>EAY09306.1 on XP_811687   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 722

 Score = 24.3 bits (51), Expect = 2.4,   Method: Composition-based stats.
 Identities = 10/32 (31%), Positives = 19/32 (59%)

Query: 72  VKTIMRYTTLPTEVEDARWSALNVLYCIESAD 103
           + ++  ++TL  +V ++ W A NVL   + AD
Sbjct: 151 IDSLWDWSTLVEKVSESTWRAHNVLGTTDGAD 182



>EAY09306.1 on XP_804106   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1006

 Score = 23.5 bits (49), Expect = 5.1,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 13/33 (39%)

Query: 80  TLPTEVEDARWSALNVLYCIESADIMNSLFDYV 112
           TLP    D  W      + +   D  N LF YV
Sbjct: 593 TLPAHDNDVEWKPNKKYHVVLQMDYNNGLFVYV 625



>EAY09306.1 on XP_815192   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 722

 Score = 23.1 bits (48), Expect = 5.6,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 3/36 (8%)

Query: 78  YTTLPTEVEDARWSALNVLYCIESADIMNSLFDYVF 113
           ++TL  +V ++ W A NVL   + A   N+  D VF
Sbjct: 158 WSTLVDKVSESTWKAYNVLGTTDGA---NNRVDGVF 190



>EAY09306.1 on XP_816751   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1042

 Score = 22.7 bits (47), Expect = 7.4,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 80  TLPTEVEDARWSALNVLYCIESADIMNSLFDYV 112
           TLP   ++A W A    + +   D  + LF YV
Sbjct: 628 TLPAHGKNAGWEANKKYHVVLQMDYNDGLFVYV 660



>EAY09306.1 on XP_805196   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 731

 Score = 22.7 bits (47), Expect = 8.6,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 72  VKTIMRYTTLPTEVEDARWSALNVLYCIESADIMNSLFD 110
           V +   +  L  EV ++ W A  VL   E  + +  LF+
Sbjct: 129 VNSARSWPALVAEVNNSTWKAHTVLGTAEGKESLGGLFN 167



>EAY09306.1 on XP_805195   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 769

 Score = 22.7 bits (47), Expect = 8.7,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 72  VKTIMRYTTLPTEVEDARWSALNVLYCIESADIMNSLFD 110
           V +   +  L  EV ++ W A  VL   E  + +  LF+
Sbjct: 167 VNSARSWPALVAEVNNSTWKAHTVLGTAEGKESLGGLFN 205



>EAY09306.1 on XP_815234   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1032

 Score = 22.7 bits (47), Expect = 8.9,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 80  TLPTEVEDARWSALNVLYCIESADIMNSLFDYV 112
           TLP   E+A W A    +     D  + LF YV
Sbjct: 624 TLPAHDENAGWEANKKYHVALQMDCDDGLFVYV 656



>EAY09306.1 on XP_812850   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1032

 Score = 22.7 bits (47), Expect = 8.9,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 80  TLPTEVEDARWSALNVLYCIESADIMNSLFDYV 112
           TLP   E+A W A    +     D  + LF YV
Sbjct: 624 TLPAHDENAGWEANKKYHVALQMDCDDGLFVYV 656




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09321.1 hypothetical protein TVAG_394930 [Trichomonas
vaginalis G3]
         (180 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_814186   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   5.6  

>EAY09321.1 on XP_814186   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 883

 Score = 24.3 bits (51), Expect = 5.6,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 40/100 (40%), Gaps = 11/100 (11%)

Query: 21  KDKMYIIIKNNTNGAAKAFNFTSKMASTIRKSYNLKTASGNNQSITIQLFSKNLFKDEMI 80
           KDK  +++    +G  + +    K AS       L    GN Q   ++L  ++ F    I
Sbjct: 303 KDKKLMMMTACDDGRRRVYEIGDKGASWTEALGTLSRVWGNKQDKNVKLV-RSGFITANI 361

Query: 81  GYGDIPLNSLPVDKCTRNNLVLTPVNNQTKPIVLRAIMHL 120
              D+ L +LPV           P N +   +  + ++HL
Sbjct: 362 EDRDVMLVTLPV----------YPKNTEKGQVNEKGVLHL 391




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09334.1 hypothetical protein TVAG_395060 [Trichomonas
vaginalis G3]
         (230 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609533  variant erythrocyte surface antigen-1, alpha subun...    34   0.006
XP_001610196  variant erythrocyte surface antigen-1, alpha subun...    28   0.37 
XP_804106   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.49 
XP_001609539  variant erythrocyte surface antigen-1, beta subuni...    28   0.70 
XP_810676   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   0.91 
XP_814246   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.4  
XP_815234   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.7  
XP_812850   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.7  
XP_817816   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   1.8  
XP_813188   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   1.9  
XP_809850   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   2.0  
XP_814555   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   2.3  
XP_816459   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   3.0  
XP_807433   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   3.1  
XP_815807   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   3.2  
XP_845636  VSG  (Establishment)  [Trypanosoma brucei]                  25   4.4  
XP_001609540  variant erythrocyte surface antigen-1, alpha subun...    25   6.9  
XP_001350409  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   8.9  

>EAY09334.1 on XP_001609533  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1162

 Score = 34.3 bits (77), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/103 (29%), Positives = 56/103 (54%), Gaps = 14/103 (13%)

Query: 13  AVNALQIAIENSKQQRSK---------EVKLWQKRT-LE-LQNQVTSLQSQLSEAVNINT 61
           A+NA++ A+E +K +  +         +VKL + +T LE L N  + +  ++ E +   T
Sbjct: 664 AINAVKTALEKAKGELEEAVKKVNGGLDVKLGEAKTALEALTNGGSGILGEVGEKLETAT 723

Query: 62  QLQSD--MNEISNECEKLRKINNQLAKQLKE-KEQEIAKYNQL 101
             + D   N+IS    K+R++  +L K +KE K++E+   N+L
Sbjct: 724 NGEYDPGKNKISESINKVREVLKELEKVIKELKKKEVDDANEL 766



>EAY09334.1 on XP_001610196  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1330

 Score = 28.5 bits (62), Expect = 0.37,   Method: Composition-based stats.
 Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 16/92 (17%)

Query: 13  AVNALQIAIENSKQQRSKEVK--LWQKRTLELQNQVTSLQSQ--------------LSEA 56
           A+  +++A+  +K +  K VK  L  K   E + ++  L ++              L EA
Sbjct: 718 AIEGVKVALGTAKTELDKAVKNGLNGKELEEAKKKLEELTTKGGGNNGILGEVVDKLGEA 777

Query: 57  VNINTQLQSDMNEISNECEKLRKINNQLAKQL 88
            N N       N+IS   +K+R+I  ++ K+L
Sbjct: 778 TNGNNDFDQGKNKISAAIDKVREILGEIQKEL 809



>EAY09334.1 on XP_804106   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1006

 Score = 28.1 bits (61), Expect = 0.49,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 126 PTNKSTIQPLYEDLSPPPQNPKISPISPKLHKSTTPKRASTS 167
           P N    QP  +D +P PQ   +SP   +  K +   R ++S
Sbjct: 717 PQNSHLSQPSEKDATPSPQKQDLSPEKSENEKHSAGSRQASS 758



>EAY09334.1 on XP_001609539  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 884

 Score = 27.7 bits (60), Expect = 0.70,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 20/38 (52%)

Query: 129 KSTIQPLYEDLSPPPQNPKISPISPKLHKSTTPKRAST 166
           K T++ LY    P   NP +SP+S + +   +P  A T
Sbjct: 830 KDTLKCLYGGKDPSKCNPYLSPLSGQQYGQLSPAMAGT 867



>EAY09334.1 on XP_810676   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1040

 Score = 27.3 bits (59), Expect = 0.91,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 19/42 (45%)

Query: 126 PTNKSTIQPLYEDLSPPPQNPKISPISPKLHKSTTPKRASTS 167
           P N    QP  +D +P PQ   +SP   K  K +     +TS
Sbjct: 752 PQNSHLSQPSEKDTTPSPQKQGLSPEKSKNEKHSAGSGQTTS 793



>EAY09334.1 on XP_814246   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1002

 Score = 26.6 bits (57), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 9/53 (16%)

Query: 126 PTNKSTIQPLYEDLSPPPQNPKISPISPKLHK---------STTPKRASTSKS 169
           P N    QP  +D +P PQ   +SP   +  K         ST P  +STS +
Sbjct: 713 PQNSHLSQPSEKDATPSPQKQDLSPEKSENEKHSAGSQQASSTDPAGSSTSAA 765



>EAY09334.1 on XP_815234   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1032

 Score = 26.6 bits (57), Expect = 1.7,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 126 PTNKSTIQPLYEDLSPPPQNPKISPISPKLHKSTTPKRASTS 167
           P N+   Q   +D +P PQN  +SP   K  K +     +TS
Sbjct: 750 PQNRHLGQASEKDTTPSPQNQGLSPEKSKNEKYSAGSGQTTS 791



>EAY09334.1 on XP_812850   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1032

 Score = 26.6 bits (57), Expect = 1.7,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 126 PTNKSTIQPLYEDLSPPPQNPKISPISPKLHKSTTPKRASTS 167
           P N+   Q   +D +P PQN  +SP   K  K +     +TS
Sbjct: 750 PQNRHLGQASEKDTTPSPQNQGLSPEKSKNEKYSAGSGQTTS 791



>EAY09334.1 on XP_817816   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 912

 Score = 26.2 bits (56), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 4/58 (6%)

Query: 121 SITQLPTNKSTIQPLYEDLSPPPQNPKISPISPKLHKSTTPKRASTSKSGQLLQKAKE 178
           S+ + P   ST+       S  P +P ++P + K   S+TP     ++ GQ +  +K+
Sbjct: 743 SLEENPLETSTVS----SASIIPPSPPVTPNAQKTETSSTPAETQLTEQGQSMGSSKD 796



>EAY09334.1 on XP_813188   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1002

 Score = 26.2 bits (56), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 9/53 (16%)

Query: 126 PTNKSTIQPLYEDLSPPPQNPKISPISPKLHK---------STTPKRASTSKS 169
           P N    QP  +D +P PQ   +SP   K  K         S  P  +STS +
Sbjct: 714 PQNSHLSQPSEKDATPSPQKQDLSPEKSKNEKHSAGSGQAPSADPAGSSTSAA 766



>EAY09334.1 on XP_809850   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 915

 Score = 26.2 bits (56), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 9/59 (15%)

Query: 122 ITQLPTNKSTIQPLYEDLSPP---------PQNPKISPISPKLHKSTTPKRASTSKSGQ 171
           I  L  NK+ I PL E+ S P         P  P ++  + +   S+TP     ++ GQ
Sbjct: 734 IGVLNPNKALISPLKEEPSTPSPVPSASVVPPTPLVAATAQQTGNSSTPDGTHPTEQGQ 792



>EAY09334.1 on XP_814555   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 907

 Score = 25.8 bits (55), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 9/59 (15%)

Query: 122 ITQLPTNKSTIQPLYEDLSPP---------PQNPKISPISPKLHKSTTPKRASTSKSGQ 171
           I  L  NK+ I PL E+ S P         P  P ++  + +   S+TP     ++ GQ
Sbjct: 726 IGVLNPNKALISPLKEEPSTPSPVPSASVVPPTPLVAATAQQTGNSSTPDGTHRTEQGQ 784



>EAY09334.1 on XP_816459   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 904

 Score = 25.8 bits (55), Expect = 3.0,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 19/82 (23%)

Query: 112 GAGVATNPVSITQLPTNKSTI---QPLYEDLSPPPQNPK-------------ISPISPKL 155
           G  V    V +   P N++ I   +P  +  SP  +NP              ISP+SP  
Sbjct: 702 GVSVTVTNVLLYNRPLNEAEIVALKPNKDSTSPLEKNPSEHSTVSSTSIITPISPVSPNA 761

Query: 156 HKSTTPKRASTSKSGQLLQKAK 177
            K+ TP   ST    QL ++ +
Sbjct: 762 QKTETP---STPVGTQLTEQGQ 780



>EAY09334.1 on XP_807433   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1042

 Score = 25.4 bits (54), Expect = 3.1,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 19/42 (45%)

Query: 126 PTNKSTIQPLYEDLSPPPQNPKISPISPKLHKSTTPKRASTS 167
           P N    Q   +D +P PQN  +SP   K  K +     +TS
Sbjct: 753 PQNSHLGQASEKDTTPSPQNQGLSPEKSKNEKYSAGSGQTTS 794



>EAY09334.1 on XP_815807   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 899

 Score = 25.4 bits (54), Expect = 3.2,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 1/61 (1%)

Query: 118 NPVSITQLPTNKSTIQPLYEDLSPPPQNPKISPISPKLHKSTTPKRASTSKSGQLLQKAK 177
           N   I  L  N S    +  D   PP +P  +P + K   S+TP      + GQ ++ +K
Sbjct: 723 NKEPIQLLKENPSAPSKVSSDSIIPPSHPA-TPNAQKTEASSTPAGRHPMEQGQSMESSK 781

Query: 178 E 178
           +
Sbjct: 782 D 782



>EAY09334.1 on XP_845636  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 490

 Score = 25.0 bits (53), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 12/25 (48%), Positives = 15/25 (60%)

Query: 109 LDGGAGVATNPVSITQLPTNKSTIQ 133
           L GGAG  +  V+ITQ P N+   Q
Sbjct: 148 LIGGAGAKSCSVTITQPPKNEHGCQ 172



>EAY09334.1 on XP_001609540  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1349

 Score = 24.6 bits (52), Expect = 6.9,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 35/62 (56%), Gaps = 3/62 (4%)

Query: 10  LDAAVNALQIAIENSKQQRSKEVKLWQKRTLELQNQVTSLQSQLSEAVNINTQLQSDMNE 69
           + AA++ LQ A++  K+   K++   Q+R LE +  ++ +    +  V+++ +  + +N 
Sbjct: 799 VSAAIDGLQKALDALKEGVEKDIIEKQRRLLEAKKNLSHV---FAVGVSVDEEYTALLNA 855

Query: 70  IS 71
           I+
Sbjct: 856 IN 857



>EAY09334.1 on XP_001350409  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2223

 Score = 24.3 bits (51), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 8/24 (33%), Positives = 14/24 (58%)

Query: 138  DLSPPPQNPKISPISPKLHKSTTP 161
            D++PP + P   P  P + ++T P
Sbjct: 1742 DVAPPARAPADQPFDPTILQTTIP 1765




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09336.1 5-Nitroimidazole antibiotics resistance
protein, NimA-family-related protein [Trichomonas vaginalis G3]
         (137 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_845138  VSG  (Establishment)  [Trypanosoma brucei]                  26   0.74 
CAB52368  MIC5  (Adhesin)  [Eimeria tenella]                           24   3.0  
XP_829779  VSG  (Establishment)  [Trypanosoma brucei]                  23   8.1  
XP_001350798  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   8.1  

>EAY09336.1 on XP_845138  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 485

 Score = 26.2 bits (56), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 14/72 (19%)

Query: 30  HGATTGRKIATINNNPL-----GCLSISKPLQLSY---------TSSKPVCTATMFYESV 75
           HG T G K+A I+N PL        +I+K +Q +          +S++P     +  E+ 
Sbjct: 345 HGVTKGTKLAEISNLPLLTELETNYTINKAIQRNIPTAADACNCSSAQPTPEEKLCNEAT 404

Query: 76  IAEGKVEIVTHK 87
             EGK E +  K
Sbjct: 405 GDEGKCETLKEK 416



>EAY09336.1 on CAB52368  MIC5  (Adhesin)  [Eimeria tenella]
          Length = 255

 Score = 24.3 bits (51), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 9/36 (25%), Positives = 18/36 (50%)

Query: 13  CYGFTWDKNQKYTTFYFHGATTGRKIATINNNPLGC 48
           C GF+W+++ K  T +     +    A+++    GC
Sbjct: 215 CIGFSWNRSSKECTSHPSEVGSAEDKASVSGPRDGC 250



>EAY09336.1 on XP_829779  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 486

 Score = 23.1 bits (48), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 9/20 (45%), Positives = 13/20 (65%)

Query: 78  EGKVEIVTHKEEIKAALDTL 97
           E + E+  H++ IK  LDTL
Sbjct: 96  EQRAELTKHEQAIKGLLDTL 115



>EAY09336.1 on XP_001350798  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2359

 Score = 23.1 bits (48), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 14/53 (26%), Positives = 25/53 (47%)

Query: 64   PVCTATMFYESVIAEGKVEIVTHKEEIKAALDTLLQQFDVPLGKYAEASLKRT 116
            P+ T+T+ +   I          K++ K+++  L Q   +P G Y   +LK T
Sbjct: 1890 PLVTSTLAWSVGIGFAAFTYFYLKKKTKSSVGNLFQILQIPKGDYDIPTLKST 1942




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09346.1 hypothetical protein TVAG_417660 [Trichomonas
vaginalis G3]
         (807 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001348176  PfEMP1  (Establishment)  [Plasmodium falciparum]         32   0.24 
XP_001349437  PfEMP1  (Establishment)  [Plasmodium falciparum]         29   1.1  
AAY44834  MSA-1  (Invasion)  [Babesia bovis]                           28   1.9  
AAY44829  MSA-1  (Invasion)  [Babesia bovis]                           28   2.0  
AAY44830  MSA-1  (Invasion)  [Babesia bovis]                           28   2.4  
XP_954179  TashAT2  (Establishment)  [Theileria annulata]              28   2.6  
AAA83031  Hemolysin  (Invasion)  [Cryptosporidium parvum]              27   3.6  
ABA06451  MSA-2a2  (Invasion)  [Babesia bovis]                         27   4.0  
AAL15423  MSA-2b  (Invasion)  [Babesia bovis]                          27   4.0  
XP_001349513  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   4.2  

>EAY09346.1 on XP_001348176  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3119

 Score = 31.6 bits (70), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 43/107 (40%), Gaps = 10/107 (9%)

Query: 526  SSNSDVFSALAEYPSFDINQKDSNGLTALMYAIDRPCL-SIFEYLLSRDEIDVNSTDTEF 584
            S  +DV S+ +EY   DIN          +Y    P   ++ E +L   + D+ S D   
Sbjct: 2780 SDTTDVTSSESEYEELDIND---------IYVPGSPKYKTLIEVVLEPSKRDIPSDDIPS 2830

Query: 585  NKTPLMHLVAAPWNAQTQQMVDTLLIVHGLDINKQDKSNNTAIHIAA 631
            + TP+       WN   Q  V   +    LD+ + D S    ++I  
Sbjct: 2831 SDTPMNKFTDEEWNELKQDFVSQYIQSEPLDVPQYDVSTELPMNIVG 2877



>EAY09346.1 on XP_001349437  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2231

 Score = 29.3 bits (64), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)

Query: 366  QHLFEQLNTDVNSTNSSGYTLLHVVNDPSIAEYLFSLPNIDVSI-VNKDGYSPLHEYASR 424
            + L ++L  + N  N++  +L H  N PS    + ++ N DVSI ++ D   P +E+ + 
Sbjct: 2081 EELLDKLKKEWNKENNTNSSLTHTSNIPSGENSIKNVLNTDVSIQIDMDNPKPKNEFTNM 2140

Query: 425  GNI 427
              I
Sbjct: 2141 DTI 2143



>EAY09346.1 on AAY44834  MSA-1  (Invasion)  [Babesia bovis]
          Length = 320

 Score = 28.1 bits (61), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 2/63 (3%)

Query: 710 KPKQTGNKTPK--SKGKTPQSGAKSPNNSANKSGTKPKGNQSPQNKQQKRPNPVSTPHKT 767
           KP +  N++P   S    P  G       A  S   P G QSPQ +  +  +P STP   
Sbjct: 241 KPAEEINRSPGTGSDPHPPADGQAQQETPAPSSQPGPTGAQSPQTQGAENSSPESTPGNL 300

Query: 768 TEP 770
           + P
Sbjct: 301 SGP 303



>EAY09346.1 on AAY44829  MSA-1  (Invasion)  [Babesia bovis]
          Length = 318

 Score = 28.1 bits (61), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 2/63 (3%)

Query: 710 KPKQTGNKTPK--SKGKTPQSGAKSPNNSANKSGTKPKGNQSPQNKQQKRPNPVSTPHKT 767
           KP +  N++P   S    P  G       A  S   P G QSPQ +  +  +P STP   
Sbjct: 241 KPAEEINRSPGTGSDPHPPADGQAQQETPAPSSQPGPTGAQSPQTQGAENSSPESTPGNL 300

Query: 768 TEP 770
           + P
Sbjct: 301 SGP 303



>EAY09346.1 on AAY44830  MSA-1  (Invasion)  [Babesia bovis]
          Length = 322

 Score = 27.7 bits (60), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 2/63 (3%)

Query: 710 KPKQTGNKTPK--SKGKTPQSGAKSPNNSANKSGTKPKGNQSPQNKQQKRPNPVSTPHKT 767
           KP +  N++P   S    P  G       A  S   P G QSPQ +  +  +P STP   
Sbjct: 241 KPAEEINRSPGTGSDPHPPADGQAQQETPAPSSQPGPTGAQSPQTQGAENSSPESTPGNL 300

Query: 768 TEP 770
           + P
Sbjct: 301 SGP 303



>EAY09346.1 on XP_954179  TashAT2  (Establishment)  [Theileria annulata]
          Length = 1161

 Score = 28.1 bits (61), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 54/140 (38%), Gaps = 22/140 (15%)

Query: 677 QSIDT---IPNSSSE------EMEDSEVDIDEQEIDQTPIKS----------KPKQTGNK 717
           ++IDT   IP  S E      E+ED ++  D QE++   I++            K    +
Sbjct: 371 ENIDTQTDIPTGSIETQTDIQEVEDIDIQTDIQEVEDIGIQTIGNFSDITEVTKKHEKPE 430

Query: 718 TPKSKGKTPQSGAKSPNNSANKSGTKPKGNQSPQNKQQKRPNPVSTPHKTTEPSKLAPET 777
            PK +   P+     P     K G   K    P+  ++KR  P     +  EP     E 
Sbjct: 431 VPKRRPGRPRKHKPEPEQPKRKRGRPRKHKPEPEQPKRKRGRPRK---QKPEPESDHSEE 487

Query: 778 PTSPSSIDKSTDDQMSTRPP 797
            T P   ++ T+D +    P
Sbjct: 488 STQPHPQEQETEDSIKALGP 507



>EAY09346.1 on AAA83031  Hemolysin  (Invasion)  [Cryptosporidium parvum]
          Length = 229

 Score = 26.9 bits (58), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 3/39 (7%)

Query: 621 KSNNTAIHIAAMLER---KEIIDIISKLPDLNMNISNGI 656
           K +N+   I   LER    EII+ I+ LP++   I NGI
Sbjct: 156 KPSNSIFSIGQKLERLSSNEIINNINTLPEIENGIENGI 194



>EAY09346.1 on ABA06451  MSA-2a2  (Invasion)  [Babesia bovis]
          Length = 287

 Score = 26.9 bits (58), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 3/67 (4%)

Query: 707 IKSKPKQTGNKTPKSKGKTPQSGAKSPNNSANKSGTKPKGNQSPQNKQQKRPNPVSTPHK 766
           +K  P +T + T  S   TP +   +PN S + +G +P+  ++P+N+  + P+P S P  
Sbjct: 197 LKKMPSKTPSPT-SSPQATPGAKPAAPNTSES-AGGQPQ-QETPENRPSQAPSPQSPPQT 253

Query: 767 TTEPSKL 773
               S L
Sbjct: 254 EQSTSNL 260



>EAY09346.1 on AAL15423  MSA-2b  (Invasion)  [Babesia bovis]
          Length = 287

 Score = 26.9 bits (58), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 3/67 (4%)

Query: 707 IKSKPKQTGNKTPKSKGKTPQSGAKSPNNSANKSGTKPKGNQSPQNKQQKRPNPVSTPHK 766
           +K  P +T + T  S   TP +   +PN S + +G +P+  ++P+N+  + P+P S P  
Sbjct: 197 LKKMPSKTPSPT-SSPQATPGAKPAAPNTSES-AGGQPQ-QETPENRPSQAPSPQSPPQT 253

Query: 767 TTEPSKL 773
               S L
Sbjct: 254 EQSTSNL 260



>EAY09346.1 on XP_001349513  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2858

 Score = 27.3 bits (59), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 15/101 (14%)

Query: 529  SDVFSALAEYPSFDINQKDSNGLTALMYAIDRPCL-SIFEYLLSRDEIDVNSTDTEFNKT 587
            +D+ S+ +EY   DIN          +Y  D P   ++ E +L   + D  S+D      
Sbjct: 2527 TDITSSESEYEEMDIND---------IYVPDSPKYKTLIEVVLEPSKRDTPSSDA----- 2572

Query: 588  PLMHLVAAPWNAQTQQMVDTLLIVHGLDINKQDKSNNTAIH 628
            P+       WN   Q  +  +L     D+ K + S NT ++
Sbjct: 2573 PMNKFTDDEWNQLKQDFISGILENEQKDLPKNNISGNTPMN 2613




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09347.1 TKL family protein kinase [Trichomonas
vaginalis G3]
         (934 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    49   7e-07
XP_805259   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   1.5  
XP_818480   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   2.9  
XP_821677   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   3.4  
XP_807454   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   4.9  
XP_813585   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   5.5  
XP_817842   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   6.6  
XP_001349512  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   9.4  
XP_810777   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   9.6  

>EAY09347.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 48.9 bits (115), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 75/145 (51%), Gaps = 10/145 (6%)

Query: 95  SIAMEYISNGSVFQALRHRPQSPTLTPTNKTIIMIGCAHALAALHRIGIINRDLKSMNVL 154
           S+  E+++N   F+ L      PTLT  +    +     A+   H  GI++RD+K  NV+
Sbjct: 126 SLIFEHVNNTD-FKTL-----YPTLTIQDIKYYIYQLLKAMNYCHSQGIMHRDIKPHNVM 179

Query: 155 LD-DRLYPIICDFGISRFASSEQQLMTQQIGTPHWMAPELFLSNTYSN-KVDVYAYAVLL 212
           +D ++    + D+G++ F   EQ+  + ++ T ++  PEL +   Y +  +D+++   +L
Sbjct: 180 IDHEKKILRLIDWGLAEFYHPEQEY-SVRVATRYYKGPELLVDMRYYDYSLDIWSIGCML 238

Query: 213 WELLTESTP-FKGYNGQQIMIAVCQ 236
             ++ +  P F G++    ++ + +
Sbjct: 239 AGIIFKKEPFFYGHDNYDQLVKIAK 263



>EAY09347.1 on XP_805259   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 800

 Score = 28.9 bits (63), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 6/42 (14%)

Query: 340 NPQEIPRDPDVPIIPLLPFN------EASASTDAIPVPENLP 375
           NP+EI + P V +  +  +N      E SA  D IPVP   P
Sbjct: 674 NPKEIGKKPRVTVTNVFLYNRPLNSTEMSAIKDRIPVPTRAP 715



>EAY09347.1 on XP_818480   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 926

 Score = 28.1 bits (61), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%)

Query: 428 SLIASGSLAVFNIQGTLPSASPLSGPQNSNPENDKQLFSIL 468
            LI SG   V    GTL    P+ G + S  +ND++ FS+L
Sbjct: 236 GLIGSGGSGVKMHDGTL--VLPVEGTKKSEAKNDEKTFSLL 274



>EAY09347.1 on XP_821677   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 861

 Score = 27.7 bits (60), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 2/46 (4%)

Query: 369 PVPENLPVYEKPAEPPQSSQPPYKPPETINFALPQSPSVSPPPLSP 414
           PV EN P  E   +PP   QP    P T N      PS +    +P
Sbjct: 717 PVTENAP--ETVLQPPAKPQPSEHEPLTTNIGAGGVPSAASTATTP 760



>EAY09347.1 on XP_807454   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 825

 Score = 27.3 bits (59), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 13/44 (29%), Positives = 24/44 (54%)

Query: 340 NPQEIPRDPDVPIIPLLPFNEASASTDAIPVPENLPVYEKPAEP 383
           +P+EI + P V +  +  +N    ST+ I + +  PV ++  EP
Sbjct: 693 SPEEIGKKPSVTVTNVFLYNRPLNSTEMIAIKDRKPVPKRAPEP 736



>EAY09347.1 on XP_813585   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 800

 Score = 26.9 bits (58), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 6/42 (14%)

Query: 340 NPQEIPRDPDVPIIPLLPFN------EASASTDAIPVPENLP 375
           NP+EI + P V +  +  +N      E  A  D IPVP   P
Sbjct: 673 NPKEIGKKPRVTVTNVFLYNRPLNPTEMKAIKDRIPVPTRAP 714



>EAY09347.1 on XP_817842   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 897

 Score = 26.9 bits (58), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 5/74 (6%)

Query: 340 NPQEIPRDPDVPII--PLLPFNEASASTDAIPVPENLPVYEKPAEPPQSSQPPYKPP--- 394
           N +    D DV +    +L +N   AS +   + +N     KP EP + + PP  P    
Sbjct: 699 NAENTAGDEDVSVTVSNVLLYNRPLASEEIAELAKNKITIPKPEEPKKLTTPPRSPAVSG 758

Query: 395 ETINFALPQSPSVS 408
             +  A+ QS S  
Sbjct: 759 SGVEVAVSQSNSAG 772



>EAY09347.1 on XP_001349512  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2980

 Score = 26.6 bits (57), Expect = 9.4,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 63/171 (36%), Gaps = 29/171 (16%)

Query: 248  PTKLRSLIQRCWDFDPNKRPSFNQ---ICKVLDAKKVVFEG-----TDLDAVDIFLKDLQ 299
            P  LR  I+   +F   ++   +Q   +CK  +    V         D +  D   K+  
Sbjct: 1433 PPFLRWFIEWGEEFCKKRKEQVDQLVNVCKECNVSDSVISSGNKTCNDKEKCDACKKECT 1492

Query: 300  ADESWREANKGNRQPPLKMFASARNQQQYQDSYNIPQTVYNPQEIPRDPDVPIIPLLPFN 359
              E+W +  KG+     + +A  ++   Y +  ++ ++ +  + + +   +  IP    N
Sbjct: 1493 QYENWLQTWKGHYNKQKERYAKVKSTSPYNNDNDVNKSTHAYEYLSK--KLTNIPCTNGN 1550

Query: 360  ----------EASASTDAIPVPENLPVYE-------KPAEPPQSSQPPYKP 393
                      +   STD +P     P  E         A PPQ  +PP  P
Sbjct: 1551 TTGKCDYKCMDQRTSTDGMPASLEYPPKEINGKCDCTKALPPQ--EPPSTP 1599



>EAY09347.1 on XP_810777   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 846

 Score = 26.2 bits (56), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 6/42 (14%)

Query: 340 NPQEIPRDPDVPIIPLLPFN------EASASTDAIPVPENLP 375
           +P+EI + P V +  +  +N      E SA  D IPVP   P
Sbjct: 711 SPKEIGKKPRVTVTNVFLYNRPLNSTEMSAIKDRIPVPTRAP 752




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09354.1 hypothetical protein TVAG_417760 [Trichomonas
vaginalis G3]
         (650 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    27   5.3  
XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 27   5.7  

>EAY09354.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 26.6 bits (57), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 10/15 (66%), Positives = 15/15 (100%)

Query: 236 NLKVILPKSFADVSS 250
           +LK+ILPK++ADV+S
Sbjct: 19  DLKIILPKTYADVNS 33



>EAY09354.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 26.6 bits (57), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 605  VSINNGSIQEFIKEICFSCGHNISPLFSNYIKFGDDISKSLQ 646
            + INNG I+  +  I  +  HNI  + +  + + +D+SKS Q
Sbjct: 1619 IQINNGRIESNLLNI-LNMKHNIDTILNKAMDYMNDVSKSDQ 1659




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09357.1 hypothetical protein TVAG_417790 [Trichomonas
vaginalis G3]
         (48 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_819343   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   0.26 
XP_001347692  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   0.54 
XP_814625   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   0.80 
XP_811934   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   1.0  
XP_807986   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   1.1  
XP_820458   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   2.0  
XP_001351563  PfEMP1  (Establishment)  [Plasmodium falciparum]         22   2.2  
XP_813606   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           21   3.6  
XP_817721   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           20   8.1  

>EAY09357.1 on XP_819343   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 953

 Score = 24.6 bits (52), Expect = 0.26,   Method: Composition-based stats.
 Identities = 12/28 (42%), Positives = 16/28 (57%)

Query: 6   KKVSRRTKKVEKDLDQIFDSKIDVPPPT 33
           K   + TK +EKD+ Q    K+DV  PT
Sbjct: 139 KDAKKGTKVLEKDVSQGEKKKVDVSRPT 166



>EAY09357.1 on XP_001347692  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2994

 Score = 23.5 bits (49), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 7/31 (22%)

Query: 3    TDIKKVSRRTKKVEKDLDQIFDSKIDVPPPT 33
            TDI K+++ T+ V+ ++D+IF       PPT
Sbjct: 988  TDISKLNKHTEAVKTNIDRIF-------PPT 1011



>EAY09357.1 on XP_814625   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 941

 Score = 23.1 bits (48), Expect = 0.80,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 6   KKVSRRTKKVEKDLDQIFDSKIDVPPPT 33
           K   + TK +EKD+ +    K+DV  PT
Sbjct: 142 KDAKKGTKVLEKDVSKGEKKKVDVSRPT 169



>EAY09357.1 on XP_811934   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 870

 Score = 22.7 bits (47), Expect = 1.0,   Method: Composition-based stats.
 Identities = 11/32 (34%), Positives = 19/32 (59%)

Query: 2   KTDIKKVSRRTKKVEKDLDQIFDSKIDVPPPT 33
           K ++ K +R T+ +E+D  +    K+DV  PT
Sbjct: 134 KEEVMKDARVTQFLEEDTSEGPKKKVDVSRPT 165



>EAY09357.1 on XP_807986   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1054

 Score = 22.7 bits (47), Expect = 1.1,   Method: Composition-based stats.
 Identities = 8/15 (53%), Positives = 12/15 (80%)

Query: 16  EKDLDQIFDSKIDVP 30
           E DLD++ DSK+ +P
Sbjct: 708 EDDLDELPDSKVTIP 722



>EAY09357.1 on XP_820458   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 923

 Score = 21.9 bits (45), Expect = 2.0,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 6   KKVSRRTKKVEKDLDQIFDSKIDVPPPT 33
           K   + TK +EK + Q    K+DV  PT
Sbjct: 143 KDAEKGTKVLEKGVSQGEKKKVDVSRPT 170



>EAY09357.1 on XP_001351563  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2149

 Score = 21.9 bits (45), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 7/15 (46%), Positives = 11/15 (73%)

Query: 29  VPPPTIDPTDLSYLL 43
           VPP  +DPT++  L+
Sbjct: 518 VPPEGVDPTEIKVLI 532



>EAY09357.1 on XP_813606   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 930

 Score = 21.2 bits (43), Expect = 3.6,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 16/29 (55%)

Query: 5   IKKVSRRTKKVEKDLDQIFDSKIDVPPPT 33
           +KK    T+ +E+D  +    K+DV  PT
Sbjct: 139 LKKPKGETRVLEEDASKDQKKKVDVSRPT 167



>EAY09357.1 on XP_817721   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 922

 Score = 20.4 bits (41), Expect = 8.1,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)

Query: 5   IKKVSRRTKKVEKDLDQIFDSKIDV--PPP 32
           +KKV    K+V+K + Q+  SK D    PP
Sbjct: 466 VKKVLATWKEVDKRVSQLCPSKSDAERAPP 495




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09359.1 ribosomal protein L34e, putative [Trichomonas
vaginalis G3]
         (116 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_818193   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.17 
XP_820393   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   1.3  
XP_821703   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   1.5  
XP_817615   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   2.4  

>EAY09359.1 on XP_818193   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 838

 Score = 27.7 bits (60), Expect = 0.17,   Method: Composition-based stats.
 Identities = 9/23 (39%), Positives = 16/23 (69%)

Query: 59 KTCELRRMKKNQRTVSRPYGGVY 81
          + CE+RR+ K+Q+   RP+  +Y
Sbjct: 32 RYCEIRRLCKDQQHTHRPHTNIY 54



>EAY09359.1 on XP_820393   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 836

 Score = 25.0 bits (53), Expect = 1.3,   Method: Composition-based stats.
 Identities = 8/19 (42%), Positives = 14/19 (73%)

Query: 59 KTCELRRMKKNQRTVSRPY 77
          + CE+RR +K+Q+   RP+
Sbjct: 39 RYCEIRRHQKDQQHTHRPH 57



>EAY09359.1 on XP_821703   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 912

 Score = 25.0 bits (53), Expect = 1.5,   Method: Composition-based stats.
 Identities = 8/19 (42%), Positives = 14/19 (73%)

Query: 59 KTCELRRMKKNQRTVSRPY 77
          + CE+RR +K+Q+   RP+
Sbjct: 39 RYCEIRRHQKDQQHTHRPH 57



>EAY09359.1 on XP_817615   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 860

 Score = 24.3 bits (51), Expect = 2.4,   Method: Composition-based stats.
 Identities = 8/23 (34%), Positives = 15/23 (65%)

Query: 59 KTCELRRMKKNQRTVSRPYGGVY 81
          + CE+R + K+Q+   RP+  +Y
Sbjct: 41 RYCEIRSLWKDQQHTHRPHTHIY 63




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09361.1 hypothetical protein TVAG_417830 [Trichomonas
vaginalis G3]
         (367 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAM27174  cGMP-dependent protein kinase  (Invasion)  [Toxoplasma...    26   2.8  
XP_001611205  variant erythrocyte surface antigen-1, beta subuni...    26   3.3  

>EAY09361.1 on AAM27174  cGMP-dependent protein kinase  (Invasion)  [Toxoplasma
           gondii]
          Length = 255

 Score = 26.2 bits (56), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 6/52 (11%)

Query: 175 RTLPDEPQDRNLYTMPITINIPTRDP--PPEKPTPVTVFERQPSRKPIFKED 224
           +TL  E Q+ +L       ++P+  P  P EKP      +R+P++K I K+D
Sbjct: 107 KTLEAEAQEDDLKREAPNQDVPSEAPEGPKEKPGG----DRKPAQKAILKQD 154



>EAY09361.1 on XP_001611205  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 1146

 Score = 26.2 bits (56), Expect = 3.3,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 14/22 (63%)

Query: 345 TPAPPPLEGVAFWTSLTRYNTN 366
           T  PPP EG  +W +++  +TN
Sbjct: 208 TTVPPPPEGQYYWPTISDDSTN 229




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09367.1 hypothetical protein TVAG_417890 [Trichomonas
vaginalis G3]
         (160 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_816729   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   3.2  
XP_001348176  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   8.1  

>EAY09367.1 on XP_816729   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 890

 Score = 24.6 bits (52), Expect = 3.2,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 71  ITKMSKRAISPPKPRITSRSAMDGYPSLVERTINQESTLQKN 112
           I  ++K  I+ PKP +   S  D   + V  +  +E+  Q N
Sbjct: 719 IAGLAKNTITIPKPEVLKTSGEDSRSTTVSGSDVEEAVTQSN 760



>EAY09367.1 on XP_001348176  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3119

 Score = 23.5 bits (49), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 2/66 (3%)

Query: 57   ELTKKQIMNTWNRAITKMSKRAISPPKPRITSRSAMDGYPSLVERTINQESTLQKNPFSE 116
            E  KK   + W   +  +S  ++S        ++  D Y    E     +S+    P SE
Sbjct: 2075 EWWKKYAEDIWKGMVCALS-HSVSASDKDSMQKNLTDKY-KYKEVKFTSKSSKHNIPLSE 2132

Query: 117  FEEEPQ 122
            FE++PQ
Sbjct: 2133 FEKKPQ 2138




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09378.1 hypothetical protein TVAG_418000 [Trichomonas
vaginalis G3]
         (232 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_819737   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   2.7  
XP_845133  VSG  (Establishment)  [Trypanosoma brucei]                  25   2.9  
XP_805038   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   9.1  

>EAY09378.1 on XP_819737   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1112

 Score = 25.8 bits (55), Expect = 2.7,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 54/127 (42%), Gaps = 14/127 (11%)

Query: 72   KEKSSEKIDLSFESFESESKKSENTDKSKADTVKSNKSNNKTTDTEKSNMKTDKSENKTQ 131
            + +  + ++L+ E+ +  S  +  T   ++ ++++ + N++ T    S++   KS+ +  
Sbjct: 952  EHQVQQSVELATENDDVRSTGTGTTGAEESLSLEAGERNSERTMNSDSSITPSKSDAEPT 1011

Query: 132  KADEKSIKDDKKSTQNSPIKPEQEKKVENKKE-----TPTPQNEQKSKQEKKESFENVEI 186
             A++         T N       E  VEN KE      P P N   +  E   S E+   
Sbjct: 1012 SAED---------TDNISWTERAEFSVENGKEVPQTVVPAPGNTNTTPGETMISLESNAT 1062

Query: 187  KPTEDEI 193
             P++  I
Sbjct: 1063 APSDAGI 1069



>EAY09378.1 on XP_845133  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 500

 Score = 25.4 bits (54), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 15/134 (11%)

Query: 19  TTMKTQTDEKEKKTESKKDSEQSKKTNSFSSSFDDFETQSAIASEGPKNETEKKEKSSEK 78
           TT K + +E EK   ++  + ++K    ++S   DFE+    A++G K+ T+  +     
Sbjct: 349 TTTKQKEEEAEKLLGTEDKTAEAKFVEPYNSQKFDFEST---ATDGGKSLTDLVDGDDYG 405

Query: 79  IDLSFESFESESKKSENTDKSKADTVKSNKSNNKTTDTEKSNMKTDKSENKTQKADEKSI 138
           + L+   +E+       T K+ A T  + K + KT   +K+  K D  +NKT  A+ K+ 
Sbjct: 406 LGLAICHYEA-------TKKAIATTKTTPKGDGKTDSADKTEEKKD-GDNKTTAAECKAT 457

Query: 139 KDDK----KSTQNS 148
           ++ K    K T N+
Sbjct: 458 EEGKCDKTKCTWNA 471



>EAY09378.1 on XP_805038   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 927

 Score = 24.3 bits (51), Expect = 9.1,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 45/122 (36%), Gaps = 7/122 (5%)

Query: 65  PKNETEKKEKSSEKIDLSFESFESESKKSENTD--KSKADTVKSNKSNNKTTDTEKSNMK 122
           P NETE    ++ K+ +     +S    +  +   +S  D V +N              +
Sbjct: 675 PLNETEIGALNANKVTIPPPERKSAKAAAATSPSVESANDRVNTNTQPTVPPPATAGPQQ 734

Query: 123 TDKSENKTQKADEKS---IKDDKKSTQNSPI--KPEQEKKVENKKETPTPQNEQKSKQEK 177
           TD++   T             + KS +  P   +PE+ K  E++ E P P     +    
Sbjct: 735 TDQTTLNTSSVPSGGAPPTPAEPKSEEPKPAESRPEEPKPAESESEEPKPAEPNAATSSA 794

Query: 178 KE 179
           +E
Sbjct: 795 RE 796




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09381.1 AGC family protein kinase [Trichomonas
vaginalis G3]
         (404 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    33   0.017
XP_001347692  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   2.3  

>EAY09381.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 33.5 bits (75), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 4/96 (4%)

Query: 121 QLFMAIEYMQTAMAMVHGNICLDVFMVD-ENNYIRLVDFWGIQPINNCSNSQTLVFNKIP 179
           QL  A+ Y  +   ++H +I     M+D E   +RL+D WG+    +     ++      
Sbjct: 155 QLLKAMNYCHSQ-GIMHRDIKPHNVMIDHEKKILRLID-WGLAEFYHPEQEYSVRVATRY 212

Query: 180 FQTPEYL-NTGIITPSADIWALGVFLYFICVGSSPF 214
           ++ PE L +      S DIW++G  L  I     PF
Sbjct: 213 YKGPELLVDMRYYDYSLDIWSIGCMLAGIIFKKEPF 248



>EAY09381.1 on XP_001347692  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2994

 Score = 26.9 bits (58), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 17/37 (45%)

Query: 148  DENNYIRLVDFWGIQPINNCSNSQTLVFNKIPFQTPE 184
            D  + IR  D WGIQ   +       +F KI  + P+
Sbjct: 2122 DIGDIIRGKDLWGIQDFKDLQTKLVTIFGKIKEEIPD 2158




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09383.1 SNF7 family protein [Trichomonas vaginalis
G3]
         (197 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609667  variant erythrocyte surface antigen-1, alpha subun...    27   0.80 
XP_805783   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   5.9  

>EAY09383.1 on XP_001609667  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1303

 Score = 26.9 bits (58), Expect = 0.80,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 7/63 (11%)

Query: 57  KLERAKLVLKAKKAREVLIQKTDGMLTNLQEQLNNLEQARITREFAENMQQTNSVLKEMN 116
           +L  A+  L+ +K  E+      G+   LQE    LE+AR   E  E++ + +  LKE  
Sbjct: 674 QLGNAQEALERRKGEEI-----KGVQKKLQEAKKGLEEARKELETGEDLDEDD--LKEAK 726

Query: 117 EKL 119
           E L
Sbjct: 727 EAL 729



>EAY09383.1 on XP_805783   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 408

 Score = 24.3 bits (51), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 9/24 (37%), Positives = 16/24 (66%)

Query: 162 EKMWKEMHGEESPQEAAEEIQAEK 185
           EK W+ + G+E+P+E +  +  EK
Sbjct: 231 EKKWQLLSGDETPKEHSSTLGTEK 254




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09385.1 Dedicator of cytokinesis family protein,
partial [Trichomonas vaginalis G3]
         (1482 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609618  variant erythrocyte surface antigen-1, alpha subun...    29   3.1  
XP_844699  VSG  (Establishment)  [Trypanosoma brucei]                  28   3.2  

>EAY09385.1 on XP_001609618  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1325

 Score = 28.9 bits (63), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)

Query: 1395 KIKEAANRVKSELKDLAA--KEALHKKKINIDQNT 1427
            KI EA N+V   LK++    KE L K++ N+D+NT
Sbjct: 787  KISEAINKVLEMLKEMEKQLKEVLEKEQSNMDENT 821



>EAY09385.1 on XP_844699  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 341

 Score = 28.5 bits (62), Expect = 3.2,   Method: Composition-based stats.
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 4/61 (6%)

Query: 845 EKSDNTIEDLTKKVLGGINELSSTGSTAS-KPGARRFTSIKQTRTTDKVKRPQEQKEILN 903
           EKSD +    T+   G      + GST + +P A+R T+   +  T+  KRP E++    
Sbjct: 270 EKSDRSTPSKTE---GPHTTARTDGSTQNERPNAQRNTTATTSDMTNNTKRPPEEQRSCT 326

Query: 904 I 904
           I
Sbjct: 327 I 327




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09395.1 ankyrin repeat protein, putative [Trichomonas
vaginalis G3]
         (208 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_804330   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.43 
XP_810574   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   0.69 
XP_804487   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.2  
XP_816821   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   2.0  
XP_001347690  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   3.4  
XP_817165   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   4.8  
XP_815514   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   5.4  
XP_812593   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   7.5  
XP_804421   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   7.6  
XP_821904   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   7.8  
XP_818091   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   8.5  
XP_817993   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   8.5  
XP_819342   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   8.5  
XP_818312   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   8.9  
XP_813123   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   9.4  
XP_821425   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   9.9  
XP_001347288  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   10.0 

>EAY09395.1 on XP_804330   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 910

 Score = 28.1 bits (61), Expect = 0.43,   Method: Composition-based stats.
 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 8/61 (13%)

Query: 132 LLVSYGADVNEKDNTGQTALHYAAAIDNDKAIDIL-LSHDADINAEDNNGEKPALRLHKK 190
           LLV  GA  NE   +G  ++   A I ND  ++    S   D++A        A RLH+ 
Sbjct: 112 LLVIAGAQFNESSGSGSASMQLMARISNDDGVNWSPYSRPGDLDAF-------AARLHQM 164

Query: 191 L 191
           L
Sbjct: 165 L 165



>EAY09395.1 on XP_810574   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 954

 Score = 27.3 bits (59), Expect = 0.69,   Method: Composition-based stats.
 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 8/61 (13%)

Query: 132 LLVSYGADVNEKDNTGQTALHYAAAIDNDKAIDIL-LSHDADINAEDNNGEKPALRLHKK 190
           LLV  GA  NE   +G  ++   A I ND  ++    S   D++A        A RLH+ 
Sbjct: 145 LLVIAGAQFNESAGSGSASMQLMARISNDDGVNWSPYSRPGDLDAF-------AARLHQM 197

Query: 191 L 191
           L
Sbjct: 198 L 198



>EAY09395.1 on XP_804487   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 752

 Score = 26.6 bits (57), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/26 (46%), Positives = 17/26 (65%)

Query: 114 GKTPLIVASKSNHEEMVALLVSYGAD 139
           GKTPL+ A+ +N E    + +SY AD
Sbjct: 570 GKTPLLTATLANTESNHTMGLSYTAD 595



>EAY09395.1 on XP_816821   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 782

 Score = 25.8 bits (55), Expect = 2.0,   Method: Composition-based stats.
 Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 11/98 (11%)

Query: 103 YGININAKDNQGKTPLIVASKSNHEEMVALLVSYGADVNEKDNTGQTALHYAAAIDNDKA 162
           +G N    +   ++  I A+  N + M+  +  Y       +N G+  LH     DN   
Sbjct: 355 WGNNQKRNEKGVRSGFITATIENRDVMLVTVPVYSKKEKNGNNNGKGVLHLWLT-DNTHI 413

Query: 163 IDI-LLSHDADINAED---------NNGEKPALRLHKK 190
           +DI  +S D D+ A           NN ++  + L++K
Sbjct: 414 VDIGPVSDDDDVAASSLLYKSAGSGNNNDERLIALYEK 451



>EAY09395.1 on XP_001347690  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2215

 Score = 25.4 bits (54), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 12/23 (52%), Positives = 13/23 (56%)

Query: 39   NNLNAFFVHFDQTNDINDDGIPS 61
            NN  A     D  NDI +DGIPS
Sbjct: 1905 NNTTASDTPSDTQNDIQNDGIPS 1927



>EAY09395.1 on XP_817165   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 750

 Score = 24.6 bits (52), Expect = 4.8,   Method: Composition-based stats.
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 114 GKTPLIVASKSNHEEMVALLVSYGAD 139
           G TPL+ A+ +N+     + VSY AD
Sbjct: 572 GNTPLLTATLANNNSNHTMGVSYTAD 597



>EAY09395.1 on XP_815514   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 811

 Score = 24.6 bits (52), Expect = 5.4,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 2/61 (3%)

Query: 116 TPLIVASKSNHEEMVALLVSYGADVNEKDNTGQTALHYAAAIDNDKAIDI-LLSHDADIN 174
           T  I  + +N + M+  L  Y       +N G++ LH     DN   +DI  +S D D  
Sbjct: 375 TATIDGADNNRDVMLVTLPVYSKKEKNGNNNGKSVLHLWVT-DNTHIVDIGPVSDDEDAA 433

Query: 175 A 175
           A
Sbjct: 434 A 434



>EAY09395.1 on XP_812593   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 868

 Score = 24.3 bits (51), Expect = 7.5,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 24/45 (53%)

Query: 97  SKLLISYGININAKDNQGKTPLIVASKSNHEEMVALLVSYGADVN 141
           +K  +S  + I+    +G +PLI A  ++ +  V   +SY ++ N
Sbjct: 539 NKFTLSATVTIHEVPKEGSSPLIGARLNDQDGTVLFQLSYTSEGN 583



>EAY09395.1 on XP_804421   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 864

 Score = 24.3 bits (51), Expect = 7.6,   Method: Composition-based stats.
 Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 9/83 (10%)

Query: 116 TPLIVASKSNHEEMVALLVSYGADVNEKDNTGQTALHYAAAIDNDKAIDI-LLSHDADIN 174
           T  I    +N + M+  L  Y       +N G++ LH     DN   +DI  +S D D  
Sbjct: 432 TATIDGVDNNRDVMLVTLPVYSKKEKNGNNNGKSVLHLWVT-DNAHIVDIGPVSDDEDAA 490

Query: 175 AE-------DNNGEKPALRLHKK 190
           A        +NN +  AL   KK
Sbjct: 491 ASSLLYKSGNNNNKLIALYEKKK 513



>EAY09395.1 on XP_821904   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 851

 Score = 24.3 bits (51), Expect = 7.8,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 18/39 (46%)

Query: 144 DNTGQTALHYAAAIDNDKAIDILLSHDADINAEDNNGEK 182
           DNT    +   +  D+D A   LL   A+    DN GEK
Sbjct: 424 DNTHIVDIGPVSEEDDDAAASTLLYKSAESGNGDNEGEK 462



>EAY09395.1 on XP_818091   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 828

 Score = 23.9 bits (50), Expect = 8.5,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 24/45 (53%)

Query: 97  SKLLISYGININAKDNQGKTPLIVASKSNHEEMVALLVSYGADVN 141
           +K  +S  ++I+    +G  PLI A  ++ +  V   +SY ++ N
Sbjct: 534 NKFTLSATVSIHEVPKEGSIPLIGARLNDKDSTVLFQLSYTSERN 578



>EAY09395.1 on XP_817993   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 830

 Score = 23.9 bits (50), Expect = 8.5,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 33/86 (38%), Gaps = 14/86 (16%)

Query: 118 LIVASKSNHEEMVALLVSYGADVNEKDNTGQTALHY-------------AAAIDNDKAID 164
            I A+  N + M+  L  Y    ++K+N G+  LH               +  D D A  
Sbjct: 367 FITATIENRDVMLVTLPVYSEKADKKEN-GKNELHLWLTDNTHIVYIGPVSGKDEDVAAS 425

Query: 165 ILLSHDADINAEDNNGEKPALRLHKK 190
            LL           NG++  + L++K
Sbjct: 426 SLLYKSGKSGKSKTNGKEELIALYEK 451



>EAY09395.1 on XP_819342   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 825

 Score = 23.9 bits (50), Expect = 8.5,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 24/45 (53%)

Query: 97  SKLLISYGININAKDNQGKTPLIVASKSNHEEMVALLVSYGADVN 141
           +K  +S  ++I+    +G  PLI A  ++ +  V   +SY ++ N
Sbjct: 531 NKFTLSATVSIHEVPKEGSIPLIGARLNDKDSTVLFQLSYTSERN 575



>EAY09395.1 on XP_818312   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 928

 Score = 23.9 bits (50), Expect = 8.9,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 19/42 (45%)

Query: 144 DNTGQTALHYAAAIDNDKAIDILLSHDADINAEDNNGEKPAL 185
           DNT    +   +  D+D A   LL   A    +DNN E  AL
Sbjct: 397 DNTHIVDIGPISGKDDDAAASALLYKSAGSGTDDNNDELIAL 438



>EAY09395.1 on XP_813123   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1048

 Score = 23.9 bits (50), Expect = 9.4,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 6/82 (7%)

Query: 68  SQGSDINAKSITLGYSALHSTSKYNCIEESKLLI-SYGININAKDNQGKTPLIVASKSNH 126
           + G  +   ++ L    L  +  Y  +  SK+ I S G+     +    T  +VAS+SN 
Sbjct: 683 ATGGHVTVTNVMLYNEKLLGSELYE-LHASKVTIPSLGVEKQPTEQAANTGALVASESNS 741

Query: 127 EEMVALLVSYGADVNEKDNTGQ 148
           EE    + +   ++NE D   Q
Sbjct: 742 EE----IATSHEELNEGDTDEQ 759



>EAY09395.1 on XP_821425   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 787

 Score = 23.9 bits (50), Expect = 9.9,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 8/45 (17%)

Query: 107 INAKDNQGKTPLIVASKSNHEEMVALLVSYGADVNEKDNTGQTAL 151
           ++  D+   + L+  S +N+EE++AL         EK   G+++L
Sbjct: 413 VSGDDDAAASSLLYKSGNNNEELIALY--------EKKGGGESSL 449



>EAY09395.1 on XP_001347288  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2241

 Score = 23.9 bits (50), Expect = 10.0,   Method: Composition-based stats.
 Identities = 9/13 (69%), Positives = 10/13 (76%)

Query: 49   DQTNDINDDGIPS 61
            D  NDI +DGIPS
Sbjct: 1937 DTQNDIQNDGIPS 1949




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09413.1 FYVE zinc finger family protein [Trichomonas
vaginalis G3]
         (439 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001350935  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   1.4  
XP_829784  VSG  (Establishment)  [Trypanosoma brucei]                  27   1.9  
XP_810068   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.0  
XP_001349737  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   3.7  
XP_820184   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   5.7  
XP_001609041  variant erythrocyte surface antigen-1, alpha subun...    25   8.3  

>EAY09413.1 on XP_001350935  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2268

 Score = 28.1 bits (61), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 2/43 (4%)

Query: 223 RRMYFQGPATKFSRKYTNNRYLAIFNDGLLVLESYMVINWKPN 265
           RR  + G  TK+++KYT N   +   +G  VL++  V++ K N
Sbjct: 945 RRRLYVGGLTKWAKKYTGNTGESKSQEG--VLQTKAVVDGKAN 985



>EAY09413.1 on XP_829784  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 474

 Score = 27.3 bits (59), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 48/121 (39%), Gaps = 3/121 (2%)

Query: 92  EAFDGLKQLVDVYFEYIYAYHSNMPNIKTERTKNAAFSKLVEYFETNAKDTIEAFLITPV 151
           +A D   +L   +     A  S +        KNA  +  V   +T A  T     +   
Sbjct: 315 KALDATGKLQIPWLSKFTAAISRLEAAHKNSLKNARIAAEVTNLKTAALRTYLQATVEVT 374

Query: 152 QRPPRYRLLLQELIKYTPKETQEYTDLNKYLQEIMQAIASVDDKIDVFDEYNKMCQLQSS 211
           Q P   + L Q+  K T +  ++  +     Q   +A  S+ DK   F+E +K C+L+  
Sbjct: 375 QPPQPTKALSQQADKATQEPAKKVCNEAGGDQ---KACESLKDKDCTFNEKDKKCELKKE 431

Query: 212 V 212
           V
Sbjct: 432 V 432



>EAY09413.1 on XP_810068   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1147

 Score = 27.3 bits (59), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 222 GRRMYFQGPATKFSRKYTNNR-YLAIFNDGLLVLESYMVINWKPNKFYK 269
           G RM        F   YT+ + +LAI  D     +   ++ W+PNK Y+
Sbjct: 687 GVRMNDTSSTVLFGLSYTHEKKWLAITEDAADPEDVVDIVKWEPNKTYQ 735



>EAY09413.1 on XP_001349737  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2199

 Score = 26.6 bits (57), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 23/118 (19%), Positives = 53/118 (44%), Gaps = 11/118 (9%)

Query: 97   LKQLVDVYFEYIYAYHSNMPNIKTERTKNAAFSKLVEYFETNAKDTIEAFLITPVQRPPR 156
            +K+L+  + EY    ++ + +  +  TKN   SK +       K  ++ ++    +   +
Sbjct: 1522 MKELLKRWLEYFLEDYNKIKHKISHCTKNGKGSKCI-------KGCVDKWVQQKKEEWKQ 1574

Query: 157  YRLLLQELIKYTPKETQEYTDLNKYLQEIMQAIASVDDKIDV--FDEYNKMCQLQSSV 212
             +    E  +Y  K + EY ++  +L+  +  IA V+D+ +V    ++   C   +S 
Sbjct: 1575 IKERFNE--QYKSKTSDEYFNVKSFLETWIPKIAVVNDQDNVIKLSKFGNSCGCSASA 1630



>EAY09413.1 on XP_820184   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1050

 Score = 25.8 bits (55), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 222 GRRMYFQGPATKFSRKYTNNR-YLAIFNDGLLVLESYMVINWKPNKFYK 269
           G RM        F   YT+++ +LAI  D     +   ++ W PNK Y+
Sbjct: 588 GVRMNDTSSTVLFGLSYTHDKKWLAITEDADDPEDVDYIVKWDPNKTYQ 636



>EAY09413.1 on XP_001609041  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1318

 Score = 25.4 bits (54), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 13/30 (43%), Positives = 18/30 (60%)

Query: 293 KDKSFRCNLEDSKAKVEFLQGFEKMMKANN 322
           KD    C LE++K K+E L G   + KAN+
Sbjct: 738 KDAVENCGLEEAKNKLEELTGNGGLDKANS 767




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09414.1 PPIC-type PPIASE domain containing protein
[Trichomonas vaginalis G3]
         (154 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_828105  VSG  (Establishment)  [Trypanosoma brucei]                  27   0.38 
XP_814818   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   0.92 
XP_804722   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   1.8  
XP_820455   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   2.0  
XP_820456   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   2.0  
XP_811467   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   2.7  
XP_812068   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   3.2  
XP_813641   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   3.6  
XP_810777   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   5.1  
XP_819737   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   6.0  
XP_807454   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   7.0  

>EAY09414.1 on XP_828105  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 508

 Score = 27.3 bits (59), Expect = 0.38,   Method: Composition-based stats.
 Identities = 13/29 (44%), Positives = 16/29 (55%)

Query: 58  KHNQSEHPNPALKRTREEAQNIINEIHQI 86
           KHN S    P  KRT +E +N  N I Q+
Sbjct: 420 KHNGSNTTCPRDKRTYDEKENKCNPIKQV 448



>EAY09414.1 on XP_814818   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 836

 Score = 26.2 bits (56), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 11/76 (14%)

Query: 19  VYYYNSVTNESTWIRPVPF--PGDKNTAEWPPMVYV---LHILIKHNQSEHPNPALKRTR 73
           +Y + +  N S ++ PV     G+K  A    ++Y    LH+L +    EH   +L R  
Sbjct: 427 LYLWVTDNNRSFFVGPVGMGNAGEKEVAS--TLLYSDGKLHLLQRRGNGEHSVVSLSRLT 484

Query: 74  EEAQNIINEIHQILLT 89
           EE    + EI  +L T
Sbjct: 485 EE----LKEIESVLST 496



>EAY09414.1 on XP_804722   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 151

 Score = 24.6 bits (52), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 9/21 (42%), Positives = 11/21 (52%)

Query: 95  ESIAKDRSDCESAKFNGVLGW 115
           E+  KD  DC +  F GV  W
Sbjct: 80  EADCKDGGDCSNVSFTGVASW 100



>EAY09414.1 on XP_820455   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 769

 Score = 25.4 bits (54), Expect = 2.0,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 3/64 (4%)

Query: 19  VYYYNSVTNESTWIRPVPFPGDKNTAEWPPMVYV---LHILIKHNQSEHPNPALKRTREE 75
           +Y + +  N S ++ PV      N      ++Y    LH+L +   SEH   +L R  EE
Sbjct: 405 LYLWVTDNNRSFYVGPVATDAAGNWEFASSLMYSDGNLHLLQQRGSSEHSVISLSRLTEE 464

Query: 76  AQNI 79
              I
Sbjct: 465 LSAI 468



>EAY09414.1 on XP_820456   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 769

 Score = 25.4 bits (54), Expect = 2.0,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 3/64 (4%)

Query: 19  VYYYNSVTNESTWIRPVPFPGDKNTAEWPPMVYV---LHILIKHNQSEHPNPALKRTREE 75
           +Y + +  N S ++ PV      N      ++Y    LH+L +   SEH   +L R  EE
Sbjct: 405 LYLWVTDNNRSFYVGPVATDAAGNWEFASSLMYSDGNLHLLQQRGSSEHSVISLSRLTEE 464

Query: 76  AQNI 79
              I
Sbjct: 465 LSAI 468



>EAY09414.1 on XP_811467   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 300

 Score = 24.6 bits (52), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 9/21 (42%), Positives = 11/21 (52%)

Query: 95  ESIAKDRSDCESAKFNGVLGW 115
           E+  KD  DC  A F G+  W
Sbjct: 175 EAHCKDWGDCSDASFTGIASW 195



>EAY09414.1 on XP_812068   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 812

 Score = 24.6 bits (52), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 4/41 (9%)

Query: 53  LHILIKHNQSEHPNPALKRTREEAQNIINEIHQILLTDNKK 93
           LH+L +    EH   +L R  EE    + EI  +L T ++K
Sbjct: 446 LHLLQRRGSGEHSAISLSRMTEE----LKEIGSVLSTWSQK 482



>EAY09414.1 on XP_813641   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 873

 Score = 24.6 bits (52), Expect = 3.6,   Method: Composition-based stats.
 Identities = 11/30 (36%), Positives = 17/30 (56%)

Query: 89  TDNKKFESIAKDRSDCESAKFNGVLGWIAR 118
           TD +K E I     D ++A  NG LG +++
Sbjct: 815 TDRQKEEGIHAQNGDVKAAALNGSLGNVSQ 844



>EAY09414.1 on XP_810777   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 846

 Score = 23.9 bits (50), Expect = 5.1,   Method: Composition-based stats.
 Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 11/80 (13%)

Query: 19  VYYYNSVTNESTWIRPV--PFPGDKNTAEWPPMVYV---LHILIKHNQSEHPNPALKRTR 73
           +Y + +  N S ++ PV    PG +  A    ++Y    LH+L +    EH   +L R  
Sbjct: 426 LYLWVTDNNRSFFVGPVGKDNPGKEELAS--NLLYSDGKLHLLQRRGSGEHSAISLSRLT 483

Query: 74  EEAQNIINEIHQILLTDNKK 93
           EE    + EI  +L T ++K
Sbjct: 484 EE----LKEIESVLSTWSQK 499



>EAY09414.1 on XP_819737   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1112

 Score = 23.9 bits (50), Expect = 6.0,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 15/35 (42%)

Query: 14  DYPGQVYYYNSVTNESTWIRPVPFPGDKNTAEWPP 48
           D    V +  S T++  W+     PGD    EW P
Sbjct: 659 DTDSTVLFGLSYTHDKKWLAIPENPGDPEDFEWEP 693



>EAY09414.1 on XP_807454   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 825

 Score = 23.5 bits (49), Expect = 7.0,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 8/67 (11%)

Query: 19  VYYYNSVTNESTWIRPVPFPGDKNTAEWPPMVYVLH------ILIKHNQSEHPNPALKRT 72
           +Y + +  N S ++ PV    D   A+W     +LH      +L +    EH   +L R 
Sbjct: 425 LYLWVTDNNRSFFVGPVGM--DDAAADWELASSLLHSDGNLHLLQRRGSGEHSAISLSRL 482

Query: 73  REEAQNI 79
            EE   I
Sbjct: 483 TEELSTI 489




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09420.1 DJ-1 family protein [Trichomonas vaginalis
G3]
         (187 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609565  variant erythrocyte surface antigen-1, alpha subun...    25   3.7  
XP_001608665  variant erythrocyte surface antigen-1, alpha subun...    25   4.3  

>EAY09420.1 on XP_001609565  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1341

 Score = 25.0 bits (53), Expect = 3.7,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 18/37 (48%)

Query: 127 PGCDNAIAETGGELTTDAVTRDGNVITSRGPGTSQQF 163
           PGC +   + G + T    T+ GN+ T+  P   Q F
Sbjct: 868 PGCKDHAKKCGQKGTATMCTQCGNMTTTGVPSPLQAF 904



>EAY09420.1 on XP_001608665  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1326

 Score = 24.6 bits (52), Expect = 4.3,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 72  GGMPGTKNLAANHDVVEFIKRHDKAGKLVGAIC 104
           G +PG KN+    D     +RH  A  L+G++C
Sbjct: 290 GILPGDKNIIGLLDGTASNRRHHCARILLGSVC 322




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09422.1 hypothetical protein TVAG_420440 [Trichomonas
vaginalis G3]
         (1589 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001350410  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   8.2  

>EAY09422.1 on XP_001350410  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2178

 Score = 27.3 bits (59), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 6/67 (8%)

Query: 1461 RADRLSSPPSPRQKSARQPSPRQGSP-----INSDYDDEDDEMTIVERQFLENKELKKEN 1515
            + +    PP+        PSP  G+      I+SD  +EDD+++ V+ +  E+  ++  +
Sbjct: 743  KCEETQKPPTDGAPGGAGPSPDTGTDDNLEDIDSD-GEEDDDVSHVDEEEPEDNPVEGSS 801

Query: 1516 EDLKQKI 1522
            E+ KQ++
Sbjct: 802  EEEKQEV 808




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09423.1 hypothetical protein TVAG_420450 [Trichomonas
vaginalis G3]
         (183 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001349512  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   0.95 
XP_001351318  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   1.1  
XP_001349740  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   7.4  

>EAY09423.1 on XP_001349512  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2980

 Score = 26.6 bits (57), Expect = 0.95,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 6/58 (10%)

Query: 65   YNGMKLDNKLKKFVGDCAFMDCVKQDSDVAMEHRVKLWRRIK----QKYPNLDLPESL 118
            YN  K++ KL + + D     C+K   +  ++++ + W++IK    Q+Y N + P+ L
Sbjct: 2301 YN--KINKKLNRCMKDGEGYQCIKDCVEKWIQNKREEWKKIKELYLQEYKNNNQPDYL 2356



>EAY09423.1 on XP_001351318  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2169

 Score = 26.6 bits (57), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 4/42 (9%)

Query: 72   NKLKKFVGDCAFMD----CVKQDSDVAMEHRVKLWRRIKQKY 109
            NK+KK +  C        C+K+  D  +  + K W+ IK++Y
Sbjct: 1484 NKIKKKLKSCTEKGEGSPCIKECVDTWITEKRKEWKTIKERY 1525



>EAY09423.1 on XP_001349740  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3346

 Score = 23.9 bits (50), Expect = 7.4,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 12/53 (22%)

Query: 72   NKLKKFVGDCAFMDCVKQDS------------DVAMEHRVKLWRRIKQKYPNL 112
            ++L+K   DC    C+K DS            +  +E   + W +IK+KY  L
Sbjct: 2579 SELRKGCEDCRSWKCMKGDSKCENCTKACKDYNSKIEPWKQQWTKIKEKYEEL 2631




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09424.1 hypothetical protein TVAG_420460 [Trichomonas
vaginalis G3]
         (546 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_804506   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   0.98 

>EAY09424.1 on XP_804506   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1012

 Score = 28.9 bits (63), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 9/35 (25%), Positives = 17/35 (48%)

Query: 235 GHLFCFCFFNFEVAFQIMCWRSWLKYIRRRRAWKR 269
           GH+ C C     + F +  +  W++++R  R   R
Sbjct: 134 GHVDCECLLTASIHFSLPAFTCWVRFLREGRCSPR 168




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09426.1 hypothetical protein TVAG_420480 [Trichomonas
vaginalis G3]
         (289 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_820458   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   2.7  
XP_808495   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   4.3  
XP_812068   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   6.1  

>EAY09426.1 on XP_820458   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 923

 Score = 26.2 bits (56), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 4/60 (6%)

Query: 6   SCFKGNQIVTLLARVLMSKLGMNFSLDEWNNARLEGDVQTHLENAKTL----GTDLSKAS 61
           +  KGN I  L+ +   +  G N   D+W    L G+V       K +     TD+ +AS
Sbjct: 171 TVVKGNDIYMLVGKYSQTAAGENRGADDWGLLLLRGNVSDGSGGEKRIHWKDTTDVPRAS 230



>EAY09426.1 on XP_808495   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 753

 Score = 25.4 bits (54), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 2/64 (3%)

Query: 153 NDSKNEAYVFENGSQVECTPDDTLQKHLVQYKTNANLKVILLSDCCHSGTIWDLNKSDSP 212
           ++ K + ++   GS V    D TL   L+    N+++  +++     +G+ W L+K  SP
Sbjct: 258 HEGKLKEFLAAGGSGV-LMEDGTLVFPLMAKSGNSDIYSMIIY-STDNGSTWALSKGFSP 315

Query: 213 QNCI 216
            NC+
Sbjct: 316 ANCL 319



>EAY09426.1 on XP_812068   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 812

 Score = 25.0 bits (53), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 16/54 (29%), Positives = 21/54 (38%)

Query: 162 FENGSQVECTPDDTLQKHLVQYKTNANLKVILLSDCCHSGTIWDLNKSDSPQNC 215
           F +G       D TL   LV  K N N     +    + G  W L++  SP  C
Sbjct: 265 FPSGGSGVLMEDGTLVFSLVAMKENPNEAFYTIVYSKNGGENWSLSEGMSPPKC 318




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09428.1 Carbamate kinase, putative [Trichomonas
vaginalis G3]
         (119 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_966305  PfEMP1  (Establishment)  [Plasmodium falciparum]            23   5.7  

>EAY09428.1 on XP_966305  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3954

 Score = 23.1 bits (48), Expect = 5.7,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 12/59 (20%)

Query: 15   RGMKGTFQDQQAACR----LAMSQIVKIVKDGNELVMTHGNGPQCGAIFLQNVAGEKEK 69
            R M  TF D +  C      A    +KIVK+  + V    NGP        +  G+KEK
Sbjct: 1429 RSMIYTFGDYRDLCLNTDISAKKDPIKIVKNNIQKVFNRNNGP--------HKEGDKEK 1479




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09429.1 Carbamate kinase, putative [Trichomonas
vaginalis G3]
         (165 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09439.1 hypothetical protein TVAG_125990 [Trichomonas
vaginalis G3]
         (363 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351564  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   1.9  
XP_001611365  variant erythrocyte surface antigen-1, alpha subun...    27   2.9  
AAK94670   SUB1  (Protease)  [Toxoplasma gondii]                       25   6.0  

>EAY09439.1 on XP_001351564  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2207

 Score = 26.9 bits (58), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 13/92 (14%)

Query: 226  HEDVYMLPNLNPKLDNINSIIDEQSAEHDKMLF----EVESKLMSYENRIKSLEDESSEI 281
            HED   LP+L        S   +  + + K +     E E +  +YE + K+ E ES E 
Sbjct: 1269 HEDPTTLPDLG-------SSCPKSCSSYRKWIKIKKDEYEKQQKAYEQQKKNCEKES-EG 1320

Query: 282  LQSLSSIADKTAEQQ-KSLNSLDSLIEEITKS 312
            +++ S I D+   Q  K+  S+DS ++ + K 
Sbjct: 1321 VENKSDICDQKFLQNLKNYGSIDSFLDRLKKG 1352



>EAY09439.1 on XP_001611365  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1335

 Score = 26.6 bits (57), Expect = 2.9,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 30/55 (54%), Gaps = 2/55 (3%)

Query: 31  ENELNRISPKIIELTNLIDKLFSQIPSNISDEFEEMKTQIELAKKRGKYTDEREY 85
           +NE+++   K+ E+   ++K   ++  NI DE E+ ++ ++     G+   E+ +
Sbjct: 783 KNEVSKAIHKVWEVLKEMEKQLKEVLKNIKDEIEQYESDMD--DNTGRIIQEKTF 835



>EAY09439.1 on AAK94670   SUB1  (Protease)  [Toxoplasma gondii]
          Length = 255

 Score = 25.0 bits (53), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 32/129 (24%), Positives = 64/129 (49%), Gaps = 10/129 (7%)

Query: 46  NLIDKLFSQIPSNISDEFEEMKTQIELAKKRGKYTDE--REYIDSERLRTKGKFE-ISVA 102
           NLI K   ++ + I DE E +     L +   KY D+  R+ +  E  +  G  E I VA
Sbjct: 53  NLI-KEIRKVEAEIEDEVETLNRDRRLHRGHNKYADDDIRQGLKDE--QDMGASENIPVA 109

Query: 103 -LEKENIEKDVEFRLNQVIYDAQQKSLEIPENKDANRYNSMKQQIAQYIL-QINSKINNL 160
            LE ++++++ ++ +  +I D +    +  E K +    ++   +AQ ++ ++N  ++  
Sbjct: 110 ELEPQDLDREAKYPVRMLIVDKRSDDDDDEETKTSFVETALHSDLAQRVVKELNGHVD-- 167

Query: 161 ELKMSGTTL 169
            L+ SG  L
Sbjct: 168 VLRESGVVL 176




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09441.1 hypothetical protein TVAG_126010 [Trichomonas
vaginalis G3]
         (2151 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CAA05261  PfSUB1  (Proteases)  [Plasmodium falciparum]                 30   2.5  
XP_954175  TashAT3  (Establishment)  [Theileria annulata]              28   9.4  
XP_813237   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   9.6  

>EAY09441.1 on CAA05261  PfSUB1  (Proteases)  [Plasmodium falciparum]
          Length = 689

 Score = 29.6 bits (65), Expect = 2.5,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 5/84 (5%)

Query: 356 YYTAATNHVPQENSVTNTNTSNLDYLKCKYSSELPFVY----TVLNTASNFLNKNFSLGM 411
           ++ +A+N    ++S  +    +L  +  KY   L  VY    +V N   N  N ++SL +
Sbjct: 515 FFVSASNCSHPKSSTPDIRKCDLS-INAKYPPILSTVYDNVISVANLKKNDNNNHYSLSI 573

Query: 412 NENYSQQFNDLIAELTKKINSVPQ 435
           N  YS ++  L A  T   ++ P 
Sbjct: 574 NSFYSNKYCQLAAPGTNIYSTAPH 597



>EAY09441.1 on XP_954175  TashAT3  (Establishment)  [Theileria annulata]
          Length = 994

 Score = 27.7 bits (60), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 63/158 (39%), Gaps = 20/158 (12%)

Query: 1119 KMKEPEMPTRKQPDLPPFSPPLPEFPKSQEMQMPLPPPLPEVPKSQQLQMPLPPPLPEP- 1177
            K ++PE+P R+ P  P    P PE PK +  +     P  +  ++++  +  P  +    
Sbjct: 330  KHEQPEVPKRR-PGRPRKQKPEPEQPKRKRGR-----PRKQKYETKKTWLLRPRNMKTET 383

Query: 1178 -------PKEMPPPPPIPELSKEMLPPPPLTPVREIPKQEELLPMPVPVEIQTQPLIHKR 1230
                   P++  P P  P+  +      P     E  K   L P  +  E +   L+  R
Sbjct: 384  KKTWLLRPRKQKPEPEQPKRKR----GRPRKQKYETKKTWLLRPRNMKTETKKTWLLRPR 439

Query: 1231 KHPPPPPANQPPPPRGPPPRKHSMPLQPVIEKSPPPPP 1268
            KH P P   QP   RG P ++   P     E+S  P P
Sbjct: 440  KHKPEP--EQPKRKRGRPRKQKPEPESDHSEESTQPHP 475



>EAY09441.1 on XP_813237   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1496

 Score = 27.7 bits (60), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 37/88 (42%), Positives = 41/88 (46%), Gaps = 11/88 (12%)

Query: 1748 VEQEPVNPSPVRTIPEIPQMPESPPQSPKPIEEPPKPVEEPPKPVEEPPKMIGPPPINIV 1807
             E +P  P P    P  P+  E  P  PKP E  PKPVE  PKP E  PK   P P    
Sbjct: 1138 AEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAE--PKPVE--PKPAE--PKPAEPKPAEPK 1191

Query: 1808 MKQPVSNLQVGAPEPKE-KPEAPKPAAP 1834
              +P S      P+P E KP  PKPA P
Sbjct: 1192 PAEPKS----AEPKPAEPKPAEPKPAEP 1215




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09446.1 hypothetical protein TVAG_126070 [Trichomonas
vaginalis G3]
         (106 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]                 27   0.19 
ABA06450  MSA-2a1  (Invasion)  [Babesia bovis]                         23   6.2  
AAL15421  MSA-2a1  (Invasion)  [Babesia bovis]                         23   6.2  

>EAY09446.1 on XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]
          Length = 2112

 Score = 27.3 bits (59), Expect = 0.19,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 9/49 (18%)

Query: 49  PLELPEGYTQKIVKIEDGHIKDFKEVSKVTMWDLNKPQLDKAADFFDLV 97
           P+E PE      + +ED + KDF +++ V         LD++A   DL+
Sbjct: 544 PVEKPEPEKNPCINMEDCYCKDFYDITLV---------LDESASISDLI 583



>EAY09446.1 on ABA06450  MSA-2a1  (Invasion)  [Babesia bovis]
          Length = 316

 Score = 22.7 bits (47), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 9/21 (42%), Positives = 14/21 (66%)

Query: 56  YTQKIVKIEDGHIKDFKEVSK 76
           Y +K +  EDG +KD+K + K
Sbjct: 151 YYKKNISKEDGEVKDYKTMVK 171



>EAY09446.1 on AAL15421  MSA-2a1  (Invasion)  [Babesia bovis]
          Length = 316

 Score = 22.7 bits (47), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 9/21 (42%), Positives = 14/21 (66%)

Query: 56  YTQKIVKIEDGHIKDFKEVSK 76
           Y +K +  EDG +KD+K + K
Sbjct: 151 YYKKNISKEDGEVKDYKTMVK 171




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09458.1 hypothetical protein TVAG_126190 [Trichomonas
vaginalis G3]
         (605 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_821137   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   2.0  
P13403  GRA1  (Establishment)  [Toxoplasma gondii]                     26   4.0  
XP_820382   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   4.2  

>EAY09458.1 on XP_821137   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 956

 Score = 28.1 bits (61), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 3/63 (4%)

Query: 513 NAIDTMRQERTIFEFSHNHKEALSAIIPNAKLVDGCA-FSFHCQDKKDLAKKVVEMLAND 571
           N +DT + E+T+    H+ K+  S   P     DGC+  S     +KD  KK++ M A D
Sbjct: 280 NQVDTEKDEKTVSLIIHSLKDTNSWKRPKGMSADGCSDPSIVEWGEKD--KKLMMMTACD 337

Query: 572 HNK 574
             +
Sbjct: 338 DGR 340



>EAY09458.1 on P13403  GRA1  (Establishment)  [Toxoplasma gondii]
          Length = 190

 Score = 26.2 bits (56), Expect = 4.0,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 18/29 (62%)

Query: 208 DGQFFHIANVNFNDIHDLIKTLFQNEDFL 236
           DG +  + NVN  ++ D +K++ ++ED  
Sbjct: 88  DGSYSEVGNVNVEEVIDTMKSMQRDEDIF 116



>EAY09458.1 on XP_820382   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 729

 Score = 26.9 bits (58), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 12/30 (40%), Positives = 19/30 (63%)

Query: 105 LYRYGGVSILLRKNGGAAYAILLAQINDEL 134
           LY  G + +L R+  G   AILL+++ +EL
Sbjct: 438 LYSDGKLHLLQRRGNGEGSAILLSRLTEEL 467




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09459.1 hypothetical protein TVAG_126200 [Trichomonas
vaginalis G3]
         (405 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_809489   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   7.6  

>EAY09459.1 on XP_809489   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 787

 Score = 25.4 bits (54), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 16/84 (19%)

Query: 309 LYCRIATIAWIQGIKINQQTIKFLSISEPQTDLGLIMARKYKKEYDVVLQNWAQKNSWIY 368
           LYC     A   G K N   I FL ++E   D+        KK    VL  W +K+++I 
Sbjct: 171 LYCSYEVAAAEDG-KYN---IAFLDLTEKLEDV--------KK----VLAAWKEKDAYIV 214

Query: 369 IDYLTRIKASGLEVPAFTTKPDLT 392
            +Y   ++++G +   F    DLT
Sbjct: 215 KEYGCTVESNGKKRREFGVVGDLT 238




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09460.1 hypothetical protein TVAG_126210 [Trichomonas
vaginalis G3]
         (217 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001610714  variant erythrocyte surface antigen-1, alpha subun...    28   0.43 
XP_001611147  variant erythrocyte surface antigen-1, alpha subun...    27   1.1  
XP_001610721  variant erythrocyte surface antigen-1, alpha subun...    26   1.8  

>EAY09460.1 on XP_001610714  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1231

 Score = 28.1 bits (61), Expect = 0.43,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 4/74 (5%)

Query: 5   GKMKKSIEKIRNRIKKLNNQLTIETEKVNLGEEAVEQLGQQVREIKNQNGVLQSDYDAKV 64
           GK KK+I+ ++  ++K    L     K+   ++A+E+L           G+L++  DA  
Sbjct: 623 GKEKKAIQGVKRELEKAKGALDTAKGKLEKAKKALEKLTTN----GGGGGILKNVVDAIG 678

Query: 65  KEYEDNRKIEQSKN 78
           K   D   ++  KN
Sbjct: 679 KAQSDVTNVDPGKN 692



>EAY09460.1 on XP_001611147  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1304

 Score = 26.9 bits (58), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 29/56 (51%)

Query: 35   GEEAVEQLGQQVREIKNQNGVLQSDYDAKVKEYEDNRKIEQSKNDKILADKNLELY 90
            G + ++++G+ +R+IK + G   + Y +   +  +      +KN + L+    ELY
Sbjct: 1020 GGQYMDKVGKALRDIKGEKGSTSTPYSSAAPQSSNTSLSRLTKNCQYLSPLTGELY 1075



>EAY09460.1 on XP_001610721  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1331

 Score = 26.2 bits (56), Expect = 1.8,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 29/52 (55%), Gaps = 2/52 (3%)

Query: 2   SASGKMKKSIEKIRNRIKKLNNQLTIETE--KVNLGEEAVEQLGQQVREIKN 51
           SA  ++ ++I K+R+ ++ L N+L  +    K  L + A  +  Q + +IK+
Sbjct: 790 SAKDRISEAISKVRDALEALKNELKDKNSMLKGGLADWATAKFQQAIDQIKD 841




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09463.1 CAMK family protein kinase [Trichomonas
vaginalis G3]
         (429 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    57   6e-10
XP_802520   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   0.63 
XP_818196   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.77 
XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 26   6.7  

>EAY09463.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 57.0 bits (136), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 87/197 (44%), Gaps = 50/197 (25%)

Query: 124 IYSVLYYLHKVVK---------ISHRDLKAENVLLDQNYNI-RIIDFGLSTTFVDENTEF 173
           I  + YY+++++K         I HRD+K  NV++D    I R+ID+GL+  F     E+
Sbjct: 146 IQDIKYYIYQLLKAMNYCHSQGIMHRDIKPHNVMIDHEKKILRLIDWGLA-EFYHPEQEY 204

Query: 174 FTRCGSQYYMAPEIFKN-EPYKLGSDIWSLGVLLYLMAVGKLPF----KDTDSQGTMNKI 228
             R  ++YY  PE+  +   Y    DIWS+G +L  +   K PF     + D    + K+
Sbjct: 205 SVRVATRYYKGPELLVDMRYYDYSLDIWSIGCMLAGIIFKKEPFFYGHDNYDQLVKIAKV 264

Query: 229 LFSNPIY------------------------PPT----------MTQSLQDLLNRMMTKN 254
           L +  ++                        P T          ++  + DLL+RM+  +
Sbjct: 265 LGTEDLHRYFEKYGLKFAPAYQEILGNHSKKPWTKFVHHENQHLVSPEVMDLLDRMLVYD 324

Query: 255 PNERISCDDISTHPWFS 271
             +RI+  +   HP+F+
Sbjct: 325 HTKRITPLEAMEHPFFN 341



>EAY09463.1 on XP_802520   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 610

 Score = 28.9 bits (63), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 17/74 (22%), Positives = 37/74 (50%), Gaps = 11/74 (14%)

Query: 275 YTYTMIITEQWKDFDINLSVIPKMEQ----MGISIDNIRQNITLKVFNESTAIYRILCRN 330
           Y +T++ T       +++   PK +     MG+ +D   +N  +++  +S   +R+LC +
Sbjct: 454 YNFTLVAT-------VSIHGEPKEDTPIPVMGVRLDGEGENKLMELSYDSEKKWRVLCSD 506

Query: 331 DYIEKLQRIPRSQT 344
             I+KL+    + T
Sbjct: 507 GKIKKLKSTWETWT 520



>EAY09463.1 on XP_818196   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 841

 Score = 28.5 bits (62), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 11/67 (16%)

Query: 275 YTYTMIITEQWKDFDINLSVIPKMEQ----MGISIDNIRQNITLKVFNESTAIYRILCRN 330
           Y +T++ T       +++   PK +     MG+ +D   +N  +++  +S   +R+LC +
Sbjct: 581 YKFTLVAT-------VSIHGEPKEDTPIPVMGVRLDGEGENKLMELSYDSEKKWRVLCSD 633

Query: 331 DYIEKLQ 337
             I+KL+
Sbjct: 634 GKIKKLK 640



>EAY09463.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 25.8 bits (55), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 23/106 (21%), Positives = 51/106 (48%), Gaps = 8/106 (7%)

Query: 21   ERIGRGGMASVWKAQHIPSKLFVAIKAIPKELIQNDKKQMRFIREVELMKQMDHPFIVQL 80
            ER+ R  +    + QHI SKL   +  I K+ +  +K ++   ++++L   ++  ++  L
Sbjct: 2859 ERLERKKIELAEREQHIKSKLESDMVKIIKDELTKEKDEIIKNKDIKLRHSLEQKWLKHL 2918

Query: 81   YQTLEDENYHYLVMEYLPNGNLDDYIQE-KGPIPEGMMGRIFAQIY 125
               L       L ++ L N N D+ I++ +  +   ++  +  Q+Y
Sbjct: 2919 QNILS------LKIDSLLNKN-DEVIKDNETQLKTNILNSLKNQLY 2957




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09485.1 WW domain containing protein [Trichomonas
vaginalis G3]
         (150 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_802557   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   2.0  
XP_001351079  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   6.4  
XP_001351513  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   9.1  

>EAY09485.1 on XP_802557   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 608

 Score = 25.0 bits (53), Expect = 2.0,   Method: Composition-based stats.
 Identities = 9/17 (52%), Positives = 10/17 (58%)

Query: 34  PIPYPGNKPNRANEWPP 50
           PIP PG +P    E PP
Sbjct: 556 PIPNPGEEPRSVPEIPP 572



>EAY09485.1 on XP_001351079  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2203

 Score = 23.9 bits (50), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 7/84 (8%)

Query: 20   YYYNKVTNETTWIRPIPYPGNKPNRANEWPPIIYVAQI-----YIKHGPMDESKEKIKRI 74
            Y+Y KVT E +   P    G+ P  + +  P+    +I     ++     D    + KR+
Sbjct: 1183 YHYEKVTLENSGPSPKLQTGS-PGTSGDNTPLTQFVKIPTFFRWLHEWGSDFCGTR-KRM 1240

Query: 75   FRQIVFENKSFEEMVQQESEQCPD 98
              +I+FE +   ++   + E C D
Sbjct: 1241 LDKIIFECRGNGKVCSGDGEDCKD 1264



>EAY09485.1 on XP_001351513  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2152

 Score = 23.1 bits (48), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 10/26 (38%), Positives = 12/26 (46%)

Query: 23  NKVTNETTWIRPIPYPGNKPNRANEW 48
           NK    T + +P P  G K N   EW
Sbjct: 495 NKTFCRTKYCQPCPLCGMKKNNNGEW 520




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09489.1 hypothetical protein TVAG_102380 [Trichomonas
vaginalis G3]
         (189 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAM45250  BAEBL/EBP2  (Adhesin)  [Plasmodium falciparum]               26   1.6  
AAL23761  BAEBL/EBP2  (Adhesin)  [Plasmodium falciparum]               26   1.6  
AAM45253  BAEBL/EBP2  (Adhesin)  [Plasmodium falciparum]               26   1.6  
AAM45255  BAEBL/EBP2  (Adhesin)  [Plasmodium falciparum]               26   1.6  
AAM45258  BAEBL/EBP2  (Adhesin)  [Plasmodium falciparum]               26   1.6  
AAK49521  BAEBL/EBP2  (Adhesin)  [Plasmodium falciparum]               25   2.5  
AAK31250  variable surface protein IVh  (Establishment)  [Giardi...    24   3.6  
AAB65410  AMA1  (Invasion)  [Toxoplasma gondii]                        25   4.0  

>EAY09489.1 on AAM45250  BAEBL/EBP2  (Adhesin)  [Plasmodium falciparum]
          Length = 616

 Score = 26.2 bits (56), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 18/86 (20%), Positives = 34/86 (39%), Gaps = 13/86 (15%)

Query: 16  NITRNYC-EYDAAFGISYSQFTRSIK----------YSNIDENYATYRICFVQSKPATCN 64
           N  +N C EY     +  S++ + +           Y NIDE        +++ K   C 
Sbjct: 516 NTCKNKCSEYKKWIDLKKSEYEKQVDKYTKDKNKKMYDNIDEVKNKEANVYLKEKSKECK 575

Query: 65  SIVFTNNIVSADDSDFPEMFNCVSCS 90
            + F + I +   +++ +M  C  C 
Sbjct: 576 DVNFDDKIFNESPNEYEDM--CKKCD 599



>EAY09489.1 on AAL23761  BAEBL/EBP2  (Adhesin)  [Plasmodium falciparum]
          Length = 616

 Score = 26.2 bits (56), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 18/86 (20%), Positives = 34/86 (39%), Gaps = 13/86 (15%)

Query: 16  NITRNYC-EYDAAFGISYSQFTRSIK----------YSNIDENYATYRICFVQSKPATCN 64
           N  +N C EY     +  S++ + +           Y NIDE        +++ K   C 
Sbjct: 516 NTCKNKCSEYKKWIDLKKSEYEKQVDKYTKDKNKKMYDNIDEVKNKEANVYLKEKSKECK 575

Query: 65  SIVFTNNIVSADDSDFPEMFNCVSCS 90
            + F + I +   +++ +M  C  C 
Sbjct: 576 DVNFDDKIFNESPNEYEDM--CKKCD 599



>EAY09489.1 on AAM45253  BAEBL/EBP2  (Adhesin)  [Plasmodium falciparum]
          Length = 616

 Score = 25.8 bits (55), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 18/86 (20%), Positives = 34/86 (39%), Gaps = 13/86 (15%)

Query: 16  NITRNYC-EYDAAFGISYSQFTRSIK----------YSNIDENYATYRICFVQSKPATCN 64
           N  +N C EY     +  S++ + +           Y NIDE        +++ K   C 
Sbjct: 516 NTCKNKCSEYKKWIDLKKSEYEKQVDKYTKDKNKKMYDNIDEVKNKEANVYLKEKSKECK 575

Query: 65  SIVFTNNIVSADDSDFPEMFNCVSCS 90
            + F + I +   +++ +M  C  C 
Sbjct: 576 DVNFDDKIFNESPNEYEDM--CKKCD 599



>EAY09489.1 on AAM45255  BAEBL/EBP2  (Adhesin)  [Plasmodium falciparum]
          Length = 616

 Score = 25.8 bits (55), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 18/86 (20%), Positives = 34/86 (39%), Gaps = 13/86 (15%)

Query: 16  NITRNYC-EYDAAFGISYSQFTRSIK----------YSNIDENYATYRICFVQSKPATCN 64
           N  +N C EY     +  S++ + +           Y NIDE        +++ K   C 
Sbjct: 516 NTCKNKCSEYKKWIDLKKSEYEKQVDKYTKDKNKKMYDNIDEVKNKEANVYLKEKSKECK 575

Query: 65  SIVFTNNIVSADDSDFPEMFNCVSCS 90
            + F + I +   +++ +M  C  C 
Sbjct: 576 DVNFDDKIFNESPNEYEDM--CKKCD 599



>EAY09489.1 on AAM45258  BAEBL/EBP2  (Adhesin)  [Plasmodium falciparum]
          Length = 616

 Score = 25.8 bits (55), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 18/86 (20%), Positives = 34/86 (39%), Gaps = 13/86 (15%)

Query: 16  NITRNYC-EYDAAFGISYSQFTRSIK----------YSNIDENYATYRICFVQSKPATCN 64
           N  +N C EY     +  S++ + +           Y NIDE        +++ K   C 
Sbjct: 516 NTCKNKCSEYKKWIDLKKSEYEKQVDKYTKDKNKKMYDNIDEVKNKEANVYLKEKSKECK 575

Query: 65  SIVFTNNIVSADDSDFPEMFNCVSCS 90
            + F + I +   +++ +M  C  C 
Sbjct: 576 DVNFDDKIFNESPNEYEDM--CKKCD 599



>EAY09489.1 on AAK49521  BAEBL/EBP2  (Adhesin)  [Plasmodium falciparum]
          Length = 1210

 Score = 25.4 bits (54), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 32/140 (22%), Positives = 51/140 (36%), Gaps = 30/140 (21%)

Query: 16  NITRNYC-EYDAAFGISYSQFTRSIK----------YSNIDENYATYRICFVQSKPATCN 64
           N  +N C EY     +  S++ + +           Y NIDE        +++ K   C 
Sbjct: 656 NTCKNKCSEYKKWIDLKKSEYEKQVDKYTKDKNKKMYDNIDEVKNKEANVYLKEKSKECK 715

Query: 65  SIVFTNNIVSADDSDFPEMFNCVSCSATFENCFIASNKQNDCYLFGIAGSGYTVTVSNSY 124
            + F + I +   +++ +M  C  C                 YL  I    Y  T  + Y
Sbjct: 716 DVNFDDKIFNESPNEYEDM--CKKCDEI-------------KYLNEIK---YPKTKHDIY 757

Query: 125 -IDTQEKLFPEGQQVSIGQN 143
            IDT    F +G  +SI  N
Sbjct: 758 DIDTFSDTFGDGTPISINAN 777



>EAY09489.1 on AAK31250  variable surface protein IVh  (Establishment)  [Giardia
           duodenalis]
          Length = 161

 Score = 24.3 bits (51), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 10/20 (50%), Positives = 13/20 (65%)

Query: 76  DDSDFPEMFNCVSCSATFEN 95
           DDS+   + NCVSC+A   N
Sbjct: 92  DDSNIKGVPNCVSCAAPASN 111



>EAY09489.1 on AAB65410  AMA1  (Invasion)  [Toxoplasma gondii]
          Length = 255

 Score = 24.6 bits (52), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)

Query: 135 GQQVSIGQNKDISVELHLHSIELCPT-GNNIE 165
           G  V +GQ+K++   L+     LCP  G +IE
Sbjct: 66  GIYVDLGQDKEVDGTLYREPAGLCPIWGKHIE 97




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09491.1 hypothetical protein TVAG_102400 [Trichomonas
vaginalis G3]
         (312 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_814443   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.6  
XP_820757   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.4  
AAL38218  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   26   2.9  

>EAY09491.1 on XP_814443   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 924

 Score = 26.9 bits (58), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 11/96 (11%)

Query: 105 NTDNND---VALTVQSRKDKKNRTKVRSSSIRLQIGNLQMLNSNYEKPASRLGNLRSSFI 161
           NTD+ND   +AL  + +KD K    + S  +  Q+  ++ + + +++   R+ NL +S I
Sbjct: 426 NTDDNDEKLIALYEKMKKDVKPSPGMVSVLLTEQLQRVKEVLTTWKEVDGRVSNLCTSLI 485

Query: 162 RLSEKQMKEEMNLASPRELCSSTSILRSPIVDVSAN 197
                    E + AS  + CS+  I    +  +S N
Sbjct: 486 A--------EKDRASTDDACSADKITAGLVGFLSGN 513



>EAY09491.1 on XP_820757   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 912

 Score = 26.6 bits (57), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 3/61 (4%)

Query: 180 LCSSTSILRSPIVDVSANNESLLSPL---SGDSDEMIPPVHQEPSENKKPRQRIVLQIPT 236
           L  +T I+    V V  ++E   S L   SGD++E+I    ++  E +KP   + +++  
Sbjct: 414 LTDNTHIVDIGPVSVEGDDEVAASSLLYKSGDNNELIALYEKKKGEGEKPSGMVSVRLTA 473

Query: 237 Q 237
           Q
Sbjct: 474 Q 474



>EAY09491.1 on AAL38218  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2977

 Score = 26.2 bits (56), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 2/61 (3%)

Query: 239  AAFGKAPERKLSRSNLKPEIHKARTGSLGSH--IRKSRASISSEFKASDVVIPEGNDVTR 296
            + + K   R ++   +K  I K       +H  I+K    I+ EF   DVVI +  D+ R
Sbjct: 1345 SNYIKTELRNINLQEIKNNIIKIFKEFESAHKEIKKESKQINKEFTKMDVVINQLRDIDR 1404

Query: 297  R 297
            +
Sbjct: 1405 Q 1405




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09493.1 hypothetical protein TVAG_102420 [Trichomonas
vaginalis G3]
         (237 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_804522   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   0.83 
XP_813615   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.4  
XP_815267   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   5.8  
XP_819719   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   8.0  

>EAY09493.1 on XP_804522   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 155

 Score = 26.6 bits (57), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 12/41 (29%), Positives = 21/41 (51%)

Query: 145 HSGSNCNKALFMRKDTVTVICGSDFFDVGSLSMILSIGINC 185
           HS +   K     +       GSD FD+ S++ ++S+G+ C
Sbjct: 89  HSSTTPGKTKVPSELNAAPALGSDPFDLESVTALVSVGLRC 129



>EAY09493.1 on XP_813615   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 706

 Score = 26.6 bits (57), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 13/90 (14%)

Query: 18  EGTRRFYDFLKICGVRRFIFISSGEWVHTNQLAVAVEGRPHFAHFGIPIQMLHDRITEFY 77
           E  ++++  L +      ++I       + Q  V  EG P  +HF I      +  TE  
Sbjct: 565 EVNKKYHVVLTMANKMGSVYIDGEPLAGSGQTVVPDEGTPDISHFYIGSYNSSNMPTE-- 622

Query: 78  NLSHIIPTRNVLL-NRQRGVQRSILNFDEI 106
             SH+  T+NV L NRQ       LN +EI
Sbjct: 623 --SHVT-TKNVFLYNRQ-------LNAEEI 642



>EAY09493.1 on XP_815267   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 718

 Score = 24.6 bits (52), Expect = 5.8,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 30/76 (39%), Gaps = 4/76 (5%)

Query: 18  EGTRRFYDFLKICGVRRFIFISSGEWVHTNQLAVAVEGRPHFAHFGIPIQMLHDRITEFY 77
           E  ++++  L +      ++I       + Q  V  EG P  +HF I      +  TE  
Sbjct: 565 EVNKKYHVVLTMANKMGSVYIDGEPLAGSGQTVVPNEGTPDISHFYIGSYNSSNMPTE-- 622

Query: 78  NLSHIIPTRNVLLNRQ 93
             SH+      L NRQ
Sbjct: 623 --SHVTAKNVFLYNRQ 636



>EAY09493.1 on XP_819719   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1053

 Score = 24.3 bits (51), Expect = 8.0,   Method: Composition-based stats.
 Identities = 8/20 (40%), Positives = 16/20 (80%)

Query: 164  ICGSDFFDVGSLSMILSIGI 183
            + G+D FDV +++ +LS+G+
Sbjct: 1005 LLGNDIFDVENITELLSVGV 1024




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09496.1 dnaK protein [Trichomonas vaginalis G3]
         (650 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAC72001   Hsp70  (Heat shock protein)  [Toxoplasma gondii]           154   6e-44
AAC72002  Hsp70  (Heat shock protein)  [Toxoplasma gondii]            154   6e-44
AAF75871  Hsp70  (Heat shock protein)  [Cryptosporidium parvum]       137   2e-37
CAA87086  Hsp70  (Heat shock protein)  [Eimeria tenella]              108   2e-27
XP_001611366  variant erythrocyte surface antigen-1, beta subuni...    29   1.1  
XP_001609619  variant erythrocyte surface antigen-1, beta subuni...    28   1.7  
XP_804895   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   1.8  
XP_821390   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   2.1  
XP_814246   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   3.5  
XP_820303   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   4.1  
XP_001608667  variant erythrocyte surface antigen-1, beta subuni...    27   4.2  
XP_001350410  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   5.0  
XP_818196   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   6.6  
XP_001611898  variant erythrocyte surface antigen-1, beta subuni...    26   7.1  
XP_811934   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   9.0  
XP_001349737  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   9.1  
XP_802520   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   9.3  
XP_001349514  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   9.8  

>EAY09496.1 on AAC72001   Hsp70  (Heat shock protein)  [Toxoplasma gondii]
          Length = 255

 Score =  154 bits (390), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 90/252 (35%), Positives = 146/252 (57%), Gaps = 7/252 (2%)

Query: 1   MNEEVYVGIDLGTTFCSVAVYRPSTQETEVLEIEGSKTIPSQVYY-GTPTYFGQKAKDQL 59
           M +   VGIDLGTT+  V V++    E  +   +G++T PS V +  T    G  AK+Q+
Sbjct: 1   MADSPAVGIDLGTTYSCVGVWKNDAVEI-IANDQGNRTTPSYVAFTDTERLVGDAAKNQV 59

Query: 60  QITPTLVAYDSKRMIGRTYDE--VKAQNMTWPFRIEGTSDNEVDIILENKGKTQVVSPVQ 117
              P    +D+KR+IGR +D+  V++    WPF++     ++  I +  +G+ +   P +
Sbjct: 60  ARNPENTIFDAKRLIGRKFDDPSVQSDMKHWPFKVIAGPGDKPLIEVTYQGEKKTFHPEE 119

Query: 118 VSAEILKYLKTHAEKIIGK-FDGAVITIPQAFSDAQRKATKNAAIIAGFDPNKIHFLPEP 176
           VSA +L  +K  AE  +GK    AVIT+P  F+D+QR+ATK+A  IAG   + +  + EP
Sbjct: 120 VSAMVLGKMKEIAEAYLGKEVKEAVITVPAYFNDSQRQATKDAGTIAGL--SVLRIINEP 177

Query: 177 TSAAIKFAHKASADHRHHILIYDFGGGTFDISRATINNRKIKINSTGGDSKLGGQDIDAA 236
           T+AAI +          ++LI+D GGGTFD+S  TI +   ++ +T GD+ LGG+D D  
Sbjct: 178 TAAAIAYGLDKKGCGEMNVLIFDMGGGTFDVSLLTIEDGIFEVKATAGDTHLGGEDFDNR 237

Query: 237 IVDYLAPEIEKQ 248
           +VD+   + +++
Sbjct: 238 LVDFCVQDFKRK 249



>EAY09496.1 on AAC72002  Hsp70  (Heat shock protein)  [Toxoplasma gondii]
          Length = 255

 Score =  154 bits (390), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 90/252 (35%), Positives = 146/252 (57%), Gaps = 7/252 (2%)

Query: 1   MNEEVYVGIDLGTTFCSVAVYRPSTQETEVLEIEGSKTIPSQVYY-GTPTYFGQKAKDQL 59
           M +   VGIDLGTT+  V V++    E  +   +G++T PS V +  T    G  AK+Q+
Sbjct: 1   MADSPAVGIDLGTTYSCVGVWKNDAVEI-IANDQGNRTTPSYVAFTDTERLVGDAAKNQV 59

Query: 60  QITPTLVAYDSKRMIGRTYDE--VKAQNMTWPFRIEGTSDNEVDIILENKGKTQVVSPVQ 117
              P    +D+KR+IGR +D+  V++    WPF++     ++  I +  +G+ +   P +
Sbjct: 60  ARNPENTIFDAKRLIGRKFDDPSVQSDMKHWPFKVIAGPGDKPLIEVTYQGEKKTFHPEE 119

Query: 118 VSAEILKYLKTHAEKIIGK-FDGAVITIPQAFSDAQRKATKNAAIIAGFDPNKIHFLPEP 176
           VSA +L  +K  AE  +GK    AVIT+P  F+D+QR+ATK+A  IAG   + +  + EP
Sbjct: 120 VSAMVLGKMKEIAEAYLGKEVKEAVITVPAYFNDSQRQATKDAGTIAGL--SVLRIINEP 177

Query: 177 TSAAIKFAHKASADHRHHILIYDFGGGTFDISRATINNRKIKINSTGGDSKLGGQDIDAA 236
           T+AAI +          ++LI+D GGGTFD+S  TI +   ++ +T GD+ LGG+D D  
Sbjct: 178 TAAAIAYGLDKKGCGEMNVLIFDMGGGTFDVSLLTIEDGIFEVKATAGDTHLGGEDFDNR 237

Query: 237 IVDYLAPEIEKQ 248
           +VD+   + +++
Sbjct: 238 LVDFCVQDFKRK 249



>EAY09496.1 on AAF75871  Hsp70  (Heat shock protein)  [Cryptosporidium parvum]
          Length = 255

 Score =  137 bits (344), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 83/250 (33%), Positives = 140/250 (56%), Gaps = 11/250 (4%)

Query: 34  EGSKTIPSQVYYG-TPTYFGQKAKDQLQITPTLVAYDSKRMIGRTYDEVKAQ-NMT-WPF 90
           +G++T PS V +  T    G  AK+Q+   P    +D+KR+IGR +D+   Q +MT WPF
Sbjct: 11  QGNRTTPSYVAFTETERLIGDAAKNQVARNPENTVFDAKRLIGRKFDDQAVQSDMTHWPF 70

Query: 91  RI-EGTSDNEVDIILENKGKTQVVSPVQVSAEILKYLKTHAEKIIGK-FDGAVITIPQAF 148
           ++  G  D  + I +   G+ +     ++SA +L+ +K  +E  +G+    AV+T+P  F
Sbjct: 71  KVVRGPKDKPI-ISVNYLGEKKEFHAEEISAMVLQKMKEISEAYLGRQIKNAVVTVPAYF 129

Query: 149 SDAQRKATKNAAIIAGFDPNKIHFLPEPTSAAIKFAHKASADHRHHILIYDFGGGTFDIS 208
           +D+QR+ATK+A  IAG   N +  + EPT+AAI +          ++LI+D GGGTFD+S
Sbjct: 130 NDSQRQATKDAGAIAGL--NVMRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVS 187

Query: 209 RATINNRKIKINSTGGDSKLGGQDIDAAIVDYLAPEIE-KQVGIKIKEKGQERMYNLVKA 267
             TI +   ++ +T GD+ LGG+D D  +V++   + + K  G+ +      R    ++ 
Sbjct: 188 LLTIEDGIFEVKATAGDTHLGGEDFDNRLVEFCVQDFKRKNRGMDLTSNA--RALRRLRT 245

Query: 268 EAEEVKKKFS 277
           + E  K+  S
Sbjct: 246 QCERAKRTLS 255



>EAY09496.1 on CAA87086  Hsp70  (Heat shock protein)  [Eimeria tenella]
          Length = 255

 Score =  108 bits (269), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/209 (39%), Positives = 118/209 (56%), Gaps = 22/209 (10%)

Query: 7   VGIDLGTTFCSVAVYRPSTQETEVLE-IEGSKTIPSQVYYGTPTYFGQK-----AKDQLQ 60
           VGIDLGTT   VAV   S  + +VLE  EG +T PS V +   T  GQ+     AK Q  
Sbjct: 60  VGIDLGTTNSCVAVMEGS--QPKVLENSEGMRTTPSVVAF---TKDGQRLVGVVAKRQAI 114

Query: 61  ITPTLVAYDSKRMIGRTYDE--VKAQNMTWPFRIEGTSDNEVDIILENKGKTQVVSPVQV 118
             P    + +KR+IGR++DE  +  +    P+++   +DN  D  +E  GK    SP Q+
Sbjct: 115 TNPENTFFSTKRLIGRSFDEEAIAKERKILPYKVI-RADNG-DAWVEGWGKK--YSPSQI 170

Query: 119 SAEILKYLKTHAEKIIGK-FDGAVITIPQAFSDAQRKATKNAAIIAGFDPNKIHFLPEPT 177
            A +L  +K  AE  +G+  + AVIT+P  F+D+QR+ATK+A  IAG D   +  + EPT
Sbjct: 171 GAFVLMKMKETAESYLGRDVNQAVITVPAYFNDSQRQATKDAGKIAGLD--VLRIINEPT 228

Query: 178 SAAIKFAHKASADHRHHILIYDFGGGTFD 206
           +AA+  A+    +    I +YD GGGTFD
Sbjct: 229 AAAL--AYGMEKEDGRTIAVYDLGGGTFD 255



>EAY09496.1 on XP_001611366  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 1173

 Score = 28.9 bits (63), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 2/50 (4%)

Query: 225 DSKLGGQDIDAAIVDYLAPEIEKQVGIKIKEKGQERMYNLVKAEAEEVKK 274
           D+  GG ++  A++D+LA  ++K VG   +EKG E        +++ + K
Sbjct: 110 DTCAGGTEVIKALIDHLAQGLQKWVG--WQEKGDECCLKGTSGKSKGIGK 157



>EAY09496.1 on XP_001609619  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 1086

 Score = 28.1 bits (61), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 4/56 (7%)

Query: 206 DISRATINNRKIKINSTGGDSKL--GGQDIDAAIVDYLAPEIEKQVGIKIKEKGQE 259
           DI +  + +  +   STG  S    GG ++  A++D LA  ++K VG   ++KG E
Sbjct: 88  DIVKPVLTDLGLLGGSTGAASSTCAGGTEVIGALIDQLAQGLQKWVG--WQDKGDE 141



>EAY09496.1 on XP_804895   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 787

 Score = 28.1 bits (61), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 1/31 (3%)

Query: 401 FSQPLITPREIEEIEERKPVERVISQPILAD 431
           +++PL  P E+  I++RKPV + +S+P   D
Sbjct: 678 YNRPL-NPTEMAAIKDRKPVPKRVSEPQAGD 707



>EAY09496.1 on XP_821390   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 940

 Score = 28.1 bits (61), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 13/36 (36%), Positives = 20/36 (55%)

Query: 358 DISRLTAVAEGAAYYHYINKNHKKKVVKKPPNSNRL 393
           D+SR TAVAEG   Y  + K+  + V +    S ++
Sbjct: 162 DVSRPTAVAEGGKIYMLVGKHSHEDVAECKATSEKI 197



>EAY09496.1 on XP_814246   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1002

 Score = 27.3 bits (59), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 14/52 (26%), Positives = 26/52 (50%)

Query: 122 ILKYLKTHAEKIIGKFDGAVITIPQAFSDAQRKATKNAAIIAGFDPNKIHFL 173
           +L    TH +K +  F+G+ +T+P    D + +A K   ++   D N   F+
Sbjct: 567 LLGLSYTHDKKWMVTFNGSHLTLPAHDDDVEWEANKKYHVVLQMDYNNGLFV 618



>EAY09496.1 on XP_820303   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 873

 Score = 26.9 bits (58), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 358 DISRLTAVAEGAAYYHYINKNHKKKVVKKPPNS 390
           D+SR T V EG   Y  + K  +  VV  P N 
Sbjct: 163 DVSRPTTVVEGNDIYMLVGKYSQTAVVGPPKNG 195



>EAY09496.1 on XP_001608667  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 1139

 Score = 26.9 bits (58), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 4/51 (7%)

Query: 225 DSKLGGQDIDAAIVDYLAPEIEKQVGIKIKE----KGQERMYNLVKAEAEE 271
           D+  GG ++  A++D+LA  ++K VG K  +    KG E +    K  A  
Sbjct: 115 DTCAGGTEVIKALIDHLALGLQKWVGWKEGDTCCLKGTEGIGGQCKCTASS 165



>EAY09496.1 on XP_001350410  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2178

 Score = 26.9 bits (58), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 54/128 (42%), Gaps = 25/128 (19%)

Query: 503 DIP---PNSPKGSIT---FEFTISVDNNNL-----IECHYKRTDESGDSEYFL------I 545
           DIP   P++ K +I      F  S D+NN       +CHY  + +SG ++  +       
Sbjct: 527 DIPILTPDTTKSNIVEKYRNFCNSSDDNNSDQINNWQCHYDESKKSGQNDNCVEGTWQNF 586

Query: 546 DKDRSADRYAV-------EIAKRKIREKEERERIIFDFEKLV-ETVLNTTQKLKKKFQTN 597
            KD+    Y         E+    I+ + E ++ + + +K   +   N   K  KK+   
Sbjct: 587 KKDQKVTSYNAFFWKWVSEMLDDSIKWRAELDKCLKNDKKTCGKKKCNRDCKCFKKWVEQ 646

Query: 598 KKSAEWKA 605
           KK  EWKA
Sbjct: 647 KKEKEWKA 654



>EAY09496.1 on XP_818196   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 841

 Score = 26.2 bits (56), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 16/40 (40%), Positives = 21/40 (52%)

Query: 71  KRMIGRTYDEVKAQNMTWPFRIEGTSDNEVDIILENKGKT 110
           KR++G     VK ++ T  F IEGT   + D   E  GKT
Sbjct: 250 KRLVGSGGSGVKMKDGTLVFPIEGTKKEKKDDGTEKDGKT 289



>EAY09496.1 on XP_001611898  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 1214

 Score = 26.2 bits (56), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)

Query: 225 DSKLGGQDIDAAIVDYLAPEIEKQVGIKIKEKGQE 259
           D+  GG ++   ++D LA  ++K VG   +EKG E
Sbjct: 109 DTCAGGTEVVGTLIDQLAQGLQKWVG--WQEKGDE 141



>EAY09496.1 on XP_811934   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 870

 Score = 25.8 bits (55), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query: 358 DISRLTAVAEGAAYYHYINKNHKKKVV 384
           D+SR T + +G+  Y  + KN +K  V
Sbjct: 160 DVSRPTTIVKGSDIYMLVGKNSRKDAV 186



>EAY09496.1 on XP_001349737  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2199

 Score = 25.8 bits (55), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)

Query: 435  IIEILSSSIGIADGNDNIIKILKKGEKLPCSGTQKFKNFCNGDAIGINIYEGEDSKAEKC 494
             +E     I + +  DN+IK+ K G    CS +    N    DAI   I + E  K ++C
Sbjct: 1597 FLETWIPKIAVVNDQDNVIKLSKFGNSCGCSASAISTNGNEEDAIDCMIKKLE-KKIDEC 1655

Query: 495  KK 496
            K+
Sbjct: 1656 KR 1657



>EAY09496.1 on XP_802520   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 610

 Score = 25.8 bits (55), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 16/40 (40%), Positives = 21/40 (52%)

Query: 71  KRMIGRTYDEVKAQNMTWPFRIEGTSDNEVDIILENKGKT 110
           KR++G     VK ++ T  F IEGT   + D   E  GKT
Sbjct: 121 KRLVGSGGSGVKMKDGTLVFPIEGTKKEKKDDGTEKDGKT 160



>EAY09496.1 on XP_001349514  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2120

 Score = 25.8 bits (55), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 32/140 (22%), Positives = 55/140 (39%), Gaps = 27/140 (19%)

Query: 525 NLIECHYKRTDESGDSEYFLIDKDRSAD----------RYAVEIAKRKIREKEERERIIF 574
           N  ECHY++TD S +      +K +             ++  E+    I+ ++E +  + 
Sbjct: 549 NNWECHYEKTDISNNCILGKWEKFQKGQEVMVYHPFFWKWVTEMLDDSIKWRKELDNCLK 608

Query: 575 DFEKLVETVLNTTQKLKKKFQTNKKSAEWKAAEELDIWIEDH--------ETDRNTDPA- 625
           +  K   +  N      K++   KK  EW         I+DH        E  R  DP  
Sbjct: 609 NENKQCISKCNGKCDCYKRWVEQKKEKEWTQ-------IKDHFGKQEDMKEQIRGADPGI 661

Query: 626 EYKGLFDELQDLFDEFMTKY 645
             +G+ D ++DLF+     Y
Sbjct: 662 ILEGVLD-IEDLFENIKDTY 680




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09498.1 KIAA1223 protein, putative [Trichomonas
vaginalis G3]
         (719 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_821078   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.48 
XP_809846   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   1.8  
XP_001351318  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   7.8  

>EAY09498.1 on XP_821078   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 940

 Score = 30.0 bits (66), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 5/52 (9%)

Query: 114 LNKSTNFAEINP----ENVDIHTENTIYKAIMCNEKEQFISFTE-REGFDKD 160
           L  +T+  +I P    E+ D    + +YK+   NEKE+ I+  E +EG DKD
Sbjct: 392 LTDNTHIVDIGPVSEKEDEDAAASSLLYKSADNNEKEELIALYEKKEGGDKD 443



>EAY09498.1 on XP_809846   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 764

 Score = 28.5 bits (62), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 17/88 (19%)

Query: 456 LKDNKETTEFLILHGANINEKIIMENLLFIIQQNTIVKKQPIFLFRMVRISMKKDKYERT 515
           LKD+K+ T+FL     +  +K+       + +  T++K+  I++           KY RT
Sbjct: 140 LKDSKDKTQFLEDGSEDPRKKV------DVSRPTTVMKRNDIYML--------VGKYSRT 185

Query: 516 AIHYAALTNNKETSNLLISHGANVNESD 543
           A    +  N+     LL+  G  ++ESD
Sbjct: 186 AAGEKSGAND---GGLLLVKGEVIDESD 210



>EAY09498.1 on XP_001351318  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2169

 Score = 26.2 bits (56), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 3/66 (4%)

Query: 495 QPIFLFRMVRISMKKDKYERTAIHYAALTNNKETSNLLISHGANVNESDKYGKTALHYTA 554
           +P    +      +K KY +    YA  T  KETSN  I+   N+   D Y K   HY +
Sbjct: 383 EPWIKNQKQEFEKQKGKYTKEMQKYANGTTTKETSNGPIN---NLYADDFYKKLQEHYPS 439

Query: 555 ENNFKE 560
            + F E
Sbjct: 440 VDEFLE 445




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09500.1 hypothetical protein TVAG_102490 [Trichomonas
vaginalis G3]
         (347 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09517.1 TKL family protein kinase [Trichomonas
vaginalis G3]
         (1085 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_820186   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           37   0.005
XP_803341   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           36   0.009
XP_804902   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           33   0.13 
XP_805038   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           33   0.14 
XP_815706   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           32   0.23 
XP_815707   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           32   0.23 
XP_811309   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           31   0.43 
AAA69859  ROP1  (Establishment)  [Toxoplasma gondii]                   30   0.60 
XP_821137   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.79 
XP_813587   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   1.3  
XP_807911   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   1.4  
XP_804106   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   1.7  
XP_844699  VSG  (Establishment)  [Trypanosoma brucei]                  28   2.0  
XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]                 29   2.3  
AAM20900  cGMP-dependent protein kinase  (Others)  [Eimeria tene...    28   3.0  
XP_811703   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   3.6  
XP_808957   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   3.9  
XP_820135   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   3.9  
XP_818353   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   4.1  
XP_816459   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   4.2  
AAL15422  MSA-2a2  (Invasion)  [Babesia bovis]                         27   5.0  
ABA06451  MSA-2a2  (Invasion)  [Babesia bovis]                         27   5.2  
AAL15423  MSA-2b  (Invasion)  [Babesia bovis]                          27   5.2  
XP_815479   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   5.3  

>EAY09517.1 on XP_820186   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1133

 Score = 37.4 bits (85), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 7/115 (6%)

Query: 684 SQEKEETKPKSTENPNPNPSQNSEPQKVSSQNSGPSQNSVPSQNSGPSQISEPPKTTRPT 743
           S E +  +PKS E P P   +++EP+   S+++GP      S    P++    PK+  P 
Sbjct: 859 SAEPKPAEPKSAE-PKPAEPKSAEPKPAESKSAGPKPAEPKSAEPKPAE----PKSAEPK 913

Query: 744 PQSPQRPNAQRPNPPNTQPSSPQQNSQIPKTNENQPQKVTQNSTEKTSEEKKKEE 798
           P  P+    +   P + +P   + NS  PK  E  P+       E  S E K  E
Sbjct: 914 PAEPKSAEPKPAEPKSAEPKPAEPNSAEPKPAE--PKSAEPKPAEPKSAEPKPAE 966




 Score = 31.6 bits (70), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 8/118 (6%)

Query: 684 SQEKEETKPKSTENPNPNPSQNSEPQKVSSQNSGPSQNSVPSQNSGPSQISEPPKTTRPT 743
           S E +  +PKS E P P  S+++EP+    +++ P      S    P++    PK+  P 
Sbjct: 799 SAEPKPAEPKSAE-PKPAESKSAEPKPAEPKSAEPKPAESKSAEPKPAE----PKSAEPK 853

Query: 744 PQSPQRPNAQRPNPPNTQPSSPQQNSQIPKTNENQ---PQKVTQNSTEKTSEEKKKEE 798
           P  P+    +   P + +P   +  S  PK  E++   P+     S E    E K  E
Sbjct: 854 PAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAESKSAGPKPAEPKSAEPKPAEPKSAE 911




 Score = 29.3 bits (64), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 8/112 (7%)

Query: 689 ETKPKSTENPNPNPSQ--NSEPQKVSSQNSGPSQNSVPSQNSGPSQISEPPKTTRPTPQS 746
           E KP  +++  P P++  ++EP+   S+++ P      S    P++    PK+  P P  
Sbjct: 811 EPKPAESKSAEPKPAEPKSAEPKPAESKSAEPKPAEPKSAEPKPAE----PKSAEPKPAE 866

Query: 747 PQRPNAQRPNPPNTQPSSPQQNSQIPKTNENQPQKVTQNSTEKTSEEKKKEE 798
           P+    +   P + +P   +  S  PK  E  P+       E  S E K  E
Sbjct: 867 PKSAEPKPAEPKSAEPKPAESKSAGPKPAE--PKSAEPKPAEPKSAEPKPAE 916




 Score = 28.5 bits (62), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 7/115 (6%)

Query: 684  SQEKEETKPKSTENPNPNPSQNSEPQKVSSQNSGPSQNSVPSQNSGPSQISEPPKTTRPT 743
            S E +  +PKS E P P   +++EP+    +++ P      S    P++    PK+  P 
Sbjct: 899  SAEPKPAEPKSAE-PKPAEPKSAEPKPAEPKSAEPKPAEPNSAEPKPAE----PKSAEPK 953

Query: 744  PQSPQRPNAQRPNPPNTQPSSPQQNSQIPKTNENQPQKVTQNSTEKTSEEKKKEE 798
            P  P+    +   P + +P   +  S  PK  E  P+       E  S E K  E
Sbjct: 954  PAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAE--PKSAEPKPAEPKSAEPKPAE 1006




 Score = 28.1 bits (61), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 15/121 (12%)

Query: 684 SQEKEETKPKSTENPNPNPSQNSEPQKVSSQNSGPSQNSVPSQNSGPSQISEPPKTTRPT 743
           S E +  +PKS E P P   +++EP+   S+++ P      S    P++     K+  P 
Sbjct: 789 SAEPKPAEPKSAE-PKPAEPKSAEPKPAESKSAEPKPAEPKSAEPKPAES----KSAEPK 843

Query: 744 PQSPQ-------RPNAQRPNPPNTQPSSPQQNSQIPKTNENQPQKVTQNSTEKTSEEKKK 796
           P  P+        P +  P P   +P S +     PK+ E +P + ++++  K +E K  
Sbjct: 844 PAEPKSAEPKPAEPKSAEPKP--AEPKSAEPKPAEPKSAEPKPAE-SKSAGPKPAEPKSA 900

Query: 797 E 797
           E
Sbjct: 901 E 901




 Score = 28.1 bits (61), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 55/136 (40%), Gaps = 24/136 (17%)

Query: 684 SQEKEETKPKSTENPNPNPSQNSEPQKVSSQNSGPSQNSVPSQNSGPSQ--ISEP----P 737
           S E +  +PKS E P P  S+++EP+    +++ P      S    P++   +EP    P
Sbjct: 819 SAEPKPAEPKSAE-PKPAESKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEP 877

Query: 738 KTTRPTPQS-------PQRPNAQRPNPPNTQPSSPQQNSQIPKTNE--------NQPQKV 782
           K+  P P         P  P +  P P   +P S +     PK+ E         +P+  
Sbjct: 878 KSAEPKPAESKSAGPKPAEPKSAEPKP--AEPKSAEPKPAEPKSAEPKPAEPKSAEPKPA 935

Query: 783 TQNSTEKTSEEKKKEE 798
             NS E    E K  E
Sbjct: 936 EPNSAEPKPAEPKSAE 951




 Score = 27.3 bits (59), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 12/111 (10%)

Query: 689 ETKPKSTENPNPNPSQ--NSEPQKVSSQNSGPSQNSVPSQNSGPSQISEPPKTTRPTPQS 746
           E KP  +++  P P++  ++EP+    +++ P      S    P++    PK+  P    
Sbjct: 881 EPKPAESKSAGPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAE----PKSAEP---K 933

Query: 747 PQRPNAQRPNPPNTQPSSPQQNSQIPKTNENQPQKVTQNSTEKTSEEKKKE 797
           P  PN+  P P   +P S +     PK+ E +P +  +++  K +E K  E
Sbjct: 934 PAEPNSAEPKP--AEPKSAEPKPAEPKSAEPKPAE-PKSAEPKPAEPKSAE 981




 Score = 26.6 bits (57), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 19/126 (15%)

Query: 684  SQEKEETKPKSTENPNPNPSQNSEPQKVSSQNSGPSQNSVPSQNSGPSQ--ISEP----P 737
            S E +  +PKS E P P    ++EP+    +++ P      S    P++   +EP    P
Sbjct: 919  SAEPKPAEPKSAE-PKPAEPNSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEP 977

Query: 738  KTTRPTPQSPQ-------RPNAQRPNPPNTQPSSPQQNSQIPKTNENQPQK---VTQNST 787
            K+  P P  P+        P +  P P   +P S +     PK+ E +P +    T ++ 
Sbjct: 978  KSAEPKPAEPKSAEPKPAEPKSAEPKP--AEPKSAEPKPAEPKSAEPKPAEPNAATSSAR 1035

Query: 788  EKTSEE 793
            E T+++
Sbjct: 1036 EGTADQ 1041



>EAY09517.1 on XP_803341   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 302

 Score = 35.8 bits (81), Expect = 0.009,   Method: Composition-based stats.
 Identities = 31/106 (29%), Positives = 44/106 (41%), Gaps = 17/106 (16%)

Query: 670 LSANSV---PPAKKHISSQEKEETKPKSTENPNPNPSQNSEPQKVSSQNSGPSQ------ 720
           L+AN V   PP +K   S +   T P S E+ N   + N++P       +GP Q      
Sbjct: 80  LNANKVTIPPPERK---SAKAAATSP-SVESANDKVNTNTQPTVPPPATAGPQQTDQTTL 135

Query: 721 --NSVPSQNSGPSQISEPPKTTRPTPQSPQRPNAQRPNPPNTQPSS 764
             +SVPS   G +     PK+  P P  P    +        QP+S
Sbjct: 136 NASSVPS--GGAASTPAEPKSEEPEPAEPNAATSSAREGTADQPAS 179



>EAY09517.1 on XP_804902   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1042

 Score = 32.7 bits (73), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 15/134 (11%)

Query: 682 ISSQEKEETKPKSTENPNPNPSQNSEPQKVSSQNSGPSQNSVPSQNSGPSQISEPPKTTR 741
           ++S+ K E    S E  N N +   E + V   +  P+  + PS  +G S +SEP     
Sbjct: 729 VASESKSEESATSHEELNENDTHEQEKEIV--HDLVPA--APPSTVAGGSSVSEPAIAAE 784

Query: 742 PTPQSPQRPNAQRPNPPNTQPSSPQQN-SQIPKTNENQPQK----------VTQNSTEKT 790
               S Q  NAQ      +Q ++P ++   + + ++ QPQ             + S+E  
Sbjct: 785 SAGNSHQEDNAQLSEDKTSQQTTPHEDYKSMQRDSDVQPQDPQSEVLTEVADVEGSSESY 844

Query: 791 SEEKKKEEEEINMR 804
             +  +EEEE + R
Sbjct: 845 DTQLPEEEEEADDR 858



>EAY09517.1 on XP_805038   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 927

 Score = 32.7 bits (73), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 41/176 (23%), Positives = 70/176 (39%), Gaps = 20/176 (11%)

Query: 670 LSANSV---PPAKKHISSQEKEETKPKSTENPNPNPSQNSEPQKVSSQNSGPSQNSVPSQ 726
           L+AN V   PP +K  S++    T P S E+ N   + N++P       +GP Q    + 
Sbjct: 684 LNANKVTIPPPERK--SAKAAAATSP-SVESANDRVNTNTQPTVPPPATAGPQQTDQTTL 740

Query: 727 NSGPSQISEPPKTTRPTPQSPQ----RPNAQRPNPPNTQPSSPQQNSQIPKTNENQPQKV 782
           N+     S P     PTP  P+    +P   RP     +P   +  S+ PK  E  P   
Sbjct: 741 NTS----SVPSGGAPPTPAEPKSEEPKPAESRPE----EPKPAESESEEPKPAE--PNAA 790

Query: 783 TQNSTEKTSEEKKKEEEEINMRIITINKEAARQATEIRDHFGETIFQAAVKTGDFL 838
           T ++ E T+++            +T    ++   T++     +       + GD +
Sbjct: 791 TSSAREGTADQPASATSSDGHEAVTSVTSSSAAITDVGASSSDDAQTVGTEGGDMM 846



>EAY09517.1 on XP_815706   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 907

 Score = 32.0 bits (71), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 29/123 (23%), Positives = 50/123 (40%), Gaps = 19/123 (15%)

Query: 676 PPAKKHISSQEKEETKPKSTENPNPNPSQNSEPQKVSSQNSGP--------SQNSVPSQN 727
           PP +K + +     +  +    P    ++N++P   S   +GP        S +SVPS  
Sbjct: 694 PPERKPVPAAAATSSSVEPLTTPA---AKNTQPTVPSPATAGPQPTDQKSLSASSVPSGG 750

Query: 728 SGPSQISEPPKTTRPTPQSPQRPNAQRPNPPNTQPSSPQQNSQIPKTNENQPQKVTQNST 787
           +    +SEP   +RP    P     + P P  ++P  P+   +      +QP  VT +  
Sbjct: 751 A----LSEP-AASRPEEPEPAESRPEEPEPAESRPEEPEPARE---GTADQPASVTSSDA 802

Query: 788 EKT 790
             T
Sbjct: 803 AST 805



>EAY09517.1 on XP_815707   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 907

 Score = 32.0 bits (71), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 29/123 (23%), Positives = 50/123 (40%), Gaps = 19/123 (15%)

Query: 676 PPAKKHISSQEKEETKPKSTENPNPNPSQNSEPQKVSSQNSGP--------SQNSVPSQN 727
           PP +K + +     +  +    P    ++N++P   S   +GP        S +SVPS  
Sbjct: 694 PPERKPVPAAAATSSSVEPLTTPA---AKNTQPTVPSPATAGPQPTDQKSLSASSVPSGG 750

Query: 728 SGPSQISEPPKTTRPTPQSPQRPNAQRPNPPNTQPSSPQQNSQIPKTNENQPQKVTQNST 787
           +    +SEP   +RP    P     + P P  ++P  P+   +      +QP  VT +  
Sbjct: 751 A----LSEP-AASRPEEPEPAESRPEEPEPAESRPEEPEPARE---GTADQPASVTSSDA 802

Query: 788 EKT 790
             T
Sbjct: 803 AST 805



>EAY09517.1 on XP_811309   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1033

 Score = 31.2 bits (69), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 5/100 (5%)

Query: 682 ISSQEKEETKPKSTENPNPNPSQNSEPQKVSSQNSGPSQNSVPSQNSGPSQISEPPKTTR 741
           ++S+ K E    S E  N N ++  E + V       S ++V    +G S +SEP     
Sbjct: 720 VASESKSEEITASHEELNENDTEKQEEEIVHDLVPVASSSTV----AGGSSVSEPAIAAE 775

Query: 742 PTPQSPQRPNAQRPNPPNTQPSSPQQN-SQIPKTNENQPQ 780
               S Q  NAQ      +Q ++P ++   + + ++ QPQ
Sbjct: 776 SAGNSRQEDNAQLSEDKTSQQTTPHEDYKSMQRDSDVQPQ 815



>EAY09517.1 on AAA69859  ROP1  (Establishment)  [Toxoplasma gondii]
          Length = 255

 Score = 30.0 bits (66), Expect = 0.60,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 29/78 (37%), Gaps = 1/78 (1%)

Query: 702 PSQNSEPQKVSSQNSGPSQNSVPSQNSGPSQISEPPKTTRPTPQSPQRP-NAQRPNPPNT 760
           P+Q       S++  G S     S+NS             P      RP NAQ   PPN 
Sbjct: 106 PAQQPAVALGSAEGEGTSTTESASENSEDDDTFHDALQELPEDGLEVRPPNAQELPPPNV 165

Query: 761 QPSSPQQNSQIPKTNENQ 778
           Q   P    ++P + E +
Sbjct: 166 QELPPPTEQELPPSTEQE 183



>EAY09517.1 on XP_821137   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 956

 Score = 30.0 bits (66), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 27/113 (23%), Positives = 40/113 (35%), Gaps = 17/113 (15%)

Query: 648 LRNAENLFSAVQFTNLIALLFILSANSVPPAKKHISSQEKEETKPKSTENPNPNPSQNSE 707
           LR +EN  S    T+       L   +  PA K    Q    T P   +N +  PS +++
Sbjct: 794 LRKSENAGSGGLSTSG------LPTATTSPAAKESEKQSASGTSPSGNKNVDGTPSSDAD 847

Query: 708 PQKVSSQNSGPSQNSVPSQNSGPSQISEPPKTTRPTPQSPQRPNAQRPNPPNT 760
           P  V+            S N+G    ++ P    P       P A+   P  T
Sbjct: 848 PAVVTV-----------SGNTGQGDGTQKPSVGAPVRADTNAPTAETMAPDGT 889



>EAY09517.1 on XP_813587   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 751

 Score = 29.3 bits (64), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 37/172 (21%), Positives = 68/172 (39%), Gaps = 22/172 (12%)

Query: 670 LSANSV---PPAKKHISSQEKEETKPKSTENPNPNPSQNSEPQKVSSQNSGPSQNSVPSQ 726
           L+AN V   PP +K + +     T P S E+ N   + N++P       +GP Q    + 
Sbjct: 518 LNANKVTIPPPKRKPVPAAAA--TSP-SVESANDRVNTNTQPTVPPPATAGPQQTDQATL 574

Query: 727 NSGPSQISEPPKTTRPTPQSPQRPNAQRPNPPNTQPSSPQQNSQIPKTNENQPQKVTQNS 786
           N+     S  P  +   P +P  P ++ P P  ++       S+ PK  E  P   T ++
Sbjct: 575 NT-----SSVP--SGGAPSTPAEPKSEEPKPAESE-------SEEPKPAE--PNAATSSA 618

Query: 787 TEKTSEEKKKEEEEINMRIITINKEAARQATEIRDHFGETIFQAAVKTGDFL 838
            E T+++            +T    ++   T++     +       + GD +
Sbjct: 619 REGTADQPASATSSDGHEAVTSVTSSSAAITDVGASSSDDAQTVGTEGGDMM 670



>EAY09517.1 on XP_807911   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 281

 Score = 28.9 bits (63), Expect = 1.4,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 9/109 (8%)

Query: 708 PQKVSSQNSGPSQNSVPSQNSGPSQISEPPKTTRPTPQSPQRPNAQRPNPPNTQPSSPQQ 767
           PQK   Q+  P ++     ++G  Q S    +T P   S     A+         S    
Sbjct: 9   PQK---QDLSPEKSENEKHSAGSRQAS----STDPAGSSTSA--AEGKVEEVASSSVGSA 59

Query: 768 NSQIPKTNENQPQKVTQNSTEKTSEEKKKEEEEINMRIITINKEAARQA 816
           +S  P   E+ PQKV +     T +  ++E+E  ++ ++    E A +A
Sbjct: 60  SSFSPTAGEDSPQKVRETDVPATEDHFEREQEHSSLSVVQPMTEQAEEA 108



>EAY09517.1 on XP_804106   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1006

 Score = 29.3 bits (64), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 49/118 (41%), Gaps = 29/118 (24%)

Query: 726 QNSGPSQISEPPKTTRPTPQ----SPQRPNAQRPNPPNTQPSS--PQQNS---------- 769
           QNS  SQ SE  K   P+PQ    SP++   ++ +  + Q SS  P  +S          
Sbjct: 718 QNSHLSQPSE--KDATPSPQKQDLSPEKSENEKHSAGSRQASSTDPAGSSTSAAEGKVEE 775

Query: 770 -----------QIPKTNENQPQKVTQNSTEKTSEEKKKEEEEINMRIITINKEAARQA 816
                        P   E+ PQKV +     T +  ++E+E  ++ ++    E A +A
Sbjct: 776 VASSSVGSASSFSPTAGEDSPQKVRETDVPATEDHFEREQEHSSLSVVQPMTEQAEEA 833



>EAY09517.1 on XP_844699  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 341

 Score = 28.5 bits (62), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 5/56 (8%)

Query: 705 NSEPQKVSSQNSGPSQNSVPSQNSGPSQISEPPKTTRPTPQSPQRPNAQRPNPPNT 760
           N+ PQ   +     S  S PS+  GP   +    +T+      +RPNAQR     T
Sbjct: 258 NAHPQTKETSKKEKSDRSTPSKTEGPHTTARTDGSTQ-----NERPNAQRNTTATT 308



>EAY09517.1 on XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]
          Length = 2112

 Score = 28.9 bits (63), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 16/52 (30%), Positives = 23/52 (44%)

Query: 687 KEETKPKSTENPNPNPSQNSEPQKVSSQNSGPSQNSVPSQNSGPSQISEPPK 738
           K E  P+  E PNP  + N   +    +N  P +   P +N  P +  EP K
Sbjct: 501 KPEENPEPVEKPNPEENPNPVEKPTPEENPNPVEKPTPEENPNPVEKPEPEK 552



>EAY09517.1 on AAM20900  cGMP-dependent protein kinase  (Others)  [Eimeria
           tenella]
          Length = 255

 Score = 27.7 bits (60), Expect = 3.0,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 29/54 (53%), Gaps = 2/54 (3%)

Query: 676 PPAKKHISSQEKEETKPKSTENPNPNPSQNSEPQKVSSQNSGPSQNSVPSQNSG 729
           P  ++  ++QE++ T P    N  P P++    +K+S  ++   +  +P+ ++G
Sbjct: 15  PEPREQQAAQEQKSTGPSGAPNDAPAPAEAE--RKMSGSSATAPKGEMPTASTG 66



>EAY09517.1 on XP_811703   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1043

 Score = 28.1 bits (61), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 29/134 (21%), Positives = 54/134 (40%), Gaps = 15/134 (11%)

Query: 682 ISSQEKEETKPKSTENPNPNPSQNSEPQKVSSQNSGPSQNSVPSQNSGPSQISEPPKTTR 741
           ++S+ K E    S E  N + ++  E +        P    + S  +G S +SEP   T 
Sbjct: 730 VASESKSEGSATSHEELNEDDTEKQEEESADGVVLAP----LLSTFAGGSSVSEPATATE 785

Query: 742 PTPQSPQRPNAQRPNPPNTQPSSPQQNSQ-IPKTNENQPQ----------KVTQNSTEKT 790
               S    N Q      +Q ++P +  + + + ++ QPQ             + S E  
Sbjct: 786 IAGNSRPEDNVQLSEDKTSQQTTPHEAKESMQRDSDVQPQDPQSEVLTEVADVEGSAESY 845

Query: 791 SEEKKKEEEEINMR 804
             ++ +E+EE + R
Sbjct: 846 DTQQPEEDEEADGR 859



>EAY09517.1 on XP_808957   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1446

 Score = 28.1 bits (61), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 68/174 (39%), Gaps = 9/174 (5%)

Query: 684  SQEKEETKPKSTENPNPNPSQNSEPQKVSSQNSGPSQNSVPSQNSGPSQISEPPKTTRPT 743
            S E E T+PKS E P P   +++EP+     ++ P      S    P++    PK+  P 
Sbjct: 1199 SAEPEPTEPKSAE-PEPTEPKSAEPKPAEPYSAEPEPTEPKSAEPKPAE----PKSAEPE 1253

Query: 744  PQSPQRPNAQRPNPPNTQPSSPQQNSQIPKTNENQPQKVTQNSTEKTSEEKKKEEEEINM 803
            P  P+    +   P + +P   +  S  P+  E  P+       E  S E K  E +   
Sbjct: 1254 PAEPKSAEPEPAEPKSAEPKPAEPKSAEPEPTE--PKSAGPKPAEPYSAEPKPAEPKSAE 1311

Query: 804  RIITINKEAARQATEIRDHFGETI--FQAAVKTGDFLFLRLLLSIPNVKPFATD 855
               T  K A  + TE +    +    + A  K  +     L  + P+ +  A D
Sbjct: 1312 PEPTEPKSAEPEPTEPKSAGPKPAEPYSAEPKPAEPKSAELNATTPSAREGAAD 1365




 Score = 26.9 bits (58), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 49/115 (42%), Gaps = 7/115 (6%)

Query: 684  SQEKEETKPKSTENPNPNPSQNSEPQKVSSQNSGPSQNSVPSQNSGPSQISEPPKTTRPT 743
            S E +  +PKS E P P   +++EP+    +++GP      S    P++    PK+  P 
Sbjct: 899  SAEPKPAEPKSAE-PKPAEPKSAEPKPAEPKSAGPKPAEPKSAEPKPAE----PKSAEPK 953

Query: 744  PQSPQRPNAQRPNPPNTQPSSPQQNSQIPKTNENQPQKVTQNSTEKTSEEKKKEE 798
            P  P+    +   P + +P   +  S  PK  E  P+       E  S E K  E
Sbjct: 954  PAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAE--PKSAEPKPAEPKSAEPKPAE 1006



>EAY09517.1 on XP_820135   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1519

 Score = 28.1 bits (61), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 11/117 (9%)

Query: 684  SQEKEETKPKSTENPNPNPSQNSEPQKVSSQNSGPSQNSVPSQNSGPSQISEPPKTTRPT 743
            S E +  +PKS E P P   +++EP+    +++ P      S    P++    PK+  P 
Sbjct: 980  SAEPKPAEPKSAE-PKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAE----PKSAEPK 1034

Query: 744  PQSPQ--RPNAQRPNPPNTQPSSPQQNSQIPKTNENQPQKVTQNSTEKTSEEKKKEE 798
            P  P+   P +  P P   +P+ P+   Q  K+ E++P    Q S E    E+K  E
Sbjct: 1035 PAEPKSAEPKSAEPKPAEPKPAEPKPAEQ--KSAESKP--AEQKSAESKPAEQKSAE 1087



>EAY09517.1 on XP_818353   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 903

 Score = 27.7 bits (60), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 35/165 (21%), Positives = 60/165 (36%), Gaps = 15/165 (9%)

Query: 657 AVQFTNLIALLFILSA---NSVPPAKKHISSQEKEETKPKSTENPN---------PNPSQ 704
           +V  TN++     LS+    ++ P K    S EKE  KP +  + +         PN  +
Sbjct: 705 SVTVTNVLLYNRPLSSEEIGAIDPNKDSTPSLEKEAAKPSTVSSASIMPPAPPVTPNAQK 764

Query: 705 NSEPQKVSSQNSGPSQNSVPSQNSGPSQISEPPKTTRPTPQSPQRPNAQRPNPPNTQPSS 764
              P    +Q +   Q S+ S  +G    S    +T  TP + +    Q  +   T P  
Sbjct: 765 AGNPSTAGTQLTEQGQ-SMGSSGAGSDGASASAVSTVSTPSAEEESVVQVTS--GTSPDG 821

Query: 765 PQQNSQIPKTNENQPQKVTQNSTEKTSEEKKKEEEEINMRIITIN 809
            Q        +     +  +  T    EE   ++ E+N   +  N
Sbjct: 822 TQTVGGGSTADGEPTMETREGGTNGQEEEVNTQDREVNATALGSN 866



>EAY09517.1 on XP_816459   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 904

 Score = 27.7 bits (60), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 16/43 (37%), Positives = 23/43 (53%)

Query: 718 PSQNSVPSQNSGPSQISEPPKTTRPTPQSPQRPNAQRPNPPNT 760
           P+++S       PS+ S    T+  TP SP  PNAQ+   P+T
Sbjct: 727 PNKDSTSPLEKNPSEHSTVSSTSIITPISPVSPNAQKTETPST 769



>EAY09517.1 on AAL15422  MSA-2a2  (Invasion)  [Babesia bovis]
          Length = 292

 Score = 27.3 bits (59), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 5/55 (9%)

Query: 735 EPPKTTRPTPQSPQRPNAQRPNPPNTQPSSPQQNSQIPKTNE-----NQPQKVTQ 784
           +P + + P P SPQRP   +    +T P +P   S    T E     + P K TQ
Sbjct: 200 KPAQESSPAPSSPQRPAETQQTQDSTAPGTPAAPSPQGPTAESPSQADHPTKPTQ 254



>EAY09517.1 on ABA06451  MSA-2a2  (Invasion)  [Babesia bovis]
          Length = 287

 Score = 26.9 bits (58), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 3/47 (6%)

Query: 736 PPKTTRPTPQSPQRPNAQRPNPPNTQPSSPQQNSQIPKTNENQPQKV 782
           P KT  PT  SPQ     +P  PNT  S+  Q  Q  +T EN+P + 
Sbjct: 201 PSKTPSPT-SSPQATPGAKPAAPNTSESAGGQPQQ--ETPENRPSQA 244



>EAY09517.1 on AAL15423  MSA-2b  (Invasion)  [Babesia bovis]
          Length = 287

 Score = 26.9 bits (58), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 3/47 (6%)

Query: 736 PPKTTRPTPQSPQRPNAQRPNPPNTQPSSPQQNSQIPKTNENQPQKV 782
           P KT  PT  SPQ     +P  PNT  S+  Q  Q  +T EN+P + 
Sbjct: 201 PSKTPSPT-SSPQATPGAKPAAPNTSESAGGQPQQ--ETPENRPSQA 244



>EAY09517.1 on XP_815479   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1047

 Score = 27.3 bits (59), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 2/76 (2%)

Query: 724 PSQNSGPSQISEPPKTTRPTPQSPQRPNAQRPNPPNTQPSS-PQQNSQIPKTNENQPQKV 782
           PS ++  S + EP   T     S    NAQ      +Q ++  + N  + + +E Q Q++
Sbjct: 772 PSTDAAGSSVPEPATATESAGNSRSEDNAQLSEGETSQQATLNEDNESMQRDSELQTQEL 831

Query: 783 -TQNSTEKTSEEKKKE 797
            ++ STE T  E   E
Sbjct: 832 QSEESTEATDFEGSAE 847




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09519.1 hypothetical protein TVAG_102680 [Trichomonas
vaginalis G3]
         (392 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_818232   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.7  
XP_814443   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   3.5  
XP_966305  PfEMP1  (Establishment)  [Plasmodium falciparum]            26   5.5  
XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 25   10.0 

>EAY09519.1 on XP_818232   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 933

 Score = 27.3 bits (59), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 13/28 (46%), Positives = 21/28 (75%)

Query: 3   QDSTFSALLEKYSEYLTDASNKDDLLAL 30
           +D+  SALL K +   TD++NK++L+AL
Sbjct: 414 EDAAASALLYKSAGSGTDSNNKEELIAL 441



>EAY09519.1 on XP_814443   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 924

 Score = 26.2 bits (56), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 105 EQLRERKKELQTQYQEMQKEYNQLIIDSVSTKDRLQKELADLRDELARTLV 155
           EQL +R KE+ T ++E+    + L    ++ KDR   + A   D++   LV
Sbjct: 458 EQL-QRVKEVLTTWKEVDGRVSNLCTSLIAEKDRASTDDACSADKITAGLV 507



>EAY09519.1 on XP_966305  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3954

 Score = 25.8 bits (55), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 2/39 (5%)

Query: 310  LKESYELLWNTDDVGEGQASSARAVVITPKVKPKAAPVP 348
             K  YE +   D   +G+    + +  TP+VKPK   VP
Sbjct: 3384 WKNPYESI--ADKALKGKCDCKKMIPTTPEVKPKKPAVP 3420



>EAY09519.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 25.0 bits (53), Expect = 10.0,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 25/110 (22%)

Query: 212  YMEKL------LHDIYENAEQLPIDQLLKRFNDSADKVE------SEIAQLQAELTSEH- 258
            Y+EKL      L D+YE  E + I+++LK  ++S  K E       +I +    +T++  
Sbjct: 1356 YVEKLENTLHELKDMYEFLETIDINKILKSIHNSMKKSEEYSNETKKIFEQSVNITNQFI 1415

Query: 259  --------SRNENLQ-MESRQLEER---LTAQQEEVSRMKKQQSQLVRDI 296
                    S N N + +   Q+++    L  ++EE+S  +KQ ++ + DI
Sbjct: 1416 EDVEILKTSINPNYESLNDDQIDDNIKSLVLKKEEISEKRKQVNKYITDI 1465




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09523.1 hypothetical protein TVAG_102720 [Trichomonas
vaginalis G3]
         (1933 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609935  variant erythrocyte surface antigen-1, alpha subun...    30   1.7  

>EAY09523.1 on XP_001609935  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1317

 Score = 30.0 bits (66), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 3/34 (8%)

Query: 1806 GDDKKKGGSPRGGKGKGK---KGDKGKAQEPPKQ 1836
            G D  KGG  RG  G+     KGDK  AQ+PP Q
Sbjct: 1043 GGDSDKGGKYRGSVGQALIQIKGDKDSAQQPPPQ 1076




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09525.1 hypothetical protein TVAG_102740 [Trichomonas
vaginalis G3]
         (419 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609315  variant erythrocyte surface antigen-1, alpha subun...    29   0.58 
XP_807804   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.93 
XP_819719   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   1.0  
XP_966160  PfEMP1  (Establishment)  [Plasmodium falciparum]            27   4.0  
XP_001609040  variant erythrocyte surface antigen-1, alpha subun...    26   5.5  

>EAY09525.1 on XP_001609315  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1338

 Score = 28.9 bits (63), Expect = 0.58,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 13/76 (17%)

Query: 240 LQSFKDTEVTCSFSSVA--VTSDVSESMEVSELMKSLRKNFEERIKNK-----------E 286
           L++ K+ E    +S+    +++ + + +EV +++  L K +EE +K+K           E
Sbjct: 772 LENAKNIEKERDYSNAKDKISAAIHKVLEVLKILTKLAKQYEEELKDKMKGNEPTNNKIE 831

Query: 287 YIGFIKSLPDENTIFD 302
            I FIK L +   I D
Sbjct: 832 LISFIKELKEFLNIID 847



>EAY09525.1 on XP_807804   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1054

 Score = 28.5 bits (62), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 50/119 (42%), Gaps = 26/119 (21%)

Query: 285 KEYIGFIKSLPDENTIFDTFLGLGLDISLIQKFKLND-----KMNDLYI-------GLNE 332
           K  +GF+ S  +ENT  D +LG+   I+ +   K+       K    +        G N+
Sbjct: 506 KGLVGFLSSTSNENTWMDEYLGVNATITKVTGGKVTSTEKGVKFRGAWAEWPVGRQGQNQ 565

Query: 333 ----ADFGFSDLLSITGYSVEKDGTNKIMSNVKFSPTTLGELEGKVLSRSIIFGLESIH 387
               A++ F+ + +++ + V + GT   +  VK S T             +IFGL   H
Sbjct: 566 LYHFANYKFTLVATVSIHEVPEGGTPIPLLGVKLSET----------DSPLIFGLFYTH 614



>EAY09525.1 on XP_819719   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1053

 Score = 28.1 bits (61), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 50/119 (42%), Gaps = 26/119 (21%)

Query: 285 KEYIGFIKSLPDENTIFDTFLGLGLDISLIQKFKLND-----KMNDLYI-------GLNE 332
           K  +GF+ S  +ENT  D +LG+   I+ +   K+       K    +        G N+
Sbjct: 505 KGLVGFLSSTSNENTWMDEYLGVNATITKVTGGKVTSTEKGVKFRGAWAEWPVGRQGQNQ 564

Query: 333 ----ADFGFSDLLSITGYSVEKDGTNKIMSNVKFSPTTLGELEGKVLSRSIIFGLESIH 387
               A++ F+ + +++ + V + GT   +  VK S T             +IFGL   H
Sbjct: 565 LYHFANYKFTLVATVSIHEVPEGGTPIPLLGVKLSET----------DSPLIFGLFYTH 613



>EAY09525.1 on XP_966160  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2394

 Score = 26.6 bits (57), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 7/55 (12%)

Query: 11   EQIFHNTHESIQMAIQFESAQNFDKILDRLNKYCPGLHYGSDGKYIFKTNNKVSV 65
            ++IF NT E+ + AI  E    F   L++ N        GSD K    T  K++ 
Sbjct: 1647 KKIFENTEETFKPAIDCEPCSEFKVKLEKCN-------CGSDAKGNTCTTGKITA 1694



>EAY09525.1 on XP_001609040  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1335

 Score = 25.8 bits (55), Expect = 5.5,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 13/65 (20%)

Query: 112 ASDGMFLHKIFDVIKSEDEITTIPQIVATEKQFEKEIKEYTGRKIPFFSVDHSLTRIHPK 171
           A DG  LHK+ +++K              EKQ ++E KE       FF + +   ++   
Sbjct: 775 AIDG--LHKVLEILKE-----------GVEKQIKEEAKEAKKTLDVFFKLTNDENKLENV 821

Query: 172 IKQEF 176
           +KQE 
Sbjct: 822 LKQEL 826




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09528.1 hypothetical protein TVAG_102770 [Trichomonas
vaginalis G3]
         (691 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001349434  PfEMP1  (Establishment)  [Plasmodium falciparum]         29   1.4  

>EAY09528.1 on XP_001349434  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2109

 Score = 28.9 bits (63), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 10/94 (10%)

Query: 181 KSSFVDIHIM-DVTGDISFGTQFQGFLITFENGKELQLNAFQCH--VNMKFD-----MIT 232
           +S+  DI ++    G  S   +++ F    EN K  Q+  +QCH   N K D       +
Sbjct: 512 ESNTTDIPVLTPEKGKTSILQKYRIFCQNAENNK--QIKEWQCHYEKNDKSDDSDETHNS 569

Query: 233 PNATLKLWQYFISQAFFDSYVSFFLNEPTNIIAD 266
            N  L  W+ F     F SY SFF     +++ D
Sbjct: 570 DNCILGKWENFEKGQEFKSYYSFFYGSIIDMLKD 603




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09535.1 CAMK family protein kinase [Trichomonas
vaginalis G3]
         (392 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    65   1e-12
XP_001610568  variant erythrocyte surface antigen-1, alpha subun...    27   1.9  
XP_001349738  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   3.5  
XP_001349514  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   3.8  

>EAY09535.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 65.1 bits (157), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 125/306 (40%), Gaps = 68/306 (22%)

Query: 18  NYKLIREIGVGSFSIVWLARNL----KADLDVAIKIIPKKRIATDVNIIRFERETNFLKQ 73
           +Y+++R+IG G FS V+   N     K  + +   +  KK       +       N +K 
Sbjct: 54  SYEIVRKIGRGKFSEVFEGLNTVTKDKCVIKILKPVKKKKIKREIKILQNLRGGPNIIKL 113

Query: 74  LDHPLIAQ------YFEHLEDDNYHYFVMELAPNGDLLAAVNRQGKMDEQQAKLYFAQLI 127
           LD     Q       FEH+ + ++      L P             +  Q  K Y  QL+
Sbjct: 114 LDIVKDPQSRTPSLIFEHVNNTDF----KTLYPT------------LTIQDIKYYIYQLL 157

Query: 128 VVLDYLHNDMLVAHRDLKAENVLLDKNENI-RLIDFGFSRSFTADDPNLNTTCGSPAYVP 186
             ++Y H+  ++ HRD+K  NV++D  + I RLID+G +  F   +   +    +  Y  
Sbjct: 158 KAMNYCHSQGIM-HRDIKPHNVMIDHEKKILRLIDWGLA-EFYHPEQEYSVRVATRYYKG 215

Query: 187 PE-MIKREAYTVQADVWSTGILLYSLVVGRLPFEDSENNVQKILQKIA------------ 233
           PE ++    Y    D+WS G +L  ++  + PF    +N  +++ KIA            
Sbjct: 216 PELLVDMRYYDYSLDIWSIGCMLAGIIFKKEPFFYGHDNYDQLV-KIAKVLGTEDLHRYF 274

Query: 234 --YSEPFYPRF-----------------------ISPDLKDLLTKMLTKQPDKRITIAEI 268
             Y   F P +                       +SP++ DLL +ML     KRIT  E 
Sbjct: 275 EKYGLKFAPAYQEILGNHSKKPWTKFVHHENQHLVSPEVMDLLDRMLVYDHTKRITPLEA 334

Query: 269 RKHPWF 274
            +HP+F
Sbjct: 335 MEHPFF 340



>EAY09535.1 on XP_001610568  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1329

 Score = 27.3 bits (59), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 8/60 (13%)

Query: 323 LIAHEFDSET-AIYLMYRKRKITNLLHGVIKQGVSNEVKRSTSLTNVTGN----SNTPKI 377
           LI  E D++  A+ +++    +TN +  VI+QGVS E    T+L N   N     N+PK 
Sbjct: 798 LIKKEVDNDKFALGVIFDPAVVTNEVENVIQQGVSQEY---TTLLNAINNLLSICNSPKC 854



>EAY09535.1 on XP_001349738  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2162

 Score = 26.6 bits (57), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 16/107 (14%)

Query: 156  NIRLIDFGFSRSFTADDPNLNTTCGSPAYVPPEMIKREAYTVQADVWSTGILLYSLVVGR 215
            N  L  FG S    A  P+  T   S   +PP+ +++  YT+  D     I     +VG 
Sbjct: 999  NAGLDPFGGSVDDEASTPDPQTQLQS-GTIPPDFLRQMFYTL-GDYRDICIGGDRDIVGD 1056

Query: 216  LPFEDSENNVQKILQKIAYSEPFYPRFISPDLKDLLTKMLTKQPDKR 262
                + E                 P  IS  +K++L K+  KQPDK+
Sbjct: 1057 TIVSNKEGGT--------------PTKISDKIKEILEKVDKKQPDKQ 1089



>EAY09535.1 on XP_001349514  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2120

 Score = 26.2 bits (56), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)

Query: 205 GILLYSLVVGRLPFEDSENNVQKILQKIAYSEPFYPR--FISPDLKDLL 251
           G+L     VG  P +D E+  +K+LQK    E F  +  +   D KD+L
Sbjct: 943 GVLQLLGTVGTPPTDDEEDPPEKMLQKGEIPEEFKRQMFYTLADYKDIL 991




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09536.1 hypothetical protein TVAG_276090 [Trichomonas
vaginalis G3]
         (321 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609101  variant erythrocyte surface antigen-1, alpha subun...    26   4.4  
XP_001609163  variant erythrocyte surface antigen-1, alpha subun...    26   4.4  

>EAY09536.1 on XP_001609101  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1359

 Score = 25.8 bits (55), Expect = 4.4,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 19/66 (28%)

Query: 2    NELNILGLEATGGIQIENDEDDYSTTDAEENPTISTTSTQKLN------SNLLNQQSKPV 55
            N  N+ G +     Q E DE DYS TD        T ST+K +      S ++N++ +  
Sbjct: 1223 NPFNLEGYQ-----QKEKDEGDYSITD--------TKSTKKCHQFLDSLSAVINKKKESD 1269

Query: 56   SKETDN 61
             K+ DN
Sbjct: 1270 QKDQDN 1275



>EAY09536.1 on XP_001609163  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1360

 Score = 25.8 bits (55), Expect = 4.4,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 19/66 (28%)

Query: 2    NELNILGLEATGGIQIENDEDDYSTTDAEENPTISTTSTQKLN------SNLLNQQSKPV 55
            N  N+ G +     Q E DE DYS TD        T ST+K +      S ++N++ +  
Sbjct: 1224 NPFNLEGYQ-----QKEKDEGDYSITD--------TKSTKKCHQFLDSLSAVINKKKESD 1270

Query: 56   SKETDN 61
             K+ DN
Sbjct: 1271 QKDQDN 1276




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09541.1 hypothetical protein TVAG_276140 [Trichomonas
vaginalis G3]
         (85 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_966305  PfEMP1  (Establishment)  [Plasmodium falciparum]            23   3.6  
XP_656181  Hgl2  (Adhesin)  [Entamoeba histolytica]                    22   6.8  
XP_954179  TashAT2  (Establishment)  [Theileria annulata]              22   9.5  

>EAY09541.1 on XP_966305  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3954

 Score = 22.7 bits (47), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 11/74 (14%)

Query: 11  GGYGCDRTSYGGSFEPKIQIKSNSNQKKNPKSLNESEEVEGPT-FDELDQ--------AR 61
           GGY   R + GG  E    + SN  + K+ K  +++++V  PT FD + Q        A 
Sbjct: 260 GGYSYFRKTCGGDNEKNSTLASNKCRCKDEKGEHDTDQV--PTYFDYVPQYLRWFEEWAE 317

Query: 62  DLIVKQNTKYETTR 75
           D   K+  K E  +
Sbjct: 318 DFCRKKKIKVENVK 331



>EAY09541.1 on XP_656181  Hgl2  (Adhesin)  [Entamoeba histolytica]
          Length = 1286

 Score = 21.9 bits (45), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 8/17 (47%), Positives = 10/17 (58%)

Query: 14  GCDRTSYGGSFEPKIQI 30
           GC  T Y  S EPK++ 
Sbjct: 455 GCVVTKYNASCEPKVKC 471



>EAY09541.1 on XP_954179  TashAT2  (Establishment)  [Theileria annulata]
          Length = 1161

 Score = 21.6 bits (44), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 4/47 (8%)

Query: 35  NQKKNPKSLNESEEVEGPTFDEL----DQARDLIVKQNTKYETTRTE 77
           ++ K PKS+ E  E E  T D L    ++  DL +K  +K   +  E
Sbjct: 922 SESKTPKSVFEQTEPETITLDLLSSDDEEPIDLSIKHKSKASESHVE 968




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09543.1 hypothetical protein TVAG_276160 [Trichomonas
vaginalis G3]
         (302 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_827755  VSG  (Establishment)  [Trypanosoma brucei]                  30   0.18 
XP_001350595  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   3.1  
AAX77225  Falcipain 2'  (Cysteine protease)  [Plasmodium falcipa...    25   5.2  

>EAY09543.1 on XP_827755  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 510

 Score = 30.0 bits (66), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 12/28 (42%), Positives = 18/28 (64%)

Query: 256 LRKRLINESIPHEYHEFPNMFHVFNAAT 283
           LR+ LI +++P  Y   P +  +FNAAT
Sbjct: 11  LRETLITKTLPMPYSTIPTLLLIFNAAT 38



>EAY09543.1 on XP_001350595  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2256

 Score = 26.2 bits (56), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)

Query: 256  LRKRLINESIPHEYHEFPNMFHVFNAATPLKESQIANQ 293
            L KR  NE    E+H  P   +++N A P ++  I NQ
Sbjct: 2052 LLKRKENELFGTEHH--PKHTNIYNVAKPARDDPITNQ 2087



>EAY09543.1 on AAX77225  Falcipain 2'  (Cysteine protease)  [Plasmodium
           falciparum]
          Length = 484

 Score = 25.4 bits (54), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 256 LRKRLINESIPHEYHEFPNMFHVFNAATPLKESQ 289
           L K+ +N      YHEF N +    ++ PLK S+
Sbjct: 206 LYKKELNRFADLTYHEFKNKYLSLRSSKPLKNSK 239




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09546.1 hypothetical protein TVAG_276190 [Trichomonas
vaginalis G3]
         (675 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_966160  PfEMP1  (Establishment)  [Plasmodium falciparum]            29   1.3  
XP_829786  VSG  (Establishment)  [Trypanosoma brucei]                  27   2.9  
XP_803420  VSG  (Establishment)  [Trypanosoma brucei]                  27   3.2  
XP_812044   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   3.8  
XP_806338   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   5.5  
XP_001349512  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   5.6  

>EAY09546.1 on XP_966160  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2394

 Score = 28.9 bits (63), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 216  QKMCNTLSQRCNQTEAFIQGLEQAKQTNS 244
            ++ C T    CN  EAF+Q L   K+ N 
Sbjct: 1616 KQFCGTPETTCNTAEAFLQNLGSCKKYNG 1644



>EAY09546.1 on XP_829786  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 482

 Score = 27.3 bits (59), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 6/63 (9%)

Query: 161 NEIAKINEVKQECIRSYNDQ---KAAHTSNLQEL--DSLTEETKKYRITIKQ-LASFKMQ 214
           +EI  + +V + C+R Y D+   K A   N+     D+ T+ T K+    K+ LA  KM 
Sbjct: 309 SEIPIVKQVAKGCLRQYKDKTEMKPADEENMTTFLKDAYTDSTTKFEAKFKKLLADTKML 368

Query: 215 IQK 217
           + +
Sbjct: 369 VYR 371



>EAY09546.1 on XP_803420  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 526

 Score = 27.3 bits (59), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 2/66 (3%)

Query: 576 DLLAAIVEKKQAAARYKSLIDQLSTETSTIKQTLDMKEKKSRRNATEIEDRT--TKQMDL 633
           DLLAA+  + +  A   +L   +ST  +T ++  + K K +   A  +  R   T+ +  
Sbjct: 82  DLLAAVTNQTEKRAATYALAAYMSTAAATARRVHNGKYKAAVATAKFLHRRAALTRTLLA 141

Query: 634 INMRSK 639
           IN+R K
Sbjct: 142 INIRGK 147



>EAY09546.1 on XP_812044   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 855

 Score = 27.3 bits (59), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 14/54 (25%), Positives = 26/54 (48%)

Query: 231 AFIQGLEQAKQTNSKQLAKLQDSYNEHQQLVQSYENIEDKIKKQEQQQDVVLNK 284
           AF +G   AK+ +++      D   E+      +  + +K+KK+E +   VL K
Sbjct: 137 AFAEGHIDAKKPHTESTKPSSDVVAEYIDSAWEWPTLVEKVKKEEWRAHTVLGK 190



>EAY09546.1 on XP_806338   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 652

 Score = 26.6 bits (57), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 14/54 (25%), Positives = 26/54 (48%)

Query: 231 AFIQGLEQAKQTNSKQLAKLQDSYNEHQQLVQSYENIEDKIKKQEQQQDVVLNK 284
           AF +G   AK+ +++      D   E+      +  + +K+KK+E +   VL K
Sbjct: 137 AFAEGHIDAKKPHTESTNPSSDVVAEYIDSAWEWPTLVEKVKKEEWRAHTVLGK 190



>EAY09546.1 on XP_001349512  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2980

 Score = 26.6 bits (57), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 14/41 (34%), Positives = 23/41 (56%)

Query: 609 LDMKEKKSRRNATEIEDRTTKQMDLINMRSKYRDTSEKLDL 649
           LD   K   ++   I ++  + +D+I   SKY+DT + LDL
Sbjct: 924 LDSGSKDMEKHLISIFEKIKENLDVIKYNSKYKDTQKFLDL 964




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09548.1 Ser/Thr protein phosphatase, putative
[Trichomonas vaginalis G3]
         (481 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_818859   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   4.4  
XP_001351319  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   9.9  

>EAY09548.1 on XP_818859   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 867

 Score = 26.6 bits (57), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 12/40 (30%), Positives = 17/40 (42%)

Query: 56  FLGDYVDRGDNSLEVMTILMALYCKYPDKVYLLRGNHEFS 95
           F    VD  +N+     +L        D VY+L GNH  +
Sbjct: 156 FCTQIVDTAENNFGATEVLRPTTVVIEDSVYMLLGNHSLT 195



>EAY09548.1 on XP_001351319  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2646

 Score = 25.4 bits (54), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 12/43 (27%), Positives = 21/43 (48%)

Query: 423  ESCDRKCSPPPPNSLASMPAQVTASDAQIALQQPNDAKPKKKR 465
            ++C  K  P  P S   +P   T+++      + +DAK + KR
Sbjct: 1270 DACTLKYGPKAPTSWKCIPTGNTSNEGAATDSEGSDAKSRHKR 1312




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09549.1 Sec1 family protein [Trichomonas vaginalis
G3]
         (543 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_814899   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   3.1  
XP_806591   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   3.5  
XP_827758  VSG  (Establishment)  [Trypanosoma brucei]                  26   5.2  
XP_844158  VSG  (Establishment)  [Trypanosoma brucei]                  26   8.2  

>EAY09549.1 on XP_814899   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 827

 Score = 26.9 bits (58), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 11/68 (16%)

Query: 260 LANDVFGITRNAIKVGKETFDLDTGI-DQFWAENRLSNTGEVMNTVSKNVKDFESKYNGI 318
           + NDVF +     K G+ETF   TGI  Q   E R +   +V+N    N KD E+K   +
Sbjct: 96  VGNDVFAVAEAQCKKGEETF---TGIASQLLTERRDNTPEKVLN----NPKD-ETKL--L 145

Query: 319 QDNINETI 326
           +++I+E +
Sbjct: 146 EESISEKV 153



>EAY09549.1 on XP_806591   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 272

 Score = 26.6 bits (57), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 8/89 (8%)

Query: 238 LILLDRTVDLASGLHHSRLYQS----LANDVFGITRNAIKVGKETFDLDTGIDQFWAENR 293
           L+L   TV   SG  H+   +S    LA ++     N  +V       +TG+ + +A   
Sbjct: 49  LLLFFVTVCCGSGGAHAVKSKSGAVQLAQEIDFFVPNKTQVLSRHGTGETGVKEAFASPS 108

Query: 294 LSNTGEVMNTVSKNVKDFESKYNGIQDNI 322
           L   GEVM  +++ +  FE  YNG ++N+
Sbjct: 109 LVRAGEVMVAIAEGL--FE--YNGHENNL 133



>EAY09549.1 on XP_827758  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 487

 Score = 26.2 bits (56), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%)

Query: 285 IDQFWAENRLSNTGEVMNTVSKNVKDF---ESKYNGIQDNINETISDLQNLQHLRT 337
           +D F AE        V NT+ K++KD    +S   G  +N  ETI+D + L +  T
Sbjct: 331 VDSFMAETFGKEPTIVKNTIVKDLKDLKPPKSAVGGNGENKLETINDPKELANAAT 386



>EAY09549.1 on XP_844158  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 490

 Score = 25.8 bits (55), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 418 FLEQLKQFRASNQSSQSVLGKFLRKVASG-SGEIEEK 453
           F  QLK  + S     ++LGKF    + G +GEI EK
Sbjct: 279 FFNQLKISKGSTSGRPTLLGKFGTSFSVGCTGEITEK 315




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09556.1 hypothetical protein TVAG_276290 [Trichomonas
vaginalis G3]
         (960 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09558.1 1,4-alpha-glucan branching enzyme IIB,
chloroplast precursor, putative [Trichomonas vaginalis G3]
         (671 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_821991   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   6.2  

>EAY09558.1 on XP_821991   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 882

 Score = 26.6 bits (57), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 9/74 (12%)

Query: 358 VDREAVTYLMLANTVIHMVNPNAISIAEDVSGMVGLARSIEDGGMG--------FDYRLG 409
           V+ + V +L L +   H+V+   +S  +D +    L RS+E+G  G        ++ + G
Sbjct: 387 VNEKGVLHLWLTDNT-HIVDIGPVSGDDDAAASSLLYRSVENGDQGNKEELIALYEKKKG 445

Query: 410 MSSPDMWIKMLKEQ 423
            SS  M   +L EQ
Sbjct: 446 ESSSGMVSVLLTEQ 459




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09570.1 ankyrin repeat protein, putative [Trichomonas
vaginalis G3]
         (291 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_815842   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   0.37 
XP_001351515  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   2.8  
XP_816764   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   3.6  
XP_812988   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   4.2  
XP_001348165  RESA  (Others)  [plasmodium falciparum]                  25   4.6  
XP_821677   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   5.0  
XP_966305  PfEMP1  (Establishment)  [Plasmodium falciparum]            25   6.4  

>EAY09570.1 on XP_815842   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 894

 Score = 28.9 bits (63), Expect = 0.37,   Method: Composition-based stats.
 Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 12/95 (12%)

Query: 157 LSHGANINDKNKNGQTTLHIAAMHNNKETAEVLILHGANINEKNKAGETALHYAAMYNNK 216
           L H AN N       T +   ++H   +   + ++ GA +N+   AG + L +   Y+NK
Sbjct: 568 LYHFANYN------FTLVATVSIHGEPKEGTIPVM-GAKMND---AGNSIL-FGLSYDNK 616

Query: 217 ETAEVLILHGANINEKDEAGETALHIAA-MQNSKK 250
           E    L+  G N NE     E   H+   ++NS +
Sbjct: 617 EKKWQLLCGGGNPNELSSTSEKTHHVVILLRNSSQ 651




 Score = 24.6 bits (52), Expect = 9.0,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 25/64 (39%), Gaps = 4/64 (6%)

Query: 160 GANINDKNKNGQTTLHIAAMHNNKETAEVLILHGANINEKNKAGETALHYAAMYNNKETA 219
           GA +ND    G + L     ++NKE    L+  G N NE +   E   H   +  N    
Sbjct: 597 GAKMNDA---GNSIL-FGLSYDNKEKKWQLLCGGGNPNELSSTSEKTHHVVILLRNSSQG 652

Query: 220 EVLI 223
              +
Sbjct: 653 SAYV 656



>EAY09570.1 on XP_001351515  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2181

 Score = 26.2 bits (56), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 15/57 (26%), Positives = 28/57 (49%)

Query: 13  EGFNKNQKLESNLYPSHYKGYSLLELCCYYGAVDCFKFLRTKFSSEITEKCLEFSFL 69
           E F + +K +     ++ +G +  +  C    +DC K +R K+   I  +C + SFL
Sbjct: 314 EDFCRKRKHKLKDVKTNCRGENGTDRYCSGNGLDCTKTIRAKYIYAIGSECTKCSFL 370



>EAY09570.1 on XP_816764   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 868

 Score = 25.8 bits (55), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 3/62 (4%)

Query: 148 NIPSFLKYLLSHGANINDKNKNGQTTLHIAAMHNNKETAEVLILHGANINEKNKAGETAL 207
            +P    ++   GA +ND+NKN   T+ +   +N     E+    G N  E N A ET  
Sbjct: 581 GVPKSGSHIPLMGAKMNDENKN---TVFLGLSYNGGGKWELSCGGGTNSQEHNSACETEK 637

Query: 208 HY 209
            Y
Sbjct: 638 TY 639



>EAY09570.1 on XP_812988   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 889

 Score = 25.4 bits (54), Expect = 4.2,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 11/89 (12%)

Query: 157 LSHGANINDKNKNGQTTLHIAAMHNNKETAEVLILHGANINEKNKAGETALHYAAMYNNK 216
           L H AN N       T +   ++H   +   + ++ GA +N+   AG + L +   Y+NK
Sbjct: 561 LYHFANYN------FTLVATVSIHGEPKEGTIPLM-GAKMND---AGNSIL-FGLSYDNK 609

Query: 217 ETAEVLILHGANINEKDEAGETALHIAAM 245
           E    L+  G N  E     E   H+  +
Sbjct: 610 EKKWQLLCGGGNPKELSSTSEKTHHVVIL 638



>EAY09570.1 on XP_001348165  RESA  (Others)  [plasmodium falciparum]
          Length = 1085

 Score = 25.4 bits (54), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 22/96 (22%), Positives = 42/96 (43%), Gaps = 8/96 (8%)

Query: 48  FKFLRTKFSSEITEKCLEFSFLGRNNEIMSECLKYQKPNYKCMEYAIISHNIDFVTFLMN 107
             F +  F+ E        + LG N + M++  +Y+  N     Y  I H  +F   +++
Sbjct: 113 LPFEKPTFTLESPPDIDHTNILGFNEKFMTDVNRYRYSN----NYEAIPHISEFNPLIVD 168

Query: 108 ----EYNLEIDLIDCGNYNNIESFLVYFDQTNDINK 139
               +YN ++D +     + I+     +D+  DINK
Sbjct: 169 KVLFDYNEKVDNLGRSGGDIIKKMQTLWDEIMDINK 204



>EAY09570.1 on XP_821677   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 861

 Score = 25.4 bits (54), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 4/56 (7%)

Query: 172 TTLHIAAMHNNKETAEVLILHGANINEKNKAGETALHYAAMYNNKETAEVLILHGA 227
           T L   ++H   E+   + L GA +N+  K     L Y    NNKE   +L+  G 
Sbjct: 564 TLLATVSIHGVPESGSHIPLIGAKMNDSEKTVLVGLSY----NNKEKKWILLCDGG 615



>EAY09570.1 on XP_966305  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3954

 Score = 25.0 bits (53), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 12/27 (44%), Positives = 13/27 (48%)

Query: 116  IDCGNYNNIESFLVYFDQTNDINKCFV 142
            I+C  Y NI    V  D  ND N  FV
Sbjct: 3108 IECSQYGNIPCRGVSHDDDNDWNSSFV 3134




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09578.1 AGC family protein kinase [Trichomonas
vaginalis G3]
         (437 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    75   6e-16
XP_815560   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   9.3  

>EAY09578.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 75.5 bits (184), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 91/199 (45%), Gaps = 40/199 (20%)

Query: 205 LSKMEYKMVIAQIAIALNYLHSIGIVYRDIKPENILIGADGYI-KLADFGLAKDIITDNK 263
           L+  + K  I Q+  A+NY HS GI++RDIKP N++I  +  I +L D+GLA+    + +
Sbjct: 144 LTIQDIKYYIYQLLKAMNYCHSQGIMHRDIKPHNVMIDHEKKILRLIDWGLAEFYHPEQE 203

Query: 264 TTSFCGTPKYIAPETIVGVP-YDQSVDWWSLGILTYQLIYHKFPFY--SQNVDAV----- 315
            +    T  Y  PE +V +  YD S+D WS+G +   +I+ K PF+    N D +     
Sbjct: 204 YSVRVATRYYKGPELLVDMRYYDYSLDIWSIGCMLAGIIFKKEPFFYGHDNYDQLVKIAK 263

Query: 316 ---------------------YRMILNKKVEFP----------DSASPEEIDFISILLEK 344
                                Y+ IL    + P             SPE +D +  +L  
Sbjct: 264 VLGTEDLHRYFEKYGLKFAPAYQEILGNHSKKPWTKFVHHENQHLVSPEVMDLLDRMLVY 323

Query: 345 DPKKRAGYNEVSQHPFFSE 363
           D  KR    E  +HPFF+E
Sbjct: 324 DHTKRITPLEAMEHPFFNE 342



>EAY09578.1 on XP_815560   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 922

 Score = 25.0 bits (53), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 14/79 (17%)

Query: 272 KYIAPETIVGVPYDQSVDW-----WSLGILT-YQL--IYHKFPFYSQNVDAVY---RMIL 320
           K +   T++G+ YD++++W     W    LT ++L   YH        V +VY   + +L
Sbjct: 572 KRMGTTTLLGLSYDKNMEWSVEHGWYQRYLTKWELDKTYHVVLKMHNGVGSVYVDGKSLL 631

Query: 321 NKKVEFPDSASPEEIDFIS 339
           N  +  P   S EE+D IS
Sbjct: 632 NLALPRP---SDEELDEIS 647




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09583.1 hypothetical protein TVAG_056270 [Trichomonas
vaginalis G3]
         (103 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_805259   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   1.3  
XP_813585   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   1.9  
XP_001349740  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   3.4  

>EAY09583.1 on XP_805259   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 800

 Score = 24.6 bits (52), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 2/56 (3%)

Query: 12  SDGYDRDELL--PKSSKNYRILFDKSTLIHPNEEKIITIEISAESVNKITVSHDIS 65
           SDG   DE L    +  N   + D   L  PN   +  + I  ++V  I++SH+ +
Sbjct: 501 SDGTWNDEYLCLNATVTNATKVEDGFQLTEPNSRAVWPVNIPDDNVRHISLSHNFT 556



>EAY09583.1 on XP_813585   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 800

 Score = 24.3 bits (51), Expect = 1.9,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 2/56 (3%)

Query: 12  SDGYDRDELL--PKSSKNYRILFDKSTLIHPNEEKIITIEISAESVNKITVSHDIS 65
           SDG   DE L    + +N   + D   L  PN   +  + I   +V  I++SH+ +
Sbjct: 502 SDGTWNDEYLCLNATVRNATKVEDGFQLTEPNSRAVWPVNIPDGNVRHISLSHNFT 557



>EAY09583.1 on XP_001349740  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3346

 Score = 23.5 bits (49), Expect = 3.4,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 7    TTIVDSDGYDRDELLPKSSKNY 28
            T   D DG+D DE+ PK   ++
Sbjct: 1857 TNQCDDDGFDCDEMCPKKDGSF 1878




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09585.1 hypothetical protein TVAG_056290 [Trichomonas
vaginalis G3]
         (578 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001350935  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   5.0  

>EAY09585.1 on XP_001350935  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2268

 Score = 26.6 bits (57), Expect = 5.0,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 43/98 (43%), Gaps = 13/98 (13%)

Query: 155  SSTIEAIPSPVKPSPQKVVQNSLETLTP--VRKQPETTRESPVTSPFTTPKKETHKDELR 212
            ++T   IPS   P+PQ +  +   TL    + +  ++ + + V + +T+    T+ +   
Sbjct: 1941 NTTASDIPSDNTPTPQPITDDEWNTLKDEFISQYLQSEQPNDVPNDYTSGNSSTNTN--- 1997

Query: 213  KQNESLLTVLNLKQTQYKERQYLSQEKDPELYPPQLYN 250
                    +  + +    E+ +++   D +LY  + YN
Sbjct: 1998 --------ITTMSRDNVDEKPFITSIHDRDLYTGEEYN 2027




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09595.1 hypothetical protein TVAG_056390 [Trichomonas
vaginalis G3]
         (86 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAZ15656  Cathepsin C3  (Protease)  [Toxoplasma gondii]                23   3.0  
XP_001351877  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   3.2  
XP_001609101  variant erythrocyte surface antigen-1, alpha subun...    23   4.1  
XP_001609163  variant erythrocyte surface antigen-1, alpha subun...    23   4.3  

>EAY09595.1 on AAZ15656  Cathepsin C3  (Protease)  [Toxoplasma gondii]
          Length = 255

 Score = 23.1 bits (48), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 10/31 (32%), Positives = 13/31 (41%)

Query: 45  DYGSRRQYYYLADALECEPDANESIQEFIYD 75
           D   R  + YLA  L  +PD        +YD
Sbjct: 91  DMAPRNNWKYLAVTLPSKPDVPVGTWTMVYD 121



>EAY09595.1 on XP_001351877  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2270

 Score = 23.1 bits (48), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 12/39 (30%), Positives = 21/39 (53%)

Query: 29  LQYALDHSEMFKSLVYDYGSRRQYYYLADALECEPDANE 67
           L+Y L+  E+FK +   YG+ ++   +   LE E   N+
Sbjct: 723 LKYVLNIDELFKDIKDGYGNAKELEGIKKLLEEEERKNQ 761



>EAY09595.1 on XP_001609101  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1359

 Score = 22.7 bits (47), Expect = 4.1,   Method: Composition-based stats.
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 3   GDVNMALKIIKNTYFINQRDING 25
           G+VN+AL  +K    +N  D+ G
Sbjct: 691 GNVNIALAAVKKVSGVNGSDLKG 713



>EAY09595.1 on XP_001609163  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1360

 Score = 22.7 bits (47), Expect = 4.3,   Method: Composition-based stats.
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 3   GDVNMALKIIKNTYFINQRDING 25
           G+VN+AL  +K    +N  D+ G
Sbjct: 691 GNVNIALAAVKKVSGVNGSDLKG 713




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09598.1 Leucine Rich Repeat family protein
[Trichomonas vaginalis G3]
         (686 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001349438  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   1.7  
XP_001347690  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   2.9  
XP_001349033  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   3.5  
XP_001351564  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   3.5  
XP_001351437  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   3.8  
XP_001352242  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   3.9  
XP_001349512  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   5.7  
XP_001351563  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   6.0  
XP_809179   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   6.4  
XP_001707641  CWP3  (Others)  [Giardia duodenalis]                     26   7.3  
XP_812152   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   8.6  

>EAY09598.1 on XP_001349438  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2265

 Score = 28.5 bits (62), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 8/84 (9%)

Query: 454 ADIEKLIKSNQKLRKERKENKIKREVQSTKDVDARLHLTRQEISEER-EQIQSYSDDLVK 512
           ADI  +++     R  +K  KIK E +  K ++ +L    + I +E  E+++S +DD + 
Sbjct: 192 ADIGDIVRGRDLYRGNKK--KIKTETERDK-LEQKLKEIFKNIKKENNEKLKSLTDDQI- 247

Query: 513 AKEEFKTASESRNTTIKALTTKFD 536
            +E + TA  +R+T  KA+T K D
Sbjct: 248 -REYWWTA--NRHTVWKAITCKAD 268




 Score = 26.2 bits (56), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 3/48 (6%)

Query: 599  QKTNEMEISDVIKKLLEAKQKYLDAKEILLEAWNTSHVFVTSGHDTAT 646
            +K N+    D+ +KL   K KY D K + LE  NTS    TS   + T
Sbjct: 1182 EKVNDANGDDLFQKL---KDKYSDYKTVTLEEDNTSSAMSTSPRTSET 1226



>EAY09598.1 on XP_001347690  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2215

 Score = 27.7 bits (60), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 8/52 (15%)

Query: 592  ENKLFETQKTNEMEI--------SDVIKKLLEAKQKYLDAKEILLEAWNTSH 635
            EN+LF T    +  I        SD I   LE   K+LD    + E W   H
Sbjct: 2047 ENELFGTNHVKQTSIHSVAKLTNSDPIHNQLELFHKWLDRHRDMCEKWENHH 2098



>EAY09598.1 on XP_001349033  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2064

 Score = 27.3 bits (59), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 8/52 (15%)

Query: 592  ENKLFETQKTNEMEI--------SDVIKKLLEAKQKYLDAKEILLEAWNTSH 635
            EN+LF T    +  I        SD I   LE   K+LD    + E W   H
Sbjct: 1896 ENELFGTNHVKQTSIHSVAKLTNSDPIHNQLELFHKWLDRHRNMCEKWENHH 1947



>EAY09598.1 on XP_001351564  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2207

 Score = 27.3 bits (59), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 8/52 (15%)

Query: 592  ENKLFETQKTNEMEI--------SDVIKKLLEAKQKYLDAKEILLEAWNTSH 635
            EN+LF T    +  I        SD I   LE   K+LD    + E W   H
Sbjct: 2039 ENELFGTNHVKQTSIHSVAKNTNSDPIHNQLELFHKWLDRHRDMCEQWENHH 2090



>EAY09598.1 on XP_001351437  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2277

 Score = 27.3 bits (59), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 3/44 (6%)

Query: 624  KEILLEAWNTSHVFVTSGHDTATPKKTNRETTRNTKRSSRKKIS 667
            K I  E W    V    G++   PK+ NRET R  K   +  I+
Sbjct: 1510 KGIRKEQWKCGKV---CGYNVCKPKEGNRETVRGEKNDDKHIIT 1550



>EAY09598.1 on XP_001352242  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2264

 Score = 27.3 bits (59), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 3/72 (4%)

Query: 606 ISDVIKKLLEAKQKYLDA---KEILLEAWNTSHVFVTSGHDTATPKKTNRETTRNTKRSS 662
           + D++K  LE ++   DA   K +  + +    V  TSG D  TP +T    +   + + 
Sbjct: 884 VCDIVKTALENRENLQDACNLKYVKGKNYGWKCVPTTSGGDNNTPGETTGSESERAEPTR 943

Query: 663 RKKISGSDSKGK 674
            K+ + S   GK
Sbjct: 944 AKRAAPSSPSGK 955



>EAY09598.1 on XP_001349512  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2980

 Score = 26.6 bits (57), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 8/52 (15%)

Query: 592  ENKLFETQKTNEMEISDVIKKL--------LEAKQKYLDAKEILLEAWNTSH 635
            EN+LF T    +  I  V K +        LE   K+LD    + E W   H
Sbjct: 2790 ENELFGTNHVKQTSIHSVAKPISDDPIHNQLELFHKWLDRHRDMCEKWENHH 2841



>EAY09598.1 on XP_001351563  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2149

 Score = 26.6 bits (57), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 8/52 (15%)

Query: 592  ENKLFETQKTNEMEISDVIKKL--------LEAKQKYLDAKEILLEAWNTSH 635
            EN+LF T    +  I  V K +        LE   K+LD    + E W   H
Sbjct: 1957 ENELFGTNHVKQTSIHSVAKPISDDPLLNQLELFHKWLDRHRDMCEKWENHH 2008



>EAY09598.1 on XP_809179   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 853

 Score = 26.6 bits (57), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 13/30 (43%), Positives = 16/30 (53%)

Query: 172 GQSAAKELASTLSMNQVLSELDLSMAKITC 201
           G+   KELA+T    QVL E      K+TC
Sbjct: 135 GEQTRKELATTEVKTQVLEECSSEKEKVTC 164



>EAY09598.1 on XP_001707641  CWP3  (Others)  [Giardia duodenalis]
          Length = 247

 Score = 25.8 bits (55), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 4/40 (10%)

Query: 70  FLKIFDMSSSSIGPKATEVICSLILNHPHIRSINLSGNSI 109
           +L++ DM+ +S+     E IC+L      + S++L  NS+
Sbjct: 105 YLRVLDMTDTSLDGNIPECICAL----SKLHSLHLDNNSL 140



>EAY09598.1 on XP_812152   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 923

 Score = 26.2 bits (56), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 13/31 (41%), Positives = 16/31 (51%)

Query: 171 VGQSAAKELASTLSMNQVLSELDLSMAKITC 201
            G+   KELA+T    QVL E      K+TC
Sbjct: 134 TGEQRRKELATTEVKTQVLEECSSEKEKVTC 164




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09600.1 hypothetical protein TVAG_056440 [Trichomonas
vaginalis G3]
         (169 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001611897  variant erythrocyte surface antigen-1, alpha subun...    23   8.4  

>EAY09600.1 on XP_001611897  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1369

 Score = 23.5 bits (49), Expect = 8.4,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 17/41 (41%)

Query: 129 DKNAASKFGDTPLSVSNGPVREYLRSVGAKDSTAPPRRGFQ 169
           +K  ASK G TP S    P   +L   G      P   GF+
Sbjct: 910 EKWEASKAGSTPSSDEYPPAASHLGHCGGSGQCCPLPMGFR 950




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09601.1 hypothetical protein TVAG_056450 [Trichomonas
vaginalis G3]
         (335 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09602.1 hypothetical protein TVAG_056460 [Trichomonas
vaginalis G3]
         (424 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001350935  PfEMP1  (Establishment)  [Plasmodium falciparum]         30   0.35 
ABR92023  MSA-1  (Invasion)  [Babesia bovis]                           28   1.4  
ABR92025  MSA-1  (Invasion)  [Babesia bovis]                           27   1.4  
ABR92033  MSA-1  (Invasion)  [Babesia bovis]                           27   1.4  
ABR92032  MSA-1  (Invasion)  [Babesia bovis]                           27   1.4  
ABR92034  MSA-1  (Invasion)  [Babesia bovis]                           27   1.4  
XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 26   4.7  
XP_001350082  Rh2b  (Adhesin)  [Plasmodium falciparum]                 26   6.1  
XP_001609315  variant erythrocyte surface antigen-1, alpha subun...    25   7.9  
XP_001349437  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   8.0  

>EAY09602.1 on XP_001350935  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2268

 Score = 29.6 bits (65), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 8/121 (6%)

Query: 104  KILSNSINSIINQHNSLQDQFT-KDFSDYAEDVSKRLIEIRDEFLAVRKRKEEVIENTQY 162
            KI ++ I S+ N  + L  + + K+  D+A D+S  +    D F  +++ K +      Y
Sbjct: 1447 KISADDIPSLGNSTHKLDMRVSDKNAKDFAGDLS--VCADADIFTGIKEHKWKCRNVCGY 1504

Query: 163  LKRLCQVNERERQSLQTIVEQLNDQKAQIDASAQIDVDNFKQQYDKMHQETREFKQEALQ 222
            +     V + E  + +T   + NDQ   I A     V NF + Y+++ Q+    K+ + Q
Sbjct: 1505 V-----VCKPENGNTETTSGENNDQIITIRALVTHWVHNFLEDYNRIKQKISHCKENSEQ 1559

Query: 223  T 223
            T
Sbjct: 1560 T 1560



>EAY09602.1 on ABR92023  MSA-1  (Invasion)  [Babesia bovis]
          Length = 319

 Score = 27.7 bits (60), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 2/52 (3%)

Query: 35  QKQEIEIMKKDI--ADKDAQIRNLSEKCAEFSQACSDIHALIRDFEAVADQK 84
           +++ +E  KK +   +    +  ++  C EF    SD + L+  F+A A  K
Sbjct: 157 REKAVEYFKKHVYTGEHVVDVNGMAGVCKEFLSPASDFYKLVESFDAFAHAK 208



>EAY09602.1 on ABR92025  MSA-1  (Invasion)  [Babesia bovis]
          Length = 319

 Score = 27.3 bits (59), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 2/52 (3%)

Query: 35  QKQEIEIMKKDI--ADKDAQIRNLSEKCAEFSQACSDIHALIRDFEAVADQK 84
           +++ +E  KK +   +    +  ++  C EF    SD + L+  F+A A  K
Sbjct: 157 REKAVEYFKKHVYTGEHVVDVNGMAGVCKEFLSPASDFYKLVESFDAFAHAK 208



>EAY09602.1 on ABR92033  MSA-1  (Invasion)  [Babesia bovis]
          Length = 319

 Score = 27.3 bits (59), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 2/52 (3%)

Query: 35  QKQEIEIMKKDI--ADKDAQIRNLSEKCAEFSQACSDIHALIRDFEAVADQK 84
           +++ +E  KK +   +    +  ++  C EF    SD + L+  F+A A  K
Sbjct: 157 REKAVEYFKKHVYTGEHVVDVNGMAGVCKEFLSPASDFYKLVESFDAFAHAK 208



>EAY09602.1 on ABR92032  MSA-1  (Invasion)  [Babesia bovis]
          Length = 319

 Score = 27.3 bits (59), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 2/52 (3%)

Query: 35  QKQEIEIMKKDI--ADKDAQIRNLSEKCAEFSQACSDIHALIRDFEAVADQK 84
           +++ +E  KK +   +    +  ++  C EF    SD + L+  F+A A  K
Sbjct: 157 REKAVEYFKKHVYTGEHVVDVNGMAGVCKEFLSPASDFYKLVESFDAFAHAK 208



>EAY09602.1 on ABR92034  MSA-1  (Invasion)  [Babesia bovis]
          Length = 319

 Score = 27.3 bits (59), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 2/52 (3%)

Query: 35  QKQEIEIMKKDI--ADKDAQIRNLSEKCAEFSQACSDIHALIRDFEAVADQK 84
           +++ +E  KK +   +    +  ++  C EF    SD + L+  F+A A  K
Sbjct: 157 REKAVEYFKKHVYTGEHVVDVNGMAGVCKEFLSPASDFYKLVESFDAFAHAK 208



>EAY09602.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 26.2 bits (56), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 16/70 (22%), Positives = 39/70 (55%), Gaps = 2/70 (2%)

Query: 77   FEAVADQ-KFFSPEQASKNIFITHMEYTKILSNSINSIINQHNSLQDQFTKDFSDYAEDV 135
            FE + +   F   + +  N +  H++    +SN+I+ ++N+HNSL  +   + ++  E++
Sbjct: 2218 FEYIQNNYNFIKSDISIFNKYDDHIKVDNYISNNID-VVNKHNSLLSEHVINATNIIENI 2276

Query: 136  SKRLIEIRDE 145
               ++EI ++
Sbjct: 2277 MTSIVEINED 2286



>EAY09602.1 on XP_001350082  Rh2b  (Adhesin)  [Plasmodium falciparum]
          Length = 1115

 Score = 25.8 bits (55), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 16/70 (22%), Positives = 39/70 (55%), Gaps = 2/70 (2%)

Query: 77  FEAVADQ-KFFSPEQASKNIFITHMEYTKILSNSINSIINQHNSLQDQFTKDFSDYAEDV 135
           FE + +   F   + +  N +  H++    +SN+I+ ++N+HNSL  +   + ++  E++
Sbjct: 79  FEYIQNNYNFIKSDISIFNKYDDHIKVDNYISNNID-VVNKHNSLLSEHVINATNIIENI 137

Query: 136 SKRLIEIRDE 145
              ++EI ++
Sbjct: 138 MTSIVEINED 147



>EAY09602.1 on XP_001609315  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1338

 Score = 25.4 bits (54), Expect = 7.9,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 12/93 (12%)

Query: 268 ENTYKEYQHVMEEINRGKEHIKKHMKALDRQELENAQKVNKELRAYIESERNNDKMRYES 327
           EN   E +  ++E+  G    K ++       LENA+ + KE R Y     +N K +  +
Sbjct: 740 ENANNELKEKIKELTNGSGGGKGNLLGEVEGALENAKNIEKE-RDY-----SNAKDKISA 793

Query: 328 QVKRNKELERTIQEHLDEQNMLKQYLQQIDKKM 360
            + +  E+ + + +      + KQY +++  KM
Sbjct: 794 AIHKVLEVLKILTK------LAKQYEEELKDKM 820



>EAY09602.1 on XP_001349437  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2231

 Score = 25.4 bits (54), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)

Query: 319 NNDKMRYESQVKRNKELE-RTIQEHLDEQNMLKQ 351
           NND   +ES VK+ KE E + I++H  +Q  +KQ
Sbjct: 664 NNDCDCFESWVKQKKEKEWKPIKDHFGKQEDIKQ 697




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09603.1 hypothetical protein TVAG_056470 [Trichomonas
vaginalis G3]
         (561 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAL38218  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   30   0.65 
AAL38220  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   29   0.69 
AAL38222  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   29   0.72 
AAL38219  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   29   0.79 
XP_828092  VSG  (Establishment)  [Trypanosoma brucei]                  28   1.1  
AAL38221  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   27   2.8  
XP_815166   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   6.9  
XP_812607   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   8.2  
XP_001352240  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   9.3  

>EAY09603.1 on AAL38218  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2977

 Score = 29.6 bits (65), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 128/309 (41%), Gaps = 53/309 (17%)

Query: 114  NLDTRYEEIQDELTNFRSQFTETIASVNNLSSSKEQL--EDFISGSERIEPDENLQ-SIK 170
            NL    E+I++++T+ + +    +  VN  S +  QL   + + G+E+IE  +NL+ S  
Sbjct: 1633 NLLINIEKIKNDITHIKEKTNIYMIDVNK-SKNNAQLYFHNTLRGNEKIEYLKNLKNSTN 1691

Query: 171  QQIN--------EFSKGISSITKKTAKLQMKQQFYSTTSSKNSTQINDLDLRIQDLTSQI 222
            QQI         E  + +  I  +T K       Y     KN   I D + +I D+   +
Sbjct: 1692 QQITLQELKQVQENVEKVKDIYNQTIK-------YEEKIKKNYHIITDYENKINDI---L 1741

Query: 223  HESMNSSIQTRNSFRNSQTEQ--KTIN---FDE-LQLEKNKLVSSLEEGVQKYRQFSNDY 276
            H S    I   +S    QT+Q    IN   F+E ++  K K+    E+   K+     D 
Sbjct: 1742 HNSFIKQINMESSNNKKQTKQIIDIINDKTFEEHIKTSKTKINMLKEQSQMKHI----DK 1797

Query: 277  KLLKSQITNLNIKLNKTRNDLSETAEAIKSLSKAAH----EASEKFKSYYAVTLEKVCQM 332
             LL  Q   L + +N T N+L      I S+    H    EA++ F  +  +  + V  +
Sbjct: 1798 TLLNEQALKLFVDINSTNNNLDNMLSEINSIQNNIHTYIQEANKSFDKFKIICDQNVNDL 1857

Query: 333  KLELSTMQTEKASCKSDLQRE--EENLKKNRKL---------------LSENIENFPIYL 375
              +LS       +   +LQ E    NL+KN  L               L  NI N    L
Sbjct: 1858 LNKLSLGDLNYMNHLKNLQNEIRNMNLEKNFMLDKSKKIDEEEKKLDILKVNISNINNSL 1917

Query: 376  DIIDKYYHE 384
            D + KYY E
Sbjct: 1918 DKLKKYYEE 1926



>EAY09603.1 on AAL38220  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2957

 Score = 29.3 bits (64), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 128/309 (41%), Gaps = 53/309 (17%)

Query: 114  NLDTRYEEIQDELTNFRSQFTETIASVNNLSSSKEQL--EDFISGSERIEPDENLQ-SIK 170
            NL    E+I++++T+ + +    +  VN  S +  QL   + + G+E+IE  +NL+ S  
Sbjct: 1623 NLLINIEKIKNDITHIKEKTNIYMIDVNK-SKNNAQLYFHNTLRGNEKIEYLKNLKNSTN 1681

Query: 171  QQIN--------EFSKGISSITKKTAKLQMKQQFYSTTSSKNSTQINDLDLRIQDLTSQI 222
            QQI         E  + +  I  +T K       Y     KN   I D + +I D+   +
Sbjct: 1682 QQITLQELKQVQENVEKVKDIYNQTIK-------YEEKIKKNYHIITDYENKINDI---L 1731

Query: 223  HESMNSSIQTRNSFRNSQTEQ--KTIN---FDE-LQLEKNKLVSSLEEGVQKYRQFSNDY 276
            H S    I   +S    QT+Q    IN   F+E ++  K K+    E+   K+     D 
Sbjct: 1732 HNSFIKQINMESSNNKKQTKQIIDIINDKTFEEHIKTSKTKINMLKEQSQMKHI----DK 1787

Query: 277  KLLKSQITNLNIKLNKTRNDLSETAEAIKSLSKAAH----EASEKFKSYYAVTLEKVCQM 332
             LL  Q   L + +N T N+L      I S+    H    EA++ F  +  +  + V  +
Sbjct: 1788 TLLNEQALKLFVDINSTNNNLDNMLSEINSIQNNIHTYIQEANKSFDKFKIICDQNVNDL 1847

Query: 333  KLELSTMQTEKASCKSDLQRE--EENLKKNRKL---------------LSENIENFPIYL 375
              +LS       +   +LQ E    NL+KN  L               L  NI N    L
Sbjct: 1848 LNKLSLGDLNYMNHLKNLQNEIRNMNLEKNFMLDKSKKIDEEEKKLDILKVNISNINNSL 1907

Query: 376  DIIDKYYHE 384
            D + KYY E
Sbjct: 1908 DKLKKYYEE 1916



>EAY09603.1 on AAL38222  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2976

 Score = 29.3 bits (64), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 128/309 (41%), Gaps = 53/309 (17%)

Query: 114  NLDTRYEEIQDELTNFRSQFTETIASVNNLSSSKEQL--EDFISGSERIEPDENLQ-SIK 170
            NL    E+I++++T+ + +    +  VN  S +  QL   + + G+E+IE  +NL+ S  
Sbjct: 1636 NLLINIEKIKNDITHIKEKTNIYMIDVNK-SKNNAQLYFHNTLRGNEKIEYLKNLKNSTN 1694

Query: 171  QQIN--------EFSKGISSITKKTAKLQMKQQFYSTTSSKNSTQINDLDLRIQDLTSQI 222
            QQI         E  + +  I  +T K       Y     KN   I D + +I D+   +
Sbjct: 1695 QQITLQELKQVQENVEKVKDIYNQTIK-------YEEKIKKNYHIITDYENKINDI---L 1744

Query: 223  HESMNSSIQTRNSFRNSQTEQ--KTIN---FDE-LQLEKNKLVSSLEEGVQKYRQFSNDY 276
            H S    I   +S    QT+Q    IN   F+E ++  K K+    E+   K+     D 
Sbjct: 1745 HNSFIKQINMESSNNKKQTKQIIDIINDKTFEEHIKTSKTKINMLKEQSQMKHI----DK 1800

Query: 277  KLLKSQITNLNIKLNKTRNDLSETAEAIKSLSKAAH----EASEKFKSYYAVTLEKVCQM 332
             LL  Q   L + +N T N+L      I S+    H    EA++ F  +  +  + V  +
Sbjct: 1801 TLLNEQALKLFVDINSTNNNLDNMLSEINSIQNNIHTYIQEANKSFDKFKIICDQNVNDL 1860

Query: 333  KLELSTMQTEKASCKSDLQRE--EENLKKNRKL---------------LSENIENFPIYL 375
              +LS       +   +LQ E    NL+KN  L               L  NI N    L
Sbjct: 1861 LNKLSLGDLNYMNHLKNLQNEIRNMNLEKNFMLDKSKKIDEEEKKLDILKVNISNINNSL 1920

Query: 376  DIIDKYYHE 384
            D + KYY E
Sbjct: 1921 DKLKKYYEE 1929



>EAY09603.1 on AAL38219  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2969

 Score = 29.3 bits (64), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 128/309 (41%), Gaps = 53/309 (17%)

Query: 114  NLDTRYEEIQDELTNFRSQFTETIASVNNLSSSKEQL--EDFISGSERIEPDENLQ-SIK 170
            NL    E+I++++T+ + +    +  VN  S +  QL   + + G+E+IE  +NL+ S  
Sbjct: 1625 NLLINIEKIKNDITHIKEKTNIYMIDVNK-SKNNAQLYFHNTLRGNEKIEYLKNLKNSTN 1683

Query: 171  QQIN--------EFSKGISSITKKTAKLQMKQQFYSTTSSKNSTQINDLDLRIQDLTSQI 222
            QQI         E  + +  I  +T K       Y     KN   I D + +I D+   +
Sbjct: 1684 QQITLQELKQVQENVEKVKDIYNQTIK-------YEEEIKKNYHIITDYENKINDI---L 1733

Query: 223  HESMNSSIQTRNSFRNSQTEQ--KTIN---FDE-LQLEKNKLVSSLEEGVQKYRQFSNDY 276
            H S    I   +S    QT+Q    IN   F+E ++  K K+    E+   K+     D 
Sbjct: 1734 HNSFIKQINMESSNNKKQTKQIIDIINDKTFEEHIKTSKTKINMLKEQSQMKHI----DK 1789

Query: 277  KLLKSQITNLNIKLNKTRNDLSETAEAIKSLSKAAH----EASEKFKSYYAVTLEKVCQM 332
             LL  Q   L + +N T N+L      I S+    H    EA++ F  +  +  + V  +
Sbjct: 1790 TLLNEQALKLFVDINSTNNNLDNMLSEINSIQNNIHTYIQEANKSFDKFKIICDQNVNDL 1849

Query: 333  KLELSTMQTEKASCKSDLQRE--EENLKKNRKL---------------LSENIENFPIYL 375
              +LS       +   +LQ E    NL+KN  L               L  NI N    L
Sbjct: 1850 LNKLSLGDLNYMNHLKNLQNEIRNMNLEKNFMLDKSKKIDEEEKKLDILKVNISNINNSL 1909

Query: 376  DIIDKYYHE 384
            D + KYY E
Sbjct: 1910 DKLKKYYEE 1918



>EAY09603.1 on XP_828092  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 532

 Score = 28.5 bits (62), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 13/29 (44%), Positives = 19/29 (65%)

Query: 101 ALSKLYELDKEKQNLDTRYEEIQDELTNF 129
           A S L  L K+KQ L  R  ++QD+++NF
Sbjct: 35  AWSPLCTLSKDKQKLYNRANKLQDDISNF 63



>EAY09603.1 on AAL38221  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2965

 Score = 27.3 bits (59), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 81/311 (26%), Positives = 131/311 (42%), Gaps = 57/311 (18%)

Query: 114  NLDTRYEEIQDELTNFRSQFTETIASVNNLSSSKEQL--EDFISGSERIEPDENLQ-SIK 170
            NL    E+I++++T+ + +    +  VN  S +  QL   + + G+E+IE  +NL+ S  
Sbjct: 1629 NLLINIEKIKNDITHIKEKTNIYMIDVNK-SKNNAQLYFHNTLRGNEKIEYLKNLKNSTN 1687

Query: 171  QQIN--------EFSKGISSITKKTAKLQ--MKQQFYSTTSSKNSTQINDLDLRIQDLTS 220
            QQI         E  + +  I  +T K +  +K  ++  T  +N  +IND+         
Sbjct: 1688 QQITLQELKQVQENVEKVKDIYNQTIKYEEKIKTNYHIITDYEN--KINDI--------- 1736

Query: 221  QIHESMNSSIQTRNSFRNSQTEQ--KTIN---FDE-LQLEKNKLVSSLEEGVQKYRQFSN 274
             +H S    I   +S    QT+Q    IN   F+E ++  K K+    E+   K+     
Sbjct: 1737 -LHNSFIKQINMESSNNKKQTKQIIDIINDKTFEEHIKTSKTKINMLKEQSQMKHI---- 1791

Query: 275  DYKLLKSQITNLNIKLNKTRNDLSETAEAIKSLSKAAH----EASEKFKSYYAVTLEKVC 330
            D  LL  Q   L + +N T N+L      I S+    H    EA++ F  +  +  + V 
Sbjct: 1792 DKTLLNEQALKLFVDINSTNNNLDNMLSEINSIQNNIHTYIQEANKSFDKFKIICDQNVN 1851

Query: 331  QMKLELSTMQTEKASCKSDLQRE--EENLKKNRKL---------------LSENIENFPI 373
             +  +LS       +   +LQ E    NL+KN  L               L  NI N   
Sbjct: 1852 DLLNKLSLGDLNYMNHLKNLQNEIRNMNLEKNFMLDKSKKIDEEEKKLDILKVNISNINN 1911

Query: 374  YLDIIDKYYHE 384
             LD + KYY E
Sbjct: 1912 SLDKLKKYYEE 1922



>EAY09603.1 on XP_815166   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 894

 Score = 26.2 bits (56), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 10/78 (12%)

Query: 92  QKADQAISKALSKLYELDKEKQNLDTRYEEIQDELTNF----------RSQFTETIASVN 141
           +KAD+ +SK      E D+   N  +   ++ D L  F          R ++    A+VN
Sbjct: 489 KKADETVSKLCPSSAEKDESTDNACSPTVKVTDGLVGFLSGNFSGDTWRDEYLGVNATVN 548

Query: 142 NLSSSKEQLEDFISGSER 159
           N + + E  +  ++ +E+
Sbjct: 549 NKAGAAEGKKGEVTSTEK 566



>EAY09603.1 on XP_812607   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 957

 Score = 25.8 bits (55), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 17/66 (25%), Positives = 29/66 (43%)

Query: 66  DETIKSAWKEFQENQYYQTQQLKSLSQKADQAISKALSKLYELDKEKQNLDTRYEEIQDE 125
           D+T  S W      Q  + +++ +  +K D+ +SK      E D   +N  +   +I D 
Sbjct: 462 DKTSHSLWSVLLTAQLQRVKEVLATWKKVDETVSKLCLSSAEEDGSPENACSPTVKITDG 521

Query: 126 LTNFRS 131
           L  F S
Sbjct: 522 LVGFLS 527



>EAY09603.1 on XP_001352240  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 1315

 Score = 25.8 bits (55), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 25/131 (19%), Positives = 57/131 (43%), Gaps = 16/131 (12%)

Query: 14   MIIKRQLVMIGDELSEHVN----TYSQKRESVSHLYKKYKITEDEYRSRMMTLDRYDETI 69
            M I  + +  G+E+S ++N    T    +   +++Y    +  D   S    +D YDE +
Sbjct: 1075 MSIHDRNLYTGEEISYNINMSTNTMDDPKYVSNNVYSGIDLINDSLNSGNQPIDIYDEVL 1134

Query: 70   KSAWKEFQENQYYQTQQLKSLS-------QKADQAISKALSKLYELDKEKQNLDTRYEEI 122
            K      +EN+ + T  +K  S         +D AI+  ++  ++     +++  ++E  
Sbjct: 1135 KR-----KENELFGTNHVKQTSIHSVAKNTYSDDAITNKINLFHKWLDRHRDMCEKWENH 1189

Query: 123  QDELTNFRSQF 133
             + L   + ++
Sbjct: 1190 HERLAKLKEKW 1200




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09609.1 hypothetical protein TVAG_056530 [Trichomonas
vaginalis G3]
         (126 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001349207  EBA-175  (Adhesin)  [Plasmodium falciparum]              28   0.16 
XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]                 25   2.0  
AAY44839  MSA-1  (Invasion)  [Babesia bovis]                           23   5.0  

>EAY09609.1 on XP_001349207  EBA-175  (Adhesin)  [Plasmodium falciparum]
          Length = 1462

 Score = 28.1 bits (61), Expect = 0.16,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%)

Query: 64  EKLGREPTEEIINEI--GKRTEQNFIKMFTVIPEVPKGIKQILSELSKMPNV 113
           + +G   T++++ E   G R+E    + F V   +PKG  Q L +   +PN+
Sbjct: 797 QSVGENGTKDLLQEDLGGSRSEDEVTQEFGVNHGIPKGEDQTLGKSDAIPNI 848



>EAY09609.1 on XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]
          Length = 2112

 Score = 24.6 bits (52), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 32/70 (45%), Gaps = 2/70 (2%)

Query: 54   MDKKIIHHIVEKLGREPTEEIINEIGKRTEQNFIKMFTVIPEVPKGIKQILSELSK--MP 111
            ++KK +H   + +      E+I  +GK      +    ++  +  GI+Q   + ++   P
Sbjct: 1110 LEKKSVHQGFDDVNSYNKNELIKTLGKLENSTVLNKTNILDSLVYGIQQSFGKGNRENAP 1169

Query: 112  NVTIGLASGN 121
             VT+ L + N
Sbjct: 1170 KVTMLLTNSN 1179



>EAY09609.1 on AAY44839  MSA-1  (Invasion)  [Babesia bovis]
          Length = 274

 Score = 23.5 bits (49), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 5/51 (9%)

Query: 53  WMDKKIIHHIVEKLGREPTEEIINEIGKRTEQNFIKMFTVIPEVPKGIKQI 103
           + D K  H+++EKLG    + + +EI K    + + M+  I +  KG+K++
Sbjct: 44  FDDIKTFHNLMEKLG----DSVNDEISKIYAGDDL-MYLEIDKAKKGLKEM 89




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09611.1 hypothetical protein TVAG_056550 [Trichomonas
vaginalis G3]
         (962 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAW71454  Histo-aspartic protease  (Proteases)  [Plasmodium falc...    30   0.99 
AAW71455  Histo-aspartic protease  (Proteases)  [Plasmodium falc...    30   0.99 
AAW71456  Histo-aspartic protease  (Proteases)  [Plasmodium falc...    30   0.99 
AAW71457  Histo-aspartic protease  (Proteases)  [Plasmodium falc...    30   0.99 
AAW71458  Histo-aspartic protease  (Proteases)  [Plasmodium falc...    30   0.99 
XP_001349740  PfEMP1  (Establishment)  [Plasmodium falciparum]         29   1.5  
AAR88085  TbcatB  (Cysteine proteases)  [Trypanosoma brucei]           27   4.5  

>EAY09611.1 on AAW71454  Histo-aspartic protease  (Proteases)  [Plasmodium
           falciparum]
          Length = 451

 Score = 29.6 bits (65), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 10/42 (23%)

Query: 713 LSSRSSVREVPSEVFNSIIDYVQIFK----------CDNTKL 744
           L S +SV  VP+E FN  ++   +FK          C NTKL
Sbjct: 336 LDSATSVITVPTEFFNQFVESASVFKVPFLSLYVTTCGNTKL 377



>EAY09611.1 on AAW71455  Histo-aspartic protease  (Proteases)  [Plasmodium
           falciparum]
          Length = 451

 Score = 29.6 bits (65), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 10/42 (23%)

Query: 713 LSSRSSVREVPSEVFNSIIDYVQIFK----------CDNTKL 744
           L S +SV  VP+E FN  ++   +FK          C NTKL
Sbjct: 336 LDSATSVITVPTEFFNQFVESASVFKVPFLSLYVTTCGNTKL 377



>EAY09611.1 on AAW71456  Histo-aspartic protease  (Proteases)  [Plasmodium
           falciparum]
          Length = 451

 Score = 29.6 bits (65), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 10/42 (23%)

Query: 713 LSSRSSVREVPSEVFNSIIDYVQIFK----------CDNTKL 744
           L S +SV  VP+E FN  ++   +FK          C NTKL
Sbjct: 336 LDSATSVITVPTEFFNQFVESASVFKVPFLSLYVTTCGNTKL 377



>EAY09611.1 on AAW71457  Histo-aspartic protease  (Proteases)  [Plasmodium
           falciparum]
          Length = 451

 Score = 29.6 bits (65), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 10/42 (23%)

Query: 713 LSSRSSVREVPSEVFNSIIDYVQIFK----------CDNTKL 744
           L S +SV  VP+E FN  ++   +FK          C NTKL
Sbjct: 336 LDSATSVITVPTEFFNQFVESASVFKVPFLSLYVTTCGNTKL 377



>EAY09611.1 on AAW71458  Histo-aspartic protease  (Proteases)  [Plasmodium
           falciparum]
          Length = 451

 Score = 29.6 bits (65), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 10/42 (23%)

Query: 713 LSSRSSVREVPSEVFNSIIDYVQIFK----------CDNTKL 744
           L S +SV  VP+E FN  ++   +FK          C NTKL
Sbjct: 336 LDSATSVITVPTEFFNQFVESASVFKVPFLSLYVTTCGNTKL 377



>EAY09611.1 on XP_001349740  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3346

 Score = 29.3 bits (64), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 8/85 (9%)

Query: 148  DIRMAFFSSILTKLLRCNKFL------EGLLPILSKLSLNSVLQRQLSDPYADFKDFLTF 201
            ++R AF  S   +  R  ++       E L   L   ++    +RQ+   Y D++DFL F
Sbjct: 1285 NLRKAFIISAAAETFRSWQYYKSKNGGENLQTQLKDGTIPDDFKRQMFYTYGDYRDFL-F 1343

Query: 202  FEESRRKIGETLGF-KDIVILFNTG 225
              +  + +GE     K I ILF  G
Sbjct: 1344 GTDISKGLGEGTALEKQINILFPNG 1368



>EAY09611.1 on AAR88085  TbcatB  (Cysteine proteases)  [Trypanosoma brucei]
          Length = 340

 Score = 27.3 bits (59), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 11/36 (30%), Positives = 16/36 (44%)

Query: 617 WALMEIQFNDMIHRQTYLRGSMRISIDSISDLIDYN 652
           W    +Q  D   R+ + RG   ++ D   D I YN
Sbjct: 232 WTSYALQGEDDYMRELFFRGPFEVAFDVYEDFIAYN 267




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09613.1 hypothetical protein TVAG_056570 [Trichomonas
vaginalis G3]
         (1059 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAC37226  SBP1  (Others)  [Babesia bovis]                              28   2.9  
AAX07985  alpha-7.3 giardin  (Others)  [Giardia duodenalis]            27   4.2  
XP_817716   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   8.2  

>EAY09613.1 on AAC37226  SBP1  (Others)  [Babesia bovis]
          Length = 596

 Score = 28.1 bits (61), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 9/78 (11%)

Query: 45  SRLIHEN-----PTDFKKLVSILRNIRDCGEYTEFFALLESNDLPLDIFIPLCMKFITKE 99
           +RL HEN     P   K+L +IL  + +      FFA+ E+    + +    C  F   E
Sbjct: 467 NRLWHENVDIDMPVVQKRLSTILGYVTNYDPKHPFFAVSENI---VKVLNKSC-DFALPE 522

Query: 100 DILAQISSVLYGILLGYR 117
           D+  ++SS+  G + GY 
Sbjct: 523 DLAVELSSIESGKIFGYE 540



>EAY09613.1 on AAX07985  alpha-7.3 giardin  (Others)  [Giardia duodenalis]
          Length = 255

 Score = 27.3 bits (59), Expect = 4.2,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 19/42 (45%)

Query: 243 NQRVQKFREKIIESTMYSLQGSDSTLTLICQHLTVRCPDRAA 284
           ++  +   +K IE  +      D  L L C + T+ CP R A
Sbjct: 190 SEAFENIAKKTIEQALIEAYKGDDELALCCCNATLHCPARGA 231



>EAY09613.1 on XP_817716   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 948

 Score = 26.9 bits (58), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 8/80 (10%)

Query: 861 KYIDHHMTVDTSHMRDSLTIIG----ICYQAIISRSSTSKSDNLNETESQELSSSQESRN 916
           K + H    D +H+ D   I G        A++ +S+ S +D+ NE    EL +  E + 
Sbjct: 413 KGVLHLWLTDNTHIVDIGPISGKDDDAAASALLYKSTGSGTDDNNE----ELIALYEKKG 468

Query: 917 DGRESIQKLLVIIQQQIIKV 936
           DG  S   + V++ +Q+ +V
Sbjct: 469 DGESSSGMVSVLLTEQLERV 488




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09617.1 hypothetical protein TVAG_056610 [Trichomonas
vaginalis G3]
         (83 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001350798  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   1.3  
CAD21456  ESAG-7  (Establishment)  [Trypanosoma brucei]                23   2.3  
CAD21872  ESAG-6  (Establishment)  [Trypanosoma brucei]                23   3.8  
XP_829790  VSG  (Establishment)  [Trypanosoma brucei]                  22   6.7  

>EAY09617.1 on XP_001350798  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2359

 Score = 24.3 bits (51), Expect = 1.3,   Method: Composition-based stats.
 Identities = 9/21 (42%), Positives = 13/21 (61%)

Query: 50   NKDAENNNGETALDNALNTQI 70
            NKD   +NGE  ++  LNT +
Sbjct: 2244 NKDNNKHNGENTINKTLNTDV 2264



>EAY09617.1 on CAD21456  ESAG-7  (Establishment)  [Trypanosoma brucei]
          Length = 338

 Score = 23.1 bits (48), Expect = 2.3,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 2/41 (4%)

Query: 29  LIFASKMGNFDIVKYLISVGANKDAENNNGETALDNALNTQ 69
            +FA   G     ++ ISVG N  AE NN +   D  +  +
Sbjct: 131 FVFAQAAGGSS--QFCISVGTNIPAEYNNLQECFDGTIGPE 169



>EAY09617.1 on CAD21872  ESAG-6  (Establishment)  [Trypanosoma brucei]
          Length = 400

 Score = 22.7 bits (47), Expect = 3.8,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 2/41 (4%)

Query: 29  LIFASKMGNFDIVKYLISVGANKDAENNNGETALDNALNTQ 69
            +FA   G     ++ ISVG N  AE NN +   D  +  +
Sbjct: 132 FVFAQAAGGSS--QFCISVGTNIPAEYNNLQECFDGIIGPE 170



>EAY09617.1 on XP_829790  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 468

 Score = 21.9 bits (45), Expect = 6.7,   Method: Composition-based stats.
 Identities = 7/15 (46%), Positives = 13/15 (86%)

Query: 49  ANKDAENNNGETALD 63
           AN++ E N+G+T++D
Sbjct: 446 ANQETEGNDGKTSID 460




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09621.1 hypothetical protein TVAG_056650 [Trichomonas
vaginalis G3]
         (391 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609101  variant erythrocyte surface antigen-1, alpha subun...    33   0.020
XP_001609163  variant erythrocyte surface antigen-1, alpha subun...    33   0.022
XP_820142   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   0.49 
XP_001609666  variant erythrocyte surface antigen-1, alpha subun...    29   0.56 
AAL38220  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   27   2.0  
XP_804613   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.9  
XP_812697   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   4.4  
XP_812514   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   4.8  
XP_816459   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   9.7  

>EAY09621.1 on XP_001609101  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1359

 Score = 33.5 bits (75), Expect = 0.020,   Method: Composition-based stats.
 Identities = 43/209 (20%), Positives = 90/209 (43%), Gaps = 32/209 (15%)

Query: 54  KKQDEEAAKLQELKNKLNELISEIESIDNENSQITLEAQNNQKKCDETKREAKETEIACN 113
           K+ D+ A  L+ L  K+ E++ ++      N+Q            +E ++      IA  
Sbjct: 656 KESDKLAGGLKTLLEKIGEVVVQLG-----NAQ------------EELEKSGGNVNIALA 698

Query: 114 LIHK----NNKQLDGRINSLKEGKHELKSKLLELTGTITDKQNEKTRLVEEINEISQSNK 169
            + K    N   L G +  + +    +  KL+E          EK + +EEI +  ++ K
Sbjct: 699 AVKKVSGVNGSDLKGVLEKVLDVVLGVVEKLVEGV-------KEKVKALEEIKKTLEAAK 751

Query: 170 NLLLQVSKTERNLQDKSVHLEGKRDTLKKSKSRSSFLASDIEKLRSDIKDSENSVVNETD 229
             L +  KT+  L+     LEG +  L  +K      +SDI+  ++ +  + + +     
Sbjct: 752 EKLEEAKKTQEALEAAKGELEGAKGALTTAKKAFPGSSSDIDPCKNIVSATIDGL---HK 808

Query: 230 SIRELQNTKQRLIEQIQRQKEE-NDKTFA 257
           +++ L++  Q+++E  ++   E  D  F+
Sbjct: 809 ALQLLKDAVQQIMEATRKDTTEFQDAIFS 837



>EAY09621.1 on XP_001609163  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1360

 Score = 33.5 bits (75), Expect = 0.022,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 53/106 (50%), Gaps = 4/106 (3%)

Query: 153 EKTRLVEEINEISQSNKNLLLQVSKTERNLQDKSVHLEGKRDTLKKSKSRSSFLASDIEK 212
           EK + +EEI +  ++ K  L +  KT+  L+     LEG +  L  +K      +SDI+ 
Sbjct: 735 EKVKALEEIKKTLEAAKEKLEEAKKTQEALEAAKGELEGAKGALTTAKKAFPGSSSDIDP 794

Query: 213 LRSDIKDSENSVVNETDSIRELQNTKQRLIEQIQRQKEE-NDKTFA 257
            ++ +  + + +     +++ L++  Q+++E  ++   E  D  F+
Sbjct: 795 CKNIVSATIDGL---HKALQLLKDAVQQIMEATRKDTTEFQDAIFS 837



>EAY09621.1 on XP_820142   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 861

 Score = 29.3 bits (64), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 8/62 (12%)

Query: 263 RKKIDDRNSAIKRLDIQIKGF-----SDTLNQEREQSAEISAELTKAATELAEKNVKFTE 317
           R   DD   A+K +   + GF     SD +   R++   ++A +TK   E  EK VKFT 
Sbjct: 484 RASTDDVCGAVK-ITAGLVGFLSGNFSDGI--WRDEYLGVNATVTKEGAEQVEKGVKFTG 540

Query: 318 LG 319
            G
Sbjct: 541 RG 542



>EAY09621.1 on XP_001609666  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1269

 Score = 28.9 bits (63), Expect = 0.56,   Method: Composition-based stats.
 Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 20/91 (21%)

Query: 56  QDEEAAKLQELKNKLNELISEIESIDNENSQITLEAQNNQ--KKCDETKREAKETEIACN 113
           +D  A KL+++  K+ E++ ++      N+Q  LE ++    +K  E  R+AKE      
Sbjct: 603 KDTLAEKLKDVLEKIGEVVVQLG-----NAQEALETKDKDVIEKVKEALRKAKEG----- 652

Query: 114 LIHKNNKQLDGRINSLKEGKHELKSKLLELT 144
                   L+   N LK+   E K KL ELT
Sbjct: 653 --------LETAKNGLKDKLEEAKKKLDELT 675




 Score = 26.6 bits (57), Expect = 3.5,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 39/70 (55%), Gaps = 3/70 (4%)

Query: 133 KHELKSKLLELTGTITDKQNEKTRLVEEINEISQSNKNLLLQVSKTERNLQ--DKSVHLE 190
           +H+ KS++ EL   +    + K  L E++ ++ +    +++Q+   +  L+  DK V +E
Sbjct: 582 EHDRKSRVKELKKILWKVPSGKDTLAEKLKDVLEKIGEVVVQLGNAQEALETKDKDV-IE 640

Query: 191 GKRDTLKKSK 200
             ++ L+K+K
Sbjct: 641 KVKEALRKAK 650



>EAY09621.1 on AAL38220  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2957

 Score = 27.3 bits (59), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 64/135 (47%), Gaps = 13/135 (9%)

Query: 182 LQDKSVHLEGKRDTLK---KSKSRSSFLASDIEKLRSDIKDS-----ENSVVNETDSIRE 233
           +Q    +LE  ++ L    K K    F  +++EK+  ++KDS     E  + ++ + IR 
Sbjct: 161 MQYDYAYLEATKEVLYLIPKDKDYHKFYKNELEKILFNLKDSLKLLREGYIQSKLEMIR- 219

Query: 234 LQNTKQRLIEQIQRQKEENDKTFAEINECRKKIDDRNSAIKRLDIQIKGFSDTLNQEREQ 293
             ++   ++ +  +    ND  F   NE +KK +D    I+  ++ I  + + L  E ++
Sbjct: 220 -IHSDIDILNEFHQGNIINDNYFN--NEIKKKKEDVEKYIREYNLYIYKYENQLKIEIQK 276

Query: 294 -SAEISAELTKAATE 307
            + E+S  L K+  E
Sbjct: 277 LTNEVSINLNKSTCE 291



>EAY09621.1 on XP_804613   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 881

 Score = 26.6 bits (57), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 20/96 (20%)

Query: 241 LIEQIQRQK------EENDKTFAEINEC--------RKKIDDRNSAIKRLDIQIKGF-SD 285
           L EQ+QR K      +E DK  +++  C        R   DD   A+K +   + GF S 
Sbjct: 459 LTEQLQRVKGVLTTWKEVDKRVSQL--CTSLIAQKERASTDDVCGAVK-ITAGLVGFLSG 515

Query: 286 TL--NQEREQSAEISAELTKAATELAEKNVKFTELG 319
               N  R++   ++A +TK   E  E  VKFT  G
Sbjct: 516 KFSENTWRDEYLGVNATVTKERAEEVENGVKFTGSG 551



>EAY09621.1 on XP_812697   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 911

 Score = 26.2 bits (56), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 14/27 (51%), Positives = 18/27 (66%)

Query: 131 EGKHELKSKLLELTGTITDKQNEKTRL 157
           EG   + SKLL LTG  T K+ +KT+L
Sbjct: 120 EGFTGIASKLLALTGEQTSKELDKTKL 146



>EAY09621.1 on XP_812514   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 925

 Score = 25.8 bits (55), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 4/64 (6%)

Query: 259 INECRKKIDDRNSAIKRLDIQIKGFSD---TLNQEREQSAEISAELTKAATELAEKNVKF 315
           I E  +  DD  SA+K +   + GF     + N  +++   ++A +TK      EK VKF
Sbjct: 488 IAEKDRSTDDVCSAVK-ITAGLVGFLSGKFSGNTWKDEYLGVNATVTKEGAVQVEKGVKF 546

Query: 316 TELG 319
           T  G
Sbjct: 547 TGSG 550



>EAY09621.1 on XP_816459   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 904

 Score = 25.0 bits (53), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 25/117 (21%), Positives = 53/117 (45%), Gaps = 16/117 (13%)

Query: 48  AISEEKKKQDEEAAKLQELKNKLNELISEIESIDNENSQITLEAQNNQKKCDETKREAKE 107
            ++E + K+D  +         +++L++E E  DNE  ++  EA+ + +  +E     +E
Sbjct: 109 VVAEAQCKKDGNSG----FSGIVSQLLTETE--DNEPKEVLKEAKKDTQVLEEVTSAKEE 162

Query: 108 TEI----------ACNLIHKNNKQLDGRINSLKEGKHELKSKLLELTGTITDKQNEK 154
             +            N+     K   G +   K G  ++KS++L + GT++  + EK
Sbjct: 163 KRVNVSRPTAVVEGSNIYMLVGKHSHGDLAECKAGTEKIKSEILLVKGTVSGDEAEK 219




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09622.1 Zinc finger motif, C2HC5-type family protein
[Trichomonas vaginalis G3]
         (180 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001349036  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   0.89 
XP_818519   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   0.97 
XP_001351435  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   2.7  
XP_001351514  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   3.8  
XP_001351513  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   3.8  
XP_001347288  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   7.1  
AAS67870  Leucyl aminopeptidase  (Others)  [Trypanosoma brucei]        23   8.5  

>EAY09622.1 on XP_001349036  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2192

 Score = 26.9 bits (58), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 11/25 (44%), Positives = 14/25 (56%)

Query: 67  NCGRVICRAEGERPCPYCGTPVFSD 91
           N  +   R+E  +PCPYCG    SD
Sbjct: 510 NSNKTFYRSEYCQPCPYCGMKKKSD 534



>EAY09622.1 on XP_818519   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 389

 Score = 26.6 bits (57), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 8/24 (33%), Positives = 15/24 (62%)

Query: 87  PVFSDETLENPDKMEYLAAQFQAL 110
           P+F+D   +N D ++Y+  +  AL
Sbjct: 33  PLFADGVFKNADTLQYMGGEVFAL 56



>EAY09622.1 on XP_001351435  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2209

 Score = 25.4 bits (54), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 11/32 (34%), Positives = 16/32 (50%)

Query: 55  YGTEHPAINNCMNCGRVICRAEGERPCPYCGT 86
           +  +H  INN         R++  +PCPYCG 
Sbjct: 483 FKDDHGDINNNNKDEGTFYRSKYCQPCPYCGV 514



>EAY09622.1 on XP_001351514  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2201

 Score = 24.6 bits (52), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 9/53 (16%)

Query: 36  QVTVNIPEKE---IDFNKECGCYGTEHPAINNCMNCGRVICRAEGERPCPYCG 85
           +V  N  EKE   IDF         +  +  N  +  +  CR +  +PCP CG
Sbjct: 465 EVCKNFKEKEEGKIDFKT------VKSSSAKNSDDSNKTFCRTKYCQPCPLCG 511



>EAY09622.1 on XP_001351513  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2152

 Score = 24.6 bits (52), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 9/53 (16%)

Query: 36  QVTVNIPEKE---IDFNKECGCYGTEHPAINNCMNCGRVICRAEGERPCPYCG 85
           +V  N  EKE   IDF         +  +  N  +  +  CR +  +PCP CG
Sbjct: 465 EVCKNFKEKEEGKIDFKT------VKSSSAKNSDDSNKTFCRTKYCQPCPLCG 511



>EAY09622.1 on XP_001347288  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2241

 Score = 23.9 bits (50), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 11/26 (42%), Positives = 13/26 (50%)

Query: 74  RAEGERPCPYCGTPVFSDETLENPDK 99
           R+E  +PCPYCG         EN  K
Sbjct: 483 RSEYCQPCPYCGVRKTKGNQWENKSK 508



>EAY09622.1 on AAS67870  Leucyl aminopeptidase  (Others)  [Trypanosoma brucei]
          Length = 671

 Score = 23.5 bits (49), Expect = 8.5,   Method: Composition-based stats.
 Identities = 10/14 (71%), Positives = 11/14 (78%)

Query: 16  RRAGKGNKSGKKKS 29
           RRA KGN  GKK+S
Sbjct: 656 RRAVKGNPKGKKRS 669




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09626.1 hypothetical protein TVAG_056700 [Trichomonas
vaginalis G3]
         (222 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_806556   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.40 
XP_821910   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.59 
XP_818399   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.62 
XP_810023   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   0.73 
XP_805038   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.1  
XP_817382   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.2  
XP_810286   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   1.6  
XP_001349031  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   2.0  
XP_809719   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   3.5  
XP_001351876  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   3.9  
XP_846274  VSG  (Establishment)  [Trypanosoma brucei]                  25   4.2  
XP_001608665  variant erythrocyte surface antigen-1, alpha subun...    25   4.4  
XP_966307  PfEMP1  (Establishment)  [Plasmodium falciparum]            25   4.8  
XP_001350409  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   4.9  
XP_001349030  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   5.6  
CAA96437  MIC2  (Invasion)  [Eimeria tenella]                          24   8.7  
XP_001350797  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   8.8  

>EAY09626.1 on XP_806556   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 844

 Score = 28.1 bits (61), Expect = 0.40,   Method: Composition-based stats.
 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 7/54 (12%)

Query: 83  APPSRLPPPQPV---QFQSPHQEKPRANMN---QTMTQSMPVKKTSEASRPQTA 130
           APP+++PP  PV     Q P  E    N        TQ +P   TS+ S  + A
Sbjct: 754 APPAKIPPEAPVGQTTLQQPQHEGKGQNATAEESATTQEVPA-TTSQGSVEKAA 806



>EAY09626.1 on XP_821910   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 853

 Score = 27.7 bits (60), Expect = 0.59,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 7/54 (12%)

Query: 83  APPSRLPPPQPVQ---FQSPHQEKPRANMN---QTMTQSMPVKKTSEASRPQTA 130
           APP+ +PP  PV+    Q P  E    N         Q +P   TS+ S  + A
Sbjct: 763 APPATIPPEAPVEQTTLQQPQHEGKGQNATAEESATAQELPA-NTSQGSVEKAA 815



>EAY09626.1 on XP_818399   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 953

 Score = 27.7 bits (60), Expect = 0.62,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 18/36 (50%)

Query: 89  PPPQPVQFQSPHQEKPRANMNQTMTQSMPVKKTSEA 124
           PPP+ ++  +P  E P     Q  T+  P++ +  A
Sbjct: 757 PPPEAIKQATPEAETPSGPGGQQQTEKDPLRTSENA 792



>EAY09626.1 on XP_810023   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 804

 Score = 27.3 bits (59), Expect = 0.73,   Method: Composition-based stats.
 Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 7/54 (12%)

Query: 83  APPSRLPPPQPV---QFQSPHQEKPRANMN---QTMTQSMPVKKTSEASRPQTA 130
           APP+ +PP  PV     Q P  E    N        TQ +P   TS+ S  + A
Sbjct: 714 APPATIPPEAPVGQTTLQQPQHEGKGQNATAEESATTQEVPA-NTSQGSVEKAA 766



>EAY09626.1 on XP_805038   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 927

 Score = 26.9 bits (58), Expect = 1.1,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 29/87 (33%), Gaps = 5/87 (5%)

Query: 67  IKKMTGRLNPRPSPQEAPPSRLPPPQPVQFQSPHQEKPRANMNQTMTQSMPVKKTSEASR 126
           ++    R+N    P   PP+   P Q  Q        P      T     P +  SE  +
Sbjct: 709 VESANDRVNTNTQPTVPPPATAGPQQTDQTTLNTSSVPSGGAPPT-----PAEPKSEEPK 763

Query: 127 PQTANPPGEKPKFVQDHEKMVASIRAA 153
           P  + P   KP   +  E   A   AA
Sbjct: 764 PAESRPEEPKPAESESEEPKPAEPNAA 790



>EAY09626.1 on XP_817382   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 836

 Score = 26.9 bits (58), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 7/54 (12%)

Query: 83  APPSRLPPPQPV---QFQSPHQEKPRANMN---QTMTQSMPVKKTSEASRPQTA 130
           APP+ +PP  PV     Q P  E    N        TQ +P   TS+ S  + A
Sbjct: 746 APPATIPPEAPVGQTTLQQPQHEGKGQNATAEESATTQEVPA-TTSQGSVEKAA 798



>EAY09626.1 on XP_810286   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 846

 Score = 26.2 bits (56), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 20/35 (57%)

Query: 90  PPQPVQFQSPHQEKPRANMNQTMTQSMPVKKTSEA 124
           PP+ ++  +P  E P + + Q  T+   +KK+ +A
Sbjct: 643 PPEAIKQATPEAETPSSLVGQQRTEQDSLKKSDDA 677



>EAY09626.1 on XP_001349031  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2275

 Score = 26.2 bits (56), Expect = 2.0,   Method: Composition-based stats.
 Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 5/36 (13%)

Query: 160 QKDLEEGKAVGPPPELPPIEEPPDLVQCPTCGRKMS 195
           QK LE+ K   PPPE     E PD  Q P   R  S
Sbjct: 809 QKCLEKRKQTCPPPE-----ESPDRSQTPPASRSDS 839



>EAY09626.1 on XP_809719   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 844

 Score = 25.4 bits (54), Expect = 3.5,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 7/55 (12%)

Query: 92  QPVQFQSPHQEKPRANMNQTMTQSMPVKKTSEASRPQTANPPGEKPKFVQDHEKM 146
           QP +  SP       ++ +  T +   KKT EA   Q+A+ P  K +  Q H  M
Sbjct: 732 QPTEAASP-------SVGEDKTATPLAKKTPEAPVVQSASQPFRKEREKQQHTAM 779



>EAY09626.1 on XP_001351876  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3164

 Score = 25.4 bits (54), Expect = 3.9,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 5/60 (8%)

Query: 79   SPQEAPPSRLPPPQP---VQFQSPHQEKPRANMNQTMTQSMPVKKTSEASRP--QTANPP 133
            + ++ P  +  P QP   +Q   P     RA++ +    S   +KT+  ++P  +   PP
Sbjct: 1974 TKKKTPSRKTQPSQPAREMQADEPASPSRRASLKEKAVASKKEEKTARPTKPPKKVEQPP 2033



>EAY09626.1 on XP_846274  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 547

 Score = 25.0 bits (53), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 12/49 (24%), Positives = 21/49 (42%)

Query: 130 ANPPGEKPKFVQDHEKMVASIRAARKYMKYQKDLEEGKAVGPPPELPPI 178
           A P    P +  D   +  S  AA  + + QK++E+G       E+  +
Sbjct: 285 AMPTAGSPAYTNDTAVLATSESAADLFGRVQKNIEDGTLSNTKTEITAM 333



>EAY09626.1 on XP_001608665  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1326

 Score = 25.0 bits (53), Expect = 4.4,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 14/82 (17%)

Query: 135 EKPKFVQDHEKMVASIRAARKYMKYQKDLEEGKAVGPPPELPPIEEPPDLVQCPTCGRKM 194
           EK K  +++ K+V  +   ++Y K   D+E+  ++   P            +CP C  K 
Sbjct: 830 EKQKTAKENMKVVLRLEIPQEYTKLLNDIEDLISICTSP------------KCPGC-TKH 876

Query: 195 SEEAARH-HFPVCARMNQGRMN 215
           SE+  R      C + +Q  M+
Sbjct: 877 SEKCGRQPQSKYCDKCHQQYMD 898



>EAY09626.1 on XP_966307  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2238

 Score = 25.0 bits (53), Expect = 4.8,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 4/39 (10%)

Query: 79   SPQEAPPSRLPPPQPVQFQSPHQEKPRANMNQTMTQSMP 117
            S ++ P  +LPPP   + + P    P+ N  +T  +  P
Sbjct: 1689 SERQTPEEKLPPPPAAKEEKP----PKQNAEKTKPKRSP 1723



>EAY09626.1 on XP_001350409  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2223

 Score = 25.0 bits (53), Expect = 4.9,   Method: Composition-based stats.
 Identities = 9/18 (50%), Positives = 11/18 (61%)

Query: 76   PRPSPQEAPPSRLPPPQP 93
            P  +P  APP+R P  QP
Sbjct: 1737 PAQAPDVAPPARAPADQP 1754



>EAY09626.1 on XP_001349030  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2215

 Score = 24.6 bits (52), Expect = 5.6,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 13/28 (46%)

Query: 64  LRHIKKMTGRLNPRPSPQEAPPSRLPPP 91
           L   K    + + +P P E P   LPPP
Sbjct: 786 LTDAKDCQQKCDKKPPPPETPARNLPPP 813



>EAY09626.1 on CAA96437  MIC2  (Invasion)  [Eimeria tenella]
          Length = 255

 Score = 23.9 bits (50), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 20/79 (25%)

Query: 8   NMSVDDVAKMIKDAGFGDANAQFFKDAEISGPTLAFITEEHLKEIGIKAIGPRLLILRHI 67
            +SVD+  K +  AG+  +   F          ++ + +E  K          ++ LR  
Sbjct: 67  GLSVDETIK-VTSAGWTKSERDFI---------VSLVADETRK----------VVQLRES 106

Query: 68  KKMTGRLNPRPSPQEAPPS 86
           +  +G   P P+P E PPS
Sbjct: 107 EGASGASGPGPAPAEKPPS 125



>EAY09626.1 on XP_001350797  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2287

 Score = 24.3 bits (51), Expect = 8.8,   Method: Composition-based stats.
 Identities = 15/40 (37%), Positives = 20/40 (50%)

Query: 1  MSGKDLENMSVDDVAKMIKDAGFGDANAQFFKDAEISGPT 40
          M GKD+ N  V   A+  K+A  GD N     ++E  G T
Sbjct: 19 MIGKDVYNEKVKSEAQTYKEALKGDLNTANGYNSETRGTT 58




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09627.1 hypothetical protein TVAG_056710 [Trichomonas
vaginalis G3]
         (246 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09628.1 hypothetical protein TVAG_056720 [Trichomonas
vaginalis G3]
         (215 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_813578   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.58 
XP_001351321  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   1.0  
XP_001351513  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   3.1  
XP_001351514  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   4.0  
XP_001610497  variant erythrocyte surface antigen-1, alpha subun...    24   8.5  

>EAY09628.1 on XP_813578   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 893

 Score = 27.7 bits (60), Expect = 0.58,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 13/55 (23%)

Query: 128 LKAQIVSLENETNKYKEEINTYKEQNNTFKDEISNLKKDNDQLKKEISTLNNKND 182
           + +Q+++LE++TNK  EEI             + + KKD   L+K++S    K D
Sbjct: 121 IASQLLNLEDKTNKEPEEI-------------LKDAKKDTQVLEKDVSQGKKKVD 162



>EAY09628.1 on XP_001351321  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3467

 Score = 26.9 bits (58), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 6/61 (9%)

Query: 139  TNKYKEEINTYKEQNNTFKDEISNLKKDNDQLKKEISTLNNKNDQLQRSIDDFAKIIQLI 198
             +KYK+EIN ++EQ    K +   L K     K  ++T NN  D  ++ + DF K  QL+
Sbjct: 1065 CDKYKDEINKWREQWTKIKGKYKTLYK--KATKPGVTTSNNPKD--EKDVVDFLK--QLL 1118

Query: 199  S 199
             
Sbjct: 1119 P 1119



>EAY09628.1 on XP_001351513  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2152

 Score = 25.4 bits (54), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 10/82 (12%)

Query: 122 HTEIQNLKAQIVSLENETNKYKEEINTYKEQNNTFKDEISNLKKDNDQLKKEIS-TLNN- 179
           H E++N     + LEN  N  KE++N  K  N+ F   ++++ KD+   KK++   L N 
Sbjct: 626 HKEVENAGGLCI-LEN--NDGKEKVNKQKTYNDFFYYWVAHMLKDSIHWKKKLEKCLKNG 682

Query: 180 -----KNDQLQRSIDDFAKIIQ 196
                KN++  R    F K ++
Sbjct: 683 TKTRCKNNKCNRECGCFQKWVE 704



>EAY09628.1 on XP_001351514  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2201

 Score = 25.0 bits (53), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 10/82 (12%)

Query: 122 HTEIQNLKAQIVSLENETNKYKEEINTYKEQNNTFKDEISNLKKDNDQLKKEIS-TLNN- 179
           H E++N     + LEN  N  KE++N  K  N+ F   ++++ KD+   KK++   L N 
Sbjct: 626 HKEVENAGGLCI-LEN--NDGKEKVNKQKTYNDFFYYWVAHMLKDSIHWKKKLEKCLKNG 682

Query: 180 -----KNDQLQRSIDDFAKIIQ 196
                KN++  R    F K ++
Sbjct: 683 TKTRCKNNKCNRECGCFQKWVE 704



>EAY09628.1 on XP_001610497  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1315

 Score = 24.3 bits (51), Expect = 8.5,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 26/51 (50%)

Query: 150 KEQNNTFKDEISNLKKDNDQLKKEISTLNNKNDQLQRSIDDFAKIIQLISS 200
           KE     K  +   K + D+ K+E+  +N K+ Q  ++I    K ++ +++
Sbjct: 692 KEAIEGVKTVLGKAKGELDKAKQELEQVNGKDGQTSQAISKAKKALEALTN 742




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09630.1 hypothetical protein TVAG_056740 [Trichomonas
vaginalis G3]
         (456 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_807433   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   8.2  
XP_810286   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   9.6  

>EAY09630.1 on XP_807433   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1042

 Score = 25.4 bits (54), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 6/73 (8%)

Query: 198 QNQLSDAKKELENKEAEYRSLTSRAQDRQSFEEKQRQDYQELLARVEKLRKDYQAESHSH 257
            + LSDA +++E   +   +LTS   D Q+ E ++R+D     A       D    SHS 
Sbjct: 885 HSTLSDASEDMEESSSHSATLTS---DEQTVEPEERKDTNPHTAVGASSGPD---SSHST 938

Query: 258 NQCQADLDAAKNE 270
                D   A +E
Sbjct: 939 EVASVDGATAAHE 951



>EAY09630.1 on XP_810286   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 846

 Score = 25.0 bits (53), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 15/61 (24%), Positives = 27/61 (44%)

Query: 284 NRKTQQLLGEEAENRRIHSNFAIEKVEADRKQQKEEKKTIELEKQVSVLQQNIANLNEQI 343
           N    +L+G      R+     +  VE  RK+   +  T E EK VS++  ++ + N   
Sbjct: 131 NESLTRLIGGGGSGVRMEDGTLVFPVEGTRKKTTNQVGTEEDEKTVSLIIHSLKDTNSWT 190

Query: 344 V 344
           +
Sbjct: 191 L 191




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09651.1 surface antigen BspA-like [Trichomonas
vaginalis G3]
         (139 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09652.1 surface antigen BspA-like [Trichomonas
vaginalis G3]
         (437 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_807986   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           31   0.18 
XP_828487  VSG  (Establishment)  [Trypanosoma brucei]                  29   0.50 
XP_001347692  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   8.7  

>EAY09652.1 on XP_807986   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1054

 Score = 30.8 bits (68), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 109 SLQSISFNPCDKNASINANA-FQGCSSITSLTLAEGIYSIDMYCFADC 155
           +L S+SFNP DK   ++  A  +GC   T +   E  Y  +++  A C
Sbjct: 279 ALLSMSFNPSDKKWELSYTATGKGCRDPTLVKWKENKYGEELFMMAHC 326



>EAY09652.1 on XP_828487  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 356

 Score = 28.9 bits (63), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 3/42 (7%)

Query: 185 FAASSSMTNISQYSFSGMKKLRDIQNIPSTIVEIGSNAFELT 226
           F A   M N++Q   +G++K+++++      + IGS   ELT
Sbjct: 31  FGALCGMINLAQ---AGLRKIKEVRETIKGTIRIGSRCLELT 69



>EAY09652.1 on XP_001347692  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2994

 Score = 25.4 bits (54), Expect = 8.7,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 31/65 (47%), Gaps = 1/65 (1%)

Query: 17   DTYNIPESVQYIKENAFKGNTILTKVVFQSNSNLKEIGKSAFEDCSLLSNINIPISTINF 76
            + Y+  ++ +Y+KE     +     +  + NSN  E   + ++D SL +  + P+S    
Sbjct: 1158 EDYSGKKASEYLKEKCINSSCDYM-LKLKDNSNYWEKPHTTYDDNSLQNKCSCPLSPCEI 1216

Query: 77   LDKAF 81
            +DK  
Sbjct: 1217 VDKTL 1221




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09668.1 hypothetical protein TVAG_060440 [Trichomonas
vaginalis G3]
         (1035 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAL15427  MSA-2b  (Invasion)  [Babesia bovis]                          33   0.086
AAL15425  MSA-2a1  (Invasion)  [Babesia bovis]                         33   0.094
ABA06450  MSA-2a1  (Invasion)  [Babesia bovis]                         32   0.19 
AAL15421  MSA-2a1  (Invasion)  [Babesia bovis]                         32   0.21 
ABA06441  MSA-2a/b  (Invasion)  [Babesia bovis]                        29   1.5  
ABA06442  MSA-2a/b  (Invasion)  [Babesia bovis]                        28   2.5  
ABA06438  MSA-2a/b  (Invasion)  [Babesia bovis]                        28   2.8  
XP_803378  VSG  (Establishment)  [Trypanosoma brucei]                  28   3.5  
ABA06451  MSA-2a2  (Invasion)  [Babesia bovis]                         27   3.7  
AAL15423  MSA-2b  (Invasion)  [Babesia bovis]                          27   3.7  
AAL38219  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   27   7.7  
AAL38222  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   27   8.0  
AAL38220  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   27   8.3  
AAL38218  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   27   8.3  
AAL38221  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   27   8.6  

>EAY09668.1 on AAL15427  MSA-2b  (Invasion)  [Babesia bovis]
          Length = 287

 Score = 32.7 bits (73), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 11/87 (12%)

Query: 737 QDQNKQMKKEIEKMKETNQLLNDKVEDLEEINQEMKENNEKMINNEKQKLEEQYKEEIQE 796
           QD ++  K  +E++     LL  K+  L E N  + +N   ++ N + K+ + YK+ I  
Sbjct: 106 QDTDQVFKSLLERV-----LLIKKM--LSEFNAFLNDNPPHLLTNGRDKMTKYYKKHISA 158

Query: 797 NESQINDLT----QTNEKLNNELQNMK 819
            +S + D T      N+ L++E   MK
Sbjct: 159 KDSDVKDYTFLVKFCNDYLDSESPFMK 185



>EAY09668.1 on AAL15425  MSA-2a1  (Invasion)  [Babesia bovis]
          Length = 311

 Score = 32.7 bits (73), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 6/117 (5%)

Query: 708 LKSDNQQLSLN-FDHLKDDYED---LKTENNKLQDQNKQMKKEIEKMKETNQLLNDKVED 763
           L SD+   +LN F ++ D + D    KT             +E++++  + +L    ++ 
Sbjct: 65  LPSDSSPDALNAFVYILDFFRDKVPFKTSLFDDDLLRNLDLQELDQIFNSLRLRVPLIKT 124

Query: 764 -LEEINQEMKENNEKMINNEKQKLEEQYKEEIQENESQINDLTQTNEKLNNELQNMK 819
            L   N  + +N   M+ NEK K+ + YKE I + + ++ D  +T  K  N+  + K
Sbjct: 125 KLSAFNAFLNDNPPHMLANEKGKMTKYYKEHICKEDGEVKDY-KTMVKFCNDFLDSK 180



>EAY09668.1 on ABA06450  MSA-2a1  (Invasion)  [Babesia bovis]
          Length = 316

 Score = 31.6 bits (70), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)

Query: 764 LEEINQEMKENNEKMINNEKQKLEEQYKEEIQENESQINDLTQTNEKLNNELQNMK 819
           L E N  + +N   M+ N K+K+ E YK+ I + + ++ D  +T  K  N+  + K
Sbjct: 126 LSEFNAFLNDNPPHMLTNGKEKMTEYYKKNISKEDGEVKDY-KTMVKFCNDFLDSK 180



>EAY09668.1 on AAL15421  MSA-2a1  (Invasion)  [Babesia bovis]
          Length = 316

 Score = 31.6 bits (70), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)

Query: 764 LEEINQEMKENNEKMINNEKQKLEEQYKEEIQENESQINDLTQTNEKLNNELQNMK 819
           L E N  + +N   M+ N K+K+ E YK+ I + + ++ D  +T  K  N+  + K
Sbjct: 126 LSEFNAFLNDNPPHMLTNGKEKMTEYYKKNISKEDGEVKDY-KTMVKFCNDFLDSK 180



>EAY09668.1 on ABA06441  MSA-2a/b  (Invasion)  [Babesia bovis]
          Length = 278

 Score = 28.9 bits (63), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 12/40 (30%), Positives = 23/40 (57%)

Query: 764 LEEINQEMKENNEKMINNEKQKLEEQYKEEIQENESQIND 803
           L E N  + +N   M+ N K K+ + YK+ I + ++++ D
Sbjct: 126 LTEFNAFLNDNPPHMLTNGKDKMNKYYKKHICKEDAEVKD 165



>EAY09668.1 on ABA06442  MSA-2a/b  (Invasion)  [Babesia bovis]
          Length = 267

 Score = 28.1 bits (61), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 11/40 (27%), Positives = 23/40 (57%)

Query: 764 LEEINQEMKENNEKMINNEKQKLEEQYKEEIQENESQIND 803
           L   N  + +N  +M+ NE  ++ + YK+ I + +S++ D
Sbjct: 126 LSAFNVFLNDNPPRMLANESGEMTDYYKKHICKEDSEVKD 165



>EAY09668.1 on ABA06438  MSA-2a/b  (Invasion)  [Babesia bovis]
          Length = 267

 Score = 27.7 bits (60), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 11/40 (27%), Positives = 23/40 (57%)

Query: 764 LEEINQEMKENNEKMINNEKQKLEEQYKEEIQENESQIND 803
           L   N  + +N  +M+ NE  ++ + YK+ I + +S++ D
Sbjct: 126 LSAFNVFLNDNPPRMLANESGEMTDYYKKHICKEDSEVKD 165



>EAY09668.1 on XP_803378  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 506

 Score = 27.7 bits (60), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 10/63 (15%)

Query: 422 VKELETVRTSLRTRDQ---VPKKCQKCKDYHRIENENNSLKAVVEKLEKSTFEA--HLSN 476
           + +LETV TSLRTR Q   + K+ Q      +IE     +KA  +  EK T     H SN
Sbjct: 340 IDKLETVETSLRTRQQNQDIQKQAQT-----KIETLKQLVKAAAKHAEKLTAPTTQHHSN 394

Query: 477 EKL 479
            KL
Sbjct: 395 PKL 397



>EAY09668.1 on ABA06451  MSA-2a2  (Invasion)  [Babesia bovis]
          Length = 287

 Score = 27.3 bits (59), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 19/88 (21%), Positives = 44/88 (50%), Gaps = 11/88 (12%)

Query: 736 LQDQNKQMKKEIEKMKETNQLLNDKVEDLEEINQEMKENNEKMINNEKQKLEEQYKEEIQ 795
           +QDQ++  K  +E++     +L        E N  + +N ++++ ++  ++ + YK+ I 
Sbjct: 105 IQDQDQIFKSLLERVPLIKTMLT-------EFNAFLNDNPQRLLADKNGEVTKYYKKHIS 157

Query: 796 ENESQINDLT----QTNEKLNNELQNMK 819
             ++ + D T      N+ L++E   MK
Sbjct: 158 AKDANVKDYTFLVKFCNDYLDSESPFMK 185



>EAY09668.1 on AAL15423  MSA-2b  (Invasion)  [Babesia bovis]
          Length = 287

 Score = 27.3 bits (59), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 19/88 (21%), Positives = 44/88 (50%), Gaps = 11/88 (12%)

Query: 736 LQDQNKQMKKEIEKMKETNQLLNDKVEDLEEINQEMKENNEKMINNEKQKLEEQYKEEIQ 795
           +QDQ++  K  +E++     +L        E N  + +N ++++ ++  ++ + YK+ I 
Sbjct: 105 IQDQDQIFKSLLERVPLIKTMLT-------EFNAFLNDNPQRLLADKNGEVTKYYKKHIS 157

Query: 796 ENESQINDLT----QTNEKLNNELQNMK 819
             ++ + D T      N+ L++E   MK
Sbjct: 158 AKDANVKDYTFLVKFCNDYLDSESPFMK 185



>EAY09668.1 on AAL38219  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2969

 Score = 26.9 bits (58), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 21/100 (21%), Positives = 47/100 (47%), Gaps = 12/100 (12%)

Query: 459  KAVVEKLEKSTFEAHLSNEKLKQELSDSQEKLKEQEKQILS---------LEEKNRDLQN 509
            K +++ +   TFE H+   K K  +   Q ++K  +K +L+         +   N +L N
Sbjct: 1753 KQIIDIINDKTFEEHIKTSKTKINMLKEQSQMKHIDKTLLNEQALKLFVDINSTNNNLDN 1812

Query: 510  DTKEMEA---KISSFVEKKDEDFMPPSVWTNCNFDDTLNR 546
               E+ +    I +++++ ++ F    +  + N +D LN+
Sbjct: 1813 MLSEINSIQNNIHTYIQEANKSFDKFKIICDQNVNDLLNK 1852



>EAY09668.1 on AAL38222  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2976

 Score = 26.9 bits (58), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 21/100 (21%), Positives = 47/100 (47%), Gaps = 12/100 (12%)

Query: 459  KAVVEKLEKSTFEAHLSNEKLKQELSDSQEKLKEQEKQILS---------LEEKNRDLQN 509
            K +++ +   TFE H+   K K  +   Q ++K  +K +L+         +   N +L N
Sbjct: 1764 KQIIDIINDKTFEEHIKTSKTKINMLKEQSQMKHIDKTLLNEQALKLFVDINSTNNNLDN 1823

Query: 510  DTKEMEA---KISSFVEKKDEDFMPPSVWTNCNFDDTLNR 546
               E+ +    I +++++ ++ F    +  + N +D LN+
Sbjct: 1824 MLSEINSIQNNIHTYIQEANKSFDKFKIICDQNVNDLLNK 1863



>EAY09668.1 on AAL38220  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2957

 Score = 26.9 bits (58), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 21/100 (21%), Positives = 47/100 (47%), Gaps = 12/100 (12%)

Query: 459  KAVVEKLEKSTFEAHLSNEKLKQELSDSQEKLKEQEKQILS---------LEEKNRDLQN 509
            K +++ +   TFE H+   K K  +   Q ++K  +K +L+         +   N +L N
Sbjct: 1751 KQIIDIINDKTFEEHIKTSKTKINMLKEQSQMKHIDKTLLNEQALKLFVDINSTNNNLDN 1810

Query: 510  DTKEMEA---KISSFVEKKDEDFMPPSVWTNCNFDDTLNR 546
               E+ +    I +++++ ++ F    +  + N +D LN+
Sbjct: 1811 MLSEINSIQNNIHTYIQEANKSFDKFKIICDQNVNDLLNK 1850



>EAY09668.1 on AAL38218  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2977

 Score = 26.9 bits (58), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 21/100 (21%), Positives = 47/100 (47%), Gaps = 12/100 (12%)

Query: 459  KAVVEKLEKSTFEAHLSNEKLKQELSDSQEKLKEQEKQILS---------LEEKNRDLQN 509
            K +++ +   TFE H+   K K  +   Q ++K  +K +L+         +   N +L N
Sbjct: 1761 KQIIDIINDKTFEEHIKTSKTKINMLKEQSQMKHIDKTLLNEQALKLFVDINSTNNNLDN 1820

Query: 510  DTKEMEA---KISSFVEKKDEDFMPPSVWTNCNFDDTLNR 546
               E+ +    I +++++ ++ F    +  + N +D LN+
Sbjct: 1821 MLSEINSIQNNIHTYIQEANKSFDKFKIICDQNVNDLLNK 1860



>EAY09668.1 on AAL38221  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2965

 Score = 26.9 bits (58), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 21/100 (21%), Positives = 47/100 (47%), Gaps = 12/100 (12%)

Query: 459  KAVVEKLEKSTFEAHLSNEKLKQELSDSQEKLKEQEKQILS---------LEEKNRDLQN 509
            K +++ +   TFE H+   K K  +   Q ++K  +K +L+         +   N +L N
Sbjct: 1757 KQIIDIINDKTFEEHIKTSKTKINMLKEQSQMKHIDKTLLNEQALKLFVDINSTNNNLDN 1816

Query: 510  DTKEMEA---KISSFVEKKDEDFMPPSVWTNCNFDDTLNR 546
               E+ +    I +++++ ++ F    +  + N +D LN+
Sbjct: 1817 MLSEINSIQNNIHTYIQEANKSFDKFKIICDQNVNDLLNK 1856




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09680.1 hypothetical protein TVAG_060560 [Trichomonas
vaginalis G3]
         (182 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_813587   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           32   0.023
XP_804820   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.12 
XP_807499   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   0.12 
XP_816523   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.23 
XP_807074   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   1.3  
XP_813123   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   1.3  
XP_807541   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   1.3  
XP_807431   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   1.6  
XP_819530   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   1.8  
AAW78177  TRAP  (Invasion)  [Plasmodium falciparum]                    25   2.0  
XP_817816   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   3.3  
XP_804330   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   3.4  
AAW78148  TRAP  (Invasion)  [Plasmodium falciparum]                    25   4.3  
XP_806228   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   4.6  
AAY44839  MSA-1  (Invasion)  [Babesia bovis]                           23   7.4  
XP_802771   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   7.6  
XP_810140   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   7.7  
XP_001349515  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   7.8  
XP_817877   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   8.2  

>EAY09680.1 on XP_813587   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 751

 Score = 31.6 bits (70), Expect = 0.023,   Method: Composition-based stats.
 Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 8/89 (8%)

Query: 64  VNTLSKP--PKLPTEEPKETEQVEKQAKIDNQQVKQAETKQNKSITKTPTKSPAKSSSKT 121
           VNT ++P  P   T  P++T+Q    A ++   V         +  K+    PA+S S+ 
Sbjct: 550 VNTNTQPTVPPPATAGPQQTDQ----ATLNTSSVPSGGAPSTPAEPKSEEPKPAESESEE 605

Query: 122 PNSKTPNQKQQTPR--TPRQSHNATPKTG 148
           P    PN    + R  T  Q  +AT   G
Sbjct: 606 PKPAEPNAATSSAREGTADQPASATSSDG 634



>EAY09680.1 on XP_804820   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 954

 Score = 29.6 bits (65), Expect = 0.12,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 40/81 (49%), Gaps = 3/81 (3%)

Query: 99  ETKQNKSITKTPTKSPAKSSSKTPNSKTPNQKQQTPRTPRQSHNATPKTGKFTEKTT-KF 157
           +T Q     +TP  +P  +++K PN++T    Q  P    ++  ++ + G+ TE+T  + 
Sbjct: 844 DTTQGNGSPQTPVGNPDAAATKAPNAET--MGQDGPTVTPEAGASSGENGEPTEETNGQE 901

Query: 158 KEIEDHLNSIKTKVMQSPPAN 178
           +EI    + + T  + S   N
Sbjct: 902 EEIHPQESELNTTALSSSLGN 922



>EAY09680.1 on XP_807499   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 834

 Score = 29.3 bits (64), Expect = 0.12,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)

Query: 103 NKSITKTPTKSPAKSSSKTPNSKTPNQKQQTP-RTPRQSHNATP-KTGKFTEKTTKFK 158
           +KS++ TP  S AKS+S TP          TP  +  +S ++TP  +G  +  +T F+
Sbjct: 723 SKSMSSTPVGSGAKSTSSTPVGSGAKSTSSTPVGSGAKSTSSTPVGSGAKSTSSTPFE 780




 Score = 28.1 bits (61), Expect = 0.29,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 103 NKSITKTPTKSPAKSSSKTPNSKTPNQKQQTP-RTPRQSHNATP 145
           +KS++ TP  S AKS+S TP          TP  +  +S ++TP
Sbjct: 699 SKSMSSTPVGSGAKSTSSTPVGSGSKSMSSTPVGSGAKSTSSTP 742




 Score = 25.4 bits (54), Expect = 2.1,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 104 KSITKTPTKSPAKSSSKTPNSKTPNQKQQTP-RTPRQSHNATP 145
           KS + TP  S +KS S TP          TP  +  +S ++TP
Sbjct: 688 KSTSSTPVGSGSKSMSSTPVGSGAKSTSSTPVGSGSKSMSSTP 730



>EAY09680.1 on XP_816523   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 892

 Score = 28.5 bits (62), Expect = 0.23,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 1/75 (1%)

Query: 74  PTEEPKETEQVEKQAKIDNQQVKQAETKQNKSITKTPTKSPAKSSSKTPNSKTPNQKQQT 133
           P+     +        +D+       T  + S   TP+ +   S+  TP++   +    T
Sbjct: 737 PSTTVDSSAHSTPSTTVDSSAHSTPSTPVDSSAHSTPSTTADSSAHSTPSTPADSSAHST 796

Query: 134 PRTP-RQSHNATPKT 147
           P TP   S ++TP T
Sbjct: 797 PSTPVDSSAHSTPST 811




 Score = 28.5 bits (62), Expect = 0.23,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 1/75 (1%)

Query: 74  PTEEPKETEQVEKQAKIDNQQVKQAETKQNKSITKTPTKSPAKSSSKTPNSKTPNQKQQT 133
           P+     +        +D+       T  + S   TP+     S+  TP++   +    T
Sbjct: 749 PSTTVDSSAHSTPSTPVDSSAHSTPSTTADSSAHSTPSTPADSSAHSTPSTPVDSSAHST 808

Query: 134 PRTPRQSH-NATPKT 147
           P TP  S  ++TP T
Sbjct: 809 PSTPADSSAHSTPST 823




 Score = 28.1 bits (61), Expect = 0.34,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 1/75 (1%)

Query: 74  PTEEPKETEQVEKQAKIDNQQVKQAETKQNKSITKTPTKSPAKSSSKTPNSKTPNQKQQT 133
           P+     +        +D+       T  + S   TP+ +   S+  TP++   +    T
Sbjct: 701 PSTPVDSSAHSTPSTTVDSSAHSTPSTPVDSSAHSTPSTTVDSSAHSTPSTTVDSSAHST 760

Query: 134 PRTP-RQSHNATPKT 147
           P TP   S ++TP T
Sbjct: 761 PSTPVDSSAHSTPST 775




 Score = 27.7 bits (60), Expect = 0.47,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 1/75 (1%)

Query: 74  PTEEPKETEQVEKQAKIDNQQVKQAETKQNKSITKTPTKSPAKSSSKTPNSKTPNQKQQT 133
           P+     +        +D+       T  + S   TP+     S+  TP++   +    T
Sbjct: 725 PSTPVDSSAHSTPSTTVDSSAHSTPSTTVDSSAHSTPSTPVDSSAHSTPSTTADSSAHST 784

Query: 134 PRTPRQSH-NATPKT 147
           P TP  S  ++TP T
Sbjct: 785 PSTPADSSAHSTPST 799




 Score = 26.6 bits (57), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 1/58 (1%)

Query: 91  DNQQVKQAETKQNKSITKTPTKSPAKSSSKTPNSKTPNQKQQTPRTP-RQSHNATPKT 147
           D+       T  + S   TP+     S+  TP++   +    TP TP   S ++TP T
Sbjct: 778 DSSAHSTPSTPADSSAHSTPSTPVDSSAHSTPSTPADSSAHSTPSTPVDSSAHSTPST 835




 Score = 26.2 bits (56), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 27/75 (36%), Gaps = 1/75 (1%)

Query: 74  PTEEPKETEQVEKQAKIDNQQVKQAETKQNKSITKTPTKSPAKSSSKTPNSKTPNQKQQT 133
           P+     +         D+       T  + S   TP+     S+  TP++   +    T
Sbjct: 773 PSTTADSSAHSTPSTPADSSAHSTPSTPVDSSAHSTPSTPADSSAHSTPSTPVDSSAHST 832

Query: 134 PRTP-RQSHNATPKT 147
           P TP   S + TP T
Sbjct: 833 PSTPVDSSAHGTPST 847




 Score = 25.4 bits (54), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 100 TKQNKSITKTPTKSPAKSSSKTPNSKTPNQKQQTPRTP-RQSHNATPKT 147
           T  + S   TP+     S+  TP++   +    TP TP   S ++TP T
Sbjct: 691 TPVDSSAHGTPSTPVDSSAHSTPSTTVDSSAHSTPSTPVDSSAHSTPST 739




 Score = 25.0 bits (53), Expect = 3.2,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 29/75 (38%), Gaps = 1/75 (1%)

Query: 74  PTEEPKETEQVEKQAKIDNQQVKQAETKQNKSITKTPTKSPAKSSSKTPNSKTPNQKQQT 133
           P+     +        +D+       T  + S   TP+ +   S+  TP++   +    T
Sbjct: 713 PSTTVDSSAHSTPSTPVDSSAHSTPSTTVDSSAHSTPSTTVDSSAHSTPSTPVDSSAHST 772

Query: 134 PRTPRQSH-NATPKT 147
           P T   S  ++TP T
Sbjct: 773 PSTTADSSAHSTPST 787




 Score = 25.0 bits (53), Expect = 3.4,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 23/64 (35%)

Query: 74  PTEEPKETEQVEKQAKIDNQQVKQAETKQNKSITKTPTKSPAKSSSKTPNSKTPNQKQQT 133
           P+     +        +D+       T  + S   TP+     S+  TP++   +    T
Sbjct: 785 PSTPADSSAHSTPSTPVDSSAHSTPSTPADSSAHSTPSTPVDSSAHSTPSTPVDSSAHGT 844

Query: 134 PRTP 137
           P TP
Sbjct: 845 PSTP 848




 Score = 24.6 bits (52), Expect = 3.8,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 1/50 (2%)

Query: 99  ETKQNKSITKTPTKSPAKSSSKTPNSKTPNQKQQTPRTP-RQSHNATPKT 147
           ++  + S   TP+    +S+   P++   +    TP TP   S ++TP T
Sbjct: 666 DSSSDSSAHGTPSTPADRSAHSAPSTPVDSSAHGTPSTPVDSSAHSTPST 715




 Score = 24.6 bits (52), Expect = 4.3,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 29/75 (38%), Gaps = 1/75 (1%)

Query: 74  PTEEPKETEQVEKQAKIDNQQVKQAETKQNKSITKTPTKSPAKSSSKTPNSKTPNQKQQT 133
           P+     +        +D+       T  + S   TP+ +   S+  TP++   +    T
Sbjct: 677 PSTPADRSAHSAPSTPVDSSAHGTPSTPVDSSAHSTPSTTVDSSAHSTPSTPVDSSAHST 736

Query: 134 PRTP-RQSHNATPKT 147
           P T    S ++TP T
Sbjct: 737 PSTTVDSSAHSTPST 751



>EAY09680.1 on XP_807074   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 822

 Score = 26.2 bits (56), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 105 SITKTPTKSPAKSSSKTPNSKTPNQKQQTP-RTPRQSHNATP 145
           S + TP  S A S+S TP     N    TP  +   S ++TP
Sbjct: 701 STSSTPVDSGANSTSSTPVDSGANSTSSTPVGSGANSTSSTP 742




 Score = 25.8 bits (55), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 105 SITKTPTKSPAKSSSKTPNSKTPNQKQQTP-RTPRQSHNATP 145
           S + TP  S A S+S TP     N    TP  +   S ++TP
Sbjct: 689 STSLTPVDSGANSTSSTPVDSGANSTSSTPVDSGANSTSSTP 730




 Score = 23.9 bits (50), Expect = 7.6,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)

Query: 109 TPTKSPAKSSSKTPNSKTPNQKQQTP-RTPRQSHNATP 145
           TP  S A S+S TP     N    TP  +   S ++TP
Sbjct: 681 TPVDSGANSTSLTPVDSGANSTSSTPVDSGANSTSSTP 718



>EAY09680.1 on XP_813123   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1048

 Score = 26.2 bits (56), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 10/66 (15%)

Query: 68   SKPPKLPTEEPKETEQVEKQAKIDNQQVKQAETKQ----------NKSITKTPTKSPAKS 117
            S  P     EP   E  +  ++ D  +V   + K+          NK+ T   TK P++S
Sbjct: 936  SPTPSKTDVEPTSAEDTDNISRTDGAEVSSEDGKEVPRTVDTAPENKNTTPGETKIPSES 995

Query: 118  SSKTPN 123
            ++ TP+
Sbjct: 996  NATTPS 1001



>EAY09680.1 on XP_807541   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 920

 Score = 26.2 bits (56), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 27/75 (36%)

Query: 63  AVNTLSKPPKLPTEEPKETEQVEKQAKIDNQQVKQAETKQNKSITKTPTKSPAKSSSKTP 122
           A NT    P      P++T+Q    A                +++++    PA S S+ P
Sbjct: 718 ATNTQPTVPSPVAAGPQQTDQATLSASSGASSGASGGAPSTPAVSESEEPKPAVSESEEP 777

Query: 123 NSKTPNQKQQTPRTP 137
            S     ++  P  P
Sbjct: 778 KSAESESEEPKPAEP 792



>EAY09680.1 on XP_807431   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 940

 Score = 25.8 bits (55), Expect = 1.6,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%)

Query: 90  IDNQQVKQAETKQNKSITKTPTKSPAKSSSKTPNSKTPNQKQQTPRTP-RQSHNATPKT 147
           +D+       T  + S   TP+ +   S+  TP++   +    TP TP   S + TP T
Sbjct: 741 VDSSAHGTPSTPVDSSAHGTPSTTVDSSAHATPSTPVDSSAHSTPSTPVDSSAHGTPST 799




 Score = 25.4 bits (54), Expect = 2.6,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 28/75 (37%), Gaps = 1/75 (1%)

Query: 74  PTEEPKETEQVEKQAKIDNQQVKQAETKQNKSITKTPTKSPAKSSSKTPNSKTPNQKQQT 133
           P+     +        +D+       T  + S   TP+     S+  TP++   +    T
Sbjct: 689 PSTPVDSSAHATPSTPVDSSAHSTPSTPVDSSAHGTPSTPVDSSAHGTPSTTVDSSAHGT 748

Query: 134 PRTP-RQSHNATPKT 147
           P TP   S + TP T
Sbjct: 749 PSTPVDSSAHGTPST 763




 Score = 25.4 bits (54), Expect = 2.7,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 28/75 (37%), Gaps = 1/75 (1%)

Query: 74  PTEEPKETEQVEKQAKIDNQQVKQAETKQNKSITKTPTKSPAKSSSKTPNSKTPNQKQQT 133
           P+     +        +D+       T  + S   TP+     S+  TP++   +    T
Sbjct: 761 PSTTVDSSAHATPSTPVDSSAHSTPSTPVDSSAHGTPSTPVDSSAHGTPSTPVDSSAHGT 820

Query: 134 PRTP-RQSHNATPKT 147
           P TP   S + TP T
Sbjct: 821 PSTPVDSSAHGTPST 835




 Score = 25.0 bits (53), Expect = 2.9,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%)

Query: 90  IDNQQVKQAETKQNKSITKTPTKSPAKSSSKTPNSKTPNQKQQTPRTP-RQSHNATPKT 147
           +D+       T  + S   TP+     S+  TP++   +    TP TP   S ++TP T
Sbjct: 729 VDSSAHGTPSTTVDSSAHGTPSTPVDSSAHGTPSTTVDSSAHATPSTPVDSSAHSTPST 787




 Score = 25.0 bits (53), Expect = 3.0,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 1/59 (1%)

Query: 90  IDNQQVKQAETKQNKSITKTPTKSPAKSSSKTPNSKTPNQKQQTPRTP-RQSHNATPKT 147
           +D+       T  + S   TP+     S+  TP++   +    TP TP   S + TP T
Sbjct: 753 VDSSAHGTPSTTVDSSAHATPSTPVDSSAHSTPSTPVDSSAHGTPSTPVDSSAHGTPST 811




 Score = 25.0 bits (53), Expect = 3.3,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 1/59 (1%)

Query: 90  IDNQQVKQAETKQNKSITKTPTKSPAKSSSKTPNSKTPNQKQQTPRTP-RQSHNATPKT 147
           +D+       T  + S   TP+     S+  TP++   +    TP TP   S + TP T
Sbjct: 681 VDSSAHGTPSTPVDSSAHATPSTPVDSSAHSTPSTPVDSSAHGTPSTPVDSSAHGTPST 739




 Score = 24.3 bits (51), Expect = 6.0,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 1/59 (1%)

Query: 90  IDNQQVKQAETKQNKSITKTPTKSPAKSSSKTPNSKTPNQKQQTPRTP-RQSHNATPKT 147
           +D+       T  + S   TP+     S+  TP++   +    TP TP   S + TP T
Sbjct: 789 VDSSAHGTPSTPVDSSAHGTPSTPVDSSAHGTPSTPVDSSAHGTPSTPVDSSAHGTPST 847




 Score = 23.9 bits (50), Expect = 6.6,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 21/48 (43%)

Query: 90  IDNQQVKQAETKQNKSITKTPTKSPAKSSSKTPNSKTPNQKQQTPRTP 137
           +D+    +  T  + S   TP+     S+  TP++   +    TP TP
Sbjct: 849 VDSSAHGKPSTPVDSSAHGTPSTPVDSSAHSTPSTPADSSAHSTPSTP 896




 Score = 23.9 bits (50), Expect = 7.0,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 1/50 (2%)

Query: 99  ETKQNKSITKTPTKSPAKSSSKTPNSKTPNQKQQTPRTP-RQSHNATPKT 147
           ++  + S   TP+     S+  TP++   +    TP TP   S ++TP T
Sbjct: 666 DSSSDSSAHGTPSIPVDSSAHGTPSTPVDSSAHATPSTPVDSSAHSTPST 715



>EAY09680.1 on XP_819530   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 904

 Score = 25.8 bits (55), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 23/51 (45%)

Query: 103 NKSITKTPTKSPAKSSSKTPNSKTPNQKQQTPRTPRQSHNATPKTGKFTEK 153
           NK  T +  K  AK S+ +  S  P     TP   +  + +TP   K TE+
Sbjct: 729 NKDSTPSLEKEAAKPSTVSSASIIPPAPPVTPNGQKAGNPSTPAGTKLTEQ 779



>EAY09680.1 on AAW78177  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 25.4 bits (54), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 1/69 (1%)

Query: 70  PPKL-PTEEPKETEQVEKQAKIDNQQVKQAETKQNKSITKTPTKSPAKSSSKTPNSKTPN 128
           PPK  P + P E+E  + + + DN  V++ E     +  + P+ +P +   + PN    +
Sbjct: 287 PPKWEPLDVPDESEDDQPRPRGDNSSVQKPEENIIDNNPQEPSPNPEEGKGENPNGFDLD 346

Query: 129 QKQQTPRTP 137
           +  + P  P
Sbjct: 347 ENPENPSNP 355



>EAY09680.1 on XP_817816   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 912

 Score = 25.0 bits (53), Expect = 3.3,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 27/60 (45%)

Query: 103 NKSITKTPTKSPAKSSSKTPNSKTPNQKQQTPRTPRQSHNATPKTGKFTEKTTKFKEIED 162
           NK  T +  ++P ++S+ +  S  P     TP   +   ++TP   + TE+       +D
Sbjct: 737 NKDSTPSLEENPLETSTVSSASIIPPSPPVTPNAQKTETSSTPAETQLTEQGQSMGSSKD 796



>EAY09680.1 on XP_804330   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 910

 Score = 25.0 bits (53), Expect = 3.4,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 28/78 (35%), Gaps = 1/78 (1%)

Query: 66  TLSKPPKLPTEEPKETEQVEKQAKIDNQQVKQAETKQNKSITKTPTKSPAKSSSKTPNSK 125
           T    P +P+  P   +  E QA ++   V               T +PA+ ++ T +++
Sbjct: 720 TTETQPTVPSPTPAGPQPTE-QATLNGSSVPSGGAPSTPEELNAATSTPAELNAATSSAR 778

Query: 126 TPNQKQQTPRTPRQSHNA 143
                Q    T    H A
Sbjct: 779 EGTADQPASATSSDGHEA 796



>EAY09680.1 on AAW78148  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 24.6 bits (52), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 11/87 (12%)

Query: 70  PPKL-PTEEPKETEQVEKQAKIDNQQVKQAETKQNKSITKTPTKSPAKSSSKTPNS---- 124
           PPK  P + P E E  + + + DN  V++ E     +  + P+ +P +   + PN     
Sbjct: 287 PPKWEPLDVPDEPEDDQPRPRGDNSAVQEPEENIIDNNPQEPSPNPEEGKGENPNGFDLD 346

Query: 125 ------KTPNQKQQTPRTPRQSHNATP 145
                   P+  QQ P  P  S    P
Sbjct: 347 ENPENPPNPDIPQQEPNIPEDSEKEVP 373



>EAY09680.1 on XP_806228   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1204

 Score = 24.6 bits (52), Expect = 4.6,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 1/59 (1%)

Query: 90   IDNQQVKQAETKQNKSITKTPTKSPAKSSSKTPNSKTPNQKQQTPRTP-RQSHNATPKT 147
            +D+       T  + S   TP+     S+  TP++   +    TP TP   S + TP T
Sbjct: 1041 VDSSAHSTPSTPVDSSAHSTPSTPVDSSAHSTPSTPVDSSAHSTPSTPVDSSAHGTPST 1099




 Score = 24.3 bits (51), Expect = 5.0,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%)

Query: 90  IDNQQVKQAETKQNKSITKTPTKSPAKSSSKTPNSKTPNQKQQTPRTP-RQSHNATPKT 147
           +D+       T  + S   TP+     S+  TP++   +    TP TP   S ++TP T
Sbjct: 813 VDSSAHSTPSTPADSSAHGTPSTPVDSSAHGTPSTPVDSSAHSTPSTPVDSSAHSTPST 871




 Score = 24.3 bits (51), Expect = 5.0,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%)

Query: 90   IDNQQVKQAETKQNKSITKTPTKSPAKSSSKTPNSKTPNQKQQTPRTP-RQSHNATPKT 147
            +D+       T  + S   TP+     S+  TP++   +    TP TP   S ++TP T
Sbjct: 1017 VDSSAHSTPSTPVDSSAHGTPSTPVDSSAHSTPSTPVDSSAHSTPSTPVDSSAHSTPST 1075




 Score = 24.3 bits (51), Expect = 5.0,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%)

Query: 90   IDNQQVKQAETKQNKSITKTPTKSPAKSSSKTPNSKTPNQKQQTPRTP-RQSHNATPKT 147
            +D+       T  + S   TP+     S+  TP++   +    TP TP   S ++TP T
Sbjct: 1029 VDSSAHGTPSTPVDSSAHSTPSTPVDSSAHSTPSTPVDSSAHSTPSTPVDSSAHSTPST 1087




 Score = 24.3 bits (51), Expect = 5.2,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%)

Query: 90  IDNQQVKQAETKQNKSITKTPTKSPAKSSSKTPNSKTPNQKQQTPRTP-RQSHNATPKT 147
           +D+       T  + S   TP+     S+  TP++   +    TP TP   S ++TP T
Sbjct: 801 VDSSAHSTPSTPVDSSAHSTPSTPADSSAHGTPSTPVDSSAHGTPSTPVDSSAHSTPST 859




 Score = 24.3 bits (51), Expect = 6.4,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 1/59 (1%)

Query: 90  IDNQQVKQAETKQNKSITKTPTKSPAKSSSKTPNSKTPNQKQQTPRTP-RQSHNATPKT 147
           +D+       T  + S   TP+     S+  TP++   +    TP TP   S + TP T
Sbjct: 693 VDSSAHSTPSTPADSSAHGTPSTPVDSSAHGTPSTPVDSSAHSTPSTPVDSSAHGTPST 751




 Score = 23.9 bits (50), Expect = 7.1,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%)

Query: 90  IDNQQVKQAETKQNKSITKTPTKSPAKSSSKTPNSKTPNQKQQTPRTP-RQSHNATPKT 147
           +D+       T  + S   TP+     S+  TP++   +    TP TP   S ++TP T
Sbjct: 765 VDSSAHSTPSTPVDSSAHGTPSTPVDSSAHGTPSTPVDSSAHSTPSTPVDSSAHSTPST 823




 Score = 23.9 bits (50), Expect = 7.1,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%)

Query: 90   IDNQQVKQAETKQNKSITKTPTKSPAKSSSKTPNSKTPNQKQQTPRTP-RQSHNATPKT 147
            +D+       T  + S   TP+     S+  TP++   +    TP TP   S ++TP T
Sbjct: 1005 VDSSAHGTPSTPVDSSAHSTPSTPVDSSAHGTPSTPVDSSAHSTPSTPVDSSAHSTPST 1063




 Score = 23.9 bits (50), Expect = 7.4,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%)

Query: 90  IDNQQVKQAETKQNKSITKTPTKSPAKSSSKTPNSKTPNQKQQTPRTP-RQSHNATPKT 147
           +D+       T  + S   TP+     S+  TP++   +    TP TP   S ++TP T
Sbjct: 681 VDSSAHGTPSTPVDSSAHSTPSTPADSSAHGTPSTPVDSSAHGTPSTPVDSSAHSTPST 739




 Score = 23.9 bits (50), Expect = 7.5,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 1/59 (1%)

Query: 90  IDNQQVKQAETKQNKSITKTPTKSPAKSSSKTPNSKTPNQKQQTPRTPRQSH-NATPKT 147
           +D+       T  + S   TP+     S+  TP++   +    TP TP  S  + TP T
Sbjct: 777 VDSSAHGTPSTPVDSSAHGTPSTPVDSSAHSTPSTPVDSSAHSTPSTPADSSAHGTPST 835




 Score = 23.9 bits (50), Expect = 7.6,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%)

Query: 90   IDNQQVKQAETKQNKSITKTPTKSPAKSSSKTPNSKTPNQKQQTPRTP-RQSHNATPKT 147
            +D+       T  + S   TP+     S+  TP++   +    TP TP   S ++TP T
Sbjct: 1077 VDSSAHSTPSTPVDSSAHGTPSTPVDSSAHGTPSAPVDSSAHSTPSTPVDSSAHSTPST 1135




 Score = 23.5 bits (49), Expect = 8.8,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 28/75 (37%), Gaps = 1/75 (1%)

Query: 74  PTEEPKETEQVEKQAKIDNQQVKQAETKQNKSITKTPTKSPAKSSSKTPNSKTPNQKQQT 133
           P+     +        +D+       T  + S   TP+     S+  TP++   +    T
Sbjct: 881 PSTPVDSSAHSTHSTPVDSSAHSTPSTPVDSSAHGTPSTPVDSSAHGTPSTPVDSSAHST 940

Query: 134 PRTP-RQSHNATPKT 147
           P TP   S + TP T
Sbjct: 941 PSTPVDSSAHGTPST 955




 Score = 23.5 bits (49), Expect = 9.2,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 1/59 (1%)

Query: 90  IDNQQVKQAETKQNKSITKTPTKSPAKSSSKTPNSKTPNQKQQTPRTP-RQSHNATPKT 147
           +D+       T  + S   TP+     S+  TP++   +    TP TP   S + TP T
Sbjct: 729 VDSSAHSTPSTPVDSSAHGTPSTPVDSSAHGTPSTPVDSSAHSTPSTPVDSSAHGTPST 787




 Score = 23.5 bits (49), Expect = 9.2,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 1/59 (1%)

Query: 90   IDNQQVKQAETKQNKSITKTPTKSPAKSSSKTPNSKTPNQKQQTPRTP-RQSHNATPKT 147
            +D+       T  + S   TP+     S+  TP++   +    TP TP   S + TP T
Sbjct: 981  VDSSAHSTPSTPVDSSAHGTPSTPVDSSAHGTPSTPVDSSAHSTPSTPVDSSAHGTPST 1039




 Score = 23.5 bits (49), Expect = 9.2,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 1/59 (1%)

Query: 90   IDNQQVKQAETKQNKSITKTPTKSPAKSSSKTPNSKTPNQKQQTPRTP-RQSHNATPKT 147
            +D+       T  + S   TP+     S+  TP++   +    TP TP   S + TP T
Sbjct: 1089 VDSSAHGTPSTPVDSSAHGTPSAPVDSSAHSTPSTPVDSSAHSTPSTPVDSSAHGTPST 1147




 Score = 23.5 bits (49), Expect = 9.7,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 21/50 (42%)

Query: 88   AKIDNQQVKQAETKQNKSITKTPTKSPAKSSSKTPNSKTPNQKQQTPRTP 137
            A +D+       T  + S   TP+     S+  TP++   +    TP TP
Sbjct: 1111 APVDSSAHSTPSTPVDSSAHSTPSTPVDSSAHGTPSTPVDSSAHSTPSTP 1160




 Score = 23.5 bits (49), Expect = 9.9,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 1/59 (1%)

Query: 90  IDNQQVKQAETKQNKSITKTPTKSPAKSSSKTPNSKTPNQKQQTPRTP-RQSHNATPKT 147
           +D+       T  + S   TP+     S+  TP++   +    TP TP   S + TP T
Sbjct: 789 VDSSAHGTPSTPVDSSAHSTPSTPVDSSAHSTPSTPADSSAHGTPSTPVDSSAHGTPST 847



>EAY09680.1 on AAY44839  MSA-1  (Invasion)  [Babesia bovis]
          Length = 274

 Score = 23.5 bits (49), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 11/33 (33%), Positives = 21/33 (63%)

Query: 5   LQDILDFYLPNGLPSEEEIKKMTDDERNQLFDA 37
           L + +D   PNG  +EE IK+M    +N+++++
Sbjct: 138 LNNEVDRLFPNGQETEENIKEMNKYFKNKVYNS 170



>EAY09680.1 on XP_802771   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 341

 Score = 23.9 bits (50), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 3/59 (5%)

Query: 91  DNQQVKQAETKQNKSITKTPTKSPAKSSS-KTPNSKTPNQKQQTPRTPRQ-SHNATPKT 147
           DN       T  + S   TP+ +PA SS+  TP++   N    TP TP     ++TP T
Sbjct: 167 DNGAHSTPSTPADSSAHSTPS-TPADSSAHSTPSTPADNGAHSTPSTPGDNGAHSTPST 224



>EAY09680.1 on XP_810140   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 923

 Score = 23.9 bits (50), Expect = 7.7,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 14/68 (20%)

Query: 68  SKPPKLPTEEPKETEQVEKQAKIDNQQVKQAETKQNKSITKTPTKSPAKSSSKTPNSKTP 127
           S P    +EEPK  E        ++++ K AE++  +         P +S S+ P    P
Sbjct: 750 STPAVSESEEPKPAES-------ESEEPKPAESESEEP-------KPVESESEEPKPAEP 795

Query: 128 NQKQQTPR 135
           N    + R
Sbjct: 796 NAATSSAR 803



>EAY09680.1 on XP_001349515  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 1711

 Score = 23.9 bits (50), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 10/15 (66%), Positives = 11/15 (73%)

Query: 66   TLSKPPKLPTEEPKE 80
             L KPPKLP  +PKE
Sbjct: 1220 VLPKPPKLPKRQPKE 1234



>EAY09680.1 on XP_817877   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 900

 Score = 23.9 bits (50), Expect = 8.2,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 4/41 (9%)

Query: 105 SITKTPTK----SPAKSSSKTPNSKTPNQKQQTPRTPRQSH 141
           S+ K PTK    S A   + TP      Q  +TP TP  +H
Sbjct: 732 SLVKEPTKPLTVSSASVVTPTPPVVATAQITETPSTPAGTH 772




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09687.1 hypothetical protein TVAG_098230 [Trichomonas
vaginalis G3]
         (426 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609751  variant erythrocyte surface antigen-1, alpha subun...    25   7.0  

>EAY09687.1 on XP_001609751  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1298

 Score = 25.4 bits (54), Expect = 7.0,   Method: Composition-based stats.
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 3/32 (9%)

Query: 194 KEIESVKLQIESCRIRIDELEEVKNNLDEEIK 225
           K IE VK   E+ ++  + L+  KN LDEE+K
Sbjct: 661 KAIEGVK---EALQVAKEGLDTAKNGLDEELK 689




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09693.1 AGC family protein kinase [Trichomonas
vaginalis G3]
         (308 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    34   0.010
XP_001609936  variant erythrocyte surface antigen-1, beta subuni...    28   0.94 
XP_812043   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.1  
XP_965997  PfEMP1  (Establishment)  [Plasmodium falciparum]            27   2.6  

>EAY09693.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 33.9 bits (76), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 8/106 (7%)

Query: 118 RILNGIICLHEHGMNHGCLNPDNIYFDSFGNP-KLIGYGLHV-----KDQSTELSNLIYR 171
           ++L  +   H  G+ H  + P N+  D      +LI +GL       ++ S  ++   Y+
Sbjct: 155 QLLKAMNYCHSQGIMHRDIKPHNVMIDHEKKILRLIDWGLAEFYHPEQEYSVRVATRYYK 214

Query: 172 APEEVKLQRRNNKEADMWSFGLVSHQIVANSFPFIV--DDAQQYIK 215
            PE +   R  +   D+WS G +   I+    PF    D+  Q +K
Sbjct: 215 GPELLVDMRYYDYSLDIWSIGCMLAGIIFKKEPFFYGHDNYDQLVK 260



>EAY09693.1 on XP_001609936  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 1133

 Score = 27.7 bits (60), Expect = 0.94,   Method: Composition-based stats.
 Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 21/116 (18%)

Query: 110 NDKIKLCIRILNGIICLHEHGMNH-GCLNPDNIYFDSFG-NPKLIGYGLH-VKDQSTELS 166
           +DK+ L  RI  G +CL   G++  G L  +     S G N +     LH +KD  T  S
Sbjct: 220 SDKVHLLARIFLGSVCLIWSGLSQLGFLTKEG----SGGINNRWSDSSLHEIKDDGT--S 273

Query: 167 NL-IYRAPEEVKLQRRNNKEADMWSFGLVSHQIVANSFPFIVDDAQQYIKTLITGQ 221
            L  + A     L+R N     MW++G+V +    N          +++ TL+TG+
Sbjct: 274 GLGSFMAAMGYDLERLNQGGKVMWTYGVVGN--TGNG---------EFVHTLLTGK 318



>EAY09693.1 on XP_812043   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 807

 Score = 26.6 bits (57), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 3/49 (6%)

Query: 224 SLISVGGILDKIVERCLDPDPNTRIT---SDGAREMFETIKEYKTLFSK 269
           SL+S GG++    E  +   P+T  T   SD   E  ++  E+ TL  K
Sbjct: 128 SLVSAGGVIAAFAEGHIGFKPHTESTKPFSDVVAEYIDSAWEWPTLVEK 176



>EAY09693.1 on XP_965997  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2879

 Score = 26.6 bits (57), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 10/58 (17%)

Query: 210  AQQYIKTLITGQQISLISVGGILDKIVERCLDPD---------PNTRITSDGAREMFE 258
            AQ+YIK  I G +     +  I +KI  R  + D         PN +I  D ++E+ +
Sbjct: 2359 AQEYIKGKIEGNECDFNDMENIYEKITNR-KNKDFQEILGILCPNKKIDKDKSKEILD 2415




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09701.1 hypothetical protein TVAG_098360 [Trichomonas
vaginalis G3]
         (655 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_803882   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   1.8  
XP_805896   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   7.3  

>EAY09701.1 on XP_803882   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 203

 Score = 27.7 bits (60), Expect = 1.8,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 50/124 (40%), Gaps = 21/124 (16%)

Query: 15  EATQDKSYKNYLIESTITGSQGYTGPIGHDHGENIVRNVNISNSQASSINSVYS----IS 70
           +A  D S  N LI++ +  S         D GE     + I NS+ASS++ V      + 
Sbjct: 83  DARYDTSNDNSLIDTVVKYSV--------DDGEKWETQIAIKNSRASSVSRVVDPTVIVK 134

Query: 71  GNSDLDSTVSYSTFIKNIADDERCLLHYKNGNRVNHCNIISNECSMTSTYFNGVIYASYY 130
           GN        Y++         R     + G RV+ C ++S E      + +G++     
Sbjct: 135 GNKIYVLVGGYNS--------SRSYWTAQRGVRVD-CPVLSGEARSQQCFPHGIVAVGTG 185

Query: 131 VKVF 134
           + VF
Sbjct: 186 LTVF 189



>EAY09701.1 on XP_805896   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 692

 Score = 26.2 bits (56), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 29/136 (21%), Positives = 55/136 (40%), Gaps = 17/136 (12%)

Query: 322 NKTIDKGIKIRGSGIYSEDFSINCSIGDINSIFDGTLTKNAATHSFTFSGSCFIPNSIVE 381
           N T+  G+    SG+  +       +GD+        T N     FT S + FI + + +
Sbjct: 496 NATVGSGVTSTESGVALKGAGAEWPVGDMGQTVPYYFTNN----KFTLSATVFI-HEVPK 550

Query: 382 ENNYSVTVWGTTINSGETTSLQSKEFYFYRNYPVLEVTPLTTRRF-IHNIDSIISVSGFV 440
             +  V + G  +N  ++T L    +   RN+           +F +H  + ++  SG V
Sbjct: 551 AGSIPVPLIGARLNDTDSTVLFQLSYTSERNW-----------KFTLHKKEFLVKPSGDV 599

Query: 441 SDQDCDDIVVVYVFID 456
            + + +  + V V  D
Sbjct: 600 GNWETNTAIQVTVQKD 615




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09719.1 hypothetical protein TVAG_098540 [Trichomonas
vaginalis G3]
         (414 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_809097   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   0.39 
XP_001351080  PfEMP1  (Establishment)  [Plasmodium falciparum]         29   0.58 
XP_807986   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   1.3  
XP_809850   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   1.3  
XP_804173   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   1.4  
XP_814555   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.9  
XP_001350409  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   2.8  
AAT07418  Tc85  (Adhesin)  [Trypanosoma cruzi]                         24   4.0  
AAT07417  Tc85  (Adhesin)  [Trypanosoma cruzi]                         24   4.0  
XP_818221   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   4.3  
XP_822017   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   5.1  
XP_806541   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   7.0  

>EAY09719.1 on XP_809097   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 190

 Score = 28.9 bits (63), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 7/47 (14%)

Query: 375 IDPSLLTVGELLARVAKIREDTKLSDDEDEETSS-------NTSYDW 414
           + PSL++ G ++A  A+ R  T  +  ++E+TSS       ++S+DW
Sbjct: 104 VSPSLVSAGGVIAAFAEGRVYTVNAGRQNEKTSSDVVAGYIDSSWDW 150



>EAY09719.1 on XP_001351080  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2209

 Score = 29.3 bits (64), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 20/98 (20%), Positives = 42/98 (42%), Gaps = 8/98 (8%)

Query: 240  TPAQQGNESAAQYIAPAPSVAPSVRVMNRKPQNTNISPQRQTAVENSQQLYSR------E 293
            TP+  GN++   +   AP +   +       + +    ++Q  +E    +Y++       
Sbjct: 1078 TPSTSGNDAKTWWKENAPHIWEGMICALTYKETSGSGGEKQ--IEKDSDVYNKFFGSTAA 1135

Query: 294  TQNYTEQAQISAPQKQIEESKPLPPPPPPVAAPNVEPP 331
            TQ  T +++      ++EE+     P  P  +PN +PP
Sbjct: 1136 TQKGTYESKYKYTDVKLEENSGTGGPRGPNESPNSKPP 1173



>EAY09719.1 on XP_807986   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1054

 Score = 27.7 bits (60), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 2/32 (6%)

Query: 308 KQIEES--KPLPPPPPPVAAPNVEPPKPSVAA 337
           KQ EES   P+P  PP   A     PKP+ AA
Sbjct: 764 KQEEESVHNPVPAAPPSTVAAGSSVPKPATAA 795



>EAY09719.1 on XP_809850   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 915

 Score = 27.7 bits (60), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 13/24 (54%), Positives = 15/24 (62%)

Query: 317 PPPPPPVAAPNVEPPKPSVAAPAQ 340
           P  P PV + +V PP P VAA AQ
Sbjct: 751 PSTPSPVPSASVVPPTPLVAATAQ 774



>EAY09719.1 on XP_804173   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 746

 Score = 27.7 bits (60), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 7/47 (14%)

Query: 375 IDPSLLTVGELLARVAKIREDTKLSDDEDEETSS-------NTSYDW 414
           + PSL++ G ++A  A+ R  T  +  ++E+TSS       ++S+DW
Sbjct: 104 VSPSLVSAGGVIAAFAEGRVYTVNAGRQNEKTSSDVVAGYIDSSWDW 150



>EAY09719.1 on XP_814555   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 907

 Score = 27.3 bits (59), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 13/24 (54%), Positives = 15/24 (62%)

Query: 317 PPPPPPVAAPNVEPPKPSVAAPAQ 340
           P  P PV + +V PP P VAA AQ
Sbjct: 743 PSTPSPVPSASVVPPTPLVAATAQ 766



>EAY09719.1 on XP_001350409  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2223

 Score = 26.9 bits (58), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 3/29 (10%)

Query: 314  KPLPPPPPPVAAPNVEPPKPSVAAPAQAP 342
            KP    PPP  AP+V PP     APA  P
Sbjct: 1729 KPEEEAPPPAQAPDVAPP---ARAPADQP 1754



>EAY09719.1 on AAT07418  Tc85  (Adhesin)  [Trypanosoma cruzi]
          Length = 70

 Score = 24.3 bits (51), Expect = 4.0,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 31/54 (57%)

Query: 361 PVKKEENKSEIREDIDPSLLTVGELLARVAKIREDTKLSDDEDEETSSNTSYDW 414
           P     NK++    + PSL++ G ++A  A+ +  T  +D++ ++TSS+   ++
Sbjct: 11  PKGGTSNKTKRDSFVSPSLVSAGGVIAAFAEGQVYTVNADNQRKKTSSDVVAEY 64



>EAY09719.1 on AAT07417  Tc85  (Adhesin)  [Trypanosoma cruzi]
          Length = 70

 Score = 24.3 bits (51), Expect = 4.0,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 31/54 (57%)

Query: 361 PVKKEENKSEIREDIDPSLLTVGELLARVAKIREDTKLSDDEDEETSSNTSYDW 414
           P     NK++    + PSL++ G ++A  A+ +  T  +D++ ++TSS+   ++
Sbjct: 11  PKGGTSNKTKRDSFVSPSLVSAGGVIAAFAEGQVYTVNADNQRKKTSSDVVAEY 64



>EAY09719.1 on XP_818221   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 748

 Score = 26.2 bits (56), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 7/47 (14%)

Query: 375 IDPSLLTVGELLARVAKIREDTKLSDDEDEETSSNT-------SYDW 414
           + PSL++ G ++A  A+ R  T  +  ++E+TSS+        ++DW
Sbjct: 105 VSPSLVSAGGVIAAFAEGRVYTVNAGRQNEKTSSDVVAGYIDATWDW 151



>EAY09719.1 on XP_822017   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 990

 Score = 25.8 bits (55), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 12/25 (48%), Positives = 16/25 (64%)

Query: 316 LPPPPPPVAAPNVEPPKPSVAAPAQ 340
           +P  P  V++ +V  P PSVAA AQ
Sbjct: 827 VPTKPLTVSSASVVSPIPSVAATAQ 851



>EAY09719.1 on XP_806541   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 753

 Score = 25.4 bits (54), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 9/62 (14%)

Query: 362 VKKEENKSEIRED--IDPSLLTVGELLARVAKIREDTKLSDDEDEETSS-------NTSY 412
           V K+    E + D  + PSL++ G ++A  A+   +TK    +  + SS       ++++
Sbjct: 52  VSKDGRSQETKRDAFVSPSLVSAGGVIAAFAEGHMETKYQGGQSTKPSSDVVAEYIDSAW 111

Query: 413 DW 414
           DW
Sbjct: 112 DW 113




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09724.1 hypothetical protein TVAG_413720 [Trichomonas
vaginalis G3]
         (489 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CAD98301  Subtilase  (Others)  [Cryptosporidium parvum]                25   6.8  
AAL38222  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   26   7.3  
AAL38220  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   25   9.5  
AAL38221  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   25   10.0 
AAL38218  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   25   10.0 

>EAY09724.1 on CAD98301  Subtilase  (Others)  [Cryptosporidium parvum]
          Length = 255

 Score = 25.4 bits (54), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 12/29 (41%), Positives = 16/29 (55%)

Query: 138 GEFTSVGDKDLSDARYYRFKSKNSELAKE 166
           GEF+ +G+ D  D  YY+ K  N E   E
Sbjct: 88  GEFSEMGNMDDEDDYYYQEKDSNQEFNSE 116



>EAY09724.1 on AAL38222  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2976

 Score = 25.8 bits (55), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)

Query: 8    LSETSNQITKLWNEIGYTMSETKKEKKQIEEEL--LNVLATHLQKVQQEKKDI 58
            L E  N I K++ E      E KKE KQI +E   ++V+   L+ + ++  D+
Sbjct: 1360 LQEIKNNIIKIFKEFKSAHKEIKKESKQINKEFTKMDVVINQLRDIDRQMLDL 1412



>EAY09724.1 on AAL38220  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2957

 Score = 25.4 bits (54), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)

Query: 8    LSETSNQITKLWNEIGYTMSETKKEKKQIEEEL--LNVLATHLQKVQQEKKDI 58
            L E  N I K++ E      E KKE KQI +E   ++V+   L+ + ++  D+
Sbjct: 1347 LQEIKNNIIKIFKEFESAHKEIKKESKQINKEFTKMDVVINQLRDIDRQMLDL 1399



>EAY09724.1 on AAL38221  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2965

 Score = 25.4 bits (54), Expect = 10.0,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)

Query: 8    LSETSNQITKLWNEIGYTMSETKKEKKQIEEEL--LNVLATHLQKVQQEKKDI 58
            L E  N I K++ E      E KKE KQI +E   ++V+   L+ + ++  D+
Sbjct: 1353 LQEIKNNIIKIFKEFESAHKEIKKESKQINKEFTKMDVVINQLRDIDRQMLDL 1405



>EAY09724.1 on AAL38218  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2977

 Score = 25.4 bits (54), Expect = 10.0,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)

Query: 8    LSETSNQITKLWNEIGYTMSETKKEKKQIEEEL--LNVLATHLQKVQQEKKDI 58
            L E  N I K++ E      E KKE KQI +E   ++V+   L+ + ++  D+
Sbjct: 1357 LQEIKNNIIKIFKEFESAHKEIKKESKQINKEFTKMDVVINQLRDIDRQMLDL 1409




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09727.1 peptidyl-prolyl cis-trans isomerase,
FKBP-type family protein [Trichomonas vaginalis G3]
         (282 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_805533   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.55 
XP_821378   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.6  
XP_001347691  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   1.9  
XP_811916   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   3.3  
XP_804895   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   3.5  
XP_811687   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   3.5  
XP_810614   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   4.0  
XP_811688   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   4.5  
XP_001349033  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   6.2  
XP_804885   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   7.8  
XP_815493   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   9.8  

>EAY09727.1 on XP_805533   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 794

 Score = 28.5 bits (62), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 7/52 (13%)

Query: 27  TLRTGKGARPRRCQKVAI-HYTMSL------ENGPKVYSTRDEGKPFDFTVG 71
           T     G  P +C K  I  +  SL      ENG +VY +RD G  +  T+G
Sbjct: 309 TWSISTGVSPAKCLKPRITEWEGSLLMIVDCENGQRVYESRDMGTTWTGTIG 360



>EAY09727.1 on XP_821378   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 934

 Score = 26.9 bits (58), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 4/77 (5%)

Query: 113 NANLFVELDLLYILEDMPKEEAIKQAEEVNKRAGEAYRNEKYEEASVLYHECCQILQCHT 172
           +AN+F  +      + + K+ A    E +N    +    EKY  A+V   + C+      
Sbjct: 114 DANIFTGI----ASQLLTKDNADTPVELLNGAKDKTQVLEKYHSAAVKKVDVCRPTTVMQ 169

Query: 173 GDDLDLLFDKYRSNLST 189
           G+D+ +L  KY    +T
Sbjct: 170 GNDIYMLVGKYSQTAAT 186



>EAY09727.1 on XP_001347691  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2182

 Score = 26.6 bits (57), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 2/38 (5%)

Query: 245  SNNDPVFSSRTKDIEKASAEMKSAQENVYKKMAGKKFF 282
            SN+D   SS   DI K   EMK+ +E +  K A +KFF
Sbjct: 1100 SNDDNTKSSTYNDILKGDKEMKAKEEKI--KEAIQKFF 1135



>EAY09727.1 on XP_811916   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 685

 Score = 25.8 bits (55), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 7/47 (14%)

Query: 33  GARPRRC-------QKVAIHYTMSLENGPKVYSTRDEGKPFDFTVGS 72
           G  P RC        + ++   +  ENG +VY +RD G  +   +G+
Sbjct: 276 GTSPERCGAPRITEWEGSLLMIVDCENGQRVYESRDMGTTWTEAIGT 322



>EAY09727.1 on XP_804895   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 787

 Score = 25.8 bits (55), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 7/54 (12%)

Query: 26  CTLRTGKGARPRRCQKV-------AIHYTMSLENGPKVYSTRDEGKPFDFTVGS 72
            T    +G  P +C K        ++   +  E+G +VY +RD G  +  T+G+
Sbjct: 304 STWSLSEGMSPAKCLKPRVTEWEGSLLMIVDCEDGQRVYESRDMGTTWTGTIGA 357



>EAY09727.1 on XP_811687   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 722

 Score = 25.8 bits (55), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 32  KGARPRRCQ-KVAIHYTMSLENGPKVYSTRDEGKPFDFTVGS 72
           K +RPR  + + ++   +  E+G +VY +RD G  +  T+G+
Sbjct: 318 KCSRPRVTEWEGSLLMIVDCEDGQRVYESRDVGATWTGTIGT 359



>EAY09727.1 on XP_810614   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 728

 Score = 25.4 bits (54), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 11/65 (16%)

Query: 15  ISEAHDGKVMKCTLRTGKGARPRRC-------QKVAIHYTMSLENGPKVYSTRDEGKPFD 67
           I    DG+  K +L TG    P +C        K ++   +  ENG  V+ +RD GK + 
Sbjct: 287 IYSTDDGE--KWSLSTG--MSPAKCFNPRITEWKGSLLMIVDCENGQSVFESRDMGKTWT 342

Query: 68  FTVGS 72
             VG+
Sbjct: 343 EAVGT 347



>EAY09727.1 on XP_811688   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 573

 Score = 25.4 bits (54), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 32  KGARPRRCQ-KVAIHYTMSLENGPKVYSTRDEGKPFDFTVGS 72
           K +RPR  + + ++   +  E+G +VY +RD G  +  T+G+
Sbjct: 322 KCSRPRVTEWEGSLLMIVDCEDGQRVYESRDVGATWTGTIGT 363



>EAY09727.1 on XP_001349033  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2064

 Score = 25.0 bits (53), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 6/31 (19%)

Query: 103 EAGHP------PTVPPNANLFVELDLLYILE 127
           E GHP      P  PP+     E+D+LY  E
Sbjct: 481 ERGHPHCPKKPPYTPPDGAKCTEIDVLYTGE 511



>EAY09727.1 on XP_804885   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 446

 Score = 24.6 bits (52), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 7/53 (13%)

Query: 27  TLRTGKGARPRRCQKVAIH-------YTMSLENGPKVYSTRDEGKPFDFTVGS 72
           T    KG  P +C    I          +  E+G +VY +RD G  +   VG+
Sbjct: 308 TWALSKGVSPAKCLNPRITEWEGSLLMIVDCEDGQRVYESRDMGTTWTEAVGT 360



>EAY09727.1 on XP_815493   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 706

 Score = 24.3 bits (51), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 10/22 (45%), Positives = 14/22 (63%)

Query: 51  ENGPKVYSTRDEGKPFDFTVGS 72
           ENG  VY +RD GK +   +G+
Sbjct: 296 ENGQSVYESRDMGKTWTEAIGT 317




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09734.1 hypothetical protein TVAG_413840 [Trichomonas
vaginalis G3]
         (610 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09739.1 hypothetical protein TVAG_413890 [Trichomonas
vaginalis G3]
         (265 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_829784  VSG  (Establishment)  [Trypanosoma brucei]                  26   2.1  
AAP33064  Vps26  (Establishment)  [Entamoeba histolytica]              25   5.7  

>EAY09739.1 on XP_829784  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 474

 Score = 26.2 bits (56), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 11/26 (42%), Positives = 17/26 (65%)

Query: 22  YTGSISQNNFGYSNSLKVVRIYSEIT 47
           +T +IS+    + NSLK  RI +E+T
Sbjct: 331 FTAAISRLEAAHKNSLKNARIAAEVT 356



>EAY09739.1 on AAP33064  Vps26  (Establishment)  [Entamoeba histolytica]
          Length = 328

 Score = 24.6 bits (52), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 20  YCYTGSISQNNFGYSNSLKVVRIYSEITTEEKFISNSSNIEEICFTNLKNETVNND 75
           + ++G I +    YS     +R Y  ++  +K+ S  S  +EI   N ++E   ND
Sbjct: 102 FSFSG-IDKKYDSYSGKNVRLRYYLRVSVNKKYSSGLSKEQEIWVINYQDEPTKND 156




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09749.1 hypothetical protein TVAG_414000 [Trichomonas
vaginalis G3]
         (896 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_808957   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           32   0.23 
XP_807798   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           31   0.28 
XP_652776  Rab11B  (Establishment)  [Entamoeba histolytica]            29   0.69 
XP_820135   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   2.6  
AAC37226  SBP1  (Others)  [Babesia bovis]                              27   5.2  
XP_813237   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   7.8  

>EAY09749.1 on XP_808957   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1446

 Score = 31.6 bits (70), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 105/270 (38%), Gaps = 29/270 (10%)

Query: 191  SSFQRPAEKKRKHDKDKHDKEKR-EKDKDKKHGHHKSKHHSAEEGEEKPKDADKK--HKK 247
            S+  +PAE K    K    K    E  + K  G   ++  SAE    +PK A+ K    K
Sbjct: 1039 SAEPKPAEPKSAGPKPAEPKSAEPEPTEPKSAGPKPAEPKSAEPEPAEPKSAEPKPAEPK 1098

Query: 248  HSSKKTTEDQVSADVEVKAEVKVEEKPAEKIAEEPEVQKSDSSSEKEAPAPQPVEEEKAV 307
             +  K  E +             E KPAE  + EPE  K  S+  K A       E K+ 
Sbjct: 1099 SAGPKPAEPK-----------SAEPKPAEPKSAEPEPTKPKSAGPKPA-------EPKSA 1140

Query: 308  VVEEEKPKVEEEKPKE-EVIEPEKIEEK-VEEKPQEEEQKAVEEEKPHVEEEKPQVQEEH 365
              +  +PK  E KP E +  EP+  E K  E KP E +    +  +P   E +P  + + 
Sbjct: 1141 GPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAGPKPAEPKSAEPEP-AEPKS 1199

Query: 366  HEEKHEEVKEEVKSDIDLKVEEEKVTPPI----EKTEEKKEEVVEVVEEEKKPEPVVEEK 421
             E +  E K       + K  E K   P     E TE K  E      +  +PEP  E K
Sbjct: 1200 AEPEPTEPKSAEPEPTEPKSAEPKPAEPYSAEPEPTEPKSAEPKPAEPKSAEPEP-AEPK 1258

Query: 422  KVEEEKVEEEKIEENNSHEQDDHEEEEKPK 451
              E E  E +  E   +  +    E  +PK
Sbjct: 1259 SAEPEPAEPKSAEPKPAEPKSAEPEPTEPK 1288




 Score = 31.2 bits (69), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 74/174 (42%), Gaps = 13/174 (7%)

Query: 191  SSFQRPAEKKRKHDKDKHDKEKREKDKDKKHGHHK-SKHHSAEEGEEKPKDADKK--HKK 247
            S+  +PAE K    K    K    K  + K    K ++  SAE    +PK A+ K    K
Sbjct: 949  SAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPK 1008

Query: 248  HSSKKTTEDQVSADVEVKAEVKVEEKPAEKIAEEPEVQKSDSSSEKEAPAPQPVEEEKAV 307
             +  K  E + SA+ E       E KPAE  + EP+  +  S+  K A       E K+ 
Sbjct: 1009 SAEPKPAEPK-SAEPEPAEPKSAEPKPAEPKSAEPKPAEPKSAGPKPA-------EPKSA 1060

Query: 308  VVEEEKPKVEEEKPKE-EVIEPEKIEEK-VEEKPQEEEQKAVEEEKPHVEEEKP 359
              E  +PK    KP E +  EPE  E K  E KP E +    +  +P   E KP
Sbjct: 1061 EPEPTEPKSAGPKPAEPKSAEPEPAEPKSAEPKPAEPKSAGPKPAEPKSAEPKP 1114




 Score = 28.5 bits (62), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 105/265 (39%), Gaps = 27/265 (10%)

Query: 191  SSFQRPAEKKRKHDKDKHDKEKREKDKDKKHGHHK-SKHHSAEEGEEKPKDADKK--HKK 247
            S+  +PAE K    K    K    K  + K    K ++  SAE    +PK A+ +    K
Sbjct: 779  SAEPKPAEPKSAEPKPAEPKSAGPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPEPAEPK 838

Query: 248  HSSKKTTEDQVSADVEVKAEVKVEEKPAEKIAEEPEVQKSDSSSEKEAPAPQPVEEEKAV 307
             +  K  E + SA+ +       E KPAE  + EPE  +  S+  K A       E K+ 
Sbjct: 839  SAEPKPAEPK-SAEPKPAEPKSAEPKPAEPKSAEPEPAEPKSAEPKPA-------EPKSA 890

Query: 308  VVEEEKPKVEEEKPKEEVIEPEKIEEK------VEEKPQEEEQKAVEEEKPHVEEEKPQV 361
              E  +PK  E KP     EP+  E K       E KP E +    +  +P   E KP  
Sbjct: 891  EPEPAEPKSAEPKP----AEPKSAEPKPAEPKSAEPKPAEPKSAGPKPAEPKSAEPKP-A 945

Query: 362  QEEHHEEKHEEVKEEVKSDIDLKVEEEKVTPPIEKTEEKKEEVVEVVEEEKKP-EPVVEE 420
            + +  E K  E K       + K  E K   P  K+ E K    E    E KP EP   E
Sbjct: 946  EPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEP--KSAEPKP--AEPKSAEPKPAEPKSAE 1001

Query: 421  KKVEEEKVEEEKIEENNSHEQDDHE 445
             K  E K  E K  E  S E +  E
Sbjct: 1002 PKPAEPKSAEPKPAEPKSAEPEPAE 1026



>EAY09749.1 on XP_807798   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 875

 Score = 31.2 bits (69), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 12/98 (12%)

Query: 453 KVIKKGRFGKFMNKKKKNYDVSDSSESSEDEN-PFTPPKKVEPTPEPKPEPTPEKKPEE- 510
           KVI     G   +K ++  DVS + ++    N P +  +    TP   P P+ E+KP + 
Sbjct: 681 KVISHFYIGGDGDKTREQEDVSVTVKNVLLYNRPLSSEEITALTPNKAPTPSLEEKPSDP 740

Query: 511 KKVETPINTPPVEKVKDEPIMTPKKEGEQQQQETPKTP 548
             V +    PP       P++TP      QQ ETP TP
Sbjct: 741 STVSSGSVVPPT------PLVTPNA----QQTETPSTP 768



>EAY09749.1 on XP_652776  Rab11B  (Establishment)  [Entamoeba histolytica]
          Length = 211

 Score = 29.3 bits (64), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 4/51 (7%)

Query: 463 FMNKKKKNYDVSDSSESSEDENPFTPPKKVEPTPEPKPEPTPEKKPEEKKV 513
           FM   KK YD  DSS+S + E   T   +++P  EP    +   KPEEKK 
Sbjct: 164 FMTLLKKIYD--DSSKSVDGEQSNT--NEIKPATEPIDLGSQNNKPEEKKC 210



>EAY09749.1 on XP_820135   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1519

 Score = 28.1 bits (61), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 108/259 (41%), Gaps = 15/259 (5%)

Query: 191  SSFQRPAEKKRKHDKDKHDKEKREKDKDKKHGHHK-SKHHSAEEGEEKPKDADKKHKKHS 249
            S+  +PAE+K    K    K    K    K    K ++   AE     PK A++K    S
Sbjct: 1165 SAGPKPAEQKSAESKPAEPKPAEPKPAGPKPAEPKPAEPKPAEPKPAGPKPAEQK----S 1220

Query: 250  SKKTTEDQVSADVEVKAEVKVEEKPAEKIAEEPEVQKSDSSSEKEAPAPQPVEEEKAVVV 309
            ++    +  SA+ +   +   E KPAE  + EP+  +  S+  K  PA Q   E K    
Sbjct: 1221 AESKPAEPKSAEPKPAEQKSAEPKPAEPKSAEPKPAEPKSAEPK--PAEQKSAEFKPAEP 1278

Query: 310  EEEKPKVEEEKPKE-EVIEPEKIEEK-VEEKPQEEEQKAVEEEKPHVEEEKPQVQEEHHE 367
            +  +PK  E KP E +  EP+  E+K  E KP E +    +  +P   E KP  + +  E
Sbjct: 1279 KPAEPKSAEPKPAEPKSAEPKPAEQKSAESKPAEPKPAEPKPAEPKPAEPKP-AEPKSAE 1337

Query: 368  EKHEEVKEEVKSDIDLKVEEEKVTPPIEKTEEKKEEVVEVVEEEKKP-EPVVEEKKVEEE 426
             K  E K       + K  E+K   P  KT E K    E    E KP EP   E K  E 
Sbjct: 1338 PKSAEPKPAEPKSAEPKPAEQKSAEP--KTAEPK--PAEPKSAEPKPAEPKPAEPKPAEP 1393

Query: 427  KVEEEKIEENNSHEQDDHE 445
            K  E K  E  S E    E
Sbjct: 1394 KSAEPKPAEPKSAEPKPAE 1412



>EAY09749.1 on AAC37226  SBP1  (Others)  [Babesia bovis]
          Length = 596

 Score = 26.9 bits (58), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 7/57 (12%)

Query: 496 PEPKPEPTPEKKPEEKKVETPINTP-------PVEKVKDEPIMTPKKEGEQQQQETP 545
           P  KP   P +KP EK  ETP  TP       P EK  ++P   P ++  ++  ETP
Sbjct: 316 PAEKPAEKPAEKPAEKPAETPAETPAEKPAEKPAEKPAEKPAEKPAEKPAEKPAETP 372




 Score = 26.6 bits (57), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 1/50 (2%)

Query: 496 PEPKPEPTPEKKPEEKKVETPINTPPVEKVKDEPIMTPKKEGEQQQQETP 545
           P  KP   P +KP E   ETP  T P EK  + P  TP +   +   ETP
Sbjct: 356 PAEKPAEKPAEKPAETPAETPAET-PAEKPAETPAETPAETPAETPAETP 404



>EAY09749.1 on XP_813237   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1496

 Score = 26.6 bits (57), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 98/256 (38%), Gaps = 12/256 (4%)

Query: 195  RPAEKKRKHDKDKHDKEKREKDKDKKHGHHKS---KHHSAEEGEEKPKDADKKHKKHSSK 251
            +PAE K    K    K    K  + K    K    K    +  E KP +      K +  
Sbjct: 986  KPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 1045

Query: 252  KTTEDQVSADVEVKAEVKVEEKPAEKIAEEPEVQKSDSSSEKEAPAPQPVEEEKAVVVEE 311
            K  E +  A+ +       E KP E  A EP+  +  S+  K A  P+P E + A     
Sbjct: 1046 KPAEPK-PAEPKPAEPKPAEPKPVEPKAAEPKPAEPKSAEPKPA-EPKPAEPKPAEPKSA 1103

Query: 312  EKPKVEEEKPKE-EVIEPEKIEEK-VEEKPQEEEQKAVEEEKPHVEEEKPQVQEEHHEEK 369
            E PK  E KP E +  EP+ +E K  E KP E +    +  +P   E KP  + +  E K
Sbjct: 1104 E-PKPAEPKPAEPKPAEPKPVEPKPAEPKPAEPKPAEPKPAEPKPAEPKP-AEPKSAEPK 1161

Query: 370  HEEVKEEVKSDIDLKVEEEKVTPPIEKTEEKKEEVVEVVEEEKKPEPVVEEKKVEEEKVE 429
              E K      ++ K  E K   P E    + +       E K  EP   E K  E K  
Sbjct: 1162 PAEPKPAEPKPVEPKPAEPK---PAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPAEPKPA 1218

Query: 430  EEKIEENNSHEQDDHE 445
            E K  E  S E    E
Sbjct: 1219 EPKPAEPKSAEPKPAE 1234




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09752.1 Oxidoreductase family, NAD-binding Rossmann
fold containing protein [Trichomonas vaginalis G3]
         (322 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001349030  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   1.1  
XP_846884  VSG  (Establishment)  [Trypanosoma brucei]                  27   1.4  
XP_844689  VSG  (Establishment)  [Trypanosoma brucei]                  27   1.5  
XP_844686  VSG  (Establishment)  [Trypanosoma brucei]                  27   1.9  
XP_001351439  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   4.4  

>EAY09752.1 on XP_001349030  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2215

 Score = 27.7 bits (60), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 34/83 (40%), Gaps = 5/83 (6%)

Query: 10  WITERFIDAARHDKR--YNIVAVCSRSMESAKKFAEKNG--IPNTFDNLDAM-LDSGLIN 64
           W  E   D  R  K+   N+   C    +   ++  +NG     T + +  + +  G IN
Sbjct: 315 WFEEWAEDFCRKKKKKVQNLQKQCRDKYQGDDRYCSRNGYDCEQTINKIGKLVIGKGCIN 374

Query: 65  CMYVGTPNSTHRDNSIKALDKKI 87
           C+Y   P     +N  +  DK++
Sbjct: 375 CLYACNPYVDWINNQKEQFDKQV 397



>EAY09752.1 on XP_846884  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 493

 Score = 27.3 bits (59), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 14/56 (25%), Positives = 27/56 (48%)

Query: 264 GQKEVLRTSDYENDMVYECIEFADVVLGGKKESEINSHFCSLETMKVLDEARRQLG 319
           GQK+   T +   +  ++    A++ L    ES+++S   +L T   LD  R+ + 
Sbjct: 232 GQKKTPWTWNSNTNADFQTTHSAEINLLRGNESDLDSKLTTLRTAHALDSCRKAIA 287



>EAY09752.1 on XP_844689  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 509

 Score = 26.9 bits (58), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 8/22 (36%), Positives = 18/22 (81%)

Query: 7   GTGWITERFIDAARHDKRYNIV 28
           G+G++TE F+DAA+++  + ++
Sbjct: 378 GSGFVTETFLDAAKNENAHKVL 399



>EAY09752.1 on XP_844686  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 509

 Score = 26.9 bits (58), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 8/22 (36%), Positives = 18/22 (81%)

Query: 7   GTGWITERFIDAARHDKRYNIV 28
           G+G++TE F+DAA+++  + ++
Sbjct: 378 GSGFVTETFLDAAKNNHAHKVL 399



>EAY09752.1 on XP_001351439  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2326

 Score = 25.8 bits (55), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 5/67 (7%)

Query: 10  WITERFIDAARHDKRY-NIVA-VCSRSMESAKKFAEKNGIP---NTFDNLDAMLDSGLIN 64
           W  E   D  R  K+Y +IV   C        ++  +NG       +     ++D G IN
Sbjct: 327 WFEEWAEDFCRKKKKYVDIVKKYCRGVYNDVPRYCSRNGYDCEQTIYKKGYFVIDKGCIN 386

Query: 65  CMYVGTP 71
           C+Y   P
Sbjct: 387 CLYACNP 393




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09755.1 glucose-6-phosphate 1-dehydrogenase family
protein [Trichomonas vaginalis G3]
         (716 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_806989   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   4.4  

>EAY09755.1 on XP_806989   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 922

 Score = 26.9 bits (58), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 13/40 (32%), Positives = 23/40 (57%)

Query: 640 KESLVIGVFVPHVKMFRVTFGRKIINNSRNIMFIITDTDK 679
           K +L+ G+   H K ++VTFG  + N+S     +  +T+K
Sbjct: 564 KGTLLFGLSYTHEKKWKVTFGESLRNSSAYDYGVGWETNK 603




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09756.1 hypothetical protein TVAG_414070 [Trichomonas
vaginalis G3]
         (225 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_815629   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   6.3  
XP_807499   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   8.9  

>EAY09756.1 on XP_815629   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 321

 Score = 24.3 bits (51), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 9/27 (33%), Positives = 15/27 (55%)

Query: 51  GGYSLDDFTSNSYITCVNIIENNQSYD 77
           GGY   D  + S++T  N++  N+  D
Sbjct: 202 GGYGRSDMPTMSHVTVTNVLLYNRQLD 228



>EAY09756.1 on XP_807499   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 834

 Score = 23.9 bits (50), Expect = 8.9,   Method: Composition-based stats.
 Identities = 9/27 (33%), Positives = 15/27 (55%)

Query: 51  GGYSLDDFTSNSYITCVNIIENNQSYD 77
           GGY   D  + S++T  N++  N+  D
Sbjct: 619 GGYGRSDMPTMSHVTVTNVLLYNRQLD 645




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09758.1 hypothetical protein TVAG_414090 [Trichomonas
vaginalis G3]
         (130 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_827754  VSG  (Establishment)  [Trypanosoma brucei]                  25   1.6  
XP_846885  VSG  (Establishment)  [Trypanosoma brucei]                  24   3.7  
XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 24   4.3  
XP_843649  VSG  (Establishment)  [Trypanosoma brucei]                  23   8.9  
XP_001611901  variant erythrocyte surface antigen-1, alpha subun...    23   9.0  

>EAY09758.1 on XP_827754  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 480

 Score = 25.0 bits (53), Expect = 1.6,   Method: Composition-based stats.
 Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 5/43 (11%)

Query: 56  DVLVCFTNDDIRAMFTKLDPFNKGKVTLEQMQGALANFGTSRD 98
           D+  C   D +R  F K     +   TL   Q AL NFGT  D
Sbjct: 164 DIPDCKDRDAVRRTFKK-----EAVATLTGAQHALTNFGTGGD 201



>EAY09758.1 on XP_846885  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 525

 Score = 23.9 bits (50), Expect = 3.7,   Method: Composition-based stats.
 Identities = 12/28 (42%), Positives = 16/28 (57%)

Query: 5   EESARKYIEDNHLIQLSQALTTAVAHAK 32
           E +A  + E  +L Q S+ALT A  H K
Sbjct: 149 EAAASTFTEIENLKQASKALTAAAIHKK 176



>EAY09758.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 23.9 bits (50), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 16/93 (17%), Positives = 41/93 (44%), Gaps = 7/93 (7%)

Query: 24   LTTAVAHAKPDDPVEFLIKVIKQLKEARDNGGDVLVCFTNDDIRAMFTKLDPFNKGKVTL 83
            +T    + K  + V+FL+  +  ++E   +  ++ +C   +DI+ +        K  + L
Sbjct: 1873 ITVKKQYIKTIEDVKFLLDSLNTIEEKNKSVANLEICTNKEDIKNLL-------KHVIKL 1925

Query: 84   EQMQGALANFGTSRDVIPKVIGEEQGPFDLEQF 116
                G +    T+ ++ P+   E+    +L+ +
Sbjct: 1926 ANFSGIIVMSDTNTEITPENPLEDNDLLNLQLY 1958



>EAY09758.1 on XP_843649  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 509

 Score = 22.7 bits (47), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 11/30 (36%), Positives = 17/30 (56%)

Query: 98  DVIPKVIGEEQGPFDLEQFTKIINEGVKQT 127
           D+I +  G E G F  +  T++ N+ VK T
Sbjct: 346 DIIKQTYGPEPGDFKRKFVTELANQDVKYT 375



>EAY09758.1 on XP_001611901  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1211

 Score = 22.7 bits (47), Expect = 9.0,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 6/59 (10%)

Query: 32  KPDDPVEFLIKVIKQLKEARDNGGDVLVCFTNDDIRAMFTKLDPFNKGKVTLEQMQGAL 90
           K  DP+      +K LK   +  G+V+V   N        K+D  N  K  LE ++ AL
Sbjct: 671 KESDPI------VKNLKALLEKIGEVVVQLGNAQEALEGKKIDGINAVKKALEGVKKAL 723




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09759.1 hypothetical protein TVAG_414100 [Trichomonas
vaginalis G3]
         (444 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001610497  variant erythrocyte surface antigen-1, alpha subun...    28   1.3  
XP_001609754  variant erythrocyte surface antigen-1, alpha subun...    27   2.9  
XP_001611365  variant erythrocyte surface antigen-1, alpha subun...    27   3.4  
AAY44830  MSA-1  (Invasion)  [Babesia bovis]                           26   4.7  
AAY44834  MSA-1  (Invasion)  [Babesia bovis]                           26   4.9  
AAY44829  MSA-1  (Invasion)  [Babesia bovis]                           26   5.2  

>EAY09759.1 on XP_001610497  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1315

 Score = 28.1 bits (61), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 15/86 (17%)

Query: 221 RLKELQSQLQDITDDDREAEKR--------LQQVQSQTDSIQASLVETERKYQEEIATLR 272
           R+KE+   L  + + D  A  R        L  V  Q  + Q +L   E K +E I  ++
Sbjct: 643 RVKEMGKGLDGVKNVDAGAVSRVIKDLLVPLGNVVVQLGNAQEAL---EGKKKEAIEGVK 699

Query: 273 TQLSLVKAGNNEELERIKQEVDQQNA 298
           T L   K     EL++ KQE++Q N 
Sbjct: 700 TVLGKAKG----ELDKAKQELEQVNG 721



>EAY09759.1 on XP_001609754  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1295

 Score = 26.9 bits (58), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 4/52 (7%)

Query: 385 EDRIKERLSKAKEDLTIAMNKVEVQNEQIQSQRDE----IRMLQDQIQKTKA 432
           +DRI E ++K ++ LT+    +   N Q+   +DE    I+ L+D     K 
Sbjct: 777 KDRISEVINKVRDVLTVLEKGLPQVNGQLNGHKDEFTKAIKKLEDICNSPKC 828



>EAY09759.1 on XP_001611365  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1335

 Score = 26.6 bits (57), Expect = 3.4,   Method: Composition-based stats.
 Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 3/83 (3%)

Query: 326 KAAENIVKNFQELLQAAKDRADKLEQSRKKMAAD---LESLKIRKKHLEVSKASSLNLAQ 382
           K  E + K  +++     ++AD +E+++  + A    +  L   ++ LE  K   +N  +
Sbjct: 648 KVKEELGKVVKKVKLLEGEKADGIEKAKALLVAIGDVVVQLGNAQEALEGKKTEGINAVK 707

Query: 383 EKEDRIKERLSKAKEDLTIAMNK 405
           EK    K  L  AKE L  A+ K
Sbjct: 708 EKLTEAKGELEGAKEKLDEAVKK 730



>EAY09759.1 on AAY44830  MSA-1  (Invasion)  [Babesia bovis]
          Length = 322

 Score = 25.8 bits (55), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 13/49 (26%), Positives = 23/49 (46%)

Query: 82  FDKDEFESIKEQSNRNASVQQRHQRHKFLSQYSNIARISLDKLLLSRLF 130
           FDK +   +   + RN  +     +  F+S Y   A I ++ ++ S LF
Sbjct: 57  FDKTKMYGVIAANFRNGGLADEKVKEAFISLYKVSASIKVNPMINSDLF 105



>EAY09759.1 on AAY44834  MSA-1  (Invasion)  [Babesia bovis]
          Length = 320

 Score = 25.8 bits (55), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 13/49 (26%), Positives = 23/49 (46%)

Query: 82  FDKDEFESIKEQSNRNASVQQRHQRHKFLSQYSNIARISLDKLLLSRLF 130
           FDK +   +   + RN  +     +  F+S Y   A I ++ ++ S LF
Sbjct: 57  FDKTKMYGVIAANFRNGGLADEKVKEAFISLYKVSASIKVNPMINSDLF 105



>EAY09759.1 on AAY44829  MSA-1  (Invasion)  [Babesia bovis]
          Length = 318

 Score = 25.8 bits (55), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 13/49 (26%), Positives = 23/49 (46%)

Query: 82  FDKDEFESIKEQSNRNASVQQRHQRHKFLSQYSNIARISLDKLLLSRLF 130
           FDK +   +   + RN  +     +  F+S Y   A I ++ ++ S LF
Sbjct: 57  FDKTKMYGVIAANFRNGGLADEKVKEAFISLYKVSASIKVNPMINSDLF 105




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09760.1 CAMK family protein kinase [Trichomonas
vaginalis G3]
         (354 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    48   3e-07
XP_806226   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           31   0.095
XP_815493   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   0.52 
AAM47192  Rh4  (Adhesin)  [Plasmodium falciparum]                      28   1.00 
AAM47175  Rh4  (Adhesin)  [Plasmodium falciparum]                      28   1.0  
AAM47174  Rh4  (Adhesin)  [Plasmodium falciparum]                      28   1.0  

>EAY09760.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 48.1 bits (113), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 69/308 (22%), Positives = 117/308 (37%), Gaps = 58/308 (18%)

Query: 48  YVFLREIGSGAMSHVYEAVHTETGEHIAAKVYNLIQLCKP--------TLRSEPPPIDDV 99
           Y  +R+IG G  S V+E ++T T +    K+   ++  K          LR  P      
Sbjct: 55  YEIVRKIGRGKFSEVFEGLNTVTKDKCVIKILKPVKKKKIKREIKILQNLRGGPN----- 109

Query: 100 QKEIKIMMSIDHSYILSLIEAIEDDATRSLIIFMPFAQYGSVQTLLDKNQMNQDEISICF 159
                         I+ L++ ++D  +R+  +          +TL     +   +I    
Sbjct: 110 --------------IIKLLDIVKDPQSRTPSLIFEHVNNTDFKTLYP--TLTIQDIKYYI 153

Query: 160 LQIAYGLEELHSKNIVHRDIKNENFLC-FQKDFYVLSDFSVSTILDDPDQKLEDTKGSPA 218
            Q+   +   HS+ I+HRDIK  N +   +K    L D+ ++     P+Q+      +  
Sbjct: 154 YQLLKAMNYCHSQGIMHRDIKPHNVMIDHEKKILRLIDWGLAEFYH-PEQEYSVRVATRY 212

Query: 219 FLSPEECSGEAFYPKPADVWAYGVSLYLAVYKKLPFNLDQSNACPVANTV-LLVTQNL-- 275
           +  PE      +Y    D+W+ G  L   ++KK PF     N   +     +L T++L  
Sbjct: 213 YKGPELLVDMRYYDYSLDIWSIGCMLAGIIFKKEPFFYGHDNYDQLVKIAKVLGTEDLHR 272

Query: 276 --ETQTLQFP---------------------ENAD-VDSFVEDLISQCLNKDPTQRPTFT 311
             E   L+F                      EN   V   V DL+ + L  D T+R T  
Sbjct: 273 YFEKYGLKFAPAYQEILGNHSKKPWTKFVHHENQHLVSPEVMDLLDRMLVYDHTKRITPL 332

Query: 312 EITKHTYF 319
           E  +H +F
Sbjct: 333 EAMEHPFF 340



>EAY09760.1 on XP_806226   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 728

 Score = 31.2 bits (69), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 3/82 (3%)

Query: 7   SSKKVKASPVSEELSNSQENASSYVSFATFFQSSSKPQICEYVFLREIGSG-AMSHVYEA 65
           +SK V  + ++EEL+  +   S++     FF  SS P      FL +  SG   +  Y  
Sbjct: 452 TSKAVSLARLTEELNTIRSVLSTWAQLDAFFSKSSTPTAGLVGFLSDAASGDTWTDDYRC 511

Query: 66  VHTETGEHIAAKVYNLIQLCKP 87
           V+    +  AAKV N      P
Sbjct: 512 VNATVTK--AAKVKNGFNFTGP 531



>EAY09760.1 on XP_815493   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 706

 Score = 28.9 bits (63), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 4/81 (4%)

Query: 16  VSEELSNSQENASSYVSFATFFQSSSKPQICEYVFLREIGSGAMSHV--YEAVHTETGEH 73
           ++EEL+  +   S++     FF  SS P      FL +  SG  + +  Y  V+    + 
Sbjct: 424 MTEELNTIKSILSTWAQPDAFFSKSSTPTAGLVGFLSDTSSGGDTWIDDYRCVNASVTK- 482

Query: 74  IAAKVYNLIQLCKPTLRSEPP 94
            AAKV N      P  R+  P
Sbjct: 483 -AAKVENGFNFTGPGSRATWP 502



>EAY09760.1 on AAM47192  Rh4  (Adhesin)  [Plasmodium falciparum]
          Length = 1716

 Score = 28.1 bits (61), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 10/119 (8%)

Query: 68  TETGEHIAAKVYNLIQLCKPTLRSEPPPIDDVQKEIKIMM-SIDHSYILSLIEAIEDDAT 126
           T   EHI   + N IQ CKP        I  + +EIK  + +I+      +++ I+    
Sbjct: 716 TNNIEHIKQILINYIQECKPIQNISEHTIYTLYQEIKTNLENIEQ----KIMQNIQQTTN 771

Query: 127 RSLI-IFMPFAQYGSVQTLLDK--NQMNQDEISICFLQ--IAYGLEELHSKNIVHRDIK 180
           R  I I   F Q       L K  NQMN ++I +  ++  +    EE+   N+  RDIK
Sbjct: 772 RLKINIKKIFDQINQKYDDLTKNINQMNDEKIGLRQMENRLKGKYEEIKKANLQDRDIK 830



>EAY09760.1 on AAM47175  Rh4  (Adhesin)  [Plasmodium falciparum]
          Length = 1711

 Score = 28.1 bits (61), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 10/119 (8%)

Query: 68  TETGEHIAAKVYNLIQLCKPTLRSEPPPIDDVQKEIKIMM-SIDHSYILSLIEAIEDDAT 126
           T   EHI   + N IQ CKP        I  + +EIK  + +I+      +++ I+    
Sbjct: 714 TNNIEHIKQILINYIQECKPIQNISEHTIYTLYQEIKTNLENIEQ----KIMQNIQQTTN 769

Query: 127 RSLI-IFMPFAQYGSVQTLLDK--NQMNQDEISICFLQ--IAYGLEELHSKNIVHRDIK 180
           R  I I   F Q       L K  NQMN ++I +  ++  +    EE+   N+  RDIK
Sbjct: 770 RLKINIKKIFDQINQKYDDLTKNINQMNDEKIGLRQMENRLKGKYEEIKKANLQDRDIK 828



>EAY09760.1 on AAM47174  Rh4  (Adhesin)  [Plasmodium falciparum]
          Length = 1711

 Score = 28.1 bits (61), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 10/119 (8%)

Query: 68  TETGEHIAAKVYNLIQLCKPTLRSEPPPIDDVQKEIKIMM-SIDHSYILSLIEAIEDDAT 126
           T   EHI   + N IQ CKP        I  + +EIK  + +I+      +++ I+    
Sbjct: 716 TNNIEHIKQILINYIQECKPIQNISEHTIYTLYQEIKTNLENIEQ----KIMQNIQQTTN 771

Query: 127 RSLI-IFMPFAQYGSVQTLLDK--NQMNQDEISICFLQ--IAYGLEELHSKNIVHRDIK 180
           R  I I   F Q       L K  NQMN ++I +  ++  +    EE+   N+  RDIK
Sbjct: 772 RLKINIKKIFDQINQKYDDLTKNINQMNDEKIGLRQMENRLKGKYEEIKKANLQDRDIK 830




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09761.1 hypothetical protein TVAG_414120 [Trichomonas
vaginalis G3]
         (239 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]                 27   1.5  
XP_821078   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   2.0  
XP_001609618  variant erythrocyte surface antigen-1, alpha subun...    26   2.2  
AAL38219  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   25   4.9  
XP_001349036  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   5.1  
AAL38218  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   25   5.6  
AAL38222  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   25   5.7  
XP_812697   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   5.8  
AAL38220  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   25   6.0  
AAL38221  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   24   7.9  

>EAY09761.1 on XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]
          Length = 2112

 Score = 26.6 bits (57), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 10/40 (25%), Positives = 23/40 (57%)

Query: 9   PIKSPKREAKPIQNVEEEFCKRTLNLMTAFYENLPIAEIL 48
           P++ P+ E  P  N+E+ +CK   ++     E+  I++++
Sbjct: 544 PVEKPEPEKNPCINMEDCYCKDFYDITLVLDESASISDLI 583



>EAY09761.1 on XP_821078   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 940

 Score = 26.2 bits (56), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 7/64 (10%)

Query: 126 PLYIMNAEKDKEAEKVIKRRYMKSLNILKMEPIMKERLQESEKRGKERAAWRVNRMSKVN 185
           P+Y   AEKD E + V+      + +I+ + P+       SEK  ++ AA  +   S  N
Sbjct: 372 PVYSKKAEKDNEEKSVLHLWLTDNTHIVDIGPV-------SEKEDEDAAASSLLYKSADN 424

Query: 186 NETK 189
           NE +
Sbjct: 425 NEKE 428



>EAY09761.1 on XP_001609618  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1325

 Score = 26.2 bits (56), Expect = 2.2,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 21/48 (43%)

Query: 71  VDLRLKRAQENQQKLIREYNEKYDSHINEVKEMLKSSTSTLDDVFHSE 118
           VD  L++A     K +     K    IN+V EMLK     L +V   E
Sbjct: 766 VDGALEKATNKDGKEVDPGKNKISEAINKVLEMLKEMEKQLKEVLEKE 813



>EAY09761.1 on AAL38219  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2969

 Score = 25.0 bits (53), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 11/117 (9%)

Query: 54   EKVEVPQEKKCQFNSSIVDLRLKRAQENQQKLIREYNE--KYDSHINEVKEMLKSSTSTL 111
            EK+E  +  K   N  I    LK+ QEN +K+   YN+  KY+  I +   ++    + +
Sbjct: 1670 EKIEYLKNLKNSTNQQITLQELKQVQENVEKVKDIYNQTIKYEEEIKKNYHIITDYENKI 1729

Query: 112  DDVFHS--------EPVDRPPKPLYIMNAEKDKEAEKVIKRRYMKSLNILKMEPIMK 160
            +D+ H+        E  +   +   I++   DK  E+ IK    K +N+LK +  MK
Sbjct: 1730 NDILHNSFIKQINMESSNNKKQTKQIIDIINDKTFEEHIKTSKTK-INMLKEQSQMK 1785



>EAY09761.1 on XP_001349036  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2192

 Score = 25.0 bits (53), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 7/49 (14%)

Query: 88  EYNEKYDSHINEVKEMLKSSTSTLDDVFHSEPVDRPPKPLYIMNAEKDK 136
           +Y EKYD   +E+  ML  S + + D+          K L+I   +KD+
Sbjct: 172 QYQEKYDDSPSEMCTMLARSFADIGDIVRG-------KDLFIGYNQKDR 213



>EAY09761.1 on AAL38218  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2977

 Score = 25.0 bits (53), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 11/117 (9%)

Query: 54   EKVEVPQEKKCQFNSSIVDLRLKRAQENQQKLIREYNE--KYDSHINEVKEMLKSSTSTL 111
            EK+E  +  K   N  I    LK+ QEN +K+   YN+  KY+  I +   ++    + +
Sbjct: 1678 EKIEYLKNLKNSTNQQITLQELKQVQENVEKVKDIYNQTIKYEEKIKKNYHIITDYENKI 1737

Query: 112  DDVFHS--------EPVDRPPKPLYIMNAEKDKEAEKVIKRRYMKSLNILKMEPIMK 160
            +D+ H+        E  +   +   I++   DK  E+ IK    K +N+LK +  MK
Sbjct: 1738 NDILHNSFIKQINMESSNNKKQTKQIIDIINDKTFEEHIKTSKTK-INMLKEQSQMK 1793



>EAY09761.1 on AAL38222  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2976

 Score = 25.0 bits (53), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 11/117 (9%)

Query: 54   EKVEVPQEKKCQFNSSIVDLRLKRAQENQQKLIREYNE--KYDSHINEVKEMLKSSTSTL 111
            EK+E  +  K   N  I    LK+ QEN +K+   YN+  KY+  I +   ++    + +
Sbjct: 1681 EKIEYLKNLKNSTNQQITLQELKQVQENVEKVKDIYNQTIKYEEKIKKNYHIITDYENKI 1740

Query: 112  DDVFHS--------EPVDRPPKPLYIMNAEKDKEAEKVIKRRYMKSLNILKMEPIMK 160
            +D+ H+        E  +   +   I++   DK  E+ IK    K +N+LK +  MK
Sbjct: 1741 NDILHNSFIKQINMESSNNKKQTKQIIDIINDKTFEEHIKTSKTK-INMLKEQSQMK 1796



>EAY09761.1 on XP_812697   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 911

 Score = 24.6 bits (52), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 11/35 (31%), Positives = 19/35 (54%)

Query: 126 PLYIMNAEKDKEAEKVIKRRYMKSLNILKMEPIMK 160
           P+Y   AEKD E + V+      + +I+ + P+ K
Sbjct: 395 PVYAKKAEKDNEEKGVLHLWLTDNTHIVDIGPVSK 429



>EAY09761.1 on AAL38220  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2957

 Score = 24.6 bits (52), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 11/117 (9%)

Query: 54   EKVEVPQEKKCQFNSSIVDLRLKRAQENQQKLIREYNE--KYDSHINEVKEMLKSSTSTL 111
            EK+E  +  K   N  I    LK+ QEN +K+   YN+  KY+  I +   ++    + +
Sbjct: 1668 EKIEYLKNLKNSTNQQITLQELKQVQENVEKVKDIYNQTIKYEEKIKKNYHIITDYENKI 1727

Query: 112  DDVFHS--------EPVDRPPKPLYIMNAEKDKEAEKVIKRRYMKSLNILKMEPIMK 160
            +D+ H+        E  +   +   I++   DK  E+ IK    K +N+LK +  MK
Sbjct: 1728 NDILHNSFIKQINMESSNNKKQTKQIIDIINDKTFEEHIKTSKTK-INMLKEQSQMK 1783



>EAY09761.1 on AAL38221  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2965

 Score = 24.3 bits (51), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 11/117 (9%)

Query: 54   EKVEVPQEKKCQFNSSIVDLRLKRAQENQQKLIREYNE--KYDSHINEVKEMLKSSTSTL 111
            EK+E  +  K   N  I    LK+ QEN +K+   YN+  KY+  I     ++    + +
Sbjct: 1674 EKIEYLKNLKNSTNQQITLQELKQVQENVEKVKDIYNQTIKYEEKIKTNYHIITDYENKI 1733

Query: 112  DDVFHS--------EPVDRPPKPLYIMNAEKDKEAEKVIKRRYMKSLNILKMEPIMK 160
            +D+ H+        E  +   +   I++   DK  E+ IK    K +N+LK +  MK
Sbjct: 1734 NDILHNSFIKQINMESSNNKKQTKQIIDIINDKTFEEHIKTSKTK-INMLKEQSQMK 1789




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09768.1 hypothetical protein TVAG_414200 [Trichomonas
vaginalis G3]
         (340 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_816751   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.6  

>EAY09768.1 on XP_816751   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1042

 Score = 26.6 bits (57), Expect = 2.6,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 21/41 (51%), Gaps = 1/41 (2%)

Query: 105 RTHTWFLNLAKLLHIPQTFLENTNIMVERILSVITLDTPNL 145
           R H W  ++ ++  + Q   EN N+    +L   T++ P+L
Sbjct: 390 RLHLWLTDMQRIYDVGQISAENENVTASTLLYA-TVEVPSL 429




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09771.1 TPR Domain containing protein [Trichomonas
vaginalis G3]
         (404 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_816177   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   3.3  
XP_808719   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   3.4  
XP_804105   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   4.9  
XP_821137   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   6.9  
XP_816886   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   7.6  
XP_821712   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   8.1  

>EAY09771.1 on XP_816177   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 779

 Score = 26.6 bits (57), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 13/21 (61%), Positives = 16/21 (76%), Gaps = 2/21 (9%)

Query: 126 IEDVNIVLDTIPEYANPEKAD 146
           IED N++L T+P YAN  KAD
Sbjct: 375 IEDRNVMLVTLPVYAN--KAD 393



>EAY09771.1 on XP_808719   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 779

 Score = 26.6 bits (57), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 13/21 (61%), Positives = 16/21 (76%), Gaps = 2/21 (9%)

Query: 126 IEDVNIVLDTIPEYANPEKAD 146
           IED N++L T+P YAN  KAD
Sbjct: 376 IEDRNVMLVTLPVYAN--KAD 394



>EAY09771.1 on XP_804105   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1017

 Score = 25.8 bits (55), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 11/30 (36%), Positives = 19/30 (63%)

Query: 111 DRADCYIQVGKPELAIEDVNIVLDTIPEYA 140
           DR    +Q G  ++ IED +++L T+P Y+
Sbjct: 346 DRTGYGVQNGFIKVTIEDKDVLLVTLPVYS 375



>EAY09771.1 on XP_821137   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 956

 Score = 25.4 bits (54), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 20/29 (68%)

Query: 359 STSPGSKSARAQSATRSNRAASRNKDATP 387
           +TSP +K +  QSA+ ++ + ++N D TP
Sbjct: 814 TTSPAAKESEKQSASGTSPSGNKNVDGTP 842



>EAY09771.1 on XP_816886   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 905

 Score = 25.4 bits (54), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 10/24 (41%), Positives = 17/24 (70%)

Query: 117 IQVGKPELAIEDVNIVLDTIPEYA 140
           +Q G  ++ IED N++L T+P Y+
Sbjct: 312 VQNGFIKVTIEDKNVMLVTLPVYS 335



>EAY09771.1 on XP_821712   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 905

 Score = 25.4 bits (54), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 11/29 (37%), Positives = 20/29 (68%)

Query: 359 STSPGSKSARAQSATRSNRAASRNKDATP 387
           +TSP +K +  QSA+ ++ + ++N D TP
Sbjct: 775 TTSPAAKESENQSASGTSPSGNKNVDGTP 803




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09784.1 hypothetical protein TVAG_137740 [Trichomonas
vaginalis G3]
         (324 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_965999  PfEMP1  (Establishment)  [Plasmodium falciparum]            28   0.57 
XP_001352240  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   0.65 
XP_001609033  variant erythrocyte surface antigen-1, alpha subun...    25   7.3  
XP_001350798  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   9.2  
XP_001352170  MSP1  (Invasion)  [Plasmodium falciparum]                25   9.6  
XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 25   10.0 

>EAY09784.1 on XP_965999  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 1325

 Score = 28.5 bits (62), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 13/38 (34%), Positives = 23/38 (60%)

Query: 108 KWLTETLEDLINDYKSNLDKINNEFKDKELAIRENENT 145
           +W++E  E   N     +D++NN+ KD E++ R N +T
Sbjct: 310 RWMSEWSEYFCNVLNKEIDEMNNQCKDCEMSRRCNNDT 347



>EAY09784.1 on XP_001352240  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 1315

 Score = 28.5 bits (62), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 13/43 (30%), Positives = 25/43 (58%)

Query: 108 KWLTETLEDLINDYKSNLDKINNEFKDKELAIRENENTVFSKV 150
           +W++E  E   N     +D++NN+ KD E++ R N+++   K 
Sbjct: 300 RWMSEWSEYFCNVLNKEIDEMNNQCKDCEMSRRCNDDSEGGKC 342



>EAY09784.1 on XP_001609033  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1270

 Score = 25.0 bits (53), Expect = 7.3,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 23/51 (45%)

Query: 191 AKSNDFNGARQQARKAEEVNQKYIGKRKESTEKKYNQELKRLLNLQEKQLM 241
           AK NDF+ A+     A    Q+ +   K   E     ++K  LN  ++ L+
Sbjct: 735 AKGNDFDQAKNAGSSAIHKVQEILTPLKNGLEAAVKTDMKEELNGHQETLL 785



>EAY09784.1 on XP_001350798  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2359

 Score = 24.6 bits (52), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 5/62 (8%)

Query: 106 GAKWLTETLEDLINDYKSNLDKINNEFKDKELAIRENENTV-----FSKVHDRHILEIEE 160
           G K   +     +N+ K+   KI + FK +E    E EN +     F   HD  + E  E
Sbjct: 807 GCKGDCDCFLKWVNEKKTEWGKIKDHFKTQEGLDNEGENGIPESTRFGFTHDVVLGEFLE 866

Query: 161 VE 162
           ++
Sbjct: 867 LQ 868



>EAY09784.1 on XP_001352170  MSP1  (Invasion)  [Plasmodium falciparum]
          Length = 1720

 Score = 24.6 bits (52), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 4/97 (4%)

Query: 189 TLAKSNDFN--GARQQARKAEEVNQKYIGKRKESTEKKYNQELKRLLNLQEKQLMILLNR 246
           +LA  ND N  G        E++N+K I   KE   K +   +K+ ++L+EK +     +
Sbjct: 437 SLAADNDKNSYGDLMNPHTKEKINEKIITDNKE--RKIFINNIKKKIDLEEKNINHTKEQ 494

Query: 247 LNQSIDDNNRSKDNSIRELQKQYQVFYKSQLQRLIVD 283
             + ++D  +SK +    L+K Y++ + +   + +VD
Sbjct: 495 NKKLLEDYEKSKKDYEELLEKFYEMKFNNNFNKDVVD 531



>EAY09784.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 24.6 bits (52), Expect = 10.0,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 15/98 (15%)

Query: 216  KRKESTEKKYNQELKRLLNLQEKQLMILLNRLNQSIDDN-NRSKDNSIRELQKQYQVFYK 274
            K + S E+K+   LK L N+   ++  LLN+ ++ I DN  + K N +  L+ Q  +  K
Sbjct: 2905 KLRHSLEQKW---LKHLQNILSLKIDSLLNKNDEVIKDNETQLKTNILNSLKNQLYLNLK 2961

Query: 275  SQLQRLIVD---GQKQL--------PSTEQKSNFVVDI 301
             +L  +I +    QK++         S EQK+N +VDI
Sbjct: 2962 RELNEIIKEYEENQKKILHSNQLVNDSLEQKTNRLVDI 2999




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09785.1 hypothetical protein TVAG_137750 [Trichomonas
vaginalis G3]
         (264 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ABV49611  Thymidine kinase  (Invasion)  [Leishmania donovani]          26   2.4  

>EAY09785.1 on ABV49611  Thymidine kinase  (Invasion)  [Leishmania donovani]
          Length = 255

 Score = 25.8 bits (55), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 13/36 (36%), Positives = 20/36 (55%)

Query: 58  ASQVLSVSALNGKFDKTGVWEVFGTRPYAEKNYKLT 93
           A +V+ VSAL+G + +    ++    PY E   KLT
Sbjct: 102 AGKVVMVSALDGDYRRKPFGQICKLVPYCEAVDKLT 137




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09792.1 hypothetical protein TVAG_137840 [Trichomonas
vaginalis G3]
         (323 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAL38221  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   29   0.36 
AAL38219  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   29   0.36 
AAL38222  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   29   0.36 
AAL38218  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   29   0.36 
AAL38220  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   29   0.39 
XP_815192   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.6  

>EAY09792.1 on AAL38221  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2965

 Score = 29.3 bits (64), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 16/83 (19%)

Query: 93  RIYSDDSSVSSEFTKGVYS-----YSEISAYESFKNKIIYSS---IENAGKSNRLGSGTI 144
            IY DD S S  F K V +     Y  IS++ S + ++ Y     I        +   T+
Sbjct: 320 EIYIDDKSFSYTFLKDVINNKIDIYKTISSFISTQKQLYYLEYIYI--------MNKNTL 371

Query: 145 CMVSGGIEIQSCNVSSSYTYTGS 167
            ++S  I+    N SS YTYT S
Sbjct: 372 NLLSYNIQKTDINSSSKYTYTKS 394



>EAY09792.1 on AAL38219  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2969

 Score = 29.3 bits (64), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 16/83 (19%)

Query: 93  RIYSDDSSVSSEFTKGVYS-----YSEISAYESFKNKIIYSS---IENAGKSNRLGSGTI 144
            IY DD S S  F K V +     Y  IS++ S + ++ Y     I        +   T+
Sbjct: 320 EIYIDDKSFSYTFLKDVINNKIDIYKTISSFISTQKQLYYLEYIYI--------MNKNTL 371

Query: 145 CMVSGGIEIQSCNVSSSYTYTGS 167
            ++S  I+    N SS YTYT S
Sbjct: 372 NLLSYNIQKTDINSSSKYTYTKS 394



>EAY09792.1 on AAL38222  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2976

 Score = 29.3 bits (64), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 16/83 (19%)

Query: 93  RIYSDDSSVSSEFTKGVYS-----YSEISAYESFKNKIIYSS---IENAGKSNRLGSGTI 144
            IY DD S S  F K V +     Y  IS++ S + ++ Y     I        +   T+
Sbjct: 320 EIYIDDKSFSYTFLKDVINNKIDIYKTISSFISTQKQLYYLEYIYI--------MNKNTL 371

Query: 145 CMVSGGIEIQSCNVSSSYTYTGS 167
            ++S  I+    N SS YTYT S
Sbjct: 372 NLLSYNIQKTDINSSSKYTYTKS 394



>EAY09792.1 on AAL38218  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2977

 Score = 29.3 bits (64), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 16/83 (19%)

Query: 93  RIYSDDSSVSSEFTKGVYS-----YSEISAYESFKNKIIYSS---IENAGKSNRLGSGTI 144
            IY DD S S  F K V +     Y  IS++ S + ++ Y     I        +   T+
Sbjct: 320 EIYIDDKSFSYTFLKDVINNKIDIYKTISSFISTQKQLYYLEYIYI--------MNKNTL 371

Query: 145 CMVSGGIEIQSCNVSSSYTYTGS 167
            ++S  I+    N SS YTYT S
Sbjct: 372 NLLSYNIQKTDINSSSKYTYTKS 394



>EAY09792.1 on AAL38220  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2957

 Score = 29.3 bits (64), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 16/83 (19%)

Query: 93  RIYSDDSSVSSEFTKGVYS-----YSEISAYESFKNKIIYSS---IENAGKSNRLGSGTI 144
            IY DD S S  F K V +     Y  IS++ S + ++ Y     I        +   T+
Sbjct: 320 EIYIDDKSFSYTFLKDVINNKIDIYKTISSFISTQKQLYYFEYIYI--------MNKNTL 371

Query: 145 CMVSGGIEIQSCNVSSSYTYTGS 167
            ++S  I+    N SS YTYT S
Sbjct: 372 NLLSYNIQKTDINSSSKYTYTKS 394



>EAY09792.1 on XP_815192   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 722

 Score = 26.9 bits (58), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 2/54 (3%)

Query: 45  ITQGAIKIISNTLATKLLCDTSEFISCSRYG--GEGGSILFKEKGQCVQDRIYS 96
           IT G    +S T          EF S    G   EGG+++F    Q V D +YS
Sbjct: 243 ITWGTPTSLSQTTLKPPKAGLKEFASSGGSGVLMEGGTLVFPLMAQSVNDVVYS 296




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09794.1 CMGC family protein kinase [Trichomonas
vaginalis G3]
         (468 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    44   1e-05
AAY44831  MSA-1  (Invasion)  [Babesia bovis]                           26   3.9  
CAA70921  MIC5  (Others)  [Toxoplasma gondii]                          26   5.4  

>EAY09794.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 43.9 bits (102), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 6/113 (5%)

Query: 229 LFAALNDCHSQKIYHGKINSRNILVDPALIHASFKLADFSSCNLFEKFKKSPKRLIER-- 286
           L  A+N CHSQ I H  I   N+++D        +L D+     +   ++   R+  R  
Sbjct: 156 LLKAMNYCHSQGIMHRDIKPHNVMIDHE--KKILRLIDWGLAEFYHPEQEYSVRVATRYY 213

Query: 287 -TPEEILVYKAYPDKIDIWNAALTLANIALGT-PLIQGKNPKSIIFEIRRISG 337
             PE ++  + Y   +DIW+    LA I     P   G +    + +I ++ G
Sbjct: 214 KGPELLVDMRYYDYSLDIWSIGCMLAGIIFKKEPFFYGHDNYDQLVKIAKVLG 266



>EAY09794.1 on AAY44831  MSA-1  (Invasion)  [Babesia bovis]
          Length = 310

 Score = 26.2 bits (56), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 9/23 (39%), Positives = 15/23 (65%)

Query: 420 LMKLFNDQNFVDFLLKCFSWKPE 442
           LM +FN+ + +D  LK   W+P+
Sbjct: 131 LMSMFNNIHHMDKFLKSLKWEPQ 153



>EAY09794.1 on CAA70921  MIC5  (Others)  [Toxoplasma gondii]
          Length = 231

 Score = 25.8 bits (55), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 12/50 (24%), Positives = 30/50 (60%), Gaps = 3/50 (6%)

Query: 383 TEEEEDNYEEEVEEMIEEEEEEEEKQQGEILIPKK---RDLMKLFNDQNF 429
           T+ E   ++EE++E +EE + E++ +   +++ +K   ++  K+   Q+F
Sbjct: 130 TQSEMKEFQEEIKEGVEETKHEDDPEMTRLMVTEKQESKNFSKMAKSQSF 179




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09796.1 cytosolic cyclophilin, putative [Trichomonas
vaginalis G3]
         (172 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_816556   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   3.3  
XP_811362   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   4.7  
XP_001349219  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   4.8  
XP_809010   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   5.8  
XP_807444   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   6.2  

>EAY09796.1 on XP_816556   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 807

 Score = 24.6 bits (52), Expect = 3.3,   Method: Composition-based stats.
 Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 3/25 (12%)

Query: 148 KALEKCGSDQGK---TSKKCVITDC 169
           KALEKC S +GK    S  C  + C
Sbjct: 147 KALEKCSSQEGKCPSQSTNCAGSQC 171



>EAY09796.1 on XP_811362   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 524

 Score = 24.3 bits (51), Expect = 4.7,   Method: Composition-based stats.
 Identities = 9/12 (75%), Positives = 11/12 (91%)

Query: 148 KALEKCGSDQGK 159
           KALEKC S++GK
Sbjct: 152 KALEKCSSEEGK 163



>EAY09796.1 on XP_001349219  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2595

 Score = 24.3 bits (51), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 13/51 (25%)

Query: 109  ANAGPNTNGSQFFITTVPCPWLDGKHCVFGEVVEGMDVVKALEKCGSDQGK 159
             +A  N NG++F+     CP             E  D ++ LE C  D G+
Sbjct: 1332 TDAEGNNNGNEFYTKLEECP-------------EVKDFLQKLEPCKKDNGE 1369



>EAY09796.1 on XP_809010   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 774

 Score = 23.9 bits (50), Expect = 5.8,   Method: Composition-based stats.
 Identities = 9/12 (75%), Positives = 11/12 (91%)

Query: 148 KALEKCGSDQGK 159
           KALEKC S++GK
Sbjct: 152 KALEKCSSEEGK 163



>EAY09796.1 on XP_807444   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 777

 Score = 23.9 bits (50), Expect = 6.2,   Method: Composition-based stats.
 Identities = 9/12 (75%), Positives = 11/12 (91%)

Query: 148 KALEKCGSDQGK 159
           KALEKC S++GK
Sbjct: 154 KALEKCSSEEGK 165




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09797.1 hypothetical protein TVAG_137890 [Trichomonas
vaginalis G3]
         (472 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_812311   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   8.3  

>EAY09797.1 on XP_812311   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 924

 Score = 25.4 bits (54), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 4/60 (6%)

Query: 326 PIKSNSMEFPGPGQYKTTKSLLGNTNRPSSVFASKVSRVSDPSTEVPGPGRYTPLITDTS 385
           PI+ N+++  G G+ +  + LLG+    S       S VS+  T   G G  T L+ + S
Sbjct: 731 PIEGNAIQPSGGGRPEEQRQLLGS----SGADGVSASTVSNARTSSGGEGSATQLVKEES 786




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09799.1 hypothetical protein TVAG_137910 [Trichomonas
vaginalis G3]
         (406 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09800.1 hypothetical protein TVAG_137920 [Trichomonas
vaginalis G3]
         (123 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351564  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   5.2  
XP_001349738  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   5.5  
XP_966307  PfEMP1  (Establishment)  [Plasmodium falciparum]            23   7.2  

>EAY09800.1 on XP_001351564  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2207

 Score = 23.5 bits (49), Expect = 5.2,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 3/37 (8%)

Query: 7   VDLLAKQTHAAAIISVEGALCAKTNNFSATPTNMIHW 43
           +DLL K T    ++   G LC   N+ S     M +W
Sbjct: 536 IDLLVKDTSGTTMVEKLGGLC---NDSSKRTVQMENW 569



>EAY09800.1 on XP_001349738  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2162

 Score = 23.5 bits (49), Expect = 5.5,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 3/37 (8%)

Query: 7   VDLLAKQTHAAAIISVEGALCAKTNNFSATPTNMIHW 43
           +DLL K T    ++   G LC   N+ S     M +W
Sbjct: 536 IDLLVKDTSGTTMVEKLGGLC---NDSSKRTVQMENW 569



>EAY09800.1 on XP_966307  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2238

 Score = 23.1 bits (48), Expect = 7.2,   Method: Composition-based stats.
 Identities = 9/30 (30%), Positives = 13/30 (43%)

Query: 71  SKNYIHAMQDEWNVYMKKTNTVVVISVCGG 100
           + NY    +D WN+  KK    +     GG
Sbjct: 241 TTNYYQLREDWWNINRKKVWDAITCGAAGG 270




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09803.1 viral A-type inclusion protein, putative
[Trichomonas vaginalis G3]
         (1049 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001610196  variant erythrocyte surface antigen-1, alpha subun...    28   4.2  
XP_966305  PfEMP1  (Establishment)  [Plasmodium falciparum]            27   7.0  
XP_804086   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   7.4  
XP_966307  PfEMP1  (Establishment)  [Plasmodium falciparum]            27   9.6  

>EAY09803.1 on XP_001610196  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1330

 Score = 27.7 bits (60), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 43/195 (22%), Positives = 72/195 (36%), Gaps = 32/195 (16%)

Query: 380 KNKSLTKDLEQQKSQNEDLTHHLDEKTKECNETTEKLNNQTNTNRDLSTKLKNLTQEGNE 439
           KN    K+LE+ K + E+LT           E  +KL   TN N D       ++   ++
Sbjct: 738 KNGLNGKELEEAKKKLEELTTKGGGNNGILGEVVDKLGEATNGNNDFDQGKNKISAAIDK 797

Query: 440 QKEKINDLQNKLDKKTEEN----------NNLSQKLNQ-----KSQELEQTKSNG----- 479
            +E + ++Q +L      +          N L + ++Q      S +    KS+      
Sbjct: 798 VREILGEIQKELGVSDSTHLKGTLSEWVANTLHKTIDQIKDICNSPKCPSCKSHSNKCGR 857

Query: 480 -------DDLKQQLEDNIKEEKQKS--DKLQKNLNDQEIVISDQKDKIKELSSNLENTN- 529
                  D   QQ  D      Q    D+L    + QEI+ ++  DK    +S+L + N 
Sbjct: 858 QPQSKYCDKCHQQYMDGFPSPLQAFLEDRL-PGFSCQEILYTEDADKYPPAASHLGHCNG 916

Query: 530 -NQLTQLKNDSKQQI 543
             Q   L    + Q 
Sbjct: 917 SGQCCPLPMGFRGQF 931



>EAY09803.1 on XP_966305  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3954

 Score = 26.9 bits (58), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 3/78 (3%)

Query: 227  KQQIE-DMQSQYFAENAKYESIQKKYDSHVPRLQKELQNQVNENESLAN--KLSARVKEI 283
            KQQ++ +MQ        KY  I+ + D H   LQ   + ++  N  + +  +LS++  E+
Sbjct: 2972 KQQLKLNMQIPCMTHFDKYGIIENRIDVHPNCLQGLGKYEIWSNNRIPDWERLSSKFNEV 3031

Query: 284  KDLKSKNMKALSVIDQMK 301
            K   ++N+K L+  + +K
Sbjct: 3032 KGTMNENVKKLTAYEYLK 3049



>EAY09803.1 on XP_804086   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 742

 Score = 26.9 bits (58), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 8/68 (11%)

Query: 62  ELFYQIITDD--RELFISKIMEKLQAYENVYREEYGEMIKVLGNRILSVSDAQNSGALSR 119
           EL      DD  R ++ S  M       N++ EEY  + +V GN    V      G +S 
Sbjct: 13  ELIMMTSCDDGSRRVYRSSTMG------NLWTEEYDTLSRVWGNSRTRVGHGAQGGFVSA 66

Query: 120 MRHIQTLI 127
           M   Q +I
Sbjct: 67  MIDGQKVI 74



>EAY09803.1 on XP_966307  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2238

 Score = 26.6 bits (57), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 10/93 (10%)

Query: 942  KAINELKKTVIQLTEKNVKERDESQKQIQDLETEISNLKEQIKIEKDLRREIGRIGQGIT 1001
            K +   KKT I+    N K     +  +Q  +TE + +KE    +KD+ ++ G +G  I 
Sbjct: 621  KCLQNDKKTCIRKCNDNCKCY---ESWVQQKKTEWNAIKEHFDQQKDICQQQGILGDRIK 677

Query: 1002 ADKAILKSKLSAQEFRFI-------EFIEGVMK 1027
            +   +L+  L  + F  I       + IEG+ K
Sbjct: 678  SPYFVLELVLELEYFPLIKEAYGDAQAIEGINK 710




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09806.1 hypothetical protein TVAG_138000 [Trichomonas
vaginalis G3]
         (98 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_812607   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   4.2  

>EAY09806.1 on XP_812607   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 957

 Score = 23.1 bits (48), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 27  DAVTVKLTCADSSKECKIHVIQESISGLQWQSYVTALSNGE 67
           DA T+K+T  ++SK+        SI G Q Q+    L   E
Sbjct: 747 DAKTMKVTAPEASKQATTEAGTPSILGGQQQTEQDPLKKSE 787




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09811.1 hypothetical protein TVAG_138050 [Trichomonas
vaginalis G3]
         (90 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_815318   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   3.6  
XP_804269   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   7.6  

>EAY09811.1 on XP_815318   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 587

 Score = 23.1 bits (48), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 12/38 (31%), Positives = 21/38 (55%)

Query: 3   DAPDSKADESFHTEVTLAAPFGVLAGNEKADPTLSYTS 40
           D P+ + +ES    V  A  F V+AG+  ++P ++  S
Sbjct: 293 DDPEKQEEESADDPVPAAPSFTVVAGSSVSEPAIAVES 330



>EAY09811.1 on XP_804269   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 525

 Score = 21.9 bits (45), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 6/45 (13%)

Query: 36  LSYTSE------KEGDKLMFPKFAGWIPKKVGVYALSDLTNEADL 74
           LSYT++       +GDK +  +   W+PKK    AL    N+A +
Sbjct: 290 LSYTADNKWETISKGDKKLTTESRPWVPKKEHQVALMLQGNKASV 334




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09812.1 hypothetical protein TVAG_138060 [Trichomonas
vaginalis G3]
         (501 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAA29462  ABRA  (Others)  [Plasmodium falciparum]                      27   4.1  
XP_808213   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   4.8  
XP_808840   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   4.8  
XP_817993   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   5.3  

>EAY09812.1 on AAA29462  ABRA  (Others)  [Plasmodium falciparum]
          Length = 743

 Score = 26.6 bits (57), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 17/52 (32%), Positives = 36/52 (69%), Gaps = 4/52 (7%)

Query: 433 SNDLNLIKKILESIY-LLMNYSR-NFCLDNLIRDDFMQNEIL--ETIDELDQ 480
           +ND+ +IK+ L++IY  LMNY+  N  +  + + + ++N++L  ET +E+++
Sbjct: 602 NNDIQIIKQELQAIYNELMNYTNGNKNIQQIFQQNILENDVLNQETEEEMEK 653



>EAY09812.1 on XP_808213   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 819

 Score = 26.2 bits (56), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 11/24 (45%), Positives = 14/24 (58%)

Query: 122 DNKIIQELLNILAYIGFSSDEVCT 145
           D ++ Q    +LA  GFSSD  CT
Sbjct: 480 DKRVSQLCTTLLAQKGFSSDNACT 503



>EAY09812.1 on XP_808840   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 821

 Score = 26.2 bits (56), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 11/24 (45%), Positives = 14/24 (58%)

Query: 122 DNKIIQELLNILAYIGFSSDEVCT 145
           D ++ Q    +LA  GFSSD  CT
Sbjct: 481 DKRVSQLCTTLLAQKGFSSDNACT 504



>EAY09812.1 on XP_817993   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 830

 Score = 26.2 bits (56), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 20/94 (21%), Positives = 39/94 (41%), Gaps = 14/94 (14%)

Query: 52  QNKQSDTQQVDSYDEFLNSLDLTCILSPDPKIRLIELRNLSAALDRGYDINQIDHEILEL 111
           ++ +S   + +  +E +   +       +P   ++ +R L+A L R  ++     E+   
Sbjct: 430 KSGKSGKSKTNGKEELIALYEKKKADGENPSPGMVSVR-LTAQLKRVKEVVATWKEV--- 485

Query: 112 IFRRVCNGNSDNKIIQELLNILAYIGFSSDEVCT 145
                     D ++ Q    +LA  GFSSD  CT
Sbjct: 486 ----------DERVSQLCTTLLAQKGFSSDNACT 509




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09814.1 hypothetical protein TVAG_138080 [Trichomonas
vaginalis G3]
         (734 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_827760  VSG  (Establishment)  [Trypanosoma brucei]                  27   5.0  
XP_805383   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   8.8  

>EAY09814.1 on XP_827760  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 536

 Score = 26.9 bits (58), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 17/57 (29%), Positives = 28/57 (49%)

Query: 238 LAFSLCVLNPHSSSRNIVSISSCYEMVSYCHLIPMAEDFKYLASQTDLDTAQLDDLV 294
           LA  + VL+P S   N+    +  E  + C LI +AE      + T   +A+ D+L+
Sbjct: 11  LATLIVVLSPSSIYANVGPGDNAAEFTTLCQLISLAEGAAQPPAATTAPSAEYDELM 67



>EAY09814.1 on XP_805383   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 414

 Score = 25.8 bits (55), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 4/68 (5%)

Query: 439 VVSKTYDIDPSGKTEIASPFGGIVYITVRELNEETDNRVKLKFNGFVRHPRAVIRKPEIW 498
           V S T +  PSGKT + +  G   Y     L+   D + +  F G  + P    R    W
Sbjct: 220 VASVTIEKAPSGKTLLTATLGDTNYNHTMGLSYTADKKWETIFKGD-KKPTTESRP---W 275

Query: 499 ESSKDYQV 506
           E  K++QV
Sbjct: 276 EPKKEHQV 283




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09815.1 hypothetical protein TVAG_138090 [Trichomonas
vaginalis G3]
         (677 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001352242  PfEMP1  (Establishment)  [Plasmodium falciparum]         32   0.11 
XP_810563   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   2.5  
XP_844694  VSG  (Establishment)  [Trypanosoma brucei]                  26   8.0  

>EAY09815.1 on XP_001352242  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2264

 Score = 32.3 bits (72), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 12/56 (21%)

Query: 321 LKKYFTKEICSKIQNISDPACSAFVTGKLNFE----SSEGRLAAIAGEFYLSKYLE 372
           LKK   +EIC+K+Q+           GK+NFE     + G      G FY SKY +
Sbjct: 454 LKKLSNEEICTKVQDTE--------GGKINFENVNSGASGTNVESQGTFYRSKYCQ 501



>EAY09815.1 on XP_810563   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 868

 Score = 27.7 bits (60), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 15/83 (18%)

Query: 537 VLPIYFDNENLKNAMYPEIIEKVH--NFG-------AVARTLLSLFLEKSDTSLEEIKAP 587
            LP+Y DN+N K  ++  + +  H  + G       A A +LL     K+D + EE+ A 
Sbjct: 376 TLPVYADNDNEKGKLHLWLTDNTHIVDIGLVSGEDDAAASSLL-YNSGKTDDNDEELIA- 433

Query: 588 EWKPFVEYIKSEGKVVPEQCNMF 610
                 E  K EGK  P   ++F
Sbjct: 434 ----LYERQKKEGKPSPGMVSVF 452



>EAY09815.1 on XP_844694  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 491

 Score = 26.2 bits (56), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 634 KLLDEASKPMQVDTQMLTKDLEERLEKENQSINKSIQ 670
           KL D A KP + + +  TK  EE+ EKE  +  K  Q
Sbjct: 385 KLADTAKKPREAEAKTATKSAEEK-EKECNTKGKDKQ 420




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09824.1 gp13, putative [Trichomonas vaginalis G3]
         (355 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001349437  PfEMP1  (Establishment)  [Plasmodium falciparum]         32   0.067
XP_803373  VSG  (Establishment)  [Trypanosoma brucei]                  25   7.8  
XP_803371  VSG  (Establishment)  [Trypanosoma brucei]                  25   8.0  

>EAY09824.1 on XP_001349437  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2231

 Score = 32.0 bits (71), Expect = 0.067,   Method: Composition-based stats.
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)

Query: 16   EKVFVKDNQLIFDYPCENSSHCTDYIVHMPRGTYKF-ELYGASGGSSRGNVSSYRDK 71
            EKV V+D  +  D     ++ C  Y   + R  Y+F E Y A GG     V+  +DK
Sbjct: 1266 EKVLVEDANIFSDLSSSCATPCRKYRKWIERKKYEFTEQYNAYGGQKNNYVNEQKDK 1322



>EAY09824.1 on XP_803373  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 499

 Score = 25.0 bits (53), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 2/50 (4%)

Query: 123 GVFGYKPGTMTEEQNFEKDNMQPGGYGGGGSSSNYFGIDESSTLIYGSGS 172
            VFG++  T  +E+NF  D       GGG + +    + ++   + G+ S
Sbjct: 158 AVFGHETATEAKEENF--DTRANACNGGGNAKAASQNLAQALACVCGTAS 205



>EAY09824.1 on XP_803371  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 487

 Score = 25.0 bits (53), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 17/89 (19%)

Query: 206 DGSGGSGGNLTAQGWFRFSELKSSHL--ANSSFGFAFGQGEAARYTTALNNRSVQNAGKF 263
           +G+GG     TA         K  HL  A++S GFA G+G AA  T          AG  
Sbjct: 202 EGTGGDKHQPTAAS-------KECHLTTAHTSKGFAKGEGTAAAVTVM--------AGYL 246

Query: 264 DIAGAGGGWFGGFSSQDGSSGSGGGSSWA 292
            I  +         +   ++  GG ++W+
Sbjct: 247 TIPNSAAELTAATKANLITASEGGIAAWS 275




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09825.1 glycine-rich protein, putative [Trichomonas
vaginalis G3]
         (368 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351513  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   0.71 
XP_001351514  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   0.71 
XP_001351435  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   4.7  
XP_805365   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   9.4  

>EAY09825.1 on XP_001351513  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2152

 Score = 28.5 bits (62), Expect = 0.71,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 31/80 (38%), Gaps = 13/80 (16%)

Query: 129 TDNPCSPSSFEKGNMQPGGYGGGGSSSDHPYGTGCGGGQTAVKFQYNDLWHRVLVSGAGG 188
           T +PC    F+   +  G   GG ++ D P G G G G+   +F   +          G 
Sbjct: 63  TKDPCI---FDYSKLINGSGSGGVTARDDPCGNGSGKGEDVSRFSDKE----------GA 109

Query: 189 GCDDNTDDDGSGGSGGNLTA 208
            C ++     S GS G   A
Sbjct: 110 QCANSKIHGNSKGSNGGACA 129



>EAY09825.1 on XP_001351514  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2201

 Score = 28.5 bits (62), Expect = 0.71,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 31/80 (38%), Gaps = 13/80 (16%)

Query: 129 TDNPCSPSSFEKGNMQPGGYGGGGSSSDHPYGTGCGGGQTAVKFQYNDLWHRVLVSGAGG 188
           T +PC    F+   +  G   GG ++ D P G G G G+   +F   +          G 
Sbjct: 63  TKDPCI---FDYSKLINGSGSGGVTARDDPCGNGSGKGEDVSRFSDKE----------GA 109

Query: 189 GCDDNTDDDGSGGSGGNLTA 208
            C ++     S GS G   A
Sbjct: 110 QCANSKIHGNSKGSNGGACA 129



>EAY09825.1 on XP_001351435  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2209

 Score = 25.8 bits (55), Expect = 4.7,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 2/44 (4%)

Query: 129 TDNPCSPSSFEKGNMQPGGYGGGGSSSDHPYGTGCGGGQTAVKF 172
           TD+PC   S  K      G G G ++  HP G   G G+   +F
Sbjct: 59  TDDPCQLES--KYTELISGSGSGVAARGHPCGNVSGKGEDVSRF 100



>EAY09825.1 on XP_805365   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 144

 Score = 24.3 bits (51), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 131 NPCSPSSFEKGNMQPGGYGGGGSSSDHPYGT--GCGGGQTAVKFQ 173
           NP S +S  KG  QP     GG+SS    GT  G  G +  V+ Q
Sbjct: 47  NPKSHASESKGQEQPAVATEGGASSGENEGTTGGADGQEEDVQPQ 91




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09836.1 TLD family protein [Trichomonas vaginalis G3]
         (557 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_966305  PfEMP1  (Establishment)  [Plasmodium falciparum]            27   3.2  
XP_804106   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   3.7  
AAM47175  Rh4  (Adhesin)  [Plasmodium falciparum]                      26   7.8  

>EAY09836.1 on XP_966305  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3954

 Score = 27.3 bits (59), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 9/104 (8%)

Query: 284  LDTFSGFSKPQNLRTFLKESFSIYMSRKKHLFGLERIETDN-------NKISETIKNTKM 336
             DT +G  K        +E  S  +S+KK  + +++ + DN       NK +E   N   
Sbjct: 3315 CDTSNGTVKETKCTKACEEYKSYVLSKKKEYY-IQKDKYDNQFKKVLNNKDAEEFLNVHC 3373

Query: 337  IASIFNDQIRGDFNPLDFPRKLNLNVLSDLANIIPSEEIVKYQK 380
            ++  F D+ R   NP +      L    D   +IP+   VK +K
Sbjct: 3374 LSEYFKDETRWK-NPYESIADKALKGKCDCKKMIPTTPEVKPKK 3416



>EAY09836.1 on XP_804106   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1006

 Score = 26.9 bits (58), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 15/53 (28%), Positives = 20/53 (37%)

Query: 492 HPRPPNKDYLSVDDDTIMIGGPNPAIIIGDRLDKVRSCKCDTFDSPQLTLEPS 544
           HP PP  D  +VD +      P+ A+      D   S +    D      EPS
Sbjct: 865 HPAPPTSDEQTVDPEERKDTNPHTAVGASSGPDSSHSIEVAPLDGATAAHEPS 917



>EAY09836.1 on AAM47175  Rh4  (Adhesin)  [Plasmodium falciparum]
          Length = 1711

 Score = 25.8 bits (55), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 9/79 (11%)

Query: 383 QRKFNEIEIIHEGRLLDTKNY-FVIKEYIPFIYLRQ-NPSLSYSLSKD-----GTILQTL 435
           Q K+  I  I+    ++ K Y ++IK Y  F YL+  N SL  S+ K         ++ L
Sbjct: 374 QNKY--IHFINSNNAVNAKEYEYIIKYYTTFKYLQTLNKSLYDSIYKHKINNYSHNIEDL 431

Query: 436 LNEMKKKGAHILIIKTDKS 454
           +N+++ K  +++II  DK+
Sbjct: 432 INQLQHKINNLMIISFDKN 450




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09840.1 hypothetical protein TVAG_259210 [Trichomonas
vaginalis G3]
         (934 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_811031   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   2.6  
XP_845133  VSG  (Establishment)  [Trypanosoma brucei]                  27   5.1  
XP_845634  VSG  (Establishment)  [Trypanosoma brucei]                  27   5.5  
XP_812154   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   9.7  

>EAY09840.1 on XP_811031   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 785

 Score = 28.1 bits (61), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 15/27 (55%), Positives = 16/27 (59%), Gaps = 5/27 (18%)

Query: 536 KIFEIKSKNNFENEIKSENDEYKSIYN 562
           KIF I SKNNF NE       Y S+YN
Sbjct: 151 KIFLIVSKNNFGNET-----SYTSLYN 172



>EAY09840.1 on XP_845133  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 500

 Score = 27.3 bits (59), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 10/81 (12%)

Query: 140 KSKKNIENNVNILNETQQKELKEVEIESDKKLQLFK---ANSRVRIEQLRVDHNKL-IEE 195
           K  K  E N NI N  Q+K+       +DK +Q+++   A +R  + +L  D  K+ +  
Sbjct: 30  KPAKGTEANTNIKNPCQEKKF------NDKLIQIYEASLAGARRTLAELASDSRKIKLAL 83

Query: 196 LKNQQKNVKISPNFLKKLENY 216
            K Q  N   +   L+ L +Y
Sbjct: 84  CKEQDANRASALTLLETLTDY 104



>EAY09840.1 on XP_845634  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 461

 Score = 26.9 bits (58), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 15/68 (22%)

Query: 664 EEFLK--------ILENNFKNQLENGQNTINSIVNSMDYNENQLIYQKQLENSENLANLA 715
           ++FLK        +++ N   +L+  Q  I  I+NS   +EN+ IY K       L N A
Sbjct: 71  DDFLKDANGKYKDLMQGNDAAKLKAWQQHITEIINSKHGDENKQIYAK-------LTNKA 123

Query: 716 EKRSKQEI 723
           +K S Q I
Sbjct: 124 QKASAQAI 131



>EAY09840.1 on XP_812154   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 175

 Score = 25.8 bits (55), Expect = 9.7,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)

Query: 818 EMMKRKEIENETFMRSLMNRLSKELIKIQMKNKEKIEKFDEKIESLEKDLNQLSSTFDLS 877
           E   +KE E  TF       L+K+  K   + +E ++   + I+ LEKD +Q     D+S
Sbjct: 107 EAQCKKEEEENTFTGIASQILTKKTTK---EPEEVLKDAKKDIQVLEKDASQGKKKVDVS 163

Query: 878 RP 879
           RP
Sbjct: 164 RP 165




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09841.1 hypothetical protein TVAG_259220 [Trichomonas
vaginalis G3]
         (138 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_807074   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   5.0  

>EAY09841.1 on XP_807074   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 822

 Score = 23.9 bits (50), Expect = 5.0,   Method: Composition-based stats.
 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 1/72 (1%)

Query: 15  TQTTNPNINTNNTGFNHV-SGQNAFDFHGLARSADVTETYLDGSPSISIHDLWFAIGTYK 73
           T +T      N+T    V SG N+     LA S++ T +   GS + S   + FA G Y+
Sbjct: 726 TSSTPVGSGANSTSSTPVDSGANSTFSSLLAGSSNSTSSTPVGSSAKSTPSMPFAGGVYR 785

Query: 74  PYLMNYIPGPFS 85
            + +    G FS
Sbjct: 786 NFFVFVDGGAFS 797




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09842.1 Ser/Thr protein phosphatase, putative
[Trichomonas vaginalis G3]
         (339 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09843.1 hypothetical protein TVAG_259240 [Trichomonas
vaginalis G3]
         (404 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_802364   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           31   0.13 
XP_804432   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.34 
XP_812751   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.2  
XP_812613   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   6.3  

>EAY09843.1 on XP_802364   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 327

 Score = 30.8 bits (68), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)

Query: 197 EKKEEKPQNED-QFSLKKEFEEKLEPNGDENQESTPENQNTEEEKPANEEPPKDTQY 252
            K E KP  E   + LKKE++  L   G+++      N   EEE P  +E P +  Y
Sbjct: 136 SKGETKPTTESGTWELKKEYQVALMLQGNKSSVYVDGNSLGEEEAPLTDETPLELLY 192



>EAY09843.1 on XP_804432   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 799

 Score = 29.6 bits (65), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%)

Query: 197 EKKEEKPQNED-QFSLKKEFEEKLEPNGDENQESTPENQNTEEEKPANEEPPKDTQY 252
            K E KP  E   + LKKE++  L   G+++          EEE P  +E P +  Y
Sbjct: 617 SKGETKPTTESGTWELKKEYQVALMLQGNKSSVYVDGKSLGEEEAPLTDETPLELLY 673



>EAY09843.1 on XP_812751   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 952

 Score = 26.9 bits (58), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 50/130 (38%), Gaps = 35/130 (26%)

Query: 163 GFVAEIDSKVEDENKHPEEEAQKEEQQEKETAEEEKKEEKPQN----------------- 205
           G VA  D  V  E+K  E  A  EE  E +T   +K+EE   N                 
Sbjct: 722 GQVASTDVSVASESKSEESAASYEELTESDT---DKQEEGIVNDPVPAAPSSTLVAGASI 778

Query: 206 ----------EDQFSLKKEFEEKLEPNGDENQESTPENQNTEEEKPANEEPPKDTQYTGL 255
                     E+ FS     E+  +P+GDE    T  N+  E  +  ++  P+D Q   L
Sbjct: 779 SESAIAAQSAENSFS-----EDNAQPSGDETSWQTTLNEAKESMQRDSDVQPQDLQSEKL 833

Query: 256 TINDHVEEVS 265
           T+   VE  S
Sbjct: 834 TVFSDVENSS 843



>EAY09843.1 on XP_812613   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1038

 Score = 25.8 bits (55), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 47/127 (37%), Gaps = 29/127 (22%)

Query: 163 GFVAEIDSKVEDENKHPEEEAQKEEQQEKETAEEE------------------------K 198
           G V   D  V  E+K  E  A  EE  E +T E+E                         
Sbjct: 716 GQVTSTDVSVASESKSEESAASYEELTESDTDEQEEGIVNGPVPAASSSTLFAGASISES 775

Query: 199 KEEKPQNEDQFSLKKEFEEKLEPNGDENQESTPENQNTEEEKPANEEPPKDTQYTGLTIN 258
                  E+ FS     E+  +P+GDE    T  N+  E  +  ++  P+D Q   LT+ 
Sbjct: 776 AIAAQSAENSFS-----EDNAQPSGDETSWQTTLNEAKESMQRDSDVQPQDLQSEKLTVF 830

Query: 259 DHVEEVS 265
             VE+ S
Sbjct: 831 SDVEKSS 837




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09850.1 hypothetical protein TVAG_259310 [Trichomonas
vaginalis G3]
         (2792 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_814929   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   5.3  
AAK69358  P0  (Invasion)  [Toxoplasma gondii]                          28   6.0  

>EAY09850.1 on XP_814929   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 833

 Score = 28.9 bits (63), Expect = 5.3,   Method: Composition-based stats.
 Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 7/87 (8%)

Query: 553 APPADQILSARAPRNKSGNIK--SQKGDKKGKNAKTFKTKPTTNAEIAECSKP-----LS 605
           AP    +L+A     +   I   S   D K +     +TKPTT +   E +K      + 
Sbjct: 584 APSEKTLLTAMLANTEPPYIMRLSYTADNKWETMPKGETKPTTESRPWEPNKEHQVALML 643

Query: 606 PSQQLSVFMDKEKLEFGEVPVTAKKIL 632
              + SV++D E L   EVP+T +K L
Sbjct: 644 QGNKASVYIDGESLGEEEVPLTDEKPL 670



>EAY09850.1 on AAK69358  P0  (Invasion)  [Toxoplasma gondii]
          Length = 314

 Score = 28.5 bits (62), Expect = 6.0,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 28/65 (43%)

Query: 1255 KPMSFSTMIAIVDSQGSSYNVTVSVCTDNSVFTLYPVLSFSCFNISNILGRPITASTKNQ 1314
            KP  +   I  V   GS Y  +V   TD  +   +   + +   +S  +G P TAS  + 
Sbjct: 182  KPFEYGLAIQHVYDDGSVYKASVLDITDEVILEKFRAGTMNVAALSREVGFPTTASAPHS 241

Query: 1315 IPDDF 1319
            I + F
Sbjct: 242  ILEAF 246




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09855.1 Tubulin-tyrosine ligase family protein
[Trichomonas vaginalis G3]
         (418 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001611736  variant erythrocyte surface antigen-1, alpha subun...    28   1.2  
XP_001350082  Rh2b  (Adhesin)  [Plasmodium falciparum]                 26   5.4  
XP_806381   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   5.4  
XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 25   8.3  

>EAY09855.1 on XP_001611736  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1365

 Score = 28.1 bits (61), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 17/81 (20%), Positives = 31/81 (38%), Gaps = 6/81 (7%)

Query: 79  NQMRRLFTNFYKFFPLSFLLPHQFTDFQREHEKLQHLLRKPVTWIVKPRSGCCGHGIKLI 138
           N +       +K      LL    T      E L   +++ ++    P+   C       
Sbjct: 820 NAVSAAIDGLHKVLEALLLLKDTSTRLDGHKEALLKAIKELISICNSPKCSACD------ 873

Query: 139 QHVYEIGRKAESVVIQRYVAP 159
           QH  + G+KAES + ++ + P
Sbjct: 874 QHSTKCGQKAESTICEKCLQP 894



>EAY09855.1 on XP_001350082  Rh2b  (Adhesin)  [Plasmodium falciparum]
          Length = 1115

 Score = 25.8 bits (55), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)

Query: 300 YNKFFHILGIDIMLNEFLNPIVLELNDRPSMMVTFD 335
           +NK      IDI+ NEF N I  ++ND+   +V  D
Sbjct: 203 FNKINETQNIDILKNEF-NNIKTKINDKVKELVHVD 237



>EAY09855.1 on XP_806381   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1045

 Score = 25.8 bits (55), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 172 YVLISNLSPYTVYIY-KEGLARFCTEKYVPPSPDNLNDKFCHLTNTSINVENENPSTDFT 230
           +V ++N+  Y   ++  +GL   C  K   PSP           NT   V +E+ S + T
Sbjct: 683 HVTVTNVMLYNEKLFGDDGLYELCASKVTIPSPGVEEQPTGQAANTGALVASESRSEEIT 742

Query: 231 KL 232
            +
Sbjct: 743 AI 744



>EAY09855.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 25.4 bits (54), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)

Query: 300  YNKFFHILGIDIMLNEFLNPIVLELNDRPSMMVTFD 335
            +NK      IDI+ NEF N I  ++ND+   +V  D
Sbjct: 2342 FNKINETQNIDILKNEF-NNIKTKINDKVKELVHVD 2376




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09858.1 hypothetical protein TVAG_259390 [Trichomonas
vaginalis G3]
         (197 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351437  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   9.8  

>EAY09858.1 on XP_001351437  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2277

 Score = 23.9 bits (50), Expect = 9.8,   Method: Composition-based stats.
 Identities = 11/26 (42%), Positives = 14/26 (53%)

Query: 58  DTKGVLSDSNSDYYHYVPPIERIFED 83
           D KG  +D    Y+ YVP   R FE+
Sbjct: 305 DKKGKNTDQVPTYFDYVPQYLRWFEE 330




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09860.1 hypothetical protein TVAG_259410 [Trichomonas
vaginalis G3]
         (473 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_804142   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   6.3  
XP_804407   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   7.7  
XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]                 25   9.7  

>EAY09860.1 on XP_804142   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 928

 Score = 25.8 bits (55), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 7/72 (9%)

Query: 363 FVECGAN-KFAVTSEGETLIHIFTRNQNLEAVKYFMKYDYDINKKDKNGNTPLHLAVLNA 421
           F   GA  ++ V S+GE  ++ F  N N     + +     I+K  + GNTP+ L  +  
Sbjct: 550 FTRRGAGAEWPVGSQGENQLYHFA-NHN-----FTLVATVSIDKVPEEGNTPISLMGVKM 603

Query: 422 DFNTCEYLCNLS 433
           D N    L  LS
Sbjct: 604 DDNGKTVLLGLS 615



>EAY09860.1 on XP_804407   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 928

 Score = 25.4 bits (54), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 7/72 (9%)

Query: 363 FVECGAN-KFAVTSEGETLIHIFTRNQNLEAVKYFMKYDYDINKKDKNGNTPLHLAVLNA 421
           F   GA  ++ V S+GE  ++ F  N N     + +     I+K  + GNTP+ L  +  
Sbjct: 550 FTRRGAGAEWPVGSQGENQLYHFA-NHN-----FTLVATVSIDKVPEEGNTPISLMGVKM 603

Query: 422 DFNTCEYLCNLS 433
           D N    L  LS
Sbjct: 604 DDNGKTVLLGLS 615



>EAY09860.1 on XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]
          Length = 2112

 Score = 25.4 bits (54), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 7/56 (12%)

Query: 70   IFEKILQLQVIKDVNQNIAIDFFNIGEAIKSEYLMSFLLNNLKNDSITKENIFIRI 125
            I  K+L + V+ D + NI+ D +N+       Y+  F++N +  + ++K    I I
Sbjct: 1295 ICTKVLDIAVVLDQSSNISKDQWNV-------YIKQFVINTVNQNYLSKYRSHITI 1343




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09865.1 hypothetical protein TVAG_259460 [Trichomonas
vaginalis G3]
         (59 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09867.1 Thioredoxin family protein [Trichomonas
vaginalis G3]
         (118 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_810932   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   1.1  
XP_804487   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   1.4  
XP_817882   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   2.0  
XP_805710   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   4.7  
XP_808959   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   9.6  

>EAY09867.1 on XP_810932   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 753

 Score = 25.4 bits (54), Expect = 1.1,   Method: Composition-based stats.
 Identities = 8/15 (53%), Positives = 11/15 (73%)

Query: 29 TLVVLDIFWVWCGPC 43
          T++ L + WV CGPC
Sbjct: 47 TVLYLFVVWVCCGPC 61



>EAY09867.1 on XP_804487   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 752

 Score = 25.0 bits (53), Expect = 1.4,   Method: Composition-based stats.
 Identities = 8/20 (40%), Positives = 13/20 (65%)

Query: 24 VNSKETLVVLDIFWVWCGPC 43
          V +   L++L + W+ CGPC
Sbjct: 43 VFASTVLLLLVVMWMCCGPC 62



>EAY09867.1 on XP_817882   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 753

 Score = 24.6 bits (52), Expect = 2.0,   Method: Composition-based stats.
 Identities = 7/14 (50%), Positives = 11/14 (78%)

Query: 30 LVVLDIFWVWCGPC 43
          L++L + W+ CGPC
Sbjct: 49 LLLLFVMWMCCGPC 62



>EAY09867.1 on XP_805710   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 753

 Score = 23.5 bits (49), Expect = 4.7,   Method: Composition-based stats.
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 24 VNSKETLVVLDIFWVWCGPC 43
          V +   L +L + W+ CGPC
Sbjct: 43 VFTSAALHLLVVMWMCCGPC 62



>EAY09867.1 on XP_808959   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 246

 Score = 22.3 bits (46), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 7/18 (38%), Positives = 11/18 (61%)

Query: 26 SKETLVVLDIFWVWCGPC 43
          +   L +L + W+ CGPC
Sbjct: 45 TSAALHLLVVMWMCCGPC 62




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09880.1 hypothetical protein TVAG_373870 [Trichomonas
vaginalis G3]
         (289 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAW78133  TRAP  (Invasion)  [Plasmodium falciparum]                    27   1.1  
AAA29773  TRAP  (Invasion)  [Plasmodium falciparum]                    27   1.6  
AAQ11892  TRAP  (Invasion)  [Plasmodium falciparum]                    27   1.7  
AAW78172  TRAP  (Invasion)  [Plasmodium falciparum]                    27   1.7  
AAW78131  TRAP  (Invasion)  [Plasmodium falciparum]                    27   1.8  
AAW78171  TRAP  (Invasion)  [Plasmodium falciparum]                    27   1.9  
XP_818403   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.1  
XP_822017   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   2.4  
XP_001350413  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   5.6  
AAA29776  TRAP  (Invasion)  [Plasmodium falciparum]                    25   6.5  
AAQ11894  TRAP  (Invasion)  [Plasmodium falciparum]                    25   6.7  
AAA29774  TRAP  (Invasion)  [Plasmodium falciparum]                    25   6.8  
AAQ11895  TRAP  (Invasion)  [Plasmodium falciparum]                    25   6.8  
XP_821683   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   7.2  
AAW78167  TRAP  (Invasion)  [Plasmodium falciparum]                    25   8.0  
AAW78146  TRAP  (Invasion)  [Plasmodium falciparum]                    25   8.1  
AAW78148  TRAP  (Invasion)  [Plasmodium falciparum]                    25   8.2  
AAW78159  TRAP  (Invasion)  [Plasmodium falciparum]                    25   8.2  
AAW78156  TRAP  (Invasion)  [Plasmodium falciparum]                    25   8.2  
AAW78161  TRAP  (Invasion)  [Plasmodium falciparum]                    25   8.3  
AAW78147  TRAP  (Invasion)  [Plasmodium falciparum]                    25   8.3  
AAW78165  TRAP  (Invasion)  [Plasmodium falciparum]                    25   8.3  
AAW78158  TRAP  (Invasion)  [Plasmodium falciparum]                    25   8.3  
AAW78168  TRAP  (Invasion)  [Plasmodium falciparum]                    25   8.4  
AAW78174  TRAP  (Invasion)  [Plasmodium falciparum]                    25   8.6  
AAW78141  TRAP  (Invasion)  [Plasmodium falciparum]                    25   8.9  

>EAY09880.1 on AAW78133  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 27.3 bits (59), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 8/59 (13%)

Query: 122 NLSPTSNDRPIPLKPYTPKKKQIVRKYNLDLFRSDSDDSTKDSNGKKPVGESRYLAAHP 180
           NL    +DR IP  P +PK         LD  R  SD  ++D+NG + V  S     HP
Sbjct: 403 NLPNDKSDRYIPYSPLSPKV--------LDNERKQSDPQSQDNNGNRHVPNSEDRETHP 453



>EAY09880.1 on AAA29773  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 568

 Score = 26.9 bits (58), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 8/59 (13%)

Query: 122 NLSPTSNDRPIPLKPYTPKKKQIVRKYNLDLFRSDSDDSTKDSNGKKPVGESRYLAAHP 180
           NL    +DR IP  P  PK         LD  R  SD  ++D+NG + V  S     HP
Sbjct: 412 NLPNDKSDRYIPYSPLPPKV--------LDNERKQSDPQSQDNNGNRHVPNSEDRETHP 462



>EAY09880.1 on AAQ11892  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 559

 Score = 26.6 bits (57), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 8/59 (13%)

Query: 122 NLSPTSNDRPIPLKPYTPKKKQIVRKYNLDLFRSDSDDSTKDSNGKKPVGESRYLAAHP 180
           NL    +DR IP  P  PK         LD  R  SD  ++D+NG + V  S     HP
Sbjct: 403 NLPNDKSDRYIPYSPLPPKV--------LDNERKQSDPQSQDNNGNRHVPNSEDRETHP 453



>EAY09880.1 on AAW78172  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 545

 Score = 26.6 bits (57), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 8/59 (13%)

Query: 122 NLSPTSNDRPIPLKPYTPKKKQIVRKYNLDLFRSDSDDSTKDSNGKKPVGESRYLAAHP 180
           NL    +DR IP  P  PK         LD  R  SD  ++D+NG + V  S     HP
Sbjct: 409 NLPNDKSDRYIPYSPLPPKV--------LDNERKQSDPQSQDNNGNRHVPNSEDRETHP 459



>EAY09880.1 on AAW78131  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 557

 Score = 26.6 bits (57), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 8/59 (13%)

Query: 122 NLSPTSNDRPIPLKPYTPKKKQIVRKYNLDLFRSDSDDSTKDSNGKKPVGESRYLAAHP 180
           NL    +DR IP  P  PK         LD  R  SD  ++D+NG + V  S     HP
Sbjct: 421 NLPNDKSDRYIPYSPLPPKV--------LDNERKQSDPQSQDNNGNRHVPNSEDRETHP 471



>EAY09880.1 on AAW78171  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 551

 Score = 26.6 bits (57), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 8/59 (13%)

Query: 122 NLSPTSNDRPIPLKPYTPKKKQIVRKYNLDLFRSDSDDSTKDSNGKKPVGESRYLAAHP 180
           NL    +DR IP  P  PK         LD  R  SD  ++D+NG + V  S     HP
Sbjct: 415 NLPNDKSDRYIPYSPLPPKV--------LDNERKQSDPQSQDNNGNRHVPNSEDRETHP 465



>EAY09880.1 on XP_818403   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 957

 Score = 26.6 bits (57), Expect = 2.1,   Method: Composition-based stats.
 Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 2/32 (6%)

Query: 6   YILGKSSSYKEEEEYISPTLYESSSHKSLHSL 37
           Y  GKS   KEEE++I+  LYE    K  HSL
Sbjct: 444 YKSGKSGDNKEEEKFIA--LYEKDDGKQSHSL 473



>EAY09880.1 on XP_822017   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 990

 Score = 26.2 bits (56), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 4/57 (7%)

Query: 93  SGSGSKSPRILSISAIESYKKVMNDL----IEPNLSPTSNDRPIPLKPYTPKKKQIV 145
           SG+GS+    +++  +  Y + ++      I+PN +PT     +P KP T     +V
Sbjct: 784 SGAGSQDDVSVTVRNVLLYNRPLSSAEIGSIKPNKAPTPPLEKVPTKPLTVSSASVV 840



>EAY09880.1 on XP_001350413  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2860

 Score = 25.4 bits (54), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 16/53 (30%), Positives = 25/53 (47%)

Query: 180  PDKSDPFYNTDRTIDDVTTIIEEAIPLQNKSLYADDTIEEGHCSPTPLQIGNN 232
            P   +P Y  D+T  D+    E+ I     S+  +  I +G C+PT  +I  N
Sbjct: 1632 PKLPEPKYCVDKTAYDIRKDAEKNIKDIYSSIKGNGEIYKGKCNPTETKIDEN 1684



>EAY09880.1 on AAA29776  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 559

 Score = 25.0 bits (53), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 10/60 (16%)

Query: 122 NLSPTSNDRPIPLKPYTPKKKQIVRKYNLDLFRSDSDDSTKDSNGKK--PVGESRYLAAH 179
           NL    +DR IP  P  PK         LD  R  SD  ++D+NG +  P  E R    H
Sbjct: 403 NLPNDKSDRSIPYSPLPPKV--------LDNERKQSDPQSQDNNGNRHVPNSEDRETRPH 454



>EAY09880.1 on AAQ11894  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 559

 Score = 25.0 bits (53), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 10/60 (16%)

Query: 122 NLSPTSNDRPIPLKPYTPKKKQIVRKYNLDLFRSDSDDSTKDSNGKK--PVGESRYLAAH 179
           NL    +DR IP  P  PK         LD  R  SD  ++D+NG +  P  E R    H
Sbjct: 403 NLPNDKSDRSIPYSPLPPKV--------LDNERKQSDPQSQDNNGNRHVPNSEDRETRPH 454



>EAY09880.1 on AAA29774  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 559

 Score = 25.0 bits (53), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 10/60 (16%)

Query: 122 NLSPTSNDRPIPLKPYTPKKKQIVRKYNLDLFRSDSDDSTKDSNGKK--PVGESRYLAAH 179
           NL    +DR IP  P  PK         LD  R  SD  ++D+NG +  P  E R    H
Sbjct: 403 NLPNDKSDRSIPYSPLPPKV--------LDNERKQSDPQSQDNNGNRHVPNSEDRETRPH 454



>EAY09880.1 on AAQ11895  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 559

 Score = 24.6 bits (52), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 10/60 (16%)

Query: 122 NLSPTSNDRPIPLKPYTPKKKQIVRKYNLDLFRSDSDDSTKDSNGKK--PVGESRYLAAH 179
           NL    +DR IP  P  PK         LD  R  SD  ++D+NG +  P  E R    H
Sbjct: 403 NLPNDKSDRSIPYSPLPPKV--------LDNERKQSDPQSQDNNGNRHVPNSEDRETRPH 454



>EAY09880.1 on XP_821683   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 879

 Score = 24.6 bits (52), Expect = 7.2,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 39/85 (45%), Gaps = 3/85 (3%)

Query: 48  SISLSNDYEESQQEPLNSKEHINKKLIDYQKPKNSTSSKSSSSKSSGSGSKSPRI---LS 104
           ++SLSN   +   E    KE+I    +       + S+ +++  S+G G   P +   +S
Sbjct: 750 AVSLSNSARQLPSEQETLKENIGADGVSGAASVTTPSADANTPASNGEGKVEPAVKKEMS 809

Query: 105 ISAIESYKKVMNDLIEPNLSPTSND 129
           +S+ E  + V    ++  + P + +
Sbjct: 810 VSSGEDAETVGGTDVQEGIHPQAGE 834



>EAY09880.1 on AAW78167  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 575

 Score = 24.6 bits (52), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 10/60 (16%)

Query: 122 NLSPTSNDRPIPLKPYTPKKKQIVRKYNLDLFRSDSDDSTKDSNGKK--PVGESRYLAAH 179
           NL    +DR IP  P  PK         LD  R  SD  ++D+NG +  P  E R    H
Sbjct: 439 NLPNDKSDRNIPYSPLPPKV--------LDNERKQSDPQSQDNNGNRHVPNSEDRETRPH 490



>EAY09880.1 on AAW78146  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 24.6 bits (52), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 10/60 (16%)

Query: 122 NLSPTSNDRPIPLKPYTPKKKQIVRKYNLDLFRSDSDDSTKDSNGKK--PVGESRYLAAH 179
           NL    +DR IP  P  PK         LD  R  SD  ++D+NG +  P  E R    H
Sbjct: 403 NLPNDKSDRNIPYSPLPPKV--------LDNERKQSDPQSQDNNGNRHVPNSEDRETRPH 454



>EAY09880.1 on AAW78148  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 24.6 bits (52), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 10/60 (16%)

Query: 122 NLSPTSNDRPIPLKPYTPKKKQIVRKYNLDLFRSDSDDSTKDSNGKK--PVGESRYLAAH 179
           NL    +DR IP  P  PK         LD  R  SD  ++D+NG +  P  E R    H
Sbjct: 403 NLPNDKSDRNIPYSPLPPKV--------LDNERKQSDPQSQDNNGNRHVPNSEDRETRPH 454



>EAY09880.1 on AAW78159  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 24.6 bits (52), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 10/60 (16%)

Query: 122 NLSPTSNDRPIPLKPYTPKKKQIVRKYNLDLFRSDSDDSTKDSNGKK--PVGESRYLAAH 179
           NL    +DR IP  P  PK         LD  R  SD  ++D+NG +  P  E R    H
Sbjct: 403 NLPNDKSDRNIPYSPLPPKV--------LDNERKQSDPQSQDNNGNRHVPNSEDRETRPH 454



>EAY09880.1 on AAW78156  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 581

 Score = 24.6 bits (52), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 10/60 (16%)

Query: 122 NLSPTSNDRPIPLKPYTPKKKQIVRKYNLDLFRSDSDDSTKDSNGKK--PVGESRYLAAH 179
           NL    +DR IP  P  PK         LD  R  SD  ++D+NG +  P  E R    H
Sbjct: 445 NLPNDKSDRNIPYSPLPPKV--------LDNERKQSDPQSQDNNGNRHVPNSEDRETRPH 496



>EAY09880.1 on AAW78161  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 554

 Score = 24.6 bits (52), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 10/60 (16%)

Query: 122 NLSPTSNDRPIPLKPYTPKKKQIVRKYNLDLFRSDSDDSTKDSNGKK--PVGESRYLAAH 179
           NL    +DR IP  P  PK         LD  R  SD  ++D+NG +  P  E R    H
Sbjct: 418 NLPNDKSDRNIPYSPLPPKV--------LDNERKQSDPQSQDNNGNRHVPNSEDRETRPH 469



>EAY09880.1 on AAW78147  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 24.6 bits (52), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 10/60 (16%)

Query: 122 NLSPTSNDRPIPLKPYTPKKKQIVRKYNLDLFRSDSDDSTKDSNGKK--PVGESRYLAAH 179
           NL    +DR IP  P  PK         LD  R  SD  ++D+NG +  P  E R    H
Sbjct: 403 NLPNDKSDRNIPYSPLPPKV--------LDNERKQSDPQSQDNNGNRHVPNSEDRETRPH 454



>EAY09880.1 on AAW78165  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 24.6 bits (52), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 10/60 (16%)

Query: 122 NLSPTSNDRPIPLKPYTPKKKQIVRKYNLDLFRSDSDDSTKDSNGKK--PVGESRYLAAH 179
           NL    +DR IP  P  PK         LD  R  SD  ++D+NG +  P  E R    H
Sbjct: 403 NLPNDKSDRNIPYSPLPPKV--------LDNERKQSDPQSQDNNGNRHVPNSEDRETRPH 454



>EAY09880.1 on AAW78158  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 542

 Score = 24.6 bits (52), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 10/60 (16%)

Query: 122 NLSPTSNDRPIPLKPYTPKKKQIVRKYNLDLFRSDSDDSTKDSNGKK--PVGESRYLAAH 179
           NL    +DR IP  P  PK         LD  R  SD  ++D+NG +  P  E R    H
Sbjct: 406 NLPNDKSDRNIPYSPLPPKV--------LDNERKQSDPQSQDNNGNRHVPNSEDRETRPH 457



>EAY09880.1 on AAW78168  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 24.6 bits (52), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 10/60 (16%)

Query: 122 NLSPTSNDRPIPLKPYTPKKKQIVRKYNLDLFRSDSDDSTKDSNGKK--PVGESRYLAAH 179
           NL    +DR IP  P  PK         LD  R  SD  ++D+NG +  P  E R    H
Sbjct: 403 NLPNDKSDRNIPYSPLPPKV--------LDNERKQSDPQSQDNNGNRHVPNSEDRETRPH 454



>EAY09880.1 on AAW78174  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 24.6 bits (52), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 10/60 (16%)

Query: 122 NLSPTSNDRPIPLKPYTPKKKQIVRKYNLDLFRSDSDDSTKDSNGKK--PVGESRYLAAH 179
           NL    +DR IP  P  PK         LD  R  SD  ++D+NG +  P  E R    H
Sbjct: 403 NLPNDKSDRNIPYSPLPPKV--------LDNERKQSDPQSQDNNGNRHVPNSEDRETRPH 454



>EAY09880.1 on AAW78141  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 545

 Score = 24.6 bits (52), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 10/60 (16%)

Query: 122 NLSPTSNDRPIPLKPYTPKKKQIVRKYNLDLFRSDSDDSTKDSNGKK--PVGESRYLAAH 179
           NL    +DR IP  P  PK         LD  R  SD  ++D+NG +  P  E R    H
Sbjct: 409 NLPNDKSDRNIPYSPLPPKV--------LDNERKQSDPQSQDNNGNRHVPNSEDRETRPH 460




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09881.1 Protein kinase,putative [Trichomonas
vaginalis G3]
         (192 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    35   0.001
XP_811688   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   0.81 

>EAY09881.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 35.4 bits (80), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 2/85 (2%)

Query: 1   MIDKYGR-LKISDFGLSSIYKDHPTSNLFKGTRLFMAPEIFFFKEYDPMAADVWAICVTL 59
           MID   + L++ D+GL+  Y      ++   TR +  PE+     Y   + D+W+I   L
Sbjct: 179 MIDHEKKILRLIDWGLAEFYHPEQEYSVRVATRYYKGPELLVDMRYYDYSLDIWSIGCML 238

Query: 60  FYIATRTYP-FYSNDPRVLFQKIEK 83
             I  +  P FY +D      KI K
Sbjct: 239 AGIIFKKEPFFYGHDNYDQLVKIAK 263



>EAY09881.1 on XP_811688   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 573

 Score = 26.9 bits (58), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%)

Query: 22  HPTSNLFKGTRLFMAPEIFFFKEYDPMAAD 51
           HPT+   KG ++F+   + FF E++ M  D
Sbjct: 194 HPTTTT-KGNKVFLLGGVEFFNEHESMIWD 222




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09882.1 hypothetical protein TVAG_373890 [Trichomonas
vaginalis G3]
         (686 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09893.1 CAMK family protein kinase [Trichomonas
vaginalis G3]
         (351 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    54   4e-09
XP_822014   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.4  

>EAY09893.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 53.9 bits (128), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/224 (23%), Positives = 98/224 (43%), Gaps = 26/224 (11%)

Query: 32  DEYLLLKQIGNGFSSKIYLSLNTKTGRYYAVKKFKSLGLRTCASPYEQFEREVRNLAKFH 91
           D Y ++++IG G  S+++  LNT       V K K +         ++ +RE++ L    
Sbjct: 53  DSYEIVRKIGRGKFSEVFEGLNT-------VTKDKCVIKILKPVKKKKIKREIKILQNLR 105

Query: 92  H-ENILSIHEAIYCQENGSAYIVLEWANCGSLDQFCVPEKILTLDQIATVFKQVIIGLIH 150
              NI+ + + +   ++ +  ++ E  N      F      LT+  I     Q++  + +
Sbjct: 106 GGPNIIKLLDIVKDPQSRTPSLIFEHVNNTD---FKTLYPTLTIQDIKYYIYQLLKAMNY 162

Query: 151 LHEHGFAHKDIKPANILL-FSDGTAKISDFGIG---HSFQSAECVLGTPAYQAPEVFADS 206
            H  G  H+DIKP N+++       ++ D+G+    H  Q     + T  Y+ PE+  D 
Sbjct: 163 CHSQGIMHRDIKPHNVMIDHEKKILRLIDWGLAEFYHPEQEYSVRVATRYYKGPELLVDM 222

Query: 207 DYSDDDSYDVPIDPVKEYVWSLGVSIYQACFGQLP-FCGANEYE 249
            Y     YD  +D     +WS+G  +    F + P F G + Y+
Sbjct: 223 RY-----YDYSLD-----IWSIGCMLAGIIFKKEPFFYGHDNYD 256



>EAY09893.1 on XP_822014   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 950

 Score = 26.6 bits (57), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 173 TAKISDFGIGHSFQSAECVLGTPAYQAPEVFADS 206
           T   SDF    +  S + +LGT + QAPEV   S
Sbjct: 851 TTPSSDFAQEAATGSGDTMLGTGSTQAPEVSVSS 884




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09898.1 hypothetical protein TVAG_374050 [Trichomonas
vaginalis G3]
         (947 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001352242  PfEMP1  (Establishment)  [Plasmodium falciparum]         31   0.52 
XP_001351319  PfEMP1  (Establishment)  [Plasmodium falciparum]         30   0.58 
XP_818221   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.80 
XP_815193   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   1.2  
XP_807593   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   2.6  
XP_821395   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   2.9  
AAX07981  alpha-11 giardin  (Others)  [Giardia duodenalis]             28   3.1  
XP_815197   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   3.3  
XP_966160  PfEMP1  (Establishment)  [Plasmodium falciparum]            27   5.8  
XP_001349031  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   7.4  
XP_966305  PfEMP1  (Establishment)  [Plasmodium falciparum]            27   8.7  

>EAY09898.1 on XP_001352242  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2264

 Score = 30.8 bits (68), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)

Query: 382  FNNDSSSNSYNDSDLYQGKSQMDSSRDEISSSTSIESDIPQITCSKIDAASTV 434
            +N D S+NS N+ DLY GK+ + S ++ + S     SD   +T  K D+ S +
Sbjct: 2020 YNYDMSTNSGNN-DLYNGKNNLYSGQNNVYSGIDPTSDNRGLTSGKHDSYSGI 2071



>EAY09898.1 on XP_001351319  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2646

 Score = 30.4 bits (67), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)

Query: 382  FNNDSSSNSYNDSDLYQGKSQMDSSRDEISSSTSIESDIPQITCSKIDAASTV 434
            +N D S+NS N+ DLY GK+ + S ++ + S     SD   +T  K D+ S +
Sbjct: 2408 YNYDMSTNSGNN-DLYNGKNNLYSGQNNVYSGIDPTSDNRGLTSGKHDSYSGI 2459



>EAY09898.1 on XP_818221   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 748

 Score = 30.0 bits (66), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 33/154 (21%), Positives = 68/154 (44%), Gaps = 22/154 (14%)

Query: 546 EFQSP---SKGLMRISELNSSSKDSVKQFQAIQDKISTIEMI------NDSDPENKTLPI 596
           EF S    S G + + +   + +DS      + D++STI  +       D+     T+P 
Sbjct: 431 EFASALMYSDGRLHLLQQRDNGEDSALSLSRLTDEVSTINSVLKSWAQKDAFFSKLTIPT 490

Query: 597 SDILFQSKSSIVNNNTSIDIQNEINKMLNDD-------QNDSPSSNMSEVVNNQQDSIQE 649
           + ++    +++   +T ID    +N  + +        Q   P S +   VN + D+++ 
Sbjct: 491 AGLVAVLSNALSGGDTWIDEYLCLNATVTNAKKVRYGFQLTEPDSGVIWPVNTRGDNVRH 550

Query: 650 ITNLLILDKN-NIISEISEEES-TEDTPFGTEMI 681
           ++    L  N  +++ ++ EE+ T D P  T M+
Sbjct: 551 VS----LSHNFTLVASVTIEEAPTADAPLLTAML 580



>EAY09898.1 on XP_815193   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 702

 Score = 29.3 bits (64), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 69/158 (43%), Gaps = 23/158 (14%)

Query: 542 DQNLEFQSP---SKGLMRISELNSSSKDSVKQFQAIQDKISTIEMI------NDSDPENK 592
           D   EF S    S G + + +     + SV     + +++ TI+ +       D+   N 
Sbjct: 381 DVKWEFASALLYSDGSLHLLQRRGDYEGSVMSLSRLTEELGTIKSVLSTWAKKDAFFSNL 440

Query: 593 TLPISDILFQSKSSIVNNNTSIDIQNEINKMLNDD-------QNDSPSSNMSEVVNNQQD 645
           T+P +  L    S   +N+T ID    +N  +          Q   PSS +S  VN + D
Sbjct: 441 TIPTAG-LVAVLSDTASNDTWIDEYLCLNATVTKGRKAKYGFQLTEPSSRVSWSVNTRGD 499

Query: 646 SIQEITNLLILDKN-NIISEISEEES-TEDTPFGTEMI 681
           SI+ ++    L  N  +++ ++ EE+ + +TP  T  +
Sbjct: 500 SIRHVS----LSHNFTLVALVTIEEAPSGNTPLLTATL 533



>EAY09898.1 on XP_807593   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 715

 Score = 28.1 bits (61), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 17/64 (26%), Positives = 32/64 (50%)

Query: 210 KILEQEEHKKAQEDANKQYNDEVQKLVQKQAEEKAEILKRRDYKRKLILSELEQQKREIK 269
           KI   E+  K  + +  + +    + V  + E K  I  R DY+R+L+ +  + +K  ++
Sbjct: 231 KIFYSEDDGKTWKFSEGRSDFGCSEPVVLEWENKFIINNRVDYRRRLVYNSGDMEKPWVE 290

Query: 270 AHGT 273
           A GT
Sbjct: 291 AVGT 294



>EAY09898.1 on XP_821395   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 768

 Score = 28.1 bits (61), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 3/52 (5%)

Query: 724 IKDPVVLRSNNQVLPIIEAKSQQSDPNIIELSKKLESFIKTLDNKEQNPEIV 775
           +  P +L+  + V  ++EA+ ++SD NI      + S + T DN +   E++
Sbjct: 92  LGAPGLLKVGSDVFAVVEAQCKKSDANIF---TGIASQLLTKDNADTPVEVL 140



>EAY09898.1 on AAX07981  alpha-11 giardin  (Others)  [Giardia duodenalis]
          Length = 255

 Score = 27.7 bits (60), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 14/47 (29%), Positives = 27/47 (57%)

Query: 117 EPKQKSYVAEMIKEVSDEYEKKLHKFDHETKQRIQKIDEKHKEEQEN 163
           EP  ++ V  +I   +DEY++  H+F+  T + +Q+  E    ++EN
Sbjct: 169 EPDHEAVVRLIITSTADEYKEINHRFEVLTGKSVQEAIETRYADKEN 215



>EAY09898.1 on XP_815197   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 679

 Score = 27.7 bits (60), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 20/146 (13%)

Query: 551 SKGLMRISELNSSSKDSVKQFQAIQDKISTIEMI------NDSDPENKTLPISDILFQSK 604
           S G + + +     + SV     + +++ TI+ +       D+   N T+P +  L    
Sbjct: 446 SDGSLHLLQRRGDYEGSVMSLSRLTEELGTIKSVLSTWAKKDAFFSNLTIPTAG-LVAVL 504

Query: 605 SSIVNNNTSIDIQNEINKMLNDD-------QNDSPSSNMSEVVNNQQDSIQEITNLLILD 657
           S   +N T ID    +N  +          Q   PSS +S  VN + DSI+ ++    L 
Sbjct: 505 SDTASNGTWIDEYLCLNATVTKGRKAKYGFQLTEPSSRVSWSVNTRGDSIRHVS----LS 560

Query: 658 KN-NIISEISEEES-TEDTPFGTEMI 681
            N  +++ ++ EE+ + +TP  T  +
Sbjct: 561 HNFTLVALVTIEEAPSGNTPLLTATL 586



>EAY09898.1 on XP_966160  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2394

 Score = 27.3 bits (59), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 61/147 (41%), Gaps = 30/147 (20%)

Query: 589  PENKTLPISDILFQSKSSIVNNNTSIDIQNEINKMLNDDQNDSPSSNMSEVVNNQQDSIQ 648
            P+ KTL I  +L  SK    N  + I      NK  +++ N      +S +  N Q    
Sbjct: 2134 PKYKTL-IDVVLEPSKRDTFNTQSDIPSDTSTNKFTDNEWNQLKQDFISNISQNSQ---- 2188

Query: 649  EITNLLILDKNNIISEISE---------EESTEDTPFGTEMILSPQKERIVLNTEE---N 696
                 + L KNNI   I           ++S ++ PF T +      +R + N EE   N
Sbjct: 2189 -----MDLPKNNISGNIQMDTHPHVNILDDSMQEKPFITSI-----HDRDLHNGEEVTYN 2238

Query: 697  LNFEREYSSKSENSETIHSNIPFSHDQ 723
            +N +     K+ N  T H NIP  +DQ
Sbjct: 2239 INLD---DHKNMNFSTNHDNIPPKNDQ 2262



>EAY09898.1 on XP_001349031  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2275

 Score = 26.9 bits (58), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 17/49 (34%), Positives = 31/49 (63%), Gaps = 1/49 (2%)

Query: 202 AKEIHKEIKILEQEEHKKAQEDANKQYNDEVQKLVQKQAEEKAEILKRR 250
           AKE+ +  KI+E EE+++A   AN + N  + KL+  + +E  + L++R
Sbjct: 768 AKELKQLSKIIESEENQEAGAGANGKKN-IMDKLIDYEEKEAQKCLEKR 815



>EAY09898.1 on XP_966305  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3954

 Score = 26.6 bits (57), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)

Query: 382  FNNDSSSNSYNDSDLYQGKSQMDSSRDEISSSTSIESD 419
            +N D S+NS N+ DLY GK+ + S ++ + S     SD
Sbjct: 3654 YNYDMSTNSGNN-DLYNGKNNLYSGQNNVYSGIDPTSD 3690




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09899.1 protein kinase, putative [Trichomonas
vaginalis G3]
         (224 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    51   1e-08

>EAY09899.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 50.8 bits (120), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 6/100 (6%)

Query: 18  LDPNLAIQ----YAREILIGLSLCHANGISHGDIKTSNILIDAYGRI-KICDFGMSDFSD 72
           L P L IQ    Y  ++L  ++ CH+ GI H DIK  N++ID   +I ++ D+G+++F  
Sbjct: 140 LYPTLTIQDIKYYIYQLLKAMNYCHSQGIMHRDIKPHNVMIDHEKKILRLIDWGLAEFYH 199

Query: 73  DPEGLSQHFRGSFPFMAIEIIDKKAYDRFKADIYSFGVTL 112
             +  S      +      ++D + YD +  DI+S G  L
Sbjct: 200 PEQEYSVRVATRYYKGPELLVDMRYYD-YSLDIWSIGCML 238




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09901.1 hypothetical protein TVAG_374080 [Trichomonas
vaginalis G3]
         (176 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001347690  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   4.2  

>EAY09901.1 on XP_001347690  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2215

 Score = 24.6 bits (52), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 13/36 (36%), Positives = 16/36 (44%)

Query: 46   IETIGISIKSVVLHDREFIFLDTNGLFAHQDEWKDC 81
            ++ +G   K V   D E IF DT   F   D  K C
Sbjct: 1362 LQKLGSCSKKVSEKDNEKIFEDTEQTFKDADNCKPC 1397




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09905.1 hypothetical protein TVAG_374120 [Trichomonas
vaginalis G3]
         (570 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09911.1 hypothetical protein TVAG_374180 [Trichomonas
vaginalis G3]
         (726 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_829792  VSG  (Establishment)  [Trypanosoma brucei]                  30   0.57 
XP_804289   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   0.85 
AAL38221  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   29   1.2  
AAL38222  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   29   1.2  
AAL38218  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   29   1.2  
AAL38220  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   29   1.3  
AAL38219  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   27   4.3  

>EAY09911.1 on XP_829792  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 514

 Score = 30.0 bits (66), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 9/106 (8%)

Query: 193 IMLCGLTPEELQYPTESQLNTYSHNPR-IRKQVRDKLIEN-------KDALIAEVTAKRE 244
           + +CG+   +     ES  ++ + NP    +QV   L+           A  AEV AK  
Sbjct: 231 LCVCGVDGTDNNKLCESSQSSTAFNPSSTPEQVLKDLLSKCPQPSPKTPATAAEVQAKAT 290

Query: 245 ELVKADQEKG-NTDSELKSVTGSVSKEDQRQVEAIQKRQKREVEQL 289
            L+ A Q+KG +T     + TG   K +Q      +   K+E+E L
Sbjct: 291 ALINAFQQKGKDTYYGFYTGTGCSGKSNQGICVMYKAGTKQELETL 336



>EAY09911.1 on XP_804289   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1048

 Score = 29.3 bits (64), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 12/58 (20%)

Query: 539 MIKIMEAQQG----YSQNQVKIKEKMEQIKKQEEKRSQEILQKLKDAEQRTESAREKA 592
           +I + E ++G    YS   V++ EK+E+IK        E+++K KD +   ES R  +
Sbjct: 430 LISLYENKKGDDGSYSLVAVRLTEKLERIK--------EVVKKWKDLDSAFESCRSGS 479



>EAY09911.1 on AAL38221  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2965

 Score = 28.9 bits (63), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 20/111 (18%)

Query: 547  QGYSQNQVKIKEKME-----------QIKKQEEKRSQEILQKLKDAEQRTESAREKAE-- 593
            Q Y  N ++  EK+E           QI  QE K+ QE ++K+KD   +T    EK +  
Sbjct: 1663 QLYFHNTLRGNEKIEYLKNLKNSTNQQITLQELKQVQENVEKVKDIYNQTIKYEEKIKTN 1722

Query: 594  ---LQRQEKAIAIRLHNEIRAQIAQRNERRKEAEKQ---ALKDK-FEERIR 637
               +   E  I   LHN    QI   +   K+  KQ    + DK FEE I+
Sbjct: 1723 YHIITDYENKINDILHNSFIKQINMESSNNKKQTKQIIDIINDKTFEEHIK 1773



>EAY09911.1 on AAL38222  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2976

 Score = 28.9 bits (63), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 20/111 (18%)

Query: 547  QGYSQNQVKIKEKME-----------QIKKQEEKRSQEILQKLKDAEQRTESAREKAE-- 593
            Q Y  N ++  EK+E           QI  QE K+ QE ++K+KD   +T    EK +  
Sbjct: 1670 QLYFHNTLRGNEKIEYLKNLKNSTNQQITLQELKQVQENVEKVKDIYNQTIKYEEKIKKN 1729

Query: 594  ---LQRQEKAIAIRLHNEIRAQIAQRNERRKEAEKQ---ALKDK-FEERIR 637
               +   E  I   LHN    QI   +   K+  KQ    + DK FEE I+
Sbjct: 1730 YHIITDYENKINDILHNSFIKQINMESSNNKKQTKQIIDIINDKTFEEHIK 1780



>EAY09911.1 on AAL38218  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2977

 Score = 28.9 bits (63), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 20/111 (18%)

Query: 547  QGYSQNQVKIKEKME-----------QIKKQEEKRSQEILQKLKDAEQRTESAREKAE-- 593
            Q Y  N ++  EK+E           QI  QE K+ QE ++K+KD   +T    EK +  
Sbjct: 1667 QLYFHNTLRGNEKIEYLKNLKNSTNQQITLQELKQVQENVEKVKDIYNQTIKYEEKIKKN 1726

Query: 594  ---LQRQEKAIAIRLHNEIRAQIAQRNERRKEAEKQ---ALKDK-FEERIR 637
               +   E  I   LHN    QI   +   K+  KQ    + DK FEE I+
Sbjct: 1727 YHIITDYENKINDILHNSFIKQINMESSNNKKQTKQIIDIINDKTFEEHIK 1777



>EAY09911.1 on AAL38220  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2957

 Score = 28.9 bits (63), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 20/111 (18%)

Query: 547  QGYSQNQVKIKEKME-----------QIKKQEEKRSQEILQKLKDAEQRTESAREKAE-- 593
            Q Y  N ++  EK+E           QI  QE K+ QE ++K+KD   +T    EK +  
Sbjct: 1657 QLYFHNTLRGNEKIEYLKNLKNSTNQQITLQELKQVQENVEKVKDIYNQTIKYEEKIKKN 1716

Query: 594  ---LQRQEKAIAIRLHNEIRAQIAQRNERRKEAEKQ---ALKDK-FEERIR 637
               +   E  I   LHN    QI   +   K+  KQ    + DK FEE I+
Sbjct: 1717 YHIITDYENKINDILHNSFIKQINMESSNNKKQTKQIIDIINDKTFEEHIK 1767



>EAY09911.1 on AAL38219  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2969

 Score = 27.3 bits (59), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 48/111 (43%), Gaps = 20/111 (18%)

Query: 547  QGYSQNQVKIKEKME-----------QIKKQEEKRSQEILQKLKDAEQRT-----ESARE 590
            Q Y  N ++  EK+E           QI  QE K+ QE ++K+KD   +T     E  + 
Sbjct: 1659 QLYFHNTLRGNEKIEYLKNLKNSTNQQITLQELKQVQENVEKVKDIYNQTIKYEEEIKKN 1718

Query: 591  KAELQRQEKAIAIRLHNEIRAQIAQRNERRKEAEKQ---ALKDK-FEERIR 637
               +   E  I   LHN    QI   +   K+  KQ    + DK FEE I+
Sbjct: 1719 YHIITDYENKINDILHNSFIKQINMESSNNKKQTKQIIDIINDKTFEEHIK 1769




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09913.1 hypothetical protein TVAG_374200 [Trichomonas
vaginalis G3]
         (141 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09917.1 hypothetical protein TVAG_481910 [Trichomonas
vaginalis G3]
         (171 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_845137  VSG  (Establishment)  [Trypanosoma brucei]                  24   7.3  

>EAY09917.1 on XP_845137  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 485

 Score = 23.9 bits (50), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 4/50 (8%)

Query: 50  ESQILIDNAIALQSSANRFNESICNFNAKRNN----KFFEQLVETNNALE 95
           E+ +++      +  AN+   ++ N   K  +    KF E+L ETN AL+
Sbjct: 312 EAALILTGQSTKEQDANKRKAAVANVLGKGKDTVAKKFLEKLTETNVALK 361




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09919.1 haloacid dehalogenase-like hydrolase family
protein [Trichomonas vaginalis G3]
         (227 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09920.1 hypothetical protein TVAG_481940 [Trichomonas
vaginalis G3]
         (183 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_843847  VSG  (Establishment)  [Trypanosoma brucei]                  31   0.026
XP_001350798  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   1.2  
XP_818196   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   1.5  
XP_001609619  variant erythrocyte surface antigen-1, beta subuni...    25   4.5  
XP_001682426  UDP-galactopyranose mutase  (Others)  [Leishmania ...    23   7.3  

>EAY09920.1 on XP_843847  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 407

 Score = 31.2 bits (69), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 20/68 (29%), Positives = 31/68 (45%)

Query: 107 EAPEDETRPAPKPQTSTSNYTPSAPSTTNTESVTQQPEPEPSNEGEWQIEESPAREEVLS 166
           E P  E RP   P T+T   TP AP+T+     T  P+  P  E        P+ + +  
Sbjct: 330 EDPSPEQRPKQSPSTATDGNTPMAPNTSAATQSTTDPDLVPLGETRTNHSLQPSHQPLRP 389

Query: 167 RNNTESVS 174
           +N  +++S
Sbjct: 390 KNVAQAIS 397



>EAY09920.1 on XP_001350798  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2359

 Score = 26.6 bits (57), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 1/41 (2%)

Query: 2    NFYDIYTTLNINPDSQHSLETICEYCKCLNQLESLKQALWK 42
            NF D    L ++ D+++  ET+ E C+  +  E +K+  WK
Sbjct: 1578 NFTDTIDML-VSDDNKNKSETVLEACEGADIFEGIKENKWK 1617



>EAY09920.1 on XP_818196   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 841

 Score = 26.2 bits (56), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 7/86 (8%)

Query: 101 FHAKYHEAPEDETRPAPKPQT----STSNYTPSA---PSTTNTESVTQQPEPEPSNEGEW 153
           F     E  ED   P+ +P +       N  PSA   P     ++ + QP+ EP  +   
Sbjct: 720 FSGGNAEVEEDADSPSAEPASPFVARDQNAAPSAGELPDAPVGQTTSPQPQQEPETQKNT 779

Query: 154 QIEESPAREEVLSRNNTESVSRRAAS 179
            + ES   ++V +  +  SV + AAS
Sbjct: 780 MVRESATTQQVPANTSEGSVEKAAAS 805



>EAY09920.1 on XP_001609619  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 1086

 Score = 24.6 bits (52), Expect = 4.5,   Method: Composition-based stats.
 Identities = 9/17 (52%), Positives = 13/17 (76%)

Query: 127 TPSAPSTTNTESVTQQP 143
           TP+ P+TT++ SVT  P
Sbjct: 368 TPAKPATTSSASVTPSP 384



>EAY09920.1 on XP_001682426  UDP-galactopyranose mutase  (Others)  [Leishmania
           donovani]
          Length = 255

 Score = 23.5 bits (49), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 1/27 (3%)

Query: 53  FPFDEETGKIYDALWKAAQAENYSTIG 79
           FP    TG IY A+WK    E + T+G
Sbjct: 206 FPKSGGTGAIYKAVWKMIP-EAHKTLG 231




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09921.1 hypothetical protein TVAG_481950 [Trichomonas
vaginalis G3]
         (261 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001350415  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   1.4  
XP_001348153  MAEBL  (Adhesin)  [Plasmodium falciparum]                25   5.0  

>EAY09921.1 on XP_001350415  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3056

 Score = 26.9 bits (58), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 25/51 (49%)

Query: 72   TYQISRKSALKIKGYRHEFQLIFNGNQMYHAKIKPYQDSHVIGISEGSESH 122
            TY   +K+   I+G  ++ + I  GN + H +   Y DS +  I + S  +
Sbjct: 1662 TYLAHKKACCAIRGSFYDLEDIIKGNDLVHDEYTKYIDSKLNEIFDSSNKN 1712



>EAY09921.1 on XP_001348153  MAEBL  (Adhesin)  [Plasmodium falciparum]
          Length = 2054

 Score = 25.0 bits (53), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 11/77 (14%)

Query: 124 KSDHFEAVLLHANSFCDFSLRK-------ENQFGDELMTLTFRKDPKVKIHPRVLTVFFN 176
           K +HF   +L ANS   F+L +       +N    E  +L   KDPK + + RVL     
Sbjct: 417 KENHFSFTILTANS---FNLNQNIIYPELKNNSSKEGSSLIHFKDPK-QTNKRVLYENNK 472

Query: 177 KRPPSVPERLETVDPIA 193
           K   +V  ++ +V+P  
Sbjct: 473 KSKRNVRTKINSVNPFT 489




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09922.1 hypothetical protein TVAG_481960 [Trichomonas
vaginalis G3]
         (3024 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_804506   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   2.4  

>EAY09922.1 on XP_804506   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1012

 Score = 30.0 bits (66), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 39/169 (23%), Positives = 70/169 (41%), Gaps = 22/169 (13%)

Query: 2760 PKQKDIVLKLIATSDVIKTNISVNGDKSVNSLNFAPTMM---------FESRRTPIEINN 2810
            P++ D+    +  + V+     VN +K  NS   +P+++          E R +  E NN
Sbjct: 340  PRRFDL---FVPQTTVLLPRGGVNSEKKWNSFA-SPSLVSAGGVIAAFAEGRPSSKESNN 395

Query: 2811 QSK-----IAVRYMWKVINYSTMDGEKRCPFSVDPYTGIIPSNTVKSFDVVFSPTAVDDC 2865
             S          Y+    ++ST+  E +   +   +T +  ++  + FDVV  PT     
Sbjct: 396  ASSEPSSDAVAWYIDSAWDWSTLVAEVK-KSTWQAHTVLGKADGTERFDVVLRPTTTTKD 454

Query: 2866 SCDICVVFGDEAIETFEKMSHDDLQFINVTGLSRRPICHFDVKQSDYLN 2914
            +    +    +A    E  SH  L+   V G  R+P    D +QS ++N
Sbjct: 455  NKVFLLAGSSDASNVNESWSHGGLKLKLVVGDVRKPT---DSEQSGWIN 500




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09923.1 TKL family protein kinase [Trichomonas
vaginalis G3]
         (968 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    52   1e-07

>EAY09923.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/91 (26%), Positives = 50/91 (54%), Gaps = 3/91 (3%)

Query: 304 RGLEYVHANHMVHRDLKPPNILMDKNWRAV-ICDFGLARYIGPNM--TCELGTAQWMAPE 360
           + + Y H+  ++HRD+KP N+++D   + + + D+GLA +  P    +  + T  +  PE
Sbjct: 158 KAMNYCHSQGIMHRDIKPHNVMIDHEKKILRLIDWGLAEFYHPEQEYSVRVATRYYKGPE 217

Query: 361 LFSGDGSYDTCVDVYAYGILLWELFTQQMPY 391
           L      YD  +D+++ G +L  +  ++ P+
Sbjct: 218 LLVDMRYYDYSLDIWSIGCMLAGIIFKKEPF 248




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09924.1 hypothetical protein TVAG_481980 [Trichomonas
vaginalis G3]
         (158 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_650534  HgI  (Adhesin)  [Entamoeba histolytica]                     27   0.56 
XP_816303   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   5.3  

>EAY09924.1 on XP_650534  HgI  (Adhesin)  [Entamoeba histolytica]
          Length = 1207

 Score = 26.9 bits (58), Expect = 0.56,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 30/64 (46%)

Query: 31  LKSRFSLSRKSKYAIPLSELDDQQKSSTNQKHKNATQTKKLTLAQQYQLDSSIRLSSTNA 90
           + S F    +SKY   +    D  +  ++ K +N  + K     ++YQLD S   S T+ 
Sbjct: 68  IDSNFPTKDQSKYFTEMIFNQDYDRDKSDTKEENMCRKKMGYPIREYQLDWSRIPSDTSK 127

Query: 91  VPKI 94
           +P +
Sbjct: 128 LPVV 131



>EAY09924.1 on XP_816303   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 955

 Score = 23.9 bits (50), Expect = 5.3,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 26/50 (52%)

Query: 46  PLSELDDQQKSSTNQKHKNATQTKKLTLAQQYQLDSSIRLSSTNAVPKIM 95
           P+SE DD + ++++  +K+A    K  L   Y+    +  +S+  V  ++
Sbjct: 424 PVSEKDDDEVTASSLLYKSAESKDKDELIALYEKKKGVEETSSGMVSVLL 473




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09925.1 Ser/Thr protein phosphatase, putative
[Trichomonas vaginalis G3]
         (330 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAZ73239  ROP16  (Establishment)  [Toxoplasma gondii]                  26   3.7  
XP_820142   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   5.2  
XP_001349513  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   6.1  

>EAY09925.1 on AAZ73239  ROP16  (Establishment)  [Toxoplasma gondii]
          Length = 255

 Score = 25.8 bits (55), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 12/36 (33%), Positives = 20/36 (55%)

Query: 201 WSDPAKDVEDFAPSERGLTVKWGQKPAQQFMEANNL 236
           WS P + +    PS  G+ V   Q+P +Q+  A++L
Sbjct: 158 WSSPPQPLTQRKPSLSGVVVTEFQEPQEQYGAASSL 193



>EAY09925.1 on XP_820142   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 861

 Score = 25.4 bits (54), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 11/102 (10%)

Query: 227 AQQFMEA-NNLTKIIRAHQMAEEGIEYPFAP-------DYSVITVFSAPWYAGEFKNKGG 278
            + + EA   L+++  +++    G+   F         D   + + + P YAGE K KG 
Sbjct: 326 GESWTEALGTLSRVWGSNKKGVSGVRSGFITATVGNDGDKRNVMLVTLPVYAGEGKEKGK 385

Query: 279 F-LKIDKNNHIDPI--MIKHNDKAPPVTFAQYVPNKNEGKGK 317
             L +  N HI  I  +   +D A          N +E +GK
Sbjct: 386 LHLWLTDNTHIVDIGPVSGEDDAAASSLLYNSGENTDEREGK 427



>EAY09925.1 on XP_001349513  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2858

 Score = 25.4 bits (54), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 35/88 (39%), Gaps = 17/88 (19%)

Query: 234 NNLTKIIRAHQMAEEGI---------EYPFAPDYSVI---TVFSAPWYAGEFKNKGGFLK 281
           +NL KI    Q   E I         EY +A + + +      SAP+YA  FK K G   
Sbjct: 219 DNLEKIFNRFQKIYEDINNLPIDDIREYWWALNRNDVWEALTCSAPYYADYFKKKSG--- 275

Query: 282 IDKNNHIDPIMIKHNDKAPPVTFAQYVP 309
            +  N         N+ APP     YVP
Sbjct: 276 -NTYNFTTEGYCGRNEGAPPTNL-DYVP 301




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09928.1 RhoGAP domain containing protein [Trichomonas
vaginalis G3]
         (402 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAN87596  CSP  (Invasion)  [Plasmodium falciparum]                     27   2.3  
AAN87598  CSP  (Invasion)  [Plasmodium falciparum]                     27   2.5  
AAN87597  CSP  (Invasion)  [Plasmodium falciparum]                     26   4.0  
AAA29521  CSP  (Invasion)  [Plasmodium falciparum]                     25   9.6  
AAA29527  CSP  (Invasion)  [Plasmodium falciparum]                     25   9.7  
BAD73954  CSP  (Invasion)  [Plasmodium falciparum]                     25   9.9  

>EAY09928.1 on AAN87596  CSP  (Invasion)  [Plasmodium falciparum]
          Length = 360

 Score = 26.9 bits (58), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 10/24 (41%), Positives = 16/24 (66%)

Query: 51  SDRQIKELIEVIDNGRIQDWTPYS 74
           SD+ IKE +++I N    +W+P S
Sbjct: 275 SDKHIKEYLKIIQNSLSTEWSPCS 298



>EAY09928.1 on AAN87598  CSP  (Invasion)  [Plasmodium falciparum]
          Length = 412

 Score = 26.6 bits (57), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 10/24 (41%), Positives = 16/24 (66%)

Query: 51  SDRQIKELIEVIDNGRIQDWTPYS 74
           SD+ IKE +++I N    +W+P S
Sbjct: 327 SDKHIKEYLKIIQNSLSTEWSPCS 350



>EAY09928.1 on AAN87597  CSP  (Invasion)  [Plasmodium falciparum]
          Length = 360

 Score = 26.2 bits (56), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 10/24 (41%), Positives = 16/24 (66%)

Query: 51  SDRQIKELIEVIDNGRIQDWTPYS 74
           SD+ IKE +++I N    +W+P S
Sbjct: 275 SDKHIKEYLKIIPNSLSTEWSPCS 298



>EAY09928.1 on AAA29521  CSP  (Invasion)  [Plasmodium falciparum]
          Length = 397

 Score = 25.0 bits (53), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 10/24 (41%), Positives = 14/24 (58%)

Query: 51  SDRQIKELIEVIDNGRIQDWTPYS 74
           SD+ IKE +  I N    +W+P S
Sbjct: 312 SDKHIKEYLNKIQNSLSTEWSPCS 335



>EAY09928.1 on AAA29527  CSP  (Invasion)  [Plasmodium falciparum]
          Length = 405

 Score = 25.0 bits (53), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 10/24 (41%), Positives = 14/24 (58%)

Query: 51  SDRQIKELIEVIDNGRIQDWTPYS 74
           SD+ IKE +  I N    +W+P S
Sbjct: 320 SDKHIKEYLNKIQNSLSTEWSPCS 343



>EAY09928.1 on BAD73954  CSP  (Invasion)  [Plasmodium falciparum]
          Length = 389

 Score = 24.6 bits (52), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 10/24 (41%), Positives = 14/24 (58%)

Query: 51  SDRQIKELIEVIDNGRIQDWTPYS 74
           SD+ IKE +  I N    +W+P S
Sbjct: 304 SDKHIKEYLNKIQNSLSTEWSPCS 327




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09932.1 hypothetical protein TVAG_482060 [Trichomonas
vaginalis G3]
         (89 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_808165   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   6.6  

>EAY09932.1 on XP_808165   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 918

 Score = 22.3 bits (46), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 13/28 (46%), Positives = 14/28 (50%)

Query: 16  TEEQKKKDEEEEIRRKAEEEERKKKEAE 43
           +EE K  D E E  R AE E    K AE
Sbjct: 762 SEEPKSADSESEGPRPAESESEGPKPAE 789




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09934.1 hypothetical protein TVAG_482080 [Trichomonas
vaginalis G3]
         (299 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_819737   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.9  
XP_810140   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   8.7  

>EAY09934.1 on XP_819737   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1112

 Score = 26.9 bits (58), Expect = 1.9,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 29/59 (49%), Gaps = 8/59 (13%)

Query: 1   MTETPENKQELEKDPTNTFLTGVNIDVDAWREQTVEELTAWLNDIKSKKTEFGDPLVDF 59
           + E P + ++ E +P  T+  G+ +D + W        + +++  +   TE+ + L DF
Sbjct: 679 IPENPGDPEDFEWEPNKTYQVGLRMDFEEW--------SVFVDGREIHSTEYDEHLFDF 729



>EAY09934.1 on XP_810140   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 923

 Score = 24.6 bits (52), Expect = 8.7,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 23/59 (38%), Gaps = 1/59 (1%)

Query: 204 PENVTLLDAEEDNKESDETKEPSSERPSSTPKSPQEISSLSP-PVEAASAPKSPPHKSA 261
           P    + ++EE      E++EP      S    P E  S  P P E  +A  S    +A
Sbjct: 749 PSTPAVSESEEPKPAESESEEPKPAESESEEPKPVESESEEPKPAEPNAATSSAREGTA 807




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09946.1 hypothetical protein TVAG_482200 [Trichomonas
vaginalis G3]
         (87 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09947.1 hypothetical protein TVAG_482210 [Trichomonas
vaginalis G3]
         (392 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]                 31   0.15 
AAL38220  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   28   1.3  
XP_821154   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.0  
AAL38219  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   27   2.1  
AAL38222  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   27   2.1  
AAL38218  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   27   2.3  
AAL38221  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   27   3.4  
XP_001351435  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   7.7  
XP_818883   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   8.9  
XP_966307  PfEMP1  (Establishment)  [Plasmodium falciparum]            25   9.7  

>EAY09947.1 on XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]
          Length = 2112

 Score = 30.8 bits (68), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 15  ESPEPHKSPEP-SRTQPTRRPLDAPKPSNRQDPNQNSYPTKTIN 57
           E P+P ++PEP  +  P   P    KP+  ++PN    PT   N
Sbjct: 498 ELPKPEENPEPVEKPNPEENPNPVEKPTPEENPNPVEKPTPEEN 541



>EAY09947.1 on AAL38220  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2957

 Score = 27.7 bits (60), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 22/96 (22%), Positives = 44/96 (45%), Gaps = 17/96 (17%)

Query: 196  LELTDVALHSSSQN---------KSEQQKKL--SEADKILSPYAETETSDPKLAYRRDL- 243
            L++ +++L +  +N         K+++ KK+   E D +      ++ S+  +    DL 
Sbjct: 988  LKILNISLKACEKNNKSINTLNDKTQELKKIVTHEIDLLQKDILTSQISNKNVLLLNDLL 1047

Query: 244  -----YIADIHSQKKRYEESLPFYERAGDNFPQANP 274
                 YI DIH  KK+  +   +YE++ + F   N 
Sbjct: 1048 KEIEQYIIDIHKLKKKSNDLFTYYEQSKNYFYFKNK 1083



>EAY09947.1 on XP_821154   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 951

 Score = 27.3 bits (59), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 13/58 (22%), Positives = 27/58 (46%)

Query: 277 TKEMAEIYVRGAQAANQAQNTEKEIEFYKKAIAVYQELQMDAEAQKLQEKLPAEPAEG 334
           +K ++  Y+ G + +  +  +E+++      + +Y     D+E   L  KL    AEG
Sbjct: 692 SKAVSHFYIGGGERSGGSAGSEEDVSVTVTNVLLYNRPLNDSEITALNTKLSIPKAEG 749



>EAY09947.1 on AAL38219  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2969

 Score = 27.3 bits (59), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 21/96 (21%), Positives = 44/96 (45%), Gaps = 17/96 (17%)

Query: 196  LELTDVALHSSSQN---------KSEQQKKL--SEADKILSPYAETETSDPKLAYRRDL- 243
            L++ +++L +  +N         K+++ KK+   E D +      ++ S+  +    DL 
Sbjct: 996  LKILNISLKACEKNNKSINTLNDKTQELKKIVTHEIDLLQKDILTSQISNKNVLLLNDLL 1055

Query: 244  -----YIADIHSQKKRYEESLPFYERAGDNFPQANP 274
                 YI D+H  KK+  +   +YE++ + F   N 
Sbjct: 1056 KEIEQYIIDVHKLKKKSNDLFTYYEQSKNYFYFKNK 1091



>EAY09947.1 on AAL38222  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2976

 Score = 27.3 bits (59), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 21/96 (21%), Positives = 44/96 (45%), Gaps = 17/96 (17%)

Query: 196  LELTDVALHSSSQN---------KSEQQKKL--SEADKILSPYAETETSDPKLAYRRDL- 243
            L++ +++L +  +N         K+++ KK+   E D +      ++ S+  +    DL 
Sbjct: 1001 LKILNISLKACEKNNKSINTLNDKTQELKKIVTHEIDLLQKDILTSQISNKNVLLLNDLL 1060

Query: 244  -----YIADIHSQKKRYEESLPFYERAGDNFPQANP 274
                 YI D+H  KK+  +   +YE++ + F   N 
Sbjct: 1061 KEIEQYIIDVHKLKKKSNDLFTYYEQSKNYFYFKNK 1096



>EAY09947.1 on AAL38218  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2977

 Score = 26.9 bits (58), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 21/96 (21%), Positives = 44/96 (45%), Gaps = 17/96 (17%)

Query: 196  LELTDVALHSSSQN---------KSEQQKKL--SEADKILSPYAETETSDPKLAYRRDL- 243
            L++ +++L +  +N         K+++ KK+   E D +      ++ S+  +    DL 
Sbjct: 992  LKILNISLKACEKNNKSINTLNDKTQELKKIVTHEIDLLQKDILTSQISNKNVLLLNDLL 1051

Query: 244  -----YIADIHSQKKRYEESLPFYERAGDNFPQANP 274
                 YI D+H  KK+  +   +YE++ + F   N 
Sbjct: 1052 KEIEQYIIDVHKLKKKSNDLFTYYEQSKNYFYFKNK 1087



>EAY09947.1 on AAL38221  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2965

 Score = 26.6 bits (57), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 8/73 (10%)

Query: 210  KSEQQKKL--SEADKILSPYAETETSDPKLAYRRDL------YIADIHSQKKRYEESLPF 261
            K+++ KK+   E D +      ++ S+  +    DL      YI D+H  KK+  +   +
Sbjct: 1017 KTQELKKIVTHEIDLLQKDILTSQISNKNVLLLNDLLKEIEQYIIDVHKLKKKSNDLFTY 1076

Query: 262  YERAGDNFPQANP 274
            YE++ + F   N 
Sbjct: 1077 YEQSKNYFYFKNK 1089



>EAY09947.1 on XP_001351435  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2209

 Score = 25.4 bits (54), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 13/33 (39%), Positives = 15/33 (45%)

Query: 11  KQGTESPEPHKSPEPSRTQPTRRPLDAPKPSNR 43
           K  TE  E HK P+P R    R       PS+R
Sbjct: 811 KIATECIEKHKCPDPPREGAGRSDTSRDSPSSR 843



>EAY09947.1 on XP_818883   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 980

 Score = 25.0 bits (53), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 1/44 (2%)

Query: 187 SEEDQFKLNLELTDVALHSSSQNKSEQQKKLSEADKILSPYAET 230
           SE D   +N+ +++V L+S + NK+ Q K L + + + +P AE 
Sbjct: 693 SERDSDNINVTVSNVLLYSRAFNKA-QLKPLMKTNTVGTPDAEV 735



>EAY09947.1 on XP_966307  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2238

 Score = 25.0 bits (53), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 24/99 (24%), Positives = 47/99 (47%), Gaps = 7/99 (7%)

Query: 185 KLSEEDQFKLNLELTDVALHSSSQNKS-----EQQKKLSEADKILSPYAETETSDPKLAY 239
           K++  D+   +  LTDV L +  + +S      Q +  +E  +I +  A +      +  
Sbjct: 135 KINRYDKVNNHTLLTDVCLAAKFEAESLKTYRGQHQLTNEGSQICTVLARSFADIGDIVR 194

Query: 240 RRDLYIADIHSQKKRYEESL-PFYERAGDNFPQANPEKT 277
            +DLY+ + + +KK+ EE+L   ++   D     N +KT
Sbjct: 195 GKDLYLGN-NKEKKQLEENLKKIFKEIYDKLDGKNGKKT 232




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09949.1 TPR repeat protein, putative [Trichomonas
vaginalis G3]
         (653 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_812550   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   1.4  
XP_001349219  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   2.4  
XP_805786   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   4.6  
XP_805183   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   9.8  

>EAY09949.1 on XP_812550   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 795

 Score = 28.5 bits (62), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 1/81 (1%)

Query: 196 KTEEAQKLLLEASNEGVPQAQFNLSLTLDSTKDRNEYIRLVKSAADAG-LTKACYAYGCA 254
           K  E+   L+     G+      L L ++ TKD      ++ +A D G L+    A GC+
Sbjct: 250 KRHESLTPLIGGGGSGIKMKDGTLVLPVEGTKDGKAVSLIIYTATDGGNLSNGMSADGCS 309

Query: 255 IEGDKNGKDLEYLLKAADKGH 275
                  KD   ++ A D G 
Sbjct: 310 DPSVVEWKDKLIMMTACDDGR 330



>EAY09949.1 on XP_001349219  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2595

 Score = 27.7 bits (60), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 4/61 (6%)

Query: 150  LGSFYQKGNMGLPQSTEQALEHYTNAVK----LGNSIAKFNLSVLLKEQGKTEEAQKLLL 205
            L  +Y K N  + ++ + +   Y N VK    LG+ +++    +L+K   K   A+KL L
Sbjct: 1803 LSRYYAKDNEKILEAIKNSFADYGNIVKGDDMLGDGLSEIIQKILVKLNEKKSNAEKLAL 1862

Query: 206  E 206
            +
Sbjct: 1863 Q 1863



>EAY09949.1 on XP_805786   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 581

 Score = 26.9 bits (58), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 8/85 (9%)

Query: 196 KTEEAQKLLLEASNEGVPQAQFNLSLTLDSTKDRNEYIRLVKSAADAG-LTKACYAYGCA 254
           K  E+   L+     G+      L L ++ TKD      ++ +A D G L+K   A GC+
Sbjct: 249 KQHESLTRLIGGGGSGLKMKDGTLVLPVEGTKDGKTVSLIIYTATDGGNLSKGMSADGCS 308

Query: 255 ----IEGDKNGKDLEYLLKAADKGH 275
               +E +   KD   ++ A D G 
Sbjct: 309 DPSVVEWE---KDKLMMMTACDDGR 330



>EAY09949.1 on XP_805183   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 231

 Score = 25.4 bits (54), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)

Query: 35 NNAEAQYLLSIAYNKKKTHEKLLQANELLTKSASAGYAPAQYKLGKLILNRK 86
          N+AE   LL ++YNK+K   KLLQ      + +      A+Y++  ++ N K
Sbjct: 41 NDAENAVLLGLSYNKEK-RWKLLQGGGKTEELSGTWETDAKYQVAIVLQNGK 91




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09950.1 Skp1 family, tetramerization domain
containing protein [Trichomonas vaginalis G3]
         (136 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_815156   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   0.56 

>EAY09950.1 on XP_815156   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 966

 Score = 26.6 bits (57), Expect = 0.56,   Method: Composition-based stats.
 Identities = 10/22 (45%), Positives = 14/22 (63%)

Query: 1  MKKSASSRSKKKEAPPPPPPPK 22
          M+ S    S K+++P P PPPK
Sbjct: 55 MRCSTGGASSKEKSPAPIPPPK 76




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09952.1 hypothetical protein TVAG_482260 [Trichomonas
vaginalis G3]
         (435 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609540  variant erythrocyte surface antigen-1, alpha subun...    29   0.46 
XP_001608668  variant erythrocyte surface antigen-1, alpha subun...    27   2.7  
AAL38219  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   26   4.4  
XP_652967  Vps35  (Establishment)  [Entamoeba histolytica]             26   5.1  
XP_001349740  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   6.7  
XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 26   6.9  

>EAY09952.1 on XP_001609540  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1349

 Score = 29.3 bits (64), Expect = 0.46,   Method: Composition-based stats.
 Identities = 38/167 (22%), Positives = 77/167 (46%), Gaps = 22/167 (13%)

Query: 199 RNLKEQIQIYEDTLKDVENAVNESVRQLNSSEKVLELVKFEYQGVKNSLETVLAESSKIH 258
           + L+E I+     L+D+  A+ E V QL ++++ L+    +  GV N+L+ V  E     
Sbjct: 685 KELREGIE----KLRDILEAIGEVVVQLGNAQERLDRGNADLGGVMNALKKV--EGVNNG 738

Query: 259 SDEYTKVMTEIKEDKQKISENQNIIKNKQQDMDQAQIEHNILENKKVAMISQLQKVLTEK 318
           ++++  V+ E+    +K+ E           +++A    ++ E  K A+ +    V  + 
Sbjct: 739 TNDFKGVLQEVLGRLEKLVEA----------LEKAGGLKDVKEKVKTALTAAKDVVGKQN 788

Query: 319 VSQISTKINTSSEVQD-----IVALQEKIWIDIEVARQEYLSVAKRH 360
            + +    N  S   D     + AL+E +  DI + +Q  L  AK++
Sbjct: 789 GTDVDPCKNLVSAAIDGLQKALDALKEGVEKDI-IEKQRRLLEAKKN 834



>EAY09952.1 on XP_001608668  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1337

 Score = 26.9 bits (58), Expect = 2.7,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 74/169 (43%), Gaps = 22/169 (13%)

Query: 66  VQQKIGQVRKEIQNLNDP-NVQSTFDEKRLVKKEEKLQELQQE-DKIYSQSIENYNKKLE 123
           V+QK+G+ +KE++   +    +   D K L + ++ +++ + E D +    +E   K LE
Sbjct: 720 VKQKLGEAKKELEKAKEAVESEVGMDGKELEEAKKAVEKAKTEGDNVRMAKLEKKMKALE 779

Query: 124 QYQAKLTAL--SNLIDTEVQTINFRIRNYKKIKSFATIYMTVGDFESQAMTLSERLNKLQ 181
             +  L  L  S   +  + T+     N   ++   +      D+ S    +S+ +N + 
Sbjct: 780 NAKDALNKLMTSGGSNGALNTLANGGGN-GSLQQIGSANEKDRDYSSAKDQISDAINGI- 837

Query: 182 KKKQKRNQTIKNLLVNER----------NLKEQIQIYEDTLKDVENAVN 220
                 NQT++ L + +R          ++ +   IYE T+ D++   N
Sbjct: 838 ------NQTLEALQLLKRASTTLNGHRDDISDVFMIYEKTITDLKEIYN 880



>EAY09952.1 on AAL38219  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2969

 Score = 26.2 bits (56), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 42/165 (25%)

Query: 12   KQLVQMTDEKNSMKTEIATLKMNIQQIPQLKQELAERIRLKQSDEMTLLNEMSEVQQKI- 70
            KQL+    EKN  K +I T + NI+QI Q   EL       Q+ +  ++N ++EV++KI 
Sbjct: 1198 KQLI----EKN--KNDILTYENNIEQIEQKNIELKTN---AQNKDDQIVNTLNEVKKKII 1248

Query: 71   -------------------GQVRKE---IQNLNDPNVQSTFDEKRLVKKEEKLQELQQED 108
                               G+V  +   +QN+ND +  +  DE   + +   + E++  D
Sbjct: 1249 YTYEKVDNQISNVLKNYEEGKVEYDKNVVQNVNDADDTNDIDEINDIDEINDIDEIKDID 1308

Query: 109  KI-------YSQSIENYNKKLEQYQAKLTALSNLIDTEVQTINFR 146
             I       +   I + +   ++Y     ALSN I TE++ IN +
Sbjct: 1309 HIKHFDDTKHFDDIYHADDTRDEYHI---ALSNYIKTELRNINLQ 1350



>EAY09952.1 on XP_652967  Vps35  (Establishment)  [Entamoeba histolytica]
          Length = 757

 Score = 26.2 bits (56), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 11/28 (39%), Positives = 22/28 (78%)

Query: 256 KIHSDEYTKVMTEIKEDKQKISENQNII 283
           +I +D+ T+++TEIKE+K+++ + Q  I
Sbjct: 707 QITADQITQIITEIKENKEQLDDAQTTI 734



>EAY09952.1 on XP_001349740  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3346

 Score = 25.8 bits (55), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 16/52 (30%), Positives = 32/52 (61%), Gaps = 2/52 (3%)

Query: 62   EMSEVQQKIGQVRKEIQNLNDPNVQSTF--DEKRLVKKEEKLQELQQEDKIY 111
            + +++++K  ++ K+ QN +  N  +T+  DEK +V    KL E  +++KIY
Sbjct: 2620 QWTKIKEKYEELYKKAQNSDTSNSGTTYPKDEKDVVSFLSKLHEKNKDNKIY 2671



>EAY09952.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 25.8 bits (55), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 6/83 (7%)

Query: 193  NLLVNERNLKEQIQIYEDTLKDVENAVNESVRQLNSSEKVLELV--KFEYQGVKNSLETV 250
            N  +N+ N+ E  + +++ L ++ N  NES   +N+  K+ E++    +Y  +K   E  
Sbjct: 1758 NEYINDYNINENFEKHQNILNEIYNGFNESYNIINT--KMTEIINDNLDYNEIKEIKEVA 1815

Query: 251  LAESSKIHS--DEYTKVMTEIKE 271
              E  K++   DE    +  IKE
Sbjct: 1816 QTEYDKLNKKVDELKNYLNNIKE 1838




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09953.1 hypothetical protein TVAG_482270 [Trichomonas
vaginalis G3]
         (367 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001608795  variant erythrocyte surface antigen-1, alpha subun...    25   5.9  
XP_001351513  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   9.6  

>EAY09953.1 on XP_001608795  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1323

 Score = 25.4 bits (54), Expect = 5.9,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 4/70 (5%)

Query: 273 SQYDLTDIQAEIDQCQLEISDLEHKLEEENKNISVLQTEKK----CAIENANKKSLENEE 328
           +Q D+T++    ++    I  + + L+E  K +  L+ EK+    C +       +E+ E
Sbjct: 743 AQNDVTNVDPGKNKISAAIKGVRNVLDELRKGVEGLKQEKENEIMCGLSEVFGVPVEDNE 802

Query: 329 IIKQLTKELN 338
           + K L +E++
Sbjct: 803 LEKALQQEVS 812



>EAY09953.1 on XP_001351513  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2152

 Score = 25.0 bits (53), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)

Query: 136 KELFEKSNKSLNTAETKLDSLIQKIQSITEPSLETEGVQLKYEVKKANLEQL 187
           ++L+ + NK  N    KL+  ++KI       L   GV+ +YE  K N  QL
Sbjct: 202 RDLY-RGNKKENKQREKLEENLRKIFENIYEGLSNNGVKARYEGDKENFYQL 252




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09954.1 HCaRG protein [Trichomonas vaginalis G3]
         (177 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001611441  variant erythrocyte surface antigen-1, beta subuni...    26   1.3  
XP_821390   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   2.3  
XP_001608667  variant erythrocyte surface antigen-1, beta subuni...    25   3.6  
XP_001609619  variant erythrocyte surface antigen-1, beta subuni...    24   6.0  
XP_001612315  variant erythrocyte surface antigen-1, beta subuni...    23   9.5  
XP_808800   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   9.7  

>EAY09954.1 on XP_001611441  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 1205

 Score = 26.2 bits (56), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 27/59 (45%)

Query: 72  KPVLRDAGIGESSINYIADQYSAKVELIRAKLATISAGYPKVVGCNWRLDYAVSNSETG 130
           +PVL D G+   S +   D  +   E+I+  +  ++ G  K VG N + D      + G
Sbjct: 91  QPVLTDLGLLGGSTSAARDTCAGGTEVIKTLIEQLALGLQKWVGWNDKEDECCLKGDKG 149



>EAY09954.1 on XP_821390   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 940

 Score = 25.4 bits (54), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 26/111 (23%), Positives = 54/111 (48%), Gaps = 5/111 (4%)

Query: 47  EADAQIGLASLILLFARQGSVPETMKPVLRDAGIGESSINYIADQYSAKVELIRAKLATI 106
           E+D+  G+AS IL+  + G+ PE    VL+DA   +      + +   +V++ R      
Sbjct: 116 ESDSFTGIASQILMMGK-GNEPEE---VLKDAKDTQVLEEATSPEEEKRVDVSRPTAVAE 171

Query: 107 SAGYPKVVGCNWRLDYAVSNSETGSVLKPLFFVQLDL-EGGSQLNFTCTEE 156
                 +VG +   D A   + +  +   L  V+ ++ EGG+++ ++ T++
Sbjct: 172 GGKIYMLVGKHSHEDVAECKATSEKIKSGLLLVKGEVGEGGNKIRWSDTDD 222



>EAY09954.1 on XP_001608667  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 1139

 Score = 24.6 bits (52), Expect = 3.6,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 2/47 (4%)

Query: 73  PVLRDAGIGESSINYIADQYSAKVELIRAKLATISAGYPKVVGCNWR 119
           PVL D G+   S +   D  +   E+I+A +  ++ G  K VG  W+
Sbjct: 98  PVLTDLGLLGDSTSAARDTCAGGTEVIKALIDHLALGLQKWVG--WK 142



>EAY09954.1 on XP_001609619  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 1086

 Score = 24.3 bits (51), Expect = 6.0,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query: 69  ETMKPVLRDAGIGESSINYIADQYSAKVELIRAKLATISAGYPKVVG 115
           + +KPVL D G+   S    +   +   E+I A +  ++ G  K VG
Sbjct: 88  DIVKPVLTDLGLLGGSTGAASSTCAGGTEVIGALIDQLAQGLQKWVG 134



>EAY09954.1 on XP_001612315  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 1140

 Score = 23.5 bits (49), Expect = 9.5,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 20/43 (46%)

Query: 73  PVLRDAGIGESSINYIADQYSAKVELIRAKLATISAGYPKVVG 115
           PVL+D G+   S     D  +   E+I   +  ++ G  K VG
Sbjct: 94  PVLKDLGLLSGSTGAARDTCAGGTEVIGTLIDQLAQGLQKWVG 136



>EAY09954.1 on XP_808800   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 776

 Score = 23.5 bits (49), Expect = 9.7,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 6/59 (10%)

Query: 75  LRDAGIGESSINYIADQYSAKVELIRAKLATISAGYPKVVGCNWRL--DYAVSNSETGS 131
           L + G GESS+  ++ + +A+++ +R  LAT    + KV G   +L    A +N  TG+
Sbjct: 445 LYEKGGGESSLGMVSVRLTAQLKHVREVLAT----WKKVDGRVSKLCPSTAATNPSTGN 499




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09959.1 hypothetical protein TVAG_482330 [Trichomonas
vaginalis G3]
         (360 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001349517  PfEMP1  (Establishment)  [Plasmodium falciparum]         30   0.20 
XP_001351563  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   1.6  
XP_001610567  variant erythrocyte surface antigen-1, alpha subun...    26   3.4  
XP_001610721  variant erythrocyte surface antigen-1, alpha subun...    25   7.8  
XP_001608785  variant erythrocyte surface antigen-1, alpha subun...    25   7.9  
XP_001349438  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   8.2  

>EAY09959.1 on XP_001349517  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 440

 Score = 30.0 bits (66), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 23/124 (18%)

Query: 22  LKDDEIERLKHDIVQTNAEIAQIEDQINIEKDKYNHQEAKVVGKERKQKASIETIKTR-L 80
            +DDE  +LK D ++   +        NI+KD        ++     +K  I  I+ R L
Sbjct: 170 FRDDEWNQLKQDFIEQYLQ--------NIQKDF-------ILHDSMDEKPFITQIQDRFL 214

Query: 81  NTSHSERIYQITQQQSEVINEIHQEF-ETKLAQIEQYS------DALTQQRTKGITDEIK 133
           ++SH E IY I     E IN I+    +TK      Y+      D+L   +   I DE+ 
Sbjct: 215 DSSHEEVIYNIDWNVPENINRINNIMHDTKYCSNNLYTGTDLINDSLNGNQYIDIYDEML 274

Query: 134 KTKE 137
           K KE
Sbjct: 275 KRKE 278



>EAY09959.1 on XP_001351563  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2149

 Score = 27.3 bits (59), Expect = 1.6,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 24/38 (63%)

Query: 120 LTQQRTKGITDEIKKTKEMIDKVKQKISDQEKRGHSDT 157
           + Q+   G  D+ K  K+++DK+ Q++ D+ K G ++T
Sbjct: 1   MAQKVGGGGKDDYKDAKDLLDKIGQQVHDKVKNGDAET 38



>EAY09959.1 on XP_001610567  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1315

 Score = 26.2 bits (56), Expect = 3.4,   Method: Composition-based stats.
 Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 14/90 (15%)

Query: 133 KKTKEMIDKVKQKISDQEKRGHSDTEDEIMENQEIEINRVKALENALKDKNKERYE---- 188
           K  +E + KV ++++ + K        E+++     + ++   + AL+ K KE  E    
Sbjct: 658 KVMRETLGKVNEEVALKVK--------EVLQAIGNVVVQLGNAQEALEGKKKEAIEGVKA 709

Query: 189 SLMSAKQQLSQCVTTLEESEKEHRINLDNL 218
            L  AK+ L +  T LEE+ K  ++N D L
Sbjct: 710 KLQEAKEGLDKARTALEEAAK--KVNGDGL 737



>EAY09959.1 on XP_001610721  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1331

 Score = 25.0 bits (53), Expect = 7.8,   Method: Composition-based stats.
 Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 3/43 (6%)

Query: 144 QKISD--QE-KRGHSDTEDEIMENQEIEINRVKALENALKDKN 183
           Q+IS+  QE ++ +S  +D I E      + ++AL+N LKDKN
Sbjct: 775 QQISNSGQEWEKDYSSAKDRISEAISKVRDALEALKNELKDKN 817



>EAY09959.1 on XP_001608785  variant erythrocyte surface antigen-1, alpha
          subunit   (Establishment)  [Babesia bovis]
          Length = 954

 Score = 25.0 bits (53), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 55 YNHQEAKVVGKERKQKASIETIKTRLNTSHS 85
          YN  +    G E+ + A+ ET+K  LN   S
Sbjct: 64 YNGYQGDTNGAEKNKGANAETVKGHLNGLFS 94



>EAY09959.1 on XP_001349438  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2265

 Score = 25.0 bits (53), Expect = 8.2,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 51/126 (40%), Gaps = 4/126 (3%)

Query: 124 RTKGITDEIKKTKEMIDKVKQKISDQEKRGHSDTEDEIMENQEIEINRVKALENALKDKN 183
           R  G + +    K M D++ + + DQ K+G ++T  E +  Q      +     +  D  
Sbjct: 6   RQVGGSPQDDDAKNMFDRIGKDVYDQVKKGVAETYKEALTGQLSLATLLGVESASTTDPC 65

Query: 184 KERYESLMSAKQQLSQCVTTLEESEKEHRINLDNLLQKLRQLDEKYKDRLKRMKDVHERE 243
              Y  L+S     ++      ES  E R +     +++ + DEK     K  +  +E E
Sbjct: 66  GLDYSKLISGSGVAARGHPCGNESVSEKRFS----KERVDEYDEKKIKDNKGNRGNNEGE 121

Query: 244 IEPLKR 249
             P +R
Sbjct: 122 CAPYRR 127




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09961.1 hypothetical protein TVAG_482350 [Trichomonas
vaginalis G3]
         (115 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_808161   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   0.52 
XP_805885   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   1.8  
XP_815560   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   2.1  
XP_814486   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   5.3  
XP_812069   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   5.6  
XP_818295   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   5.6  
XP_817612   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   5.7  
XP_805365   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   7.7  

>EAY09961.1 on XP_808161   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 885

 Score = 26.2 bits (56), Expect = 0.52,   Method: Composition-based stats.
 Identities = 11/16 (68%), Positives = 11/16 (68%)

Query: 65  TCESKGLSEPCAATEG 80
           T ESKG  EP  ATEG
Sbjct: 793 TAESKGQEEPAVATEG 808



>EAY09961.1 on XP_805885   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 130

 Score = 24.3 bits (51), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 10/17 (58%), Positives = 10/17 (58%)

Query: 66 CESKGLSEPCAATEGKC 82
           ESKG  EP  ATEG  
Sbjct: 39 AESKGQEEPAVATEGGV 55



>EAY09961.1 on XP_815560   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 922

 Score = 24.3 bits (51), Expect = 2.1,   Method: Composition-based stats.
 Identities = 10/14 (71%), Positives = 10/14 (71%)

Query: 67  ESKGLSEPCAATEG 80
           ESKG  EP  ATEG
Sbjct: 832 ESKGQEEPAVATEG 845



>EAY09961.1 on XP_814486   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 948

 Score = 23.1 bits (48), Expect = 5.3,   Method: Composition-based stats.
 Identities = 9/16 (56%), Positives = 10/16 (62%)

Query: 65  TCESKGLSEPCAATEG 80
           T ES+G  EP   TEG
Sbjct: 856 TAESRGQEEPAVKTEG 871



>EAY09961.1 on XP_812069   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 948

 Score = 23.1 bits (48), Expect = 5.6,   Method: Composition-based stats.
 Identities = 9/16 (56%), Positives = 10/16 (62%)

Query: 65  TCESKGLSEPCAATEG 80
           T ES+G  EP   TEG
Sbjct: 856 TAESRGQEEPAVETEG 871



>EAY09961.1 on XP_818295   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 922

 Score = 23.1 bits (48), Expect = 5.6,   Method: Composition-based stats.
 Identities = 9/14 (64%), Positives = 10/14 (71%)

Query: 67  ESKGLSEPCAATEG 80
           ESKG  +P  ATEG
Sbjct: 832 ESKGQEQPAVATEG 845



>EAY09961.1 on XP_817612   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 922

 Score = 23.1 bits (48), Expect = 5.7,   Method: Composition-based stats.
 Identities = 9/14 (64%), Positives = 10/14 (71%)

Query: 67  ESKGLSEPCAATEG 80
           ESKG  +P  ATEG
Sbjct: 832 ESKGQEQPAVATEG 845



>EAY09961.1 on XP_805365   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 144

 Score = 22.3 bits (46), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 9/17 (52%), Positives = 10/17 (58%)

Query: 66 CESKGLSEPCAATEGKC 82
           ESKG  +P  ATEG  
Sbjct: 53 SESKGQEQPAVATEGGA 69




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09970.1 retinitis pigmentosa GTPase regulator-like
protein, putative [Trichomonas vaginalis G3]
         (830 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PFE0340c  ROM4  (Invasion)  [Plasmodium falciparum]                    47   4e-06
XP_814930   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           32   0.15 
XP_804223   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           31   0.33 
XP_001349030  PfEMP1  (Establishment)  [Plasmodium falciparum]         30   0.53 
XP_827084  VSG  (Establishment)  [Trypanosoma brucei]                  28   1.9  
XP_806744   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   2.3  
XP_812956   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   3.2  

>EAY09970.1 on PFE0340c  ROM4  (Invasion)  [Plasmodium falciparum]
          Length = 759

 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 103/199 (51%), Gaps = 34/199 (17%)

Query: 266 SSSSSDDEKDKDKKKSSSSSDEEK----DKKEENAENTTEEKEIHI--------EEEKKK 313
            S++  + K+ +KK+SS  SD E      KK+ +  N  E+K++ I         EEKKK
Sbjct: 2   GSNTGFNPKNAEKKRSSIFSDLEIPQGDVKKKASIFNNMEKKKMTIFKKTKGENNEEKKK 61

Query: 314 AS----SSSDEEKEKEKKEEVLEENSEEKELKEANVEEEKKKSSSSSDEEKEKENKEEVP 369
            S    ++++       K  +   N+E+KE    N +E+KK  S + DE+KE      + 
Sbjct: 62  RSIFNNNNNNNNNNNTMKINIFNNNNEKKESFSINGDEKKKSFSINGDEKKESF---SIN 118

Query: 370 EESKEESKEIHVEEEKKKSSSSSDDEKEKEEKEEKKKSSSSSDDE-KEKKEENPEEK--- 425
            + K+ES  I+ ++EKK+S   + DEKEK        S S + DE KE    N +EK   
Sbjct: 119 GDEKKESFLIN-KDEKKESFLINKDEKEK--------SFSINGDEKKESFSINGDEKKES 169

Query: 426 --IDEEEKKKSSSSSDDEK 442
             I+E+E KKS S +DDE+
Sbjct: 170 FSINEDETKKSCSINDDER 188




 Score = 43.1 bits (100), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 140/300 (46%), Gaps = 56/300 (18%)

Query: 144 SSSSSDDEKDKDKKKSSSSSDEEK----DKKEENAENTTEEKEIHI--------EEEKKK 191
            S++  + K+ +KK+SS  SD E      KK+ +  N  E+K++ I         EEKKK
Sbjct: 2   GSNTGFNPKNAEKKRSSIFSDLEIPQGDVKKKASIFNNMEKKKMTIFKKTKGENNEEKKK 61

Query: 192 AS----SSSDEEKEKEKKEEVLEENSEEKELKEANVEEEKKKSSSSSDEEKEKENKEEVP 247
            S    ++++       K  +   N+E+KE    N +E+KK  S + DE+KE      + 
Sbjct: 62  RSIFNNNNNNNNNNNTMKINIFNNNNEKKESFSINGDEKKKSFSINGDEKKE---SFSIN 118

Query: 248 EESKEESKEIHVEEEKKKSSSSSDDEKDKDKKKSSSSSDEEKDKKEENAENTTEEKEIHI 307
            + K+ES  I+ ++EKK+S   + DEK+K     S + DE+K+    N +   E   I+ 
Sbjct: 119 GDEKKESFLIN-KDEKKESFLINKDEKEKS---FSINGDEKKESFSINGDEKKESFSIN- 173

Query: 308 EEEKKKASSSSDEEKEKEKKEEVLEENSEEKELKEANVEEEKKKSSSSSDEEKEKENKEE 367
           E+E KK+ S +D+    E+K  +   N             EKKK+S  SD +  K     
Sbjct: 174 EDETKKSCSINDD----ERKISIFSNN-------------EKKKNSIYSDTQSSK----- 211

Query: 368 VPEESKEESKEIHVEEEKKKSSSSSDDEKEKEEKEEKKKSSSSSDDEKEKKEENPEEKID 427
                +E+ K I +  +  ++S++ DD   K   ++     S   D K KK      K+D
Sbjct: 212 -----REDEKRISIFSD-LETSTNIDDISSKRNSQKL----SVYGDNKLKKGSLLSPKVD 261




 Score = 36.2 bits (82), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 99/216 (45%), Gaps = 47/216 (21%)

Query: 92  KKSSSSDEEKEK----KKSSSSSDEEKDKEQKEENAEERKEEIENGEIHV---EEEKKKS 144
           K S  ++ EK+K    KK+   ++EEK K     N           +I++     EKK+S
Sbjct: 33  KASIFNNMEKKKMTIFKKTKGENNEEKKKRSIFNNNNNNNNNNNTMKINIFNNNNEKKES 92

Query: 145 SSSSDDEKDKDKKKSSSSSDEEKDKKEENAENTTEEKEIHIEEEKKKASSSSDEEKEKEK 204
            S + DEK   KK  S + DE+K+    N +                           EK
Sbjct: 93  FSINGDEK---KKSFSINGDEKKESFSINGD---------------------------EK 122

Query: 205 KEEVLEENSEEKELKEANVEEEKKKSSSSSDEEKEKENKEEVPEESKEESKEIHVEEEKK 264
           KE  L    E+KE    N +E++K  S + DE+KE      +  + K+ES  I+ E+E K
Sbjct: 123 KESFLINKDEKKESFLINKDEKEKSFSINGDEKKE---SFSINGDEKKESFSIN-EDETK 178

Query: 265 KSSSSSDDEK------DKDKKKSSSSSDEEKDKKEE 294
           KS S +DDE+      + +KKK+S  SD +  K+E+
Sbjct: 179 KSCSINDDERKISIFSNNEKKKNSIYSDTQSSKRED 214




 Score = 35.0 bits (79), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 96/216 (44%), Gaps = 42/216 (19%)

Query: 92  KKSSSSDEEKEKKKSSSSSDEEKDKEQKEENAEERKEEIENGEIHVEEEKKKSSSSSDDE 151
           KK S S    EKKKS S + +EK KE    N +E+KE      +  ++EKK+S   + DE
Sbjct: 89  KKESFSINGDEKKKSFSINGDEK-KESFSINGDEKKESF----LINKDEKKESFLINKDE 143

Query: 152 KDKDKKKSSSSSDEEKDKKEENAENTTEEKEIHIEEEKKKASSSSDEEKEKEKKEEVLEE 211
           K+K     S + DE+K+    N +   E   I+ +E KK  S + D     E+K  +   
Sbjct: 144 KEKS---FSINGDEKKESFSINGDEKKESFSINEDETKKSCSINDD-----ERKISIFSN 195

Query: 212 NSEEKELKEANVEEEKKKSSSSSDEEKEKENKEEVPEESKEESKEIHVEEEKKKSSSSSD 271
           N             EKKK+S  SD +  K          +E+ K I +  + + S++  D
Sbjct: 196 N-------------EKKKNSIYSDTQSSK----------REDEKRISIFSDLETSTNIDD 232

Query: 272 DEKDKDKKKSSSSSDEEKDK------KEENAENTTE 301
               ++ +K S   D +  K      K +N  NT +
Sbjct: 233 ISSKRNSQKLSVYGDNKLKKGSLLSPKVDNYRNTID 268




 Score = 28.1 bits (61), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 19/122 (15%)

Query: 65  EEKEKSSSSSSDDENDKDKEKEDKKEGKKSSSSDEEKEKKKSSSSSDEEKDKEQKEENAE 124
           +EK+KS S + D++ +      D+K   K S    + EKK+S   + +EK+K     N +
Sbjct: 98  DEKKKSFSINGDEKKESFSINGDEK---KESFLINKDEKKESFLINKDEKEKSF-SINGD 153

Query: 125 ERKEEIE-NGE-------IHVEEEKKKSSSSSDDEK------DKDKKKSSSSSDEEKDKK 170
           E+KE    NG+       I+ E+E KKS S +DDE+      + +KKK+S  SD +  K+
Sbjct: 154 EKKESFSINGDEKKESFSIN-EDETKKSCSINDDERKISIFSNNEKKKNSIYSDTQSSKR 212

Query: 171 EE 172
           E+
Sbjct: 213 ED 214




 Score = 27.7 bits (60), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 49/105 (46%), Gaps = 22/105 (20%)

Query: 64  KEEKEKSSSSSSDDENDKDKEKEDKKEGKKSSSSDEEKEKKKSSSSSDEEKDKEQKEENA 123
           K+EKEKS S + D++ +      D+K   K S S  E E KKS S +D+E+       N 
Sbjct: 141 KDEKEKSFSINGDEKKESFSINGDEK---KESFSINEDETKKSCSINDDERKISIFSNN- 196

Query: 124 EERKEEIENGEIHVEEEKKKSSSSSDDEKDK--DKKKSSSSSDEE 166
                           EKKK+S  SD +  K  D+K+ S  SD E
Sbjct: 197 ----------------EKKKNSIYSDTQSSKREDEKRISIFSDLE 225



>EAY09970.1 on XP_814930   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 938

 Score = 32.0 bits (71), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 37/59 (62%)

Query: 381 VEEEKKKSSSSSDDEKEKEEKEEKKKSSSSSDDEKEKKEENPEEKIDEEEKKKSSSSSD 439
           VE++K+K S  S+D+KE  + E+KK+S  S D +     E+ +E  D E+KK+S  S D
Sbjct: 761 VEDKKEKGSGDSEDKKESGDSEDKKESGDSEDKKGSGDSEDKKESGDSEDKKESGDSED 819




 Score = 30.0 bits (66), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 51/104 (49%), Gaps = 5/104 (4%)

Query: 335 SEEKELKEANVEEEKKKSSSSSDEEKEKENKEEVPEESKEESKEIHVEEEKKKSSSSSDD 394
            E K +KE  VE++K+K S  S+++KE  + E+  E    E K+   + E KK S  S+D
Sbjct: 753 GELKMIKE--VEDKKEKGSGDSEDKKESGDSEDKKESGDSEDKKGSGDSEDKKESGDSED 810

Query: 395 EKEKEEKEEKKKSSSSSDDEKEKKEENPEEKIDEEEKKKSSSSS 438
           +KE  + E+KK    S D        N      EEE    S+S 
Sbjct: 811 KKESGDSEDKK---GSGDGAFTPAVSNATTHTAEEETVNQSASG 851



>EAY09970.1 on XP_804223   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 746

 Score = 30.8 bits (68), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 60/137 (43%), Gaps = 5/137 (3%)

Query: 58  EPAEFTKEEKEKSSSSSSDDENDKDKEKEDKKEGKKSSSSDEEKEKKKSSSSSDEEKDKE 117
           +PAE T+    + SS S D+E  +++E+ D + G  +SS     +   ++ + D     +
Sbjct: 533 QPAELTEVTDVEMSSGSYDEEMPEEEEEADDRSGGSTSSVGASSDMDTATETVDSGHQVQ 592

Query: 118 QKEENAEERKEEIENGEIHVEEEKKKSSSSSDDEKDKDKKKSSSSSDEEKDKKEENAENT 177
           Q  E A E  +    G      E+  S  + D   ++     SS +    D +  +AE+T
Sbjct: 593 QSTEPATESDDVRSTGTGTTGAEQSLSLEAGDGNSERTMGSDSSLTPSRTDAEPTSAEDT 652

Query: 178 -----TEEKEIHIEEEK 189
                TE  E + E+ K
Sbjct: 653 DDVSRTEGSEFYFEDGK 669



>EAY09970.1 on XP_001349030  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2215

 Score = 30.4 bits (67), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 12/25 (48%), Positives = 13/25 (52%)

Query: 722 ANYDGYTPLHIAIMKGDCSTVAALI 746
            NYDGY      I KG C TV A +
Sbjct: 428 TNYDGYESKFYKIFKGKCGTVDAFL 452



>EAY09970.1 on XP_827084  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 487

 Score = 28.5 bits (62), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 46/114 (40%), Gaps = 17/114 (14%)

Query: 108 SSSDEEKDKEQKEENAEERKEEIENGEIHVEEEKKKSSSSSDDEKDKDKKKSSSSSDEEK 167
           S SD E+  +  EE A++RK   E  E H +      S     EKDK    + S+  +E 
Sbjct: 75  SFSDLERATKDWEEIADDRKHSHETNEGHRKFWTGARSKLGGPEKDKYAVWTGSALSKED 134

Query: 168 DKKEENAENTTEEKEIHIEEEKKKASSSSDEEKEKEKKEEVLEENSEEKELKEA 221
            +K  NA    E                 D  K+ +    +L+E S EK L EA
Sbjct: 135 KRKVANAAERAE-----------------DCMKDNDGLWRILKETSIEKNLIEA 171



>EAY09970.1 on XP_806744   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 789

 Score = 28.1 bits (61), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 28/120 (23%), Positives = 52/120 (43%)

Query: 58  EPAEFTKEEKEKSSSSSSDDENDKDKEKEDKKEGKKSSSSDEEKEKKKSSSSSDEEKDKE 117
           +PAE T+    + SS S D+E  +++ + D + G  +SS     +   ++ + D     +
Sbjct: 576 QPAELTEVTDVEMSSGSYDEEMPEEEGEADDRSGGSTSSVGASSDMDTATETVDSGHQVQ 635

Query: 118 QKEENAEERKEEIENGEIHVEEEKKKSSSSSDDEKDKDKKKSSSSSDEEKDKKEENAENT 177
           Q  E A E  +    G      E+  S  + D   ++     SS +    D +  +AE+T
Sbjct: 636 QSTEPATENDDVRSTGTGTTGAEQSLSLEAGDGNSERTMGSDSSLTPSRTDAEPTSAEDT 695



>EAY09970.1 on XP_812956   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1005

 Score = 27.7 bits (60), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 59/137 (43%), Gaps = 5/137 (3%)

Query: 58  EPAEFTKEEKEKSSSSSSDDENDKDKEKEDKKEGKKSSSSDEEKEKKKSSSSSDEEKDKE 117
           + AE T+    +  S S D+E  +++E+ D + G  +SS     +   ++ + D E   +
Sbjct: 792 QSAELTEVTDVEMYSGSYDEEIPEEEEEADDRSGGSTSSVGATSDMDTATETVDSEHQVQ 851

Query: 118 QKEENAEERKEEIENGEIHVEEEKKKSSSSSDDEKDKDKKKSSSSSDEEKDKKEENAENT 177
           Q  E A E  +    G      E+  S  + D   ++     SS +    D +  +AE+T
Sbjct: 852 QSTEPATEGDDVRSTGTGTTGAEQSLSLEAGDGNSERTMGSDSSLTPSRTDAEPTSAEDT 911

Query: 178 -----TEEKEIHIEEEK 189
                TE  E + E+ K
Sbjct: 912 DDVSRTEGSEFYFEDGK 928




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09974.1 CK1 family protein kinase [Trichomonas
vaginalis G3]
         (347 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    42   2e-05
XP_819341   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   3.0  
XP_001349437  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   4.7  
XP_815166   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   5.0  
XP_818403   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   6.2  

>EAY09974.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 42.4 bits (98), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 8/162 (4%)

Query: 4   ESELLTGQIIDGFQVLNLIGQGGFGNIYMVSEISTQTNFAMKTEWLNAEHRGIAREASIL 63
           E+  L   + D ++++  IG+G F  ++      T+    +       + + I RE  IL
Sbjct: 43  ENITLKWNVPDSYEIVRKIGRGKFSEVFEGLNTVTKDK-CVIKILKPVKKKKIKREIKIL 101

Query: 64  SRLQGSPMFPRIKKIGETEKFRY--FIMELLGHSLSKIKHEYPNKRLSVQLALRCGIQML 121
             L+G P   ++  I +  + R    I E + ++    K  YP   L++Q       Q+L
Sbjct: 102 QNLRGGPNIIKLLDIVKDPQSRTPSLIFEHVNNT--DFKTLYPT--LTIQDIKYYIYQLL 157

Query: 122 KCIEQLHKHGFIHRDIKPGNFLVRSDNIYALVLIDFGLACSY 163
           K +   H  G +HRDIKP N ++  +    L LID+GLA  Y
Sbjct: 158 KAMNYCHSQGIMHRDIKPHNVMIDHEKK-ILRLIDWGLAEFY 198



>EAY09974.1 on XP_819341   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 888

 Score = 26.2 bits (56), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 20/50 (40%)

Query: 77  KIGETEKFRYFIMELLGHSLSKIKHEYPNKRLSVQLALRCGIQMLKCIEQ 126
           K G  E F     ELL  S  + K E    +L  Q+ L C     KC  Q
Sbjct: 119 KNGNEEDFTGIASELLKLSDEQKKVELDKTKLRTQVLLECTADKEKCASQ 168



>EAY09974.1 on XP_001349437  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2231

 Score = 25.8 bits (55), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 7/95 (7%)

Query: 219 PWKRCTGKEESLKQRKGVRPKDICNYLPK-----EMTKIYNNIIKLKFEETPDYALIYDL 273
           P K   GK+E +KQ  G+ P D   Y  K     E+++  +        E      ++D 
Sbjct: 684 PIKDHFGKQEDIKQETGMDPGDFLEYYLKLQFFEEVSEEKSQTGDEDANEKKRIKEMFDK 743

Query: 274 LKTSINKIAPESKNSLCVDLLGEEEIAKMSKSKLE 308
                +K+A  S     +D + EEE+   +K K +
Sbjct: 744 KNQRTDKVA--SNEETIIDFMLEEELKDATKCKQD 776



>EAY09974.1 on XP_815166   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 894

 Score = 25.8 bits (55), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 15/45 (33%), Positives = 18/45 (40%)

Query: 82  EKFRYFIMELLGHSLSKIKHEYPNKRLSVQLALRCGIQMLKCIEQ 126
           E F     ELL  S  + K E    +L  Q+ L C     KC  Q
Sbjct: 118 EDFTGIASELLTLSDEQTKVELDKTKLRTQVLLECSADKEKCASQ 162



>EAY09974.1 on XP_818403   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 957

 Score = 25.4 bits (54), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 3/51 (5%)

Query: 79  GETEKFRYFI---MELLGHSLSKIKHEYPNKRLSVQLALRCGIQMLKCIEQ 126
           G+ E   YF     ELL  S  + K E    +L  Q+ L C     KC  Q
Sbjct: 120 GKNENEEYFAGIASELLTLSDEQAKVELDKTKLKTQVLLECTADKEKCASQ 170




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09977.1 hypothetical protein TVAG_127860 [Trichomonas
vaginalis G3]
         (236 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351877  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   3.0  
XP_817882   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   7.7  

>EAY09977.1 on XP_001351877  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2270

 Score = 25.8 bits (55), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 18/98 (18%)

Query: 150 DVIAFLKKCKENSTDNAMVFVKENVAGHDFKAAKSEYEYNSEKNA--------------- 194
           DV +FL+K         +   KEN+   DFK A +    N  K                 
Sbjct: 447 DVDSFLEKLNNEEICKKITDEKENI---DFKTADNSLNKNINKEGTFYHSKYCEVCPGCG 503

Query: 195 IHRTYNHWIELFNTAGLILEEYRIQPDIPDNMLTVVLF 232
           + R  + W E       + + Y+I+ D P N + V+ F
Sbjct: 504 VERNGSGWEEKSGGTCDVKKPYKIRDDAPFNDINVLSF 541



>EAY09977.1 on XP_817882   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 753

 Score = 24.3 bits (51), Expect = 7.7,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 15/24 (62%)

Query: 15  YANKLDKWYIESRFYWSTQEATVE 38
           Y++    WYI+S + WST  A V+
Sbjct: 139 YSSDAVAWYIDSAWDWSTLVAEVK 162




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09978.1 hypothetical protein TVAG_127870 [Trichomonas
vaginalis G3]
         (134 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_810393   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.092
XP_815560   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   2.5  
XP_818883   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   2.6  
XP_846885  VSG  (Establishment)  [Trypanosoma brucei]                  24   3.1  
XP_817612   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   3.3  
XP_805884   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   4.4  
XP_818295   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   4.7  
XP_001612315  variant erythrocyte surface antigen-1, beta subuni...    23   7.6  

>EAY09978.1 on XP_810393   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 122

 Score = 28.1 bits (61), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 23/61 (37%), Gaps = 1/61 (1%)

Query: 17 GCCQQQQPAT-WRNDPIWGGWSTYQGADLTREGTVKIPESKYRQFVAWKEFLEARKRFLD 75
          G      PAT  RND + GG S       T  G  KIP        +  E L    +F D
Sbjct: 30 GTNSSTDPATVHRNDNVSGGASAAPTHLSTAHGEAKIPSEFNATIPSGHELLPEHGQFRD 89

Query: 76 L 76
          L
Sbjct: 90 L 90



>EAY09978.1 on XP_815560   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 922

 Score = 24.6 bits (52), Expect = 2.5,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 24/45 (53%), Gaps = 3/45 (6%)

Query: 76  LLRIDVENQMQQRQNFNPQNQFNFQRPPFPPNWGLYPNNFGQFPP 120
           + +I V++ +  +    P+++  F   P+   W  +P++FG F P
Sbjct: 135 MAQISVDDGVTWQSYAGPEDRDAFAASPY---WLPFPSSFGPFEP 176



>EAY09978.1 on XP_818883   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 980

 Score = 24.6 bits (52), Expect = 2.6,   Method: Composition-based stats.
 Identities = 20/61 (32%), Positives = 23/61 (37%), Gaps = 1/61 (1%)

Query: 17  GCCQQQQPAT-WRNDPIWGGWSTYQGADLTREGTVKIPESKYRQFVAWKEFLEARKRFLD 75
           G      PAT  RND + GG S       T  G  KIP        +  E L    +F D
Sbjct: 888 GTNSSTDPATVHRNDNVSGGASAAPTHLSTAHGEAKIPSEFNATIPSGHELLLEHGQFRD 947

Query: 76  L 76
           L
Sbjct: 948 L 948



>EAY09978.1 on XP_846885  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 525

 Score = 24.3 bits (51), Expect = 3.1,   Method: Composition-based stats.
 Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 4/23 (17%)

Query: 7   CNCA----QNAGGCGCCQQQQPA 25
           C CA    QNAGG   C   QPA
Sbjct: 230 CICAGEQSQNAGGFKACSNAQPA 252



>EAY09978.1 on XP_817612   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 922

 Score = 24.3 bits (51), Expect = 3.3,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 24/45 (53%), Gaps = 3/45 (6%)

Query: 76  LLRIDVENQMQQRQNFNPQNQFNFQRPPFPPNWGLYPNNFGQFPP 120
           + +I V++ +  +    P+++  F   P+   W  +P++FG F P
Sbjct: 135 MAQISVDDGVTWQSYAGPEDRDAFAASPY---WLPFPSSFGPFEP 176



>EAY09978.1 on XP_805884   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 438

 Score = 23.9 bits (50), Expect = 4.4,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 22/45 (48%), Gaps = 3/45 (6%)

Query: 76  LLRIDVENQMQQRQNFNPQNQFNFQRPPFPPNWGLYPNNFGQFPP 120
           + +I V+     R    P+++  F   P+   W  +P++FG F P
Sbjct: 134 MAQISVDGGRTWRSYAGPEDRDAFAARPY---WLPFPSSFGPFGP 175



>EAY09978.1 on XP_818295   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 922

 Score = 23.9 bits (50), Expect = 4.7,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 23/45 (51%), Gaps = 3/45 (6%)

Query: 76  LLRIDVENQMQQRQNFNPQNQFNFQRPPFPPNWGLYPNNFGQFPP 120
           + +I V++    +    P+++  F   P+   W  +P++FG F P
Sbjct: 135 MAQISVDDGRTWQSYAGPEDRDAFAASPY---WLPFPSSFGPFEP 176



>EAY09978.1 on XP_001612315  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 1140

 Score = 23.1 bits (48), Expect = 7.6,   Method: Composition-based stats.
 Identities = 8/20 (40%), Positives = 8/20 (40%)

Query: 7   CNCAQNAGGCGCCQQQQPAT 26
           C C    GG  CC     AT
Sbjct: 156 CTCPGTRGGTNCCNSASAAT 175




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09982.1 hypothetical protein TVAG_127910 [Trichomonas
vaginalis G3]
         (588 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001349033  PfEMP1  (Establishment)  [Plasmodium falciparum]         30   0.42 

>EAY09982.1 on XP_001349033  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2064

 Score = 30.0 bits (66), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 3/63 (4%)

Query: 214  LKQIDDESAARPTYPRVTAAEFDDLFDENGRLKDGDSFCKRLFDSGIDPEVLPRALPFVF 273
            L   DDE+  R  + +  AAE   L+       D D+   +L DSGI P    R++ + F
Sbjct: 1269 LDDKDDENKLREAFIKSAAAETFVLWQNYNSKNDNDA---QLLDSGIIPPEFLRSMFYTF 1325

Query: 274  GVF 276
            G +
Sbjct: 1326 GDY 1328




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09984.1 RanBP1 domain containing protein [Trichomonas
vaginalis G3]
         (232 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351514  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   2.5  
XP_001351515  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   2.7  
AAF14193  SBP3  (Others)  [Babesia bovis]                              25   4.8  
XP_829783  VSG  (Establishment)  [Trypanosoma brucei]                  24   8.7  

>EAY09984.1 on XP_001351514  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2201

 Score = 25.8 bits (55), Expect = 2.5,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 10/64 (15%)

Query: 113  LQNTDNSEENENILFNNTAKLYAFVVDENEKGRYS---------QRFTGTLHLNECSDFS 163
            L+N+ NSEE+ N LF ++  L+  V D+N + ++          + F   + LN+ + F 
Sbjct: 1415 LENSKNSEESNNSLFKDSY-LFKSVRDQNWECKFENENKDVCKLKNFNDKIDLNQYTTFK 1473

Query: 164  RIVM 167
             +++
Sbjct: 1474 VLLI 1477



>EAY09984.1 on XP_001351515  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2181

 Score = 25.8 bits (55), Expect = 2.7,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 10/64 (15%)

Query: 113  LQNTDNSEENENILFNNTAKLYAFVVDENEKGRYS---------QRFTGTLHLNECSDFS 163
            L+N+ NSEE+ N LF ++  L+  V D+N + ++          + F   + LN+ + F 
Sbjct: 1395 LENSKNSEESNNSLFKDSY-LFKSVRDQNWECKFENENKDVCKLKNFNDKIDLNQYTTFK 1453

Query: 164  RIVM 167
             +++
Sbjct: 1454 VLLI 1457



>EAY09984.1 on AAF14193  SBP3  (Others)  [Babesia bovis]
          Length = 1089

 Score = 25.0 bits (53), Expect = 4.8,   Method: Composition-based stats.
 Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 4/98 (4%)

Query: 90   IAEEKINESEEKEAIPIEEKEFELQNTDNSEENENILFNNTAKLYAFVVD--ENEKGRYS 147
            ++E  + + EE+E  P +EKE EL      E+   +     AK  A        +  + +
Sbjct: 948  VSEYLLRKEEEEETCPCKEKEAELARRKAREDLNGMSAEEVAKKAAIEAKHVHMQNVKDN 1007

Query: 148  QRFTGT-LHLNECSDFSRIVM-RNTLGKVCLNCRLFKQ 183
              ++G  L L+       +V   N  G+VCL+ R F +
Sbjct: 1008 SYYSGVPLTLSNVVHKEGVVWDSNGTGEVCLDYRKFDK 1045



>EAY09984.1 on XP_829783  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 489

 Score = 23.9 bits (50), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 10/35 (28%), Positives = 19/35 (54%)

Query: 55  LIKFTFGTGMTFETSSTITVFEETINFSQKIQPKK 89
           LIK T+G   TF +  T  ++++   + ++ Q  K
Sbjct: 338 LIKSTYGDATTFGSRYTTGLYDKQTKYKKETQDSK 372




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09987.1 SPRY domain containing protein [Trichomonas
vaginalis G3]
         (280 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001610196  variant erythrocyte surface antigen-1, alpha subun...    28   0.52 
XP_001608785  variant erythrocyte surface antigen-1, alpha subun...    28   0.68 
XP_001610721  variant erythrocyte surface antigen-1, alpha subun...    26   2.7  
XP_001609565  variant erythrocyte surface antigen-1, alpha subun...    26   3.6  
XP_001609540  variant erythrocyte surface antigen-1, alpha subun...    25   5.3  
XP_966160  PfEMP1  (Establishment)  [Plasmodium falciparum]            25   5.6  

>EAY09987.1 on XP_001610196  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1330

 Score = 28.5 bits (62), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 15/53 (28%), Positives = 23/53 (43%)

Query: 223 APGPAWTPAANIPDEPQKQKYTLSQMLDVMRNGTESLRTKEMFAATFAVLTPI 275
           AP  A+TP A++ D P   K  +  +L V     + L   E      A +T +
Sbjct: 2   APASAFTPKASLTDAPTNLKEAIDWVLRVTGRDGKELNKDECICGLAAAVTDL 54



>EAY09987.1 on XP_001608785  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 954

 Score = 28.1 bits (61), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 9/29 (31%), Positives = 21/29 (72%)

Query: 243 YTLSQMLDVMRNGTESLRTKEMFAATFAV 271
           + + +++D ++ G E+L++KE+  A FA+
Sbjct: 777 HDIRKVVDALKKGVEALKSKEVEDAKFAI 805



>EAY09987.1 on XP_001610721  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1331

 Score = 26.2 bits (56), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 223 APGPAWTPAANIPDEPQKQKYTLSQMLDVM-RNGTESLRTKEMFAATFAVLTPI 275
           AP  +W P  ++ + P   K  +  +L V  R+G E  +  E      A +T +
Sbjct: 2   APNSSWKPYTSLTEAPTNLKEAIDWVLRVTGRDGKELNKDTECICGLAAAVTDL 55



>EAY09987.1 on XP_001609565  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1341

 Score = 25.8 bits (55), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 15/58 (25%), Positives = 26/58 (44%)

Query: 223 APGPAWTPAANIPDEPQKQKYTLSQMLDVMRNGTESLRTKEMFAATFAVLTPIQDMPI 280
           AP  A+TP A++ D P   K  +  +L V      S + + +     AV   +Q + +
Sbjct: 2   APNSAFTPKASLTDAPTNLKEAIDWVLRVTGRDGRSNKDECICGLASAVTDLLQSVQL 59



>EAY09987.1 on XP_001609540  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1349

 Score = 25.4 bits (54), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 223 APGPAWTPAANIPDEPQKQKYTLSQMLDVMRNGTESLRTKEMFAATFAVLTPI 275
           AP   +TP A++ D P   K  +  +L V   G +  +  E      A +T +
Sbjct: 2   APASTFTPKASLTDAPTNLKEAIDWVLRV--TGKDGKKNDECICGLAAAVTDL 52



>EAY09987.1 on XP_966160  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2394

 Score = 25.0 bits (53), Expect = 5.6,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 26/60 (43%)

Query: 139  CSKHQKPEEYDPGVVPFQGFNVGDFVGFGFTLGTTPETTTLEVWVNGMYRGVIFRNIDPT 198
            C K+ K  E      P  G NV + V   F   TTP     + ++NG  +   ++ + P+
Sbjct: 1185 CKKNTKAPEKKKEETPPAGPNVCEIVDKLFEDTTTPHAACQQKYINGHEKFPNWKCVTPS 1244




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09989.1 hypothetical protein TVAG_127980 [Trichomonas
vaginalis G3]
         (210 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAC97385  P270  (Establishment)  [Trichomonas vaginalis]               26   1.7  

>EAY09989.1 on AAC97385  P270  (Establishment)  [Trichomonas vaginalis]
          Length = 255

 Score = 25.8 bits (55), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 13/35 (37%), Positives = 20/35 (57%)

Query: 137 FPDNSLIVPIVREIQINNAWDIISFNFGTKFLFEY 171
           F D++ I     +I+ +NA DII    G+K+ F Y
Sbjct: 147 FDDDATIAQPQYQIEKDNAVDIILEKKGSKYTFTY 181




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY09991.1 DnaJ domain containing protein [Trichomonas
vaginalis G3]
         (147 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001348165  RESA  (Others)  [plasmodium falciparum]                  33   0.007
XP_650156  CP1  (Cysteine protease)  [Entamoeba histolytica]           26   0.87 

>EAY09991.1 on XP_001348165  RESA  (Others)  [plasmodium falciparum]
          Length = 1085

 Score = 32.7 bits (73), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 2/52 (3%)

Query: 5   YQLLGVPRDADSKTIKKAYHKLAMELHPDKVKDQTQEVEIKFQKIIEAYTVL 56
           Y +LGV  +AD   I + Y KLA   +P +    T  V   F+K+ EAY VL
Sbjct: 525 YDILGVGVNADMNEITERYFKLAENYYPYQRSGST--VFHNFRKVNEAYQVL 574



>EAY09991.1 on XP_650156  CP1  (Cysteine protease)  [Entamoeba histolytica]
          Length = 315

 Score = 26.2 bits (56), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)

Query: 76  NQRFNSMDSDRKRMIEKLNA-MENENNKKKAVNLDI 110
           N+ F +++S R+R I  +NA +  ENN+K+   L +
Sbjct: 24  NKHFTAVESLRRRAIFNMNARIVAENNRKETFKLSV 59




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10009.1 hypothetical protein TVAG_128180 [Trichomonas
vaginalis G3]
         (117 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_803409  VSG  (Establishment)  [Trypanosoma brucei]                  24   2.2  
XP_001349512  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   4.2  
XP_001347691  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   6.9  
XP_818396   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   8.0  

>EAY10009.1 on XP_803409  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 501

 Score = 24.3 bits (51), Expect = 2.2,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 2/75 (2%)

Query: 29  PTVDNTSCKVTDNKHVFVDNAFFKDFIN-EGVIRITN-ATVDTKVLVSTSSFFKCSSNEK 86
           P VD T C       V  +  F K  IN +G +++T   T D      T   F+ +S   
Sbjct: 170 PAVDTTGCATLTATEVSTETGFNKGDINDDGFVKLTALTTTDGAGQTGTCGVFETASGSG 229

Query: 87  DGGSILMKSSGSFVQ 101
              + +  S+G+ V 
Sbjct: 230 STTAGIQISAGAKVH 244



>EAY10009.1 on XP_001349512  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2980

 Score = 23.5 bits (49), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 12/52 (23%), Positives = 24/52 (46%), Gaps = 5/52 (9%)

Query: 18  IWKRFYDNASIPTVDNTSCKVTDNKHVFVDNAFFKDFINEGVIRITNATVDT 69
           IW+ +Y+N+ I       C++T + H    + +   F     + + N  +DT
Sbjct: 546 IWQCYYENSEI-----NKCQMTPSSHKVPKHGYIMSFFAFFDLWVKNLLIDT 592



>EAY10009.1 on XP_001347691  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2182

 Score = 23.1 bits (48), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 5/36 (13%)

Query: 20   KRFYDNASIPTVDNTSCKVTDN-----KHVFVDNAF 50
            KR   +  IP  D  S K+TDN     KH F+ N  
Sbjct: 1872 KRDIPSDDIPNNDTPSSKITDNEWNTLKHDFISNML 1907



>EAY10009.1 on XP_818396   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1044

 Score = 22.7 bits (47), Expect = 8.0,   Method: Composition-based stats.
 Identities = 10/21 (47%), Positives = 15/21 (71%)

Query: 89  GSILMKSSGSFVQYKVCSYES 109
           G +LM +SGSF+  ++  YES
Sbjct: 285 GKLLMVTSGSFIPQQLRVYES 305




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10014.1 CAMK family protein kinase [Trichomonas
vaginalis G3]
         (386 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    63   7e-12

>EAY10014.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 62.8 bits (151), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 74/145 (51%), Gaps = 8/145 (5%)

Query: 74  SPRIVQLFDLLKDTMNYY--IVTELCTGGDMFQQILQNKKIPEERAKIYAKQLLEAISYI 131
            P I++L D++KD  +    ++ E     D F+ +     I  +  K Y  QLL+A++Y 
Sbjct: 107 GPNIIKLLDIVKDPQSRTPSLIFEHVNNTD-FKTLYPTLTI--QDIKYYIYQLLKAMNYC 163

Query: 132 HKLNVCHRDLKPENILLDNNGDI-KLSDFGFSKFIDGLTHTS--CGSYVYAAPEILEGTD 188
           H   + HRD+KP N+++D+   I +L D+G ++F       S    +  Y  PE+L    
Sbjct: 164 HSQGIMHRDIKPHNVMIDHEKKILRLIDWGLAEFYHPEQEYSVRVATRYYKGPELLVDMR 223

Query: 189 YDPKKSDIWAVGVIIYAMVTGQLPW 213
           Y     DIW++G ++  ++  + P+
Sbjct: 224 YYDYSLDIWSIGCMLAGIIFKKEPF 248




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10029.1 hypothetical protein TVAG_329160 [Trichomonas
vaginalis G3]
         (582 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351563  PfEMP1  (Establishment)  [Plasmodium falciparum]         31   0.28 
XP_805786   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.7  
XP_804241   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   6.2  

>EAY10029.1 on XP_001351563  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2149

 Score = 30.8 bits (68), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 12/27 (44%), Positives = 19/27 (70%)

Query: 63  KEIVLQFLLEHKMDLTEKCINSESKQQ 89
           KE ++ FLLEH+ +  +KC NS + Q+
Sbjct: 716 KETIIDFLLEHEGEDAKKCTNSHNDQE 742



>EAY10029.1 on XP_805786   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 581

 Score = 27.3 bits (59), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)

Query: 371 SRNSYASKPSTHSRHSTVSIEGASTQERDAEPVSRQLNASKR 412
           SR +    P TH+R       G   + R++EP  R+LN S+R
Sbjct: 3   SRVAAVKAPRTHNRRRVTGSSGRRREGRESEP--RRLNMSRR 42



>EAY10029.1 on XP_804241   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 765

 Score = 26.2 bits (56), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)

Query: 371 SRNSYASKPSTHSRHSTVSIEGASTQERDAEPVSRQLNASKRSKKST 417
           SR +    P TH+R       G   + R++EP  ++LN S+R   ST
Sbjct: 3   SRVAAVKAPRTHNRRRVTGSSGRRREGRESEP--QRLNMSRRVFAST 47




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10030.1 hypothetical protein TVAG_329170 [Trichomonas
vaginalis G3]
         (88 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_805718   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   1.0  
XP_818394   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   1.5  
XP_820141   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   1.8  
XP_806381   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   2.8  
XP_813123   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   4.2  

>EAY10030.1 on XP_805718   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 482

 Score = 24.6 bits (52), Expect = 1.0,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 26/67 (38%)

Query: 3   CCNSAEEQALAPQNLTSTVTVSNIPNEQIYENKFAPQAEGHDKVPLLNAVSTQNITFSDD 62
           CC  A    +    + ST + S +      E   +   EG  +V L    +TQ +     
Sbjct: 57  CCGGAATAEVGSNAVASTPSGSTLTGVIAGEGSTSGGVEGLQRVDLFVPQTTQVLPKKGT 116

Query: 63  TDSSSVD 69
           TDSS  D
Sbjct: 117 TDSSGRD 123



>EAY10030.1 on XP_818394   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1059

 Score = 24.3 bits (51), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 31/77 (40%)

Query: 12  LAPQNLTSTVTVSNIPNEQIYENKFAPQAEGHDKVPLLNAVSTQNITFSDDTDSSSVDQD 71
           L P   +STV   +   E     + A  +   D   L    ++Q  T ++D +S   D +
Sbjct: 778 LVPAVSSSTVAGGSSVPEPAIATEIAGNSRSEDNAQLSEGETSQQTTLNEDNESMQRDSE 837

Query: 72  MIKNLLDQVKLSDDDDY 88
           M    L   + ++  D+
Sbjct: 838 MQTQELQSEESTEATDF 854



>EAY10030.1 on XP_820141   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 925

 Score = 23.9 bits (50), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 12/38 (31%), Positives = 16/38 (42%)

Query: 1  MGCCNSAEEQALAPQNLTSTVTVSNIPNEQIYENKFAP 38
          M CC S E   +A Q   ST     I   +  ++  AP
Sbjct: 54 MVCCGSGEAAGVAGQPAVSTFEWRGINESETVDSLGAP 91



>EAY10030.1 on XP_806381   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1045

 Score = 23.1 bits (48), Expect = 2.8,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 32/77 (41%)

Query: 12  LAPQNLTSTVTVSNIPNEQIYENKFAPQAEGHDKVPLLNAVSTQNITFSDDTDSSSVDQD 71
           L P   +STV   +   E     + A  +   D   L    ++   T ++D++S   D D
Sbjct: 764 LVPAAPSSTVAGGSSVPEPAIAAESAENSRSDDNAQLSEDKTSPQATMNEDSESMQRDSD 823

Query: 72  MIKNLLDQVKLSDDDDY 88
           + K  L   + +D  D+
Sbjct: 824 VQKQDLQSAESADVTDF 840



>EAY10030.1 on XP_813123   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1048

 Score = 22.7 bits (47), Expect = 4.2,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 25/61 (40%)

Query: 12  LAPQNLTSTVTVSNIPNEQIYENKFAPQAEGHDKVPLLNAVSTQNITFSDDTDSSSVDQD 71
           L P   +STV   +   E     + A  +   D   L    ++Q  T ++D +S   D +
Sbjct: 767 LVPAVSSSTVAGGSSVPEPATATEIAGNSRSDDNAQLSEGETSQQATLNEDNESMQRDSE 826

Query: 72  M 72
           M
Sbjct: 827 M 827




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10031.1 hypothetical protein TVAG_329180 [Trichomonas
vaginalis G3]
         (921 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_819907   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   3.9  
XP_001349533  PfEMP3  (Establishment)  [Plasmodium falciparum]         28   4.3  
XP_966305  PfEMP1  (Establishment)  [Plasmodium falciparum]            27   8.4  
XP_816751   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   8.5  

>EAY10031.1 on XP_819907   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 943

 Score = 27.7 bits (60), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 14/31 (45%), Positives = 18/31 (58%)

Query: 830 KCRSGTIRRPAEILKKKKKDDKEKEHKKTKI 860
           K + GT+  PAE  KK+K  D EKE K   +
Sbjct: 250 KMKDGTLVFPAEAKKKQKDADTEKEGKTVSL 280



>EAY10031.1 on XP_001349533  PfEMP3  (Establishment)  [Plasmodium falciparum]
          Length = 2441

 Score = 27.7 bits (60), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 106/492 (21%), Positives = 212/492 (43%), Gaps = 113/492 (22%)

Query: 393  TIDEITQGGGIKKSPS--KLGGGIRSSPS-GKITLLGDGSGIRSSPSGKIALLGRNGIRN 449
            T +E  Q  G+K +PS  +   G++++PS G+       +G++++P+ +       G++N
Sbjct: 1345 TPNERQQNTGLKNTPSEGQQNTGLKNTPSEGQ-----QNTGLKNTPNERQQ---NTGLKN 1396

Query: 450  SPS-GKISLLGGGNGIRGSP-SGKITLLGDGIRSSPS-GRIALLGEGGGIKSSPSGRIAL 506
            +PS G+ +      G++ +P  G+      G++++PS G+     +  G+K++P+ R   
Sbjct: 1397 TPSEGQQNT-----GLKNTPIEGQQNT---GLKNTPSEGQ-----QNTGLKNTPNERQQN 1443

Query: 507  LG---------DGGGIKSSPS-GKITLLGDGIRSSPSGRIALLGDGGGIKSSPSGRIALL 556
             G            G+K++PS G+      G++++P+ R        G+K++P+ R    
Sbjct: 1444 TGLKNAANKGQQNTGLKNTPSKGQQNT---GLKNTPNERQQ----NTGLKNTPNERQQNT 1496

Query: 557  G---------DGGGIKSSPSGR--------IALLGDGGGGIRSSPSGRITLLG------- 592
            G             +K++P+ R         A  G    G++++P+ R    G       
Sbjct: 1497 GLKNTPSEGQQNNDLKNTPNERQQNTGLKNTASKGQQNTGLKNAPNERQQNTGLKNTPSE 1556

Query: 593  ----DGIRPSPSK-NFGDGIRSSPSGRITLLG---------EGNGIRSSPSKLLLEGGGG 638
                 G++ +PS+     G++++P+ R    G         +  G++++P++     G  
Sbjct: 1557 GQQNTGLKNTPSEGQQNTGLKNTPNERQQNTGLKNTASKGQQNTGLKNAPNERQQNTGLK 1616

Query: 639  IKPSPSRQFALLRDDITPNGRIVLLTPEIPGNSNGGGGIRPSPSKQISFL--PPNESPKG 696
              PS  +Q   L++  +             G  N G    PS  +Q + L   PNE  + 
Sbjct: 1617 NTPSEGQQNTGLKNSASK------------GQQNTGLKNTPSEGQQNNDLKNAPNERQQN 1664

Query: 697  GGGIKSSPSRIILLNSSPPQNTDSIIAPSPGIRSYPS---RNNSLLLNPSPRSPLLDGIQ 753
             G +K++PS      ++  +NT S    + G+++ PS   +N  L   P+ R     G++
Sbjct: 1665 TG-LKNTPSEGQQ--NTGLKNTPSEGQQNTGLKNTPSGGQQNTGLKNTPNERQQNT-GLK 1720

Query: 754  GIDANDSQAVII---PMENE-----KKDVKKKKSNTKSKSKPKS-KKSVKKPKSPEESSD 804
               +   Q   +   P E +     K    K + NT  K+ P   +++     +P E   
Sbjct: 1721 NTPSEGQQNTGLKNTPNERQQNTGLKNAANKGQQNTGLKNTPNEGQQNTGLKNTPSEGQQ 1780

Query: 805  PANGRQQSPSKG 816
               G + +PS+G
Sbjct: 1781 NT-GLKNTPSEG 1791



>EAY10031.1 on XP_966305  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3954

 Score = 26.6 bits (57), Expect = 8.4,   Method: Composition-based stats.
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)

Query: 840  AEILKKKKKDDKEKEHKKTKISQGDQGMSLSRNNNLAQS 878
            A+ LKK  KDD  K H+  K S  D G S+ + N++ +S
Sbjct: 3184 AKRLKKVYKDDNSKLHQAMKYSFSDIG-SVVKGNDMMES 3221



>EAY10031.1 on XP_816751   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1042

 Score = 26.6 bits (57), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 13/101 (12%)

Query: 576 GGGGIRSSPSGRIT-------LLGDGIRPSPS-----KNFGDGIRSSPSGRITLLGEGNG 623
           GG G  ++P  ++T        + DG+ P  +     K F     +S SG    + E N 
Sbjct: 178 GGYGTSTTPLTKVTGDGYWRPRMADGVVPHGTDDEEKKEFEWNQVASTSGVPYDIWEDNS 237

Query: 624 IRSSPSKLLLEGGG-GIKPSPSRQFALLRDDITPNGRIVLL 663
                 K  L GGG GIK     ++ L    +  NG++V L
Sbjct: 238 TNRDRFKQFLGGGGAGIKMEDDGRYVLPIQALKNNGKVVSL 278




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10032.1 hypothetical protein TVAG_329190 [Trichomonas
vaginalis G3]
         (195 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609315  variant erythrocyte surface antigen-1, alpha subun...    27   0.61 
XP_829782  VSG  (Establishment)  [Trypanosoma brucei]                  25   2.5  
XP_001347691  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   3.8  
XP_805533   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   4.1  
XP_965999  PfEMP1  (Establishment)  [Plasmodium falciparum]            24   7.0  
XP_001350413  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   7.1  
XP_001352240  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   7.4  
XP_809996   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   8.4  
XP_808396   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   8.7  

>EAY10032.1 on XP_001609315  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1338

 Score = 27.3 bits (59), Expect = 0.61,   Method: Composition-based stats.
 Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 6/56 (10%)

Query: 10  QNLRDENANLSRVVEELREHKAAKENLEHKKEVKIED---VSITKAKMEYERLLNE 62
           + L+D    +  VV +L     A+E LE K E K+ +   V++TKAK E E +++E
Sbjct: 688 KELKDLLEKIGEVVVQLGN---AQEALEGKAESKVIEGVKVALTKAKTELEGVVDE 740



>EAY10032.1 on XP_829782  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 497

 Score = 25.4 bits (54), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 10/70 (14%)

Query: 10  QNLRDENANLSRVVEELREHKAAKENLEHKKEVKIEDVS----ITKAKMEYERLLNEVPQ 65
           Q ++D+NA  +  V ++ + K  K +    KEVKIE ++    IT A      LL  +P+
Sbjct: 342 QAVKDDNAASTARVNQVNKLKVKKIDGGKPKEVKIETLTDPPEITTA------LLIAIPE 395

Query: 66  IRADYSKMMA 75
           ++A   + +A
Sbjct: 396 LKAKADRTVA 405



>EAY10032.1 on XP_001347691  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2182

 Score = 25.0 bits (53), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 12/41 (29%), Positives = 21/41 (51%)

Query: 19  LSRVVEELREHKAAKENLEHKKEVKIEDVSITKAKMEYERL 59
           L + +    E KA K N +  KE +     IT+ + E+E++
Sbjct: 669 LDKCINNSNESKACKNNKKCNKECECFQRWITQKQQEWEQI 709



>EAY10032.1 on XP_805533   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 794

 Score = 24.6 bits (52), Expect = 4.1,   Method: Composition-based stats.
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)

Query: 23  VEELREHKAAKENLEHKKEVK--IEDVSITKA 52
           VEE+RE  AAK N    ++V+  + +VS+  A
Sbjct: 742 VEEVREGGAAKRNTSRTEDVQFVVPEVSLNSA 773



>EAY10032.1 on XP_965999  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 1325

 Score = 24.3 bits (51), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 30/148 (20%), Positives = 67/148 (45%), Gaps = 17/148 (11%)

Query: 34  ENLEHKKEVKIEDVSITKAKMEYERLLNEVPQIRADYSKMMADKLKLSQDIENLNVKYNK 93
           E  +HK  V I DV   +  ++YE       + R +  K +++K    +  +N  V    
Sbjct: 707 EGRKHKSMVDITDVECKRLFIDYEEWF----RYRYNQWKGLSEKYIKIKKSKNSGVN--- 759

Query: 94  ELVPTYKTESELTLKYYSSIVTKLEELQVDGLDELKKLISAVQIMRDAVGGLQDEYDKIN 153
             +P+ +  +    K+ +  +  L +++    D  K + +  ++M++ +  ++ + D+  
Sbjct: 760 --IPSEECAASYVTKHCNGCICNLRDME----DIHKNINNQNELMKEMINIIKFDTDQYR 813

Query: 154 QFIQINENHPPLEINP--IQVASEQVKD 179
             +Q   N   +EINP  ++ A +  KD
Sbjct: 814 TQLQNISN--SMEINPKSVKTAVDTTKD 839



>EAY10032.1 on XP_001350413  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2860

 Score = 24.3 bits (51), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 5/68 (7%)

Query: 12   LRDENANLSRVVEELREHKAAKENLEHKKEVKIEDVSITKAKMEYERLLNEVPQIRADYS 71
             R+    L ++++E +E++  +EN++ KK+ K ED      K+  E L     Q +    
Sbjct: 1482 CRERKEKLDKLLKECKEYECNEENMDEKKK-KCEDA----CKVYEEWLQGWKDQYKKQSK 1536

Query: 72   KMMADKLK 79
            K   DK K
Sbjct: 1537 KFTTDKEK 1544



>EAY10032.1 on XP_001352240  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 1315

 Score = 23.9 bits (50), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 30/148 (20%), Positives = 67/148 (45%), Gaps = 17/148 (11%)

Query: 34  ENLEHKKEVKIEDVSITKAKMEYERLLNEVPQIRADYSKMMADKLKLSQDIENLNVKYNK 93
           E  +HK  V I DV   +  ++YE       + R +  K +++K    +  +N  V    
Sbjct: 697 EGRKHKSMVDITDVECKRLFIDYEEWF----RYRYNQWKGLSEKYIKIKKSKNSGVN--- 749

Query: 94  ELVPTYKTESELTLKYYSSIVTKLEELQVDGLDELKKLISAVQIMRDAVGGLQDEYDKIN 153
             +P+ +  +    K+ +  +  L +++    D  K + +  ++M++ +  ++ + D+  
Sbjct: 750 --IPSEECAASYVTKHCNGCICNLRDME----DIHKNINNQNELMKEMINIIKFDTDQYR 803

Query: 154 QFIQINENHPPLEINP--IQVASEQVKD 179
             +Q   N   +EINP  ++ A +  KD
Sbjct: 804 TQLQNISN--SMEINPKSVKTAVDTTKD 829



>EAY10032.1 on XP_809996   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 787

 Score = 23.9 bits (50), Expect = 8.4,   Method: Composition-based stats.
 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)

Query: 20  SRVVEELREHKAAKENLEHKKEVK--IEDVSITKA 52
           S  VEE+ E  AAK+N    ++V+  + +VS+  A
Sbjct: 734 SHAVEEVSEGGAAKKNTSRTEDVQFFVPEVSLNSA 768



>EAY10032.1 on XP_808396   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 786

 Score = 23.9 bits (50), Expect = 8.7,   Method: Composition-based stats.
 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)

Query: 20  SRVVEELREHKAAKENLEHKKEVK--IEDVSITKA 52
           S  VEE+ E  AAK+N    ++V+  + +VS+  A
Sbjct: 733 SHAVEEVSEGGAAKKNTSRTEDVQFFVPEVSLNSA 767




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10037.1 hypothetical protein TVAG_329240 [Trichomonas
vaginalis G3]
         (1240 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609033  variant erythrocyte surface antigen-1, alpha subun...    30   0.97 
XP_001349030  PfEMP1  (Establishment)  [Plasmodium falciparum]         30   1.3  
AAL38221  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   28   3.0  
AAL38222  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   28   3.0  
AAL38220  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   28   3.0  
AAL38219  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   28   3.1  
XP_803378  VSG  (Establishment)  [Trypanosoma brucei]                  28   3.1  
AAL38218  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   28   3.3  
XP_001347692  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   3.4  
XP_001351435  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   7.2  

>EAY10037.1 on XP_001609033  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1270

 Score = 30.0 bits (66), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 12/87 (13%)

Query: 155 LASIQQVNSEMGETLAAFQAKLQELKSENKAL---RASLKKASSQLDLAQGNED--IIQP 209
           L +I +V  ++G    A      E K+ENKA+   + +L+KA  +L+ A+G ED  ++  
Sbjct: 634 LEAIGEVVVQLGNAQEAL-----EKKAENKAIEGVKGALEKAKKELEGAKGEEDDGVLTA 688

Query: 210 YTQKIEE--LQRKAQLDLENYQEDIEE 234
              K+EE  ++   Q +L N +E I+E
Sbjct: 689 LYAKLEEEGVEWHGQEELVNAREKIKE 715



>EAY10037.1 on XP_001349030  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2215

 Score = 29.6 bits (65), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 9/62 (14%)

Query: 713  EFCE--------VMKDGPLSTAEGQRL-KSEIEEAKLELKNTKQKYEEEIEKLQKEKKEF 763
            E+CE        V++D   S A+  RL K+ IE+ K E +  K+ YEE+    + E+K+ 
Sbjct: 1259 EYCEEIFSKKYNVLQDLSSSCAKPCRLYKTWIEKKKTEYEKQKKAYEEQKSNYENEQKDK 1318

Query: 764  CQ 765
            CQ
Sbjct: 1319 CQ 1320



>EAY10037.1 on AAL38221  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2965

 Score = 28.5 bits (62), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 20/75 (26%), Positives = 47/75 (62%), Gaps = 7/75 (9%)

Query: 207  IQPYTQKIEELQRKAQLDLENYQEDIEERDSKIESLKKQVQTLRNQLQYDQDVQSDNSKQ 266
            +QPYTQ I  ++     D++N    I+ +++K E ++K ++ +++  Q ++++ +DN  +
Sbjct: 2505 LQPYTQLINMIK-----DIDNVF--IKIQNNKFEQIQKYIEIIKSLEQLNKNINTDNLNK 2557

Query: 267  LQETQMTLLQEKLQM 281
            L++TQ  L+  + +M
Sbjct: 2558 LKDTQNKLINIETEM 2572



>EAY10037.1 on AAL38222  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2976

 Score = 28.5 bits (62), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 20/75 (26%), Positives = 47/75 (62%), Gaps = 7/75 (9%)

Query: 207  IQPYTQKIEELQRKAQLDLENYQEDIEERDSKIESLKKQVQTLRNQLQYDQDVQSDNSKQ 266
            +QPYTQ I  ++     D++N    I+ +++K E ++K ++ +++  Q ++++ +DN  +
Sbjct: 2512 LQPYTQLINMIK-----DIDNVF--IKIQNNKFEQIQKYIEIIKSLEQLNKNINTDNLNK 2564

Query: 267  LQETQMTLLQEKLQM 281
            L++TQ  L+  + +M
Sbjct: 2565 LKDTQNKLINIETEM 2579



>EAY10037.1 on AAL38220  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2957

 Score = 28.5 bits (62), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 20/75 (26%), Positives = 47/75 (62%), Gaps = 7/75 (9%)

Query: 207  IQPYTQKIEELQRKAQLDLENYQEDIEERDSKIESLKKQVQTLRNQLQYDQDVQSDNSKQ 266
            +QPYTQ I  ++     D++N    I+ +++K E ++K ++ +++  Q ++++ +DN  +
Sbjct: 2499 LQPYTQLINMIK-----DIDNVF--IKIQNNKFEQIQKYIEIIKSLEQLNKNINTDNLNK 2551

Query: 267  LQETQMTLLQEKLQM 281
            L++TQ  L+  + +M
Sbjct: 2552 LKDTQNKLINIETEM 2566



>EAY10037.1 on AAL38219  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2969

 Score = 28.5 bits (62), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 20/75 (26%), Positives = 47/75 (62%), Gaps = 7/75 (9%)

Query: 207  IQPYTQKIEELQRKAQLDLENYQEDIEERDSKIESLKKQVQTLRNQLQYDQDVQSDNSKQ 266
            +QPYTQ I  ++     D++N    I+ +++K E ++K ++ +++  Q ++++ +DN  +
Sbjct: 2501 LQPYTQLINMIK-----DIDNVF--IKIQNNKFEQIQKYIEIIKSLEQLNKNINTDNLNK 2553

Query: 267  LQETQMTLLQEKLQM 281
            L++TQ  L+  + +M
Sbjct: 2554 LKDTQNKLINIETEM 2568



>EAY10037.1 on XP_803378  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 506

 Score = 28.1 bits (61), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 4/59 (6%)

Query: 410 ESLESLEEVLKT--QRQEITSLTKQRTELISSLISAGQAIEKAEKLTSEKNQIISNLKM 466
           + LE++E  L+T  Q Q+I    + + E +  L+ A  A + AEKLT+   Q  SN K+
Sbjct: 341 DKLETVETSLRTRQQNQDIQKQAQTKIETLKQLVKA--AAKHAEKLTAPTTQHHSNPKL 397



>EAY10037.1 on AAL38218  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2977

 Score = 28.5 bits (62), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 20/75 (26%), Positives = 47/75 (62%), Gaps = 7/75 (9%)

Query: 207  IQPYTQKIEELQRKAQLDLENYQEDIEERDSKIESLKKQVQTLRNQLQYDQDVQSDNSKQ 266
            +QPYTQ I  ++     D++N    I+ +++K E ++K ++ +++  Q ++++ +DN  +
Sbjct: 2509 LQPYTQLINMIK-----DIDNVF--IKIQNNKFEQIQKYIEIIKSLEQLNKNINTDNLNK 2561

Query: 267  LQETQMTLLQEKLQM 281
            L++TQ  L+  + +M
Sbjct: 2562 LKDTQNKLINIETEM 2576



>EAY10037.1 on XP_001347692  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2994

 Score = 28.5 bits (62), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 4/55 (7%)

Query: 620 VDEDKIDQTPFRELFTLFSCLIQVNVMLMSSSDELRKVAAKFAAQKTFNMELKSK 674
           VDED +   P R+      C+I +     ++SD+LR+   K AA +T+ +  K K
Sbjct: 898 VDEDGVYMPPRRQKL----CVINLEHFKENTSDDLREAFIKCAAAETYLLWQKYK 948



>EAY10037.1 on XP_001351435  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2209

 Score = 27.3 bits (59), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 5/70 (7%)

Query: 109  NIQLSTQIESFLAMLSSKTGEDIQSLKDASLVISNIIAQSGSTSDSLASIQQVNSEMGET 168
            +  L + +E+FL  + +  GED    K   ++  ++  QS   S ++AS Q+ N E  + 
Sbjct: 1551 DFNLRSCLETFLVQIGAAYGED----KFKKVIKLSVFDQSCGCS-AIASSQKKNGEYKDA 1605

Query: 169  LAAFQAKLQE 178
            +     KL+E
Sbjct: 1606 IECMLKKLEE 1615




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10038.1 Ser/Thr protein phosphatase, putative
[Trichomonas vaginalis G3]
         (423 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10042.1 TBC domain containing protein [Trichomonas
vaginalis G3]
         (385 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001347691  PfEMP1  (Establishment)  [Plasmodium falciparum]         29   0.45 
XP_818893   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.6  
ABR92030  MSA-1  (Invasion)  [Babesia bovis]                           27   1.8  
XP_818896   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.2  
XP_966305  PfEMP1  (Establishment)  [Plasmodium falciparum]            27   3.2  
AAV98582  CP4  (Cysteine protease)  [Trichomonas vaginalis]            25   8.3  

>EAY10042.1 on XP_001347691  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2182

 Score = 29.3 bits (64), Expect = 0.45,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 24/50 (48%)

Query: 206 KENIDEVDEKTLQEVEADCFWCFSKLLDGLQDLYTKDQPGLYKMLESLQN 255
           KE ++E  +K  Q++  D      K    L+D Y KD P  Y++ E   N
Sbjct: 217 KEKLEENFKKYFQQIHEDVTSTSGKNRKALRDRYHKDGPDYYQLREDWWN 266



>EAY10042.1 on XP_818893   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 956

 Score = 27.3 bits (59), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 3/85 (3%)

Query: 201 RDLAMKENIDEVDEKTLQEVEADCFWCFSKLLDGLQDLYTKDQPGLYKMLESLQNIVDRV 260
           RD+ ++E +  +   +L +V  D F     L  G +D       G+    E L+   +  
Sbjct: 83  RDVKVEETVSSLRVPSLLKVNGDVFAVAEALCTGKKDTGEGSFTGIAS--EVLELTGENP 140

Query: 261 APELSKHIMKEEIQYQEFAFRWVNC 285
             EL K+ +K ++  +E  F   NC
Sbjct: 141 KEELGKNKLKTQV-LEECTFEGGNC 164



>EAY10042.1 on ABR92030  MSA-1  (Invasion)  [Babesia bovis]
          Length = 328

 Score = 26.9 bits (58), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 10/27 (37%), Positives = 19/27 (70%)

Query: 45 STNLKRELQIEQLLQEPIIDLEKIRNM 71
          S N K  LQ +Q +++ +I++ K+R+M
Sbjct: 71 SANFKAALQNDQQIKDTVINIYKVRDM 97



>EAY10042.1 on XP_818896   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 725

 Score = 26.9 bits (58), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 3/85 (3%)

Query: 201 RDLAMKENIDEVDEKTLQEVEADCFWCFSKLLDGLQDLYTKDQPGLYKMLESLQNIVDRV 260
           RD+ ++E +  +   +L +V  D F     L  G +D       G+    E L+   +  
Sbjct: 83  RDVKVEETVSSLRVPSLLKVNGDVFAVAEALCTGKKDTGEGSFTGIAS--EVLELTGENP 140

Query: 261 APELSKHIMKEEIQYQEFAFRWVNC 285
             EL K+ +K ++  +E  F   NC
Sbjct: 141 KEELGKNKLKTQV-LEECTFEGGNC 164



>EAY10042.1 on XP_966305  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3954

 Score = 26.6 bits (57), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 10/27 (37%), Positives = 18/27 (66%)

Query: 251 ESLQNIVDRVAPELSKHIMKEEIQYQE 277
           ES++++ DR+  E+   + KE  QY+E
Sbjct: 14  ESVKDLFDRIGKEVHDQVEKEANQYKE 40



>EAY10042.1 on AAV98582  CP4  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 255

 Score = 24.6 bits (52), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 207 ENIDEVDEKTLQEVEADCFWCFSKLLDGLQDLYTKDQPGLY 247
           + +  + E+ L +    C+ C   L+D   D   K Q G +
Sbjct: 130 KTLQSLSEQNLVDCVTTCYGCNGGLMDAAYDYVVKHQSGKF 170




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10043.1 Coatomer epsilon subunit family protein
[Trichomonas vaginalis G3]
         (273 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001348153  MAEBL  (Adhesin)  [Plasmodium falciparum]                25   6.9  

>EAY10043.1 on XP_001348153  MAEBL  (Adhesin)  [Plasmodium falciparum]
          Length = 2054

 Score = 25.0 bits (53), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 14/62 (22%), Positives = 30/62 (48%), Gaps = 8/62 (12%)

Query: 212 QNASENFPNDD--------SIMINQAVALHRGTDYEKLKQQIQMVMSLNNSYTKSINDML 263
           +N  +N+PN++        S  +N    +H  + ++ + + IQM +  +N    + N  +
Sbjct: 504 KNEVKNYPNNNISYIQKVHSSFVNNRFNIHSDSSFKPIHKMIQMNIYTDNKLYNNNNQKI 563

Query: 264 KD 265
           KD
Sbjct: 564 KD 565




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10049.1 Cytochrome b5-like Heme/Steroid binding
domain containing protein [Trichomonas vaginalis G3]
         (102 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CAA05261  PfSUB1  (Proteases)  [Plasmodium falciparum]                 25   0.90 

>EAY10049.1 on CAA05261  PfSUB1  (Proteases)  [Plasmodium falciparum]
          Length = 689

 Score = 25.0 bits (53), Expect = 0.90,   Method: Composition-based stats.
 Identities = 7/27 (25%), Positives = 18/27 (66%)

Query: 51  GVVYDMTQYVCKHPGGASPLVQRADIS 77
           G+++ ++   C HP  ++P +++ D+S
Sbjct: 512 GILFFVSASNCSHPKSSTPDIRKCDLS 538




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10050.1 hypothetical protein TVAG_329370 [Trichomonas
vaginalis G3]
         (82 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    24   1.4  
XP_001350936  PfEMP1  (Establishment)  [Plasmodium falciparum]         22   4.9  
XP_802262   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   6.0  

>EAY10050.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
          annulata]
          Length = 348

 Score = 23.9 bits (50), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 9/18 (50%), Positives = 12/18 (66%)

Query: 15 GYELLEPIGEGGFSSVFK 32
           YE++  IG G FS VF+
Sbjct: 54 SYEIVRKIGRGKFSEVFE 71



>EAY10050.1 on XP_001350936  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2163

 Score = 22.3 bits (46), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 8/43 (18%)

Query: 33  VQDIRYNQLFVCKITKISHDKDSSINCNAQAQQYVNEVENLKL 75
            Q IR N+ FV        +KD    C      +VN ++N KL
Sbjct: 365 TQTIRGNEHFV--------EKDDCKGCQYSCAHFVNWIDNQKL 399



>EAY10050.1 on XP_802262   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 443

 Score = 21.9 bits (45), Expect = 6.0,   Method: Composition-based stats.
 Identities = 9/28 (32%), Positives = 16/28 (57%)

Query: 14  YGYELLEPIGEGGFSSVFKVQDIRYNQL 41
           YG++L EP     +S   +V ++R+  L
Sbjct: 364 YGFQLTEPSSRVSWSVNTRVNNVRHVSL 391




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10051.1 CAMK family protein kinase [Trichomonas
vaginalis G3]
         (236 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    57   9e-11
XP_829764  VSG  (Establishment)  [Trypanosoma brucei]                  25   4.3  

>EAY10051.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 57.4 bits (137), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 3/101 (2%)

Query: 23  LSGRKILTIVSQLAAAIEVCHSNSVAHHDIKPNNILIDEYNQV-KLADFGMST--HLEGI 79
           L+ + I   + QL  A+  CHS  + H DIKP+N++ID   ++ +L D+G++   H E  
Sbjct: 144 LTIQDIKYYIYQLLKAMNYCHSQGIMHRDIKPHNVMIDHEKKILRLIDWGLAEFYHPEQE 203

Query: 80  STKFMGSINLLAPEVINKSPYDPFSADIWSFGATILALIVS 120
            +  + +     PE++    Y  +S DIWS G  +  +I  
Sbjct: 204 YSVRVATRYYKGPELLVDMRYYDYSLDIWSIGCMLAGIIFK 244



>EAY10051.1 on XP_829764  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 434

 Score = 25.0 bits (53), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 14/86 (16%)

Query: 28  ILTIVSQLAAAIEVCHSNSVAHHDIKPN--NILIDEYNQVKLADFGMSTHLEGISTKFMG 85
           + TI  +L AA     +   A   + PN   +   E    +L D  +S H +  S  F+G
Sbjct: 90  LATIAEKLEAAHTALQTAKKAARTVIPNLGELKGAEQTVYELTDLELSAHADQASATFLG 149

Query: 86  S---------INLLAPEV---INKSP 99
           S         IN   P+    +NKSP
Sbjct: 150 SNGVHLIASPINRQEPKCTSELNKSP 175




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10056.1 hypothetical protein TVAG_329430 [Trichomonas
vaginalis G3]
         (386 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001611366  variant erythrocyte surface antigen-1, beta subuni...    27   2.8  
XP_001349031  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   5.5  
AAF14193  SBP3  (Others)  [Babesia bovis]                              26   5.8  
XP_820458   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   7.0  

>EAY10056.1 on XP_001611366  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 1173

 Score = 26.6 bits (57), Expect = 2.8,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 7/76 (9%)

Query: 250 KKETTPSNRTYRTMDKFIVHTPVIKLPKVPKEIKEDMTEPLPQKEEKTKTIPKSSKTSKK 309
           KKE TPS R  RT+ + +     +   +  KE+ + M       ++KT  +   +    K
Sbjct: 391 KKEETPSPRKPRTIREILYWLSALPYSQGYKELVDRM-------QDKTDQVTNGNSEQDK 443

Query: 310 TKKKSSKKKSTKKSKK 325
            K +   +KS K   K
Sbjct: 444 DKIQLYDEKSEKTELK 459



>EAY10056.1 on XP_001349031  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2275

 Score = 25.8 bits (55), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 23/113 (20%), Positives = 46/113 (40%), Gaps = 6/113 (5%)

Query: 156 DTIGFRFADNNKKHIRMLRGKEKFIFHEVKDVKSNI-RLSQSPKSPKTFDGEFNLSFTVP 214
           D   F+   + KK    ++ +  F   E+K  +  + +LS      +    EF       
Sbjct: 694 DCDCFKRWVDQKKEQEWMKIRNHFYTQEIKGFQGELFKLSHDDLLKQVLKEEF-----YK 748

Query: 215 EPKQHHHPRNSHHTIDPEVVSPRNYREKFIESKKDKKETTPSNRTYRTMDKFI 267
           E  +    +++ +++D E         K IES+++++    +N     MDK I
Sbjct: 749 EKSEDASAQDNQNSLDAEEAKELKQLSKIIESEENQEAGAGANGKKNIMDKLI 801



>EAY10056.1 on AAF14193  SBP3  (Others)  [Babesia bovis]
          Length = 1089

 Score = 25.8 bits (55), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 11/45 (24%), Positives = 27/45 (60%)

Query: 285 DMTEPLPQKEEKTKTIPKSSKTSKKTKKKSSKKKSTKKSKKIMPK 329
           D++E L +KEE+ +T P   K ++  ++K+ +  +   ++++  K
Sbjct: 947 DVSEYLLRKEEEEETCPCKEKEAELARRKAREDLNGMSAEEVAKK 991



>EAY10056.1 on XP_820458   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 923

 Score = 25.4 bits (54), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 5/49 (10%)

Query: 336 AQTLDERISFPRRKSPKQPKISINIPSMPPLPDSPIQN--YRPSSARRP 382
           A+ +  +I+ P+   P+ PK S   P  P L  SP+Q    + +SA +P
Sbjct: 727 AELVKNKITNPK---PEVPKTSTTSPLSPALSGSPVQGTVTQSNSAGQP 772




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10057.1 hypothetical protein TVAG_329440 [Trichomonas
vaginalis G3]
         (162 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_828106  VSG  (Establishment)  [Trypanosoma brucei]                  29   0.094
XP_001608795  variant erythrocyte surface antigen-1, alpha subun...    28   0.23 
XP_001609666  variant erythrocyte surface antigen-1, alpha subun...    28   0.26 
AAC48338   AP33-2  (Adhesin)  [Trichomonas vaginalis]                  24   3.4  
XP_821146   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   4.3  
XP_807743   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   9.9  

>EAY10057.1 on XP_828106  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 478

 Score = 29.3 bits (64), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 5/56 (8%)

Query: 81  KIAGDIVVKKLKGSPSS-----PITLNGIKPSPHRISLDDSDSGDKKIHAAGGNQN 131
           ++ G     KL G+ SS      IT NG     HRIS DD      K   A G+ N
Sbjct: 160 RLGGTECKLKLTGASSSGIQPTHITANGFPQLAHRISGDDEQHSSGKCTLASGHTN 215



>EAY10057.1 on XP_001608795  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1323

 Score = 28.1 bits (61), Expect = 0.23,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 6/54 (11%)

Query: 21  QRATPENSNSLPDEIKEIMATMLQFNPDSRAETEVLVHTMPGKQIAKLPPIGPE 74
           Q+A P+  N  P  I+EI+   L   P S+A  E+L H+   K++ K   + PE
Sbjct: 446 QKAPPKAENRTPKTIREIL-YWLSALPYSQAYPEILEHS---KEVLK--KVAPE 493



>EAY10057.1 on XP_001609666  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1269

 Score = 28.1 bits (61), Expect = 0.26,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 12/82 (14%)

Query: 21  QRATPENSNSLPDEIKEIMATMLQFNPDSRAETEVLVHTMPGKQIAKLPPIGPEIRSNSL 80
           Q+A P+  N  P  I+EI+   L   P S A  ++L H+       KL  + P+   N+ 
Sbjct: 399 QKALPKAENKTPKTIREIL-YWLSALPYSPAYPKILEHSKD-----KLKKVAPKNEKNTE 452

Query: 81  KIAGDIVVKKLKGSPSSPITLN 102
            ++       L+   S+PIT++
Sbjct: 453 TLS------FLQTGRSAPITVD 468



>EAY10057.1 on AAC48338   AP33-2  (Adhesin)  [Trichomonas vaginalis]
          Length = 255

 Score = 24.3 bits (51), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 2/27 (7%)

Query: 136 IPTKFTR--RVGIISRQGSLTTIQRFA 160
           IPT   R  ++GI+SR G+LT    +A
Sbjct: 150 IPTNIFRNGKIGIVSRSGTLTYEAAYA 176



>EAY10057.1 on XP_821146   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 911

 Score = 24.3 bits (51), Expect = 4.3,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 21/36 (58%)

Query: 117 DSGDKKIHAAGGNQNIQLNIPTKFTRRVGIISRQGS 152
           DS  K+I   GG QN +L+  ++  + V I+ R G+
Sbjct: 616 DSEKKRIVFCGGGQNKELSSTSEKKKHVVILLRNGT 651



>EAY10057.1 on XP_807743   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 931

 Score = 23.1 bits (48), Expect = 9.9,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 3/68 (4%)

Query: 59  TMPGKQIAKLPPIGPEIRSNSLKIAGDIVVKKLKGSPSSPITLNGIKPSPHRISLDDSDS 118
           T+     A  PP GP++ + +    G         +PS+  T  G + S  R+ L  S  
Sbjct: 740 TLSQSSPAGQPPSGPKLLNGNEGAGGG---STSTSAPSTATTSLGKEQSVIRLPLGTSSG 796

Query: 119 GDKKIHAA 126
           G+K +  A
Sbjct: 797 GNKNVDVA 804




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10064.1 hypothetical protein TVAG_329510 [Trichomonas
vaginalis G3]
         (120 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_804613   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   0.25 
XP_813606   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   0.98 
XP_814755   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   1.1  
XP_820142   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   2.1  
XP_813642   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   2.1  
XP_820017   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   3.6  
XP_817721   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   3.8  
XP_817996   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   5.1  
XP_821693   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   7.1  

>EAY10064.1 on XP_804613   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 881

 Score = 27.3 bits (59), Expect = 0.25,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)

Query: 8   TTILDYKNLLDKKDVDGCTKVTNDIIGFISTVQFSETT 45
           T+++  K      DV G  K+T  ++GF+S  +FSE T
Sbjct: 485 TSLIAQKERASTDDVCGAVKITAGLVGFLSG-KFSENT 521



>EAY10064.1 on XP_813606   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 930

 Score = 25.4 bits (54), Expect = 0.98,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 8   TTILDYKNLLDKKDVDGCTKVTNDIIGFISTVQFSETT 45
           T+++D K      DV    K+T  ++GF+S   FS+ T
Sbjct: 489 TSLIDEKERASTDDVCSAVKITAGLVGFLSG-NFSDKT 525



>EAY10064.1 on XP_814755   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 934

 Score = 25.4 bits (54), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 4/46 (8%)

Query: 3   LDSCITTILDYKNLLDKKDVD-GC--TKVTNDIIGFISTVQFSETT 45
           +D  ++ +  YK+ L+    D  C  TK+T+ ++GF+S   FS+ T
Sbjct: 477 VDERVSQLCHYKSALEDTPTDTACKNTKITDGLVGFLSG-NFSDDT 521



>EAY10064.1 on XP_820142   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 861

 Score = 24.6 bits (52), Expect = 2.1,   Method: Composition-based stats.
 Identities = 10/30 (33%), Positives = 18/30 (60%)

Query: 8   TTILDYKNLLDKKDVDGCTKVTNDIIGFIS 37
           T+++  K+     DV G  K+T  ++GF+S
Sbjct: 476 TSLIAQKDRASTDDVCGAVKITAGLVGFLS 505



>EAY10064.1 on XP_813642   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 872

 Score = 24.6 bits (52), Expect = 2.1,   Method: Composition-based stats.
 Identities = 10/30 (33%), Positives = 18/30 (60%)

Query: 8   TTILDYKNLLDKKDVDGCTKVTNDIIGFIS 37
           T+++  K+     DV G  K+T  ++GF+S
Sbjct: 480 TSLIAQKDRASTDDVCGAVKITAGLVGFLS 509



>EAY10064.1 on XP_820017   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 779

 Score = 23.9 bits (50), Expect = 3.6,   Method: Composition-based stats.
 Identities = 10/22 (45%), Positives = 16/22 (72%), Gaps = 1/22 (4%)

Query: 24  GCTKVTNDIIGFISTVQFSETT 45
           G  K+T+ ++GF+S   FS+TT
Sbjct: 505 GAVKITDGLVGFLSG-NFSDTT 525



>EAY10064.1 on XP_817721   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 922

 Score = 23.9 bits (50), Expect = 3.8,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 1/25 (4%)

Query: 21  DVDGCTKVTNDIIGFISTVQFSETT 45
           DV G  K+T+ ++GF+S   FS+ T
Sbjct: 497 DVCGAVKITDGLVGFLSG-SFSDGT 520



>EAY10064.1 on XP_817996   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 792

 Score = 23.5 bits (49), Expect = 5.1,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 8   TTILDYKNLLDKKDVDGCTKVTNDIIGFISTVQFSETT 45
           TT+L  K      +  G  K+T+ ++GF+S   FSE T
Sbjct: 456 TTLLAQKGF-SSDNACGADKITDGLVGFLSG-NFSENT 491



>EAY10064.1 on XP_821693   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 834

 Score = 23.1 bits (48), Expect = 7.1,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 3/30 (10%)

Query: 18  DKKDVDGC--TKVTNDIIGFISTVQFSETT 45
           D    DGC   K+T+ ++GF+S   FS+ T
Sbjct: 517 DSSTDDGCGAVKITDGLVGFLSG-NFSDGT 545




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10065.1 Leucine Rich Repeat family protein
[Trichomonas vaginalis G3]
         (680 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001710242  CWP2  (Others)  [Giardia duodenalis]                     27   3.0  

>EAY10065.1 on XP_001710242  CWP2  (Others)  [Giardia duodenalis]
          Length = 255

 Score = 26.9 bits (58), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 6/75 (8%)

Query: 193 KLLTLDLSEMGFIETDLPVLTSGFERNHTLKHLSISNNSFMNSASLMKSIMINTKLRFLK 252
            ++ +DLS+MG     LP     F     L+ L ++NN    +  +   +   T +++L+
Sbjct: 62  NVIGIDLSDMGLTGA-LPADIGCFPL---LRSLYLNNNDL--AGPIPTDLCALTSMQYLQ 115

Query: 253 ISNCGVTSESIEYLA 267
           I+N G+T +  E + 
Sbjct: 116 INNAGLTGDIPECIC 130




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10071.1 hypothetical protein TVAG_329580 [Trichomonas
vaginalis G3]
         (729 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_966307  PfEMP1  (Establishment)  [Plasmodium falciparum]            28   1.7  
XP_820135   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   2.3  
XP_812613   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   6.9  

>EAY10071.1 on XP_966307  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2238

 Score = 28.5 bits (62), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 22/105 (20%)

Query: 100 HVYEDDEDEFTKIQTVSYTEESIVLINPF------QSEQSLDTSIEASLDTTLNNSHEQS 153
           +VYE  ++EF KI         +  +N F      QSE +  ++ E  +D T        
Sbjct: 408 NVYEGYDEEFYKILKSG----EVGGLNKFLELLKEQSECNRFSTDEGIIDFT-------- 455

Query: 154 ESSESEEEEDGEIHQETLLEEEPISDVECNEEECDDEEFQRYEEN 198
           ++++   EE G  ++    EE P    EC  E+ D+ EFQ+ E+N
Sbjct: 456 KANDKPNEEKGTFYRSKYCEECP----ECGVEKKDNGEFQKKEKN 496



>EAY10071.1 on XP_820135   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1519

 Score = 28.1 bits (61), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 37/177 (20%), Positives = 65/177 (36%), Gaps = 2/177 (1%)

Query: 179 DVECNEEECDDEEFQRYEENLFDTSKIEQSSDETQSTTANISNISTNAKISQENEISQIN 238
             E    E    E +  E+   +    E  S E + T    +        S E + ++  
Sbjct: 720 PAEPKPAEPKSAEPKPAEQKSAEPKPAEPKSAEPKPTEPKSAEPKPAEPKSAEPKPAEP- 778

Query: 239 KPEQEKIKETKSFSIKDSDIAQNTSKDSSQIQNENKISTETEKIDKKTIKQDSSSNAITD 298
           KP + K  E KS   K ++      K +     E K S E +  + K+ +   +     +
Sbjct: 779 KPAEPKPAEPKSAEPKPAEPKPAEPKSAEPKPAEPK-SAEPKPAEPKSAEPKPAEPKSAE 837

Query: 299 IKPNYTKSSPDKPNENKSVQIDQSKLETNNLQSSNNIDPIKKTSIAKSSDQIQNEIK 355
            KP   KS+  KP E K  +   ++ +    +S+       K +  KS++    E K
Sbjct: 838 PKPTEPKSAEPKPAEPKPAEPKSAEPKPTEPKSAGPKPAEPKPAEPKSAEPKPAEPK 894



>EAY10071.1 on XP_812613   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1038

 Score = 26.6 bits (57), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 29/118 (24%), Positives = 52/118 (44%), Gaps = 11/118 (9%)

Query: 126 NPFQSEQSLDTSIEASLDTTLNNSHEQSESSESEEEEDGEIHQETLLEEEPISDVECNEE 185
           N F  + +  +  E S  TTLN + E  +     + +D +  + T+      SDVE + E
Sbjct: 784 NSFSEDNAQPSGDETSWQTTLNEAKESMQRDSDVQPQDLQSEKLTVF-----SDVEKSSE 838

Query: 186 ECDDEEFQRYEENLFDTSKIEQSSDETQSTTANISNISTNAKISQENEISQINKPEQE 243
             D EE +       D    ++S   T    A++S  +  A ++ E+++ Q  +P  E
Sbjct: 839 SNDTEEPEE------DGGTNDRSGGTTSPVAASLSMETAAASVNGEHQVQQSVEPSAE 890




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10078.1 alcohol dehydrogenase, iron-containing family
protein [Trichomonas vaginalis G3]
         (394 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_966305  PfEMP1  (Establishment)  [Plasmodium falciparum]            27   2.2  
XP_818353   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   4.2  
XP_817816   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   4.2  
XP_819530   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   4.4  
XP_808081   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   5.6  
XP_001608665  variant erythrocyte surface antigen-1, alpha subun...    25   6.7  

>EAY10078.1 on XP_966305  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3954

 Score = 26.9 bits (58), Expect = 2.2,   Method: Composition-based stats.
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 3/52 (5%)

Query: 24   KFVQPKSKVLVTFGGGSIDKNGARADVTKALAE-LECEVRWEGGIPPNPEYD 74
            +F + K+ V+ T G G+ +KN A  +  K   E  ECE R +  +PP  + D
Sbjct: 1265 QFCEKKNGVIPTTGSGTNNKNYAFKNTPKDHDEACECESRPQ--VPPKKKED 1314



>EAY10078.1 on XP_818353   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 903

 Score = 26.2 bits (56), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 12/24 (50%), Positives = 13/24 (54%)

Query: 79  IAQVVREWKPDLLLAVGGGSTLDG 102
           + QV     PD    VGGGST DG
Sbjct: 810 VVQVTSGTSPDGTQTVGGGSTADG 833



>EAY10078.1 on XP_817816   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 912

 Score = 26.2 bits (56), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 12/24 (50%), Positives = 13/24 (54%)

Query: 79  IAQVVREWKPDLLLAVGGGSTLDG 102
           + QV     PD    VGGGST DG
Sbjct: 820 VVQVTSGASPDGTQTVGGGSTADG 843



>EAY10078.1 on XP_819530   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 904

 Score = 26.2 bits (56), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 12/24 (50%), Positives = 13/24 (54%)

Query: 79  IAQVVREWKPDLLLAVGGGSTLDG 102
           + QV     PD    VGGGST DG
Sbjct: 811 VVQVTSGTSPDGTKTVGGGSTADG 834



>EAY10078.1 on XP_808081   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 893

 Score = 25.8 bits (55), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 14/39 (35%), Positives = 16/39 (41%)

Query: 79  IAQVVREWKPDLLLAVGGGSTLDGTKFLSLAAALDPSNE 117
           + QV     PD    VGGGST DG   +      D   E
Sbjct: 803 VVQVTSGTSPDGNQTVGGGSTADGEPTMETREGTDVQEE 841



>EAY10078.1 on XP_001608665  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1326

 Score = 25.4 bits (54), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 9/45 (20%)

Query: 310 RVFDIREG---------SDEEKATKFIERLQEWIISIGHVKTVSE 345
           RV  ++EG         S+EEKA   +E++ E ++ +G+ +   E
Sbjct: 676 RVGKVKEGLGKVVSKGKSEEEKAKALLEKIGEVVVQLGNAQEALE 720




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10083.1 Glycosyl hydrolases family 31 protein
[Trichomonas vaginalis G3]
         (782 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_815119   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           32   0.084
XP_811683   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           31   0.30 
XP_814969   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.38 
AAX59907  TaSE  (Establishment)  [Theileria annulata]                  27   4.4  

>EAY10083.1 on XP_815119   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 380

 Score = 32.3 bits (72), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)

Query: 691 PTTLFVYLDENDSAKGDVYIDDYET--SQFENGIWLHKEFKF 730
           PT   V +  N S+ GD +IDDY +  +   N + +H  F+F
Sbjct: 219 PTAGLVAVLSNTSSGGDTWIDDYHSVNATVRNAVKVHDGFRF 260



>EAY10083.1 on XP_811683   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 725

 Score = 30.8 bits (68), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)

Query: 691 PTTLFVYLDENDSAKGDVYIDDYET--SQFENGIWLHKEFKF 730
           PT   V L  N +A GD +IDDY +  +   N + +H  FKF
Sbjct: 492 PTVGLVGLLSN-AASGDTWIDDYHSVNATVRNAVKVHDGFKF 532



>EAY10083.1 on XP_814969   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 258

 Score = 30.0 bits (66), Expect = 0.38,   Method: Composition-based stats.
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 3/42 (7%)

Query: 691 PTTLFVYLDENDSAKGDVYIDDYET--SQFENGIWLHKEFKF 730
           PT   V L  N +A GD +IDDY +  ++  N + +H  FKF
Sbjct: 22  PTAGLVGLLSN-AASGDTWIDDYRSVNAKVMNAVKVHDGFKF 62



>EAY10083.1 on AAX59907  TaSE  (Establishment)  [Theileria annulata]
          Length = 429

 Score = 26.9 bits (58), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 22/92 (23%), Positives = 36/92 (39%), Gaps = 21/92 (22%)

Query: 246 IFIC-KPLKIIQNYCELTG-HPMMPPLW-----SLGYHQCRWGYKTQAICEEVISNLE-- 296
           IFIC +P  + Q YC       ++  +W     S+     R   +    C    S L+  
Sbjct: 239 IFICARPQHLQQAYCSAVAIRVLLQKVWAQLDKSVKAFYTRLSMRKIQQCLRRPSELQWD 298

Query: 297 ------------KENFPFDCFWLDLDHLKDRS 316
                       +  F + CFW+D+  +KD+S
Sbjct: 299 VSNILAKMGIHHRNTFYWGCFWIDIGEIKDKS 330




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10084.1 hypothetical protein TVAG_329710 [Trichomonas
vaginalis G3]
         (603 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609167  variant erythrocyte surface antigen-1, alpha subun...    29   0.99 
ABA06452  MSA-2b  (Invasion)  [Babesia bovis]                          26   5.0  
XP_811031   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   6.1  
XP_001609041  variant erythrocyte surface antigen-1, alpha subun...    26   6.6  
XP_001609618  variant erythrocyte surface antigen-1, alpha subun...    26   9.0  

>EAY10084.1 on XP_001609167  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1317

 Score = 28.9 bits (63), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 3    EEEVKSDPEFQLKAIEKAYEQSSQQLNQLESVLQKFSTNFQSQEHSLTELYQKISKQQ 60
            ++E K + ++ +   +K   Q  Q L+ L +V++       SQEH LTEL  ++ + Q
Sbjct: 1191 QQEKKDEGDYSIDNTKKT-RQCHQFLDSLNAVIKNKQDQATSQEHPLTELLTQVGQLQ 1247



>EAY10084.1 on ABA06452  MSA-2b  (Invasion)  [Babesia bovis]
          Length = 254

 Score = 26.2 bits (56), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 14/98 (14%)

Query: 3   EEEVKSDPEFQLKAIEKAYEQSSQQLNQLESVLQKFSTN--FQSQEH---SLTELYQKIS 57
           E +VKS  E   +A+E     + Q L+ +++V Q   TN  F++ +     L+ L  + +
Sbjct: 50  EGKVKSILEKNFEAVEMEASLAPQTLDAMKAVRQLIKTNTPFKTSDFDTLDLSYLSGQTN 109

Query: 58  KQQ---------GIHRNIVKVRDCINEIQNKLTSTEQL 86
           K+Q         G+  NIVKV + + E  +   S ++L
Sbjct: 110 KEQFQLLIDAINGMKENIVKVNEYLTEDGDHSLSGDEL 147



>EAY10084.1 on XP_811031   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 785

 Score = 26.2 bits (56), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 7/42 (16%)

Query: 480 MNETWNAA----FQILSYDKAFDGFKKGDKL---NTQQKKII 514
           M +TW +A    F +L Y  A D F   D L   N + K +I
Sbjct: 307 MGKTWKSAVRSSFHLLKYAAALDDFSASDDLITANIETKSVI 348



>EAY10084.1 on XP_001609041  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1318

 Score = 26.2 bits (56), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 14/39 (35%), Positives = 21/39 (53%)

Query: 22   EQSSQQLNQLESVLQKFSTNFQSQEHSLTELYQKISKQQ 60
            +Q  Q L  L +V++       SQEH LTEL  ++ + Q
Sbjct: 1210 KQCHQFLESLSAVIKNKQDQATSQEHPLTELLTQVGQLQ 1248



>EAY10084.1 on XP_001609618  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1325

 Score = 25.8 bits (55), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 14/59 (23%), Positives = 32/59 (54%), Gaps = 1/59 (1%)

Query: 3    EEEVKSDPEFQLKAIEKAYEQSSQQ-LNQLESVLQKFSTNFQSQEHSLTELYQKISKQQ 60
            + + K+D ++ ++  +K   +   Q L+ L +V+ K   +   ++H LTEL +++   Q
Sbjct: 1197 QRDGKTDGQYDIENKKKERTKKCHQFLDSLSAVIDKNKQSASQKDHPLTELLKQVGALQ 1255




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10094.1 hypothetical protein TVAG_274570 [Trichomonas
vaginalis G3]
         (85 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_827748  VSG  (Establishment)  [Trypanosoma brucei]                  22   8.6  

>EAY10094.1 on XP_827748  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 550

 Score = 21.9 bits (45), Expect = 8.6,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 16/22 (72%)

Query: 35  VIQTFEPIDIIPETNGDKSSNS 56
           V+ T+E +D + + NG KSS++
Sbjct: 202 VLDTYENLDEVMDANGWKSSHA 223




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10098.1 CK1 family protein kinase [Trichomonas
vaginalis G3]
         (343 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    40   9e-05
XP_001349032  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   3.7  

>EAY10098.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 40.4 bits (93), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 17/156 (10%)

Query: 16  NKYEITKHIGRGGYGDIYNVRDLNKNVYAMKTEYLSAKRKALLSEMYFLEKLQGSDFFPK 75
           + YEI + IGRG + +++   +       +       K+K +  E+  L+ L+G     K
Sbjct: 53  DSYEIVRKIGRGKFSEVFEGLNTVTKDKCVIKILKPVKKKKIKREIKILQNLRGGPNIIK 112

Query: 76  LIEKGKTEKFYYCIMELLGPSLSKMRRCLPDSHYKT-YSVLRLSS------EMLKCIQEF 128
           L++  K         +   PSL  +   + ++ +KT Y  L +        ++LK +   
Sbjct: 113 LLDIVKDP-------QSRTPSL--IFEHVNNTDFKTLYPTLTIQDIKYYIYQLLKAMNYC 163

Query: 129 HNCGFVHRDIKPSNFLIRANRDHPICLIDFGLSAFF 164
           H+ G +HRDIKP N +I   +   + LID+GL+ F+
Sbjct: 164 HSQGIMHRDIKPHNVMIDHEKK-ILRLIDWGLAEFY 198



>EAY10098.1 on XP_001349032  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2267

 Score = 26.2 bits (56), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 4/52 (7%)

Query: 63  FLEKLQGSDFFPKLIEKGKTEKFYYCIMELLGPS----LSKMRRCLPDSHYK 110
            L+K + +D  P  I+K     FYY +  +L  S    + K+ RCL + + K
Sbjct: 613 ILKKEKKTDNDPDEIQKTFNNFFYYWVAHMLKDSIYWRMKKLERCLQNGNKK 664




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10103.1 surface antigen BspA-like [Trichomonas
vaginalis G3]
         (732 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10104.1 hypothetical protein TVAG_274670 [Trichomonas
vaginalis G3]
         (230 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_812697   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   1.8  
XP_821088   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   2.5  
XP_966160  PfEMP1  (Establishment)  [Plasmodium falciparum]            25   6.7  

>EAY10104.1 on XP_812697   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 911

 Score = 26.2 bits (56), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 38/82 (46%)

Query: 56  DKIKLKSIGESSRLEEESKAIQLHYRDLLNELKERQLQEIQQLKEERKQTLKREKDRPIP 115
           D   +  IG  S+ + +  A  L Y+   N  +E  +   +++K++ K+T       P+ 
Sbjct: 417 DNTHIVDIGPVSKKDHDVAASSLLYKGGDNNNQEELIALYEKMKDDEKETSPGMASVPLN 476

Query: 116 LARERLKKAILIGKTGDYELAK 137
              +R+K+ +   K  D  ++K
Sbjct: 477 KQLQRVKEVLATWKEVDERVSK 498



>EAY10104.1 on XP_821088   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 910

 Score = 25.8 bits (55), Expect = 2.5,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 47/103 (45%), Gaps = 4/103 (3%)

Query: 56  DKIKLKSIGESSRLEEESKAIQLHYRDLLNELKERQLQEIQQLKEERKQTLKREKDRPIP 115
           D   +  IG  S+ + +  A  L Y+   N  +E  +   +++K++ K+T       P+ 
Sbjct: 416 DNTHIVDIGPVSKKDHDVAASSLLYKGGDNNNQEELIALYEKMKDDEKETSPGMASVPLN 475

Query: 116 LARERLKKAILIGKTGDYELAKKIREEAISITEQELPIRLEAC 158
              +R+K+ +   K    E+ +++ +   ++  QE+     AC
Sbjct: 476 KQLQRVKEVLATWK----EVDERVSQLCATLLAQEVTPPDSAC 514



>EAY10104.1 on XP_966160  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2394

 Score = 24.6 bits (52), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 23/96 (23%), Positives = 48/96 (50%), Gaps = 13/96 (13%)

Query: 31   EEIKKYYIKKYRPDFSDVIRI----QRQKDKIKLK-SIGESSRLEEESKAIQLHYRDLLN 85
            EEIKK Y+++Y+  + +   +    ++ +D+ + K +IG    L+   K+ Q +      
Sbjct: 1820 EEIKKPYLEQYKNGYGENYNVKTILEKFQDQPEFKKAIGPCPTLDAFEKSKQCNATASSE 1879

Query: 86   ELKERQ--------LQEIQQLKEERKQTLKREKDRP 113
            + K+          LQE+++L+E+ K+   +  D P
Sbjct: 1880 KGKDGNKSYVIDCLLQELEKLQEKAKKCHDQHSDNP 1915




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10109.1 hypothetical protein TVAG_274720 [Trichomonas
vaginalis G3]
         (427 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_815706   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.24 
XP_815707   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.24 
XP_808165   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.38 
XP_808957   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   0.70 

>EAY10109.1 on XP_815706   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 907

 Score = 30.4 bits (67), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 22/95 (23%)

Query: 345 TNITDIFYCGTNTFDTISFDRNNVNVHVSDSFPKSSTKFLGCEIVDRTY----TCQDYIC 400
           T +  +   GT T   +S+D+N     V+D FPK  T +     VD+TY       D + 
Sbjct: 566 TPLMGLKKMGTTTLLGLSYDKNMEWRVVNDLFPKHFTAWE----VDKTYHVVLKMHDGMG 621

Query: 401 SNFVDQSFMDCPTMNLCFYN----------HFYFN 425
           S +VD + +     N+   N          HFYF 
Sbjct: 622 SVYVDGTLL----WNMRLKNSFNEGLDTVSHFYFG 652



>EAY10109.1 on XP_815707   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 907

 Score = 30.4 bits (67), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 22/95 (23%)

Query: 345 TNITDIFYCGTNTFDTISFDRNNVNVHVSDSFPKSSTKFLGCEIVDRTY----TCQDYIC 400
           T +  +   GT T   +S+D+N     V+D FPK  T +     VD+TY       D + 
Sbjct: 566 TPLMGLKKMGTTTLLGLSYDKNMEWRVVNDLFPKHFTAWE----VDKTYHVVLKMHDGMG 621

Query: 401 SNFVDQSFMDCPTMNLCFYN----------HFYFN 425
           S +VD + +     N+   N          HFYF 
Sbjct: 622 SVYVDGTLL----WNMRLKNSFNEGLDTVSHFYFG 652



>EAY10109.1 on XP_808165   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 918

 Score = 29.6 bits (65), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 22/95 (23%)

Query: 345 TNITDIFYCGTNTFDTISFDRNNVNVHVSDSFPKSSTKFLGCEIVDRTY----TCQDYIC 400
           T +  +   GT T   +S+D N     V+D FPK  T +     VD+TY       D + 
Sbjct: 564 TPLMGLKKMGTTTLLGLSYDNNMEWSVVNDLFPKHFTAWE----VDKTYHVVLKMHDGVG 619

Query: 401 SNFVDQSFMDCPTMNLCFYN----------HFYFN 425
           S +VD + +     N+   N          HFYF 
Sbjct: 620 SVYVDGTLL----WNMRLRNSFNEGLDEVSHFYFG 650



>EAY10109.1 on XP_808957   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1446

 Score = 28.9 bits (63), Expect = 0.70,   Method: Composition-based stats.
 Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 14/81 (17%)

Query: 354 GTNTFDTISFDRNNVNVHVSDSFPKSSTKFLGCEIVDRTY----TCQDYICSNFVDQSFM 409
           GT T   +S+D+N     V+D FPK  T +     VD+TY       D + S +VD + +
Sbjct: 574 GTTTLLGLSYDKNMEWRVVNDLFPKHFTAWE----VDKTYHVVLKMHDGVGSVYVDGTLL 629

Query: 410 ------DCPTMNLCFYNHFYF 424
                 +     L   +HFYF
Sbjct: 630 WNMRLKNSFNEGLGTVSHFYF 650




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10110.1 hypothetical protein TVAG_274730 [Trichomonas
vaginalis G3]
         (485 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ABR92029  MSA-1  (Invasion)  [Babesia bovis]                           26   5.3  
ABR92031  MSA-1  (Invasion)  [Babesia bovis]                           26   5.4  
ABR92027  MSA-1  (Invasion)  [Babesia bovis]                           26   5.5  

>EAY10110.1 on ABR92029  MSA-1  (Invasion)  [Babesia bovis]
          Length = 330

 Score = 25.8 bits (55), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 14/85 (16%)

Query: 193 ILKLRYQIKQSQTEARVCQGNIRRIAQIQDFADIAKNLIIKFD------FKGFRKNYIFT 246
           + K  Y++   +  A VC+G       + D +D  K L++ FD        G  +NY+  
Sbjct: 168 VYKEEYKV-NVEGMAAVCKG------FLGDGSDFNK-LVVTFDDFARGRHYGLAENYVEP 219

Query: 247 QPATNKYTRIISALDKMISTSSPVE 271
            P       +I+ ++K ++T  PVE
Sbjct: 220 NPDLTLPEGLIAEVEKEVATVKPVE 244



>EAY10110.1 on ABR92031  MSA-1  (Invasion)  [Babesia bovis]
          Length = 330

 Score = 25.8 bits (55), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 14/85 (16%)

Query: 193 ILKLRYQIKQSQTEARVCQGNIRRIAQIQDFADIAKNLIIKFD------FKGFRKNYIFT 246
           + K  Y++   +  A VC+G +       D +D  K L++ FD        G  +NY+  
Sbjct: 168 VYKEEYKV-NVEGMAAVCKGFL------GDGSDFNK-LVVTFDDFARGRHYGLAENYVEP 219

Query: 247 QPATNKYTRIISALDKMISTSSPVE 271
            P       +I+ ++K ++T  PVE
Sbjct: 220 NPDLTLPEGLIAEVEKEVATVKPVE 244



>EAY10110.1 on ABR92027  MSA-1  (Invasion)  [Babesia bovis]
          Length = 330

 Score = 25.8 bits (55), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 14/85 (16%)

Query: 193 ILKLRYQIKQSQTEARVCQGNIRRIAQIQDFADIAKNLIIKFD------FKGFRKNYIFT 246
           + K  Y++   +  A VC+G +       D +D  K L++ FD        G  +NY+  
Sbjct: 168 VYKEEYKV-NVEGMAAVCKGFL------GDGSDFNK-LVVTFDDFARGRHYGLAENYVEP 219

Query: 247 QPATNKYTRIISALDKMISTSSPVE 271
            P       +I+ ++K ++T  PVE
Sbjct: 220 NPDLTLPEGLIAEVEKEVATVKPVE 244




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10113.1 CAMK family protein kinase [Trichomonas
vaginalis G3]
         (350 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    61   1e-11
XP_001609602  SBP2  (Others)  [Babesia bovis]                          25   9.7  

>EAY10113.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 61.2 bits (147), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 86/194 (44%), Gaps = 41/194 (21%)

Query: 110 KHIFAQLATVLRFLHKEKNIAHRDIKLENILLDDHNNI-RIIDFGLSKFIQKDHLTETLC 168
           K+   QL   + + H +  I HRDIK  N+++D    I R+ID+GL++F   +       
Sbjct: 150 KYYIYQLLKAMNYCHSQ-GIMHRDIKPHNVMIDHEKKILRLIDWGLAEFYHPEQEYSVRV 208

Query: 169 GSPQYASPEILMGQK-YGFEADIWASGILLYTLVFGIFPF-----ASENITKLARAI--- 219
            +  Y  PE+L+  + Y +  DIW+ G +L  ++F   PF       + + K+A+ +   
Sbjct: 209 ATRYYKGPELLVDMRYYDYSLDIWSIGCMLAGIIFKKEPFFYGHDNYDQLVKIAKVLGTE 268

Query: 220 ----------IYKPPQFEGKISN--------------------ELIDLITKLLVKNPKER 249
                     +   P ++  + N                    E++DL+ ++LV +  +R
Sbjct: 269 DLHRYFEKYGLKFAPAYQEILGNHSKKPWTKFVHHENQHLVSPEVMDLLDRMLVYDHTKR 328

Query: 250 INIEEVCQHPWIRD 263
           I   E  +HP+  +
Sbjct: 329 ITPLEAMEHPFFNE 342



>EAY10113.1 on XP_001609602  SBP2  (Others)  [Babesia bovis]
          Length = 2248

 Score = 24.6 bits (52), Expect = 9.7,   Method: Composition-based stats.
 Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 1/23 (4%)

Query: 312 YKLIKNDHKFFGRVPLLKKNGKP 334
           Y+L+ +DH FF R P    NG P
Sbjct: 34  YELMSDDHTFFAR-PGYDINGSP 55




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10116.1 hypothetical protein TVAG_274800 [Trichomonas
vaginalis G3]
         (598 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_810140   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   2.3  

>EAY10116.1 on XP_810140   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 923

 Score = 27.7 bits (60), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 65/175 (37%), Gaps = 34/175 (19%)

Query: 319 LNKMTTISKSVDSANDAIQDLTTQLYQRTIELRKAKNEYHVIFDPYQDLLNSYV--KLLG 376
           + K T +  S D  N+    +    Y R +   +    YHV+   +  + + YV   LL 
Sbjct: 571 MGKTTLLGLSYD--NNMRWSVVHGSYLRYLTKWELDKTYHVVLKMHDGVGSVYVDGTLLW 628

Query: 377 NQRNNISVSTTLSSISSL-FSLKDNNLKSF-LESAISNVKLTGVKSN------------- 421
           N R   S +  L ++S   F   D  L S  + + ++NV L     N             
Sbjct: 629 NLRLRNSFNEGLDTVSHFYFGAYDEQLSSGKIHATVANVFLYNRPLNDTEIGALNASKVT 688

Query: 422 -PRPARKLADVPASNTGSKSKFHLKNLNQSPSSSKHGSSVTSNVTSTDPSPAPSA 475
            P P RK   VPA+               SPS       +T+N   T P+P P+ 
Sbjct: 689 IPPPERK--PVPAAAA------------TSPSVGPANERMTTNTQPTAPAPTPAG 729




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10117.1 hypothetical protein TVAG_274810 [Trichomonas
vaginalis G3]
         (60 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10120.1 hypothetical protein TVAG_274840 [Trichomonas
vaginalis G3]
         (95 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10122.1 CAMK family protein kinase [Trichomonas
vaginalis G3]
         (333 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    65   8e-13
XP_817716   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           31   0.12 

>EAY10122.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 65.1 bits (157), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 95/207 (45%), Gaps = 13/207 (6%)

Query: 19  SVVKHYNIVKTIGKGGFSVVVLGVHQKTGQKVAIKIIDREEVSKQQIFCYLENELRLISR 78
           +V   Y IV+ IG+G FS V  G++  T  K  IKI+   +  K +    +   LR    
Sbjct: 50  NVPDSYEIVRKIGRGKFSEVFEGLNTVTKDKCVIKILKPVKKKKIKREIKILQNLR---- 105

Query: 79  FDHPNIVKVYDIIYEED--IIMVVMEYLECGDLQKLVSQGIFFNCHEQITIALQILSALS 136
              PNI+K+ DI+ +       ++ E++   D + L       +    I    Q+L A++
Sbjct: 106 -GGPNIIKLLDIVKDPQSRTPSLIFEHVNNTDFKTLYPTLTIQDIKYYI---YQLLKAMN 161

Query: 137 YLHKRGIAHRDIKPENILFDKYYN-PKLIDFGLSR--ENCNALKTLCGTTDYLAPEVLRM 193
           Y H +GI HRDIKP N++ D      +LID+GL+              T  Y  PE+L  
Sbjct: 162 YCHSQGIMHRDIKPHNVMIDHEKKILRLIDWGLAEFYHPEQEYSVRVATRYYKGPELLVD 221

Query: 194 KEYDGKKADLWSLGIVLHILSSNAFPF 220
             Y     D+WS+G +L  +     PF
Sbjct: 222 MRYYDYSLDIWSIGCMLAGIIFKKEPF 248



>EAY10122.1 on XP_817716   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 948

 Score = 30.8 bits (68), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 7/80 (8%)

Query: 121 CHEQITIALQILSALSYLHKRGIAHRDIKPENILFDKYYNPKLID-----FGLSRENCNA 175
           C     IA + +S+L    ++    RD+K E    D  Y P L+      F ++   C  
Sbjct: 58  CGSGAVIAKEAVSSLKSSPEKHFGWRDVKTEEETVDSLYVPSLVKVNGDVFAVAEAQCKK 117

Query: 176 LKTLCGTTDYLAPEVLRMKE 195
            K  C  T  +A E+L++ E
Sbjct: 118 -KEGCSFTG-IASELLKLNE 135




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10123.1 hypothetical protein TVAG_274870 [Trichomonas
vaginalis G3]
         (3211 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 32   0.94 
XP_808156   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   5.3  
XP_815318   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   5.7  
XP_821677   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   6.6  
XP_001609533  variant erythrocyte surface antigen-1, alpha subun...    28   7.3  
XP_001349737  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   9.4  

>EAY10123.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 31.6 bits (70), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 4/65 (6%)

Query: 2231 VMRSPIDDLMELLYDKLKTSMIEIIIKATNERSLNDLITASL----FTVCKFPYANLVSQ 2286
             ++   +D++EL+Y ++K    EII K  N  SL+D     L    F + K  Y N  SQ
Sbjct: 1078 TIKQQKNDIIELIYKRIKDINQEIIEKVDNYYSLSDKALTKLKSIHFNIDKEKYKNPKSQ 1137

Query: 2287 ESMKM 2291
            E++K+
Sbjct: 1138 ENIKL 1142



>EAY10123.1 on XP_808156   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1058

 Score = 29.3 bits (64), Expect = 5.3,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 4/74 (5%)

Query: 811 INTIGREYVENIPSLIEQIKSEQTKTKEDLRKETNSHFRDQKIKYLKILDQKMAKIQEIQ 870
           + + G  + EN   L E   ++Q    ED      S  RD +++  ++   K  +I +++
Sbjct: 799 VESAGNSHQENNFQLSEGKTAQQATLNED----NKSMQRDSEVQPRELPSTKSTEIADVE 854

Query: 871 GQLQTKKEEFTEEE 884
           G  ++  +E  EEE
Sbjct: 855 GSAESNDKEQPEEE 868



>EAY10123.1 on XP_815318   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 587

 Score = 28.9 bits (63), Expect = 5.7,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 4/74 (5%)

Query: 811 INTIGREYVENIPSLIEQIKSEQTKTKEDLRKETNSHFRDQKIKYLKILDQKMAKIQEIQ 870
           + + G  + EN   L E   ++Q    ED      S  RD +++  ++   K  +I +++
Sbjct: 328 VESAGNSHQENNFQLSEGKTAQQATLNED----NKSMQRDSEVQPRELPSTKSTEIADVE 383

Query: 871 GQLQTKKEEFTEEE 884
           G  ++  +E  EEE
Sbjct: 384 GSAESNDKEQPEEE 397



>EAY10123.1 on XP_821677   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 861

 Score = 28.9 bits (63), Expect = 6.6,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 6/72 (8%)

Query: 2762 MISGPIRQQFMQNVNQIFNDNLADSTFFISLKDVMGTDDPLILSLI--SGD----RLICC 2815
            +++ P+  +  +N   + +  L D+T  + +  V G DD    SL+  SGD    +LI  
Sbjct: 369  LVTLPVYSKEEKNGKGVLHLWLTDNTHIVDIGPVSGEDDVAASSLLYKSGDNNEEKLIAL 428

Query: 2816 YDPHGTEFSYVG 2827
            Y+  G E S +G
Sbjct: 429  YEKKGGEGSSLG 440



>EAY10123.1 on XP_001609533  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1162

 Score = 28.5 bits (62), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 8/105 (7%)

Query: 2655 VQIQMDEHTKTIERRE-EGYKKILQRIKEAKDDLELH-QKGKEEVTIKLQEEQSALVKRK 2712
            V +Q+    + +E ++ E    +   +++AK +LE   +K    + +KL E ++AL    
Sbjct: 646  VVVQLGNAQEALEGKDKEAINAVKTALEKAKGELEEAVKKVNGGLDVKLGEAKTAL---- 701

Query: 2713 EFLEKAKAAASIFPDVKEDLSRFVNGEKTYGKNLTNFLVKSVVEI 2757
            E L      + I  +V E L    NGE   GKN  +  +  V E+
Sbjct: 702  EAL--TNGGSGILGEVGEKLETATNGEYDPGKNKISESINKVREV 744



>EAY10123.1 on XP_001349737  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2199

 Score = 28.5 bits (62), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 47/110 (42%), Gaps = 20/110 (18%)

Query: 1531 DNSRKTLKFDFLSNFKQVVPPDVISLIKFEEMMMKTPKKTLNVGK-------------NM 1577
            DN   TLK DF+SN  Q  P DV +  K  ++   T   TL   K             N+
Sbjct: 1914 DNEWNTLKDDFISNMLQNQPKDVPNDYKSGDIPFNTQPNTLYFDKPEEKPFITSIHDRNL 1973

Query: 1578 LQTKLFKYNFDKITELINTKQHVFLMSGPPFSGTSTVIEAASLSLGMNYH 1627
            L  + + YN +  T  ++  ++V   S   +SG    I+  + SL  N H
Sbjct: 1974 LNGEEYSYNVNMSTNSMDDPKYV---SNNVYSG----IDLINDSLSGNKH 2016




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10124.1 hypothetical protein TVAG_274880 [Trichomonas
vaginalis G3]
         (80 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609666  variant erythrocyte surface antigen-1, alpha subun...    23   3.3  
XP_001351321  PfEMP1  (Establishment)  [Plasmodium falciparum]         22   6.0  

>EAY10124.1 on XP_001609666  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1269

 Score = 22.7 bits (47), Expect = 3.3,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 2/37 (5%)

Query: 43  KIKQPLDR--EGILRKIKLHEDNIAELRKKLEELEKG 77
           K+K+ L +  EG+       +D + E +KKL+EL  G
Sbjct: 641 KVKEALRKAKEGLETAKNGLKDKLEEAKKKLDELTNG 677



>EAY10124.1 on XP_001351321  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3467

 Score = 21.9 bits (45), Expect = 6.0,   Method: Composition-based stats.
 Identities = 9/12 (75%), Positives = 10/12 (83%)

Query: 18   EYIKSGTIPEGF 29
            E +KSGTIPE F
Sbjct: 1298 EELKSGTIPENF 1309




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10131.1 hypothetical protein TVAG_088460 [Trichomonas
vaginalis G3]
         (1132 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_816821   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   1.4  

>EAY10131.1 on XP_816821   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 782

 Score = 29.3 bits (64), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 8/60 (13%)

Query: 238 NTLMYSQ---DGYIENLRINKVDLLDYNG-KTPLFLATECSSEKVAKHFVKHGAVGTYIC 293
           N L+Y++   D  I  L  NK+ +    G KT   LA   + E  A+HF  HG  GT +C
Sbjct: 708 NVLLYNRPLDDNEIRVLNANKISIPKLTGLKT---LAAGATGEGTARHFGAHGDGGT-VC 763




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10138.1 hypothetical protein TVAG_088530 [Trichomonas
vaginalis G3]
         (907 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAM47174  Rh4  (Adhesin)  [Plasmodium falciparum]                      29   1.2  
AAM47192  Rh4  (Adhesin)  [Plasmodium falciparum]                      29   1.3  
AAM47175  Rh4  (Adhesin)  [Plasmodium falciparum]                      29   1.3  
XP_815156   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   1.3  
XP_814219   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   3.7  
XP_818893   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   3.9  
XP_818892   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   4.1  
XP_845637  VSG  (Establishment)  [Trypanosoma brucei]                  27   6.0  
XP_821078   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   6.3  
XP_807549   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   7.3  

>EAY10138.1 on AAM47174  Rh4  (Adhesin)  [Plasmodium falciparum]
          Length = 1711

 Score = 29.3 bits (64), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 18/68 (26%), Positives = 37/68 (54%), Gaps = 7/68 (10%)

Query: 177  DISNKIKTYPQMETDVSNLVLQFPTI-----TKR--IEKKVNEVINAFDNWKFHTNSGNN 229
            + S +I  Y Q +    N+ ++F  I     +KR  ++KK+ E+IN++D   ++ N+  +
Sbjct: 1268 NYSQQILNYSQAQNSFFNIFMKFQNINNDINSKRYNVQKKITEIINSYDIINYNKNNIKD 1327

Query: 230  SFKNLPNI 237
             ++   NI
Sbjct: 1328 IYQQFKNI 1335



>EAY10138.1 on AAM47192  Rh4  (Adhesin)  [Plasmodium falciparum]
          Length = 1716

 Score = 29.3 bits (64), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 18/68 (26%), Positives = 37/68 (54%), Gaps = 7/68 (10%)

Query: 177  DISNKIKTYPQMETDVSNLVLQFPTI-----TKR--IEKKVNEVINAFDNWKFHTNSGNN 229
            + S +I  Y Q +    N+ ++F  I     +KR  ++KK+ E+IN++D   ++ N+  +
Sbjct: 1269 NYSQQILNYSQAQNSFFNIFMKFQNINNDINSKRYNVQKKITEIINSYDIINYNKNNIKD 1328

Query: 230  SFKNLPNI 237
             ++   NI
Sbjct: 1329 IYQQFKNI 1336



>EAY10138.1 on AAM47175  Rh4  (Adhesin)  [Plasmodium falciparum]
          Length = 1711

 Score = 29.3 bits (64), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 18/68 (26%), Positives = 37/68 (54%), Gaps = 7/68 (10%)

Query: 177  DISNKIKTYPQMETDVSNLVLQFPTI-----TKR--IEKKVNEVINAFDNWKFHTNSGNN 229
            + S +I  Y Q +    N+ ++F  I     +KR  ++KK+ E+IN++D   ++ N+  +
Sbjct: 1270 NYSQQILNYSQAQNSFFNIFMKFQNINNDINSKRYNVQKKITEIINSYDIINYNKNNIKD 1329

Query: 230  SFKNLPNI 237
             ++   NI
Sbjct: 1330 IYQQFKNI 1337



>EAY10138.1 on XP_815156   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 966

 Score = 29.3 bits (64), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 29/120 (24%), Positives = 59/120 (49%), Gaps = 8/120 (6%)

Query: 421 VNQDNQDNLSNNLMRINAAHNSKETQLVAQLRNVQDDIENLSVKVNDSI--SQLQRKMVS 478
           V++ + D  +++L+  +A    K  +L+A      DD +  S+ +   +  +QLQR +  
Sbjct: 425 VSEKDDDVTASSLLYKSAGGKDKNDELIALYEKKSDDKDTASLGMVSVLLTAQLQR-VKE 483

Query: 479 LLATTNDISP--QKVEVSKSPKEETTPKVTITKNIRKMEALTPLPTKSISDSANNTQRSE 536
           +L T N++     K+  S++ KE+T+     + +I+  + L    + + S   N T R E
Sbjct: 484 VLTTWNEVDDFVSKLCPSENAKEDTSSGTACSADIKITDGLVGFLSGNFS---NKTWRDE 540




 Score = 26.6 bits (57), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 10/94 (10%)

Query: 235 PNINTFTKNAGTSPRIPEQPKVEQPITVIVD---DTIPGNREIAPISLPDSKPTSEEKIE 291
           P + T     G + +  E P++   I+   D    T  G  +  P   P++  +S E  E
Sbjct: 846 PAVGTV---GGDTTQGNESPQIPVGISDAADANTSTTEGEGQYGPTVNPEAGVSSGESGE 902

Query: 292 PLEDDKQQEEEQIPEPQHEENNIQL---IDDVPQ 322
           P E    QEEE  P+   E N   L   + +VPQ
Sbjct: 903 PTEKINGQEEEIHPQ-DREVNATALSSSLGNVPQ 935



>EAY10138.1 on XP_814219   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 958

 Score = 27.7 bits (60), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 38/96 (39%), Gaps = 12/96 (12%)

Query: 235 PNINTF---TKNAGTSPRIPEQPKVEQPITVIVDDTIP---GNREIAPISLPDSKPTSEE 288
           P + T    TK    SP+IP        I+   D   P   G  +  P   P++  +S E
Sbjct: 839 PAVGTVGGDTKQGNGSPQIP------VGISDTADANTPTTEGEGQYGPTVNPEAGVSSGE 892

Query: 289 KIEPLEDDKQQEEEQIPEPQHEENNIQLIDDVPQIS 324
             E ++    QEEE+I     E N   L   +  +S
Sbjct: 893 NGETVKGTNGQEEEEIHPQDGELNATALSSSLGNVS 928



>EAY10138.1 on XP_818893   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 956

 Score = 27.7 bits (60), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 41/103 (39%), Gaps = 9/103 (8%)

Query: 225 NSGNNSFKNLPNINTFTKNAGTSPRIPEQPKVEQPITVIVDDTIP---GNREIAPISLPD 281
           +S +N    +  +   TK    SP+IP        I+   D   P   G  +  P   P+
Sbjct: 830 DSSSNGNPAVGTVGGDTKQGNGSPQIP------VGISDTADANTPTTEGEGQYGPTVNPE 883

Query: 282 SKPTSEEKIEPLEDDKQQEEEQIPEPQHEENNIQLIDDVPQIS 324
           +  +S E  E ++    QEEE+I     E N   L   +  +S
Sbjct: 884 AGVSSGENGETVKGTNGQEEEEIHPQDGELNATALSSSLGNVS 926



>EAY10138.1 on XP_818892   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 956

 Score = 27.7 bits (60), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 41/103 (39%), Gaps = 9/103 (8%)

Query: 225 NSGNNSFKNLPNINTFTKNAGTSPRIPEQPKVEQPITVIVDDTIP---GNREIAPISLPD 281
           +S +N    +  +   TK    SP+IP        I+   D   P   G  +  P   P+
Sbjct: 830 DSSSNGNPAVGTVGGDTKQGNGSPQIP------VGISDTADANTPTTEGEGQYGPTVNPE 883

Query: 282 SKPTSEEKIEPLEDDKQQEEEQIPEPQHEENNIQLIDDVPQIS 324
           +  +S E  E ++    QEEE+I     E N   L   +  +S
Sbjct: 884 AGVSSGENGETVKGTNGQEEEEIHPQDGELNATALSSSLGNVS 926



>EAY10138.1 on XP_845637  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 499

 Score = 26.9 bits (58), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 725 LQDVIKEDVKKQLQEMKKEVNDAV-ILVDNKIDRTFVEKMFNKFRVVIKEL 774
           L    KED+K  L++ + +  D     +DN ID+ F +K  +  R +IK+L
Sbjct: 278 LDGKAKEDLKDLLKQAEGKTADLTPTEIDNAIDKYFGKKDSDGKRGIIKQL 328



>EAY10138.1 on XP_821078   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 940

 Score = 26.9 bits (58), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 47/118 (39%), Gaps = 16/118 (13%)

Query: 225 NSGNNSFKNLPNINTFTKNAGTSPRIPEQPKVEQPITVIVDDTIP---GNREIAPISLPD 281
           +S +N    +  +   T     SP+IP        I+   D   P   G  +  P   P+
Sbjct: 814 DSSSNGNPAVGTVGGDTTQGNGSPQIP------VGISDTADANTPTTEGEGQDGPTLNPE 867

Query: 282 SKPTSEEKIEPLEDDKQQEEEQIPEPQHEENNIQLIDDVPQIS------TQELRESMI 333
           +  +S E  EP E+   QEEE  P+   + N   L  +V  +S         +RES +
Sbjct: 868 AGASSGESGEPTEEANGQEEEVQPQ-DGDVNTTALSSNVGNVSQGHNSDAGSMRESGL 924



>EAY10138.1 on XP_807549   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 894

 Score = 26.6 bits (57), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 8/70 (11%)

Query: 421 VNQDNQDNLSNNLMRINAAHNSKETQLVAQLRNVQDDIEN----LSVKVNDSISQLQRKM 476
           V+ D++D  +++L+  +A    ++ +L+A   N + D E     +SV++ D   QLQR +
Sbjct: 417 VSGDDEDAAASSLLYKSAEGEDRKEELIALYENKKGDEEKSLGMVSVRLTD---QLQR-V 472

Query: 477 VSLLATTNDI 486
             +LAT N +
Sbjct: 473 KDVLATWNKV 482




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10141.1 surface antigen BspA-like [Trichomonas
vaginalis G3]
         (344 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10142.1 surface antigen Bsp, putative [Trichomonas
vaginalis G3]
         (612 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001349740  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   3.0  

>EAY10142.1 on XP_001349740  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3346

 Score = 27.3 bits (59), Expect = 3.0,   Method: Composition-based stats.
 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 7/43 (16%)

Query: 560  FCGSPTFHKTSNICSDIIETNFVGVDIFKKQMKNEMITHTSFL 602
            FC  P      N C D   TN VGV++  K+M+     H S L
Sbjct: 2259 FCNVP-----PNPCGDKDATNVVGVEVLAKEMQEA--AHKSML 2294




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10145.1 surface antigen BspA-like [Trichomonas
vaginalis G3]
         (150 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001349031  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   3.7  

>EAY10145.1 on XP_001349031  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2275

 Score = 24.3 bits (51), Expect = 3.7,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 23/37 (62%)

Query: 102  KSTSAFVQMVQQAGLDLRSQLHCSQFSCKQNSIYSFS 138
            K+T+  V+M+ + G  ++  L+ SQ S K N +++ S
Sbjct: 1464 KTTTITVEMIDRRGPFIKEYLNNSQKSEKSNDLFNAS 1500




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10146.1 Leucine Rich Repeat family protein
[Trichomonas vaginalis G3]
         (583 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_820795   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   5.0  
CAB92983  SBP1  (Others)  [Plasmodium falciparum]                      26   5.3  

>EAY10146.1 on XP_820795   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 782

 Score = 26.6 bits (57), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 143 YIGSLHTITFSKGSQLKELVFNAFLVTKFTSFEVPENITKISGVAFSGV 191
           + GS+  ++ + GS  K+  +    V   T FE  E++T++ G   SGV
Sbjct: 223 FFGSVGRVS-NDGSSGKKFYWKDAFVISLTDFEKHESLTRLIGGGGSGV 270



>EAY10146.1 on CAB92983  SBP1  (Others)  [Plasmodium falciparum]
          Length = 391

 Score = 26.2 bits (56), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 22/116 (18%)

Query: 337 SNKKLFINISEKSKYNIDKQLI---------------VLTKDNTSITQSLSSEANIKIPS 381
            N K +I  + KS YN + +LI                L++ N S+  ++  + N K+P 
Sbjct: 138 DNNKNYIESNYKSTYNNNPELIHSTDFIGSNNNHTFNFLSRYNNSVLNNM--QGNTKVPG 195

Query: 382 KVRIIKAAAFAKSQSLTTISFDEDTELNEIENGAFEDCTKLTSFYFGSKLQTINAK 437
            V  +KA  F++ ++ T +   E+   N +     E C ++     G  + ++N K
Sbjct: 196 NVPELKARIFSEEEN-TEVESAENNHTNSL--NPNESCDQI--IKLGDIINSVNEK 246




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10150.1 hypothetical protein TVAG_088650 [Trichomonas
vaginalis G3]
         (447 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351080  PfEMP1  (Establishment)  [Plasmodium falciparum]         29   0.71 

>EAY10150.1 on XP_001351080  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2209

 Score = 28.9 bits (63), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 9/66 (13%)

Query: 202  NYIFEKVHKGETSPVDEFIRIIRESKMYPKLILRDYTHVSFLIDNINENTYGCILLLGKC 261
            N ++EK+ KGE    D+F+R     +M+    L DY  + F  D  N+N Y  IL   K 
Sbjct: 1006 NDLYEKLKKGEIP--DDFLR-----QMF--YTLADYKDILFSGDKDNKNGYNDILSGDKE 1056

Query: 262  ITHHQK 267
            +   +K
Sbjct: 1057 LHEREK 1062




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10152.1 CAMK family protein kinase [Trichomonas
vaginalis G3]
         (315 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    56   6e-10
XP_808062   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.16 
XP_805883   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   2.7  
XP_829792  VSG  (Establishment)  [Trypanosoma brucei]                  25   5.7  

>EAY10152.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 56.2 bits (134), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 56/105 (53%), Gaps = 1/105 (0%)

Query: 100 LTEEATRRLVHDVIACLKVCHDRNIVHVDIKPSNFLFDNYGRV-KLCDFGLSKMYQDLPS 158
           LT +  +  ++ ++  +  CH + I+H DIKP N + D+  ++ +L D+GL++ Y     
Sbjct: 144 LTIQDIKYYIYQLLKAMNYCHSQGIMHRDIKPHNVMIDHEKKILRLIDWGLAEFYHPEQE 203

Query: 159 SYTFHGTKHFMAPEIFQHRQFNPIIADIWALGVTIYYMVTQQYPF 203
                 T+++  PE+    ++     DIW++G  +  ++ ++ PF
Sbjct: 204 YSVRVATRYYKGPELLVDMRYYDYSLDIWSIGCMLAGIIFKKEPF 248



>EAY10152.1 on XP_808062   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 825

 Score = 30.4 bits (67), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 21/93 (22%), Positives = 45/93 (48%), Gaps = 9/93 (9%)

Query: 38  QYFAVKKIPKENFNCAEIHCLIEINDPKVCNLYQYFKFSDHYYLLMEYCDTDLAQKLKQV 97
           + + V  + +EN + A    L++ N+ ++ +LY+  K    Y L+       L +KL++V
Sbjct: 398 RVYDVGPVSRENDDAAASSLLMKDNNEELISLYENKKSDGSYSLVA----VRLTEKLERV 453

Query: 98  EKLTEEATRRLVHDVIACLKVCHDRNIVHVDIK 130
           +++          D+ + L+ C   + V VD +
Sbjct: 454 KEVV-----NTWKDLDSALQSCSSGSSVTVDTR 481



>EAY10152.1 on XP_805883   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1038

 Score = 26.2 bits (56), Expect = 2.7,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 9/89 (10%)

Query: 40  FAVKKIPKENFNCAEIHCLIEINDPKVCNLYQYFKFSDHYYLLMEYCDTDLAQKLKQVEK 99
           + V ++ +EN + A    LI+ N+ ++ +LY+  K SD  Y L+    T+  +++K+V K
Sbjct: 402 YDVGQVSRENDDAAASSLLIKDNNNELISLYEN-KKSDGSYNLVAVRLTEKLERVKEVVK 460

Query: 100 LTEEATRRLVHDVIACLKVCHDRNIVHVD 128
             +        D+ + LK C   +   VD
Sbjct: 461 TWK--------DLDSALKTCRSGSSGTVD 481



>EAY10152.1 on XP_829792  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 514

 Score = 25.4 bits (54), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 10/43 (23%), Positives = 22/43 (51%)

Query: 209 KFLQFNIEKGKYNADLVQNSLLRDLIARCLEKNPQKRATVDEL 251
           K  + +     +N       +L+DL+++C + +P+  AT  E+
Sbjct: 243 KLCESSQSSTAFNPSSTPEQVLKDLLSKCPQPSPKTPATAAEV 285




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10153.1 hypothetical protein TVAG_088680 [Trichomonas
vaginalis G3]
         (331 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001350415  PfEMP1  (Establishment)  [Plasmodium falciparum]         30   0.31 
XP_001349522  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   5.8  
XP_001609533  variant erythrocyte surface antigen-1, alpha subun...    25   7.4  
XP_001351564  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   8.6  

>EAY10153.1 on XP_001350415  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3056

 Score = 29.6 bits (65), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 13/96 (13%)

Query: 89  INNLEKI-IDSLRTKYKIGPTYLSDIVLSYNRLSDLAADLQENPESKDFSNQASTCLYYL 147
           INNLEK+ +D +R K+     +L+D++L+     +       +  S +  N        +
Sbjct: 106 INNLEKLNVDKIRDKH----AFLADVLLTARNEGERIVQNHPDTNSSNVCNALERSFADI 161

Query: 148 MEKIDNMWKETNQKTNLWNKTNSNLRKTTEKVIAEL 183
            + I        + T+LW  TNSNL +  +++ A++
Sbjct: 162 ADII--------RGTDLWKGTNSNLEQNLKQMFAKI 189



>EAY10153.1 on XP_001349522  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 355

 Score = 25.0 bits (53), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 14/74 (18%)

Query: 235 DFEKDMMNRRKKELAASYQTISLTF---------QPMKQLEIEHAENKRLTALYRASLMS 285
           D   +M  R++KEL  +  T ++TF          P+ +  IEH E+     L      S
Sbjct: 218 DIYDEMPKRKEKELFGTKHTKNITFNRVATQTYSDPIDKWTIEHNED-----LLDIPSSS 272

Query: 286 KEDLENLKKENENL 299
            +D+  +K E  N+
Sbjct: 273 HDDILKIKDETYNI 286



>EAY10153.1 on XP_001609533  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1162

 Score = 25.0 bits (53), Expect = 7.4,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 16/98 (16%)

Query: 21  DEEAYNSIKSIVKKAK--IDSVIAKIQNFL------------AISEESKSIDEKEAAKIK 66
           D+EA N++K+ ++KAK  ++  + K+   L            A++     I  +   K++
Sbjct: 661 DKEAINAVKTALEKAKGELEEAVKKVNGGLDVKLGEAKTALEALTNGGSGILGEVGEKLE 720

Query: 67  SAIAGLRD--YLSTSNLANNFAANINNLEKIIDSLRTK 102
           +A  G  D      S   N     +  LEK+I  L+ K
Sbjct: 721 TATNGEYDPGKNKISESINKVREVLKELEKVIKELKKK 758



>EAY10153.1 on XP_001351564  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2207

 Score = 25.0 bits (53), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 3/29 (10%)

Query: 296  NENLKQIIKELEQSIE---NQKNSAPPTP 321
            +E  KQ +KE++Q I+    Q  + PPTP
Sbjct: 1084 DEKDKQKMKEIQQKIDKILKQSGTTPPTP 1112




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10155.1 hypothetical protein TVAG_088700 [Trichomonas
vaginalis G3]
         (271 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001611736  variant erythrocyte surface antigen-1, alpha subun...    29   0.41 
XP_001611901  variant erythrocyte surface antigen-1, alpha subun...    25   6.7  

>EAY10155.1 on XP_001611736  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1365

 Score = 28.9 bits (63), Expect = 0.41,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 5/50 (10%)

Query: 180 CCYHGAIGCFNFLLSEFKADITYQCLCLSFLGGNPGIISE-CLKYRDPGE 228
           CC HG  GC    + E + ++  +C C+   GG+   +   C K +D G+
Sbjct: 186 CCSHGGKGC--KYIDELEKNLCNECECIK--GGSSSHLGRGCTKCKDSGD 231



>EAY10155.1 on XP_001611901  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1211

 Score = 25.0 bits (53), Expect = 6.7,   Method: Composition-based stats.
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 100 FVYKEYGILFNEKKCKLFKWYDSLKLSTNVHKYGSIYK 137
           FV+  +   FNE+   +FK   S    TN HK G+I+K
Sbjct: 413 FVHTAHRDSFNEQAI-VFKNDGSSTTDTNQHKIGAIFK 449




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10156.1 ankyrin repeat protein, putative [Trichomonas
vaginalis G3]
         (192 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_845635  VSG  (Establishment)  [Trypanosoma brucei]                  23   9.3  

>EAY10156.1 on XP_845635  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 487

 Score = 23.5 bits (49), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 2/67 (2%)

Query: 53  LLGVNDNSIGIQEKKLLYTAIHENNEYIVKTLISL--GCDINERDHMQWTPLQYAAFVNS 110
           L G   +  G  EKK + T     N   + T+I+L    DI +   M+ TP +     NS
Sbjct: 312 LFGEAKDHQGSDEKKAIETVFSNTNVDTINTIITLIEKEDIPKGAAMRQTPTKLEDIKNS 371

Query: 111 DRVADIL 117
             + ++L
Sbjct: 372 IELTNLL 378




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10160.1 hypothetical protein TVAG_088750 [Trichomonas
vaginalis G3]
         (262 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001608795  variant erythrocyte surface antigen-1, alpha subun...    27   1.2  

>EAY10160.1 on XP_001608795  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1323

 Score = 27.3 bits (59), Expect = 1.2,   Method: Composition-based stats.
 Identities = 8/17 (47%), Positives = 11/17 (64%)

Query: 157  GKPSEEPEDFIFSWCAA 173
            G PS +P D+   WCA+
Sbjct: 998  GNPSTKPNDYFCGWCAS 1014




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10166.1 hypothetical protein TVAG_088810 [Trichomonas
vaginalis G3]
         (138 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_807772   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   4.5  
XP_814441   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   6.5  

>EAY10166.1 on XP_807772   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 852

 Score = 23.9 bits (50), Expect = 4.5,   Method: Composition-based stats.
 Identities = 7/26 (26%), Positives = 13/26 (50%)

Query: 22  HFGTKQYAIITTSTFDNPPKVYPFDI 47
           HF    + ++ T + D  P+  PF +
Sbjct: 573 HFANYNFTLVATVSIDGEPRESPFPL 598



>EAY10166.1 on XP_814441   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 931

 Score = 23.5 bits (49), Expect = 6.5,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 4/37 (10%)

Query: 56  KKSALGSYHTSDIRRWSSSFYVSPNDVNFLNKRRKEE 92
           ++ ALG+  +++I    S FY+  + VN  NK  +EE
Sbjct: 670 EECALGNGASNEI----SHFYIGGDGVNAANKEGREE 702




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10169.1 hypothetical protein TVAG_088840 [Trichomonas
vaginalis G3]
         (346 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAR88085  TbcatB  (Cysteine proteases)  [Trypanosoma brucei]           26   4.1  

>EAY10169.1 on AAR88085  TbcatB  (Cysteine proteases)  [Trypanosoma brucei]
          Length = 340

 Score = 25.8 bits (55), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 9/13 (69%), Positives = 9/13 (69%)

Query: 143 VSDYCIPYPIPEI 155
           VSDYC PYP P  
Sbjct: 180 VSDYCQPYPFPHC 192




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10170.1 hypothetical protein TVAG_088850 [Trichomonas
vaginalis G3]
         (179 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_805259   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.048
XP_810529   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.099
XP_813585   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   0.14 
XP_817333   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   1.6  
XP_821526   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   2.1  
XP_818963   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   8.2  

>EAY10170.1 on XP_805259   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 800

 Score = 30.4 bits (67), Expect = 0.048,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 1/73 (1%)

Query: 17  PRRHVRVPYYELNAEDELIGCGHKTSTEDLPMEIG-DHQSRLNSQKRHFANFAGLKSFLR 75
           P   +R+ Y   N  + +   G KT+TE  P E G ++Q  L  Q    + +   KS   
Sbjct: 583 PEYFMRLSYTADNKWETMFKGGKKTTTESRPWEAGKEYQVALMLQSNKTSVYIDGKSLGE 642

Query: 76  TNYPLLAEKEIKL 88
              PL  E  ++L
Sbjct: 643 EELPLTGETPLEL 655



>EAY10170.1 on XP_810529   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 791

 Score = 29.6 bits (65), Expect = 0.099,   Method: Composition-based stats.
 Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 9/77 (11%)

Query: 17  PRRHVRVPYYELNAEDELIGCGHKTSTEDLPMEIG-DHQSRLNSQKRHFANFAGLKSFLR 75
           P   +R+ Y   N    ++    K +TE  P E G +HQ  L  Q        G K+ + 
Sbjct: 602 PEYFMRLSYTADNKWMTMLKDEKKPTTESRPWEAGKEHQVALMLQ--------GNKASVY 653

Query: 76  TNYPLLAEKEIKLNGEK 92
            +  LL E+E+ L GEK
Sbjct: 654 VDGELLGEEEVPLTGEK 670



>EAY10170.1 on XP_813585   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 800

 Score = 29.3 bits (64), Expect = 0.14,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 4/101 (3%)

Query: 17  PRRHVRVPYYELNAEDELIGCGHKTSTEDLPMEIG-DHQSRLNSQKRHFANFAGLKSFLR 75
           P   +R+ Y      + +   G KT+TE  P E G ++Q  L  Q    + +   KS   
Sbjct: 584 PEYFMRLSYTADKKWETMFKGGKKTTTESRPWEAGKEYQVALMLQGNKASVYIDGKSLGE 643

Query: 76  TNYPLLAEKEIKLNGEKIFGTQIKDMNGHKYVAIEFISAKP 116
              PL  E  ++L G   F     D++G +    + I  KP
Sbjct: 644 EETPLTGETPLELFG---FCFGACDIDGDEKANPKEIGKKP 681



>EAY10170.1 on XP_817333   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1037

 Score = 25.8 bits (55), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 10/83 (12%)

Query: 73  FLRTNYPLLAE---KEIKLNGEKI--FGTQIKDMNGHKYVAIEFISAK-----PNGSGLD 122
           F  T + L+A     E+  +G  I   G ++ D +      + +   K     P G+G  
Sbjct: 555 FANTEFTLVATVSIHEVPQSGSSIPLVGVRMNDTDSTVLFGLSYTHDKKWLAIPEGAGDA 614

Query: 123 ADMVKGYIDFGYQALTKIKYIEY 145
            D V+   +  YQ + K+ Y+E+
Sbjct: 615 EDFVEWKPNRTYQVVLKMNYVEW 637



>EAY10170.1 on XP_821526   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 983

 Score = 25.4 bits (54), Expect = 2.1,   Method: Composition-based stats.
 Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 5/44 (11%)

Query: 9   LRESRLVRPRRHVRVPYYELNAEDELIGCGHKTSTEDLPMEIGD 52
           +R  RL+RP   V+   YE+NA   L+G G+ TS   L  E+GD
Sbjct: 154 VRIDRLLRPTAIVKEYGYEINA---LVG-GYHTSGAPLK-EVGD 192



>EAY10170.1 on XP_818963   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1055

 Score = 23.9 bits (50), Expect = 8.2,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 7/42 (16%)

Query: 86  IKLNGEKIFGTQIKDMNGHKYVAIEFISAKP------NGSGL 121
           + L  EK+FG+++ ++N  K V I  + A+       NG+GL
Sbjct: 702 VMLYNEKLFGSELYELNASK-VTIPSLGAEKQPTGPVNGTGL 742




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10176.1 hypothetical protein TVAG_088920 [Trichomonas
vaginalis G3]
         (647 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_805896   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   6.4  

>EAY10176.1 on XP_805896   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 692

 Score = 26.2 bits (56), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 26/130 (20%), Positives = 51/130 (39%), Gaps = 15/130 (11%)

Query: 317 NKTIDKGIKIRGSGIYSEDFSINCSIGDINSIFDGTLTKNAATHSFTFSGSCFIPNSIVE 376
           N T+  G+    SG+  +       +GD+        T N     FT S + FI + + +
Sbjct: 496 NATVGSGVTSTESGVALKGAGAEWPVGDMGQTVPYYFTNN----KFTLSATVFI-HEVPK 550

Query: 377 ENKYSVTVWGITINSGETTSLQSKEFYFYRNYPVIIISDTIKDTYFHKNDISISVSGYVS 436
                V + G  +N  ++T L    +   RN+   +          HK +  +  SG V 
Sbjct: 551 AGSIPVPLIGARLNDTDSTVLFQLSYTSERNWKFTL----------HKKEFLVKPSGDVG 600

Query: 437 DQDGDDEVEI 446
           + + +  +++
Sbjct: 601 NWETNTAIQV 610




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10181.1 AGC family protein kinase [Trichomonas
vaginalis G3]
         (456 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    41   7e-05
AAL15426  MSA-2a2  (Invasion)  [Babesia bovis]                         28   1.2  
AAL15425  MSA-2a1  (Invasion)  [Babesia bovis]                         27   2.3  

>EAY10181.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 41.2 bits (95), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 34/130 (26%)

Query: 200 RFFAGEIVLALHYIHQLGYVHSDVKPDNILINSDGHI-KLTDFGIASSYNKVDNDYNNLL 258
           +++  +++ A++Y H  G +H D+KP N++I+ +  I +L D+G+A  Y           
Sbjct: 150 KYYIYQLLKAMNYCHSQGIMHRDIKPHNVMIDHEKKILRLIDWGLAEFY----------- 198

Query: 259 INSQDLLIDSSSIVSTANNRHHRQRSSI-VGTIDYVAPEVILG-EAPSVESDWWSFGVIL 316
                               H  Q  S+ V T  Y  PE+++         D WS G +L
Sbjct: 199 --------------------HPEQEYSVRVATRYYKGPELLVDMRYYDYSLDIWSIGCML 238

Query: 317 YEFLYGFTPF 326
              ++   PF
Sbjct: 239 AGIIFKKEPF 248



>EAY10181.1 on AAL15426  MSA-2a2  (Invasion)  [Babesia bovis]
          Length = 281

 Score = 27.7 bits (60), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 9/75 (12%)

Query: 62  ALDSINATEEEKQQLLQEFHQEGSQFTRLQRQRLRPENFNYIKLIGRGGFADVWLVTDK- 120
           +L S++A+EE +  L    H E  Q     +   + EN  Y++    G F +V L +D  
Sbjct: 15  SLLSVSASEESQDTLSTTLHDEMKQAANYIKFLTKQENREYLE----GKFKEVNLPSDSS 70

Query: 121 ----NAQIYALKIIR 131
               NA +Y L   R
Sbjct: 71  PDALNAFVYILDFFR 85



>EAY10181.1 on AAL15425  MSA-2a1  (Invasion)  [Babesia bovis]
          Length = 311

 Score = 26.9 bits (58), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 9/75 (12%)

Query: 62  ALDSINATEEEKQQLLQEFHQEGSQFTRLQRQRLRPENFNYIKLIGRGGFADVWLVTDK- 120
           +L S++A+EE +  L    H E  Q     +   + EN  Y++    G F +V L +D  
Sbjct: 15  SLLSVSASEESQDTLSTTLHDEMKQVANYIKFLTKQENREYLE----GKFKEVNLPSDSS 70

Query: 121 ----NAQIYALKIIR 131
               NA +Y L   R
Sbjct: 71  PDALNAFVYILDFFR 85




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10182.1 hypothetical protein TVAG_118340 [Trichomonas
vaginalis G3]
         (193 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_820135   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           31   0.034
XP_820186   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   0.16 
XP_001350410  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   0.99 
XP_813237   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.2  
XP_814246   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   2.1  
XP_804106   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   3.3  
XP_808957   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   4.6  
XP_813188   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   5.5  
XP_001348176  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   8.1  
XP_817994   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   8.4  
XP_807433   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   8.4  

>EAY10182.1 on XP_820135   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1519

 Score = 31.2 bits (69), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 6/87 (6%)

Query: 32  QNNIEKHEEEPKEEIISDEERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDDESKSST 90
           Q + E    EPK    S E + TE +  EPK  E  S E K ++ +  EPK   E KS+ 
Sbjct: 738 QKSAEPKPAEPK----SAEPKPTEPKSAEPKPAEPKSAEPKPAEPKPAEPK-PAEPKSAE 792

Query: 91  KSYSQSKPDDMSDNDSKDNESSKSEEK 117
              ++ KP +    + K  E   +E K
Sbjct: 793 PKPAEPKPAEPKSAEPKPAEPKSAEPK 819




 Score = 29.6 bits (65), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 6/96 (6%)

Query: 41   EPKE-EIISDEERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDD----ESKSSTKSYS 94
            EPK  E  S E +  E +  EPK  E  S E K ++ +  EPK  +    E KS+    +
Sbjct: 992  EPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKSAEPKPA 1051

Query: 95   QSKPDDMSDNDSKDNESSKSEEKTKRRRRRKQNKDE 130
            + KP +    + K  ES  +E+K+   +  +Q   E
Sbjct: 1052 EPKPAEPKPAEQKSAESKPAEQKSAESKPAEQKSAE 1087




 Score = 28.9 bits (63), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 9/87 (10%)

Query: 41   EPKE-EIISDEERDTEKRKTEPKDESISDEEKDSDKRKVEPKDDD----ESKSSTKSYSQ 95
            EPK  E  S E +  E +  EPK    S E K ++ +  EPK  +    ESK + +  ++
Sbjct: 1022 EPKPAEPKSAEPKPAEPKSAEPK----SAEPKPAEPKPAEPKPAEQKSAESKPAEQKSAE 1077

Query: 96   SKPDDMSDNDSKDNESSKSEEKTKRRR 122
            SKP +    +SK  E   +E K   ++
Sbjct: 1078 SKPAEQKSAESKPAEPKSAEPKPAEQK 1104




 Score = 28.5 bits (62), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 6/87 (6%)

Query: 32   QNNIEKHEEEPKEEIISDEERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDDESKSST 90
            Q + E    EPK    S E +  E +  EPK  E  S E K ++ +  EPK  +   +  
Sbjct: 1238 QKSAEPKPAEPK----SAEPKPAEPKSAEPKPAEQKSAEFKPAEPKPAEPKSAEPKPAEP 1293

Query: 91   KSYSQSKPDDMSDNDSKDNESSKSEEK 117
            KS ++ KP +    +SK  E   +E K
Sbjct: 1294 KS-AEPKPAEQKSAESKPAEPKPAEPK 1319




 Score = 28.1 bits (61), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 3/80 (3%)

Query: 41  EPKE-EIISDEERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDDESKSSTKSYSQSKP 98
           EPK  E  S E +  E +  EPK  E  S E K ++ +  EPK   E KS+    ++ KP
Sbjct: 912 EPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPK-PAEPKSAEPKPAEPKP 970

Query: 99  DDMSDNDSKDNESSKSEEKT 118
            +    + K  E   +E K+
Sbjct: 971 AEPKPAEPKSAEPKPAEPKS 990




 Score = 28.1 bits (61), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 3/86 (3%)

Query: 34  NIEKHEEEPKE-EIISDEERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDDESKSSTK 91
           + E    EPK  E  S E +  E++  EPK  E  S E K ++ +  EPK   E KS+  
Sbjct: 715 SAEPKPAEPKPAEPKSAEPKPAEQKSAEPKPAEPKSAEPKPTEPKSAEPK-PAEPKSAEP 773

Query: 92  SYSQSKPDDMSDNDSKDNESSKSEEK 117
             ++ KP +    + K  E   +E K
Sbjct: 774 KPAEPKPAEPKPAEPKSAEPKPAEPK 799




 Score = 27.7 bits (60), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 6/83 (7%)

Query: 41  EPKE-EIISDEERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDD----ESKSSTKSYS 94
           EPK  E  S E +  E +  EPK  E  S E K ++ +  EPK  +    E KS+    +
Sbjct: 817 EPKPAEPKSAEPKPAEPKSAEPKPTEPKSAEPKPAEPKPAEPKSAEPKPTEPKSAGPKPA 876

Query: 95  QSKPDDMSDNDSKDNESSKSEEK 117
           + KP +    + K  E   +E K
Sbjct: 877 EPKPAEPKSAEPKPAEPKSAEPK 899




 Score = 27.7 bits (60), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 3/79 (3%)

Query: 41  EPKE-EIISDEERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDDESKSSTKSYSQSKP 98
           EPK  E  S E +  E +  EPK  E  S E K ++ +  EPK  +   +  KS ++ KP
Sbjct: 762 EPKPAEPKSAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKSAEPKPAEPKS-AEPKP 820

Query: 99  DDMSDNDSKDNESSKSEEK 117
            +    + K  E   +E K
Sbjct: 821 AEPKSAEPKPAEPKSAEPK 839




 Score = 27.7 bits (60), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 3/89 (3%)

Query: 41   EPKE-EIISDEERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDDESKSSTKSYSQSKP 98
            EPK  E  S E +  E +  EPK  E    E+K ++ +  EPK   E KS+    ++ KP
Sbjct: 1327 EPKPAEPKSAEPKSAEPKPAEPKSAEPKPAEQKSAEPKTAEPK-PAEPKSAEPKPAEPKP 1385

Query: 99   DDMSDNDSKDNESSKSEEKTKRRRRRKQN 127
             +    + K  E   +E K+   +  + N
Sbjct: 1386 AEPKPAEPKSAEPKPAEPKSAEPKPAEPN 1414




 Score = 26.9 bits (58), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 3/80 (3%)

Query: 41  EPKE-EIISDEERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDDESKSSTKSYSQSKP 98
           EPK  E  S E +  E +  EPK  E  S E K ++ +  EPK  +   +  KS ++ KP
Sbjct: 807 EPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPTEPKSAEPKPAEPKPAEPKS-AEPKP 865

Query: 99  DDMSDNDSKDNESSKSEEKT 118
            +      K  E   +E K+
Sbjct: 866 TEPKSAGPKPAEPKPAEPKS 885




 Score = 26.9 bits (58), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%)

Query: 50  EERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDDESKSSTKSYSQSKPDDMSDNDSKD 108
           E +  E + TEPK  E    E K ++ +  EPK  +   +  KS ++ KP +    + K 
Sbjct: 747 EPKSAEPKPTEPKSAEPKPAEPKSAEPKPAEPKPAEPKPAEPKS-AEPKPAEPKPAEPKS 805

Query: 109 NESSKSEEKT 118
            E   +E K+
Sbjct: 806 AEPKPAEPKS 815




 Score = 26.6 bits (57), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 3/79 (3%)

Query: 41  EPKE-EIISDEERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDDESKSSTKSYSQSKP 98
           EPK  E  S E +  E +  EPK  E  S E K ++ +  EPK  +   +  KS ++ KP
Sbjct: 877 EPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKSAEPKPAEPKSAEPKPAEPKS-AEPKP 935

Query: 99  DDMSDNDSKDNESSKSEEK 117
            +    + K  E   +E K
Sbjct: 936 AEPKSAEPKPAEPKSAEPK 954




 Score = 26.6 bits (57), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 6/92 (6%)

Query: 32   QNNIEKHEEEPKEEIISDEERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDDESKSST 90
            Q + E    EPK    S E +  E++  EPK  E  S E K ++ +  EPK   E KS+ 
Sbjct: 1218 QKSAESKPAEPK----SAEPKPAEQKSAEPKPAEPKSAEPKPAEPKSAEPK-PAEQKSAE 1272

Query: 91   KSYSQSKPDDMSDNDSKDNESSKSEEKTKRRR 122
               ++ KP +    + K  E   +E K   ++
Sbjct: 1273 FKPAEPKPAEPKSAEPKPAEPKSAEPKPAEQK 1304




 Score = 26.2 bits (56), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 3/80 (3%)

Query: 41  EPKE-EIISDEERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDDESKSSTKSYSQSKP 98
           EPK  E  S E +  E +  EPK  E    E K ++ +  EPK  +   +  KS ++ KP
Sbjct: 782 EPKPAEPKSAEPKPAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKS-AEPKP 840

Query: 99  DDMSDNDSKDNESSKSEEKT 118
            +    + K  E   +E K+
Sbjct: 841 TEPKSAEPKPAEPKPAEPKS 860




 Score = 26.2 bits (56), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 8/98 (8%)

Query: 24   YKKNKNKP--QNNIEKHEEEPK-EEIISDEERDTEKRKTEPKDESISDEEKDSDKRKVEP 80
            +K  + KP    + E    EPK  E    E++  E +  EPK      E K ++ +  EP
Sbjct: 1273 FKPAEPKPAEPKSAEPKPAEPKSAEPKPAEQKSAESKPAEPKP----AEPKPAEPKPAEP 1328

Query: 81   KDDDESKSSTKSYSQSKPDDMSDNDSKDNESSKSEEKT 118
            K   E KS+    ++ KP +    + K  E   +E KT
Sbjct: 1329 K-PAEPKSAEPKSAEPKPAEPKSAEPKPAEQKSAEPKT 1365




 Score = 26.2 bits (56), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 3/79 (3%)

Query: 34  NIEKHEEEPKE-EIISDEERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDDESKSSTK 91
           + E    EPK  E  S E +  E +  EPK  E  S E K ++ +  EPK   E KS+  
Sbjct: 790 SAEPKPAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPK-PTEPKSAEP 848

Query: 92  SYSQSKPDDMSDNDSKDNE 110
             ++ KP +    + K  E
Sbjct: 849 KPAEPKPAEPKSAEPKPTE 867




 Score = 26.2 bits (56), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 10/92 (10%)

Query: 50   EERDTEKRKTEPKD------ESISDEEKDSDKRKVEPKDDD----ESKSSTKSYSQSKPD 99
            E++  E + TEPK       E  S E K ++ +  EPK       E K +    ++ KP 
Sbjct: 1152 EQKSAEPKPTEPKSAGPKPAEQKSAESKPAEPKPAEPKPAGPKPAEPKPAEPKPAEPKPA 1211

Query: 100  DMSDNDSKDNESSKSEEKTKRRRRRKQNKDED 131
                 + K  ES  +E K+   +  +Q   E 
Sbjct: 1212 GPKPAEQKSAESKPAEPKSAEPKPAEQKSAEP 1243




 Score = 25.8 bits (55), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 6/96 (6%)

Query: 41   EPKE-EIISDEERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDD----ESKSSTKSYS 94
            EPK  E  S E +  E +  EPK  E  S E K ++ +  EPK  +    E K +    +
Sbjct: 972  EPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSA 1031

Query: 95   QSKPDDMSDNDSKDNESSKSEEKTKRRRRRKQNKDE 130
            + KP +    + K  E   +E K    +  +Q   E
Sbjct: 1032 EPKPAEPKSAEPKSAEPKPAEPKPAEPKPAEQKSAE 1067




 Score = 25.8 bits (55), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 3/79 (3%)

Query: 41  EPKE-EIISDEERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDDESKSSTKSYSQSKP 98
           EPK  E  S E +  E +  EPK  E    E K ++ +  EPK  +   +  KS ++ KP
Sbjct: 897 EPKPAEPKSAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKS-AEPKP 955

Query: 99  DDMSDNDSKDNESSKSEEK 117
            +    + K  E   +E K
Sbjct: 956 AEPKSAEPKPAEPKPAEPK 974




 Score = 25.4 bits (54), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)

Query: 50   EERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDDESKSSTKSYSQSKPDDMSDNDSKD 108
            E++  E +  EPK  E  S E K ++ +  EPK   E KS+    ++ KP +    + K 
Sbjct: 1267 EQKSAEFKPAEPKPAEPKSAEPKPAEPKSAEPK-PAEQKSAESKPAEPKPAEPKPAEPKP 1325

Query: 109  NESSKSEEKT 118
             E   +E K+
Sbjct: 1326 AEPKPAEPKS 1335




 Score = 25.0 bits (53), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 2/72 (2%)

Query: 48   SDEERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDDESKSSTKSYSQSKPDDMSDNDS 106
            S E +  E +  EPK  E    E K ++ +  EPK  +   +  KS ++ KP +    + 
Sbjct: 1305 SAESKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKSAEPKPAEPKS-AEPKPAEQKSAEP 1363

Query: 107  KDNESSKSEEKT 118
            K  E   +E K+
Sbjct: 1364 KTAEPKPAEPKS 1375




 Score = 25.0 bits (53), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 43/105 (40%), Gaps = 18/105 (17%)

Query: 27  NKNK----PQNNIEKHEEEPKEEIISDEERDTEKRKTEPKD------ESISDEEKDSDKR 76
           N NK    P  + E    EPK    S E +  E +  EPK       E  S E K ++++
Sbjct: 684 NANKVTIPPPKSAEPKPAEPK----SAEPKPAEPKSAEPKPAEPKPAEPKSAEPKPAEQK 739

Query: 77  KVEPKDDD----ESKSSTKSYSQSKPDDMSDNDSKDNESSKSEEK 117
             EPK  +    E K +    ++ KP +    + K  E   +E K
Sbjct: 740 SAEPKPAEPKSAEPKPTEPKSAEPKPAEPKSAEPKPAEPKPAEPK 784




 Score = 25.0 bits (53), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 3/79 (3%)

Query: 41  EPKE-EIISDEERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDDESKSSTKSYSQSKP 98
           EPK  E  S E +  E +  EPK  E    E K ++ +  EPK  +   +  KS ++ KP
Sbjct: 887 EPKPAEPKSAEPKPAEPKSAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKS-AEPKP 945

Query: 99  DDMSDNDSKDNESSKSEEK 117
            +    + K  E   +E K
Sbjct: 946 AEPKSAEPKPAEPKSAEPK 964




 Score = 24.6 bits (52), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 2/71 (2%)

Query: 48   SDEERDTEKRKTEPKDESI-SDEEKDSDKRKVEPKDDDESKSSTKSYSQSKPDDMSDNDS 106
            S E +  E +  EPK       E K ++ +  EPK      +  KS ++SKP +    + 
Sbjct: 1175 SAESKPAEPKPAEPKPAGPKPAEPKPAEPKPAEPKPAGPKPAEQKS-AESKPAEPKSAEP 1233

Query: 107  KDNESSKSEEK 117
            K  E   +E K
Sbjct: 1234 KPAEQKSAEPK 1244




 Score = 24.6 bits (52), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 2/83 (2%)

Query: 50   EERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDDESKSSTKSYSQSKPDDMSDNDSKD 108
            E +  E +  EPK  E    E+K ++ +  EPK   E K +    ++ KP +    + K 
Sbjct: 1282 EPKSAEPKPAEPKSAEPKPAEQKSAESKPAEPK-PAEPKPAEPKPAEPKPAEPKSAEPKS 1340

Query: 109  NESSKSEEKTKRRRRRKQNKDED 131
             E   +E K+   +  +Q   E 
Sbjct: 1341 AEPKPAEPKSAEPKPAEQKSAEP 1363




 Score = 24.6 bits (52), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 6/92 (6%)

Query: 32   QNNIEKHEEEPK-EEIISDEERDTEKRKTEPKDESI-SDEEKDSDKRKVEPKDDD----E 85
            Q + E    EPK  E    E +  E +  EPK       E+K ++ +  EPK       E
Sbjct: 1113 QKSAESKPAEPKSAEPKPAEPKPAEPKPAEPKPAGPKPAEQKSAEPKPTEPKSAGPKPAE 1172

Query: 86   SKSSTKSYSQSKPDDMSDNDSKDNESSKSEEK 117
             KS+    ++ KP +      K  E   +E K
Sbjct: 1173 QKSAESKPAEPKPAEPKPAGPKPAEPKPAEPK 1204




 Score = 24.3 bits (51), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 3/79 (3%)

Query: 41  EPKE-EIISDEERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDDESKSSTKSYSQSKP 98
           EPK  E    E +  E +  EPK  E    E K ++ +  EPK  +   +  KS ++ KP
Sbjct: 772 EPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKSAEPKPAEPKSAEPKPAEPKS-AEPKP 830

Query: 99  DDMSDNDSKDNESSKSEEK 117
            +    + K  E   +E K
Sbjct: 831 AEPKSAEPKPTEPKSAEPK 849




 Score = 23.9 bits (50), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 3/80 (3%)

Query: 41  EPKE-EIISDEERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDDESKSSTKSYSQSKP 98
           EPK  E    E +  E +  EPK  E    E K ++ +  EPK  +   +  KS ++ KP
Sbjct: 792 EPKPAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPTEPKS-AEPKP 850

Query: 99  DDMSDNDSKDNESSKSEEKT 118
            +    + K  E   +E K+
Sbjct: 851 AEPKPAEPKSAEPKPTEPKS 870




 Score = 23.9 bits (50), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 2/69 (2%)

Query: 50   EERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDDESKSSTKSYSQSKPDDMSDNDSKD 108
            E +  E +  EPK  E    E K ++ +  EPK  +   +  KS ++ KP +    + K 
Sbjct: 937  EPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKPAEPKPAEPKS-AEPKPAEPKSAEPKP 995

Query: 109  NESSKSEEK 117
             E   +E K
Sbjct: 996  AEPKSAEPK 1004




 Score = 23.9 bits (50), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 2/69 (2%)

Query: 50   EERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDDESKSSTKSYSQSKPDDMSDNDSKD 108
            E +  E +  EPK  E    E K ++ +  EPK  +   +  KS ++ KP +    + K 
Sbjct: 947  EPKSAEPKPAEPKSAEPKPAEPKPAEPKPAEPKSAEPKPAEPKS-AEPKPAEPKSAEPKP 1005

Query: 109  NESSKSEEK 117
             E   +E K
Sbjct: 1006 AEPKSAEPK 1014




 Score = 23.9 bits (50), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 2/69 (2%)

Query: 50   EERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDDESKSSTKSYSQSKPDDMSDNDSKD 108
            E +  E +  EPK  E    E K ++ +  EPK  +   +  KS ++ KP +    + K 
Sbjct: 957  EPKSAEPKPAEPKPAEPKPAEPKSAEPKPAEPKSAEPKPAEPKS-AEPKPAEPKSAEPKP 1015

Query: 109  NESSKSEEK 117
             E   +E K
Sbjct: 1016 AEPKSAEPK 1024




 Score = 23.9 bits (50), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 2/69 (2%)

Query: 50   EERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDDESKSSTKSYSQSKPDDMSDNDSKD 108
            E +  E +  EPK  E    E K ++ +  EPK  +   +  KS ++ KP +    + K 
Sbjct: 967  EPKPAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKS-AEPKPAEPKSAEPKP 1025

Query: 109  NESSKSEEK 117
             E   +E K
Sbjct: 1026 AEPKSAEPK 1034




 Score = 23.9 bits (50), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 18/101 (17%)

Query: 34   NIEKHEEEPK-EEIISDEERDTEKRKTEPKD----------------ESISDEEKDSDKR 76
            + E    EPK  E  S E +  E +  EPK                 ES   E+K ++ +
Sbjct: 1030 SAEPKPAEPKSAEPKSAEPKPAEPKPAEPKPAEQKSAESKPAEQKSAESKPAEQKSAESK 1089

Query: 77   KVEPKDDDESKSSTKSYSQSKPDDMSDNDSKDNESSKSEEK 117
              EPK  +   +  KS ++SKP +    +SK  E   +E K
Sbjct: 1090 PAEPKSAEPKPAEQKS-AESKPAEQKSAESKPAEPKSAEPK 1129



>EAY10182.1 on XP_820186   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1133

 Score = 29.3 bits (64), Expect = 0.16,   Method: Composition-based stats.
 Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 2/90 (2%)

Query: 30  KPQNNIEKHEEEPKEEIISDEERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDDESKS 88
           +P+    K  E    E  S E +  E +  EPK  ES S E K ++ +  EPK   ESKS
Sbjct: 781 EPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAESKSAEPKPAEPKSAEPK-PAESKS 839

Query: 89  STKSYSQSKPDDMSDNDSKDNESSKSEEKT 118
           +    ++ K  +    + K  E   +E K+
Sbjct: 840 AEPKPAEPKSAEPKPAEPKSAEPKPAEPKS 869




 Score = 28.1 bits (61), Expect = 0.40,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 2/89 (2%)

Query: 30  KPQNNIEKHEEEPKEEIISDEERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDDESKS 88
           +P++   K  E    E    E +  E +  EPK  E    E K ++ +  EPK  +   +
Sbjct: 776 EPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAESKSAEPKPAEPKSAEPKPA 835

Query: 89  STKSYSQSKPDDMSDNDSKDNESSKSEEK 117
            +KS ++ KP +    + K  E   +E K
Sbjct: 836 ESKS-AEPKPAEPKSAEPKPAEPKSAEPK 863




 Score = 27.7 bits (60), Expect = 0.44,   Method: Composition-based stats.
 Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 3/85 (3%)

Query: 36  EKHEEEPK-EEIISDEERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDDESKSSTKSY 93
           E    EPK  E  S E +  E +  EPK  E  S E K ++ +  EPK   E KS+    
Sbjct: 776 EPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAESKSAEPK-PAEPKSAEPKP 834

Query: 94  SQSKPDDMSDNDSKDNESSKSEEKT 118
           ++SK  +    + K  E   +E K+
Sbjct: 835 AESKSAEPKPAEPKSAEPKPAEPKS 859




 Score = 27.7 bits (60), Expect = 0.51,   Method: Composition-based stats.
 Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 2/90 (2%)

Query: 30  KPQNNIEKHEEEPKEEIISDEERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDDESKS 88
           +P+    K  E    E  S E +  E +  EPK  E  S E K ++ +  EPK   ESKS
Sbjct: 831 EPKPAESKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPK-PAESKS 889

Query: 89  STKSYSQSKPDDMSDNDSKDNESSKSEEKT 118
           +    ++ K  +    + K  E   +E K+
Sbjct: 890 AGPKPAEPKSAEPKPAEPKSAEPKPAEPKS 919




 Score = 27.7 bits (60), Expect = 0.51,   Method: Composition-based stats.
 Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 3/87 (3%)

Query: 33   NNIEKHEEEPKE-EIISDEERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDDESKSST 90
            N+ E    EPK  E    E +  E +  EPK  E    E K ++ +  EPK  +   +  
Sbjct: 938  NSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEP 997

Query: 91   KSYSQSKPDDMSDNDSKDNESSKSEEK 117
            KS ++ KP +    + K  E   +E K
Sbjct: 998  KS-AEPKPAEPKSAEPKPAEPKSAEPK 1023




 Score = 27.3 bits (59), Expect = 0.59,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 2/89 (2%)

Query: 30  KPQNNIEKHEEEPKEEIISDEERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDDESKS 88
           +P++   K  E    E    E +  E +  EPK  E    E K ++ +  EPK  +   +
Sbjct: 796 EPKSAEPKPAEPKSAEPKPAESKSAEPKPAEPKSAEPKPAESKSAEPKPAEPKSAEPKPA 855

Query: 89  STKSYSQSKPDDMSDNDSKDNESSKSEEK 117
             KS ++ KP +    + K  E   +E K
Sbjct: 856 EPKS-AEPKPAEPKSAEPKPAEPKSAEPK 883




 Score = 26.9 bits (58), Expect = 0.74,   Method: Composition-based stats.
 Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 5/89 (5%)

Query: 30  KPQNNIEKHEEEPKEEIISDEERDTEKRKTEPKDESISDEEKDSDKRKVEPKDDDESKSS 89
           +P++   K  E    E    E +  E +  EPK    S E K ++ +  EPK   ESKS+
Sbjct: 766 EPKSAGPKPAEPKSAEPKPAEPKSAEPKPAEPK----SAEPKPAEPKSAEPK-PAESKSA 820

Query: 90  TKSYSQSKPDDMSDNDSKDNESSKSEEKT 118
               ++ K  +    +SK  E   +E K+
Sbjct: 821 EPKPAEPKSAEPKPAESKSAEPKPAEPKS 849




 Score = 26.6 bits (57), Expect = 1.0,   Method: Composition-based stats.
 Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 2/90 (2%)

Query: 30  KPQNNIEKHEEEPKEEIISDEERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDDESKS 88
           +P+    K  E    E  S E +  E +  EPK  E  S E K ++ +  EPK   E KS
Sbjct: 821 EPKPAEPKSAEPKPAESKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPK-PAEPKS 879

Query: 89  STKSYSQSKPDDMSDNDSKDNESSKSEEKT 118
           +    ++SK       + K  E   +E K+
Sbjct: 880 AEPKPAESKSAGPKPAEPKSAEPKPAEPKS 909




 Score = 26.6 bits (57), Expect = 1.0,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 2/89 (2%)

Query: 30  KPQNNIEKHEEEPKEEIISDEERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDDESKS 88
           +P++   K  E    E    E +  E +  EPK  E    E K ++ +  EPK  +   +
Sbjct: 826 EPKSAEPKPAESKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPA 885

Query: 89  STKSYSQSKPDDMSDNDSKDNESSKSEEK 117
            +KS +  KP +    + K  E   +E K
Sbjct: 886 ESKS-AGPKPAEPKSAEPKPAEPKSAEPK 913




 Score = 26.6 bits (57), Expect = 1.3,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 2/89 (2%)

Query: 30   KPQNNIEKHEEEPKEEIISDEERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDDESKS 88
            +P++   K  E    E    E +  E +  EPK  E    E K ++ +  EPK  +   +
Sbjct: 926  EPKSAEPKPAEPNSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPA 985

Query: 89   STKSYSQSKPDDMSDNDSKDNESSKSEEK 117
              KS ++ KP +    + K  E   +E K
Sbjct: 986  EPKS-AEPKPAEPKSAEPKPAEPKSAEPK 1013




 Score = 26.2 bits (56), Expect = 1.5,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 43/108 (39%), Gaps = 5/108 (4%)

Query: 30   KPQNNIEKHEEEPKEEIISDEERDTEKRKTEPKDESISDEEKDSDKRKVEPKDDDESKSS 89
            +P++   K  E    E    E +  E +  EPK    S E K ++ +  EPK   E KS+
Sbjct: 946  EPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPK----SAEPKPAEPKSAEPK-PAEPKSA 1000

Query: 90   TKSYSQSKPDDMSDNDSKDNESSKSEEKTKRRRRRKQNKDEDLSESLS 137
                ++ K  +    + K  E   +E        R+   D+  S + S
Sbjct: 1001 EPKPAEPKSAEPKPAEPKSAEPKPAEPNAATSSAREGTADQPASATFS 1048




 Score = 26.2 bits (56), Expect = 1.6,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 2/89 (2%)

Query: 30  KPQNNIEKHEEEPKEEIISDEERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDDESKS 88
           +P++   K  E    E    E +  E +  EPK  E    E K +  +  EPK  +   +
Sbjct: 846 EPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAESKSAGPKPAEPKSAEPKPA 905

Query: 89  STKSYSQSKPDDMSDNDSKDNESSKSEEK 117
             KS ++ KP +    + K  E   +E K
Sbjct: 906 EPKS-AEPKPAEPKSAEPKPAEPKSAEPK 933




 Score = 25.8 bits (55), Expect = 2.0,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 2/89 (2%)

Query: 30   KPQNNIEKHEEEPKEEIISDEERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDDESKS 88
            +P++   K  E    E    E    E +  EPK  E    E K ++ +  EPK  +   +
Sbjct: 916  EPKSAEPKPAEPKSAEPKPAEPNSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPA 975

Query: 89   STKSYSQSKPDDMSDNDSKDNESSKSEEK 117
              KS ++ KP +    + K  E   +E K
Sbjct: 976  EPKS-AEPKPAEPKSAEPKPAEPKSAEPK 1003




 Score = 25.0 bits (53), Expect = 3.4,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 33/88 (37%)

Query: 30  KPQNNIEKHEEEPKEEIISDEERDTEKRKTEPKDESISDEEKDSDKRKVEPKDDDESKSS 89
           +P++   K  E    E    E +  E +  EPK       E +S + K       E K +
Sbjct: 896 EPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPNSAEPKPAEPKSAEPKPA 955

Query: 90  TKSYSQSKPDDMSDNDSKDNESSKSEEK 117
               ++ KP +    + K  E   +E K
Sbjct: 956 EPKSAEPKPAEPKSAEPKPAEPKSAEPK 983




 Score = 25.0 bits (53), Expect = 3.4,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 2/89 (2%)

Query: 30  KPQNNIEKHEEEPKEEIISDEERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDDESKS 88
           +P++   K  E    E    E +  E +  EP   E    E K ++ +  EPK  +   +
Sbjct: 906 EPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPNSAEPKPAEPKSAEPKPAEPKSAEPKPA 965

Query: 89  STKSYSQSKPDDMSDNDSKDNESSKSEEK 117
             KS ++ KP +    + K  E   +E K
Sbjct: 966 EPKS-AEPKPAEPKSAEPKPAEPKSAEPK 993




 Score = 25.0 bits (53), Expect = 4.0,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 2/89 (2%)

Query: 30  KPQNNIEKHEEEPKEEIISDEERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDDESKS 88
           +P++   K  E    E    E +    +  EPK  E    E K ++ +  EPK  +   +
Sbjct: 866 EPKSAEPKPAEPKSAEPKPAESKSAGPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPA 925

Query: 89  STKSYSQSKPDDMSDNDSKDNESSKSEEK 117
             KS ++ KP + +  + K  E   +E K
Sbjct: 926 EPKS-AEPKPAEPNSAEPKPAEPKSAEPK 953



>EAY10182.1 on XP_001350410  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2178

 Score = 26.9 bits (58), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 13/32 (40%), Positives = 20/32 (62%)

Query: 33  NNIEKHEEEPKEEIISDEERDTEKRKTEPKDE 64
           N +E   EE K+E++ D E    K+ T+PK+E
Sbjct: 795 NPVEGSSEEEKQEVVKDTEAAVPKQDTQPKEE 826



>EAY10182.1 on XP_813237   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1496

 Score = 26.6 bits (57), Expect = 1.2,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 60/142 (42%), Gaps = 4/142 (2%)

Query: 30   KPQNNIEKHEEEPKEEIISDEERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDDESKS 88
            +P++   K  E    E  S E +  E +  EPK  E    E K ++ +  EPK   E K 
Sbjct: 1289 EPKSAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEPK-SAEPKP 1347

Query: 89   STKSYSQSKPDDMSDNDSKDNESSKSEEKTKRRRRRKQNKDEDLSESLSYSKST--KGSY 146
            +    ++ KP +    + K  E    E K    +  +    E  + + S  + T  + + 
Sbjct: 1348 AEPKPAEPKPAEPKSAEPKPAEPKSGEPKPAEPKPAEPKPAEPNAATSSAREGTADQPAS 1407

Query: 147  STSNKEKHSISSEYSYSVPNED 168
            +TS+ E  +++S  S SV   D
Sbjct: 1408 ATSSDEHEALASVTSSSVAITD 1429




 Score = 24.3 bits (51), Expect = 5.7,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 5/89 (5%)

Query: 30   KPQNNIEKHEEEPKEEIISDEERDTEKRKTEPKDESISDEEKDSDKRKVEPKDDDESKSS 89
            +P++   K  E    E  S E +  E +  EPK    S E K ++ +  EPK   E K +
Sbjct: 1259 EPKSAEPKPAEPKPAEPKSAEPKPAEPKPAEPK----SAEPKPAEPKPAEPK-SAEPKPA 1313

Query: 90   TKSYSQSKPDDMSDNDSKDNESSKSEEKT 118
                ++ KP +    + K  E   +E K+
Sbjct: 1314 EPKPAEPKPAEPKPAEPKSAEPKPAEPKS 1342




 Score = 24.3 bits (51), Expect = 6.4,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 2/89 (2%)

Query: 30   KPQNNIEKHEEEPKEEIISDEERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDDESKS 88
            +P+    K  E    E    E +  E +  EPK  E  S E K ++ +  EPK  +   +
Sbjct: 1269 EPKPAEPKSAEPKPAEPKPAEPKSAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPAEPKPA 1328

Query: 89   STKSYSQSKPDDMSDNDSKDNESSKSEEK 117
              KS ++ KP +    + K  E   +E K
Sbjct: 1329 EPKS-AEPKPAEPKSAEPKPAEPKPAEPK 1356




 Score = 24.3 bits (51), Expect = 7.0,   Method: Composition-based stats.
 Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 2/90 (2%)

Query: 30   KPQNNIEKHEEEPKEEIISDEERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDDESKS 88
            +P+    K  E    E  S E +  E +  EPK  E    E K ++ +  EPK  +   +
Sbjct: 1244 EPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKSAEPKPAEPKPAEPKSAEPKPAEPKPA 1303

Query: 89   STKSYSQSKPDDMSDNDSKDNESSKSEEKT 118
              KS ++ KP +    + K  E   +E K+
Sbjct: 1304 EPKS-AEPKPAEPKPAEPKPAEPKPAEPKS 1332




 Score = 23.9 bits (50), Expect = 8.1,   Method: Composition-based stats.
 Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 6/90 (6%)

Query: 35   IEKHEEEPK-EEIISDEERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDD----ESKS 88
            +E    EPK  E  S E +  E +  EPK  E  S E K ++ +  EPK  +    E K 
Sbjct: 1068 VEPKAAEPKPAEPKSAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPAEPKPVEPKP 1127

Query: 89   STKSYSQSKPDDMSDNDSKDNESSKSEEKT 118
            +    ++ KP +    + K  E   +E K+
Sbjct: 1128 AEPKPAEPKPAEPKPAEPKPAEPKPAEPKS 1157




 Score = 23.9 bits (50), Expect = 8.7,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 2/90 (2%)

Query: 30   KPQNNIEKHEEEPKEEIISDEERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDDESKS 88
            +P+    K  E    E  S E +  E +  EPK  E    E K ++ +  EPK   E KS
Sbjct: 1139 EPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPVEPKPAEPKPAEPKPAEPK-PAEPKS 1197

Query: 89   STKSYSQSKPDDMSDNDSKDNESSKSEEKT 118
            +    ++ KP +    + K  E   +E K+
Sbjct: 1198 AEPKPAEPKPAEPKPAEPKPAEPKPAEPKS 1227



>EAY10182.1 on XP_814246   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1002

 Score = 25.8 bits (55), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 20/94 (21%), Positives = 38/94 (40%), Gaps = 7/94 (7%)

Query: 39  EEEPKEEIISDEERDTEKRKTEPKDESISDEEKDSDKRKVEPKDDDESKSSTKSYSQSKP 98
           E+ P+   +SD   D EK    P   +       SD++ V+P++  ++   T   + S P
Sbjct: 840 EDWPQHSTLSDASEDVEKSSFHPAPLT-------SDEQTVDPEERKDTNPHTAVGASSGP 892

Query: 99  DDMSDNDSKDNESSKSEEKTKRRRRRKQNKDEDL 132
           D     +    + + +  +     +  Q  DE L
Sbjct: 893 DSSHSTEVAPMDGATAAHEPSTDPKTAQGHDEVL 926



>EAY10182.1 on XP_804106   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1006

 Score = 25.0 bits (53), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 7/61 (11%)

Query: 39  EEEPKEEIISDEERDTEKRKTEPKDESISDEEKDSDKRKVEPKDDDESKSSTKSYSQSKP 98
           E+ P+   +SD   D EK    P   +       SD++ V+P++  ++   T   + S P
Sbjct: 844 EDWPQHSTLSDASEDVEKSSFHPAPPT-------SDEQTVDPEERKDTNPHTAVGASSGP 896

Query: 99  D 99
           D
Sbjct: 897 D 897



>EAY10182.1 on XP_808957   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1446

 Score = 24.6 bits (52), Expect = 4.6,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 2/89 (2%)

Query: 30  KPQNNIEKHEEEPKEEIISDEERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDDESKS 88
           +P++   K  E    E    E +  E +  EPK  E    E K ++ +  EPK  +   +
Sbjct: 836 EPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPEPAEPKSAEPKPAEPKSAEPEPA 895

Query: 89  STKSYSQSKPDDMSDNDSKDNESSKSEEK 117
             KS ++ KP +    + K  E   +E K
Sbjct: 896 EPKS-AEPKPAEPKSAEPKPAEPKSAEPK 923




 Score = 24.6 bits (52), Expect = 4.7,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 2/89 (2%)

Query: 30   KPQNNIEKHEEEPKEEIISDEERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDDESKS 88
            +P++   K  E    E    E +  E +  EPK  E    E K ++ +  EPK  +   +
Sbjct: 926  EPKSAGPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPA 985

Query: 89   STKSYSQSKPDDMSDNDSKDNESSKSEEK 117
              KS ++ KP +    + K  E   +E K
Sbjct: 986  EPKS-AEPKPAEPKSAEPKPAEPKSAEPK 1013




 Score = 23.9 bits (50), Expect = 9.5,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 2/89 (2%)

Query: 30  KPQNNIEKHEEEPKEEIISDEERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDDESKS 88
           +P++   K  E    E    E +  E +  EPK  E    E K ++ +  EPK      +
Sbjct: 876 EPKSAEPKPAEPKSAEPEPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAGPKPA 935

Query: 89  STKSYSQSKPDDMSDNDSKDNESSKSEEK 117
             KS ++ KP +    + K  E   +E K
Sbjct: 936 EPKS-AEPKPAEPKSAEPKPAEPKSAEPK 963




 Score = 23.9 bits (50), Expect = 9.6,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 2/87 (2%)

Query: 30   KPQNNIEKHEEEPKEEIISDEERDTEKRKTEPKD-ESISDEEKDSDKRKVEPKDDDESKS 88
            +P++   K  E    E    E +  E +  EPK  E    E K ++ +  EPK  +   +
Sbjct: 936  EPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPA 995

Query: 89   STKSYSQSKPDDMSDNDSKDNESSKSE 115
              KS ++ KP +    + K  E   +E
Sbjct: 996  EPKS-AEPKPAEPKSAEPKPAEPKSAE 1021



>EAY10182.1 on XP_813188   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1002

 Score = 24.3 bits (51), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 20/94 (21%), Positives = 36/94 (38%), Gaps = 7/94 (7%)

Query: 39  EEEPKEEIISDEERDTEKRKTEPKDESISDEEKDSDKRKVEPKDDDESKSSTKSYSQSKP 98
           EE P+   +SD   D E       + S       SD++ V+P++  ++   T   + S P
Sbjct: 841 EERPQHSTLSDASEDVE-------ESSFHSAPLTSDEQTVDPEERKDTNPHTAVGASSGP 893

Query: 99  DDMSDNDSKDNESSKSEEKTKRRRRRKQNKDEDL 132
           D     +    + + +  +        Q  DE L
Sbjct: 894 DSFHSTEVTPVDGATAAHEPSTDPETAQGHDEVL 927



>EAY10182.1 on XP_001348176  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3119

 Score = 23.9 bits (50), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)

Query: 130 EDLSESLSYSKSTKGSYSTSNKEK-HSISSEYSYSVPNEDSQSNED 174
           ED+ ++L+ +   +  Y     +K HS SSEY     N D  +N D
Sbjct: 252 EDVWKALTCNAPYEAQYFIKPSDKEHSFSSEYCGHYKNGDPLTNLD 297



>EAY10182.1 on XP_817994   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 954

 Score = 23.9 bits (50), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 8/48 (16%)

Query: 47  ISDEE---RDTEKRKTEPKDESISDEEKDSDKRKVEPKDDDESKSSTK 91
           +SDEE    DT K KT+  +E +SDE     K        D+SK+ T+
Sbjct: 133 LSDEESKELDTNKLKTQLLEECLSDE-----KSACHIAGQDDSKTQTR 175



>EAY10182.1 on XP_807433   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1042

 Score = 23.9 bits (50), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 14/72 (19%)

Query: 40  EEPKEEIISDEERDTEKRKTEPKDESISDEEKD------------SDKRKVEPKDDDESK 87
           E+ +E +++  +R T + +  P+  ++SD  +D            SD++ VEP++  ++ 
Sbjct: 864 EQAEEAVVATPQRKTTEDR--PQHSTLSDASEDMEESSSHSATLTSDEQTVEPEERKDTN 921

Query: 88  SSTKSYSQSKPD 99
             T   + S PD
Sbjct: 922 PHTAVGASSGPD 933




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10185.1 hypothetical protein TVAG_118370 [Trichomonas
vaginalis G3]
         (159 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAL27793   CPSII  (Establishment)  [Toxoplasma gondii]                 25   2.1  
XP_001347690  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   4.4  
XP_001352170  MSP1  (Invasion)  [Plasmodium falciparum]                24   4.9  
XP_813641   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   7.5  
XP_820147   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   8.3  

>EAY10185.1 on AAL27793   CPSII  (Establishment)  [Toxoplasma gondii]
          Length = 255

 Score = 25.0 bits (53), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 1/47 (2%)

Query: 104 FLEKEIGIDGLIDLKELIYEENDTPFPEHPIPTKYDPQIIVLTRQLL 150
           FL    G  G +   E+++      +PE      Y+ QI+VLT  L+
Sbjct: 35  FLGYSFGYPGSVG-GEVVFNTGMVGYPESLTDPSYEGQILVLTYPLI 80



>EAY10185.1 on XP_001347690  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2215

 Score = 24.3 bits (51), Expect = 4.4,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 14/24 (58%)

Query: 123  EENDTPFPEHPIPTKYDPQIIVLT 146
            E+N+ P P HP+P+     I+  T
Sbjct: 1742 EKNNLPQPSHPLPSDNTSDILKTT 1765



>EAY10185.1 on XP_001352170  MSP1  (Invasion)  [Plasmodium falciparum]
          Length = 1720

 Score = 24.3 bits (51), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 15/54 (27%), Positives = 21/54 (38%), Gaps = 1/54 (1%)

Query: 7   LEEMNQINGLVQPDSPTRRPVVAQSALSHAKPVNPVKQARKNEVMQQALDINSG 60
           LEE  QI G     SP    V    + +H+   N    A      Q  + ++SG
Sbjct: 901 LEEQKQITGTSSTSSPGNTTVNTAQSATHSNSQNQQSNASSTNT-QNGVAVSSG 953



>EAY10185.1 on XP_813641   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 873

 Score = 23.5 bits (49), Expect = 7.5,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 23/46 (50%)

Query: 34  SHAKPVNPVKQARKNEVMQQALDINSGSFDDDSFSEPKGPSVIKRK 79
           +H   + PV      E+   +L  NSG+ +DD+    K  ++ +R+
Sbjct: 401 THIVDIGPVSGDDDEEITASSLLYNSGTGEDDTDDNEKLIALYERQ 446



>EAY10185.1 on XP_820147   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 878

 Score = 23.5 bits (49), Expect = 8.3,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 23/46 (50%)

Query: 34  SHAKPVNPVKQARKNEVMQQALDINSGSFDDDSFSEPKGPSVIKRK 79
           +H   + PV      E+   +L  NSG+ +DD+    K  ++ +R+
Sbjct: 396 THIVDIGPVSGDDDEEITASSLLYNSGTGEDDTDDNEKLIALYERQ 441




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10186.1 hypothetical protein TVAG_118380 [Trichomonas
vaginalis G3]
         (160 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAC80459  Oligopeptidase B  (Others)  [Trypanosoma brucei]             25   3.8  

>EAY10186.1 on AAC80459  Oligopeptidase B  (Others)  [Trypanosoma brucei]
          Length = 715

 Score = 24.6 bits (52), Expect = 3.8,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 22/50 (44%)

Query: 62  PYIVSYIESFHERGNLYIVMEYADGGDLSQKIEAQRGKHFSENEILHDFI 111
           P   S    + +RG +Y +     GG++ +      GK+ ++     DFI
Sbjct: 491 PEFNSRFLPYVDRGMIYAIAHVRGGGEMGRTWYEVGGKYLTKRNTFMDFI 540




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10187.1 surface antigen BspA-like [Trichomonas
vaginalis G3]
         (196 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_845133  VSG  (Establishment)  [Trypanosoma brucei]                  25   4.4  

>EAY10187.1 on XP_845133  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 500

 Score = 24.6 bits (52), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 21/50 (42%)

Query: 3  KHCQFIENYTFAYTPMKKLVFNDEMQSIYAYSLAFTNLTTLILPQSLRYI 52
          K  +  E  T    P ++  FND++  IY  SLA    T   L    R I
Sbjct: 30 KPAKGTEANTNIKNPCQEKKFNDKLIQIYEASLAGARRTLAELASDSRKI 79




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10189.1 surface antigen BspA-like [Trichomonas
vaginalis G3]
         (348 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_965997  PfEMP1  (Establishment)  [Plasmodium falciparum]            27   2.7  
XP_808156   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   4.0  
XP_815318   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   4.9  

>EAY10189.1 on XP_965997  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2879

 Score = 26.6 bits (57), Expect = 2.7,   Method: Composition-based stats.
 Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 4/60 (6%)

Query: 12  YSIRDGYVSNYQFRYDSTVQDLSITNVTTFGYQSFY---SCSNLRTVIVLDTLTSIGSYC 68
           ++++ G   N    Y+S   D+S +N+ T  Y+SFY   + S+ + V    TL + G YC
Sbjct: 364 FNMQKGKYENEIKTYESD-NDISNSNINTEYYKSFYKKFAKSDYKKVHDFLTLLNNGRYC 422



>EAY10189.1 on XP_808156   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1058

 Score = 25.8 bits (55), Expect = 4.0,   Method: Composition-based stats.
 Identities = 9/17 (52%), Positives = 12/17 (70%)

Query: 203 NSYIFKSANVSHVYIGG 219
           N ++F S  +SH YIGG
Sbjct: 671 NDHLFNSHRISHFYIGG 687



>EAY10189.1 on XP_815318   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 587

 Score = 25.8 bits (55), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 9/17 (52%), Positives = 12/17 (70%)

Query: 203 NSYIFKSANVSHVYIGG 219
           N ++F S  +SH YIGG
Sbjct: 200 NDHLFNSHRISHFYIGG 216




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10192.1 surface antigen BspA-like [Trichomonas
vaginalis G3]
         (328 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10193.1 hypothetical protein TVAG_118450 [Trichomonas
vaginalis G3]
         (301 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609315  variant erythrocyte surface antigen-1, alpha subun...    26   4.0  
AAY44839  MSA-1  (Invasion)  [Babesia bovis]                           25   4.5  

>EAY10193.1 on XP_001609315  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1338

 Score = 25.8 bits (55), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 32  PDGNPQYIVVFIHDIGSFVTHNHDVFDVITANRGAVYACDH 72
           P  N   ++ FI ++  F+    D+FD++ + R  V+  DH
Sbjct: 825 PTNNKIELISFIKELKEFLNIIDDMFDIVGSTR-CVHCRDH 864



>EAY10193.1 on AAY44839  MSA-1  (Invasion)  [Babesia bovis]
          Length = 274

 Score = 25.4 bits (54), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 12/36 (33%), Positives = 16/36 (44%)

Query: 187 PNYVEISEKCPLYLPYITPHLYLSAMKAITNVRNKI 222
           P   +  E  P YLP  TP L    +K   N+  K+
Sbjct: 22  PENSQTIETPPAYLPVATPGLLFDDIKTFHNLMEKL 57




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10207.1 hypothetical protein TVAG_118590 [Trichomonas
vaginalis G3]
         (322 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_820135   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.2  
AAW71454  Histo-aspartic protease  (Proteases)  [Plasmodium falc...    25   4.8  
AAW71455  Histo-aspartic protease  (Proteases)  [Plasmodium falc...    25   4.8  
AAW71456  Histo-aspartic protease  (Proteases)  [Plasmodium falc...    25   4.8  
AAW71457  Histo-aspartic protease  (Proteases)  [Plasmodium falc...    25   4.8  
AAW71458  Histo-aspartic protease  (Proteases)  [Plasmodium falc...    25   4.8  

>EAY10207.1 on XP_820135   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1519

 Score = 26.6 bits (57), Expect = 2.2,   Method: Composition-based stats.
 Identities = 12/22 (54%), Positives = 16/22 (72%)

Query: 198  KTAEIEPSIQKIIIPKTGKPKP 219
            K+AE +P+ QK   PKT +PKP
Sbjct: 1349 KSAEPKPAEQKSAEPKTAEPKP 1370



>EAY10207.1 on AAW71454  Histo-aspartic protease  (Proteases)  [Plasmodium
           falciparum]
          Length = 451

 Score = 25.4 bits (54), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 5/87 (5%)

Query: 41  IVLASEYSLYFFTSKTFSKQLQVRLSFTWDKIKSI--NLPDSSTIILTYI-EKELKILHK 97
           IVLA  +S Y F +  F K  ++       K  ++  N+ +S   ++  I E +LK   K
Sbjct: 47  IVLAGGFSYYIFENFVFQKNRKINHIIKTSKYSTVGFNIENSYDRLMKTIKEHKLKNYIK 106

Query: 98  DAVQMFYSILLHLKSIFIPSEMPQVEI 124
           ++V++F   L   K  ++ SE   VE+
Sbjct: 107 ESVKLFNKGL--TKKSYLGSEFDNVEL 131



>EAY10207.1 on AAW71455  Histo-aspartic protease  (Proteases)  [Plasmodium
           falciparum]
          Length = 451

 Score = 25.4 bits (54), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 5/87 (5%)

Query: 41  IVLASEYSLYFFTSKTFSKQLQVRLSFTWDKIKSI--NLPDSSTIILTYI-EKELKILHK 97
           IVLA  +S Y F +  F K  ++       K  ++  N+ +S   ++  I E +LK   K
Sbjct: 47  IVLAGGFSYYIFENFVFQKNRKINHIIKTSKYSTVGFNIENSYDRLMKTIKEHKLKNYIK 106

Query: 98  DAVQMFYSILLHLKSIFIPSEMPQVEI 124
           ++V++F   L   K  ++ SE   VE+
Sbjct: 107 ESVKLFNKGL--TKKSYLGSEFDNVEL 131



>EAY10207.1 on AAW71456  Histo-aspartic protease  (Proteases)  [Plasmodium
           falciparum]
          Length = 451

 Score = 25.4 bits (54), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 5/87 (5%)

Query: 41  IVLASEYSLYFFTSKTFSKQLQVRLSFTWDKIKSI--NLPDSSTIILTYI-EKELKILHK 97
           IVLA  +S Y F +  F K  ++       K  ++  N+ +S   ++  I E +LK   K
Sbjct: 47  IVLAGGFSYYIFENFVFQKNRKINHIIKTSKYSTVGFNIENSYDRLMKTIKEHKLKNYIK 106

Query: 98  DAVQMFYSILLHLKSIFIPSEMPQVEI 124
           ++V++F   L   K  ++ SE   VE+
Sbjct: 107 ESVKLFNKGL--TKKSYLGSEFDNVEL 131



>EAY10207.1 on AAW71457  Histo-aspartic protease  (Proteases)  [Plasmodium
           falciparum]
          Length = 451

 Score = 25.4 bits (54), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 5/87 (5%)

Query: 41  IVLASEYSLYFFTSKTFSKQLQVRLSFTWDKIKSI--NLPDSSTIILTYI-EKELKILHK 97
           IVLA  +S Y F +  F K  ++       K  ++  N+ +S   ++  I E +LK   K
Sbjct: 47  IVLAGGFSYYIFENFVFQKNRKINHIIKTSKYSTVGFNIENSYDRLMKTIKEHKLKNYIK 106

Query: 98  DAVQMFYSILLHLKSIFIPSEMPQVEI 124
           ++V++F   L   K  ++ SE   VE+
Sbjct: 107 ESVKLFNKGL--TKKSYLGSEFDNVEL 131



>EAY10207.1 on AAW71458  Histo-aspartic protease  (Proteases)  [Plasmodium
           falciparum]
          Length = 451

 Score = 25.4 bits (54), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 5/87 (5%)

Query: 41  IVLASEYSLYFFTSKTFSKQLQVRLSFTWDKIKSI--NLPDSSTIILTYI-EKELKILHK 97
           IVLA  +S Y F +  F K  ++       K  ++  N+ +S   ++  I E +LK   K
Sbjct: 47  IVLAGGFSYYIFENFVFQKNRKINHIIKTSKYSTVGFNIENSYDRLMKTIKEHKLKNYIK 106

Query: 98  DAVQMFYSILLHLKSIFIPSEMPQVEI 124
           ++V++F   L   K  ++ SE   VE+
Sbjct: 107 ESVKLFNKGL--TKKSYLGSEFDNVEL 131




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10208.1 hypothetical protein TVAG_118600 [Trichomonas
vaginalis G3]
         (317 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10224.1 hypothetical protein TVAG_118760 [Trichomonas
vaginalis G3]
         (1367 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_803344   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   1.3  
AAK49521  BAEBL/EBP2  (Adhesin)  [Plasmodium falciparum]               28   3.7  

>EAY10224.1 on XP_803344   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 249

 Score = 29.3 bits (64), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 1/55 (1%)

Query: 402 HKNNEYQDVPNNNSEEQISVKSRDLNNSPQSVKSGKGYFDSI-SEDLCTPIVHVP 455
           H+       P  +  E     S D NNSP +  +G G F++  SED  T  V  P
Sbjct: 82  HQAGNNTSTPTGSEREAAPAASGDNNNSPTAAVAGAGEFETTHSEDFFTTEVESP 136



>EAY10224.1 on AAK49521  BAEBL/EBP2  (Adhesin)  [Plasmodium falciparum]
          Length = 1210

 Score = 28.5 bits (62), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 28/118 (23%), Positives = 52/118 (44%), Gaps = 20/118 (16%)

Query: 139 KVKKIPRKQSTASKYLYKKYLNKWRNKLLDKKKQKFMKWKSLMDLCQKSPI--NIPKNTH 196
           K +KIP+         + ++  +W +   +K+K+K   ++S    C+K     N  KN  
Sbjct: 612 KFQKIPQ---------FLRWFKEWGDDFCEKRKEKIYSFESFKVECKKKDCDENTCKNKC 662

Query: 197 SNLSKWTAFTTKLKLQRIRSKSKKYINYKRFIDLKEKLVKFVNEKEKEESRIYLLQRS 254
           S   KW      LK      +  KY       D  +K+   ++E + +E+ +YL ++S
Sbjct: 663 SEYKKW----IDLKKSEYEKQVDKYTK-----DKNKKMYDNIDEVKNKEANVYLKEKS 711




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10227.1 Dedicator of cytokinesis family protein
[Trichomonas vaginalis G3]
         (1611 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_966160  PfEMP1  (Establishment)  [Plasmodium falciparum]            28   7.9  

>EAY10227.1 on XP_966160  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2394

 Score = 27.7 bits (60), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 10/90 (11%)

Query: 1490 EEIEYSPIQVTCNSLSARVAMLKNAIQAADY-------QTVQQLLHGNLMVQVNEGPSKM 1542
            E+  Y      C ++    A L + I+  D        Q  Q  L        N+ P  +
Sbjct: 900  EQSNYKDFSTICRAMKYSFADLGDIIKGTDLWDKNGGEQKTQGKLEKIFCKIKNKLPEDI 959

Query: 1543 AEVFLNDGQKGQYYDKLREIFRDFLKTNQE 1572
             E ++ND +    Y KLRE   D+ + N++
Sbjct: 960  QEKYINDDKNSPQYKKLRE---DWWEANRK 986




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10229.1 GTPase-activator protein, putative
[Trichomonas vaginalis G3]
         (601 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10232.1 hypothetical protein TVAG_118840 [Trichomonas
vaginalis G3]
         (217 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_829797  VSG  (Establishment)  [Trypanosoma brucei]                  27   0.63 
XP_001351515  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   1.4  
XP_001609565  variant erythrocyte surface antigen-1, alpha subun...    27   1.4  
XP_001350796  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   1.8  
XP_812339   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   2.7  
XP_829791  VSG  (Establishment)  [Trypanosoma brucei]                  24   7.4  

>EAY10232.1 on XP_829797  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 509

 Score = 27.3 bits (59), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 6/55 (10%)

Query: 81  FLAKLISDDYHVTEVRSVATISRILFYKEYGIKLDKSID------YDQFNSENRD 129
           FL + I++  +V +  + AT+   L    YG+K +   D      YD  N++ R+
Sbjct: 152 FLTQQIAEKENVGKKHTAATVKAALNEAIYGVKQEAPPDFEPTRNYDGLNTQARE 206



>EAY10232.1 on XP_001351515  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2181

 Score = 26.6 bits (57), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 182 CYHGAVDCFKLLRTKFKSEITDVCLVFSFLGG 213
           C    +DC K +R K+   I   C   SFL G
Sbjct: 341 CSGNGLDCTKTIRAKYIYAIGSECTKCSFLCG 372



>EAY10232.1 on XP_001609565  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1341

 Score = 26.6 bits (57), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 10/57 (17%)

Query: 19  KYYIDSYLALYQLKTENEEELKSIYKMIKTELIDSKIYLAKIAIKDILDIIPYNNRY 75
           +Y+ DSY++ Y   T     L +    ++++ +D K Y      KD++DI P +N Y
Sbjct: 254 EYHKDSYMSAYPSGT-----LYTRDSFVESKQVDVKPYW-----KDLIDIPPGDNSY 300



>EAY10232.1 on XP_001350796  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2646

 Score = 26.2 bits (56), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 12/32 (37%), Positives = 14/32 (43%)

Query: 182 CYHGAVDCFKLLRTKFKSEITDVCLVFSFLGG 213
           C     DC K +R K+   I D C   SF  G
Sbjct: 342 CSGDGFDCTKTIRAKYIYAIGDECTKCSFWCG 373



>EAY10232.1 on XP_812339   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 949

 Score = 25.8 bits (55), Expect = 2.7,   Method: Composition-based stats.
 Identities = 11/23 (47%), Positives = 16/23 (69%)

Query: 127 NRDIHTENTVYRAIMYNDKEKFI 149
           N D +TEN+V   + YN K+K+I
Sbjct: 605 NGDENTENSVLLGLSYNKKKKWI 627



>EAY10232.1 on XP_829791  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 506

 Score = 24.3 bits (51), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 12/48 (25%), Positives = 21/48 (43%)

Query: 100 TISRILFYKEYGIKLDKSIDYDQFNSENRDIHTENTVYRAIMYNDKEK 147
           T  ++  Y E    L ++       +  R++    T  RA +Y DK+K
Sbjct: 145 TAKQLAVYAEEAAALARTYTEGITAANGRELKAIKTALRAALYGDKQK 192




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10242.1 SH3 domain containing protein [Trichomonas
vaginalis G3]
         (434 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_966305  PfEMP1  (Establishment)  [Plasmodium falciparum]            27   2.4  

>EAY10242.1 on XP_966305  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3954

 Score = 27.3 bits (59), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 15/66 (22%), Positives = 35/66 (53%), Gaps = 9/66 (13%)

Query: 75   SFNQLSSYQRLSEIFSEVATQISLMLKEIKEYLMPKLNFCIEYATKTTEEIFTSSKELEK 134
            S N++  ++RLS  F+EV   ++  +K++  Y         EY  +   +   S K++E+
Sbjct: 3014 SNNRIPDWERLSSKFNEVKGTMNENVKKLTAY---------EYLKQNCSKCICSFKDIEQ 3064

Query: 135  LYQETR 140
             +++++
Sbjct: 3065 THKKSK 3070




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10243.1 Phosphatidylinositol 3- and 4-kinase family
protein [Trichomonas vaginalis G3]
         (734 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAD32093  cpABC  (Establishment)  [Cryptosporidium parvum]             30   0.56 
XP_843649  VSG  (Establishment)  [Trypanosoma brucei]                  27   4.9  

>EAY10243.1 on AAD32093  cpABC  (Establishment)  [Cryptosporidium parvum]
          Length = 255

 Score = 29.6 bits (65), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 12/22 (54%), Positives = 15/22 (68%)

Query: 269 ADFEALKEYPKYVSTFPSGFLK 290
            +FE+L +YPKY S F  GFL 
Sbjct: 30  VNFESLGKYPKYHSFFKRGFLN 51



>EAY10243.1 on XP_843649  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 509

 Score = 26.9 bits (58), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 16/59 (27%), Positives = 26/59 (44%)

Query: 386 GSMAQRILADLLKVVNKEIIADIEVGRKELDRLMEIVKGVKTVPKDSQINFLKEKLGDG 444
           G+  ++ L  L K  +  I     + ++   +L +  K V TVPK +     KEK  D 
Sbjct: 378 GNEQEKKLGALSKGADLSIALSFIINKRHESQLQKAAKAVSTVPKQNCTGKTKEKCKDA 436




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10244.1 hypothetical protein TVAG_046660 [Trichomonas
vaginalis G3]
         (619 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001349514  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   2.4  
XP_966307  PfEMP1  (Establishment)  [Plasmodium falciparum]            28   2.6  

>EAY10244.1 on XP_001349514  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2120

 Score = 27.7 bits (60), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 24/101 (23%), Positives = 46/101 (45%), Gaps = 6/101 (5%)

Query: 149  TNVNNDVQEMRELLKQTGISTLNIMMERLDQDDDKFDAFNNSINNIQDRIEQLGQHFGEN 208
             N NND +++ +L K     + +      +  DD  D     IN +QD+I++  +   + 
Sbjct: 1484 ANANNDGKKLIKLSKFDNFCSCSASAHSPNGKDDAIDCM---INRLQDKIDKCKEKHPQ- 1539

Query: 209  LDTFKQQTSQDITRISRQLDDIQTQFMTNDKLNAPVSLDDV 249
              + + QT+ D + +   +DD + Q   N K+  P    +V
Sbjct: 1540 -PSAENQTTCDESTLVEDVDDYEEQNPEN-KVGKPAICGNV 1578



>EAY10244.1 on XP_966307  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2238

 Score = 27.7 bits (60), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 2/65 (3%)

Query: 225 RQLDDIQTQFMTNDKLNAPV-SLDDVSEADITPLILAVHRDTRRLDGVDQQISSVRLECE 283
           +Q D  Q Q +  D++ +P   L+ V E +  PLI   + D + ++G+++ +   + E E
Sbjct: 661 QQKDICQQQGILGDRIKSPYFVLELVLELEYFPLIKEAYGDAQAIEGINKTLDKKKQE-E 719

Query: 284 NISGA 288
            + GA
Sbjct: 720 GVLGA 724




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10247.1 hypothetical protein TVAG_046690 [Trichomonas
vaginalis G3]
         (402 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_806503   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.57 
XP_001352170  MSP1  (Invasion)  [Plasmodium falciparum]                28   1.00 

>EAY10247.1 on XP_806503   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 234

 Score = 28.5 bits (62), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 101 PYIIVKGKEVPTIFEFFLWSGISENYVIIYNYVDKRIVIDEFT 143
           P  I KG +V  + E FLWS +S    I ++ +D ++V+   T
Sbjct: 191 PTTIAKGNKVFLLSESFLWSNLSGE--IHWDRLDLKLVVGTVT 231



>EAY10247.1 on XP_001352170  MSP1  (Invasion)  [Plasmodium falciparum]
          Length = 1720

 Score = 28.1 bits (61), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 8/98 (8%)

Query: 24  DIFSLEHQVIHENLHSTFDEYYSSHEGCNTVEIQPNQKVRIALEPYSRQADIFLLLSKDQ 83
           +I S E++++ +N          S E  + V++Q  + + I      R+ ++FL   K+ 
Sbjct: 605 EIKSSENKILEKNFKGLTHSANGSLEVSDIVKLQVQKVLLIKKIEDLRKIELFL---KNA 661

Query: 84  FYDDSDILIPN----KKAPAPPYIIVKGKEVPTIFEFF 117
              DS I +PN    +  P P Y+IV  KEV  + EF 
Sbjct: 662 QLKDS-IHVPNIYKPQNKPEPYYLIVLKKEVDKLKEFI 698




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10251.1 hypothetical protein TVAG_046730 [Trichomonas
vaginalis G3]
         (482 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001610908  RAP-1  (Adhesin)  [Babesia bovis]                        27   4.1  
XP_001349438  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   6.7  

>EAY10251.1 on XP_001610908  RAP-1  (Adhesin)  [Babesia bovis]
          Length = 565

 Score = 26.6 bits (57), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 7/67 (10%)

Query: 296 PVSQLKRDKVPVTKNKIESNVPSTSRVPSKQVPQKTEK-------RPPQTARNERPKPII 348
           P  +  R+   VTK+ ++ N+   ++   + VPQ T+K       +P +    E P   +
Sbjct: 409 PTKEFFREAPQVTKHFLDENIAQPTKEFFRDVPQVTKKVITENIAQPTKEFLKEVPHTTM 468

Query: 349 SVLDESI 355
            VL+E+I
Sbjct: 469 KVLNENI 475



>EAY10251.1 on XP_001349438  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2265

 Score = 25.8 bits (55), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 10/94 (10%)

Query: 376  LDDPRK------TGIDWLDDMAENEEKLMLNFDAERAQEDSMLNL-YEAGASKAAQNINP 428
            +DDP+       +GID ++D     + + +  +  + +E+ +    Y+   S  +   N 
Sbjct: 1998 MDDPKYVSNNVYSGIDLINDTLSGNKHIDIYDEVLKRKENELFGTNYKKNTSNNSVTKNI 2057

Query: 429  NDDPFDNIMKMMNAGFDA---IHQQSMRDKELLD 459
            N DP DN + + +   D    + +Q    +ELLD
Sbjct: 2058 NSDPIDNQLNLFHTWLDRHRDMCEQWNNKEELLD 2091




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10252.1 TBC1 domain protein, putative [Trichomonas
vaginalis G3]
         (355 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001608669  variant erythrocyte surface antigen-1, beta subuni...    29   0.43 
XP_001608667  variant erythrocyte surface antigen-1, beta subuni...    27   1.7  

>EAY10252.1 on XP_001608669  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 607

 Score = 28.9 bits (63), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 52/134 (38%), Gaps = 15/134 (11%)

Query: 45  IAWLVLLGVYPSDPLTWKEVRDDLFKTYRDFCDLFGVADWHTKHF--KANVQKKALEVKD 102
           + W +L G    + + WKE      KT     + +     + K    K N  +   E   
Sbjct: 304 VVWKILAGKDKKNSIPWKEFASLGDKTGDSVAEYYSSIYENAKEALKKDNKTESICEQYP 363

Query: 103 CSKMHVIHNDIVRTG----RHIFFLPPGEVVEPYETACLA-PFAEHMRRLERILYIFSEC 157
              +H++ +   R G    + I  LP     +P  +A  A P +   R +  ILY  S  
Sbjct: 364 LLVLHILASGYFRAGSAGAKGITTLP----AKPATSATSATPVSRKPRTIREILYWLS-- 417

Query: 158 NRTLSYMQGFNELL 171
              L Y QG+ EL+
Sbjct: 418 --ALPYSQGYRELV 429



>EAY10252.1 on XP_001608667  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 1139

 Score = 27.3 bits (59), Expect = 1.7,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 52/134 (38%), Gaps = 15/134 (11%)

Query: 45  IAWLVLLGVYPSDPLTWKEVRDDLFKTYRDFCDLFGVADWHTKHF--KANVQKKALEVKD 102
           + W +L G    + + WKE      KT     + +     + K    K N  +   E   
Sbjct: 299 VVWKILAGKDKKNSIPWKEFASLGDKTGDSVAEYYSSIYENAKEALKKDNKTESICEQYP 358

Query: 103 CSKMHVIHNDIVRTG----RHIFFLPPGEVVEPYETACLA-PFAEHMRRLERILYIFSEC 157
              +H++ +   R G    + I  LP     +P  +A  A P +   R +  ILY  S  
Sbjct: 359 LLVLHILASGYFRAGSAGAKGITTLP----AKPATSATSATPVSRKPRTIREILYWLS-- 412

Query: 158 NRTLSYMQGFNELL 171
              L Y QG+ EL+
Sbjct: 413 --ALPYSQGYRELV 424




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10253.1 hypothetical protein TVAG_046750 [Trichomonas
vaginalis G3]
         (506 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_812988   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   0.60 
XP_807743   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   0.63 
XP_810237   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   2.0  
AAR87666  MIC3  (Invasion)  [Eimeria tenella]                          26   3.9  
XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]                 26   5.5  

>EAY10253.1 on XP_812988   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 889

 Score = 29.3 bits (64), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 2/22 (9%)

Query: 88  SHCVLYFTRDNDITHFLNYIGG 109
           + C L +T+D  I+HF  YIGG
Sbjct: 658 AQCALKYTKDKKISHF--YIGG 677



>EAY10253.1 on XP_807743   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 931

 Score = 29.3 bits (64), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 2/28 (7%)

Query: 85  GSRSHCVLYFTRDNDITHFLNYIGGKVR 112
           G  + C L  T  N+I+HF  YIGG  R
Sbjct: 665 GGDAQCELKVTESNEISHF--YIGGDER 690



>EAY10253.1 on XP_810237   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 922

 Score = 27.7 bits (60), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 2/25 (8%)

Query: 85  GSRSHCVLYFTRDNDITHFLNYIGG 109
           G  + C L  T  N+I+HF  YIGG
Sbjct: 662 GEDAQCELETTESNEISHF--YIGG 684



>EAY10253.1 on AAR87666  MIC3  (Invasion)  [Eimeria tenella]
          Length = 255

 Score = 26.2 bits (56), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 35/97 (36%), Gaps = 27/97 (27%)

Query: 44  DGMKGKQQTKR-----------IAQIPDCVFQLSDFTMIEMDADDRLVVTLSGSRSHCVL 92
           DG+KG   +K+            A  P CV      TM            L    S  V 
Sbjct: 80  DGIKGSPSSKQWRCYTEGALDLEAAGPGCVNSCGAATMC-----------LGAFNSRSVA 128

Query: 93  YFTRDNDITHFLNYIGGKVRLKNSDCNPRVYLLEPLD 129
           Y TR+N++T  L     K+R +     P   L E LD
Sbjct: 129 YLTRNNELTSIL-----KLRTQEFCSAPAPTLQEALD 160



>EAY10253.1 on XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]
          Length = 2112

 Score = 26.2 bits (56), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 11/73 (15%)

Query: 302 LTLSYWNLDNAAYVKDLVHFLAPFLDSYICDADKDKVILHDGSQLTAEESEADIFWCFTT 361
           +TL  W        KD+V F    L++   D DK    +H G    A+  + DI +   T
Sbjct: 316 ITLDKWK-------KDVVPFAEKVLNNLNIDKDK----IHVGIMRFAKSMKTDIGYEQET 364

Query: 362 FYDHNNLCDLVRQ 374
            Y  N+L  LVR+
Sbjct: 365 RYMKNDLIKLVRE 377




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10263.1 hypothetical protein TVAG_046850 [Trichomonas
vaginalis G3]
         (563 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10267.1 GAF domain containing protein [Trichomonas
vaginalis G3]
         (1209 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_813578   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           33   0.12 
XP_817165   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   7.8  
AAW78176  TRAP  (Invasion)  [Plasmodium falciparum]                    27   8.2  
AAW78153  TRAP  (Invasion)  [Plasmodium falciparum]                    27   8.3  
AAW78163  TRAP  (Invasion)  [Plasmodium falciparum]                    27   8.5  

>EAY10267.1 on XP_813578   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 893

 Score = 33.1 bits (74), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 15/51 (29%), Positives = 25/51 (49%)

Query: 923 FDVYSYPRNELYRFLIHIFTEMGLLSTFTIPIGVALRFFSSIADNYQQLPF 973
           + V S   N+LY F  H FT +  +S   +P GV +    +  ++ Q+  F
Sbjct: 558 WPVGSQGENQLYHFANHNFTLVATVSIHGVPEGVTIPLMGATMNDEQKKSF 608



>EAY10267.1 on XP_817165   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 750

 Score = 26.9 bits (58), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 5/56 (8%)

Query: 554 HKYYTALLAVAQELSAVLDTDTLVRKIMTKAQSFIGAD-RCSLFLVDKERGGLWSM 608
           HK        A     V++  TLV  +M K+    G D  CS+ +  K+ G  WS+
Sbjct: 257 HKGNLTRFLAAGGAGVVMEDGTLVFPVMAKS----GNDGYCSMIIYSKDNGSTWSL 308



>EAY10267.1 on AAW78176  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 545

 Score = 26.9 bits (58), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 11/37 (29%), Positives = 21/37 (56%)

Query: 131 GNAAIPQTEDQKMAKNSKKNRPGSAHFKTSETPYFLE 167
           GN  +P +ED++   + + N   S + K ++TP + E
Sbjct: 445 GNRHVPNSEDRETRPHGRNNENRSYNIKYNDTPKYPE 481



>EAY10267.1 on AAW78153  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 545

 Score = 26.9 bits (58), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 11/37 (29%), Positives = 21/37 (56%)

Query: 131 GNAAIPQTEDQKMAKNSKKNRPGSAHFKTSETPYFLE 167
           GN  +P +ED++   + + N   S + K ++TP + E
Sbjct: 445 GNRHVPNSEDRETRPHGRNNENRSYNIKYNDTPKYPE 481



>EAY10267.1 on AAW78163  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 565

 Score = 26.9 bits (58), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 11/37 (29%), Positives = 21/37 (56%)

Query: 131 GNAAIPQTEDQKMAKNSKKNRPGSAHFKTSETPYFLE 167
           GN  +P +ED++   + + N   S + K ++TP + E
Sbjct: 465 GNRHVPNSEDRETRPHGRNNENRSYNIKYNDTPKYPE 501




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10269.1 TKL family protein kinase [Trichomonas
vaginalis G3]
         (800 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    52   6e-08
AAB60238  Tams1  (Invasion)  [Theileria annulata]                      27   4.7  
XP_821397   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   7.5  
XP_827707  VSG  (Establishment)  [Trypanosoma brucei]                  26   9.4  

>EAY10269.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 52.0 bits (123), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 101/212 (47%), Gaps = 17/212 (8%)

Query: 199 QWRINLEDFEMIKEIGSGISSNVFYG-----RCKSTGLPVAIKKLKFKKLTGIKLQTFQR 253
           +W +  + +E++++IG G  S VF G     + K     +   K K  K     LQ  + 
Sbjct: 48  KWNVP-DSYEIVRKIGRGKFSEVFEGLNTVTKDKCVIKILKPVKKKKIKREIKILQNLRG 106

Query: 254 EISILAATSHPCLLKFVGATDTQPYCIITEWMDRDTLYRELHKTKMLNATKKTIVAFDIA 313
             +I+       LL  V    ++   +I E ++ +T ++ L+ T  +   K  I  + + 
Sbjct: 107 GPNIIK------LLDIVKDPQSRTPSLIFEHVN-NTDFKTLYPTLTIQDIKYYI--YQLL 157

Query: 314 RGMQYLHSKHIIHRDLKSLNVLLNEEGQ-AKIGDFGYSRSYDSEDSLLTQNIGTPHWMAP 372
           + M Y HS+ I+HRD+K  NV+++ E +  ++ D+G +  Y  E     + + T ++  P
Sbjct: 158 KAMNYCHSQGIMHRDIKPHNVMIDHEKKILRLIDWGLAEFYHPEQEYSVR-VATRYYKGP 216

Query: 373 ELLDGTTNYTNKVDVYAYAIVLWEIITGLQPY 404
           ELL     Y   +D+++   +L  II   +P+
Sbjct: 217 ELLVDMRYYDYSLDIWSIGCMLAGIIFKKEPF 248



>EAY10269.1 on AAB60238  Tams1  (Invasion)  [Theileria annulata]
          Length = 281

 Score = 26.9 bits (58), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 5/55 (9%)

Query: 459 YKNQIIFNGGDKEEFMNYVKQQIGDEIEKENEFESK----LLMAQKD-EQALNSM 508
           Y   ++F G D ++F+       GD   KE  FE K    + M Q D  +ALN+M
Sbjct: 192 YLEVVVFVGSDSKKFVKLYYFYTGDSRLKETYFELKDDKWVQMTQADANKALNAM 246



>EAY10269.1 on XP_821397   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 932

 Score = 26.6 bits (57), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 7/80 (8%)

Query: 689 AIPILSKANDIQISTEIIDALIELSKSDKNAGENLISICSNRQTSSI--VLNKYLSRDLG 746
           A  +L K++    + E+I AL E  K D  +  +L S+    Q   +  VL  +   D  
Sbjct: 416 ASSLLYKSDGSGNNEELI-ALYEKKKGDGESSHSLWSVLLTEQLQRVKDVLATWKKVD-- 472

Query: 747 DVNLITKICLSSAIHKDLFP 766
             +L++K+C +S+  KD  P
Sbjct: 473 --DLVSKLCTTSSAEKDASP 490



>EAY10269.1 on XP_827707  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 474

 Score = 26.2 bits (56), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 4/57 (7%)

Query: 131 QWMQLHILDLKSIATSFSIYLKDAKSSDSVTKLIEDRLQSINNFVKEYESESQDKRS 187
            WMQ     L+ +     + L+D+K   +  K I++  Q I N ++      + KRS
Sbjct: 331 HWMQA----LERVENDVEVLLQDSKYKSTKLKRIKELSQEIQNLIEGGTPRGRQKRS 383




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10280.1 hypothetical protein TVAG_047020 [Trichomonas
vaginalis G3]
         (410 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001349032  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   5.3  

>EAY10280.1 on XP_001349032  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2267

 Score = 25.8 bits (55), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 9/31 (29%), Positives = 19/31 (61%)

Query: 289 PCPVINKMFSSEIENVSQESFVEKWKYLSDK 319
           PC ++  +F+S+  N   E+  +K++Y  +K
Sbjct: 865 PCKIVETLFTSDDNNALNEACKQKYQYGKEK 895




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10281.1 CAMK family protein kinase [Trichomonas
vaginalis G3]
         (271 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    64   7e-13
XP_626924  Hsp90  (Heat shock protein)  [Cryptosporidium parvum]       32   0.024
AAB97088  Hsp90  (Heat shock protein)  [Eimeria tenella]               25   3.3  

>EAY10281.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 64.3 bits (155), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 103/209 (49%), Gaps = 17/209 (8%)

Query: 8   WSI-DDFDVGDVIGEGRFGKVFVAREKKSRFVCVLKIIRKKLLTKHNLEKQLISEIGLHS 66
           W++ D +++   IG G+F +VF      ++  CV+KI++     K   E +++  +    
Sbjct: 49  WNVPDSYEIVRKIGRGKFSEVFEGLNTVTKDKCVIKILKPVKKKKIKREIKILQNLR--- 105

Query: 67  SFNHPNILRLYGYFFDDERIM--MILEYAAHGTLSDLLKKHTKFDEPTAAKYFKQILSAV 124
               PNI++L     D +     +I E+  +     L    T  D      Y  Q+L A+
Sbjct: 106 --GGPNIIKLLDIVKDPQSRTPSLIFEHVNNTDFKTLYPTLTIQD---IKYYIYQLLKAM 160

Query: 125 EHIHSKEVLHRDLKPSNIMISLDNTLL-LGDFGFAIKGNAPAGEI---VGTLDYISPEIL 180
            + HS+ ++HRD+KP N+MI  +  +L L D+G A +   P  E    V T  Y  PE+L
Sbjct: 161 NYCHSQGIMHRDIKPHNVMIDHEKKILRLIDWGLA-EFYHPEQEYSVRVATRYYKGPELL 219

Query: 181 -NNKEYGRSADVWALGSILFELLTGKCPF 208
            + + Y  S D+W++G +L  ++  K PF
Sbjct: 220 VDMRYYDYSLDIWSIGCMLAGIIFKKEPF 248



>EAY10281.1 on XP_626924  Hsp90  (Heat shock protein)  [Cryptosporidium parvum]
          Length = 255

 Score = 32.0 bits (71), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 22/102 (21%)

Query: 16  GDVIGEGRFGKVFVAREKKSRFVCVLKIIRKKLLTKHNLEKQLISEIGLHSSFNHPNIL- 74
           GDV   G+FG  F      S ++   K+    ++TKHN ++Q I E     SF   N   
Sbjct: 123 GDVSMIGQFGVGFY-----SAYLVADKV---TVITKHNGDEQYIWESSAGGSFTITNDTS 174

Query: 75  --------RLYGYFFDDERIMMILEYAAHGTLSDLLKKHTKF 108
                   R+  +  +D+     L+Y    TL DL+KKH++F
Sbjct: 175 DNKLQRGTRIILHLKEDQ-----LDYLEERTLRDLVKKHSEF 211



>EAY10281.1 on AAB97088  Hsp90  (Heat shock protein)  [Eimeria tenella]
          Length = 255

 Score = 25.4 bits (54), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 14/98 (14%)

Query: 16  GDVIGEGRFGKVFVAREKKSRFVCVLKIIRKKLLTKHNLEKQLISEIGLHSSFNHPNILR 75
           GD+   G+FG  F +    +  V V+        +KHN ++Q + E     SF      +
Sbjct: 113 GDISMIGQFGVGFYSAYLVADSVTVV--------SKHNDDEQYVWESAAGGSFTVQKDDK 164

Query: 76  LYGYFFDDERIMMIL-----EYAAHGTLSDLLKKHTKF 108
            Y       RI++ L     EY     L DL+KKH++F
Sbjct: 165 -YEPLGRGTRIILHLKEDQGEYLEERRLKDLVKKHSEF 201




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10282.1 Leucine Rich Repeat family protein
[Trichomonas vaginalis G3]
         (547 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_813025   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           32   0.12 
XP_001350797  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   1.8  
XP_001349035  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   2.9  
XP_820147   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   3.2  
XP_001349030  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   5.9  

>EAY10282.1 on XP_813025   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 481

 Score = 31.6 bits (70), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 63/168 (37%), Gaps = 36/168 (21%)

Query: 339 NSIDFRGAAMFSDLFEQNES------------IMTLRLSGNKFGDPSIALMASKLKMNKS 386
           + + F GA     +  Q E+            + TL + G   GD  I LM + +  NK 
Sbjct: 253 DGVTFHGAWAEWPVGRQGENQLYHFANHNFTLVATLSVHGEPKGDTPIPLMGATMNDNKK 312

Query: 387 IKVLELMDVDMTKKG-FTAICHALKENKTLQKLTVSQNNLNSEAMKSLCELLKVNTTLNS 445
             +L L      K+G +  +C      KT ++L +   N   E    +  +L+ N T  S
Sbjct: 313 TVLLGL---SYDKEGKWQVLCGG----KTTKELRI---NWEPETTHQVAIVLR-NGTQGS 361

Query: 446 ISMSGCGIDDQGCA------------YIAEGIGSNASLSYLDISMNNF 481
           + + G  + D  C             YI    GS  S   + ++  NF
Sbjct: 362 VYVDGQRVGDASCELRNADSKGISHFYIGGDGGSAGSKEDVPVTATNF 409



>EAY10282.1 on XP_001350797  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2287

 Score = 28.1 bits (61), Expect = 1.8,   Method: Composition-based stats.
 Identities = 11/29 (37%), Positives = 19/29 (65%)

Query: 502  IDYNNNTNNDQNLGDKIADYLERNNYYQH 530
            +D NN+T N +N  D   +++++NN  QH
Sbjct: 2227 VDSNNSTYNHRNPADINKNFVDKNNQNQH 2255



>EAY10282.1 on XP_001349035  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2239

 Score = 27.3 bits (59), Expect = 2.9,   Method: Composition-based stats.
 Identities = 11/29 (37%), Positives = 18/29 (62%)

Query: 502  IDYNNNTNNDQNLGDKIADYLERNNYYQH 530
            +D NN+T N +N  D   +++ +NN  QH
Sbjct: 2179 VDNNNSTYNHRNPADINKNFVHKNNQNQH 2207



>EAY10282.1 on XP_820147   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 878

 Score = 26.9 bits (58), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 45/225 (20%)

Query: 282 ANKFTRSASSYFSICLNKNTTL-QYLDISRNVIASEGLWPLSVALSGNKELKFLDLRHNS 340
           A+K T     + S  L+ NT   +YL ++  V   EG    +V  + N  +KF       
Sbjct: 499 ADKITAGLVGFLSGKLSGNTWRDEYLGVNATVNNKEGAAAATVTSTENG-VKFTG----- 552

Query: 341 IDFRGAAMFSDLFEQNESIM------TLRLSGNKF-------GDPSIALMASKLKMNKSI 387
              RGA     + +Q E+ +         L    F       GD  I LM +K+  N++ 
Sbjct: 553 ---RGAGAEWPVGKQGENQLYHFANYNFTLVATVFIDNVPQEGDTPIPLMGAKMNGNENN 609

Query: 388 KVLELMDVDMTKKGFTAICHALKENKTLQKLTVSQNNLNSEAMKSLCELLKVNTTLNSIS 447
            +LEL   D  +K      H L  +KT ++L+ +         + +  LLK N T  S+ 
Sbjct: 610 VLLEL-SYDSERK-----WHVLCGDKTPKELSSTWE--TGTPQQHVVVLLK-NGTQGSVY 660

Query: 448 MSGCGIDDQGCA------------YIAEGIGSNASLSYLDISMNN 480
           + G  + ++ CA            YI  G G NA+   + +++ N
Sbjct: 661 VDGQRVGNEECALGNGESKEISHFYIG-GDGENAANKEVSVTVTN 704



>EAY10282.1 on XP_001349030  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2215

 Score = 26.2 bits (56), Expect = 5.9,   Method: Composition-based stats.
 Identities = 11/29 (37%), Positives = 18/29 (62%)

Query: 502  IDYNNNTNNDQNLGDKIADYLERNNYYQH 530
            +D NN+T N +N  D    +++ NN+ QH
Sbjct: 2155 VDSNNSTYNHRNPADINKTFVDINNHNQH 2183




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10284.1 hypothetical protein TVAG_047060 [Trichomonas
vaginalis G3]
         (166 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAX07983  alpha-9 giardin  (Others)  [Giardia duodenalis]              30   0.064
Q4VPP0  Giardin subunit alpha-9  (Others)  [Giardia duodenalis]        30   0.064
XP_001609315  variant erythrocyte surface antigen-1, alpha subun...    25   2.8  
XP_001349738  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   4.0  
XP_001351564  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   4.7  
XP_828100  VSG  (Establishment)  [Trypanosoma brucei]                  24   6.9  

>EAY10284.1 on AAX07983  alpha-9 giardin  (Others)  [Giardia duodenalis]
          Length = 255

 Score = 29.6 bits (65), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 8/69 (11%)

Query: 85  EKYHECSNKFECIFRHELTDRIGTDC------QYYIRGYCKHGDKCKRKHTPRDAVCL-N 137
           E ++E    +  IF+    D + +D          I+G+ KH D+ +RK    DA  L  
Sbjct: 106 EDWYEMGAHYTRIFQKVANDTLLSDIGSSEPWSQLIKGWIKH-DRYERKAISEDAAALMG 164

Query: 138 YLAGFCPDG 146
           YL    PDG
Sbjct: 165 YLESGNPDG 173



>EAY10284.1 on Q4VPP0  Giardin subunit alpha-9  (Others)  [Giardia duodenalis]
          Length = 255

 Score = 29.6 bits (65), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 8/69 (11%)

Query: 85  EKYHECSNKFECIFRHELTDRIGTDC------QYYIRGYCKHGDKCKRKHTPRDAVCL-N 137
           E ++E    +  IF+    D + +D          I+G+ KH D+ +RK    DA  L  
Sbjct: 106 EDWYEMGAHYTRIFQKVANDTLLSDIGSSEPWSQLIKGWIKH-DRYERKAISEDAAALMG 164

Query: 138 YLAGFCPDG 146
           YL    PDG
Sbjct: 165 YLESGNPDG 173



>EAY10284.1 on XP_001609315  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1338

 Score = 25.0 bits (53), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 16/51 (31%)

Query: 7   LQNQQQSLEFKFESVLKE----------------VDQNEENDLKDYINKLS 41
           L N Q++LE K ES + E                VD+N  N+LK+ I +L+
Sbjct: 704 LGNAQEALEGKAESKVIEGVKVALTKAKTELEGVVDENANNELKEKIKELT 754



>EAY10284.1 on XP_001349738  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2162

 Score = 24.6 bits (52), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 24/109 (22%), Positives = 47/109 (43%), Gaps = 27/109 (24%)

Query: 10  QQQSLEFKFESVLKEVDQNEENDLKDYINKLSKKDRNSFHQVVCDKWVNTHCVHGDRCQS 69
           Q ++ +  F+ + K+V +  +N+ ++YI++L  K             ++   + G+R  S
Sbjct: 10  QGETAKHMFDRIGKQVYETVKNEAENYISELEGK-------------LSQATLLGERVSS 56

Query: 70  LHEYDIDRMKKCQFWEKYHECSN----KFECIFRHEL--TDRIGTDCQY 112
           L        K CQ  E Y   +N    ++ C  R  +  +D   + C Y
Sbjct: 57  L--------KTCQLVEDYRSKANGDVKRYPCANRSPVRFSDESRSQCTY 97



>EAY10284.1 on XP_001351564  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2207

 Score = 24.3 bits (51), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 24/109 (22%), Positives = 47/109 (43%), Gaps = 27/109 (24%)

Query: 10  QQQSLEFKFESVLKEVDQNEENDLKDYINKLSKKDRNSFHQVVCDKWVNTHCVHGDRCQS 69
           Q ++ +  F+ + K+V +  +N+ ++YI++L  K             ++   + G+R  S
Sbjct: 10  QGETAKHMFDRIGKQVYETVKNEAENYISELEGK-------------LSQATLLGERVSS 56

Query: 70  LHEYDIDRMKKCQFWEKYHECSN----KFECIFRHEL--TDRIGTDCQY 112
           L        K CQ  E Y   +N    ++ C  R  +  +D   + C Y
Sbjct: 57  L--------KTCQLVEDYRSKANGDVKRYPCANRSPVRFSDESRSQCTY 97



>EAY10284.1 on XP_828100  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 518

 Score = 23.9 bits (50), Expect = 6.9,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 7   LQNQQQSLEFKFESVLKEVDQNEENDLKDYINKLSKKDRNSF 48
           +Q    S   KF +++KE D    +DLK Y+     K  + F
Sbjct: 323 IQEAVASCTKKFTNLVKESDIATNSDLKTYLRTAYGKGTHGF 364




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10287.1 hypothetical protein TVAG_047090 [Trichomonas
vaginalis G3]
         (381 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_829790  VSG  (Establishment)  [Trypanosoma brucei]                  29   0.55 
XP_001611736  variant erythrocyte surface antigen-1, alpha subun...    29   0.55 
XP_001351515  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   4.1  
XP_001351514  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   4.1  

>EAY10287.1 on XP_829790  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 468

 Score = 28.9 bits (63), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%)

Query: 317 AGQLCSWSISMVNSLTRG-PRIQDFRNGIEKLSVSVLRANDTKRYSPEFH 365
           AG  C     +++  T+  PRIQ+F +   KL +   + N+ K Y  E H
Sbjct: 312 AGNSCVKYTGILDGRTKQIPRIQEFEDAATKLELGYAKQNEIKSY--EHH 359



>EAY10287.1 on XP_001611736  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1365

 Score = 28.9 bits (63), Expect = 0.55,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 7/56 (12%)

Query: 233 GADVFNVDRRAFLIAV----RKFLDEGDPGDIPATSKAL---VSDVELALGNVRKR 281
           G D    DR++ +  V    RK + +G+ GD+P   K L   + +V + LGN ++R
Sbjct: 676 GCDPMEHDRKSRVNKVKEELRKVVPQGNSGDLPEALKDLLEKIGEVVVQLGNAQER 731



>EAY10287.1 on XP_001351515  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2181

 Score = 26.2 bits (56), Expect = 4.1,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 19/34 (55%)

Query: 254  EGDPGDIPATSKALVSDVELALGNVRKRWLLQLT 287
            +  PGDIP+ +  L SDV + +     +++ Q T
Sbjct: 2069 DNKPGDIPSDNHVLNSDVSIQIDMGNPKYINQFT 2102



>EAY10287.1 on XP_001351514  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2201

 Score = 26.2 bits (56), Expect = 4.1,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 19/34 (55%)

Query: 254  EGDPGDIPATSKALVSDVELALGNVRKRWLLQLT 287
            +  PGDIP+ +  L SDV + +     +++ Q T
Sbjct: 2089 DNKPGDIPSDNHVLNSDVSIQIDMGNPKYINQFT 2122




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10296.1 hypothetical protein TVAG_491530 [Trichomonas
vaginalis G3]
         (775 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10298.1 hypothetical protein TVAG_491550 [Trichomonas
vaginalis G3]
         (288 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10305.1 hypothetical protein TVAG_491620 [Trichomonas
vaginalis G3]
         (85 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_803204   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   1.1  
XP_816643   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   1.3  
XP_001349437  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   1.4  
XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 23   3.7  
XP_817877   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   6.0  
XP_813587   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   7.1  
XP_804688   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   7.6  
XP_844697  VSG  (Establishment)  [Trypanosoma brucei]                  22   9.2  
XP_811955   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           21   9.3  

>EAY10305.1 on XP_803204   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 700

 Score = 24.3 bits (51), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 20/34 (58%)

Query: 34  PENPQEDSSKNNSASQGIESDSGQRILTPIVTDG 67
           PE+ +ED+S +N+ S  I +D     L+   +DG
Sbjct: 489 PESAKEDTSPDNACSAAIPTDGLVGFLSGNFSDG 522



>EAY10305.1 on XP_816643   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 904

 Score = 24.3 bits (51), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 17/41 (41%)

Query: 9   PSLESISNQEEKGSVSQNDEEPAVDPENPQEDSSKNNSASQ 49
           PS  ++S  EE        EEP     N    S++  +A Q
Sbjct: 750 PSTPAVSESEEPKPAVSESEEPKPAEPNAATSSAREGTADQ 790



>EAY10305.1 on XP_001349437  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2231

 Score = 24.3 bits (51), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)

Query: 38  QEDSSKNNSASQGIESDSGQRILTPIVT-DGVDPLD 72
           +E+ +K+N+  +G E +  Q   T I T DGV+P D
Sbjct: 849 EEEKAKDNTDGKGEEEEDNQGETTQITTQDGVNPCD 884



>EAY10305.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 22.7 bits (47), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 14/53 (26%)

Query: 3    EKNEDAPSLESISNQEE--------------KGSVSQNDEEPAVDPENPQEDS 41
            EKN+   +LE  +N+E+               G +  +D    + PENP ED+
Sbjct: 1898 EKNKSVANLEICTNKEDIKNLLKHVIKLANFSGIIVMSDTNTEITPENPLEDN 1950



>EAY10305.1 on XP_817877   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 900

 Score = 22.3 bits (46), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 17  QEEKGSVSQNDE-EPAVDPENPQEDSSKNNSASQGIESDSG 56
           + E G+ +Q +E +P V   N    SS   S SQG  SD+G
Sbjct: 837 KREGGTDAQEEEVQPQVRKVNATAHSSNLGSLSQGNNSDAG 877



>EAY10305.1 on XP_813587   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 751

 Score = 21.9 bits (45), Expect = 7.1,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 22/60 (36%), Gaps = 2/60 (3%)

Query: 8   APSLESISNQEEKGSVSQNDEEPAVDPENPQEDSSKNNSASQ--GIESDSGQRILTPIVT 65
           APS  +    EE        EEP     N    S++  +A Q     S  G   +T + +
Sbjct: 584 APSTPAEPKSEEPKPAESESEEPKPAEPNAATSSAREGTADQPASATSSDGHEAVTSVTS 643



>EAY10305.1 on XP_804688   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 704

 Score = 21.9 bits (45), Expect = 7.6,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 19/39 (48%)

Query: 41  SSKNNSASQGIESDSGQRILTPIVTDGVDPLDAEPEYNI 79
           +  +++  +G+E + G   L   V D   P D+EP   I
Sbjct: 204 AGSSDAHKEGLEWEWGSMELKLFVGDVTKPTDSEPSQRI 242



>EAY10305.1 on XP_844697  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 342

 Score = 21.6 bits (44), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 24  SQNDEEPAVDPENPQEDSSKNNSASQGIESDS 55
           S  D  PA   E PQ D + N  A+   E D+
Sbjct: 282 STGDNSPAKGTEGPQNDGNPNAQATTSSEKDA 313



>EAY10305.1 on XP_811955   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 92

 Score = 21.2 bits (43), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 21 GSVSQNDEEPAVDPENPQEDSSKNNSASQGI 51
          G   Q DE+   DP+   ED++  N  S GI
Sbjct: 62 GGGVQADEDLPADPKYQLEDTADGNLESFGI 92




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10308.1 NAD dependent epimerase/dehydratase, putative
[Trichomonas vaginalis G3]
         (364 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001350595  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   1.3  
XP_829792  VSG  (Establishment)  [Trypanosoma brucei]                  26   3.5  

>EAY10308.1 on XP_001350595  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2256

 Score = 27.7 bits (60), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 10/90 (11%)

Query: 66  LANEQSVEKTFEIGEGKQFDYVVDLASTTDYGKEKEFYDDRVLKIVSVCGAEAKKRGVKR 125
           L NE++ +   E  E ++ D+  ++    +  KE  FY  +  +    CG +  K G   
Sbjct: 453 LNNEKACKDINE--EKEKIDFTKNVEDDKNINKEGTFYHSQYCQPCPGCGMKKTKNG-NG 509

Query: 126 WIEVSTAQ----VYK--SSTKPATETAALK 149
           W E  T Q    +YK  SS KP TE   LK
Sbjct: 510 WEEKDTNQCNIKLYKPTSSAKP-TEIKILK 538



>EAY10308.1 on XP_829792  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 514

 Score = 26.2 bits (56), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 19/39 (48%), Positives = 21/39 (53%), Gaps = 4/39 (10%)

Query: 134 VYKSSTKPATETAALKPW--TLLAAAKL--EAENILKKL 168
           +YK+ TK   ET A  PW   L  AAKL  E E  L KL
Sbjct: 324 MYKAGTKQELETLATHPWLSQLQTAAKLLHEHEQALSKL 362




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10313.1 hypothetical protein TVAG_491710 [Trichomonas
vaginalis G3]
         (649 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351080  PfEMP1  (Establishment)  [Plasmodium falciparum]         31   0.33 
XP_813500   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   2.1  
XP_001351877  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   2.9  
AAB68611  AP51-3  (Adhesin)  [Trichomonas vaginalis]                   27   4.6  
XP_001610908  RAP-1  (Adhesin)  [Babesia bovis]                        26   7.3  
XP_803420  VSG  (Establishment)  [Trypanosoma brucei]                  26   7.4  

>EAY10313.1 on XP_001351080  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2209

 Score = 30.8 bits (68), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 79/162 (48%), Gaps = 15/162 (9%)

Query: 62   STLSEFNKHIHDIKTRLI-SGFKNQRDLDEFWDTWDKFESSIYNYFSNSTVKSQSKQIRN 120
              L  FNKHIHD K  LI + FK  R L+ F++ +++ +  +     N   K Q  +   
Sbjct: 1439 CVLKNFNKHIHDKKNVLIRTLFK--RWLEYFFEDYNRIQKKLKPCIENGKGKEQ--KCFK 1494

Query: 121  ELESSIDSLQNAKKQVQSSSPQLKRMIREISKDIQDMIKASENVKDFSSSFLQ--QFVDD 178
              + + D ++   ++ +   P++++   E  K+       S++ K    SFL+  QF ++
Sbjct: 1495 GCKENCDCVKKWVEEKEKEWPKIRKRYLEQYKNAG----GSDDYK--VKSFLEDPQFYNE 1548

Query: 179  LN-TIKPRSPTSEFKSKIGISIVLSQKLRDIFKFKEFILPLL 219
            +N  +KP    + F+  I  +   S + +D+ + ++ ++ LL
Sbjct: 1549 VNKAVKPCDDLNAFERSIHCNGPNSSQKKDVER-RDVVVCLL 1589



>EAY10313.1 on XP_813500   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 898

 Score = 28.1 bits (61), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 21/36 (58%)

Query: 530 QQLEDKNSELKKVSGDKKPVLTSEIKKLIQETKKIS 565
           QQLEDK+SE   VS D     TS +   +Q+T  +S
Sbjct: 729 QQLEDKSSEPLTVSSDSVNPNTSPVTAAVQQTGTLS 764



>EAY10313.1 on XP_001351877  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2270

 Score = 27.7 bits (60), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 6/56 (10%)

Query: 138 SSSPQLKRMIREISKDIQDMIKASENVKDFSSSFLQQFVDDLNTIKPRSPTSEFKS 193
           SS+P  K ++  I KD+       E  K  + +++++   DLNT   RS  + + +
Sbjct: 11  SSAPDAKHLLDMIGKDVH------EKAKSEAKNYIEELKGDLNTANGRSSETRYTT 60



>EAY10313.1 on AAB68611  AP51-3  (Adhesin)  [Trichomonas vaginalis]
          Length = 255

 Score = 26.6 bits (57), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 5/58 (8%)

Query: 576 AKTETKSKSLITEEIQEPTEHIKQAYSDFERLN---YEKSLANEEMVKLFKLVTGNDS 630
           AK   K    + + +Q  TE + Q  S    L    YE  +  EEM KL+KL  G+D+
Sbjct: 153 AKHPEKIHKFVLDGVQGITEEVAQTISKKLGLTGKAYENGV--EEMQKLWKLFVGSDA 208



>EAY10313.1 on XP_001610908  RAP-1  (Adhesin)  [Babesia bovis]
          Length = 565

 Score = 26.2 bits (56), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 6/51 (11%)

Query: 550 LTSEIKKLIQETKKISQNFL--SLANQHAK----TETKSKSLITEEIQEPT 594
           +T   KK I++T ++++N+L  ++A    K    T  K+K  + E + EPT
Sbjct: 314 VTQPTKKFIEDTNEVTKNYLKANVAEPTKKFMQDTHEKTKGYLKENVAEPT 364



>EAY10313.1 on XP_803420  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 526

 Score = 26.2 bits (56), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 14/76 (18%)

Query: 537 SELKKVSGDKKPVLTSEIKKLIQE---TKKISQNFL------SLANQHAKTETKSKSLIT 587
           ++L+K+ G  K   T +  K++     T  I   F+      ++ N++A+     K+LI 
Sbjct: 349 AQLQKLYGGDKQNFTRDFVKVLWTKNVTYHIGSGFVTETLLDAVRNKNAQ-----KALIY 403

Query: 588 EEIQEPTEHIKQAYSD 603
            E Q PTE  KQA SD
Sbjct: 404 LEDQRPTEEAKQAQSD 419




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10314.1 Leucine Rich Repeat family protein
[Trichomonas vaginalis G3]
         (726 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001349513  PfEMP1  (Establishment)  [Plasmodium falciparum]         30   0.83 
XP_001351876  PfEMP1  (Establishment)  [Plasmodium falciparum]         29   1.2  
XP_803401  VSG  (Establishment)  [Trypanosoma brucei]                  28   2.6  
XP_966151  TLP  (Invasion)  [Plasmodium falciparum]                    26   8.5  

>EAY10314.1 on XP_001349513  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2858

 Score = 29.6 bits (65), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 13/43 (30%), Positives = 23/43 (53%)

Query: 519  IPQSFKIISKYSFLYCKKLKSIIFSETNSLDSFSINSISECES 561
            IPQ F+ +S++S  YC   K ++ +  N  +    N  ++CE 
Sbjct: 1909 IPQPFRWLSEWSETYCLAQKDLLETMKNCENCMKKNKNADCEQ 1951



>EAY10314.1 on XP_001351876  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3164

 Score = 28.9 bits (63), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 12/135 (8%)

Query: 519  IPQSFKIISKYSFLYCKKLKSIIFSETNSLDSFS-INSISECESLANISNFSSYKYKC-- 575
            IPQ F+ ++++S  YCK LK  +        S     + ++C++  + +     K +C  
Sbjct: 2728 IPQRFRWMTEWSEYYCKALKVELEKLEKLEKSCDHCKTTNKCKNDYDKNKCEKCKTRCQQ 2787

Query: 576  IDNTLYYKNNTKWELIFHLSSSKDKELNISCDVICSYSFNSSNNIEKINITSDSVSVIEK 635
             DN +      KW+ +F + S K KEL    D   S   +  N ++K+    +  SV   
Sbjct: 2788 YDNFI-----LKWKTLFDIQSKKYKELYEPIDTKNSTYDHVENFVQKLKKYKNECSVESV 2842

Query: 636  ----HSFNNCLNLKY 646
                H  + CLN K+
Sbjct: 2843 SEYLHETSKCLNYKF 2857



>EAY10314.1 on XP_803401  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 493

 Score = 27.7 bits (60), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 38/178 (21%), Positives = 70/178 (39%), Gaps = 16/178 (8%)

Query: 298 ELIIFPN---STMTVSRSDFVT--NNLPKVNLSFTCKTLFYSSSIYRNTNVSISYLNEPN 352
           +L I P    +++T  R    T  N + K N    CK    + ++     ++++ +  P 
Sbjct: 4   KLGIAPTLLIASLTSPRPGEATAGNAIKKANWQAICKVTADAGNL---AGIALTNIRAPA 60

Query: 353 LIITPDCLIMNSDQTIIYEYWGYNSDSIDIPKSVTKINEKAFENSTVKNFNFPEDTQITY 412
           L +  D   +   +T+IY       +S +      +         T +N  +   T +  
Sbjct: 61  LQVAADIKALL--RTLIY----IEGNSTNAATKAQRTATAFLGGQTAENLEYYSSTSVAT 114

Query: 413 IGKDAFRNCSDLRSFNYSFPKLQALGMSSFKDCI-NLESFTFSSPNLTVMSNAFENCR 469
               A RN   L+   + F  +QA G +S   CI + ES T +    + +  A  NC+
Sbjct: 115 DVTTA-RNAGRLQGATHEFMSVQADGSTSANGCIGDDESGTNALAGFSAVVAADPNCQ 171



>EAY10314.1 on XP_966151  TLP  (Invasion)  [Plasmodium falciparum]
          Length = 1371

 Score = 26.2 bits (56), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 12/85 (14%)

Query: 599 DKELNISCDVICSYSFNSSNNIEKI-NITSDSVSVIEKHSFNNCLNLKYINFPLSVSDVE 657
           D E N   D   SY F S  NIE+  N+  D+     K S+ N  +LK +N+      V 
Sbjct: 101 DNENNYDKDNNSSYKFGSDKNIEEFRNVVLDTKL---KSSYKNSAHLKALNY------VG 151

Query: 658 IDAFH--ECKSIRCPLIIENTSTDY 680
           +  F+  E +S++  ++  NT  DY
Sbjct: 152 LKHFYNSEKESVKMVVMFMNTDGDY 176




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10316.1 hypothetical protein TVAG_491740 [Trichomonas
vaginalis G3]
         (414 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10323.1 hypothetical protein TVAG_491810 [Trichomonas
vaginalis G3]
         (928 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAX07981  alpha-11 giardin  (Others)  [Giardia duodenalis]             28   1.9  

>EAY10323.1 on AAX07981  alpha-11 giardin  (Others)  [Giardia duodenalis]
          Length = 255

 Score = 28.1 bits (61), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 4/70 (5%)

Query: 449 GPANPEFQVHIE--REESLHLFPMRWSLHPKQEVTSSIVIVGNTEGVASFLYKLI-SVPY 505
           G A PE +  +E   EE L  F  RWS   ++E+ +        E +A FL K I + PY
Sbjct: 4   GDAIPEVKAILEAKNEEELVTFTSRWSAEERKELRTQFQDTTGLEFIA-FLKKCIKNGPY 62

Query: 506 LHFSALHVVC 515
               AL   C
Sbjct: 63  EDVMALGWDC 72




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10325.1 hypothetical protein TVAG_491830 [Trichomonas
vaginalis G3]
         (490 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_810237   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   3.4  

>EAY10325.1 on XP_810237   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 922

 Score = 26.9 bits (58), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 10/25 (40%), Positives = 15/25 (60%)

Query: 297 IQAEDLGEEFFTKFEQTELNPLSHF 321
           +  E +GE+   + E TE N +SHF
Sbjct: 656 VDGERVGEDAQCELETTESNEISHF 680




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10332.1 hypothetical protein TVAG_491900 [Trichomonas
vaginalis G3]
         (566 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001349533  PfEMP3  (Establishment)  [Plasmodium falciparum]         48   1e-06
XP_001350954  RESA  (Others)  [Plasmodium falciparum]                  27   5.1  
AAW71461  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]          26   7.1  
AAW71462  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]          26   7.1  
AAW71460  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]          26   7.1  
AAW71459  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]          26   7.3  
AAW71463  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]          26   7.3  
XP_001611206  variant erythrocyte surface antigen-1, alpha subun...    26   7.7  

>EAY10332.1 on XP_001349533  PfEMP3  (Establishment)  [Plasmodium falciparum]
          Length = 2441

 Score = 48.1 bits (113), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 35/62 (56%)

Query: 454  DSSEDDISTKDLSENDISTKDLSENDISTKNLSENDISTKNLSENDISTKDLSEDDISTK 513
            D   +DI  KDLS  D+  K+L   DIS K++   ++  K+LS  D+  K+L   DI  K
Sbjct: 1255 DLKNNDIQNKDLSNKDMKNKELLNKDISNKDMKNKELLNKDLSNEDMKNKELLNKDIRNK 1314

Query: 514  DL 515
            DL
Sbjct: 1315 DL 1316




 Score = 47.8 bits (112), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/67 (38%), Positives = 36/67 (53%)

Query: 457  EDDISTKDLSENDISTKDLSENDISTKNLSENDISTKNLSENDISTKDLSEDDISTKDLS 516
            E+  +  DL  NDI  KDLS  D+  K L   DIS K++   ++  KDLS +D+  K+L 
Sbjct: 1248 ENVYTNNDLKNNDIQNKDLSNKDMKNKELLNKDISNKDMKNKELLNKDLSNEDMKNKELL 1307

Query: 517  EDYISTK 523
               I  K
Sbjct: 1308 NKDIRNK 1314




 Score = 45.8 bits (107), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/72 (36%), Positives = 37/72 (51%)

Query: 462  TKDLSENDISTKDLSENDISTKNLSENDISTKNLSENDISTKDLSEDDISTKDLSEDYIS 521
            ++ L EN  +  DL  NDI  K+LS  D+  K L   DIS KD+   ++  KDLS + + 
Sbjct: 1243 SEGLKENVYTNNDLKNNDIQNKDLSNKDMKNKELLNKDISNKDMKNKELLNKDLSNEDMK 1302

Query: 522  TKVSTEDNISTK 533
             K     +I  K
Sbjct: 1303 NKELLNKDIRNK 1314




 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/53 (41%), Positives = 29/53 (54%)

Query: 453  KDSSEDDISTKDLSENDISTKDLSENDISTKNLSENDISTKNLSENDISTKDL 505
            KD S  D+  K+L   DIS KD+   ++  K+LS  D+  K L   DI  KDL
Sbjct: 1264 KDLSNKDMKNKELLNKDISNKDMKNKELLNKDLSNEDMKNKELLNKDIRNKDL 1316




 Score = 39.7 bits (91), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/88 (27%), Positives = 48/88 (54%), Gaps = 1/88 (1%)

Query: 452  GKDSSEDDISTKDLSENDISTKDLSENDISTKNLSENDISTKNLSENDISTKDLSEDDIS 511
            G +  +++   K+    +  ++ L EN  +  +L  NDI  K+LS  D+  K+L   DIS
Sbjct: 1223 GSEGLKENAELKNKELRNKGSEGLKENVYTNNDLKNNDIQNKDLSNKDMKNKELLNKDIS 1282

Query: 512  TKDL-SEDYISTKVSTEDNISTKVSTED 538
             KD+ +++ ++  +S ED  + ++  +D
Sbjct: 1283 NKDMKNKELLNKDLSNEDMKNKELLNKD 1310




 Score = 37.4 bits (85), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 32/63 (50%)

Query: 450  LLGKDSSEDDISTKDLSENDISTKDLSENDISTKNLSENDISTKNLSENDISTKDLSEDD 509
            L   D    D+S KD+   ++  KD+S  D+  K L   D+S +++   ++  KD+   D
Sbjct: 1256 LKNNDIQNKDLSNKDMKNKELLNKDISNKDMKNKELLNKDLSNEDMKNKELLNKDIRNKD 1315

Query: 510  IST 512
            + +
Sbjct: 1316 LKS 1318




 Score = 32.0 bits (71), Expect = 0.12,   Method: Composition-based stats.
 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 4/71 (5%)

Query: 424  DISATDDDKKTALDYAVENDFDEIIKLLGKDSSEDDISTKDLSENDISTKDLSENDISTK 483
            D+S  D   K  L+  + N   +  +LL KD S +D+  K+L   DI  KDL     S  
Sbjct: 1265 DLSNKDMKNKELLNKDISNKDMKNKELLNKDLSNEDMKNKELLNKDIRNKDLK----SIG 1320

Query: 484  NLSENDISTKN 494
            N+ + +   KN
Sbjct: 1321 NMEQQNTGLKN 1331



>EAY10332.1 on XP_001350954  RESA  (Others)  [Plasmodium falciparum]
          Length = 654

 Score = 26.6 bits (57), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 31/53 (58%)

Query: 461 STKDLSENDISTKDLSENDISTKNLSENDISTKNLSENDISTKDLSEDDISTK 513
           +TK+ S +  +TK+ S +  +TK  S +  +TK  S +  +TK+ S  + +TK
Sbjct: 543 ATKEASTSKEATKEASTSKEATKEASTSKEATKEASTSKGATKEASTTEGATK 595



>EAY10332.1 on AAW71461  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]
          Length = 448

 Score = 25.8 bits (55), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 4/59 (6%)

Query: 192 IGGNTDIINECLKKQKIDESCFRFIVESHNDQFLDYIFQRNLYVPEKDYYDSAIDSQNL 250
           IG    ++ E  K+ KID + F F +  H D+ + Y+    +   E D+Y+  +  + L
Sbjct: 254 IGSIDPVVVELKKQNKIDNALFTFYLPVH-DKHVGYLTIGGI---ESDFYEGPLTYEKL 308



>EAY10332.1 on AAW71462  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]
          Length = 448

 Score = 25.8 bits (55), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 4/59 (6%)

Query: 192 IGGNTDIINECLKKQKIDESCFRFIVESHNDQFLDYIFQRNLYVPEKDYYDSAIDSQNL 250
           IG    ++ E  K+ KID + F F +  H D+ + Y+    +   E D+Y+  +  + L
Sbjct: 254 IGSIDPVVVELKKQNKIDNALFTFYLPVH-DKHVGYLTIGGI---ESDFYEGPLTYEKL 308



>EAY10332.1 on AAW71460  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]
          Length = 448

 Score = 25.8 bits (55), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 4/59 (6%)

Query: 192 IGGNTDIINECLKKQKIDESCFRFIVESHNDQFLDYIFQRNLYVPEKDYYDSAIDSQNL 250
           IG    ++ E  K+ KID + F F +  H D+ + Y+    +   E D+Y+  +  + L
Sbjct: 254 IGSIDPVVVELKKQNKIDNALFTFYLPVH-DKHVGYLTIGGI---ESDFYEGPLTYEKL 308



>EAY10332.1 on AAW71459  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]
          Length = 448

 Score = 25.8 bits (55), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 4/59 (6%)

Query: 192 IGGNTDIINECLKKQKIDESCFRFIVESHNDQFLDYIFQRNLYVPEKDYYDSAIDSQNL 250
           IG    ++ E  K+ KID + F F +  H D+ + Y+    +   E D+Y+  +  + L
Sbjct: 254 IGSIDPVVVELKKQNKIDNALFTFYLPVH-DKHVGYLTIGGI---ESDFYEGPLTYEKL 308



>EAY10332.1 on AAW71463  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]
          Length = 448

 Score = 25.8 bits (55), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 4/59 (6%)

Query: 192 IGGNTDIINECLKKQKIDESCFRFIVESHNDQFLDYIFQRNLYVPEKDYYDSAIDSQNL 250
           IG    ++ E  K+ KID + F F +  H D+ + Y+    +   E D+Y+  +  + L
Sbjct: 254 IGSIDPVVVELKKQNKIDNALFTFYLPVH-DKHVGYLTIGGI---ESDFYEGPLTYEKL 308



>EAY10332.1 on XP_001611206  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1285

 Score = 25.8 bits (55), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 14/97 (14%)

Query: 366  GLAILHVAAKFNCIDAIKLLISHG---------AIIDERDRDKKTALIYAAKNNCKETLE 416
            G  + + ++  +C   + +L  HG             + D DK    I   K N ++  E
Sbjct: 1122 GTPLCNCSSIVSCTGVLPVLYRHGFSYGNPFNLEGYQQNDTDKGDYSI-DNKQNPRQCHE 1180

Query: 417  FLISHGADISATDDDKKTALDYAVENDFDEIIKLLGK 453
            FL S GA I     D+ T    + E+   E++K +GK
Sbjct: 1181 FLSSLGAVIDKNKQDQAT----SQEHPLTELLKQVGK 1213




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10333.1 hypothetical protein TVAG_491910 [Trichomonas
vaginalis G3]
         (902 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_822022   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   3.1  
XP_001349035  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   3.5  
XP_815117   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   3.8  
XP_803953   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   5.4  
XP_001608670  variant erythrocyte surface antigen-1, alpha subun...    27   7.5  
XP_001609040  variant erythrocyte surface antigen-1, alpha subun...    27   7.5  
XP_805533   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   8.1  
XP_001609041  variant erythrocyte surface antigen-1, alpha subun...    27   8.1  

>EAY10333.1 on XP_822022   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 791

 Score = 28.1 bits (61), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 3/73 (4%)

Query: 615 IQIGQPIGDEDNIAAATLYAINMMEAKQKQETEKKIE--EIINGHRTSLLKISKKMKMET 672
           + IG P+ +ED++AA+ L   ++    Q  + EK I   E   G R+S   +S ++  + 
Sbjct: 408 VDIG-PVSEEDDVAASALLYKSVKSGDQGNKEEKLIALYEKKGGGRSSPGMVSVRLAAQL 466

Query: 673 SEYKDVKKAVKKL 685
              K+V    KK+
Sbjct: 467 KRVKEVLATWKKV 479



>EAY10333.1 on XP_001349035  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2239

 Score = 27.7 bits (60), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 5/48 (10%)

Query: 265  LSMYQSLVLTALN-DIIVGINSAFS----WDDDFNPINADVSKITENI 307
            L   ++  L  +N ++I G N        W D F+ I+ D  KITENI
Sbjct: 1362 LDYCKTCPLNGVNCNVIRGTNGCIENRQKWKDVFDKIHKDNEKITENI 1409



>EAY10333.1 on XP_815117   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 825

 Score = 27.7 bits (60), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 14/46 (30%), Positives = 28/46 (60%), Gaps = 5/46 (10%)

Query: 288 SWDDDFNPINADVSKITENIKEVIKLIELPPAIVKPLKKISNVQSN 333
           +W+D++  +NA V+K T+ +K+  +L E    ++ P+    N+Q N
Sbjct: 524 TWNDEYLCLNATVTKATK-VKDGFQLTEPESGVIWPV----NIQGN 564



>EAY10333.1 on XP_803953   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1027

 Score = 27.3 bits (59), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 24/70 (34%)

Query: 35  SPKFSPHGKAFSKDTTQQGPDLTAVSEQRIHDMTEDLKTIKERMRRILKYNHAQIFTDLH 94
           SP+F+P G+   K++ Q+G DL           T+DL++ +           +  F D+ 
Sbjct: 804 SPQFTPTGE---KESMQRGSDL----------QTQDLQSAE-----------STEFNDVE 839

Query: 95  VLSELNDTDQ 104
           + SE NDT+Q
Sbjct: 840 MSSESNDTEQ 849



>EAY10333.1 on XP_001608670  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1320

 Score = 26.6 bits (57), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 23/133 (17%), Positives = 52/133 (39%), Gaps = 22/133 (16%)

Query: 435 RMEAEKANFESEITVRNEDLEERNDELLRQINE---------TLSIAKRREEQLFQMRAT 485
           ++E  K   E+E+T   + L  +  E  +++ E         + SIA           A+
Sbjct: 723 KLEEAKGKLETELTKVKDRLNGKLQEATKKLGELTKGSGGKESGSIASVTGSDGLDKAAS 782

Query: 486 DEDGKMKRCLKTIIKRMNEMIDESEQDFSFSNDDLVTRA-------------DKLSQFIS 532
           D+  + K  +  +I ++ E + E +++   SN   +  +             D++    +
Sbjct: 783 DDFDQGKNRISEVIHKVREALKEIQKELGVSNSSYLNGSLSEWVANTLHKTIDQIKDICN 842

Query: 533 KRRCPKCRDREVE 545
             +CP C+    +
Sbjct: 843 SPKCPSCKSHSTK 855



>EAY10333.1 on XP_001609040  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1335

 Score = 26.6 bits (57), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 29/151 (19%), Positives = 61/151 (40%), Gaps = 40/151 (26%)

Query: 392 GEVKTNIAKVIQQKEEMQKEYSAFQDKVRYQSRTITNIMKERVRMEAEKANFESEITVRN 451
           G    ++ +++   +E +K+YS+ +D++   S  I  + K                    
Sbjct: 745 GNTPGSLQQIVDSGQEWRKDYSSAKDRI---SEAIDGLHKV------------------- 782

Query: 452 EDLEERNDELLRQINETLSIAKRREEQLFQMRATDEDGKMKRCLKTIIKRMNEMIDESEQ 511
             LE   + + +QI E    AK+  +  F++  T+++ K++  LK              Q
Sbjct: 783 --LEILKEGVEKQIKEEAKEAKKTLDVFFKL--TNDENKLENVLK--------------Q 824

Query: 512 DFSFSNDDLVTRADKLSQFISKRRCPKCRDR 542
           + S+    L+   ++L    +  +CP C D 
Sbjct: 825 ELSYDYTALLNAINQLISICNSPKCPPCNDH 855



>EAY10333.1 on XP_805533   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 794

 Score = 26.6 bits (57), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 5/62 (8%)

Query: 263 SQLSMYQSLVLTALNDIIVGINSAFSWDDDFNPINADVSKITENIKEVIKLIELPPAIVK 322
           S  S+  + ++  L+D      S  +W+DD+  +NA V   T+ +K+ +KL E    ++ 
Sbjct: 491 SSFSIPTAGLVAVLSDAA----SGDTWNDDYLCLNATVRNATK-VKDGLKLTESDSGVIW 545

Query: 323 PL 324
           P+
Sbjct: 546 PV 547



>EAY10333.1 on XP_001609041  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1318

 Score = 26.6 bits (57), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 63/139 (45%), Gaps = 13/139 (9%)

Query: 573 KDRARLMRENMVLQREVKEKTELINQMKVATQDL-----KGKIRELSIQIG---QPIGDE 624
           KD+  +      L++  +E  E + Q+K A ++      K K+ EL+   G      G+ 
Sbjct: 711 KDKGAIEGVKRELEKAKEELVEAVKQVKDAVENCGLEEAKNKLEELTGNGGLDKANSGEY 770

Query: 625 D----NIAAATLYAINMMEAKQKQETEKKIEEIINGHRTSLLKISKKMKMETSEYKDVKK 680
           D     I+AA       +EA  K+E EK+++E++   ++ +  I+K    E + YK VK+
Sbjct: 771 DPGKNKISAAIDGVCKALEA-LKKEMEKQLKEVLEKEQSDMDDITKWFIREKTFYKAVKE 829

Query: 681 AVKKLYRDHCELVKENEEK 699
            +       C   + +  K
Sbjct: 830 LISICNSPKCSACESHSTK 848




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10348.1 hypothetical protein TVAG_109320 [Trichomonas
vaginalis G3]
         (913 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001348153  MAEBL  (Adhesin)  [Plasmodium falciparum]                27   6.5  

>EAY10348.1 on XP_001348153  MAEBL  (Adhesin)  [Plasmodium falciparum]
          Length = 2054

 Score = 26.9 bits (58), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 4/41 (9%)

Query: 228 EHISEIDSWAFRNTKLQ-SIELP--NSNLKLYNGAFCQCPF 265
           E ++EI S+ F N K +  IE+P   S L +Y G F +CP+
Sbjct: 108 EFLNEI-SFGFLNKKYKLPIEIPLNKSGLSMYQGLFKRCPY 147




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10349.1 hypothetical protein TVAG_109330 [Trichomonas
vaginalis G3]
         (452 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10351.1 hypothetical protein TVAG_109350 [Trichomonas
vaginalis G3]
         (472 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10354.1 WD repeat protein, putative [Trichomonas
vaginalis G3]
         (222 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351439  PfEMP1  (Establishment)  [Plasmodium falciparum]         29   0.26 
XP_001351438  PfEMP1  (Establishment)  [Plasmodium falciparum]         29   0.27 
XP_001610721  variant erythrocyte surface antigen-1, alpha subun...    28   0.42 
XP_001610568  variant erythrocyte surface antigen-1, alpha subun...    26   1.7  
XP_001608665  variant erythrocyte surface antigen-1, alpha subun...    26   2.0  
XP_001609040  variant erythrocyte surface antigen-1, alpha subun...    26   2.6  
XP_001609163  variant erythrocyte surface antigen-1, alpha subun...    25   3.8  
XP_001609101  variant erythrocyte surface antigen-1, alpha subun...    25   3.9  
XP_001351435  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   4.2  
XP_001349740  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   4.9  

>EAY10354.1 on XP_001351439  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2326

 Score = 28.9 bits (63), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 5/47 (10%)

Query: 43   EDEENNQPMPQVPQDNQPVVV-----KYNEVVDDFVRNFLKKMNMTE 84
            E   NN P   +P DN P        ++N++  DF+ N L+    TE
Sbjct: 1952 EPSGNNTPTSDIPSDNTPTPQPITDDEWNQLKHDFISNMLQNTQNTE 1998



>EAY10354.1 on XP_001351438  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2312

 Score = 28.9 bits (63), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 5/47 (10%)

Query: 43   EDEENNQPMPQVPQDNQPVVV-----KYNEVVDDFVRNFLKKMNMTE 84
            E   NN P   +P DN P        ++N++  DF+ N L+    TE
Sbjct: 1938 EPSGNNTPTSDIPSDNTPTPQPITDDEWNQLKHDFISNMLQNTQNTE 1984



>EAY10354.1 on XP_001610721  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1331

 Score = 28.1 bits (61), Expect = 0.42,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 8/73 (10%)

Query: 117 EQMEQERKKWQTVRDEVQQTWDRLKQERNYHRDGLEALEKEKKDLTEDLRKMKKTRKRLD 176
           +Q+    ++W+    +     DR+ +  +  RD LEAL+ E KD    L+         D
Sbjct: 775 QQISNSGQEWEK---DYSSAKDRISEAISKVRDALEALKNELKDKNSMLKG-----GLAD 826

Query: 177 PALAELQQKFEQV 189
            A A+ QQ  +Q+
Sbjct: 827 WATAKFQQAIDQI 839



>EAY10354.1 on XP_001610568  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1329

 Score = 26.2 bits (56), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 20/33 (60%)

Query: 131 DEVQQTWDRLKQERNYHRDGLEALEKEKKDLTE 163
           ++  Q  +++ +  N  RD LEALEK  KDL +
Sbjct: 768 NDFDQGKNKISEAINGVRDALEALEKGVKDLIK 800



>EAY10354.1 on XP_001608665  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1326

 Score = 26.2 bits (56), Expect = 2.0,   Method: Composition-based stats.
 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 2/38 (5%)

Query: 152 EALEKEKKDLTEDLRKMKKTRKR--LDPALAELQQKFE 187
           EA+EK K++LTE   K++   K+  L   LAE  +K E
Sbjct: 725 EAIEKVKEELTEAKTKLEDAVKKDGLTGKLAEATKKLE 762



>EAY10354.1 on XP_001609040  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1335

 Score = 25.8 bits (55), Expect = 2.6,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 11/83 (13%)

Query: 112 IKQKTEQMEQERKKWQTVRDEVQQTWDRLKQERNYHRDGLEALEKEKKDLTEDLRKMKKT 171
           ++Q  +  ++ RK + + +D + +  D L +     ++G+E      K + E+ ++ KKT
Sbjct: 751 LQQIVDSGQEWRKDYSSAKDRISEAIDGLHKVLEILKEGVE------KQIKEEAKEAKKT 804

Query: 172 RKRLDP--ALAELQQKFEQVNKE 192
              LD    L   + K E V K+
Sbjct: 805 ---LDVFFKLTNDENKLENVLKQ 824



>EAY10354.1 on XP_001609163  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1360

 Score = 25.4 bits (54), Expect = 3.8,   Method: Composition-based stats.
 Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 3/39 (7%)

Query: 148 RDGLEALEKEKKDL---TEDLRKMKKTRKRLDPALAELQ 183
           ++ ++ALE+ KK L    E L + KKT++ L+ A  EL+
Sbjct: 734 KEKVKALEEIKKTLEAAKEKLEEAKKTQEALEAAKGELE 772



>EAY10354.1 on XP_001609101  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1359

 Score = 25.0 bits (53), Expect = 3.9,   Method: Composition-based stats.
 Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 3/39 (7%)

Query: 148 RDGLEALEKEKKDL---TEDLRKMKKTRKRLDPALAELQ 183
           ++ ++ALE+ KK L    E L + KKT++ L+ A  EL+
Sbjct: 734 KEKVKALEEIKKTLEAAKEKLEEAKKTQEALEAAKGELE 772



>EAY10354.1 on XP_001351435  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2209

 Score = 25.0 bits (53), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 5/60 (8%)

Query: 54   VPQDNQPVVV-----KYNEVVDDFVRNFLKKMNMTETLATFQHEWYSTERPNLFCDLTEE 108
            +P DN P        ++N + D+F+ N L+    TE      +  Y+T    L+ D  EE
Sbjct: 1872 IPNDNTPANKPITDEEWNTLKDEFISNMLQSTQNTEPNILHDNMHYNTHPNTLYFDKHEE 1931



>EAY10354.1 on XP_001349740  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3346

 Score = 25.0 bits (53), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 5/58 (8%)

Query: 112  IKQKTEQMEQERKKWQTVRDEVQQTWDRLKQERNYHRDGLEALEKEKKDLTEDLRKMK 169
            I +K E+ +++ KK++   D+V+   D +     Y +D LE L+++ K +   L K+K
Sbjct: 1897 ISRKKEEFDKQSKKYENEIDDVKHNSDNI-----YGKDFLETLDQQYKSVELFLEKVK 1949




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10359.1 Ser/Thr protein phosphatase, putative
[Trichomonas vaginalis G3]
         (328 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_809181   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.14 
XP_809179   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.21 

>EAY10359.1 on XP_809181   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 665

 Score = 30.4 bits (67), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 16/115 (13%)

Query: 21  NGKIQKKLLKFLTIDYCLWLNEQVRLILKE-EPNVVYLEGKFVIVGDLHGNFNDLDRILS 79
           +GKI+K     L I +      QV ++L+       Y++GK V          D+ R L 
Sbjct: 451 DGKIKK-----LKITWETRTQYQVAIVLRNGNQGFAYVDGKRVC--------GDVQRSLD 497

Query: 80  NTWKKENIKFVFLGDYVDRGHYSYEVISLLFTMKLLFPNRVLLLRGNHENQDVTE 134
           NT  K    F   GD    G  S E +S+  T  LL+   +    GN E ++VT+
Sbjct: 498 NTDSKGISHFYIGGDGSSAG--SKEDVSVTVTNVLLYNRPLTFSGGNAEVEEVTD 550



>EAY10359.1 on XP_809179   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 853

 Score = 30.0 bits (66), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 11/93 (11%)

Query: 43  QVRLILKE-EPNVVYLEGKFVIVGDLHGNFNDLDRILSNTWKKENIKFVFLGDYVDRGHY 101
           QV ++L+       Y++GK V          D+ R L NT  K    F   GD    G  
Sbjct: 656 QVAIVLRNGNQGTAYVDGKRVC--------GDVQRSLDNTDSKGISHFYIGGDGSSAG-- 705

Query: 102 SYEVISLLFTMKLLFPNRVLLLRGNHENQDVTE 134
           S E +S+  T  LL+   +    GN E ++VT+
Sbjct: 706 SKEDVSVTVTNVLLYNRPLTFSGGNAEVEEVTD 738




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10363.1 membrane protein, putative [Trichomonas
vaginalis G3]
         (255 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_814820   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   9.9  

>EAY10363.1 on XP_814820   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 611

 Score = 24.3 bits (51), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 9/31 (29%), Positives = 19/31 (61%)

Query: 205 QGYSDPIRIFVQGWINSPGHRRNLLGDYTHM 235
           QG ++P  + V+G +   G ++ L+ + TH+
Sbjct: 197 QGKNEPTLLLVKGTVTVDGGKKKLVWNETHV 227




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10366.1 hypothetical protein TVAG_109500 [Trichomonas
vaginalis G3]
         (707 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001608670  variant erythrocyte surface antigen-1, alpha subun...    27   3.6  

>EAY10366.1 on XP_001608670  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1320

 Score = 27.3 bits (59), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 509 TADDFTIKLAAAISNY--SRQCMYYIYEGAAAKQGKFKNTSTRHL 551
           + D+    LAAA+++   S Q  Y+ Y+G A   G  +   T+HL
Sbjct: 39  SGDECICGLAAAVTDLLQSVQLQYHGYQGEAKDNGASQQDVTKHL 83




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10367.1 hypothetical protein TVAG_109510 [Trichomonas
vaginalis G3]
         (1425 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_802427   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           39   0.002
XP_802771   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           33   0.068
XP_966305  PfEMP1  (Establishment)  [Plasmodium falciparum]            32   0.39 
XP_806228   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           32   0.45 
XP_821088   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   1.3  
XP_810753   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   1.7  
XP_821548   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   1.8  
XP_844699  VSG  (Establishment)  [Trypanosoma brucei]                  29   1.8  
XP_810286   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   1.9  
XP_807798   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   2.7  
XP_806427   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   3.3  
XP_818193   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   5.4  
XP_001350954  RESA  (Others)  [Plasmodium falciparum]                  28   5.4  
XP_807431   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   7.7  

>EAY10367.1 on XP_802427   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 390

 Score = 38.9 bits (89), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/168 (22%), Positives = 69/168 (41%), Gaps = 3/168 (1%)

Query: 1226 SPAIEAPISSRVSSPRDTNFTPTKKSSIDDSLLNTPSPMKKASEMPASPKISPMKSLQKN 1285
            S   ++   S  S+P D++   T  +  D S  +TPS    +S   ++P      S    
Sbjct: 104  STPADSSAHSTPSTPADSSAHSTPSAPADSSAHSTPSTPADSSAH-STPSTPADSSAHST 162

Query: 1286 KNPPKEENVTSTILTPTKNGGMSPTRLEIISQTRGSPVAQALSTALSTSTKEKTKKTKGS 1345
             + P + +  ST  TP  NG  S       S    +P   A S+A ST +         +
Sbjct: 163  PSTPADSSAHSTPSTPADNGAHSTPSAPADSSAHSTPSTPADSSAHSTPSTPADSSAHST 222

Query: 1346 SSSVSTNNSTTSSTRVTEKAKKSSLTTSTNSS--TTTKAKARTSKNST 1391
             S+ + +++ ++ +   +    S+ +T  +SS  +T    A    +ST
Sbjct: 223  PSTPADSSAHSTPSTPADNGAHSTPSTPGDSSAHSTPSTPADNGAHST 270




 Score = 31.6 bits (70), Expect = 0.34,   Method: Composition-based stats.
 Identities = 46/242 (19%), Positives = 89/242 (36%), Gaps = 7/242 (2%)

Query: 1120 DSISTSNIVNSPNSRSKSILNNSVEASEILSPTKSLNESMNKTQNESFNTTQNDSILSTR 1179
            DS + S      +S + S  +   ++S   +P+   + S + T +    T  + S  ST 
Sbjct: 108  DSSAHSTPSTPADSSAHSTPSAPADSSAHSTPSTPADSSAHSTPS----TPADSSAHSTP 163

Query: 1180 RVLNDSASKRMPRKSLNNNENKITISALPKEDQS--PVQITRSPYKVLSPAIEAPISSRV 1237
                DS++   P    +N  +    +       S        S +   S   ++   S  
Sbjct: 164  STPADSSAHSTPSTPADNGAHSTPSAPADSSAHSTPSTPADSSAHSTPSTPADSSAHSTP 223

Query: 1238 SSPRDTNFTPTKKSSIDDSLLNTPSPMKKASEMPASPKISPMKSLQKNKNPPKEENVTST 1297
            S+P D++   T  +  D+   +TPS    +S   ++P            + P +    ST
Sbjct: 224  STPADSSAHSTPSTPADNGAHSTPSTPGDSSAH-STPSTPADNGAHSTPSAPGDNGAHST 282

Query: 1298 ILTPTKNGGMSPTRLEIISQTRGSPVAQALSTALSTSTKEKTKKTKGSSSSVSTNNSTTS 1357
             LTP  NG  S       +    +P+    + A ST +         + S+ + N + ++
Sbjct: 283  PLTPGDNGAHSTPSAPGDNGAHSTPLTPGDNGAHSTPSTPGDNGAHSTPSAPADNGAHST 342

Query: 1358 ST 1359
             +
Sbjct: 343  PS 344




 Score = 27.3 bits (59), Expect = 6.3,   Method: Composition-based stats.
 Identities = 50/245 (20%), Positives = 88/245 (35%), Gaps = 11/245 (4%)

Query: 1105 TPRSNKKERNNSLFDDSISTSNIVNSPNSRSKSILNNSVEASEILSPTKSLNESMNKTQN 1164
            TP  +      S   DS + S      +S + S  +   ++S   +P+   + S + T +
Sbjct: 117  TPADSSAHSTPSAPADSSAHSTPSTPADSSAHSTPSTPADSSAHSTPSTPADSSAHSTPS 176

Query: 1165 ESFNTTQNDSILSTRRVLNDSASKRMPRKSLNNNENKITISALPKEDQS--PVQITRSPY 1222
                T  ++   ST     DS++   P    +++ +    +       S        S +
Sbjct: 177  ----TPADNGAHSTPSAPADSSAHSTPSTPADSSAHSTPSTPADSSAHSTPSTPADSSAH 232

Query: 1223 KVLSPAIEAPISSRVSSPRDTNFTPTKKSSIDDSLLNTPSPM--KKASEMPASPKISPMK 1280
               S   +    S  S+P D++   T  +  D+   +TPS      A   P +P  +   
Sbjct: 233  STPSTPADNGAHSTPSTPGDSSAHSTPSTPADNGAHSTPSAPGDNGAHSTPLTPGDNGAH 292

Query: 1281 SLQKNKNPPKEENVTSTILTPTKNGGMSPTRLEIISQTRGSPVAQALSTALSTSTKEKTK 1340
            S     + P +    ST LTP  NG  S       +    +P A A + A ST +     
Sbjct: 293  S---TPSAPGDNGAHSTPLTPGDNGAHSTPSTPGDNGAHSTPSAPADNGAHSTPSTPAGH 349

Query: 1341 KTKGS 1345
               G+
Sbjct: 350  GANGT 354



>EAY10367.1 on XP_802771   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 341

 Score = 33.5 bits (75), Expect = 0.068,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 59/157 (37%), Gaps = 11/157 (7%)

Query: 1235 SRVSSPRDTNFTPTKKSSIDDSLLNTPSPMKKASEMPASPKISPMKSLQKNKNPPKEENV 1294
            S  S+P D     T  +  D S  +TPS    +S   ++P            + P +   
Sbjct: 160  STPSTPGDNGAHSTPSTPADSSAHSTPSTPADSSAH-STPSTPADNGAHSTPSTPGDNGA 218

Query: 1295 TSTILTPTKNGGMSPTRLEIISQTRGSPVAQALSTALSTSTKEKTKKTKGSSSSVSTNNS 1354
             ST  TP  NG  S       +    +P   A S+A ST           S+ + S+ +S
Sbjct: 219  HSTPSTPADNGAHSTPSTPGDNGAHSTPSTPADSSAHSTP----------STPADSSAHS 268

Query: 1355 TTSSTRVTEKAKKSSLTTSTNSSTTTKAKARTSKNST 1391
            T S+   +      S+   +++ +T  A A    N T
Sbjct: 269  TPSTPADSSAHSTPSIPADSSAHSTPSAPADNGANGT 305




 Score = 29.6 bits (65), Expect = 1.2,   Method: Composition-based stats.
 Identities = 33/148 (22%), Positives = 62/148 (41%), Gaps = 7/148 (4%)

Query: 1248 TKKSSIDDSLLNTPSPM--KKASEMPASPKISPMKSLQKNKNPPKEENVTSTILTPTKNG 1305
            T  +  D+   +TPS      A   P++P  S   S     + P + +  ST  TP  NG
Sbjct: 149  TPSTPADNGAHSTPSTPGDNGAHSTPSTPADS---SAHSTPSTPADSSAHSTPSTPADNG 205

Query: 1306 GMSPTRLEIISQTRGSPVAQALSTALSTSTKEKTKKTKGSSSSVSTNNSTTSSTRVTEKA 1365
              S       +    +P   A + A ST +         + S+ + +++ ++ +   + +
Sbjct: 206  AHSTPSTPGDNGAHSTPSTPADNGAHSTPSTPGDNGAHSTPSTPADSSAHSTPSTPADSS 265

Query: 1366 KKSSLTTSTNSS--TTTKAKARTSKNST 1391
              S+ +T  +SS  +T    A +S +ST
Sbjct: 266  AHSTPSTPADSSAHSTPSIPADSSAHST 293



>EAY10367.1 on XP_966305  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3954

 Score = 31.6 bits (70), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 41/92 (44%), Gaps = 8/92 (8%)

Query: 1248 TKKSSIDDSLLNTPSPMKKASEMPASPK-ISPMKSLQKNKNPPKEENVTSTILTPTKNGG 1306
            T  S +  SL   P  +K   + P  PK    +K L +NK+  K    T    T  KNG 
Sbjct: 1665 THNSIMPQSLDKEPKEVKGRCKCPDPPKPCDIVKDLFENKDDNK---FTEACSTKYKNGK 1721

Query: 1307 MSPTRLEIISQ----TRGSPVAQALSTALSTS 1334
               T+ + I+     TR SP A   S+ LSTS
Sbjct: 1722 EKYTQWKCINDSSNTTRSSPPAPVASSTLSTS 1753



>EAY10367.1 on XP_806228   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1204

 Score = 31.6 bits (70), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 59/250 (23%), Positives = 106/250 (42%), Gaps = 20/250 (8%)

Query: 1132 NSRSKSILNNSVEASEILSPTKSLNESMNKTQNESFNTTQNDSILSTRRVLNDSASKRMP 1191
            +S + S  +  V++S   +P+  ++ S + T +    T  + S   T     DS++   P
Sbjct: 934  DSSAHSTPSTPVDSSAHGTPSTPVDSSAHGTPS----TPVDSSAHGTPSTPVDSSAHSTP 989

Query: 1192 RKSLNNNENKITISALPKEDQSPVQITRSPYKVLSPAIEAPISSRVSSPRDTNFTPTKKS 1251
               ++++ +            +PV    S +   S  +++   S  S+P D++   T  +
Sbjct: 990  STPVDSSAHGTP--------STPVD--SSAHGTPSTPVDSSAHSTPSTPVDSSAHGTPST 1039

Query: 1252 SIDDSLLNTPS-PM-KKASEMPASPKISPMKSLQKNKNPPKEENVTSTILTPTKNGGMSP 1309
             +D S  +TPS P+   A   P++P  S   S     + P + +  ST  TP  +     
Sbjct: 1040 PVDSSAHSTPSTPVDSSAHSTPSTPVDS---SAHSTPSTPVDSSAHSTPSTPVDSSAHGT 1096

Query: 1310 TRLEIISQTRGSPVAQALSTALST-STKEKTKKTKGSSSSVSTNNSTTSSTRVTEKAKKS 1368
                + S   G+P A   S+A ST ST   +      S+ V ++   T ST V   A  +
Sbjct: 1097 PSTPVDSSAHGTPSAPVDSSAHSTPSTPVDSSAHSTPSTPVDSSAHGTPSTPVDSSAHST 1156

Query: 1369 SLTTSTNSST 1378
              T + NS+T
Sbjct: 1157 PSTPAGNSAT 1166



>EAY10367.1 on XP_821088   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 910

 Score = 29.6 bits (65), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 12/26 (46%), Positives = 16/26 (61%)

Query: 37  IIYSLPLNKRKFTKDTEPDECGEPSI 62
           IIYS      K +K+T  D CG+PS+
Sbjct: 292 IIYSKDTKSWKLSKETSADGCGDPSV 317



>EAY10367.1 on XP_810753   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 955

 Score = 29.3 bits (64), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 14/38 (36%), Positives = 20/38 (52%)

Query: 37  IIYSLPLNKRKFTKDTEPDECGEPSISKDAATKSLSLL 74
           IIYSL  N  K +K    D C +PS+ +    K L ++
Sbjct: 337 IIYSLNNNNWKLSKGMSDDGCSDPSVVEWGRDKKLMIM 374



>EAY10367.1 on XP_821548   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 958

 Score = 29.3 bits (64), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 14/38 (36%), Positives = 20/38 (52%)

Query: 37  IIYSLPLNKRKFTKDTEPDECGEPSISKDAATKSLSLL 74
           IIYSL  N  K +K    D C +PS+ +    K L ++
Sbjct: 340 IIYSLNNNNWKLSKGMSDDGCSDPSVVEWGRDKKLMIM 377



>EAY10367.1 on XP_844699  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 341

 Score = 29.3 bits (64), Expect = 1.8,   Method: Composition-based stats.
 Identities = 25/101 (24%), Positives = 40/101 (39%), Gaps = 15/101 (14%)

Query: 1310 TRLEIISQTRGSPVAQALSTALSTSTKEKTKKTKGSSSSVSTNNSTTSSTRVTEKAKKSS 1369
            ++LE +     +   +A S A    TKE +KK K              S R T    +  
Sbjct: 239  SKLETLRSEVATVEERAYSNA-HPQTKETSKKEK--------------SDRSTPSKTEGP 283

Query: 1370 LTTSTNSSTTTKAKARTSKNSTNDTTTTTKTAKQLAEENRA 1410
             TT+    +T   +    +N+T  T+  T   K+  EE R+
Sbjct: 284  HTTARTDGSTQNERPNAQRNTTATTSDMTNNTKRPPEEQRS 324



>EAY10367.1 on XP_810286   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 846

 Score = 29.3 bits (64), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 19/92 (20%)

Query: 26  GAQVVEEDNNPIIYSLPLNKRKFTKDTEPDECG-----EPSISKDAATKSLSLLIGNDFN 80
           GA+ ++ DNNP++  L  NK K  +      CG     EPS + +A T  + +L+    N
Sbjct: 501 GAKWID-DNNPVLLGLSYNKEKKWQVL----CGGGTPKEPSSTSEATTHHVVILL---RN 552

Query: 81  LLKNRAFKNKIKGLNALQNILGKECDLDSNAD 112
             +  A+   + G   L +    ECDL +  D
Sbjct: 553 GTQGSAY---VDGRRVLGDA---ECDLKNTED 578



>EAY10367.1 on XP_807798   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 875

 Score = 28.9 bits (63), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 9/72 (12%)

Query: 37  IIYSLPLNKRKFTKDTEPDECGEPSISKDAATKSLSLLIGNDFNLLKNRAFKNKIKG--- 93
           IIYS  +     +K    D CG+PS+ K    K + +   +D    + R +++  KG   
Sbjct: 288 IIYSSDIASGNLSKGMSADGCGDPSVVKWEKDKLMMMTACDDG---RRRVYESGDKGESW 344

Query: 94  ---LNALQNILG 102
              L  L  + G
Sbjct: 345 TEALGTLSRVWG 356



>EAY10367.1 on XP_806427   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 886

 Score = 28.5 bits (62), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 9/72 (12%)

Query: 37  IIYSLPLNKRKFTKDTEPDECGEPSISKDAATKSLSLLIGNDFNLLKNRAFKNKIKG--- 93
           IIYSL  N  K  K+   D C +PS+ +    K + +   +D    + R +++  KG   
Sbjct: 276 IIYSLSNNNWKLLKEISDDGCSDPSVVEWRDGKLMMMTACDDG---RRRVYESGDKGESW 332

Query: 94  ---LNALQNILG 102
              L  L  + G
Sbjct: 333 TEALGTLSRVWG 344



>EAY10367.1 on XP_818193   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 838

 Score = 27.7 bits (60), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 2/62 (3%)

Query: 292 APTEKFYRTSDNKALEELAKLNEQLNKEKAAEDAAKAKISNVITPEVLAAAEAAQKFKDF 351
           A +   YR+ DNK  EEL  L E+  K+   ++ +   +S ++T ++    +    +K+ 
Sbjct: 483 AASSLLYRSGDNKKEEELIALYEK--KKGDGKEPSYGMVSVLLTAQLKRVKKVLTTWKEV 540

Query: 352 DE 353
           DE
Sbjct: 541 DE 542



>EAY10367.1 on XP_001350954  RESA  (Others)  [Plasmodium falciparum]
          Length = 654

 Score = 27.7 bits (60), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 1/78 (1%)

Query: 1328 STALSTSTKEKTKKTKGSSSSVSTNNSTTSSTRVTEKAKKSSLTTSTNSSTTTKAKARTS 1387
            + A +   K+KT+  K   +  STN +T       E A K +   ++ S   TK +A TS
Sbjct: 502  TNAATPGAKDKTQGGKTDKTGASTNAATNKGQCAAEGATKGATKEASTSKEATK-EASTS 560

Query: 1388 KNSTNDTTTTTKTAKQLA 1405
            K +T + +T+ +  K+ +
Sbjct: 561  KEATKEASTSKEATKEAS 578



>EAY10367.1 on XP_807431   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 940

 Score = 27.3 bits (59), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 5/160 (3%)

Query: 1238 SSPRDTNFTPTKKSSIDDSLLNTPS-PMKKASEMPASPKISPMKSLQKNKNPPKEENVTS 1296
            S+P D++   T  +++D S   TPS P+  ++    +P  +   S     + P + +  S
Sbjct: 726  STPVDSSAHGTPSTTVDSSAHGTPSTPVDSSAH--GTPSTTVDSSAHATPSTPVDSSAHS 783

Query: 1297 TILTPTKNGGMSPTRLEIISQTRGSPVAQALSTALSTSTKEKTKKTKGS-SSSVSTNNST 1355
            T  TP  +         + S   G+P     S+A  T +        G+ S+ V ++   
Sbjct: 784  TPSTPVDSSAHGTPSTPVDSSAHGTPSTPVDSSAHGTPSTPVDSSAHGTPSTPVDSSAHG 843

Query: 1356 TSSTRVTEKAK-KSSLTTSTNSSTTTKAKARTSKNSTNDT 1394
            T ST V   A  K S    +++  T      +S +ST  T
Sbjct: 844  TPSTPVDSSAHGKPSTPVDSSAHGTPSTPVDSSAHSTPST 883




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10378.1 LIM domain containing protein [Trichomonas
vaginalis G3]
         (351 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAK31238  variable surface protein 21f  (Establishment)  [Giardi...    28   0.26 
AAK31241  variable surface protein 42c  (Establishment)  [Giardi...    28   0.28 
XP_001609163  variant erythrocyte surface antigen-1, alpha subun...    27   1.6  
AAK31226  variable surface protein 7c  (Establishment)  [Giardia...    26   1.9  
AAK31239  variable surface protein 42a  (Establishment)  [Giardi...    26   2.2  
AAK31240  variable surface protein 42b  (Establishment)  [Giardi...    25   2.8  
XP_001609449  variant erythrocyte surface antigen-1, beta subuni...    26   3.5  
XP_001349437  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   4.2  
AAK31250  variable surface protein IVh  (Establishment)  [Giardi...    25   5.3  
AAK31235  variable surface protein 21c  (Establishment)  [Giardi...    24   9.2  

>EAY10378.1 on AAK31238  variable surface protein 21f  (Establishment)  [Giardia
           duodenalis]
          Length = 128

 Score = 28.5 bits (62), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 9/73 (12%)

Query: 270 RCRKCSELYIKQCRGCTNTKDEPTIIACGAKWHRDCFKCMKCSKNLADSKYVNMNGYPCC 329
            C  C+E   K C+  T+T  E     C A ++    KC+KCS+N AD    N+ G P C
Sbjct: 19  NCPTCAEGCAK-CQSSTSTCTE-----CLAGYYLSNSKCVKCSENSADG---NIKGVPNC 69

Query: 330 ESCYRKMLDNNEI 342
            SC     ++  +
Sbjct: 70  VSCAPPTGNSGPV 82



>EAY10378.1 on AAK31241  variable surface protein 42c  (Establishment)  [Giardia
           duodenalis]
          Length = 128

 Score = 28.5 bits (62), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 9/63 (14%)

Query: 270 RCRKCSELYIKQCRGCTNTKDEPTIIACGAKWHRDCFKCMKCSKNLADSKYVNMNGYPCC 329
            C  C+E   K C+  T+T  E     C A ++    KC+KCS+N AD    N+ G P C
Sbjct: 19  NCPTCAEGCAK-CQSSTSTCTE-----CLAGYYLSNSKCVKCSENSADG---NIKGVPNC 69

Query: 330 ESC 332
            SC
Sbjct: 70  VSC 72



>EAY10378.1 on XP_001609163  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1360

 Score = 27.3 bits (59), Expect = 1.6,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 34/93 (36%), Gaps = 9/93 (9%)

Query: 214 KCLGLIQKKICAGCNKTIE-GECCQVEGIKYHPEEFKCSDCGTPLQNGVAVLDHGKLRCR 272
           KC G    + C G   + E GE    E ++    E KC DCG    N     + G    R
Sbjct: 123 KCWGSGDSEKCKGGGSSNEHGEKTGCEYLQDVKHENKCGDCGCMKWNVTNADNEGTPLGR 182

Query: 273 KCSELYIKQCRGCTNTKDEPTIIACGAKWHRDC 305
           KC+         C+++ D     +C       C
Sbjct: 183 KCTR--------CSDSGDSAHRCSCNTGGSSTC 207



>EAY10378.1 on AAK31226  variable surface protein 7c  (Establishment)  [Giardia
           duodenalis]
          Length = 163

 Score = 26.2 bits (56), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 18/63 (28%), Positives = 21/63 (33%), Gaps = 6/63 (9%)

Query: 270 RCRKCSELYIKQCRGCTNTKDEPTIIACGAKWHRDCFKCMKCSKNLADSKYVNMNGYPCC 329
           +C  C+  Y     GC NTK  P    C       C  C          +Y N N   C 
Sbjct: 4   KCTACTGNYALLSSGCYNTKALPGSAVCTTATSGSCTTCAN------GQQYTNNNCPACA 57

Query: 330 ESC 332
           E C
Sbjct: 58  EGC 60



>EAY10378.1 on AAK31239  variable surface protein 42a  (Establishment)  [Giardia
           duodenalis]
          Length = 173

 Score = 26.2 bits (56), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 13/40 (32%), Positives = 19/40 (47%)

Query: 284 GCTNTKDEPTIIACGAKWHRDCFKCMKCSKNLADSKYVNM 323
           GC+   D  T   C A ++     C+KC KN  D+K   +
Sbjct: 72  GCSKCSDANTCTECLAGYYLSGTTCVKCDKNSTDNKITGV 111



>EAY10378.1 on AAK31240  variable surface protein 42b  (Establishment)  [Giardia
           duodenalis]
          Length = 127

 Score = 25.4 bits (54), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 9/73 (12%)

Query: 266 HGKLRCRKCSELYIKQCRGCTNTKDEPTIIACGAKWHRDCFKCMKCSKNLADSKYVNMNG 325
           +    C  C+E   K C+  T+T  E     C A +     KC+KCS+N AD    N+ G
Sbjct: 15  YASGNCPTCAEGCAK-CQSSTSTCTE-----CLAGYCLSNSKCVKCSENSADG---NIKG 65

Query: 326 YPCCESCYRKMLD 338
            P C SC      
Sbjct: 66  VPNCVSCVAPTTS 78



>EAY10378.1 on XP_001609449  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 776

 Score = 26.2 bits (56), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 12/37 (32%), Positives = 15/37 (40%)

Query: 304 DCFKCMKCSKNLADSKYVNMNGYPCCESCYRKMLDNN 340
           D    M C K +  S     N YP  E    K +D+N
Sbjct: 690 DALGSMACKKTIGKSSDSETNPYPSIEDHMNKSVDSN 726



>EAY10378.1 on XP_001349437  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2231

 Score = 26.2 bits (56), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 3    EEILQKLFAQKANVKHGKASMDLTHYKDIPSGE 35
            EE+L KL  +K   K    +  LTH  +IPSGE
Sbjct: 2081 EELLDKL--KKEWNKENNTNSSLTHTSNIPSGE 2111



>EAY10378.1 on AAK31250  variable surface protein IVh  (Establishment)  [Giardia
           duodenalis]
          Length = 161

 Score = 25.0 bits (53), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 5/54 (9%)

Query: 289 KDEPTIIACGAKWHRDCFKCMKCSKNLADSKYVNMNGYPCCESCYRKMLDNNEI 342
               T  AC A ++    KC+KC K+  DS   N+ G P C SC     +   +
Sbjct: 67  SSTSTCTACLAGYYLSGTKCVKCDKD--DS---NIKGVPNCVSCAAPASNTGTV 115



>EAY10378.1 on AAK31235  variable surface protein 21c  (Establishment)  [Giardia
           duodenalis]
          Length = 129

 Score = 23.9 bits (50), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 12/40 (30%), Positives = 18/40 (45%)

Query: 284 GCTNTKDEPTIIACGAKWHRDCFKCMKCSKNLADSKYVNM 323
           GC+      T   C A ++     C+KC KN  D+K   +
Sbjct: 28  GCSKCSGSNTCTECLAGYYLSGTTCVKCDKNSTDNKITGV 67




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10380.1 hypothetical protein TVAG_109640 [Trichomonas
vaginalis G3]
         (215 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001610497  variant erythrocyte surface antigen-1, alpha subun...    27   1.2  
XP_001609040  variant erythrocyte surface antigen-1, alpha subun...    25   3.1  
XP_808179   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   6.3  

>EAY10380.1 on XP_001610497  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1315

 Score = 26.6 bits (57), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 2/35 (5%)

Query: 7   KELLDMHEKRLHEMLEIVEKGDWKLSKEETNIKFY 41
           K++LD  +KRL E+L+  + GD   +  ET +KFY
Sbjct: 480 KDMLDYAKKRLKEVLK--KPGDNDSTNGETQLKFY 512



>EAY10380.1 on XP_001609040  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1335

 Score = 25.4 bits (54), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 12/35 (34%), Positives = 21/35 (60%)

Query: 7   KELLDMHEKRLHEMLEIVEKGDWKLSKEETNIKFY 41
           KE+LD  ++RL ++L+         S +ET +KF+
Sbjct: 466 KEMLDYAKRRLEKVLKKPGDAGSSASNQETQLKFH 500



>EAY10380.1 on XP_808179   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 942

 Score = 24.6 bits (52), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 1   MGEEIPKELLDMHEKRLHEMLEIVEKG 27
            GEE PKEL    E+  H ++ ++  G
Sbjct: 623 CGEEAPKELSSTSEQTTHHVVILLRNG 649




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10381.1 hypothetical protein TVAG_109650 [Trichomonas
vaginalis G3]
         (465 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 37   0.002
XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]                 37   0.004
XP_820186   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           32   0.067
XP_954179  TashAT2  (Establishment)  [Theileria annulata]              31   0.15 
XP_808957   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   4.1  
XP_820135   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   4.7  
XP_813237   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   5.8  
XP_001351563  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   7.5  
XP_813188   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   8.0  
XP_954177  TashAT1  (Establishment)  [Theileria annulata]              25   9.6  

>EAY10381.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 37.4 bits (85), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 79/135 (58%), Gaps = 17/135 (12%)

Query: 132  AMKKFEAEKTAPAKEEKKEEKKEEKKEERQHSPKKEKPKEEKKEEPPKEEKPRK---ERP 188
            A+K+ E E+    +E K++E++  ++E+++   K+E+ K +++E   KEE  ++   ER 
Sbjct: 2738 ALKRQEQERLQKEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERL 2797

Query: 189  KKEEEKPKEEA-----PKAEELPKEE--KKERRERPKKEEKPE-------EKKEEPPKEE 234
            +KEEE  ++E       K E+L KEE  K++ +ER +KEE  +       +K+EE  ++E
Sbjct: 2798 QKEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQE 2857

Query: 235  KPRKEKREKPKPEPE 249
            + R E+++    E E
Sbjct: 2858 QERLERKKIELAERE 2872




 Score = 34.7 bits (78), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 67/113 (59%), Gaps = 5/113 (4%)

Query: 146  EEKKEEKKEEKKEE---RQHSPKKEKPKEEKKEEPPKEEKPRKERPKKEEEKPKEEAPKA 202
            E K++E++  +KEE   RQ   + +K +E K++E  + E+ ++E+ +KEEE  ++E  + 
Sbjct: 2774 ELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQERLEREKQEQLQKEEELKRQEQERL 2833

Query: 203  --EELPKEEKKERRERPKKEEKPEEKKEEPPKEEKPRKEKREKPKPEPETPAV 253
              EE  K +++ER ++ ++ ++ E+++ E  K E   +E+  K K E +   +
Sbjct: 2834 QKEEALKRQEQERLQKEEELKRQEQERLERKKIELAEREQHIKSKLESDMVKI 2886



>EAY10381.1 on XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]
          Length = 2112

 Score = 36.6 bits (83), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 2/63 (3%)

Query: 198 EAPKAEELPKE-EKKERRERPKKEEKPEEKKEEPPKEEKPRKEKREKPKPEPETPAVPAI 256
           E PK EE P+  EK    E P   EKP   +E P   EKP  E+   P  +PE    P I
Sbjct: 498 ELPKPEENPEPVEKPNPEENPNPVEKP-TPEENPNPVEKPTPEENPNPVEKPEPEKNPCI 556

Query: 257 QVD 259
            ++
Sbjct: 557 NME 559




 Score = 34.3 bits (77), Expect = 0.016,   Method: Composition-based stats.
 Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 6/61 (9%)

Query: 167 EKPKEEKKEEPPKEEKPRKERPKKEEEKPKEEAPKAEELPKEEKKERRERPKKEEKPEEK 226
           E PK E+  EP ++  P +E P   E+   EE P   E P  E     E P   EKPE +
Sbjct: 498 ELPKPEENPEPVEKPNP-EENPNPVEKPTPEENPNPVEKPTPE-----ENPNPVEKPEPE 551

Query: 227 K 227
           K
Sbjct: 552 K 552




 Score = 34.3 bits (77), Expect = 0.018,   Method: Composition-based stats.
 Identities = 24/56 (42%), Positives = 25/56 (44%), Gaps = 2/56 (3%)

Query: 186 ERPKKEEEKPKEEAPKAEELPKE-EKKERRERPKKEEKPEEKKEEPPKEEKPRKEK 240
           E PK EE     E P  EE P   EK    E P   EKP   +E P   EKP  EK
Sbjct: 498 ELPKPEENPEPVEKPNPEENPNPVEKPTPEENPNPVEKPT-PEENPNPVEKPEPEK 552




 Score = 31.2 bits (69), Expect = 0.15,   Method: Composition-based stats.
 Identities = 23/63 (36%), Positives = 27/63 (42%), Gaps = 7/63 (11%)

Query: 175 EEPPKEEKPRK-ERPKKEEEKPKEEAPKAEELPKEEKKERRERPKKEEKPEEKKEEPPKE 233
           E P  EE P   E+P  EE     E P  EE P        E+P  EE P    E+P  E
Sbjct: 498 ELPKPEENPEPVEKPNPEENPNPVEKPTPEENPNPV-----EKPTPEENP-NPVEKPEPE 551

Query: 234 EKP 236
           + P
Sbjct: 552 KNP 554




 Score = 30.0 bits (66), Expect = 0.30,   Method: Composition-based stats.
 Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 16/67 (23%)

Query: 204 ELPKEEKKERRERPKKEEKPEEKKEEPPKEEKPRKEKREKPKPEPETPAVPAIQVDIEDD 263
           ELPK E     E P+  EKP   +E P   EKP  E+   P  +P TP         E++
Sbjct: 498 ELPKPE-----ENPEPVEKPN-PEENPNPVEKPTPEENPNPVEKP-TP---------EEN 541

Query: 264 SNPAARP 270
            NP  +P
Sbjct: 542 PNPVEKP 548




 Score = 28.9 bits (63), Expect = 0.70,   Method: Composition-based stats.
 Identities = 44/160 (27%), Positives = 66/160 (41%), Gaps = 28/160 (17%)

Query: 215 ERPKKEEKPEEKKEEPPKEEKPRKEKREKPKPEPETPAVPAIQVDIEDDSNPAARPMTAR 274
           E PK EE PE   E+P  EE P     EKP PE              ++ NP  +P T  
Sbjct: 498 ELPKPEENPE-PVEKPNPEENP--NPVEKPTPE--------------ENPNPVEKP-TPE 539

Query: 275 KAPPKVKDDVPVITESKVTTIIKEEDVDDDVDDV--FVEESAAGQPATSGQE----NGQL 328
           + P  V+   P     K   I  E+    D  D+   ++ESA+        E    + ++
Sbjct: 540 ENPNPVEKPEP----EKNPCINMEDCYCKDFYDITLVLDESASISDLIWRNEVIPFSLEI 595

Query: 329 VQKILEEFQNVNTKQGAGSADAYDADRFKQSIEFAKGLLQ 368
           +++I   ++NV+      S    D  RF  +  + KG LQ
Sbjct: 596 IKRINISYKNVHMGVLLFSEYTRDIVRFYDNARYEKGTLQ 635




 Score = 27.3 bits (59), Expect = 2.4,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 3/54 (5%)

Query: 156 KKEERQHSPKKEKPKEEKK--EEPPKEEKP-RKERPKKEEEKPKEEAPKAEELP 206
           K EE     +K  P+E     E+P  EE P   E+P  EE     E P+ E+ P
Sbjct: 501 KPEENPEPVEKPNPEENPNPVEKPTPEENPNPVEKPTPEENPNPVEKPEPEKNP 554




 Score = 26.6 bits (57), Expect = 3.6,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 4/56 (7%)

Query: 143 PAKEEKKEEKKEEKKEERQHSPKKEKPKEEKKEEPPKEEKPRKERPKKEEEKPKEE 198
           P  EE  E  ++   EE  +  +K  P+E     P   EKP  E      EKP+ E
Sbjct: 500 PKPEENPEPVEKPNPEENPNPVEKPTPEEN----PNPVEKPTPEENPNPVEKPEPE 551



>EAY10381.1 on XP_820186   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1133

 Score = 32.3 bits (72), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 13/109 (11%)

Query: 143 PAKEEKKEEKKEEKKEERQHSPKKEKPKEEKKEEP----PKEEKPRKERPKKEEEKPKEE 198
           PA+ +  E K  E K        + KP E K  EP    PK  +P+   PK  E KP E 
Sbjct: 824 PAEPKSAEPKPAESKS------AEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAE- 876

Query: 199 APKAEELPKEEKKERRERPKKEEKPEEKKEEP-PKEEKPRKEKREKPKP 246
            PK+ E    E K    +P + +  E K  EP   E KP + K  +PKP
Sbjct: 877 -PKSAEPKPAESKSAGPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKP 924




 Score = 31.2 bits (69), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 51/113 (45%), Gaps = 11/113 (9%)

Query: 143 PAKEEKKEEKKEEKK--EERQHSPKKE--KPKEEKKEEP----PKEEKPRKERPKKEEEK 194
           PA+ +  E K  E K  E +   PK    KP E K  EP    PK  +P+   PK  E K
Sbjct: 804 PAEPKSAEPKPAESKSAEPKPAEPKSAEPKPAESKSAEPKPAEPKSAEPKPAEPKSAEPK 863

Query: 195 PKEEAPKAEELPKEEKKERRERPKKEEKPEEKKEEP-PKEEKPRKEKREKPKP 246
           P E  PK+ E    E K    +P + +    K  EP   E KP + K  +PKP
Sbjct: 864 PAE--PKSAEPKPAEPKSAEPKPAESKSAGPKPAEPKSAEPKPAEPKSAEPKP 914




 Score = 30.4 bits (67), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 50/111 (45%), Gaps = 7/111 (6%)

Query: 143 PAKEEKKEEKKEEKK--EERQHSPKKEKPK-EEKKEEPPKEEKPRKERPKKEEEK---PK 196
           PA+ +  E K  E K  E +   PK  +PK  E K   PK  +P+   PK  E K   PK
Sbjct: 784 PAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAESKSAEPKPAEPKSAEPKPAESKSAEPK 843

Query: 197 EEAPKAEELPKEEKKERRERPKKEEKPEEKKEEP-PKEEKPRKEKREKPKP 246
              PK+ E    E K    +P + +  E K  EP   E KP + K   PKP
Sbjct: 844 PAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAESKSAGPKP 894




 Score = 30.0 bits (66), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 39/84 (46%), Gaps = 7/84 (8%)

Query: 168 KPKEEKKEEP----PKEEKPRKERPKKEEEKPKEEAPKAEELPKEEKKERRERPKKEEKP 223
           KP E K  EP    PK  +P+   PK  E KP E  P + E    E K    +P + +  
Sbjct: 903 KPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAE--PNSAEPKPAEPKSAEPKPAEPKSA 960

Query: 224 EEKKEEP-PKEEKPRKEKREKPKP 246
           E K  EP   E KP + K  +PKP
Sbjct: 961 EPKPAEPKSAEPKPAEPKSAEPKP 984




 Score = 30.0 bits (66), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 50/111 (45%), Gaps = 7/111 (6%)

Query: 143 PAKEEKKEEKKEEKK--EERQHSPKKEKPK-EEKKEEPPKEEKPRKERPKKEEEK---PK 196
           PA+ +  E K  E K  E +   PK  +PK  E K   PK  +P+   PK  E K   PK
Sbjct: 854 PAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAESKSAGPKPAEPKSAEPKPAEPKSAEPK 913

Query: 197 EEAPKAEELPKEEKKERRERPKKEEKPEEKKEEP-PKEEKPRKEKREKPKP 246
              PK+ E    E K    +P +    E K  EP   E KP + K  +PKP
Sbjct: 914 PAEPKSAEPKPAEPKSAEPKPAEPNSAEPKPAEPKSAEPKPAEPKSAEPKP 964




 Score = 28.5 bits (62), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 52/121 (42%), Gaps = 17/121 (14%)

Query: 143 PAKEEKKEEKKEEKK--EERQHSPKKEKPK-EEKKEEPPKEEKPRKERPKKEEEK---PK 196
           PA+ +  E K  E K  E +   PK  +PK  E K   PK  +P+   PK  E K   PK
Sbjct: 834 PAESKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAESKSAGPK 893

Query: 197 EEAPKAEELPKEEKKERRERP----KKEEKPEEKKEEPPK-------EEKPRKEKREKPK 245
              PK+ E    E K    +P      E KP E K   PK       E KP + K  +PK
Sbjct: 894 PAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPNSAEPKPAEPKSAEPK 953

Query: 246 P 246
           P
Sbjct: 954 P 954




 Score = 27.3 bits (59), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 42/96 (43%), Gaps = 10/96 (10%)

Query: 143  PAKEEKKEEKKEEKK--EERQHSPKKE--KPKEEKKEEP----PKEEKPRKERPKKEEEK 194
            PA+    E K  E K  E +   PK    KP E K  EP    PK  +P+   PK  E K
Sbjct: 934  PAEPNSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPK 993

Query: 195  PKEEAPKAEELPKEEKKERRERPKKEEKPEEKKEEP 230
            P E  PK+ E    E K    +P + +  E K  EP
Sbjct: 994  PAE--PKSAEPKPAEPKSAEPKPAEPKSAEPKPAEP 1027




 Score = 26.9 bits (58), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 41/102 (40%), Gaps = 23/102 (22%)

Query: 168 KPKEEKKEEP----PKEEKPRKERPKKEEEKPKEEA--------PKAEELPKEEKKERRE 215
           KP E K  EP    PK  +P+   PK  E KP E          PK+ E    E K    
Sbjct: 783 KPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAESKSAEPKPAEPKSAEPKPAESKSAEP 842

Query: 216 RP----KKEEKPEEKKEEPPK-------EEKPRKEKREKPKP 246
           +P      E KP E K   PK       E KP + K  +PKP
Sbjct: 843 KPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKP 884



>EAY10381.1 on XP_954179  TashAT2  (Establishment)  [Theileria annulata]
          Length = 1161

 Score = 31.2 bits (69), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 49/87 (56%), Gaps = 3/87 (3%)

Query: 165 KKEKPKEEKKEEP--PKEEKPRKERPKKEEEKPKEEAPKAEELPKEEKKERRERPKKEEK 222
           K EKP E  K  P  P++ KP  E+PK++  +P++  P+ E+  ++  + R+++P+ E  
Sbjct: 425 KHEKP-EVPKRRPGRPRKHKPEPEQPKRKRGRPRKHKPEPEQPKRKRGRPRKQKPEPESD 483

Query: 223 PEEKKEEPPKEEKPRKEKREKPKPEPE 249
             E+  +P  +E+  ++  +   P PE
Sbjct: 484 HSEESTQPHPQEQETEDSIKALGPSPE 510



>EAY10381.1 on XP_808957   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1446

 Score = 26.6 bits (57), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 48/106 (45%), Gaps = 7/106 (6%)

Query: 146 EEKKEEKKEEKKEERQHSPKKEKPKEEKKEEP----PKEEKPRKERPKKEEEKPKEEAPK 201
           E K  E K  + E  +    + KP E K  EP    PK  +P+   PK  E KP E  PK
Sbjct: 861 EPKPAEPKSAEPEPAEPKSAEPKPAEPKSAEPEPAEPKSAEPKPAEPKSAEPKPAE--PK 918

Query: 202 AEELPKEEKKERRERPKKEEKPEEKKEEP-PKEEKPRKEKREKPKP 246
           + E    E K    +P + +  E K  EP   E KP + K  +PKP
Sbjct: 919 SAEPKPAEPKSAGPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKP 964




 Score = 26.6 bits (57), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 48/108 (44%), Gaps = 8/108 (7%)

Query: 144 AKEEKKEEKKEEKKEERQHSPKKEKPKEEKKEEP----PKEEKPRKERPKKEEEKPKEEA 199
           A+ E  E K  E K     S  + KP E K  EP    PK   P+   PK  E KP E  
Sbjct: 890 AEPEPAEPKSAEPKPAEPKS-AEPKPAEPKSAEPKPAEPKSAGPKPAEPKSAEPKPAE-- 946

Query: 200 PKAEELPKEEKKERRERPKKEEKPEEKKEEP-PKEEKPRKEKREKPKP 246
           PK+ E    E K    +P + +  E K  EP   E KP + K  +PKP
Sbjct: 947 PKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKP 994




 Score = 26.2 bits (56), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 40/84 (47%), Gaps = 7/84 (8%)

Query: 168  KPKEEKKEEP----PKEEKPRKERPKKEEEKPKEEAPKAEELPKEEKKERRERPKKEEKP 223
            KP E K  EP    PK  +P+   PK  E KP E  PK+ E    E K    +P + +  
Sbjct: 933  KPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAE--PKSAEPKPAEPKSAEPKPAEPKSA 990

Query: 224  EEKKEEP-PKEEKPRKEKREKPKP 246
            E K  EP   E KP + K  +PKP
Sbjct: 991  EPKPAEPKSAEPKPAEPKSAEPKP 1014




 Score = 25.4 bits (54), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 47/108 (43%), Gaps = 8/108 (7%)

Query: 144 AKEEKKEEKKEEKKEERQHSPKKEKPKEEKKEEP----PKEEKPRKERPKKEEEKPKEEA 199
           A+ E  E K  E K     S  + KP E K  EP    PK  +P    PK  E KP E  
Sbjct: 830 AEPEPAEPKSAEPKPAEPKS-AEPKPAEPKSAEPKPAEPKSAEPEPAEPKSAEPKPAE-- 886

Query: 200 PKAEELPKEEKKERRERPKKEEKPEEKKEEP-PKEEKPRKEKREKPKP 246
           PK+ E    E K    +P + +  E K  EP   E KP + K   PKP
Sbjct: 887 PKSAEPEPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAGPKP 934



>EAY10381.1 on XP_820135   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1519

 Score = 26.2 bits (56), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 50/111 (45%), Gaps = 12/111 (10%)

Query: 146 EEKKEEKKEEKKEERQHSPKKEKPKEEKKEEP----PKEEKPRKERPKKEEEKPKEEAPK 201
           E K  E K  + +  +  P + KP E K  EP    PK  +P+   PK  E KP E  PK
Sbjct: 757 EPKSAEPKPAEPKSAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKSAEPKPAE--PK 814

Query: 202 AEELPKEEKKERRERPKKEEKPEEKKEEP------PKEEKPRKEKREKPKP 246
           + E    E K    +P + +  E K  EP      P E KP + K  +PKP
Sbjct: 815 SAEPKPAEPKSAEPKPAEPKSAEPKPTEPKSAEPKPAEPKPAEPKSAEPKP 865




 Score = 26.2 bits (56), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 43/110 (39%), Positives = 50/110 (45%), Gaps = 15/110 (13%)

Query: 143 PAKEEKKEEKKEEKKEERQHSPKKEKPKEEKKEEP----PKEEKPRKERPKKEEEKPKEE 198
           PA+ +  E K  E K   Q S  + KP E K  EP    PK  +P+   PK  E KP E 
Sbjct: 720 PAEPKPAEPKSAEPKPAEQKS-AEPKPAEPKSAEPKPTEPKSAEPKPAEPKSAEPKPAEP 778

Query: 199 APKAEELPKEEKKERRERPKKEEKPEEKKEEPPK--EEKPRKEKREKPKP 246
            P AE  P E K         E KP E K   PK  E KP + K  +PKP
Sbjct: 779 KP-AEPKPAEPK-------SAEPKPAEPKPAEPKSAEPKPAEPKSAEPKP 820




 Score = 26.2 bits (56), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 54/113 (47%), Gaps = 11/113 (9%)

Query: 143 PAKEEKKEEKKEEKK--EERQHSPKKEKPK--EEKKEEP----PKEEKPRKERPKKEEEK 194
           PA+ +  E K  E K  E +   PK  +PK  E K  EP    PK  +P+   PK  E K
Sbjct: 875 PAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKSAEPKPAEPKSAEPKPAEPKSAEPK 934

Query: 195 PKEEAPKAEELPKEEKKERRERPKKEEKPEEKKEEP-PKEEKPRKEKREKPKP 246
           P E  PK+ E    E K    +P + +  E K  EP P E KP + K  +PKP
Sbjct: 935 PAE--PKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKPAEPKPAEPKSAEPKP 985



>EAY10381.1 on XP_813237   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1496

 Score = 26.2 bits (56), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 50/106 (47%), Gaps = 7/106 (6%)

Query: 146 EEKKEEKKEEKKEERQHSPKKEKPKEEKKEEP----PKEEKPRKERPKKEEEKPKEEAPK 201
           E K  E K  + +  +  P + KP E K  EP    PK  +P+   PK  E KP E  PK
Sbjct: 724 EPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAE--PK 781

Query: 202 AEELPKEEKKERRERPKKEEKPEEKKEEP-PKEEKPRKEKREKPKP 246
           + E    E K    +P + +  E K  EP P E KP + K  +PKP
Sbjct: 782 SAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKP 827




 Score = 25.4 bits (54), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 49/106 (46%), Gaps = 7/106 (6%)

Query: 146 EEKKEEKKEEKKEERQHSPKKEKPKEEKKEEP----PKEEKPRKERPKKEEEKPKEEAPK 201
           E K  E K  + +  +  P + KP E K  EP    PK  +P+   PK  E KP E  PK
Sbjct: 804 EPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAE--PK 861

Query: 202 AEELPKEEKKERRERPKKEEKPEEKKEEP-PKEEKPRKEKREKPKP 246
             E    E K    +P + +  E K  EP P E KP + K  +PKP
Sbjct: 862 PAEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPAEPKP 907




 Score = 25.4 bits (54), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 39/105 (37%), Positives = 48/105 (45%), Gaps = 10/105 (9%)

Query: 146 EEKKEEKKEEKKEERQHSPKKEKPKEEKKEEP----PKEEKPRKERPKKEEEKPKEEAPK 201
           E K  E K  + +  +  P + KP E K  EP    PK  +P+   PK  E KP E  P 
Sbjct: 794 EPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKP- 852

Query: 202 AEELPKEEKKERRERPKKEEKPEEKKEEPPKEEKPRKEKREKPKP 246
           AE  P E K    +    E KP E K   P E KP + K  +PKP
Sbjct: 853 AEPKPAEPKPAEPK--PAEPKPAEPK---PAEPKPAEPKSAEPKP 892




 Score = 25.4 bits (54), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 50/108 (46%), Gaps = 7/108 (6%)

Query: 144  AKEEKKEEKKEEKKEERQHSPKKEKPKEEKKEEP----PKEEKPRKERPKKEEEKPKEEA 199
            A E K  E K  + +  +  P + KP E K  EP    PK  +P+   PK  E KP E  
Sbjct: 1072 AAEPKPAEPKSAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPAEPKPVEPKPAE-- 1129

Query: 200  PKAEELPKEEKKERRERPKKEEKPEEKKEEP-PKEEKPRKEKREKPKP 246
            PK  E    E K    +P + +  E K  EP P E KP + K  +PKP
Sbjct: 1130 PKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPVEPKP 1177




 Score = 25.4 bits (54), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 49/106 (46%), Gaps = 7/106 (6%)

Query: 146  EEKKEEKKEEKKEERQHSPKKEKPKEEKKEEP----PKEEKPRKERPKKEEEKPKEEAPK 201
            E K  E K  + +  +  P + KP E K  EP    PK  +P+   PK  E KP E  PK
Sbjct: 954  EPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAE--PK 1011

Query: 202  AEELPKEEKKERRERPKKEEKPEEKKEEP-PKEEKPRKEKREKPKP 246
              E    E K    +P + +  E K  EP P E KP + K  +PKP
Sbjct: 1012 PAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKP 1057




 Score = 25.4 bits (54), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 49/106 (46%), Gaps = 7/106 (6%)

Query: 146  EEKKEEKKEEKKEERQHSPKKEKPKEEKKEEP----PKEEKPRKERPKKEEEKPKEEAPK 201
            E K  E K  + +  +  P + KP E K  EP    PK  +P+   PK  E KP E  PK
Sbjct: 959  EPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAE--PK 1016

Query: 202  AEELPKEEKKERRERPKKEEKPEEKKEEP-PKEEKPRKEKREKPKP 246
              E    E K    +P + +  E K  EP P E KP + K  +PKP
Sbjct: 1017 PAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKP 1062




 Score = 25.4 bits (54), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 53/114 (46%), Gaps = 7/114 (6%)

Query: 146 EEKKEEKKEEKKEERQHSPKKEKPKEEKKEEP----PKEEKPRKERPKKEEEKPKEEAPK 201
           E K  E K  + +  +  P + KP E K  EP    PK  +P+   PK  E KP E  PK
Sbjct: 859 EPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPAEPKPAEPKPAE--PK 916

Query: 202 AEELPKEEKKERRERPKKEEKPEEKKEEP-PKEEKPRKEKREKPKPEPETPAVP 254
           + E    E K    +P + +  E K  EP P E KP + K  +PKP    PA P
Sbjct: 917 SAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 970




 Score = 25.4 bits (54), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 52/114 (45%), Gaps = 7/114 (6%)

Query: 146  EEKKEEKKEEKKEERQHSPKKEKPKEEKKEEP----PKEEKPRKERPKKEEEKPKEEAPK 201
            E K  E K  + +  +  P + KP E K  EP    PK  +P+   PK  E KP E  PK
Sbjct: 1194 EPKSAEPKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPAEPKPAE--PK 1251

Query: 202  AEELPKEEKKERRERPKKEEKPEEKKEEP-PKEEKPRKEKREKPKPEPETPAVP 254
              E    E K    +P + +  E K  EP P E KP + K  +PKP    PA P
Sbjct: 1252 PAEPKPAEPKSAEPKPAEPKPAEPKSAEPKPAEPKPAEPKSAEPKPAEPKPAEP 1305



>EAY10381.1 on XP_001351563  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2149

 Score = 25.8 bits (55), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 4/30 (13%)

Query: 194  KPKEEAPKAEELPKEEKKERRERPKKEEKP 223
            KP+   PK  E+PKEE K++R+    EEKP
Sbjct: 1590 KPEAPPPKVPEIPKEEDKDKRD----EEKP 1615



>EAY10381.1 on XP_813188   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1002

 Score = 25.4 bits (54), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 10/89 (11%)

Query: 179 KEEKPRKER-----PKKEEEKPKEEAPKAEELPKEEKKERRERPKKEEKPEEKKEEPPKE 233
            E  P K+R     P+ E   PK  AP+   L +  +K+    P+K++   EK     K 
Sbjct: 689 NELNPLKKRNVAAAPEAEVSAPKG-APQNSHLSQPSEKDATPSPQKQDLSPEK----SKN 743

Query: 234 EKPRKEKREKPKPEPETPAVPAIQVDIED 262
           EK      + P  +P   +  A +  +ED
Sbjct: 744 EKHSAGSGQAPSADPAGSSTSAAEGKVED 772



>EAY10381.1 on XP_954177  TashAT1  (Establishment)  [Theileria annulata]
          Length = 463

 Score = 25.0 bits (53), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 7/55 (12%)

Query: 134 KKFEAEKTAPAKEEKKEEKKEEKKEERQHSPKKEKPKEEKKEEPPKEEKPRKERP 188
           +K+E +KT   +  K E KK      R+H P+ E+PK        K  +PRK++P
Sbjct: 410 QKYETKKTWRPRNMKTETKKTWLLRPRKHKPEPEQPKR-------KRGRPRKQKP 457




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10408.1 WD repeat protein, putative [Trichomonas
vaginalis G3]
         (1157 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAC46910  Tams1  (Invasion)  [Theileria annulata]                      28   2.2  
XP_812043   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   4.2  
XP_818708   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   8.5  
XP_816855   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   8.8  
XP_804688   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   8.9  
XP_816852   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   9.4  

>EAY10408.1 on AAC46910  Tams1  (Invasion)  [Theileria annulata]
          Length = 256

 Score = 28.5 bits (62), Expect = 2.2,   Method: Composition-based stats.
 Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 21/148 (14%)

Query: 261 DQTVRVWDSKRF--VHLSKYKSEGNRFWCVAAHPVKPI-FAAGHDNGLVIYSVTKNAPAY 317
           D+T+   D+ ++  VHL K   + + +  +  HP KP+ F    D     YS  K    Y
Sbjct: 74  DKTLYNVDTSKYDAVHLYKLTHDSDEWLKLLLHPAKPVMFKKKSDKE---YSEVKFETYY 130

Query: 318 DTVDGNIYYYKENAIRAYNIKDESDGVTGYIKQRS-STSRQSPIDP--KPTTVSYNPTHK 374
           D V      +K  + +  +    +D  TG   Q S  T ++   +   KP+ VS++    
Sbjct: 131 DDV-----LFKGKSAKELDASKVTD--TGLFTQESFGTGKKYTFNNSFKPSKVSFDKKD- 182

Query: 375 VFLVGYPDRIEIVPANGKPG-DDNQVIQ 401
              VG PD+ + +      G DD +V++
Sbjct: 183 ---VGKPDKAKFLDVFVYVGSDDKKVVR 207



>EAY10408.1 on XP_812043   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 807

 Score = 27.7 bits (60), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 15/38 (39%), Positives = 17/38 (44%)

Query: 510 TKVTEVVKTKSGVWFDSNVFVYSTRTHVKYLLINGEGG 547
           T  TE V T  GVW  S  F +    HV  L+    GG
Sbjct: 365 TAWTEAVGTLPGVWVKSQSFFWDLSLHVDALITATIGG 402



>EAY10408.1 on XP_818708   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 929

 Score = 26.9 bits (58), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 26/121 (21%), Positives = 55/121 (45%), Gaps = 23/121 (19%)

Query: 983  LLQSIPIASVSTVEEQRK------------VIDAVEICRK--YVIAAMLGIAQNSIKKPD 1028
            +L ++P+ +  T  E +K            ++D   + R+    +AA   + ++S    D
Sbjct: 375  MLVTLPVYAKETQNENKKSELHLWLTDNTHIVDIGPVSREDDEDVAASALLYKSSESTTD 434

Query: 1029 KRKLEYLLYIYALKLDEKMQNIALNLAVNIATTLGCFKTALMFATDERTRKVIESKSQGN 1088
            + K E L+ +Y  K DEK         V++ T+     +  + A  ER ++V+++  + +
Sbjct: 435  EEKKEELIALYEKKKDEK---------VDVYTSSNSLWSVRLTAQLERVKEVLKTWKEAD 485

Query: 1089 K 1089
            K
Sbjct: 486  K 486



>EAY10408.1 on XP_816855   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 754

 Score = 26.9 bits (58), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 13/32 (40%), Positives = 16/32 (50%)

Query: 510 TKVTEVVKTKSGVWFDSNVFVYSTRTHVKYLL 541
           T  TE V T  GVW  S  F +    HV+ L+
Sbjct: 311 TTWTEAVGTLPGVWVKSRSFFWDLSLHVEALI 342



>EAY10408.1 on XP_804688   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 704

 Score = 26.9 bits (58), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 13/32 (40%), Positives = 17/32 (53%)

Query: 510 TKVTEVVKTKSGVWFDSNVFVYSTRTHVKYLL 541
           T  TE V T S VW  S  F++    HV+ L+
Sbjct: 350 TAWTEAVGTLSAVWVKSRSFLWDLSLHVEALI 381



>EAY10408.1 on XP_816852   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 739

 Score = 26.6 bits (57), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 13/32 (40%), Positives = 16/32 (50%)

Query: 510 TKVTEVVKTKSGVWFDSNVFVYSTRTHVKYLL 541
           T  TE V T  GVW  S  F +    HV+ L+
Sbjct: 349 TTWTEAVGTLPGVWVKSRSFFWDLSLHVEALI 380




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10418.1 Erythrocyte membrane-associated giant protein
antigen 332 containing protein [Trichomonas vaginalis G3]
         (2792 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAL38222  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   31   1.3  
AAL38221  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   31   1.3  
AAL38220  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   31   1.3  
AAL38219  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   31   1.4  
AAL38218  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   31   1.4  
XP_817165   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   1.9  
XP_804173   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   1.9  
XP_818221   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   1.9  
XP_001351319  PfEMP1  (Establishment)  [Plasmodium falciparum]         30   2.3  
XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 30   3.3  

>EAY10418.1 on AAL38222  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2976

 Score = 30.8 bits (68), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 42/213 (19%), Positives = 89/213 (41%), Gaps = 29/213 (13%)

Query: 1435 ERIVNPDGTILEKVKRADG-----------TILEKLLNADGTYPKRTVNFDGTLTEEIVK 1483
            + I+N    I++KV + +            T  +KL N + TY ++  + D    + I +
Sbjct: 2260 DNILNKKENIIDKVIKCNCDDYKDILIQNETEYQKLQNINHTYEEKKKSIDILKIKNIKQ 2319

Query: 1484 SDGSSYTRLLNANGTIPERTTNEDGTITEKVIRADGIIIERTLNPDGTLKSERLLNADGS 1543
             +   Y   L    TI  ++  +   I   +++ + I +E  +     L  E+++    S
Sbjct: 2320 KNIQEYKNKLEQMNTIINQSIEQHVFINADILQNEKIKLEEIIKNLDIL-DEQIMTYHNS 2378

Query: 1544 VPERRNNMDGTIKERL-VRCDNSISERL---LNADGT---VPVRKQNDDSTFTETVIKGD 1596
            + E           +L ++CDN +   +   +N + T   + ++KQ +D       I+ +
Sbjct: 2379 IDELY---------KLGIQCDNHLITTISVVVNKNTTKIMIHIKKQKEDIQKINNYIQTN 2429

Query: 1597 GTTL-EKPLNFTRMYPTAYPNEEDGTTTELVVK 1628
               + E+ L F R+Y     +E+D      ++K
Sbjct: 2430 YNIINEEALQFHRLYGHNLISEDDKNNLVHIIK 2462



>EAY10418.1 on AAL38221  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2965

 Score = 30.8 bits (68), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 42/213 (19%), Positives = 89/213 (41%), Gaps = 29/213 (13%)

Query: 1435 ERIVNPDGTILEKVKRADG-----------TILEKLLNADGTYPKRTVNFDGTLTEEIVK 1483
            + I+N    I++KV + +            T  +KL N + TY ++  + D    + I +
Sbjct: 2253 DNILNKKENIIDKVIKCNCDDYKDILIQNETEYQKLQNINHTYEEKKKSIDILKIKNIKQ 2312

Query: 1484 SDGSSYTRLLNANGTIPERTTNEDGTITEKVIRADGIIIERTLNPDGTLKSERLLNADGS 1543
             +   Y   L    TI  ++  +   I   +++ + I +E  +     L  E+++    S
Sbjct: 2313 KNIQEYKNKLEQMNTIINQSIEQHVFINADILQNEKIKLEEIIKNLDIL-DEQIMTYHNS 2371

Query: 1544 VPERRNNMDGTIKERL-VRCDNSISERL---LNADGT---VPVRKQNDDSTFTETVIKGD 1596
            + E           +L ++CDN +   +   +N + T   + ++KQ +D       I+ +
Sbjct: 2372 IDELY---------KLGIQCDNHLITTISVVVNKNTTKIMIHIKKQKEDIQKINNYIQTN 2422

Query: 1597 GTTL-EKPLNFTRMYPTAYPNEEDGTTTELVVK 1628
               + E+ L F R+Y     +E+D      ++K
Sbjct: 2423 YNIINEEALQFHRLYGHNLISEDDKNNLVHIIK 2455



>EAY10418.1 on AAL38220  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2957

 Score = 30.8 bits (68), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 42/213 (19%), Positives = 89/213 (41%), Gaps = 29/213 (13%)

Query: 1435 ERIVNPDGTILEKVKRADG-----------TILEKLLNADGTYPKRTVNFDGTLTEEIVK 1483
            + I+N    I++KV + +            T  +KL N + TY ++  + D    + I +
Sbjct: 2247 DNILNKKENIIDKVIKCNCDDYKDILIQNETEYQKLQNINHTYEEKKKSIDILKIKNIKQ 2306

Query: 1484 SDGSSYTRLLNANGTIPERTTNEDGTITEKVIRADGIIIERTLNPDGTLKSERLLNADGS 1543
             +   Y   L    TI  ++  +   I   +++ + I +E  +     L  E+++    S
Sbjct: 2307 KNIQEYKNKLEQMNTIINQSIEQHVFINADILQNEKIKLEEIIKNLDIL-DEQIMTYHNS 2365

Query: 1544 VPERRNNMDGTIKERL-VRCDNSISERL---LNADGT---VPVRKQNDDSTFTETVIKGD 1596
            + E           +L ++CDN +   +   +N + T   + ++KQ +D       I+ +
Sbjct: 2366 IDELY---------KLGIQCDNHLITTISVVVNKNTTKIMIHIKKQKEDIQKINNYIQTN 2416

Query: 1597 GTTL-EKPLNFTRMYPTAYPNEEDGTTTELVVK 1628
               + E+ L F R+Y     +E+D      ++K
Sbjct: 2417 YNIINEEALQFHRLYGHNLISEDDKNNLVHIIK 2449



>EAY10418.1 on AAL38219  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2969

 Score = 30.8 bits (68), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 42/213 (19%), Positives = 89/213 (41%), Gaps = 29/213 (13%)

Query: 1435 ERIVNPDGTILEKVKRADG-----------TILEKLLNADGTYPKRTVNFDGTLTEEIVK 1483
            + I+N    I++KV + +            T  +KL N + TY ++  + D    + I +
Sbjct: 2249 DNILNKKENIIDKVIKCNCDDYKDILIQNETEYQKLQNINHTYEEKKKSIDILKIKNIKQ 2308

Query: 1484 SDGSSYTRLLNANGTIPERTTNEDGTITEKVIRADGIIIERTLNPDGTLKSERLLNADGS 1543
             +   Y   L    TI  ++  +   I   +++ + I +E  +     L  E+++    S
Sbjct: 2309 KNIQEYKNKLEQMNTIINQSIEQHVFINADILQNEKIKLEEIIKNLDIL-DEQIMTYHNS 2367

Query: 1544 VPERRNNMDGTIKERL-VRCDNSISERL---LNADGT---VPVRKQNDDSTFTETVIKGD 1596
            + E           +L ++CDN +   +   +N + T   + ++KQ +D       I+ +
Sbjct: 2368 IDELY---------KLGIQCDNHLITTISVVVNKNTTKIMIHIKKQKEDIQKINNYIQTN 2418

Query: 1597 GTTL-EKPLNFTRMYPTAYPNEEDGTTTELVVK 1628
               + E+ L F R+Y     +E+D      ++K
Sbjct: 2419 YNIINEEALQFHRLYGHNLISEDDKNNLVHIIK 2451



>EAY10418.1 on AAL38218  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2977

 Score = 30.8 bits (68), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 42/213 (19%), Positives = 89/213 (41%), Gaps = 29/213 (13%)

Query: 1435 ERIVNPDGTILEKVKRADG-----------TILEKLLNADGTYPKRTVNFDGTLTEEIVK 1483
            + I+N    I++KV + +            T  +KL N + TY ++  + D    + I +
Sbjct: 2257 DNILNKKENIIDKVIKCNCDDYKDILIQNETEYQKLQNINHTYEEKKKSIDILKIKNIKQ 2316

Query: 1484 SDGSSYTRLLNANGTIPERTTNEDGTITEKVIRADGIIIERTLNPDGTLKSERLLNADGS 1543
             +   Y   L    TI  ++  +   I   +++ + I +E  +     L  E+++    S
Sbjct: 2317 KNIQEYKNKLEQMNTIINQSIEQHVFINADILQNEKIKLEEIIKNLDIL-DEQIMTYHNS 2375

Query: 1544 VPERRNNMDGTIKERL-VRCDNSISERL---LNADGT---VPVRKQNDDSTFTETVIKGD 1596
            + E           +L ++CDN +   +   +N + T   + ++KQ +D       I+ +
Sbjct: 2376 IDELY---------KLGIQCDNHLITTISVVVNKNTTKIMIHIKKQKEDIQKINNYIQTN 2426

Query: 1597 GTTL-EKPLNFTRMYPTAYPNEEDGTTTELVVK 1628
               + E+ L F R+Y     +E+D      ++K
Sbjct: 2427 YNIINEEALQFHRLYGHNLISEDDKNNLVHIIK 2459



>EAY10418.1 on XP_817165   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 750

 Score = 30.4 bits (67), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 30/139 (21%), Positives = 61/139 (43%), Gaps = 21/139 (15%)

Query: 1750 VVNPDGTVLNKVIK---SDGSILEIFYNHDGTKPMNV---INPDETITEKIVKWDGTILE 1803
            VV  DGT++  V+    +DG    I Y+ D     ++   I+P      ++ +WDG++L 
Sbjct: 272  VVMEDGTLVFPVMAKSGNDGYCSMIIYSKDNGSTWSLSEGISPANCTDPRVTEWDGSLL- 330

Query: 1804 RVLNHDGTVPVRTLSPDEIYTAKIIKPDGTFFTKTVNANGTSPERFINADGSVTERVIRA 1863
                    + V   S   +Y ++ +   GT +T+ +   GT    ++N+     +  +R 
Sbjct: 331  --------MIVNCKSSQRVYESRDM---GTTWTRAI---GTLSGVWVNSRLYFWDLSLRV 376

Query: 1864 NGTLLESVYDKDGKLLSQR 1882
               +  ++  +   L +QR
Sbjct: 377  EALITATIEGRKVMLYTQR 395



>EAY10418.1 on XP_804173   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 746

 Score = 30.4 bits (67), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 34/151 (22%), Positives = 65/151 (43%), Gaps = 24/151 (15%)

Query: 1738 RLLNHDGSVPLRVVNPDGTVLNKVIKSDGS---ILEIFYNHDGTKPMNV---INPDETIT 1791
            R L   GS    V+  DGT++  V+   G+      I Y+ D     ++   I+P     
Sbjct: 260  RFLAAGGS---GVLMEDGTLVFPVMAKSGNGGYCSMIIYSKDNGSTWSLSKGISPANCTD 316

Query: 1792 EKIVKWDGTILERVLNHDGTVPVRTLSPDEIYTAKIIKPDGTFFTKTVNANGTSPERFIN 1851
             +I +WDG++L         + V   S   +Y ++ +   GT +T+ +   GT P  ++N
Sbjct: 317  PRITEWDGSLL---------MIVNCKSSQRVYESRDM---GTTWTEAI---GTLPGVWVN 361

Query: 1852 ADGSVTERVIRANGTLLESVYDKDGKLLSQR 1882
            +     +  +R    +  ++  +   L +QR
Sbjct: 362  SRLYFWDLSLRVEALITATIEGRKVMLYTQR 392



>EAY10418.1 on XP_818221   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 748

 Score = 30.4 bits (67), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 31/144 (21%), Positives = 64/144 (44%), Gaps = 28/144 (19%)

Query: 1743 DGSV--PLRVVNPDGTVLNKVIKS--DGSILEIFYNHDGTKPMNVINPDETITEKIVKWD 1798
            DG++  PL   + +G   + +I S  +GS   +    +G  P N  +P      ++ +WD
Sbjct: 275  DGTIVFPLMAKSGNGGYYSMIIYSTDNGSTWSL---SEGISPANCTDP------RVTEWD 325

Query: 1799 GTILERVLNHDGTVPVRTLSPDEIYTAKIIKPDGTFFTKTVNANGTSPERFINADGSVTE 1858
            G++L         + V   S   +Y ++ +   GT +T+ +   GT P  ++N+     +
Sbjct: 326  GSLL---------MIVNCKSSQRVYESRDM---GTTWTEAI---GTLPGVWVNSRLYFWD 370

Query: 1859 RVIRANGTLLESVYDKDGKLLSQR 1882
              +R    +  ++  +   L +QR
Sbjct: 371  LSLRVEALITATIEGRKVMLCTQR 394



>EAY10418.1 on XP_001351319  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2646

 Score = 30.0 bits (66), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 12/86 (13%)

Query: 944  SEKVTVGPNATKERFLNADGTVPEKNVQPDGTSQEKLFRADGVMIERTIGPNGALKYKRY 1003
            +EKV  G  A +E   N   T   K+  PD T+  ++   D      T   +   KYK++
Sbjct: 524  AEKVEGGWKAKEE---NCSQT---KDYDPDKTTTIEILTGD------TRKSDMVQKYKKF 571

Query: 1004 FNHDGSNPEKSQNPNGTITQKVLRPD 1029
             N +G N EKS  PN T  +K  + D
Sbjct: 572  CNGNGGNGEKSATPNATSREKGKKGD 597



>EAY10418.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 29.6 bits (65), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 55/250 (22%), Positives = 107/250 (42%), Gaps = 43/250 (17%)

Query: 425  LEAELASARAEISRLSSENAAAVQKELDAKVAENENL-------KAELQRVTQNDEIRKQ 477
            L+ E    R E  RL  E    +QKE + K  E E L       + E +R+ + +E+++Q
Sbjct: 2747 LQKEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQ 2806

Query: 478  NEDLIARIG--ELETELAAAKMAATTLSSEKNTESTELENLREEHQKTVQENAKLVQENA 535
             ++ + R    +L+ E    +     L  E+  +  E E L++E +   QE  +L     
Sbjct: 2807 EQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQERL----E 2862

Query: 536  KMQAQLAEAQE-------------LASALVFQPPEYKENQIPGL--------IQELQSMM 574
            + + +LAE ++             +   L  +  E  +N+   L        ++ LQ+++
Sbjct: 2863 RKKIELAEREQHIKSKLESDMVKIIKDELTKEKDEIIKNKDIKLRHSLEQKWLKHLQNIL 2922

Query: 575  AESPESMKGKLGEIIRKAQRADEEIESE----RKLTNQSFQQLSNIHGNLMKSFNENFKQ 630
            +   +S+  K  E+I+     D E + +      L NQ +  L      ++K + EN K+
Sbjct: 2923 SLKIDSLLNKNDEVIK-----DNETQLKTNILNSLKNQLYLNLKRELNEIIKEYEENQKK 2977

Query: 631  FYAAAELMED 640
               + +L+ D
Sbjct: 2978 ILHSNQLVND 2987




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10421.1 hypothetical protein TVAG_271120 [Trichomonas
vaginalis G3]
         (178 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAF75871  Hsp70  (Heat shock protein)  [Cryptosporidium parvum]        27   0.80 

>EAY10421.1 on AAF75871  Hsp70  (Heat shock protein)  [Cryptosporidium parvum]
          Length = 255

 Score = 26.6 bits (57), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 140 FCVHDFARRSVYMDVLNTKLALISQRMSIE 169
           FCV DF R++  MD+ +   AL   R   E
Sbjct: 219 FCVQDFKRKNRGMDLTSNARALRRLRTQCE 248




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10425.1 Beige/BEACH domain containing protein
[Trichomonas vaginalis G3]
         (2348 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_810932   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   1.9  
XP_817310   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   7.7  

>EAY10425.1 on XP_810932   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 753

 Score = 30.0 bits (66), Expect = 1.9,   Method: Composition-based stats.
 Identities = 37/146 (25%), Positives = 61/146 (41%), Gaps = 15/146 (10%)

Query: 390 ISEGLDL--AGRGLISPTDLKNGNLLELFIVLQSPDFIA----HILEIFTKLTPCLASAY 443
           + EGL L  +  G++   + ++ NL  +F+   S DF       I  + +  TP L +  
Sbjct: 525 VKEGLQLTESNSGVLWSVNTRDNNLRHVFL---SHDFTVVATVSIKNVPSGKTPLLTAML 581

Query: 444 GAENDPNKKFIIITQILHSQQYFKDQNKFLNSFSMFIIEDKEKHIVLTRLMEMCFKSMTD 503
           G  N P+   I+ T     +  FKD+    +++     E K++H V   L         D
Sbjct: 582 GDNNSPHTMGILYTADRKMETVFKDKTTRSSTW-----EPKKEHQVALMLQGKKASVYID 636

Query: 504 EIMLAISYVFMQDENTCLVFLNKCNG 529
              L    V + DE T L  ++ C G
Sbjct: 637 GRSLGEGEVLLTDE-TPLELVHFCFG 661



>EAY10425.1 on XP_817310   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 904

 Score = 28.1 bits (61), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 1750 SLFCGHFAVTVNKSDILLVRKRTYNYQNNCAEIHTW 1785
             +  G    T+ K D++LV    Y  +N   E+H W
Sbjct: 378  GVGSGFITATIEKRDVMLVTLPVYAKENEKGELHLW 413




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10426.1 hypothetical protein TVAG_271170 [Trichomonas
vaginalis G3]
         (177 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_803347   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   1.5  
XP_802455   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   1.6  
XP_816720   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   2.6  
XP_813025   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   2.7  
XP_001609539  variant erythrocyte surface antigen-1, beta subuni...    25   3.0  
XP_654447  Igl1  (Adhesin)  [Entamoeba histolytica]                    25   3.9  
XP_820062   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   4.6  
XP_001350796  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   4.7  

>EAY10426.1 on XP_803347   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 688

 Score = 25.8 bits (55), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 34  INHVNPKVNIEDPIFRAIMDDDLKTFIL 61
           I H  PK     P+ R +MDD+ KT + 
Sbjct: 412 IVHDEPKKRTPIPLIRVVMDDNGKTVLF 439



>EAY10426.1 on XP_802455   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 356

 Score = 25.8 bits (55), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 36  HVNPKVNIEDPIFRAIMDDDLKTFIL 61
           H  PK     P+ R +MDD+ KT + 
Sbjct: 160 HDRPKKRTPIPLIRVVMDDEDKTVLF 185



>EAY10426.1 on XP_816720   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 782

 Score = 25.0 bits (53), Expect = 2.6,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 29  LKPSLINHVNPKVNIEDPIFRAIMDDDLKTFIL 61
           L  +L  H  PK +   P+  A MDD+ KT +L
Sbjct: 584 LVATLSVHGEPKGDTPIPLMGATMDDNKKTVLL 616



>EAY10426.1 on XP_813025   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 481

 Score = 25.0 bits (53), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 15/49 (30%), Positives = 23/49 (46%)

Query: 29  LKPSLINHVNPKVNIEDPIFRAIMDDDLKTFILLTEMESFDKNKTLSSG 77
           L  +L  H  PK +   P+  A M+D+ KT +L    +   K + L  G
Sbjct: 284 LVATLSVHGEPKGDTPIPLMGATMNDNKKTVLLGLSYDKEGKWQVLCGG 332



>EAY10426.1 on XP_001609539  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 884

 Score = 25.0 bits (53), Expect = 3.0,   Method: Composition-based stats.
 Identities = 10/26 (38%), Positives = 16/26 (61%)

Query: 114 DICLGLSFLGGNADIISECLKYQKPN 139
           + CLGLS   GN + + + L  ++PN
Sbjct: 294 EYCLGLSGNTGNGEFVQKLLSGKQPN 319



>EAY10426.1 on XP_654447  Igl1  (Adhesin)  [Entamoeba histolytica]
          Length = 1101

 Score = 24.6 bits (52), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 5/42 (11%)

Query: 97  AANCFKFLRTEYESKITDICLGL-SFLGGNA----DIISECL 133
           A NC   L +   SK  D C G+ S  GG      D I++C+
Sbjct: 149 AENCVGLLASSTSSKTCDKCFGMYSLQGGKCTQKNDKINKCI 190



>EAY10426.1 on XP_820062   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 898

 Score = 24.3 bits (51), Expect = 4.6,   Method: Composition-based stats.
 Identities = 9/26 (34%), Positives = 14/26 (53%)

Query: 36  HVNPKVNIEDPIFRAIMDDDLKTFIL 61
           H  PK     P+ R +MDD+ +T + 
Sbjct: 567 HDEPKKRTPIPLIRVVMDDNDRTVLF 592



>EAY10426.1 on XP_001350796  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2646

 Score = 24.6 bits (52), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 6/43 (13%)

Query: 82  NNKRYTLLEICSYQGAANCFKFLRTEYESKITDICLGLSFLGG 124
           NNK+Y     CS  G  +C K +R +Y   I D C   SF  G
Sbjct: 337 NNKKY-----CSGDGF-DCTKTIRAKYIYAIGDECTKCSFWCG 373




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10431.1 hypothetical protein TVAG_271220 [Trichomonas
vaginalis G3]
         (182 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_817820   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.21 
XP_818470   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.32 
XP_816823   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.1  
XP_001611897  variant erythrocyte surface antigen-1, alpha subun...    26   1.2  
XP_816725   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   1.5  
XP_805509   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   2.8  
XP_811702   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   3.6  
XP_820795   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   3.6  
XP_966305  PfEMP1  (Establishment)  [Plasmodium falciparum]            24   8.7  

>EAY10431.1 on XP_817820   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 896

 Score = 28.5 bits (62), Expect = 0.21,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 16/71 (22%)

Query: 104 QDKLFGLCEKAAEEGRSS------------AKITEVITLENEITHIISDLVSSGKFPLTP 151
           ++KL  L EK    GRSS             ++ EV+    E+  I+S L  SG    +P
Sbjct: 504 EEKLIALYEKKRGNGRSSLGMVSVLLTEQLQRVKEVLATWKEVDEIVSKLCPSG----SP 559

Query: 152 ELSQERSDAVT 162
           E S    DA +
Sbjct: 560 EKSASPDDACS 570



>EAY10431.1 on XP_818470   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 868

 Score = 28.1 bits (61), Expect = 0.32,   Method: Composition-based stats.
 Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 17/94 (18%)

Query: 82  MNEQPKEELNCSDVLI-STILGIQDKLFGLCEKAAEEGRSS------------AKITEVI 128
           ++E+ +EE+  S +L  S     ++KL  L EK    GRSS             ++ EV+
Sbjct: 426 VSEEDEEEITASSLLYKSGKDNNEEKLIALYEKKRGNGRSSLGMVSVLLTEQLKRVKEVL 485

Query: 129 TLENEITHIISDLVSSGKFPLTPELSQERSDAVT 162
               E+   +S L  SG    +PE S    DA +
Sbjct: 486 ATWKEVDERVSQLCPSG----SPEKSPSPDDACS 515



>EAY10431.1 on XP_816823   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 772

 Score = 26.6 bits (57), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 6/53 (11%)

Query: 42  ELTNALPDFEAMATES-EAKDKEIKELDAQILEMQKLLLKEMNEQPKEELNCS 93
           +L     +F  +A+E  E  DKE KELD   L+ Q L      E P E  +C+
Sbjct: 113 QLKEGGSNFTGIASELLEWTDKESKELDTNKLKTQVL-----EECPAENKDCA 160



>EAY10431.1 on XP_001611897  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1369

 Score = 26.2 bits (56), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 4/55 (7%)

Query: 57  SEAKDKEIKELDAQILEMQKLLLKEMNEQPKEELNCSDVLISTILGIQDKLFGLC 111
           S AKD+ I E+  ++LE+   L + + E+ KEE+N  +  ++  +   DKL  +C
Sbjct: 800 SSAKDR-ISEVIHKVLEVLTTLKEGVKEKIKEEMNGHEKALNDAI---DKLKDIC 850



>EAY10431.1 on XP_816725   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 775

 Score = 26.2 bits (56), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 3/52 (5%)

Query: 27  ETLNSVYSSQRAILEELTNALPDFEAMATES-EAKDKEIKELDAQILEMQKL 77
           E    V++   A   E +N+   F  +A+E  E  DKE KELDA  L  Q L
Sbjct: 102 EVNGGVFAVAEAQCTETSNS--GFTGIASELLEWTDKESKELDATKLRTQVL 151



>EAY10431.1 on XP_805509   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 777

 Score = 25.0 bits (53), Expect = 2.8,   Method: Composition-based stats.
 Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 1/29 (3%)

Query: 50  FEAMATES-EAKDKEIKELDAQILEMQKL 77
           F  +A+E  E  DKE KELDA  L+ Q L
Sbjct: 123 FTGIASELLEWTDKESKELDANKLKTQVL 151



>EAY10431.1 on XP_811702   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 776

 Score = 25.0 bits (53), Expect = 3.6,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 18/84 (21%)

Query: 50  FEAMATES-EAKDKEIKELDAQILEMQKLLLKEMNEQPKEELNCSDVLISTILGIQDKLF 108
           F  +A+E  E  DKE KELD   L+ Q L      E P    +C+               
Sbjct: 122 FTGIASELLEWTDKESKELDTNKLKTQVL-----EECPAGNNSCASQT------------ 164

Query: 109 GLCEKAAEEGRSSAKITEVITLEN 132
           G  E +A + R+  +++   T+ N
Sbjct: 165 GAQEASASQSRTKVRVSRPTTVVN 188



>EAY10431.1 on XP_820795   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 782

 Score = 25.0 bits (53), Expect = 3.6,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 18/84 (21%)

Query: 50  FEAMATES-EAKDKEIKELDAQILEMQKLLLKEMNEQPKEELNCSDVLISTILGIQDKLF 108
           F  +A+E  E  DKE KELD   L+ Q L      E P    +C+               
Sbjct: 127 FTGIASELLEWTDKESKELDTNKLKTQVL-----EECPAGNNSCASQT------------ 169

Query: 109 GLCEKAAEEGRSSAKITEVITLEN 132
           G  E +A + R+  +++   T+ N
Sbjct: 170 GAQEASASQSRTKVRVSRPTTVVN 193



>EAY10431.1 on XP_966305  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3954

 Score = 23.9 bits (50), Expect = 8.7,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 43/98 (43%), Gaps = 8/98 (8%)

Query: 79   LKEMNEQPKEELNCSDVLISTILGIQDKLFGLCEKAAEEGRSSAKITEVITLENEITHII 138
            LK++ +Q  E  N  D + + I  +QDK+     K    G+++       + E E + + 
Sbjct: 2332 LKDVKDQKAENCNKGDFITNLISKLQDKITSCQNKHNPNGKTACDEIPPHSDEEETSLLD 2391

Query: 139  SDLVSSGKFPLTPEL------SQERSDAVTLHKDKVIP 170
             D  +  K  ++P+        + ++D+  L  DK  P
Sbjct: 2392 DDTSTQEK--MSPDFCPSDMPEKPKTDSDILCDDKKEP 2427




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10437.1 hypothetical protein TVAG_271280 [Trichomonas
vaginalis G3]
         (147 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10441.1 hypothetical protein TVAG_271320 [Trichomonas
vaginalis G3]
         (132 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001350410  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   3.7  
XP_805897   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   6.1  
XP_808562   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   6.1  

>EAY10441.1 on XP_001350410  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2178

 Score = 24.3 bits (51), Expect = 3.7,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 17/28 (60%)

Query: 52   SFEEGLTNKKDVIDSKRESLAAFLRKHP 79
            S E G+TNKKD+++   E+L    +  P
Sbjct: 1536 SSENGVTNKKDIVECLLENLKTKAKTCP 1563



>EAY10441.1 on XP_805897   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 755

 Score = 23.5 bits (49), Expect = 6.1,   Method: Composition-based stats.
 Identities = 10/27 (37%), Positives = 17/27 (62%)

Query: 43  LEATAGVILSFEEGLTNKKDVIDSKRE 69
           L +  GVI +F EG TN K   +++++
Sbjct: 113 LVSAGGVIAAFAEGHTNAKVYTNAQKD 139



>EAY10441.1 on XP_808562   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 755

 Score = 23.5 bits (49), Expect = 6.1,   Method: Composition-based stats.
 Identities = 10/27 (37%), Positives = 17/27 (62%)

Query: 43  LEATAGVILSFEEGLTNKKDVIDSKRE 69
           L +  GVI +F EG TN K   +++++
Sbjct: 113 LVSAGGVIAAFAEGHTNAKVYTNAQKD 139




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10443.1 hypothetical protein TVAG_271340 [Trichomonas
vaginalis G3]
         (168 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001350797  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   2.9  
XP_803409  VSG  (Establishment)  [Trypanosoma brucei]                  25   3.8  

>EAY10443.1 on XP_001350797  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2287

 Score = 25.0 bits (53), Expect = 2.9,   Method: Composition-based stats.
 Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 3/37 (8%)

Query: 16   DFFFGSCAASTSLYGSDINLKSVMTTSFFMKSTVYVH 52
            DF   SCA S S Y   IN K      +  +  +YVH
Sbjct: 1322 DFIGSSCATSCSYYRKWINTKK---AEYEKQEKIYVH 1355



>EAY10443.1 on XP_803409  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 501

 Score = 24.6 bits (52), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)

Query: 75  LEKLQDLREEFKSRLKQENLLQEYMLILYTLIDGSHL---PSEYTATLDALK 123
           L+  ++  E+ K+ LKQ     E M  LYT++ G+     P+E++A    LK
Sbjct: 290 LDTTENALEDPKAMLKQLATEAEAMEALYTVLSGASPNKKPTEFSAQNQQLK 341




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10444.1 hypothetical protein TVAG_271350 [Trichomonas
vaginalis G3]
         (117 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_651378  Lgl4  (Adhesin)  [Entamoeba histolytica]                    24   2.6  
AAB60238  Tams1  (Invasion)  [Theileria annulata]                      23   3.5  
AAC46910  Tams1  (Invasion)  [Theileria annulata]                      23   5.3  

>EAY10444.1 on XP_651378  Lgl4  (Adhesin)  [Entamoeba histolytica]
          Length = 271

 Score = 23.9 bits (50), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)

Query: 77  YMNLYDEAMFHAPTKKEPDASRLHEFADHDGYSDYSMPVRL 117
           Y   Y++ +   P K+E +  +  EFA +  Y+ +S+P R+
Sbjct: 117 YQGNYEQNILLRPLKQENEL-QFFEFAPYKMYTSFSIPRRV 156



>EAY10444.1 on AAB60238  Tams1  (Invasion)  [Theileria annulata]
          Length = 281

 Score = 23.5 bits (49), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 8/21 (38%), Positives = 13/21 (61%)

Query: 81  YDEAMFHAPTKKEPDASRLHE 101
           YD+ +F   + KE DAS+  +
Sbjct: 131 YDDVLFKGKSAKELDASKFED 151



>EAY10444.1 on AAC46910  Tams1  (Invasion)  [Theileria annulata]
          Length = 256

 Score = 23.1 bits (48), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query: 81  YDEAMFHAPTKKEPDASRL 99
           YD+ +F   + KE DAS++
Sbjct: 130 YDDVLFKGKSAKELDASKV 148




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10447.1 hypothetical protein TVAG_271380 [Trichomonas
vaginalis G3]
         (125 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_812607   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   0.31 
XP_001349438  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   1.9  
XP_001347690  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   4.4  

>EAY10447.1 on XP_812607   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 957

 Score = 26.9 bits (58), Expect = 0.31,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 6/41 (14%)

Query: 81  EKMTEASREFVDCYYDSNENKLNVLRKGTSPIITLPSYSSI 121
           EK+      F+    DS+EN  NV+      ++TLP YS +
Sbjct: 364 EKVKAVRSGFITAKIDSDENNRNVM------LVTLPVYSEV 398



>EAY10447.1 on XP_001349438  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2265

 Score = 24.6 bits (52), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 12/41 (29%), Positives = 22/41 (53%)

Query: 42  FLAIPLEMTDSSKSVKKRFDMRYYIKPNMTTQELNEGLMEK 82
           FL   ++     +++KK F  +  I P  T  ++ EG++EK
Sbjct: 707 FLKWVVQKKTEWENIKKHFKKQKDIPPGFTHDDVLEGVLEK 747



>EAY10447.1 on XP_001347690  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2215

 Score = 23.9 bits (50), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 14/48 (29%)

Query: 68  PNMTTQELNEGLMEKMTEASR--------------EFVDCYYDSNENK 101
           P +T +E   G+++K ++  +              E   CYYD NENK
Sbjct: 517 PVLTPEEGQSGILKKYSKFCKNGATGEKSKNGNQIETWKCYYDENENK 564




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10451.1 hypothetical protein TVAG_271420 [Trichomonas
vaginalis G3]
         (90 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 27   0.11 
XP_001350082  Rh2b  (Adhesin)  [Plasmodium falciparum]                 25   0.96 
CAA70921  MIC5  (Others)  [Toxoplasma gondii]                          22   5.2  
XP_822014   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   6.4  
XP_822006   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   7.8  
XP_821405   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   8.0  
XP_001609041  variant erythrocyte surface antigen-1, alpha subun...    22   8.9  

>EAY10451.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 27.3 bits (59), Expect = 0.11,   Method: Composition-based stats.
 Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 4/78 (5%)

Query: 17   EALKKEIREQIL--SELKEQKQE--QKPERPKRKLSEKQLAALAAGRQKNPRLLAKKARE 72
            E L++E +EQ+    ELK Q+QE  QK E  KR+  E+        RQ+  RL  +K  +
Sbjct: 2759 ERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQERLEREKQEQ 2818

Query: 73   EAKAKEEQKAKEAEVKKE 90
              K +E ++ ++  ++KE
Sbjct: 2819 LQKEEELKRQEQERLQKE 2836




 Score = 26.9 bits (58), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 43/74 (58%), Gaps = 2/74 (2%)

Query: 17   EALKKEIREQILSELKEQKQEQKPERPKRKLSEKQLAALAAGRQKNPRLLAKKAREEAKA 76
            E LK++ +E++  E ++Q+Q QK E  KR+  E+     A  RQ+  RL  ++  +  + 
Sbjct: 2751 EELKRQEQERL--EREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQ 2808

Query: 77   KEEQKAKEAEVKKE 90
            +  ++ K+ +++KE
Sbjct: 2809 ERLEREKQEQLQKE 2822




 Score = 25.4 bits (54), Expect = 0.49,   Method: Composition-based stats.
 Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 8/76 (10%)

Query: 17   EALKKEIREQILSELKEQKQEQKPERPKRKLSEKQLAALAAGRQKNPRLLAKKAREEAKA 76
            EALK++ +E++  E + ++QEQ  ER +R+  E+        RQ+  RL     +EEA  
Sbjct: 2787 EALKRQEQERLQKEEELKRQEQ--ERLEREKQEQLQKEEELKRQEQERL----QKEEALK 2840

Query: 77   KEEQK--AKEAEVKKE 90
            ++EQ+   KE E+K++
Sbjct: 2841 RQEQERLQKEEELKRQ 2856




 Score = 25.0 bits (53), Expect = 0.65,   Method: Composition-based stats.
 Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 5/72 (6%)

Query: 17   EALKKEIREQILSELKEQKQEQKPERPKRKLSEKQLAALAAGRQKNPRLLAKKAREEAKA 76
            E LK++ +E++  E ++Q+Q QK E  KR+  E+     A  RQ+  RL   +  EE K 
Sbjct: 2801 EELKRQEQERL--EREKQEQLQKEEELKRQEQERLQKEEALKRQEQERL---QKEEELKR 2855

Query: 77   KEEQKAKEAEVK 88
            +E+++ +  +++
Sbjct: 2856 QEQERLERKKIE 2867




 Score = 23.1 bits (48), Expect = 3.9,   Method: Composition-based stats.
 Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 4/77 (5%)

Query: 17   EALKKEIREQIL--SELKEQKQE--QKPERPKRKLSEKQLAALAAGRQKNPRLLAKKARE 72
            E L++E +EQ+    ELK Q+QE  QK E  KR+  E+        RQ+  RL  KK   
Sbjct: 2809 ERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQERLERKKIEL 2868

Query: 73   EAKAKEEQKAKEAEVKK 89
              + +  +   E+++ K
Sbjct: 2869 AEREQHIKSKLESDMVK 2885




 Score = 22.7 bits (47), Expect = 4.2,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 43/73 (58%), Gaps = 4/73 (5%)

Query: 18   ALKKEIREQILSELKEQKQEQKPERPKRKLSEKQLAALAAGRQKNPRLLAKKAREEAKAK 77
            ALK++ +E++  E  E+ + Q+ ER +R+  E+        RQ+  RL  ++A +  + +
Sbjct: 2738 ALKRQEQERLQKE--EELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALK--RQE 2793

Query: 78   EEQKAKEAEVKKE 90
            +E+  KE E+K++
Sbjct: 2794 QERLQKEEELKRQ 2806



>EAY10451.1 on XP_001350082  Rh2b  (Adhesin)  [Plasmodium falciparum]
          Length = 1115

 Score = 24.6 bits (52), Expect = 0.96,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 36/73 (49%)

Query: 17  EALKKEIREQILSELKEQKQEQKPERPKRKLSEKQLAALAAGRQKNPRLLAKKAREEAKA 76
           E LK++ +E++  E +EQ Q+++  R K +  ++Q        QK P ++ +   +  K 
Sbjct: 611 EELKRQEQERLEREKQEQLQKEEELRKKEQEKQQQRNIQELEEQKKPEIINEALVKGDKI 670

Query: 77  KEEQKAKEAEVKK 89
            E    +  E+ K
Sbjct: 671 LEGSDQRNMELSK 683



>EAY10451.1 on CAA70921  MIC5  (Others)  [Toxoplasma gondii]
          Length = 231

 Score = 22.3 bits (46), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 12/31 (38%), Positives = 19/31 (61%)

Query: 21  KEIREQILSELKEQKQEQKPERPKRKLSEKQ 51
           KE +E+I   ++E K E  PE  +  ++EKQ
Sbjct: 135 KEFQEEIKEGVEETKHEDDPEMTRLMVTEKQ 165



>EAY10451.1 on XP_822014   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 950

 Score = 22.3 bits (46), Expect = 6.4,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 5/48 (10%)

Query: 17  EALKKEIRE-----QILSELKEQKQEQKPERPKRKLSEKQLAALAAGR 59
           E LK+E+ E     Q+L E    ++ Q P +  +  S +++  L  GR
Sbjct: 191 ETLKEELHENKLKTQVLDECSASEERQCPSQAVKPDSSQRVMNLRVGR 238



>EAY10451.1 on XP_822006   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 845

 Score = 21.9 bits (45), Expect = 7.8,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 5/48 (10%)

Query: 17  EALKKEIRE-----QILSELKEQKQEQKPERPKRKLSEKQLAALAAGR 59
           E LK+E+ E     Q+L E    ++ Q P +     S +++  L  GR
Sbjct: 136 ETLKEELHESKLKTQVLDECSASEERQCPSQAVEPDSSQRVMKLRVGR 183



>EAY10451.1 on XP_821405   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 851

 Score = 21.9 bits (45), Expect = 8.0,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 5/48 (10%)

Query: 17  EALKKEIRE-----QILSELKEQKQEQKPERPKRKLSEKQLAALAAGR 59
           E LK+E+ E     Q+L E    ++ Q P +  +  S +++  L  GR
Sbjct: 136 ETLKEELHESKLKTQVLDECSASEERQCPSQAVKPDSSQRVMNLRVGR 183



>EAY10451.1 on XP_001609041  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1318

 Score = 21.9 bits (45), Expect = 8.9,   Method: Composition-based stats.
 Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 16  VEALKKEIREQILSELKEQKQEQKPERPKRKLSEK 50
           +EALKKE+ +Q L E+ E++Q    +  K  + EK
Sbjct: 788 LEALKKEMEKQ-LKEVLEKEQSDMDDITKWFIREK 821




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10457.1 hypothetical protein TVAG_483670 [Trichomonas
vaginalis G3]
         (288 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609315  variant erythrocyte surface antigen-1, alpha subun...    31   0.10 
XP_001609666  variant erythrocyte surface antigen-1, alpha subun...    28   0.50 
XP_001350413  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   3.5  
XP_845138  VSG  (Establishment)  [Trypanosoma brucei]                  25   3.9  

>EAY10457.1 on XP_001609315  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1338

 Score = 30.8 bits (68), Expect = 0.10,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 46/87 (52%), Gaps = 11/87 (12%)

Query: 91  KINKKLQRKIEDLQSSKENATKLKNQLAKSCELIHRLQTDQESLQLKLAKQ--ESYRIEI 148
           +I+  L +K+E      ++  +LK+ L K  E++ +L   QE+L+ K   +  E  ++ +
Sbjct: 668 EISDALVKKVEASGGDGDDGKELKDLLEKIGEVVVQLGNAQEALEGKAESKVIEGVKVAL 727

Query: 149 AKLKSD---------NDDLSYQVRQLT 166
            K K++         N++L  ++++LT
Sbjct: 728 TKAKTELEGVVDENANNELKEKIKELT 754



>EAY10457.1 on XP_001609666  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1269

 Score = 28.5 bits (62), Expect = 0.50,   Method: Composition-based stats.
 Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 24/108 (22%)

Query: 94  KKLQRKIEDLQSSKEN-ATKLKNQLAKSCELIHRLQTDQESLQLKLAKQESYRIEIAKLK 152
           K+L++ +  + S K+  A KLK+ L K  E++ +L   QE+L+ K               
Sbjct: 590 KELKKILWKVPSGKDTLAEKLKDVLEKIGEVVVQLGNAQEALETK--------------- 634

Query: 153 SDNDDLSYQVRQLTEKLNNNSQHLSTAKHLAKQFKSKLIKNKQKFQQL 200
            D D     + ++ E L    + L TAK+     K KL + K+K  +L
Sbjct: 635 -DKD----VIEKVKEALRKAKEGLETAKN---GLKDKLEEAKKKLDEL 674



>EAY10457.1 on XP_001350413  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2860

 Score = 25.8 bits (55), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 70/172 (40%), Gaps = 36/172 (20%)

Query: 14   LKLIKNQIENSADINEVRKGFQELCGMFELSNIINSLLIQKFQQHNQENQKITQQ----- 68
            +KL    +EN      ++K FQ      + +     LL QK++  N  + K+  Q     
Sbjct: 1292 IKLCIYYLENHTQKGNIKKEFQLREAFIKCAGAEIFLLWQKYKTDNNSDTKLQTQLESGQ 1351

Query: 69   -NEEIKRLNDKMLETEIVLRNTC----------------KINKKLQRKIEDLQSSKENAT 111
              EE KR   +M  T    R+ C                 +N+ L     + Q++ EN  
Sbjct: 1352 IPEEFKR---QMFYTFGDFRDLCLGNDIGKADNTKDISTTVNRILSVTNGETQTTAENWW 1408

Query: 112  KLKNQLAKS------CELIHRLQT-DQESLQLKLAKQESYRIEIAKLK-SDN 155
            + KN  A+S      C L H +   D+E++Q  L    SY+ ++ K   SDN
Sbjct: 1409 E-KN--AESIWQGMLCGLSHAVSARDKETVQKTLTNNPSYKYDLVKFSGSDN 1457



>EAY10457.1 on XP_845138  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 485

 Score = 25.4 bits (54), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 51/120 (42%), Gaps = 16/120 (13%)

Query: 66  TQQNEEIKRLNDKMLETEIVLRNTCKINKKLQRK----IEDLQSSKENATKLKNQLAKSC 121
           T    ++K  NDK L T+  L   C I  +++ K     + L ++ +  +  +  LAK  
Sbjct: 14  TANRTKVKAANDKAL-TKNGLEQVCDIAAEVRAKEQVHADGLTAAADKLSANQAVLAKVR 72

Query: 122 ELIHRLQTDQESLQLKLAKQESYRI---EIAKLKSDNDDLS--------YQVRQLTEKLN 170
            LI    T QE+LQL+      +R    E AK       L+        Y +R L E LN
Sbjct: 73  ILIAAASTAQEALQLQAISAALHRTAAEEAAKFTKATAMLAIEAIRRSNYLLRGLYEYLN 132




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10462.1 hypothetical protein TVAG_483720 [Trichomonas
vaginalis G3]
         (302 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_818892   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.4  
XP_813123   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   2.5  
XP_814219   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   2.6  
XP_818893   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   2.6  
XP_816853   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   3.2  
AAC80459  Oligopeptidase B  (Others)  [Trypanosoma brucei]             24   9.9  

>EAY10462.1 on XP_818892   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 956

 Score = 26.6 bits (57), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 20/42 (47%)

Query: 230 NPETDKSEDENIESVNLYNDSIEEESEEEEANPDAKALEQQI 271
           NPE   S  EN E+V   N   EEE   ++   +A AL   +
Sbjct: 881 NPEAGVSSGENGETVKGTNGQEEEEIHPQDGELNATALSSSL 922



>EAY10462.1 on XP_813123   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1048

 Score = 26.2 bits (56), Expect = 2.5,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 26/52 (50%)

Query: 230 NPETDKSEDENIESVNLYNDSIEEESEEEEANPDAKALEQQILTLLSTGVYD 281
           N +  + E     ++N  N+S++ +SE +  +P    L +     +S+G YD
Sbjct: 800 NAQLSEGETSQQATLNEDNESMQRDSEMQPQDPQPAELTEVADVEMSSGSYD 851



>EAY10462.1 on XP_814219   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 958

 Score = 26.2 bits (56), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 20/42 (47%)

Query: 230 NPETDKSEDENIESVNLYNDSIEEESEEEEANPDAKALEQQI 271
           NPE   S  EN E+V   N   EEE   ++   +A AL   +
Sbjct: 883 NPEAGVSSGENGETVKGTNGQEEEEIHPQDGELNATALSSSL 924



>EAY10462.1 on XP_818893   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 956

 Score = 26.2 bits (56), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 20/42 (47%)

Query: 230 NPETDKSEDENIESVNLYNDSIEEESEEEEANPDAKALEQQI 271
           NPE   S  EN E+V   N   EEE   ++   +A AL   +
Sbjct: 881 NPEAGVSSGENGETVKGTNGQEEEEIHPQDGELNATALSSSL 922



>EAY10462.1 on XP_816853   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1044

 Score = 26.2 bits (56), Expect = 3.2,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 44/114 (38%)

Query: 172 EERKILLDELKRKIDIEQGKLTDDLALLEQYRMEILGQTKSPRKKSRHSQSIVNSWKPNP 231
           EE     DEL      EQG  + D  +       ++  +  P        +  +    N 
Sbjct: 740 EESATSHDELNESDTDEQGDNSVDDPVPAASSSTVVAGSSVPEPAIATESADNSRSDDNA 799

Query: 232 ETDKSEDENIESVNLYNDSIEEESEEEEANPDAKALEQQILTLLSTGVYDETDP 285
           +  + E    ++ N  N S++  S+ +  +P +  L +     +S+G YDE  P
Sbjct: 800 QLSEEETSWQDTPNEENKSMQRGSDLQPQDPQSTKLTEVTDVEMSSGSYDEELP 853



>EAY10462.1 on AAC80459  Oligopeptidase B  (Others)  [Trypanosoma brucei]
          Length = 715

 Score = 24.3 bits (51), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)

Query: 102 RYDNTMDIEVEAKLKVQKEQLEQRQMNTLKDL 133
           R DN  D EV A L ++K+  E+R ++ +KDL
Sbjct: 45  RDDNRADPEVLAHLHLEKDYYEKRAVD-IKDL 75




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10465.1 hypothetical protein TVAG_483750 [Trichomonas
vaginalis G3]
         (860 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_818862   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.49 
XP_809659   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   1.3  
XP_001350415  PfEMP1  (Establishment)  [Plasmodium falciparum]         29   1.8  
XP_804139   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   2.6  

>EAY10465.1 on XP_818862   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 790

 Score = 30.4 bits (67), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 506 PNEVINAIYTSPKISQKEFAPMISSPSAIERIYELKNGKLKTSWLRAA-FVLQ 557
           P  + +A+    K S     PM   P A+E + E    K  TSW     FV+Q
Sbjct: 710 PQTIASAVSGPEKTSAAPEVPMTLDPHAVEEVSEGGAAKKNTSWTEGVQFVVQ 762



>EAY10465.1 on XP_809659   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 796

 Score = 28.9 bits (63), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 15/46 (32%), Positives = 19/46 (41%)

Query: 504 VKPNEVINAIYTSPKISQKEFAPMISSPSAIERIYELKNGKLKTSW 549
           + P  V  A+    K S     PM   P A+E + E    K  TSW
Sbjct: 714 IAPKPVAPAVPGPEKNSAASAVPMTLDPHAVEEVSEGGAAKRNTSW 759



>EAY10465.1 on XP_001350415  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3056

 Score = 28.9 bits (63), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 40/104 (38%), Gaps = 12/104 (11%)

Query: 721 KYIEKNTNAVQDQK-KMFDEAKDGIARAHKLVQTRVDPLISISSMESCACCGKLLFTGQG 779
           KYI+KN  A QD      DE ++     +K        +   + M S  CCG    TG G
Sbjct: 685 KYIKKNNTAEQDTSYSSLDELRESWWNTNKKYIWLA--MKHGAGMNSTTCCGDGSVTGSG 742

Query: 780 V---------VFPCKHGFHTECIKQMFQKLNIKDVPITKNCPLC 814
                     + P    F  E ++   ++   K  P+ +NC  C
Sbjct: 743 SSCDDIPTIDLIPQYLRFLQEWVEHFCKQRQEKVKPVIENCKSC 786



>EAY10465.1 on XP_804139   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 793

 Score = 28.1 bits (61), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 506 PNEVINAIYTSPKISQKEFAPMISSPSAIERIYELKNGKLKTSWLRAA-FVLQ 557
           P  + +A+    K S     PM  +P A++ + E    K  TSW     FV+Q
Sbjct: 713 PQTIASAVSGPEKNSAAPAVPMTLNPHAVKEVSEGGAAKKNTSWTEGVQFVVQ 765




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10470.1 ankyrin repeat protein, putative [Trichomonas
vaginalis G3]
         (455 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_821102   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.9  
XP_819344   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   4.9  
XP_802157   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   8.1  

>EAY10470.1 on XP_821102   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 929

 Score = 26.9 bits (58), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 7/85 (8%)

Query: 371 GWTPLHYAARNIRKETAEFLISNGADINAKDKDGWTPLHYAAIDNNEETAEFLI----SN 426
           G TPL   + N R      L+  G+ ++  +   W   H    +NNE  A+FL       
Sbjct: 150 GVTPLVGKSANARDWG--LLLVKGS-VSGGNGITWNETHAVTFENNEYAAKFLTQLVSGG 206

Query: 427 GADINAKDKDGWTPHQITTRNNRNI 451
           G+ I  KD     P Q T   N ++
Sbjct: 207 GSGIKTKDGTLMFPMQATKNENTSL 231




 Score = 26.2 bits (56), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 5/69 (7%)

Query: 305 GWTPLHYAARNIRKETAEFLISNGADINAKTKYGWTPLHYAAIDNNEETAEFL--ISNGA 362
           G TPL   + N R      L+  G+ ++      W   H    +NNE  A+FL  + +G 
Sbjct: 150 GVTPLVGKSANARDWG--LLLVKGS-VSGGNGITWNETHAVTFENNEYAAKFLTQLVSGG 206

Query: 363 DINAKDKDG 371
               K KDG
Sbjct: 207 GSGIKTKDG 215



>EAY10470.1 on XP_819344   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 861

 Score = 26.2 bits (56), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 54/129 (41%), Gaps = 18/129 (13%)

Query: 17  LYRLKTNDETKLNAIYKKIKQKLIDSYHISPGEFVNKISQVSIYNNRYMKSYLAIAKQIV 76
           LY++  N+E +L A+Y+K   K +D+   SPG  V+ I    +   + +K  LA  K+ V
Sbjct: 421 LYKIGNNNEEELIALYEK---KKVDAEKPSPG-MVSVILSAQL---QRVKDVLATWKK-V 472

Query: 77  DEYHLNQVNEINKVFNYLFYKEYSIVLDANG------TKFFNDFEVSHYTAEIHEQKTIH 130
           DE    +V+ +   FN          +  NG        F ND     Y       K   
Sbjct: 473 DE----RVSNLCLSFNVEKDTSSGTAMPTNGLVGFLSGNFSNDTWRDEYLGVNATVKKKE 528

Query: 131 RSIMDDDKI 139
           R+  D D +
Sbjct: 529 RATEDADGV 537



>EAY10470.1 on XP_802157   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 312

 Score = 25.0 bits (53), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 16/51 (31%), Positives = 20/51 (39%), Gaps = 4/51 (7%)

Query: 405 WTPLHYAAIDNNEETAEFLI----SNGADINAKDKDGWTPHQITTRNNRNI 451
           W   H     N+E  AEFL       G+ I  KD     P Q T   N ++
Sbjct: 219 WNETHAVTFGNDEYAAEFLTQLVSGGGSGIKTKDGTLMFPMQATKNENTSL 269




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10471.1 hypothetical protein TVAG_483810 [Trichomonas
vaginalis G3]
         (117 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001608668  variant erythrocyte surface antigen-1, alpha subun...    25   1.7  
XP_819216   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   2.5  
XP_001611901  variant erythrocyte surface antigen-1, alpha subun...    23   4.3  
XP_812517   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   4.5  
XP_806961   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   5.0  
XP_804884   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   5.6  
XP_001350796  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   6.6  
XP_803373  VSG  (Establishment)  [Trypanosoma brucei]                  23   7.2  
XP_652967  Vps35  (Establishment)  [Entamoeba histolytica]             23   8.3  
AAW71454  Histo-aspartic protease  (Proteases)  [Plasmodium falc...    23   8.8  
AAW71455  Histo-aspartic protease  (Proteases)  [Plasmodium falc...    23   8.8  
AAW71456  Histo-aspartic protease  (Proteases)  [Plasmodium falc...    23   8.8  
AAW71457  Histo-aspartic protease  (Proteases)  [Plasmodium falc...    23   8.8  
AAW71458  Histo-aspartic protease  (Proteases)  [Plasmodium falc...    23   8.8  

>EAY10471.1 on XP_001608668  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1337

 Score = 24.6 bits (52), Expect = 1.7,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 22/34 (64%)

Query: 53  KQRKEELDTKIAEYEAKIKELDDTKERYNQLLRT 86
           K + E  + ++A+ E K+K L++ K+  N+L+ +
Sbjct: 758 KAKTEGDNVRMAKLEKKMKALENAKDALNKLMTS 791



>EAY10471.1 on XP_819216   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 482

 Score = 24.3 bits (51), Expect = 2.5,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 23/48 (47%)

Query: 14  PIMSDRDFRQMLEGVMVHRENLIKYGTPYPPEAPDSEKMKQRKEELDT 61
           PI  D D  + +   ++H  N++        ++ D+  +   KEELDT
Sbjct: 382 PISMDDDRERTVANRLLHSNNMLYLLHEKRAQSTDAIFLSPLKEELDT 429



>EAY10471.1 on XP_001611901  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1211

 Score = 23.5 bits (49), Expect = 4.3,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 5/80 (6%)

Query: 1   MKNRKQIVFKIQSPIMSDRDFRQMLEGVMVHRENLIKYGTPYPPEAPDSEKMK-----QR 55
           +KN K ++ KI   ++   + ++ LEG  +   N +K       +A +S K        +
Sbjct: 677 VKNLKALLEKIGEVVVQLGNAQEALEGKKIDGINAVKKALEGVKKALESAKGALETELGK 736

Query: 56  KEELDTKIAEYEAKIKELDD 75
           K  LD K+ E +AK+  L +
Sbjct: 737 KGGLDGKLGEAKAKLDALTN 756



>EAY10471.1 on XP_812517   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 924

 Score = 23.5 bits (49), Expect = 4.5,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 27/54 (50%)

Query: 49  SEKMKQRKEELDTKIAEYEAKIKELDDTKERYNQLLRTIYEEESRVKDEQKKRL 102
           +E   ++ E++ T +A      K  +  +E ++  L+T    E    +EQKK++
Sbjct: 106 AEAQCKKAEKVFTGVASQPLTTKTANTPEELFSDALKTTQVLEKGTSEEQKKKV 159



>EAY10471.1 on XP_806961   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 702

 Score = 23.5 bits (49), Expect = 5.0,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 22/48 (45%)

Query: 14  PIMSDRDFRQMLEGVMVHRENLIKYGTPYPPEAPDSEKMKQRKEELDT 61
           PI  D D  + +   ++H  N++        ++ D   +   KEELDT
Sbjct: 420 PISMDDDRERTVANRLLHSNNMLYLLHERRDQSTDGIFLSPLKEELDT 467



>EAY10471.1 on XP_804884   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 732

 Score = 23.1 bits (48), Expect = 5.6,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 22/48 (45%)

Query: 14  PIMSDRDFRQMLEGVMVHRENLIKYGTPYPPEAPDSEKMKQRKEELDT 61
           PI  D D  + +   ++H  N++        ++ D   +   KEELDT
Sbjct: 420 PISMDDDGERTVANRLLHSNNMLYLLHERRDQSTDGIFLSPLKEELDT 467



>EAY10471.1 on XP_001350796  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2646

 Score = 23.1 bits (48), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 9/22 (40%), Positives = 15/22 (68%)

Query: 20   DFRQMLEGVMVHRENLIKYGTP 41
            D+R +L+G  +   NL+K G+P
Sbjct: 1476 DYRDILDGKNMEVVNLLKDGSP 1497



>EAY10471.1 on XP_803373  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 499

 Score = 22.7 bits (47), Expect = 7.2,   Method: Composition-based stats.
 Identities = 10/22 (45%), Positives = 15/22 (68%)

Query: 53  KQRKEELDTKIAEYEAKIKELD 74
           +QR+E +D+K AE   K K+ D
Sbjct: 376 RQRQETIDSKEAECNTKDKDTD 397



>EAY10471.1 on XP_652967  Vps35  (Establishment)  [Entamoeba histolytica]
          Length = 757

 Score = 22.7 bits (47), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 12/44 (27%), Positives = 24/44 (54%)

Query: 54  QRKEELDTKIAEYEAKIKELDDTKERYNQLLRTIYEEESRVKDE 97
            +++ L + I      + EL +TKE  + +L  I +  S+V+D+
Sbjct: 428 SKRKTLASDIVTRCVTLNELIETKEYASNMLEVIIDLISKVQDQ 471



>EAY10471.1 on AAW71454  Histo-aspartic protease  (Proteases)  [Plasmodium
           falciparum]
          Length = 451

 Score = 22.7 bits (47), Expect = 8.8,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 23/39 (58%)

Query: 75  DTKERYNQLLRTIYEEESRVKDEQKKRLLNRSETPGNYL 113
           + +  Y++L++TI E + +   ++  +L N+  T  +YL
Sbjct: 84  NIENSYDRLMKTIKEHKLKNYIKESVKLFNKGLTKKSYL 122



>EAY10471.1 on AAW71455  Histo-aspartic protease  (Proteases)  [Plasmodium
           falciparum]
          Length = 451

 Score = 22.7 bits (47), Expect = 8.8,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 23/39 (58%)

Query: 75  DTKERYNQLLRTIYEEESRVKDEQKKRLLNRSETPGNYL 113
           + +  Y++L++TI E + +   ++  +L N+  T  +YL
Sbjct: 84  NIENSYDRLMKTIKEHKLKNYIKESVKLFNKGLTKKSYL 122



>EAY10471.1 on AAW71456  Histo-aspartic protease  (Proteases)  [Plasmodium
           falciparum]
          Length = 451

 Score = 22.7 bits (47), Expect = 8.8,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 23/39 (58%)

Query: 75  DTKERYNQLLRTIYEEESRVKDEQKKRLLNRSETPGNYL 113
           + +  Y++L++TI E + +   ++  +L N+  T  +YL
Sbjct: 84  NIENSYDRLMKTIKEHKLKNYIKESVKLFNKGLTKKSYL 122



>EAY10471.1 on AAW71457  Histo-aspartic protease  (Proteases)  [Plasmodium
           falciparum]
          Length = 451

 Score = 22.7 bits (47), Expect = 8.8,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 23/39 (58%)

Query: 75  DTKERYNQLLRTIYEEESRVKDEQKKRLLNRSETPGNYL 113
           + +  Y++L++TI E + +   ++  +L N+  T  +YL
Sbjct: 84  NIENSYDRLMKTIKEHKLKNYIKESVKLFNKGLTKKSYL 122



>EAY10471.1 on AAW71458  Histo-aspartic protease  (Proteases)  [Plasmodium
           falciparum]
          Length = 451

 Score = 22.7 bits (47), Expect = 8.8,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 23/39 (58%)

Query: 75  DTKERYNQLLRTIYEEESRVKDEQKKRLLNRSETPGNYL 113
           + +  Y++L++TI E + +   ++  +L N+  T  +YL
Sbjct: 84  NIENSYDRLMKTIKEHKLKNYIKESVKLFNKGLTKKSYL 122




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10475.1 hypothetical protein TVAG_483860 [Trichomonas
vaginalis G3]
         (135 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAA83031  Hemolysin  (Invasion)  [Cryptosporidium parvum]              23   6.6  

>EAY10475.1 on AAA83031  Hemolysin  (Invasion)  [Cryptosporidium parvum]
          Length = 229

 Score = 23.1 bits (48), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 12/48 (25%), Positives = 24/48 (50%)

Query: 6  NLSQEDLDHAKKVFKNEYNTSHNNDTLAVVKKINQLKEMQQLFAKESP 53
          N  +  ++     F  EY T++ ++   + + IN L + +QL+   SP
Sbjct: 40 NFGENIINMGAPSFIPEYPTAYYSNPEVMNQGINSLVDTKQLYDYSSP 87




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10476.1 Clan MC, family M14, Zinc
carboxypeptidase-like metallopeptidase [Trichomonas vaginalis G3]
         (578 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_819012   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   7.6  

>EAY10476.1 on XP_819012   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 918

 Score = 25.8 bits (55), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 3/35 (8%)

Query: 310 IVPMIGVDGVVEGSYRVSLMGHDLNRMWTNPNPVL 344
           +V  + +D V EG   + LMG  +N    N NPVL
Sbjct: 571 LVATVSIDKVPEGDTSIPLMGVKVN---DNKNPVL 602




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10483.1 hypothetical protein TVAG_483940 [Trichomonas
vaginalis G3]
         (384 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001350415  PfEMP1  (Establishment)  [Plasmodium falciparum]         29   0.54 

>EAY10483.1 on XP_001350415  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3056

 Score = 28.9 bits (63), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 7/51 (13%)

Query: 71   CFILEHVLIGRDEFINYLEK-----CEYKFDKFLYRFK-DCFFFKTLDDVD 115
            C  ++H+ I + +FI +LE+     CE K+ K+    K +C   K  DD D
Sbjct: 1777 CMGVQHIGIAKPQFIRWLEEWTNEFCE-KYTKYFEDMKSNCNLRKGADDCD 1826




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10489.1 hypothetical protein TVAG_484000 [Trichomonas
vaginalis G3]
         (349 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_808396   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   1.1  
XP_816852   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.5  
XP_001350936  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   1.5  
XP_816855   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.9  
XP_820455   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.9  
XP_820456   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.9  
XP_809659   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   6.5  
CAA54438  CP1  (Cysteine protease)  [Trichomonas vaginalis]            25   6.8  
AAV98582  CP4  (Cysteine protease)  [Trichomonas vaginalis]            25   6.9  
XP_811916   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   7.2  
AAX07966  alpha-19 giardin  (Others)  [Giardia duodenalis]             25   8.5  

>EAY10489.1 on XP_808396   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 786

 Score = 27.7 bits (60), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 1/46 (2%)

Query: 120 AAKLLSKNGDLNKIPQQNQMVRQAIEVTHLTEQINAIE-QLKNGAQ 164
           A+ LL  +G+L+ + ++     +AI ++HL E++N I+  LK  AQ
Sbjct: 431 ASTLLYSDGNLHLLRRRGDYEGRAISLSHLAEELNKIKFVLKTWAQ 476



>EAY10489.1 on XP_816852   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 739

 Score = 27.3 bits (59), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 1/46 (2%)

Query: 120 AAKLLSKNGDLNKIPQQNQMVRQAIEVTHLTEQINAIEQ-LKNGAQ 164
           A+ LL  +G+L+ + Q+       I ++HL E+++ I+  LK  AQ
Sbjct: 435 ASGLLYSDGNLHLLQQRGSSEHSVISLSHLAEELSTIKSVLKTWAQ 480



>EAY10489.1 on XP_001350936  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2163

 Score = 27.3 bits (59), Expect = 1.5,   Method: Composition-based stats.
 Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 3/64 (4%)

Query: 228 FKKFQKSYNTATDNIESLPFHALLNILKNESTKSTVNNLNDVIDSLHKECKVIEYRLEKM 287
           FKK   +  T  D   +L +  +L+ LK+EST+   +  N V     KE K +   L++ 
Sbjct: 663 FKKQNIAAETQCDPGVTLQWVLILDFLKDESTE---DKENKVSAEEAKEIKHLRQMLQQA 719

Query: 288 GVDD 291
           GVDD
Sbjct: 720 GVDD 723



>EAY10489.1 on XP_816855   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 754

 Score = 26.9 bits (58), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 1/46 (2%)

Query: 120 AAKLLSKNGDLNKIPQQNQMVRQAIEVTHLTEQINAIEQ-LKNGAQ 164
           A+ LL  +G+L+ + Q+       I ++HL E+++ I+  LK  AQ
Sbjct: 397 ASGLLYSDGNLHLLQQRGSSEHSVISLSHLAEELSTIKSVLKTWAQ 442



>EAY10489.1 on XP_820455   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 769

 Score = 26.9 bits (58), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 12/40 (30%), Positives = 25/40 (62%)

Query: 120 AAKLLSKNGDLNKIPQQNQMVRQAIEVTHLTEQINAIEQL 159
           A+ L+  +G+L+ + Q+       I ++ LTE+++AIE +
Sbjct: 432 ASSLMYSDGNLHLLQQRGSSEHSVISLSRLTEELSAIESV 471



>EAY10489.1 on XP_820456   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 769

 Score = 26.9 bits (58), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 12/40 (30%), Positives = 25/40 (62%)

Query: 120 AAKLLSKNGDLNKIPQQNQMVRQAIEVTHLTEQINAIEQL 159
           A+ L+  +G+L+ + Q+       I ++ LTE+++AIE +
Sbjct: 432 ASSLMYSDGNLHLLQQRGSSEHSVISLSRLTEELSAIESV 471



>EAY10489.1 on XP_809659   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 796

 Score = 25.4 bits (54), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 13/40 (32%), Positives = 25/40 (62%)

Query: 120 AAKLLSKNGDLNKIPQQNQMVRQAIEVTHLTEQINAIEQL 159
           A+ LL  +G+L+ + Q++     AI ++ LTE++  IE +
Sbjct: 441 ASSLLYSDGNLHLLQQRDNDKGSAISLSRLTEELKKIESV 480



>EAY10489.1 on CAA54438  CP1  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 255

 Score = 25.0 bits (53), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 2/46 (4%)

Query: 56 ILNNTHLIEENFRANTRYQKAKQQLSNMQKA--NEQLDIRIQKAQQ 99
           L+N  L++E+ RAN  +  A  +L+++  A  N  L  R+ KA++
Sbjct: 21 WLSNKRLVQEHNRANLGFTVALNKLAHLTPAEYNSLLGFRMNKAER 66



>EAY10489.1 on AAV98582  CP4  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 255

 Score = 25.0 bits (53), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 2/46 (4%)

Query: 56 ILNNTHLIEENFRANTRYQKAKQQLSNMQKA--NEQLDIRIQKAQQ 99
           L+N  L++E+ RAN  +  A  +L+++  A  N  L  R+ KA++
Sbjct: 34 WLSNKRLVQEHNRANLGFTVALNKLAHLTPAEYNSLLGFRMNKAER 79



>EAY10489.1 on XP_811916   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 685

 Score = 25.0 bits (53), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 15/54 (27%), Positives = 33/54 (61%), Gaps = 1/54 (1%)

Query: 106 GEAKLRNVALLSPTAAKLLSKNGDLNKIPQQNQMVRQAIEVTHLTEQINAIEQL 159
           G+  + N A    T++ LL  +G+L+ + +++     AI ++ +TE+++AIE +
Sbjct: 387 GQVGMDNAANWEFTSS-LLYSDGNLHLLQRRDTDKGSAISLSRMTEELSAIESV 439



>EAY10489.1 on AAX07966  alpha-19 giardin  (Others)  [Giardia duodenalis]
          Length = 255

 Score = 24.6 bits (52), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 12/49 (24%)

Query: 21  LQLLRTALNGINARNTELQSMPPLQRLDLTLNQPNILNNTHLIEENFRA 69
           L LLR  LNG            PL++L L+  +P++   T LI E+ + 
Sbjct: 85  LSLLREKLNG------------PLEKLILSSFKPDVTLRTELIRESLQG 121




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10490.1 hypothetical protein TVAG_484010 [Trichomonas
vaginalis G3]
         (374 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_814919   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.18 
XP_815173   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.24 
XP_804171   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   4.2  
XP_802171   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   6.7  
P09194  GPI-PLC  (Others)  [Trypanosoma brucei]                        25   6.9  
XP_816532   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   9.2  
XP_818220   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   9.7  
XP_819563   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   9.9  

>EAY10490.1 on XP_814919   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 854

 Score = 30.4 bits (67), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)

Query: 257 AKETFPEINWEVWPD--KFNTMLQAIRSWNQVKFIFTPTGSNLDNAIFM 303
           A ET+  +  EV  D  K +T+L+++ +WN V     PTG    N +F+
Sbjct: 214 APETWQSLVAEVTKDDWKAHTVLESVDNWNHVGVANLPTGITRGNKVFL 262



>EAY10490.1 on XP_815173   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 661

 Score = 30.0 bits (66), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)

Query: 257 AKETFPEINWEVWPD--KFNTMLQAIRSWNQVKFIFTPTGSNLDNAIFM 303
           A ET+  +  EV  D  K +T+L+++ +WN V     PTG    N +F+
Sbjct: 149 APETWQSLVAEVTKDDWKAHTVLESVDNWNHVGVAKLPTGITRGNKVFL 197



>EAY10490.1 on XP_804171   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 787

 Score = 26.2 bits (56), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 7/50 (14%)

Query: 8   SYIEEMIPRNQTAVFTRTLTNVDKNHIISYRQIYSRIDRSHNRWMLDLND 57
           S I E  P N T + T TL N + NH +        +  SHN+  +   D
Sbjct: 561 SLIIEEAPSNNTPLLTATLANNNSNHTMG-------VSYSHNKLGIMFED 603



>EAY10490.1 on XP_802171   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 274

 Score = 25.0 bits (53), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 12/28 (42%), Positives = 15/28 (53%)

Query: 8   SYIEEMIPRNQTAVFTRTLTNVDKNHII 35
           S I E  P N T + T TL N + NH +
Sbjct: 92  SVIIEEAPSNNTPLLTATLANNNSNHTM 119



>EAY10490.1 on P09194  GPI-PLC  (Others)  [Trypanosoma brucei]
          Length = 358

 Score = 25.0 bits (53), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 5/72 (6%)

Query: 144 PLIMLPQEVFDNAYLVISGHPTWCLDSLKLLGFNTSHTIILPKFSDYIFAKE---LHTFV 200
           PL  + ++V D      S +    LD L   GFN SHT  + +F + + A E   + T V
Sbjct: 120 PLQEVLKDVKDFLTTPASANEFVILDFLHFYGFNESHT--MKRFVEELQALEEFYIPTTV 177

Query: 201 GNRSFLCHLGQS 212
              + LC+L QS
Sbjct: 178 SLTTPLCNLWQS 189



>EAY10490.1 on XP_816532   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 725

 Score = 25.0 bits (53), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 5/53 (9%)

Query: 255 NTAKETFPEINWEVWPDKFNTMLQAIRSWNQVKFIFTPTGSNLDNAIFMQPKS 307
           +T  E   E  W     K +T+L      N+V  +F PT +   N +F+   S
Sbjct: 158 STLVEKVSESTW-----KAHTVLDTTDGTNRVGDVFNPTATTKGNKVFLLATS 205



>EAY10490.1 on XP_818220   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 768

 Score = 25.0 bits (53), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 6/51 (11%)

Query: 257 AKETFP----EINWEVWPDKFNTMLQAIRSWNQVKFIFTPTGSNLDNAIFM 303
           A E++P    E+N   W  + +T+L +    N++ +++ PT    DN +F+
Sbjct: 146 AAESWPSIVAEVNASTW--RAHTVLGSRNDDNRLCYLYGPTAVAKDNKVFL 194



>EAY10490.1 on XP_819563   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 720

 Score = 24.6 bits (52), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 5/53 (9%)

Query: 255 NTAKETFPEINWEVWPDKFNTMLQAIRSWNQVKFIFTPTGSNLDNAIFMQPKS 307
           +T  E   E  W     K +T+L      N+V  +F PT +   N +F+   S
Sbjct: 159 STLVEKVSESTW-----KAHTVLDTTDGTNRVGDVFNPTATTKGNKVFLLATS 206




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10493.1 ADP-ribosylation factor-like protein 3,
putative [Trichomonas vaginalis G3]
         (170 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BAD34969  Rab7B  (Establishment)  [Entamoeba histolytica]              39   3e-05
BAB40673  Rab5  (Establishment)  [Entamoeba histolytica]               31   0.025
AAB86482  RabA  (Invasion)  [Entamoeba histolytica]                    30   0.043
XP_652776  Rab11B  (Establishment)  [Entamoeba histolytica]            30   0.059
XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 26   1.6  
AAL38219  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   24   5.5  
AAL38222  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   24   5.5  
AAL38218  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   24   5.6  
AAL38221  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   24   5.7  
AAL38220  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   24   5.7  
XP_807074   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   8.5  

>EAY10493.1 on BAD34969  Rab7B  (Establishment)  [Entamoeba histolytica]
          Length = 207

 Score = 39.3 bits (90), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 61/128 (47%), Gaps = 18/128 (14%)

Query: 11  KLLFLGLDNAGKTTIL-KALSKESPDNVAPTRG--FNVKQLKTGNYEFN--IWDVGGQKA 65
           K++ LG    GKT++L + ++K+       T G  F  K +   + + +  IWD  G + 
Sbjct: 12  KIIILGDSGVGKTSLLNQYVTKQFSSQYKATIGADFMTKDITINDQQISLQIWDTAGHER 71

Query: 66  LRSYWASYYDKINAIVWVIDSADTHRMAETGFELAELLQEEKLAG--------VPVLILA 117
             S+  ++Y   +  + V D      +AE+ FE  E+ ++E ++G         P +++A
Sbjct: 72  FASFGTAFYRGADVCMLVCDVT----VAES-FEHLEVWRKEFISGGNPSDPESFPYVVIA 126

Query: 118 NKQDLATA 125
           NK D   A
Sbjct: 127 NKNDCEPA 134



>EAY10493.1 on BAB40673  Rab5  (Establishment)  [Entamoeba histolytica]
          Length = 195

 Score = 30.8 bits (68), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 5/80 (6%)

Query: 11 KLLFLGLDNAGKTTI-LKALSKESPDNVAPTRG--FNVKQLKTG--NYEFNIWDVGGQKA 65
          K++ LG  + GK++I L+    E  +    T G  F  K L       +F IWD  GQ+ 
Sbjct: 10 KIVLLGDSSVGKSSIVLRVCKDEYKEFQENTIGAAFLTKTLIVDGETIKFEIWDTAGQER 69

Query: 66 LRSYWASYYDKINAIVWVID 85
            S    YY   NA + V D
Sbjct: 70 YHSLTPMYYRGSNAALVVYD 89



>EAY10493.1 on AAB86482  RabA  (Invasion)  [Entamoeba histolytica]
          Length = 219

 Score = 30.0 bits (66), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 3/72 (4%)

Query: 53  YEFNIWDVGGQKALRSYWASYYDKINAIVWVIDSADTHRMAETGFELAELLQEEKLAGV- 111
           Y+  +WD  GQ+   S    Y+  I  ++ V    D     +   +  +L      +G  
Sbjct: 74  YQLQLWDTAGQEKYHSLVRLYFKDIKGVLLVF-QIDRQESFDHCKDWLDLFYSSISSGFT 132

Query: 112 -PVLILANKQDL 122
            PVL++ NK DL
Sbjct: 133 PPVLLVGNKCDL 144



>EAY10493.1 on XP_652776  Rab11B  (Establishment)  [Entamoeba histolytica]
          Length = 211

 Score = 29.6 bits (65), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 52/129 (40%), Gaps = 22/129 (17%)

Query: 11  KLLFLGLDNAGKTTILKALSKES--PDNVA------PTRGFNVKQLKTGNYEFNIWDVGG 62
           K++ +G    GK+ +L   ++    PD  +       TR  N       N    IWD  G
Sbjct: 12  KIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSINYCD---KNIRAQIWDTAG 68

Query: 63  QKALRSYWASYYDKINAIVWVIDSADTHRMAETGFE-----LAELLQEEKLAGVPVLILA 117
           Q+  R+   +YY      + V D        +T FE     LAE L E     V  +++ 
Sbjct: 69  QERYRAITNAYYRGALGALVVYDIT-----KKTSFESVEKWLAE-LHENADKKVVQMVIG 122

Query: 118 NKQDLATAK 126
           NK DL+  +
Sbjct: 123 NKCDLSQTR 131



>EAY10493.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 25.8 bits (55), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 12/85 (14%)

Query: 81   VWVIDSADTHRMAETG-------FELAELLQEEKLAGVPVLILANKQDLATAKNPDEIAI 133
            ++VID    H +            ++ E++ + K      +  ANK D    KN D I I
Sbjct: 1483 IYVIDLFIKHEIINPSDGKNFDIIKVKEMINKTKQVSNEAMEYANKMD---EKNKDIIKI 1539

Query: 134  ELELHNIRNRNWQIQGCSAVTSEGL 158
            E EL+N+ N N  I+    V  E +
Sbjct: 1540 ENELYNLINNN--IRSLKGVKYEKV 1562



>EAY10493.1 on AAL38219  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2969

 Score = 24.3 bits (51), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 10/19 (52%), Positives = 13/19 (68%)

Query: 62   GQKALRSYWASYYDKINAI 80
             +K L+   +SYYDKIN I
Sbjct: 2104 KEKLLKETISSYYDKINNI 2122



>EAY10493.1 on AAL38222  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2976

 Score = 24.3 bits (51), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 10/19 (52%), Positives = 13/19 (68%)

Query: 62   GQKALRSYWASYYDKINAI 80
             +K L+   +SYYDKIN I
Sbjct: 2115 KEKLLKETISSYYDKINNI 2133



>EAY10493.1 on AAL38218  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2977

 Score = 24.3 bits (51), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 10/19 (52%), Positives = 13/19 (68%)

Query: 62   GQKALRSYWASYYDKINAI 80
             +K L+   +SYYDKIN I
Sbjct: 2112 KEKLLKETISSYYDKINNI 2130



>EAY10493.1 on AAL38221  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2965

 Score = 24.3 bits (51), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 10/19 (52%), Positives = 13/19 (68%)

Query: 62   GQKALRSYWASYYDKINAI 80
             +K L+   +SYYDKIN I
Sbjct: 2108 KEKLLKETISSYYDKINNI 2126



>EAY10493.1 on AAL38220  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2957

 Score = 24.3 bits (51), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 10/19 (52%), Positives = 13/19 (68%)

Query: 62   GQKALRSYWASYYDKINAI 80
             +K L+   +SYYDKIN I
Sbjct: 2102 KEKLLKETISSYYDKINNI 2120



>EAY10493.1 on XP_807074   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 822

 Score = 23.5 bits (49), Expect = 8.5,   Method: Composition-based stats.
 Identities = 9/16 (56%), Positives = 11/16 (68%)

Query: 60  VGGQKALRSYWASYYD 75
           VGG  + RSYW S+ D
Sbjct: 142 VGGYNSSRSYWTSHGD 157




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10494.1 hypothetical protein TVAG_484050 [Trichomonas
vaginalis G3]
         (134 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAD32093  cpABC  (Establishment)  [Cryptosporidium parvum]             26   0.63 
XP_807454   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   4.3  
XP_812956   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   4.3  
XP_804223   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   5.3  
XP_806744   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   7.9  

>EAY10494.1 on AAD32093  cpABC  (Establishment)  [Cryptosporidium parvum]
          Length = 255

 Score = 26.2 bits (56), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 16/65 (24%)

Query: 36  KPEEI-----TTWLELFKDFDETIKA---GLTYDGVH----YHVHRFYDGILYGRADPNT 83
           KPE +     +T+  +FK F   I      L YD +     + +H    G+LY   DPN 
Sbjct: 102 KPEAVNSIQFSTFKVIFKTFYLRINILLFKLIYDIIQMCRPWQIH----GVLYWIGDPNG 157

Query: 84  KKTNG 88
            KT+G
Sbjct: 158 SKTSG 162



>EAY10494.1 on XP_807454   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 825

 Score = 23.9 bits (50), Expect = 4.3,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 42/109 (38%), Gaps = 27/109 (24%)

Query: 43  WLELFKDFDETIKAGLTYDGVHYHV---------HRFYDGILYGRAD-PNTKKTN----G 88
           W  + KD ++T K+G    G  Y V           + DG L G  + P T +T     G
Sbjct: 618 WETMLKDEEKTTKSGTWKAGKEYQVALMLQGKKRSVYVDGELLGEEEVPLTGETPLEPFG 677

Query: 89  FCL----------LKSPRAGDKKPIVL---LFTFDLPATTARLVPAANK 124
           FC             SP    KKP V    +F ++ P  +  ++   ++
Sbjct: 678 FCFGACGEDDDGEESSPEEIGKKPSVTVTNVFLYNRPLNSTEMIAIKDR 726



>EAY10494.1 on XP_812956   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1005

 Score = 23.9 bits (50), Expect = 4.3,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 21  LFTEDGKQLLATTEVKPEEITT 42
            + EDGK++  T + KPE   T
Sbjct: 922 FYFEDGKEVPQTVDTKPENTNT 943



>EAY10494.1 on XP_804223   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 746

 Score = 23.5 bits (49), Expect = 5.3,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 21  LFTEDGKQLLATTEVKPEEITT 42
            + EDGK++  T + KPE   T
Sbjct: 663 FYFEDGKEVPQTVDTKPENTNT 684



>EAY10494.1 on XP_806744   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 789

 Score = 23.1 bits (48), Expect = 7.9,   Method: Composition-based stats.
 Identities = 9/19 (47%), Positives = 12/19 (63%)

Query: 24  EDGKQLLATTEVKPEEITT 42
           EDGK++  T + KPE   T
Sbjct: 709 EDGKEVPQTVDTKPENTNT 727




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10501.1 alcohol dehydrogenase, iron-containing family
protein [Trichomonas vaginalis G3]
         (393 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_808758   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   0.39 
XP_806299   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   1.5  
XP_815749   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.1  
XP_805670   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   4.7  
XP_805195   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   5.2  
XP_805196   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   7.1  

>EAY10501.1 on XP_808758   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 823

 Score = 29.3 bits (64), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 39/104 (37%), Gaps = 23/104 (22%)

Query: 239 ELHERLITAASFAQNHIFTYAKRPN---WECHLVAQPLTPMYGIDH---------AATLS 286
           E  ERL   A  A  +   Y    N   W  H   QP+T ++G  H          +T +
Sbjct: 307 EGDERLFMMAHCAGGYYDVYMSTENGDNWYGHF--QPITRVWGNSHNRSGDGVQSGSTTA 364

Query: 287 IV---------APVLYEKVKKGRIQTMARAAERVFDVRSGTDEE 321
           I+         APV      KGR+        RV+DV   + EE
Sbjct: 365 IIEEKKVMLITAPVYANDNGKGRLHLWVTDKARVYDVGPVSREE 408



>EAY10501.1 on XP_806299   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1047

 Score = 27.7 bits (60), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 25/94 (26%), Positives = 35/94 (37%), Gaps = 23/94 (24%)

Query: 242 ERLITAASFAQNHIFTYAKRPN---WECHLVAQPLTPMYGIDHAAT-------------- 284
           ERL   A  A  +   Y    N   W  H+  +P+T ++G  H  T              
Sbjct: 310 ERLFMMAHCAGGYYDVYMSTENGYNWNGHV--KPITRVWGNTHNRTGDGVQSGSTTAIIK 367

Query: 285 ----LSIVAPVLYEKVKKGRIQTMARAAERVFDV 314
               + I APV  +   KGR+        RV+DV
Sbjct: 368 RKKVMLITAPVYPKDNGKGRLHLWVTDKARVYDV 401



>EAY10501.1 on XP_815749   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1053

 Score = 26.9 bits (58), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 20/70 (28%)

Query: 263 NWECHLVAQPLTPMYGIDHAAT------------------LSIVAPVLYEKVKKGRIQTM 304
           NW  H+  +P+T ++G  H  +                  + I APV  +  +KGR+   
Sbjct: 336 NWNGHV--KPITRVWGNSHNRSGHGVQSGFTTAIIEEKKVMLITAPVYAKDNEKGRLHLW 393

Query: 305 ARAAERVFDV 314
                RV+DV
Sbjct: 394 VTDKARVYDV 403



>EAY10501.1 on XP_805670   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 246

 Score = 25.8 bits (55), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 98  SVIDATKFIAA-AACLDEFVVPWDIISKGAYAKTAVPFGTVLTIPATGSEWNN 149
           S++ A   IAA AAC  +F  P D   K ++   AV   +  + PA  +E NN
Sbjct: 130 SLVSAGGVIAAFAACHMDFEKPTDASLKPSFGVVAVYVNSARSWPALVAEVNN 182



>EAY10501.1 on XP_805195   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 769

 Score = 25.8 bits (55), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 98  SVIDATKFIAA-AACLDEFVVPWDIISKGAYAKTAVPFGTVLTIPATGSEWNN 149
           S++ A   IAA AAC  +F  P D   K ++   AV   +  + PA  +E NN
Sbjct: 130 SLVSAGGVIAAFAACHMDFEKPTDASLKPSFGVVAVYVNSARSWPALVAEVNN 182



>EAY10501.1 on XP_805196   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 731

 Score = 25.4 bits (54), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 98  SVIDATKFIAA-AACLDEFVVPWDIISKGAYAKTAVPFGTVLTIPATGSEWNN 149
           S++ A   IAA AAC  +F  P D   K ++   AV   +  + PA  +E NN
Sbjct: 92  SLVSAGGVIAAFAACHMDFEKPTDASLKPSFGVVAVYVNSARSWPALVAEVNN 144




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10503.1 3'5'-cyclic nucleotide phosphodiesterase
family protein [Trichomonas vaginalis G3]
         (1102 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_828094  VSG  (Establishment)  [Trypanosoma brucei]                  28   3.7  

>EAY10503.1 on XP_828094  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 483

 Score = 27.7 bits (60), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 12/28 (42%), Positives = 16/28 (57%)

Query: 918 NKTHLYFVDNNYPMETYHCKVASKIIDE 945
           NK   +  DN  P  TY  KVA K+I++
Sbjct: 132 NKPKTWLADNPQPQGTYAKKVAHKLIND 159




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10504.1 hypothetical protein TVAG_484150 [Trichomonas
vaginalis G3]
         (191 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]                 25   4.8  

>EAY10504.1 on XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]
          Length = 2112

 Score = 24.6 bits (52), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 18/79 (22%), Positives = 32/79 (40%), Gaps = 13/79 (16%)

Query: 31  ITLFVRHKNRLGNTGNAKIIVGDATNLSAVENAVKGMDVVY-----------INLAGDLE 79
           +  F RH N   +     I+  D    S  E  ++ + ++Y           +NLA   E
Sbjct: 398 LKTFTRHPNNRVDAPKVTILFTDGNETSKKEKDIRDVGLLYRKENVKLIVVGVNLA--TE 455

Query: 80  KMGKIIVKAMKNQGVKRVV 98
           K  K++    +N+   RV+
Sbjct: 456 KSLKLLAGCTENEECLRVI 474




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10514.1 IQ calmodulin-binding motif family protein
[Trichomonas vaginalis G3]
         (988 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10524.1 hypothetical protein TVAG_184260 [Trichomonas
vaginalis G3]
         (492 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001347690  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   3.6  
XP_818382   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   7.7  

>EAY10524.1 on XP_001347690  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2215

 Score = 26.9 bits (58), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 12/52 (23%)

Query: 10   LHRAVEENR-LNDFKVLLNLGFDINEEGQNGRTPLIVSVINQYQDFIDYLLD 60
            +++A+E  + L +F+    L  D NE+ +NG           YQD ID LLD
Sbjct: 1592 VNKAIEPCKGLENFEKSCGLHGDANEQNKNG-----------YQDAIDCLLD 1632



>EAY10524.1 on XP_818382   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 890

 Score = 25.8 bits (55), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 9/34 (26%), Positives = 18/34 (52%)

Query: 389 EAVQRNPVAHYIKSIGGRDYKWEQEYEIEITNYV 422
           E  + N ++H+   +GG     E+E  + +TN +
Sbjct: 634 ETTESNEISHFYIGVGGGSAGSEEEVSVTVTNVL 667




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10535.1 Dynein heavy chain family protein
[Trichomonas vaginalis G3]
         (4008 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_819383   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   4.0  
AAG32024  MIC10  (Others)  [Toxoplasma gondii]                         28   8.9  

>EAY10535.1 on XP_819383   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 753

 Score = 29.6 bits (65), Expect = 4.0,   Method: Composition-based stats.
 Identities = 36/135 (26%), Positives = 55/135 (40%), Gaps = 19/135 (14%)

Query: 2793 KDAVEPYFQRPDFSEKVMDNAAPSMKTIYLWLK------AVIEYSNNLEEITNLKVKLSN 2846
            K  V  Y QR +FS K  +NA P    +YLW+       +V  +  +  E   L+  L  
Sbjct: 404  KRKVMLYTQRGNFSGKQRENANP----LYLWVTDNNRSFSVGPFGMDNAEKEKLESALLY 459

Query: 2847 NQMEFDEKKKSHAEENDRMSSMEKQLEEEKMALRSSLQSKEQMEIKFENIKNRQEAINAI 2906
            +       ++    E   MS    +L EE   + S L +  Q +I F  +      + A+
Sbjct: 460  SDGSLHLLQRRGNGEGSVMSL--SRLTEELSTINSVLSTWSQKDIFFSRLSIPTAGLVAV 517

Query: 2907 LSDM-------DEFL 2914
            LSD        DE+L
Sbjct: 518  LSDAASDGTWNDEYL 532



>EAY10535.1 on AAG32024  MIC10  (Others)  [Toxoplasma gondii]
          Length = 198

 Score = 28.1 bits (61), Expect = 8.9,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 51/99 (51%), Gaps = 9/99 (9%)

Query: 2835 EEITNLKVKLSNNQMEFDEKKKSHAEENDRMSSMEKQLEE--EKMALRSSLQSKEQ-MEI 2891
            EE+   K K      E   K +  AE   +  ++ ++L+E  +K  LR + + +E+ ++ 
Sbjct: 83   EEVEEAKRKYHE---ELRRKAEEDAETKRKQEAVIQELKEVAKKRGLREAAEREEKRIDE 139

Query: 2892 KFENIKNRQEAINAILSDMDEFLMKWAQESNEITTQREL 2930
            +  N + RQ+ +  + S M+E LM+  ++  E   +REL
Sbjct: 140  QQANYEQRQQELRDMDSAMEERLMQQRKKDQE---EREL 175




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10537.1 hypothetical protein TVAG_184390 [Trichomonas
vaginalis G3]
         (184 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351563  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   0.72 
XP_001349031  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   2.0  
XP_001350415  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   9.3  

>EAY10537.1 on XP_001351563  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2149

 Score = 26.9 bits (58), Expect = 0.72,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 85   PPYFQEDENGWWKKIRRHLGAGAIMYGIPFQEAEENGP 122
            PP   +D + WWK+  +H+  G I   + ++E E   P
Sbjct: 1042 PPNSVKDPSSWWKENAQHIWNGMIC-ALTYKEIEVKNP 1078




 Score = 25.8 bits (55), Expect = 2.0,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 23   RFFPIDGPFRKRNCQMLPRIKEDENGWWKKIRRHLGAGAIMYGIPFQEAEENGP 76
            +FF   G     +  + P   +D + WWK+  +H+  G I   + ++E E   P
Sbjct: 1026 KFFQNSGNQSPPSGTLPPNSVKDPSSWWKENAQHIWNGMIC-ALTYKEIEVKNP 1078




 Score = 24.3 bits (51), Expect = 5.4,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 14/24 (58%)

Query: 131  PPYFQEDENGWWKKIRRHLGAGGI 154
            PP   +D + WWK+  +H+  G I
Sbjct: 1042 PPNSVKDPSSWWKENAQHIWNGMI 1065



>EAY10537.1 on XP_001349031  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2275

 Score = 25.8 bits (55), Expect = 2.0,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 79   PMPIHPPPYFQEDENGWWKKIRRHLGAGAIMYGIPFQEAE 118
            P P+  P   +     WWK+  +H+  G I   + ++E+E
Sbjct: 1147 PTPVTQPSGQKTTPKDWWKENAKHIWEGMIC-ALTYKESE 1185




 Score = 23.9 bits (50), Expect = 8.3,   Method: Composition-based stats.
 Identities = 9/30 (30%), Positives = 14/30 (46%)

Query: 125  PMPIHPPPYFQEDENGWWKKIRRHLGAGGI 154
            P P+  P   +     WWK+  +H+  G I
Sbjct: 1147 PTPVTQPSGQKTTPKDWWKENAKHIWEGMI 1176



>EAY10537.1 on XP_001350415  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3056

 Score = 23.5 bits (49), Expect = 9.3,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 5/70 (7%)

Query: 33   KRNCQMLPRIKEDENGWWKKIRRHLGAGAIMYGIP--FQEAEENGPFR--PMPIHPPPYF 88
            K+N + +    E+ N WWK I   +   A+   I    ++ ++NG F      I PP   
Sbjct: 1381 KQNGKTVGSGAENVNAWWKGIEGEMW-DAVRCAITKINKKQKKNGTFSIDECGIFPPTGN 1439

Query: 89   QEDENGWWKK 98
             ED++  W K
Sbjct: 1440 DEDQSVSWFK 1449




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10539.1 hypothetical protein TVAG_184410 [Trichomonas
vaginalis G3]
         (133 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_816181   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   1.3  
XP_813500   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   6.0  
XP_817842   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   6.8  

>EAY10539.1 on XP_816181   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 967

 Score = 25.4 bits (54), Expect = 1.3,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 2/82 (2%)

Query: 2   LRSLAFFNALLNQPIKTNGYKIDGTTLKLENEK--DYYNYENDLIDKVLSNNIKSVIITC 59
           L   A +N  L   +  +G   + T + L   K  D  N EN ++  +  N  K  I+ C
Sbjct: 588 LYHFANYNFTLVATVSIDGVPQEDTPIPLMGAKMNDAENTENSVLLGLSYNKKKKWILLC 647

Query: 60  NGWSKKELVTRGFFDTIQEVDI 81
            G + KE  +    DT  +V I
Sbjct: 648 GGENPKEHSSTWEKDTTHQVVI 669



>EAY10539.1 on XP_813500   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 898

 Score = 23.5 bits (49), Expect = 6.0,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 1/66 (1%)

Query: 2   LRSLAFFNALLNQPIKTNGYKIDGTTLKLENEKDYYNYENDLIDKVLSNNIKSVIITCNG 61
           L   A +   L   +  +G   +GTT+ L   K      N ++  +  NN K  I+ C+G
Sbjct: 568 LYHFANYKFTLVATVSIDGVPEEGTTIPLMGVK-MSGDGNSVLLGLSYNNEKKWILKCSG 626

Query: 62  WSKKEL 67
            + KEL
Sbjct: 627 GTTKEL 632



>EAY10539.1 on XP_817842   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 897

 Score = 23.1 bits (48), Expect = 6.8,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 22/47 (46%)

Query: 35  DYYNYENDLIDKVLSNNIKSVIITCNGWSKKELVTRGFFDTIQEVDI 81
           D  N EN ++  +  NN K   + C G + KEL + G   T   V I
Sbjct: 609 DDENTENSVLFGLSYNNEKKWKLLCGGATTKELSSIGEPGTTHHVVI 655




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10540.1 surface antigen Bsp, putative [Trichomonas
vaginalis G3]
         (602 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001348153  MAEBL  (Adhesin)  [Plasmodium falciparum]                27   5.4  

>EAY10540.1 on XP_001348153  MAEBL  (Adhesin)  [Plasmodium falciparum]
          Length = 2054

 Score = 26.6 bits (57), Expect = 5.4,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 20/36 (55%)

Query: 91   FKGSKILKKVSLGIGVKSITGNAFSKTSISEIDLSY 126
            F G+ I+  +   IG K I G  F + +  E+DL+Y
Sbjct: 1990 FAGAGIVLILLFVIGSKMIIGKWFEEATFDEMDLNY 2025




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10544.1 CAMK family protein kinase [Trichomonas
vaginalis G3]
         (348 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    57   5e-10
XP_803330   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.3  
XP_806744   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   6.1  
XP_818092   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   9.5  

>EAY10544.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 56.6 bits (135), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 26/111 (23%), Positives = 59/111 (53%), Gaps = 3/111 (2%)

Query: 89  MILENCPSGTLQELVQTFPLSEKRVFDILSVLVKTVSYCHANYVAHRDIKPSNIFLDDYG 148
           +I E+  +   + L  T  + + + +  +  L+K ++YCH+  + HRDIKP N+ +D   
Sbjct: 127 LIFEHVNNTDFKTLYPTLTIQDIKYY--IYQLLKAMNYCHSQGIMHRDIKPHNVMIDHEK 184

Query: 149 R-PKIGDFGLSSILSAKAVVSDKCGSTIFAAPEIFSNAPYNPFAADVFALG 198
           +  ++ D+GL+     +   S +  +  +  PE+  +  Y  ++ D++++G
Sbjct: 185 KILRLIDWGLAEFYHPEQEYSVRVATRYYKGPELLVDMRYYDYSLDIWSIG 235



>EAY10544.1 on XP_803330   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 231

 Score = 26.9 bits (58), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 15/39 (38%), Positives = 19/39 (48%)

Query: 237 LIRNMIQYEPNLRPTMDEVARDEYFMEGFESSKLVPKTV 275
           L  +    EP      DEV+R+E     FE  K VP+TV
Sbjct: 122 LTPSRTDAEPTSAEDTDEVSRNEGSEFSFEDGKEVPQTV 160



>EAY10544.1 on XP_806744   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 789

 Score = 25.4 bits (54), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 14/39 (35%), Positives = 19/39 (48%)

Query: 237 LIRNMIQYEPNLRPTMDEVARDEYFMEGFESSKLVPKTV 275
           L  +    EP      D+V+R+E     FE  K VP+TV
Sbjct: 680 LTPSRTDAEPTSAEDTDDVSRNEGSEFSFEDGKEVPQTV 718



>EAY10544.1 on XP_818092   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 884

 Score = 24.6 bits (52), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 14/68 (20%)

Query: 119 VLVKTVSYCHANYVAHRDIKPSN------IFLDDYGRPKIGDFGLSSILSAKAVVSDKCG 172
           +L+  V  C    VAH +++PS       +  D+ G   +   G   +L        K G
Sbjct: 49  LLLVLVMMCCGTGVAHAEVQPSQKKFEWKVIKDEGGGVTVESLGAPGLL--------KVG 100

Query: 173 STIFAAPE 180
           S +FA  E
Sbjct: 101 SDVFAVAE 108




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10547.1 hypothetical protein TVAG_184490 [Trichomonas
vaginalis G3]
         (100 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001611147  variant erythrocyte surface antigen-1, alpha subun...    23   3.1  
XP_804548   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   5.9  

>EAY10547.1 on XP_001611147  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1304

 Score = 23.5 bits (49), Expect = 3.1,   Method: Composition-based stats.
 Identities = 11/30 (36%), Positives = 18/30 (60%)

Query: 30   IKIEKNVTEDPHAPLLTKTSNSLLEKDTQN 59
            IK EK  T  P++    ++SN+ L + T+N
Sbjct: 1034 IKGEKGSTSTPYSSAAPQSSNTSLSRLTKN 1063



>EAY10547.1 on XP_804548   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 691

 Score = 22.7 bits (47), Expect = 5.9,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 3/35 (8%)

Query: 63 DLDALVDELSDSAEIGDDDNDLFDAVAE---DDEE 94
          D+D ++  ++D+     +DN L D VA+   DD E
Sbjct: 62 DVDGVMVAIADARYDTSNDNSLIDTVAKYSVDDGE 96




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10549.1 Tubulin/FtsZ family, C-terminal domain
containing protein [Trichomonas vaginalis G3]
         (320 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001349737  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   4.1  
ACB87908  Rh5  (Adhesin)  [Plasmodium falciparum]                      25   5.1  

>EAY10549.1 on XP_001349737  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2199

 Score = 25.8 bits (55), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 14/60 (23%)

Query: 85  KPTYSDLNSLISKSISGITSSMRFPGMLNSDM--RKLATN------------LTPFYRMH 130
           KP Y + N    K++ GIT+  RF   L      +K+  N              P+ R+H
Sbjct: 70  KPVYGNSNRYPCKNLKGITNEERFSDTLGGQCTNKKIKGNEYSTKSGKDCGACAPYRRLH 129



>EAY10549.1 on ACB87908  Rh5  (Adhesin)  [Plasmodium falciparum]
          Length = 526

 Score = 25.4 bits (54), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 17/57 (29%), Positives = 32/57 (56%)

Query: 236 VKEIFNRIDQNYSKMFDKGAYVQHYMKNDEFDLYVFDDCRYDIKDLSSQCELYETAD 292
           +K IFNRI+ +   + DK   +Q  +K + +  +  D+    I D+S++  L+ T+D
Sbjct: 417 MKHIFNRIEYHTKIINDKTKIIQDKIKLNIWRTFQKDELLKRILDMSNEYSLFITSD 473




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10553.1 hypothetical protein TVAG_184550 [Trichomonas
vaginalis G3]
         (83 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CAB37326  PfSUB2  (Proteases)  [Plasmodium falciparum]                 23   4.5  

>EAY10553.1 on CAB37326  PfSUB2  (Proteases)  [Plasmodium falciparum]
          Length = 1342

 Score = 22.7 bits (47), Expect = 4.5,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 23/45 (51%)

Query: 1   MDSISEESNKPLDLVKNDLRLQFEENDDLVRAIGEMTKQIQQKRQ 45
           MD I +E  K   L++ + ++  EEN +L    G +    + K++
Sbjct: 376 MDGIYDEEEKKESLIELNQKVNKEENTNLYDGTGTLYYGKKSKKE 420




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10556.1 hypothetical protein TVAG_184580 [Trichomonas
vaginalis G3]
         (568 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609040  variant erythrocyte surface antigen-1, alpha subun...    28   1.7  
XP_828103  VSG  (Establishment)  [Trypanosoma brucei]                  26   6.2  
XP_811242   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   7.3  
XP_819342   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   8.0  

>EAY10556.1 on XP_001609040  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1335

 Score = 28.1 bits (61), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 7/56 (12%)

Query: 348 IEEYLKERIEKLNNEILEMQNR-------VKAKNDELAEIGIQFNKEQAELAAKSK 396
           +E Y K R+EK+  E L+M          +KA  + + ++ +Q    Q  L  K K
Sbjct: 628 MEHYRKWRVEKVKGETLKMMKESDPIVKNLKALLEAIGQVVVQLGNAQEALEGKDK 683



>EAY10556.1 on XP_828103  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 472

 Score = 26.2 bits (56), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 10/28 (35%), Positives = 18/28 (64%)

Query: 344 LDQLIEEYLKERIEKLNNEILEMQNRVK 371
           LD+L+  Y + R+  LN EI  ++ ++K
Sbjct: 365 LDKLLRHYQQARVTSLNKEITNLKKQLK 392



>EAY10556.1 on XP_811242   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 909

 Score = 25.8 bits (55), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 11/35 (31%), Positives = 21/35 (60%)

Query: 489 RYGDDIYNQINQRINEEMNQVSSLKRTKSELEDDI 523
           R GD  Y+ +  R+NE++  + S  +T  EL++ +
Sbjct: 478 RNGDVPYSLVAMRLNEQLEWIKSAVKTWKELDNAL 512



>EAY10556.1 on XP_819342   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 825

 Score = 25.8 bits (55), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 10/35 (28%), Positives = 21/35 (60%)

Query: 489 RYGDDIYNQINQRINEEMNQVSSLKRTKSELEDDI 523
           R GD  Y+ +  R+ E++ ++ S  +T  EL++ +
Sbjct: 430 RNGDGPYSPVAMRLTEQLERIKSAVKTWKELDNAL 464




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10560.1 hypothetical protein TVAG_184620 [Trichomonas
vaginalis G3]
         (75 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ABV44288   PP2C2  (Establishment)  [Toxoplasma gondii]                 21   9.8  

>EAY10560.1 on ABV44288   PP2C2  (Establishment)  [Toxoplasma gondii]
          Length = 255

 Score = 21.2 bits (43), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 8/21 (38%), Positives = 14/21 (66%)

Query: 25  KDTPFSEEKMSIIRKAAERAN 45
           K +P++EE+  I+  +A R N
Sbjct: 82  KPSPYAEEESGILAASASRLN 102




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10561.1 hypothetical protein TVAG_184630 [Trichomonas
vaginalis G3]
         (61 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001611441  variant erythrocyte surface antigen-1, beta subuni...    22   2.6  
XP_817007   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   3.9  
XP_001608785  variant erythrocyte surface antigen-1, alpha subun...    22   4.6  
XP_001350935  PfEMP1  (Establishment)  [Plasmodium falciparum]         22   5.4  

>EAY10561.1 on XP_001611441  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 1205

 Score = 22.3 bits (46), Expect = 2.6,   Method: Composition-based stats.
 Identities = 8/31 (25%), Positives = 19/31 (61%)

Query: 26  LYDKSGKKQIRPKKSVKAMKVEEIDDAEWGD 56
           ++DK  +K+  P+++V  +++   DD +  D
Sbjct: 430 MHDKYPRKETNPQETVDKIEIHGQDDGDKTD 460



>EAY10561.1 on XP_817007   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 910

 Score = 21.9 bits (45), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 8/34 (23%), Positives = 21/34 (61%)

Query: 15  KGDDDDDNWGNLYDKSGKKQIRPKKSVKAMKVEE 48
            GDD+++    LY++ G ++ +P   + ++++ E
Sbjct: 424 SGDDNNEELIALYERKGDEKEKPSPGMVSVRLTE 457



>EAY10561.1 on XP_001608785  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 954

 Score = 21.6 bits (44), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 9/21 (42%), Positives = 16/21 (76%)

Query: 38  KKSVKAMKVEEIDDAEWGDWD 58
           KK V+A+K +E++DA++   D
Sbjct: 787 KKGVEALKSKEVEDAKFAIGD 807



>EAY10561.1 on XP_001350935  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2268

 Score = 21.6 bits (44), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 11/25 (44%), Positives = 14/25 (56%)

Query: 5   VQKVAKQQTNKGDDDDDNWGNLYDK 29
           VQKVA+ + +K  D    W   YDK
Sbjct: 560 VQKVARSEKSKNGDQIVTWECYYDK 584




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10563.1 modulator of drug activity B, putative
[Trichomonas vaginalis G3]
         (105 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001348250  Plasmepsin II  (Proteases)  [Plasmodium falciparum]      25   1.0  
AAS67870  Leucyl aminopeptidase  (Others)  [Trypanosoma brucei]        22   8.6  

>EAY10563.1 on XP_001348250  Plasmepsin II  (Proteases)  [Plasmodium falciparum]
          Length = 453

 Score = 25.0 bits (53), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 10/23 (43%), Positives = 15/23 (65%), Gaps = 1/23 (4%)

Query: 75  PAWWMGIPWFLKKYFNYFTYSSQ 97
           P + +G P F++KYF  F Y +Q
Sbjct: 421 PTFILGDP-FMRKYFTVFDYDNQ 442



>EAY10563.1 on AAS67870  Leucyl aminopeptidase  (Others)  [Trypanosoma brucei]
          Length = 671

 Score = 22.3 bits (46), Expect = 8.6,   Method: Composition-based stats.
 Identities = 7/16 (43%), Positives = 12/16 (75%)

Query: 12  LILDCGQETFVSKGNL 27
           LI+DCG  T ++ G++
Sbjct: 208 LIIDCGDRTSIASGSI 223




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10571.1 Calcium-binding protein, putative
[Trichomonas vaginalis G3]
         (158 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_817001   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   2.3  
AAK58479  MIC12  (Others)  [Toxoplasma gondii]                         24   5.2  

>EAY10571.1 on XP_817001   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 928

 Score = 25.0 bits (53), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 27/70 (38%), Gaps = 5/70 (7%)

Query: 32  NGQPA-NAPQANYQPPPPPPQQAGQYAPPPPGQYPPPGQYPPPPPGQYPPGQYAIPPPGQ 90
           NG  A NA +A   PP     Q  +   P PG+ P  GQ  P   G+   G   +P    
Sbjct: 717 NGIAALNAIKALITPPKETSAQ--EIVVPSPGRTPQAGQ-EPLNGGEGADG-LGVPKAAS 772

Query: 91  YPPGQYPPGQ 100
                 P GQ
Sbjct: 773 IASTSIPVGQ 782



>EAY10571.1 on AAK58479  MIC12  (Others)  [Toxoplasma gondii]
          Length = 255

 Score = 23.9 bits (50), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 15/92 (16%)

Query: 27  QVPPANGQPANAPQANYQPPPPPPQQAGQYAPP---PPGQYPPP----GQYPPPPPGQYP 79
           ++P     P   P+  + P    P+  G++ P    P G++ P     G++ P    + P
Sbjct: 5   EIPEGEHVPEEFPEGEHVPEEEIPE--GEHVPEEEIPEGEHVPEEFPEGEHIPE---ELP 59

Query: 80  PGQYAIPPPGQYPPGQYPPGQYPPGQYPPPQE 111
            G++    P ++P G++ P + P G++ P +E
Sbjct: 60  EGEHI---PEEFPEGEHIPEELPEGEHVPEEE 88




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10573.1 hypothetical protein TVAG_281730 [Trichomonas
vaginalis G3]
         (283 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609162  variant erythrocyte surface antigen-1, beta subuni...    27   1.2  
ACB87908  Rh5  (Adhesin)  [Plasmodium falciparum]                      26   3.6  

>EAY10573.1 on XP_001609162  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 1166

 Score = 27.3 bits (59), Expect = 1.2,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 12/108 (11%)

Query: 89  KLSNWAK-VSDKSILNRLDESIRSKV----YQIDLKEFGITNLHPFYPRG-FGYAAPYSH 142
           K +N+ K   DK+  N+ D + + +V    Y +++ +FG   LH  Y  G FG+    S 
Sbjct: 530 KCTNYGKKQEDKTDCNKKDLAEKGQVCYGGYHLEVSQFG--PLHGMYANGLFGFDMDLSA 587

Query: 143 NHLYIDQQQMNIAQYPRLGEFIKISSPTEAISIENGVGINDSRIYTWQ 190
               +DQ ++ +        F++       + +E+GVG   + +  WQ
Sbjct: 588 AQC-LDQLRVYVYHCFYQLYFLRKQC---TVGVESGVGAGGNTVLGWQ 631



>EAY10573.1 on ACB87908  Rh5  (Adhesin)  [Plasmodium falciparum]
          Length = 526

 Score = 25.8 bits (55), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 13/35 (37%), Positives = 18/35 (51%)

Query: 71  ENHTRIIGDKKTRLVGGIKLSNWAKVSDKSILNRL 105
           E HT+II DK   +   IKL+ W       +L R+
Sbjct: 425 EYHTKIINDKTKIIQDKIKLNIWRTFQKDELLKRI 459




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10574.1 hypothetical protein TVAG_281740 [Trichomonas
vaginalis G3]
         (287 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_820300   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   5.9  
XP_805883   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   7.5  

>EAY10574.1 on XP_820300   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 660

 Score = 25.0 bits (53), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 11/39 (28%), Positives = 24/39 (61%)

Query: 207 LLYACYKGDLELTKSLIEGGCDKDAVNKGGNNCLLIASL 245
           LLY+    + +L+K + +GGC   +V + G + L++ ++
Sbjct: 279 LLYSSDTKNWKLSKGMSDGGCSDPSVVEWGKDKLMMMTV 317



>EAY10574.1 on XP_805883   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1038

 Score = 24.6 bits (52), Expect = 7.5,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 13/117 (11%)

Query: 11  YFAKNIQTFIDQDNFYDVVEKEDIPKVLEKTN-LDSTTFKTLLSQGKSKYNSSKLYNIVR 69
           YFA N  T +   + ++V E   IP +  + N  DST    L       Y   K +  + 
Sbjct: 553 YFANNKFTLVATVSIHEVPESGSIPLIGVRMNDTDSTVLFGL------SYTHDKKWLAIP 606

Query: 70  KCAVSISSFEDALNVLKTYKDILKLKSSGSLI-----DFLYKYKTECITNSQEVSNF 121
           +   ++  F D     KTY+ +L++ S    +     +  YK     + NS+ +S+F
Sbjct: 607 EKRATLKLF-DGWEPNKTYQVVLQMDSDFWTVVVDGKEIHYKRYDANLFNSRRISHF 662




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10589.1 hypothetical protein TVAG_281890 [Trichomonas
vaginalis G3]
         (320 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_820135   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   6.0  
XP_821381   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   7.1  
XP_821397   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   7.1  

>EAY10589.1 on XP_820135   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1519

 Score = 25.4 bits (54), Expect = 6.0,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 29/74 (39%)

Query: 202  KLAIQQPIKQPTLQLKPLPPKPVLPLKKNPLDDLSDDDDGNFSFDSKDDDKPATPLKIIA 261
            K A  +P +Q + + KP  PKP  P    P        +   +     + KPA P     
Sbjct: 1294 KSAEPKPAEQKSAESKPAEPKPAEPKPAEPKPAEPKPAEPKSAEPKSAEPKPAEPKSAEP 1353

Query: 262  KAPLELSATPTSKK 275
            K   + SA P + +
Sbjct: 1354 KPAEQKSAEPKTAE 1367




 Score = 25.0 bits (53), Expect = 6.7,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 22/55 (40%)

Query: 202  KLAIQQPIKQPTLQLKPLPPKPVLPLKKNPLDDLSDDDDGNFSFDSKDDDKPATP 256
            K A  +P +Q + + KP  PKP  P    P        +   +     + KPA P
Sbjct: 1259 KSAEPKPAEQKSAEFKPAEPKPAEPKSAEPKPAEPKSAEPKPAEQKSAESKPAEP 1313



>EAY10589.1 on XP_821381   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 934

 Score = 25.0 bits (53), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 5/42 (11%)

Query: 141 LCLLSYNSKRESPRSSLSPGKSLSSNLAKFASKDDDSDDFSD 182
           LC  S   K  SP ++ SP   ++  L  F      SD+FSD
Sbjct: 480 LCTTSSAEKDASPENACSPTVKITDGLVGFL-----SDNFSD 516



>EAY10589.1 on XP_821397   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 932

 Score = 25.0 bits (53), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 5/42 (11%)

Query: 141 LCLLSYNSKRESPRSSLSPGKSLSSNLAKFASKDDDSDDFSD 182
           LC  S   K  SP ++ SP   ++  L  F      SD+FSD
Sbjct: 478 LCTTSSAEKDASPENACSPTVKITDGLVGFL-----SDNFSD 514




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10593.1 hypothetical protein TVAG_281930 [Trichomonas
vaginalis G3]
         (256 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_805038   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.3  
XP_001349513  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   8.6  

>EAY10593.1 on XP_805038   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 927

 Score = 26.9 bits (58), Expect = 1.3,   Method: Composition-based stats.
 Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 9/77 (11%)

Query: 15  VEPPPEQILSDFKIEEPPPPLSNIERTPQQGILSNLNLTAPVKQKKFKLEVTKEEPPLEI 74
           VE   +++ ++ +   PPP  +     PQQ   + LN T+ V         T  EP  E 
Sbjct: 709 VESANDRVNTNTQPTVPPPATAG----PQQTDQTTLN-TSSVPSGG--APPTPAEPKSEE 761

Query: 75  PKPVE-KP-KPKPVKKE 89
           PKP E +P +PKP + E
Sbjct: 762 PKPAESRPEEPKPAESE 778



>EAY10593.1 on XP_001349513  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2858

 Score = 24.3 bits (51), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 19/73 (26%), Positives = 28/73 (38%), Gaps = 15/73 (20%)

Query: 7   WIKSLNEHVEPPPEQILSDFKIEEPPPPLSNIERTPQQGILSNLNLTAPVKQKKFKLEVT 66
           WIK   E  +   E+ L D+KIE+     S               L   ++Q +F  +V 
Sbjct: 611 WIKKKGEEWKKIKERYLKDYKIEDNNSSNS---------------LNKFLQQNQFHSDVV 655

Query: 67  KEEPPLEIPKPVE 79
           K   P E  +  E
Sbjct: 656 KAIKPFENLRAFE 668




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10598.1 hypothetical protein TVAG_281980 [Trichomonas
vaginalis G3]
         (956 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001610713  variant erythrocyte surface antigen-1, alpha subun...    31   0.32 
XP_001609533  variant erythrocyte surface antigen-1, alpha subun...    30   0.59 
XP_001609618  variant erythrocyte surface antigen-1, alpha subun...    30   0.69 
XP_001351515  PfEMP1  (Establishment)  [Plasmodium falciparum]         30   0.86 
XP_001351514  PfEMP1  (Establishment)  [Plasmodium falciparum]         30   0.97 
XP_001351435  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   5.9  
XP_001609033  variant erythrocyte surface antigen-1, alpha subun...    27   9.1  

>EAY10598.1 on XP_001610713  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1294

 Score = 31.2 bits (69), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 21/111 (18%)

Query: 725 DAVRELKDEIIRAKSEIESAKNEINAKIDEENAIFAAQFEEAQDLIESAKSDKEEKLSQM 784
           +A+  +K  +  AK E+E AKN +N K+           EEA+D ++    D   KL ++
Sbjct: 670 EAIEGVKGALGEAKRELEGAKNGLNGKL-----------EEAKDGLKDKLQDAMTKLGEL 718

Query: 785 K--------IPHSERMQEAQDKHKLE--KESIKSRIEAKKSTMRENSKELN 825
                    +  S  +++A +K + +  K  I   I   +S M E  KEL 
Sbjct: 719 TNGGGILVDLLGSNGLEKAAEKGEYDPGKNKISEAIHKVRSVMEEIQKELG 769



>EAY10598.1 on XP_001609533  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1162

 Score = 30.4 bits (67), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 72/149 (48%), Gaps = 17/149 (11%)

Query: 688 KIRIYSDGTKEKELNDII-ANKESLFQASNDQ--LNNMYDDAVRELKDEIIRAKSEIESA 744
           K+ + S+G+  K++ D++ A  + + Q  N Q  L     +A+  +K  + +AK E+E A
Sbjct: 623 KLPLGSNGSDAKKIKDVLEAIGQVVVQLGNAQEALEGKDKEAINAVKTALEKAKGELEEA 682

Query: 745 KNEINAKIDEENAIFAAQFEEAQDLIESAKSDKEEKLSQMKIPHSERMQEAQDKHKLEKE 804
             ++N  +D        +  EA+  +E+  +     L ++     E+++ A +    E +
Sbjct: 683 VKKVNGGLD-------VKLGEAKTALEALTNGGSGILGEV----GEKLETATNG---EYD 728

Query: 805 SIKSRIEAKKSTMRENSKELNEKYNALKK 833
             K++I    + +RE  KEL +    LKK
Sbjct: 729 PGKNKISESINKVREVLKELEKVIKELKK 757



>EAY10598.1 on XP_001609618  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1325

 Score = 30.0 bits (66), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 11/85 (12%)

Query: 666 QIKREANANIKKINAEAEKIKEKIRIYSDGTKEKELNDIIANKESLFQASNDQ--LNNMY 723
           ++K E    I K+ A  EKI + I       K K L  ++A  E + Q  N Q  L    
Sbjct: 656 KVKGELGGVINKLKA-LEKIGDGIE------KAKAL--LVAIGEVVVQLGNAQEALEGKD 706

Query: 724 DDAVRELKDEIIRAKSEIESAKNEI 748
            DA+ ++K  +  AK+E++SAK E+
Sbjct: 707 KDAIGKVKTALGEAKTELDSAKQEL 731



>EAY10598.1 on XP_001351515  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2181

 Score = 30.0 bits (66), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 25/137 (18%)

Query: 210  APQLTESRN--KLEELEKSVKIVREDYNSVLKEKLAITNSFVKTKKRMIEEL-------- 259
            AP  T + N  KL +      ++R  Y   L+E      SF  T+KRM+E+L        
Sbjct: 1153 APSDTPTLNNPKLSDF-----VLRPTYFRYLEE---WGESFCGTRKRMLEQLEKVCRSGE 1204

Query: 260  ---KHKLKDLFIEMKNMKKTINSEKSDFESAVFQLQKKMRMNKSALDKKISQINSQISRQ 316
               +H   D  +  K+    +N      +S     +K  R  K  ++KK+ +   Q  + 
Sbjct: 1205 TGKEHCSGDGHVCEKDY---LNHNNMFADSYCPDCKKACRKYKKWIEKKLEEFQKQKDKY 1261

Query: 317  KQQLNQL-RDKIKMDKR 332
            K +L++L +DK   DK+
Sbjct: 1262 KGELDKLTKDKSGGDKK 1278



>EAY10598.1 on XP_001351514  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2201

 Score = 29.6 bits (65), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 25/137 (18%)

Query: 210  APQLTESRN--KLEELEKSVKIVREDYNSVLKEKLAITNSFVKTKKRMIEEL-------- 259
            AP  T + N  KL +      ++R  Y   L+E      SF  T+KRM+E+L        
Sbjct: 1173 APSDTPTLNNPKLSDF-----VLRPTYFRYLEE---WGESFCGTRKRMLEQLEKVCRSGE 1224

Query: 260  ---KHKLKDLFIEMKNMKKTINSEKSDFESAVFQLQKKMRMNKSALDKKISQINSQISRQ 316
               +H   D  +  K+    +N      +S     +K  R  K  ++KK+ +   Q  + 
Sbjct: 1225 TGKEHCSGDGHVCEKDY---LNHNNMFADSYCPDCKKACRKYKKWIEKKLEEFQKQKDKY 1281

Query: 317  KQQLNQL-RDKIKMDKR 332
            K +L++L +DK   DK+
Sbjct: 1282 KGELDKLTKDKSGGDKK 1298



>EAY10598.1 on XP_001351435  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2209

 Score = 27.3 bits (59), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 22/112 (19%)

Query: 831  LKKENQEQFDRTATMKEEELKKHNFILGDEK---------SNEKIDNLFDKITNILSDYI 881
            + KE+QE+ +++  + E+  ++  + LGD +          ++ +D + +KI  IL    
Sbjct: 1050 VGKEHQEKLEQSGIIPEDFKRQMFYTLGDYRDILFGKDISGDKNMDTIEEKINGILPK-- 1107

Query: 882  NVPSDPLSFNSQMFTLVTESQQKSDEIENLFNHIIEILNY----SSAETPTE 929
            N    P   N       T ++  S   E+++N +I  L Y    +S + PT+
Sbjct: 1108 NGTPSPAKKN-------TPTEWWSQNGEHIWNAMICALTYDTNTASGDKPTQ 1152



>EAY10598.1 on XP_001609033  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1270

 Score = 26.6 bits (57), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 24/102 (23%)

Query: 680 AEAEKIKEKIRIYSDGTKEKELNDIIANKESLFQASND---QLNNMYDD--------AVR 728
              EK+K+ +    DG KE   + + A  ++L +A  +   QL N  +         A+ 
Sbjct: 607 GRVEKVKDGL----DGVKEGA-DSVAAKVKALLEAIGEVVVQLGNAQEALEKKAENKAIE 661

Query: 729 ELKDEIIRAKSEIESAKNE--------INAKIDEENAIFAAQ 762
            +K  + +AK E+E AK E        + AK++EE   +  Q
Sbjct: 662 GVKGALEKAKKELEGAKGEEDDGVLTALYAKLEEEGVEWHGQ 703




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10603.1 hypothetical protein TVAG_282030 [Trichomonas
vaginalis G3]
         (131 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10604.1 hypothetical protein TVAG_282040 [Trichomonas
vaginalis G3]
         (273 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAM47174  Rh4  (Adhesin)  [Plasmodium falciparum]                      27   1.9  
AAM47175  Rh4  (Adhesin)  [Plasmodium falciparum]                      27   2.0  
AAM47192  Rh4  (Adhesin)  [Plasmodium falciparum]                      27   2.0  
XP_001351561  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   2.3  
XP_001348946  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   2.3  

>EAY10604.1 on AAM47174  Rh4  (Adhesin)  [Plasmodium falciparum]
          Length = 1711

 Score = 26.6 bits (57), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 189 RTRSIFYFDKKDLLEENRILAEEIEHLTNLVQRLHDV 225
           ++ SI  +DK   LEE +IL +EI    N++++++D+
Sbjct: 915 KSNSIHIYDKIHTLEELKILTQEIND-KNVIRKIYDI 950



>EAY10604.1 on AAM47175  Rh4  (Adhesin)  [Plasmodium falciparum]
          Length = 1711

 Score = 26.6 bits (57), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 189 RTRSIFYFDKKDLLEENRILAEEIEHLTNLVQRLHDV 225
           ++ SI  +DK   LEE +IL +EI    N++++++D+
Sbjct: 913 KSNSIHIYDKIHTLEELKILTQEIND-KNVIRKIYDI 948



>EAY10604.1 on AAM47192  Rh4  (Adhesin)  [Plasmodium falciparum]
          Length = 1716

 Score = 26.6 bits (57), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 189 RTRSIFYFDKKDLLEENRILAEEIEHLTNLVQRLHDV 225
           ++ SI  +DK   LEE +IL +EI    N++++++D+
Sbjct: 912 KSNSIHIYDKIHTLEELKILTQEIND-KNVIRKIYDI 947



>EAY10604.1 on XP_001351561  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3553

 Score = 26.2 bits (56), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)

Query: 160  EKNANTKTKSRLTSMNSKRSPLIPEIPETRTRSIFYF--DKKDLLEENRILAEEIE 213
            ++ A      R TS N ++     EIPE   R +FY   D +D+L  ++ + E +E
Sbjct: 2413 KQAAQNHLVQRKTSENPQKKLEGGEIPEDFKRQMFYTLGDYRDILVGDKTMIEALE 2468



>EAY10604.1 on XP_001348946  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3553

 Score = 26.2 bits (56), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)

Query: 160  EKNANTKTKSRLTSMNSKRSPLIPEIPETRTRSIFYF--DKKDLLEENRILAEEIE 213
            ++ A      R TS N ++     EIPE   R +FY   D +D+L  ++ + E +E
Sbjct: 2413 KQAAQNHLVQRKTSENPQKKLEGGEIPEDFKRQMFYTLGDYRDILVGDKTMIEALE 2468




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10609.1 enolase, putative [Trichomonas vaginalis G3]
         (493 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]                 29   0.90 

>EAY10609.1 on XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]
          Length = 2112

 Score = 28.9 bits (63), Expect = 0.90,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 5/42 (11%)

Query: 362  DGLEEKDYETWIKLNEQLGSKIQLVGDDLYTTNPKMIEQGIE 403
            DG E  D+ETW++  E+      ++G++ +  N K++ + +E
Sbjct: 1861 DGGECSDWETWVECKEE-----DMIGNNCHKRNKKILTRKLE 1897




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10610.1 AGC family protein kinase [Trichomonas
vaginalis G3]
         (398 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    38   8e-04
XP_820450   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   0.48 
XP_820067   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   0.49 
XP_806340   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   9.2  

>EAY10610.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 37.7 bits (86), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 16/107 (14%)

Query: 108 RLYMLEIFYAIAYQLTLMRENGIKHRDFKPDNIVVDGD-MIPHIIDWD-----DSTNRFS 161
           + Y+ ++  A+ Y        GI HRD KP N+++D +  I  +IDW           +S
Sbjct: 150 KYYIYQLLKAMNY----CHSQGIMHRDIKPHNVMIDHEKKILRLIDWGLAEFYHPEQEYS 205

Query: 162 LSINEHHGTIPFAAPEIFSGQRKCES--DIFSFGAIMFNMITECYPF 206
           + +     T  +  PE+    R  +   DI+S G ++  +I +  PF
Sbjct: 206 VRV----ATRYYKGPELLVDMRYYDYSLDIWSIGCMLAGIIFKKEPF 248



>EAY10610.1 on XP_820450   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 724

 Score = 29.3 bits (64), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 4/40 (10%)

Query: 344 QKEYGTKEMIDKANKLGFYENNETLY----SIIKAENPSF 379
           QK Y T+E  DKA  L   +NN T Y    S+  AEN +F
Sbjct: 394 QKRYPTQEQKDKALYLWVTDNNRTFYVGPFSVDSAENKTF 433



>EAY10610.1 on XP_820067   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 722

 Score = 29.3 bits (64), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 4/40 (10%)

Query: 344 QKEYGTKEMIDKANKLGFYENNETLY----SIIKAENPSF 379
           QK Y T+E  DKA  L   +NN T Y    S+  AEN +F
Sbjct: 395 QKRYPTQEQKDKALYLWVTDNNRTFYVGPFSVDSAENKTF 434



>EAY10610.1 on XP_806340   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 633

 Score = 25.0 bits (53), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 4/40 (10%)

Query: 344 QKEYGTKEMIDKANKLGFYENNETLY----SIIKAENPSF 379
           QK Y T+E  DKA  L   +NN T +    ++  AEN +F
Sbjct: 305 QKRYPTEEQKDKALYLWVTDNNRTFHLGPVAMDSAENKTF 344




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10611.1 hypothetical protein TVAG_282110 [Trichomonas
vaginalis G3]
         (741 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_843744  VSG  (Establishment)  [Trypanosoma brucei]                  27   5.5  

>EAY10611.1 on XP_843744  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 366

 Score = 26.6 bits (57), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 13/52 (25%), Positives = 24/52 (46%)

Query: 174 CDKDIADYNRQTSSAMSDITPRIAVIESKATALEATAEGFVRMIGQTQDMIN 225
           C +     NR       D   R   ++ + +++E   EGF +++   +DMIN
Sbjct: 216 CSRCARGDNRAVWRPDEDAGERWYFLKEQCSSMEGPQEGFNKLVNDFRDMIN 267




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10612.1 nucleolar RNA-binding protein, putative
[Trichomonas vaginalis G3]
         (62 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_814219   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   0.36 
XP_821703   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   0.42 
ABA06463  MSA-2c  (Invasion)  [Babesia bovis]                          24   0.72 
ABA06475  MSA-2a1  (Invasion)  [Babesia bovis]                         24   0.72 
XP_818896   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   1.2  
XP_818892   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   1.2  
XP_818893   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   1.2  
XP_001349219  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   1.3  
XP_829794  VSG  (Establishment)  [Trypanosoma brucei]                  23   1.6  
XP_829767  VSG  (Establishment)  [Trypanosoma brucei]                  22   2.8  
XP_001350796  PfEMP1  (Establishment)  [Plasmodium falciparum]         22   3.4  
XP_001609565  variant erythrocyte surface antigen-1, alpha subun...    22   3.6  
XP_828102  VSG  (Establishment)  [Trypanosoma brucei]                  22   5.1  
XP_001349437  PfEMP1  (Establishment)  [Plasmodium falciparum]         21   7.8  

>EAY10612.1 on XP_814219   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 958

 Score = 24.6 bits (52), Expect = 0.36,   Method: Composition-based stats.
 Identities = 8/18 (44%), Positives = 11/18 (61%)

Query: 21  CGGQTRSAHPARFSPEDK 38
           CGG+T   H + + PE K
Sbjct: 635 CGGETHKKHSSTWDPETK 652



>EAY10612.1 on XP_821703   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 912

 Score = 24.6 bits (52), Expect = 0.42,   Method: Composition-based stats.
 Identities = 8/21 (38%), Positives = 13/21 (61%)

Query: 15  KQKCPRCGGQTRSAHPARFSP 35
           K++   CGGQT + H + + P
Sbjct: 691 KKRAVLCGGQTTTEHSSNWEP 711



>EAY10612.1 on ABA06463  MSA-2c  (Invasion)  [Babesia bovis]
          Length = 265

 Score = 23.9 bits (50), Expect = 0.72,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 38  KNSAERIQTKAKFNLLPYQQPDIEY 62
           K   + I+T A FN   +  PD+EY
Sbjct: 84  KAVKQLIKTDAPFNTSDFDTPDLEY 108



>EAY10612.1 on ABA06475  MSA-2a1  (Invasion)  [Babesia bovis]
          Length = 265

 Score = 23.9 bits (50), Expect = 0.72,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 38  KNSAERIQTKAKFNLLPYQQPDIEY 62
           K   + I+T A FN   +  PD+EY
Sbjct: 84  KAVKQLIKTDAPFNTSDFDTPDLEY 108



>EAY10612.1 on XP_818896   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 725

 Score = 23.5 bits (49), Expect = 1.2,   Method: Composition-based stats.
 Identities = 7/16 (43%), Positives = 10/16 (62%)

Query: 21  CGGQTRSAHPARFSPE 36
           CGG+T   H + + PE
Sbjct: 634 CGGETHKKHSSTWDPE 649



>EAY10612.1 on XP_818892   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 956

 Score = 23.5 bits (49), Expect = 1.2,   Method: Composition-based stats.
 Identities = 7/16 (43%), Positives = 10/16 (62%)

Query: 21  CGGQTRSAHPARFSPE 36
           CGG+T   H + + PE
Sbjct: 633 CGGETHKKHSSTWDPE 648



>EAY10612.1 on XP_818893   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 956

 Score = 23.5 bits (49), Expect = 1.2,   Method: Composition-based stats.
 Identities = 7/16 (43%), Positives = 10/16 (62%)

Query: 21  CGGQTRSAHPARFSPE 36
           CGG+T   H + + PE
Sbjct: 633 CGGETHKKHSSTWDPE 648



>EAY10612.1 on XP_001349219  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2595

 Score = 23.1 bits (48), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 12/46 (26%), Positives = 20/46 (43%)

Query: 4    QFCDQCKQYTLKQKCPRCGGQTRSAHPARFSPEDKNSAERIQTKAK 49
            ++CD C Q+ +  K  +C       +  R +  D    E I+T  K
Sbjct: 1385 KYCDPCSQFKIDCKNGKCKSGDTKVNCNRKNTIDATEIENIKTNTK 1430



>EAY10612.1 on XP_829794  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 476

 Score = 22.7 bits (47), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/21 (47%), Positives = 11/21 (52%)

Query: 9   CKQYTLKQKCPRCGGQTRSAH 29
           CK  T  QK  +CG QT   H
Sbjct: 400 CKTETSTQKPQQCGSQTTPEH 420



>EAY10612.1 on XP_829767  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 452

 Score = 22.3 bits (46), Expect = 2.8,   Method: Composition-based stats.
 Identities = 7/12 (58%), Positives = 8/12 (66%)

Query: 9   CKQYTLKQKCPR 20
           CKQYT    CP+
Sbjct: 407 CKQYTTNSTCPK 418



>EAY10612.1 on XP_001350796  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2646

 Score = 21.9 bits (45), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 7/25 (28%), Positives = 13/25 (52%)

Query: 2    YLQFCDQCKQYTLKQKCPRCGGQTR 26
            +   CD C ++ +K +   C G T+
Sbjct: 1806 HTNLCDSCSEFKIKCENGVCSGDTK 1830



>EAY10612.1 on XP_001609565  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1341

 Score = 21.9 bits (45), Expect = 3.6,   Method: Composition-based stats.
 Identities = 8/16 (50%), Positives = 10/16 (62%)

Query: 14  LKQKCPRCGGQTRSAH 29
           L ++C RC G   SAH
Sbjct: 185 LGRRCKRCSGSGGSAH 200



>EAY10612.1 on XP_828102  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 471

 Score = 21.6 bits (44), Expect = 5.1,   Method: Composition-based stats.
 Identities = 8/16 (50%), Positives = 10/16 (62%)

Query: 7   DQCKQYTLKQKCPRCG 22
           D+CKQY  K+ C   G
Sbjct: 406 DECKQYKPKKTCEENG 421



>EAY10612.1 on XP_001349437  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2231

 Score = 21.2 bits (43), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 10/45 (22%), Positives = 19/45 (42%)

Query: 2    YLQFCDQCKQYTLKQKCPRCGGQTRSAHPARFSPEDKNSAERIQT 46
            + ++C  C ++ +K K   CG           +P D N   ++ T
Sbjct: 1377 HTEYCGPCSEFKVKCKNGACGDSNTQKKCNGITPIDGNEIAKMIT 1421




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10633.1 hypothetical protein TVAG_282330, partial
[Trichomonas vaginalis G3]
         (109 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAW78133  TRAP  (Invasion)  [Plasmodium falciparum]                    23   6.1  
AAW78168  TRAP  (Invasion)  [Plasmodium falciparum]                    23   6.5  
AAW78167  TRAP  (Invasion)  [Plasmodium falciparum]                    23   6.8  
AAW78174  TRAP  (Invasion)  [Plasmodium falciparum]                    23   7.1  
AAW78164  TRAP  (Invasion)  [Plasmodium falciparum]                    23   7.1  
AAW78156  TRAP  (Invasion)  [Plasmodium falciparum]                    23   7.3  
AAW78147  TRAP  (Invasion)  [Plasmodium falciparum]                    23   7.6  
AAW78146  TRAP  (Invasion)  [Plasmodium falciparum]                    23   7.6  
AAQ11892  TRAP  (Invasion)  [Plasmodium falciparum]                    23   7.6  
AAW78148  TRAP  (Invasion)  [Plasmodium falciparum]                    23   7.7  
AAQ11895  TRAP  (Invasion)  [Plasmodium falciparum]                    23   7.8  
AAA29776  TRAP  (Invasion)  [Plasmodium falciparum]                    23   7.8  
AAW78165  TRAP  (Invasion)  [Plasmodium falciparum]                    23   7.8  
AAW78130  TRAP  (Invasion)  [Plasmodium falciparum]                    22   8.0  

>EAY10633.1 on AAW78133  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 22.7 bits (47), Expect = 6.1,   Method: Composition-based stats.
 Identities = 11/23 (47%), Positives = 14/23 (60%)

Query: 80  PKLPEIQQQKLTIPEFDEIEVKA 102
           P  P+I +QK  IPE  E EV +
Sbjct: 352 PPNPDIPEQKPNIPEDSEKEVPS 374



>EAY10633.1 on AAW78168  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 22.7 bits (47), Expect = 6.5,   Method: Composition-based stats.
 Identities = 11/23 (47%), Positives = 14/23 (60%)

Query: 80  PKLPEIQQQKLTIPEFDEIEVKA 102
           P  P+I +QK  IPE  E EV +
Sbjct: 352 PPNPDIPEQKPNIPEDSEKEVPS 374



>EAY10633.1 on AAW78167  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 575

 Score = 22.7 bits (47), Expect = 6.8,   Method: Composition-based stats.
 Identities = 11/23 (47%), Positives = 14/23 (60%)

Query: 80  PKLPEIQQQKLTIPEFDEIEVKA 102
           P  P+I +QK  IPE  E EV +
Sbjct: 388 PSNPDIPEQKPNIPEDSEKEVPS 410



>EAY10633.1 on AAW78174  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 22.7 bits (47), Expect = 7.1,   Method: Composition-based stats.
 Identities = 11/23 (47%), Positives = 14/23 (60%)

Query: 80  PKLPEIQQQKLTIPEFDEIEVKA 102
           P  P+I +QK  IPE  E EV +
Sbjct: 352 PPNPDIPEQKPNIPEDSEKEVPS 374



>EAY10633.1 on AAW78164  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 22.7 bits (47), Expect = 7.1,   Method: Composition-based stats.
 Identities = 11/23 (47%), Positives = 14/23 (60%)

Query: 80  PKLPEIQQQKLTIPEFDEIEVKA 102
           P  P+I QQ+  IPE  E EV +
Sbjct: 352 PPNPDIPQQEPNIPEDSEKEVPS 374



>EAY10633.1 on AAW78156  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 581

 Score = 22.7 bits (47), Expect = 7.3,   Method: Composition-based stats.
 Identities = 11/23 (47%), Positives = 14/23 (60%)

Query: 80  PKLPEIQQQKLTIPEFDEIEVKA 102
           P  P+I +QK  IPE  E EV +
Sbjct: 394 PSNPDIPEQKPNIPEDSEKEVPS 416



>EAY10633.1 on AAW78147  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 22.7 bits (47), Expect = 7.6,   Method: Composition-based stats.
 Identities = 11/23 (47%), Positives = 14/23 (60%)

Query: 80  PKLPEIQQQKLTIPEFDEIEVKA 102
           P  P+I +QK  IPE  E EV +
Sbjct: 352 PPNPDIPEQKPNIPEDSEKEVPS 374



>EAY10633.1 on AAW78146  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 22.7 bits (47), Expect = 7.6,   Method: Composition-based stats.
 Identities = 11/23 (47%), Positives = 14/23 (60%)

Query: 80  PKLPEIQQQKLTIPEFDEIEVKA 102
           P  P+I +QK  IPE  E EV +
Sbjct: 352 PPNPDIPEQKPNIPEDSEKEVPS 374



>EAY10633.1 on AAQ11892  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 559

 Score = 22.7 bits (47), Expect = 7.6,   Method: Composition-based stats.
 Identities = 11/23 (47%), Positives = 14/23 (60%)

Query: 80  PKLPEIQQQKLTIPEFDEIEVKA 102
           P  P+I QQ+  IPE  E EV +
Sbjct: 352 PPNPDIPQQEPNIPEDSEKEVPS 374



>EAY10633.1 on AAW78148  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 22.7 bits (47), Expect = 7.7,   Method: Composition-based stats.
 Identities = 11/23 (47%), Positives = 14/23 (60%)

Query: 80  PKLPEIQQQKLTIPEFDEIEVKA 102
           P  P+I QQ+  IPE  E EV +
Sbjct: 352 PPNPDIPQQEPNIPEDSEKEVPS 374



>EAY10633.1 on AAQ11895  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 559

 Score = 22.7 bits (47), Expect = 7.8,   Method: Composition-based stats.
 Identities = 11/23 (47%), Positives = 14/23 (60%)

Query: 80  PKLPEIQQQKLTIPEFDEIEVKA 102
           P  P+I QQ+  IPE  E EV +
Sbjct: 352 PPNPDIPQQEPNIPEDSEKEVPS 374



>EAY10633.1 on AAA29776  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 559

 Score = 22.7 bits (47), Expect = 7.8,   Method: Composition-based stats.
 Identities = 11/23 (47%), Positives = 14/23 (60%)

Query: 80  PKLPEIQQQKLTIPEFDEIEVKA 102
           P  P+I QQ+  IPE  E EV +
Sbjct: 352 PPNPDIPQQEPNIPEDSEKEVPS 374



>EAY10633.1 on AAW78165  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 22.7 bits (47), Expect = 7.8,   Method: Composition-based stats.
 Identities = 11/23 (47%), Positives = 14/23 (60%)

Query: 80  PKLPEIQQQKLTIPEFDEIEVKA 102
           P  P+I QQ+  IPE  E EV +
Sbjct: 352 PPNPDIPQQEPNIPEDSEKEVPS 374



>EAY10633.1 on AAW78130  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 22.3 bits (46), Expect = 8.0,   Method: Composition-based stats.
 Identities = 11/23 (47%), Positives = 14/23 (60%)

Query: 80  PKLPEIQQQKLTIPEFDEIEVKA 102
           P  P+I QQ+  IPE  E EV +
Sbjct: 352 PPNPDIPQQEPNIPEDSEKEVPS 374




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10638.1 CAMK family protein kinase [Trichomonas
vaginalis G3]
         (302 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    69   3e-14
XP_001349219  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   3.9  
XP_001350413  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   4.6  

>EAY10638.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 68.9 bits (167), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/297 (21%), Positives = 124/297 (41%), Gaps = 42/297 (14%)

Query: 7   YEPRRFLGAGSFGGVWECQNKTTGESVACKLIDLNTALSDKVYPHFRNEILIHSKINHPS 66
           YE  R +G G F  V+E  N  T +    K++        K         ++ +    P+
Sbjct: 55  YEIVRKIGRGKFSEVFEGLNTVTKDKCVIKILKPVKKKKIKR-----EIKILQNLRGGPN 109

Query: 67  VTQLKDVILD--NDNVYIFLELCDGGDMNDIVQEFGGLSEDEAEHYFHQIMEALSYIHKL 124
           + +L D++ D  +    +  E  +  D   +   +  L+  + ++Y +Q+++A++Y H  
Sbjct: 110 IIKLLDIVKDPQSRTPSLIFEHVNNTDFKTL---YPTLTIQDIKYYIYQLLKAMNYCHSQ 166

Query: 125 GVAHRDVKLENILVTADDDA-KLTDFGLCKQQHGNDPMLTTCGTLVYAAPEIIQEKPYNG 183
           G+ HRD+K  N+++  +    +L D+GL +  H          T  Y  PE++ +  Y  
Sbjct: 167 GIMHRDIKPHNVMIDHEKKILRLIDWGLAEFYHPEQEYSVRVATRYYKGPELLVDMRYYD 226

Query: 184 MKADIWSAGVVLYAMVAAHFPWIVPDD-----------MPPENIMK---------ETARQ 223
              DIWS G +L  ++    P+    D           +  E++ +           A Q
Sbjct: 227 YSLDIWSIGCMLAGIIFKKEPFFYGHDNYDQLVKIAKVLGTEDLHRYFEKYGLKFAPAYQ 286

Query: 224 IVEGDIALPDG-----------ISYELQNLMANLLNVDPNERPTAAEVLEHPWFQNV 269
            + G+ +               +S E+ +L+  +L  D  +R T  E +EHP+F  +
Sbjct: 287 EILGNHSKKPWTKFVHHENQHLVSPEVMDLLDRMLVYDHTKRITPLEAMEHPFFNEI 343



>EAY10638.1 on XP_001349219  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2595

 Score = 25.8 bits (55), Expect = 3.9,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 7/47 (14%)

Query: 224  IVEGDIALPDGISYELQNLMANLLNVDPNERPTAAE--VLEHPWFQN 268
            IV+GD  L DG+S  +Q ++  L     NE+ + AE   L+  W  N
Sbjct: 1828 IVKGDDMLGDGLSEIIQKILVKL-----NEKKSNAEKLALQQLWENN 1869



>EAY10638.1 on XP_001350413  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2860

 Score = 25.8 bits (55), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 10/25 (40%), Positives = 18/25 (72%)

Query: 224  IVEGDIALPDGISYELQNLMANLLN 248
            I++GD  L DGIS +++N+  + +N
Sbjct: 2181 IIKGDDMLDDGISEKIENIFEHKIN 2205




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10639.1 hypothetical protein TVAG_157160 [Trichomonas
vaginalis G3]
         (1035 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609533  variant erythrocyte surface antigen-1, alpha subun...    39   0.002
XP_001609667  variant erythrocyte surface antigen-1, alpha subun...    30   0.90 
XP_001610567  variant erythrocyte surface antigen-1, alpha subun...    28   2.7  
XP_828092  VSG  (Establishment)  [Trypanosoma brucei]                  27   5.7  
XP_001351876  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   5.8  
XP_001352170  MSP1  (Invasion)  [Plasmodium falciparum]                27   6.3  
XP_001350415  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   6.4  
XP_001350410  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   6.6  
XP_844697  VSG  (Establishment)  [Trypanosoma brucei]                  27   7.1  

>EAY10639.1 on XP_001609533  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1162

 Score = 38.5 bits (88), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 103/229 (44%), Gaps = 41/229 (17%)

Query: 633 KVVKDISALRSQLVDEKRRAEVLQAVVDKFN-ASFGN---SQGDVTDKIHLICDKMEKKK 688
           +VV  I AL  QL   +++  V  A+  K+    +G    S+G V   + L CD ME   
Sbjct: 552 QVVHYIRALFYQLYFLRKQCAVKVALGGKWRECRYGKDVVSKG-VISWMCLGCDPME--- 607

Query: 689 EIIATRTEKCKAYKQALNDAEMKITEM-ERDNQFNLETKDMEIKDLTEKNKSLTEQLKQL 747
                            +D + ++ EM  + N+  L +   + K + +  +++ + + QL
Sbjct: 608 -----------------HDRKWRVKEMGNKLNKLPLGSNGSDAKKIKDVLEAIGQVVVQL 650

Query: 748 KAENKQLKDTTTEQQEQIESIKQELEENKESLEEERKCLEETISRKHEEANTNLQSELSA 807
               + L+    + +E I ++K  LE+ K  LEE  K +   +  K  EA T L++  + 
Sbjct: 651 GNAQEALEG---KDKEAINAVKTALEKAKGELEEAVKKVNGGLDVKLGEAKTALEALTNG 707

Query: 808 ASANVVELTEQCQ------------RLKEAVTMQKGIIAEREKVIEELK 844
            S  + E+ E+ +            ++ E++   + ++ E EKVI+ELK
Sbjct: 708 GSGILGEVGEKLETATNGEYDPGKNKISESINKVREVLKELEKVIKELK 756



>EAY10639.1 on XP_001609667  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1303

 Score = 30.0 bits (66), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 67/158 (42%), Gaps = 28/158 (17%)

Query: 633 KVVKDISALRSQLVDEKRRAEVLQAVVDKFN-ASFGNS--QGDVTDKIHLICDKMEKKKE 689
           +VV  I AL  QL   +++  V      K+    +G+     DV   + L CD ME  + 
Sbjct: 580 QVVHYIRALFYQLYFLRKQCAVKVTCGGKWRECRYGDGVLGKDVVSWMCLGCDPMEHDR- 638

Query: 690 IIATRTEKCKAYKQALNDAEMKITEMERDNQFNLETKDMEIKDLTEKNKSLTEQLKQLKA 749
              +R  K K     +                       ++KD+ EK   + E + QL  
Sbjct: 639 --GSRVGKVKGVLDGVKGG----------------GDAGKLKDVLEK---IGEVVVQLGN 677

Query: 750 ENKQLKDTTTEQQEQIESIKQELEENKESLEEERKCLE 787
             + L+     + E+I+ ++++L+E K+ LEE RK LE
Sbjct: 678 AQEALE---RRKGEEIKGVQKKLQEAKKGLEEARKELE 712



>EAY10639.1 on XP_001610567  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1315

 Score = 28.5 bits (62), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 13/29 (44%), Positives = 21/29 (72%)

Query: 760 EQQEQIESIKQELEENKESLEEERKCLEE 788
           +++E IE +K +L+E KE L++ R  LEE
Sbjct: 699 KKKEAIEGVKAKLQEAKEGLDKARTALEE 727



>EAY10639.1 on XP_828092  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 532

 Score = 27.3 bits (59), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 9/99 (9%)

Query: 797 ANTNLQSELSAASANVVELTEQCQRLKEAVTMQKGIIAER-EKVIEELKADLAKTTDSYE 855
           A   LQ+++ A     +   EQC+ +   VT++   +  R  + IE + A   KT +   
Sbjct: 89  AAMGLQAKIKADVTAKMAAAEQCRTISTVVTLRSAYLHGRIAEFIEMMTAMRGKTNE--- 145

Query: 856 TRHEIEKKQIIESYEKAIQEITKQ---CEMHRSDVEKLS 891
             H    KQ   +   A + ITKQ   C++H  ++ K S
Sbjct: 146 --HACLSKQGDGTDRAAGETITKQQATCKLHSEELTKHS 182



>EAY10639.1 on XP_001351876  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3164

 Score = 27.3 bits (59), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 12/39 (30%), Positives = 25/39 (64%), Gaps = 2/39 (5%)

Query: 310  PAQPAKQAS--DKAVPAQEKQQPVKSRNVPQQTEQPKAA 346
            PA P+++AS  +KAV ++++++  +    P++ EQP   
Sbjct: 1997 PASPSRRASLKEKAVASKKEEKTARPTKPPKKVEQPPTG 2035



>EAY10639.1 on XP_001352170  MSP1  (Invasion)  [Plasmodium falciparum]
          Length = 1720

 Score = 27.3 bits (59), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 14/38 (36%), Positives = 23/38 (60%)

Query: 471 KKQIFDIQFDKEEYNRKLAEKDDKIRSLENEIKELRKS 508
           KK+++  Q+D   YN++L E  + I  LE  I  L+K+
Sbjct: 290 KKKLYQAQYDLSIYNKQLEEAHNLISVLEKRIDTLKKN 327



>EAY10639.1 on XP_001350415  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3056

 Score = 27.3 bits (59), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 16/48 (33%), Positives = 23/48 (47%)

Query: 917 RAEAEIKSLEEQISREKKLTESAIKNAAIANEADASNKINAVKAKADE 964
           + EA   SLE  I  +    E A K + I N +DA+N    ++   DE
Sbjct: 375 KLEANYSSLENYIKGDPYFAEYATKLSFILNSSDANNPSEKIQKNNDE 422



>EAY10639.1 on XP_001350410  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2178

 Score = 27.3 bits (59), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 2/72 (2%)

Query: 220 ERSPEYEAKIKELKVQLKKQISVTKDLEEQIRINARSTTQLTNKHNAEVESLKAKIAQIN 279
           +++PE        K++ +   +VTK  +++     R T + ++K  AE    K KI    
Sbjct: 58  DKNPEGTTPPNPCKLEYQYHTNVTKGEDKEYPCLGRKTVRFSDKEGAEC--YKTKIKDST 115

Query: 280 EDNANTVNDYKR 291
            D       Y+R
Sbjct: 116 TDTVGACAPYRR 127



>EAY10639.1 on XP_844697  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 342

 Score = 26.6 bits (57), Expect = 7.1,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 9/80 (11%)

Query: 279 NEDNA------NTVNDYKRKITNL-ENKIAAAKDKDQKPAQPAKQASDK--AVPAQEKQQ 329
           NEDNA      N + D  R++  + +++ A+   K +   +P+ + + K   VP+     
Sbjct: 228 NEDNASGIEWLNKLEDLVREVEEMSKDESASGSTKPRAEGKPSMEKNPKPNTVPSTGDNS 287

Query: 330 PVKSRNVPQQTEQPKAAQPT 349
           P K    PQ    P A   T
Sbjct: 288 PAKGTEGPQNDGNPNAQATT 307




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10642.1 Variant SH3 domain containing protein
[Trichomonas vaginalis G3]
         (422 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10649.1 hypothetical protein TVAG_157260 [Trichomonas
vaginalis G3]
         (554 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001349034  PfEMP1  (Establishment)  [Plasmodium falciparum]         30   0.61 

>EAY10649.1 on XP_001349034  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2215

 Score = 29.6 bits (65), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 7/77 (9%)

Query: 317  SPILPAKPKYEAILGCPSPIICGVLKNPNLDLSETCDEKCIVDIDNGSVIDDELDVLGQI 376
            +P    KP  E  + C +    G  K+ + D  E C+EK  +D+++   I+++ DV   +
Sbjct: 1383 TPATNCKPCPEFKINCKN----GKCKSGDGDTKEKCNEKTTIDVND---IENKTDVNNIV 1435

Query: 377  LPRADAIKEDIERILAA 393
            +  +D  K   E +L A
Sbjct: 1436 MLVSDDNKNKSETVLEA 1452




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10653.1 GTP-binding protein SAR2, putative
[Trichomonas vaginalis G3]
         (194 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_649196  Rab7A  (Establishment)  [Entamoeba histolytica]             39   9e-05
BAD34969  Rab7B  (Establishment)  [Entamoeba histolytica]              38   1e-04
BAB40673  Rab5  (Establishment)  [Entamoeba histolytica]               37   2e-04
XP_818353   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   0.21 
XP_821162   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   2.7  
XP_820307   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   5.4  
XP_805897   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   7.0  
XP_808562   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   7.3  
XP_808161   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   7.6  
XP_821388   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   9.0  
XP_807541   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   9.4  
XP_813587   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   9.5  

>EAY10653.1 on XP_649196  Rab7A  (Establishment)  [Entamoeba histolytica]
          Length = 206

 Score = 38.5 bits (88), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 54/138 (39%), Gaps = 27/138 (19%)

Query: 26  KMLLLGLDNAGKTTLLQCLKTGNFQQFEQTKTYQIVDLTIEGIHFSAFDL--GGHDIARQ 83
           K+++LG    GKT+L+         QF   K   +   TI G  F   DL    H++  Q
Sbjct: 9   KVIILGDSGVGKTSLMN--------QFVNHKYSSVYKATI-GADFLTKDLVVDNHEVTMQ 59

Query: 84  SWQD------------YYVNANAIVFMVDAAAPDRFAEAKTELDKLLSDETLKN---VPF 128
            W              +Y  A+      D   P  F       ++ L   + KN    PF
Sbjct: 60  IWDTAGNERFQSLGVAFYRGADCCALCYDVNDPKTFESLNNWREEFLVQASPKNQDQFPF 119

Query: 129 LILGNKVDIPTAVSPDQL 146
           ++LGNKVD     SPD +
Sbjct: 120 VVLGNKVDTYEG-SPDAI 136



>EAY10653.1 on BAD34969  Rab7B  (Establishment)  [Entamoeba histolytica]
          Length = 207

 Score = 38.1 bits (87), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 11/132 (8%)

Query: 26  KMLLLGLDNAGKTTLLQCLKTGNF-QQFEQT--KTYQIVDLTI--EGIHFSAFDLGGHDI 80
           K+++LG    GKT+LL    T  F  Q++ T    +   D+TI  + I    +D  GH+ 
Sbjct: 12  KIIILGDSGVGKTSLLNQYVTKQFSSQYKATIGADFMTKDITINDQQISLQIWDTAGHER 71

Query: 81  ARQSWQDYYVNANAIVFMVDAAAPDRFAEAKTELDKLLS---DETLKNVPFLILGNKVDI 137
                  +Y  A+  + + D    + F   +    + +S       ++ P++++ NK D 
Sbjct: 72  FASFGTAFYRGADVCMLVCDVTVAESFEHLEVWRKEFISGGNPSDPESFPYVVIANKNDC 131

Query: 138 PT---AVSPDQL 146
                AVS DQL
Sbjct: 132 EPANRAVSSDQL 143



>EAY10653.1 on BAB40673  Rab5  (Establishment)  [Entamoeba histolytica]
          Length = 195

 Score = 37.0 bits (84), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 13/123 (10%)

Query: 26  KMLLLGLDNAGKTTLLQCLKTGNFQQFEQ--------TKTYQIVDLTIEGIHFSAFDLGG 77
           K++LLG  + GK++++  +    +++F++        TKT  IVD   E I F  +D  G
Sbjct: 10  KIVLLGDSSVGKSSIVLRVCKDEYKEFQENTIGAAFLTKTL-IVDG--ETIKFEIWDTAG 66

Query: 78  HDIARQSWQDYYVNANAIVFMVDAAAPDRFAEAKTELDKLLSDETLKNVPFLILGNKVDI 137
            +        YY  +NA + + D  +   F +AK  +D+L      + + FL+ GNK D+
Sbjct: 67  QERYHSLTPMYYRGSNAALVVYDITSDSSFIQAKKWIDELRGSGN-EAIIFLV-GNKCDL 124

Query: 138 PTA 140
             +
Sbjct: 125 DNS 127



>EAY10653.1 on XP_818353   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 903

 Score = 28.9 bits (63), Expect = 0.21,   Method: Composition-based stats.
 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 7/71 (9%)

Query: 20  LSNKNAKMLLLGLD-NAGKTTLLQC---LKTGNFQQFEQTKTYQIVDLTIEGIHFSAFDL 75
           + N + K  L+ L  ++GK   L C       N   +E+ KT  +V L   G HFSA+  
Sbjct: 607 MMNGDGKTKLMELSYDSGKNWQLLCGGNTTKENSNTWEKEKTQHVVLLIRNGSHFSAYAD 666

Query: 76  G---GHDIARQ 83
           G   G D+ R+
Sbjct: 667 GKQVGEDVPRE 677



>EAY10653.1 on XP_821162   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 787

 Score = 25.4 bits (54), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 2/40 (5%)

Query: 17  WLGLSNKNAKMLLLGLDNAGKTTLLQCL--KTGNFQQFEQ 54
           W+  SN++  +  +G+DNAGK  L+  L    GN    ++
Sbjct: 410 WVTDSNRSFSVGPVGMDNAGKGELVSALLYSDGNLHLLQR 449



>EAY10653.1 on XP_820307   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 964

 Score = 24.6 bits (52), Expect = 5.4,   Method: Composition-based stats.
 Identities = 9/26 (34%), Positives = 14/26 (53%)

Query: 79  DIARQSWQDYYVNANAIVFMVDAAAP 104
           + +  +W+D Y+  NA V   D A P
Sbjct: 539 NFSENTWRDEYLGVNATVKKKDGAEP 564



>EAY10653.1 on XP_805897   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 755

 Score = 24.3 bits (51), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 10/95 (10%)

Query: 3   YFSSVWNWLT-----NVLSWLG---LSNKNAKMLLLGLDNAGKTTLL-QCLKTGNFQQFE 53
           Y  S WNW T     N  SW     L+  + +  L G+     TT   +    G F+ F 
Sbjct: 155 YIDSAWNWTTLVDKVNQSSWRAHIVLTAADGQKRLGGMHRPTTTTKGNKVFLLGGFEFFN 214

Query: 54  QTKTYQIVDLTIEGIHFSAFD-LGGHDIARQSWQD 87
           + ++  +  L ++ +  +A +  GG    R SW D
Sbjct: 215 EHESIILDSLHLKLVVGTATNSTGGKPSERISWDD 249



>EAY10653.1 on XP_808562   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 755

 Score = 23.9 bits (50), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 10/95 (10%)

Query: 3   YFSSVWNWLT-----NVLSWLG---LSNKNAKMLLLGLDNAGKTTLL-QCLKTGNFQQFE 53
           Y  S WNW T     N  SW     L+  + +  L G+     TT   +    G F+ F 
Sbjct: 155 YIDSAWNWTTLVDKVNQSSWRAHIVLTAADGQKRLGGMHRPTTTTKGNKVFLLGGFEFFN 214

Query: 54  QTKTYQIVDLTIEGIHFSAFD-LGGHDIARQSWQD 87
           + ++  +  L ++ +  +A +  GG    R SW D
Sbjct: 215 EHESIILDSLHLKLVVGTATNSTGGKPSERISWDD 249



>EAY10653.1 on XP_808161   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 885

 Score = 23.9 bits (50), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 13/53 (24%)

Query: 29  LLGLDNAGKTTLL-------------QCLKTGNFQQFEQTKTYQIVDLTIEGI 68
           L+GL   GKTTLL               L    F ++E  KTY +V    +G+
Sbjct: 530 LMGLKKMGKTTLLGLSYDNNMEWSVEHGLYPNYFAKWELDKTYHVVLKMHDGV 582



>EAY10653.1 on XP_821388   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 907

 Score = 23.9 bits (50), Expect = 9.0,   Method: Composition-based stats.
 Identities = 9/28 (32%), Positives = 15/28 (53%)

Query: 78  HDIARQSWQDYYVNANAIVFMVDAAAPD 105
           ++ +  +W+D Y+  NA V   D A  D
Sbjct: 519 NNFSENTWRDEYLGVNATVKKKDGATED 546



>EAY10653.1 on XP_807541   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 920

 Score = 23.9 bits (50), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 13/53 (24%)

Query: 29  LLGLDNAGKTTLLQCLKTGNFQ-------------QFEQTKTYQIVDLTIEGI 68
           L+GL+  GKTTLL      N +             ++E  KTY +V    +G+
Sbjct: 568 LMGLEKMGKTTLLGLSYDNNMEWSVVHGSYLRYLTKWELDKTYHVVLKMHDGV 620



>EAY10653.1 on XP_813587   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 751

 Score = 23.5 bits (49), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 13/53 (24%)

Query: 29  LLGLDNAGKTTLLQ---------CLKTGNFQQF----EQTKTYQIVDLTIEGI 68
           L+GL   GKTTLL           +  G++Q +    E  KTY +V    +G+
Sbjct: 401 LMGLKKMGKTTLLGLSYDNNMEWSVVHGSYQSYFAKWELDKTYHVVLKMHDGV 453




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10654.1 hypothetical protein TVAG_157310 [Trichomonas
vaginalis G3]
         (219 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351877  PfEMP1  (Establishment)  [Plasmodium falciparum]         29   0.30 
XP_965999  PfEMP1  (Establishment)  [Plasmodium falciparum]            27   1.1  
XP_817842   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   1.6  
XP_845637  VSG  (Establishment)  [Trypanosoma brucei]                  25   4.7  
XP_001350798  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   9.0  

>EAY10654.1 on XP_001351877  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2270

 Score = 28.9 bits (63), Expect = 0.30,   Method: Composition-based stats.
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)

Query: 31   EYGDSEFNADPQPAPAQPA-PSRPNPHPRRVVRRVIVSP 68
            E  D+E    P+ APA+P    RP   PR V+    V P
Sbjct: 1756 EQADTEKKVPPKAAPARPKDKKRPKRQPRNVLEHPAVIP 1794



>EAY10654.1 on XP_965999  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 1325

 Score = 26.9 bits (58), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 9/89 (10%)

Query: 54  NPHPRRVVRRVIVSPFNFFG-------GLPGMGGNGNQPNGLADMFNNILEGIFGRIGGD 106
           N HP R    V ++    F        G      N N  NGL ++F  I EG   +  G 
Sbjct: 175 NNHPNRGSSEVCIALARSFADIGDIVRGKDMFKSNDNVENGLREVFKKIYEGFLDK--GA 232

Query: 107 NQNGDGRQMGDFFFGNEEQWQALADRLFR 135
            ++    + G++    E+ W A  D++++
Sbjct: 233 REHYKEVKNGNYIKLREDWWTANRDQVWK 261



>EAY10654.1 on XP_817842   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 897

 Score = 26.2 bits (56), Expect = 1.6,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 21/45 (46%)

Query: 102 RIGGDNQNGDGRQMGDFFFGNEEQWQALADRLFRLNQQSLGSPPT 146
           R G D++N +   +    + NE++W+ L          S+G P T
Sbjct: 605 RAGSDDENTENSVLFGLSYNNEKKWKLLCGGATTKELSSIGEPGT 649



>EAY10654.1 on XP_845637  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 499

 Score = 24.6 bits (52), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 23/107 (21%), Positives = 43/107 (40%), Gaps = 17/107 (15%)

Query: 92  FNNILEGIFGRIGGDNQNGDGRQMG--DFFFGNE--------------EQWQALADRLFR 135
            +N ++  FG+   D + G  +Q+   DF    E              +  +  A+++  
Sbjct: 305 IDNAIDKYFGKKDSDGKRGIIKQLEKEDFKIKTESSTKPTALLDMALDDTIRLTAEKIVE 364

Query: 136 LNQQSLGSPP-TADDFLSSDSMKPVKYTPGCCAENVCSICLEEFNEN 181
           L +Q++ S   T D  +++D    +K    C A   CS    E + N
Sbjct: 365 LRKQAVTSEKQTCDTPVNADGCNEIKIEEDCNATAACSFNKTETDNN 411



>EAY10654.1 on XP_001350798  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2359

 Score = 23.9 bits (50), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 4/45 (8%)

Query: 91  MFNNILEGIFGRIGGDNQNGDGRQMGDFFFGNEEQWQALADRLFR 135
           +F  I EG+ G +  +    DG   GDFF   E+ W A  + +++
Sbjct: 219 IFGKIYEGLTGGVK-ERYTNDG---GDFFQLREDWWTANRETVWK 259




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10655.1 hypothetical protein TVAG_157320 [Trichomonas
vaginalis G3]
         (180 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10659.1 hypothetical protein TVAG_157360 [Trichomonas
vaginalis G3]
         (225 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001349513  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   2.7  
AAY44831  MSA-1  (Invasion)  [Babesia bovis]                           25   3.8  
AAV98582  CP4  (Cysteine protease)  [Trichomonas vaginalis]            25   4.1  
CAA54438  CP1  (Cysteine protease)  [Trichomonas vaginalis]            25   4.9  

>EAY10659.1 on XP_001349513  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2858

 Score = 25.8 bits (55), Expect = 2.7,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 5/42 (11%)

Query: 20  FPPS--CNHVYRFEYNSPEKVIFE---INLVEANVYSDQSIA 56
           + PS  CN  +RF+ N+P+K  ++    +L + N +SD+  A
Sbjct: 70  YAPSNPCNFDFRFDTNAPDKGSYDRDPCHLRDTNRFSDKGDA 111



>EAY10659.1 on AAY44831  MSA-1  (Invasion)  [Babesia bovis]
          Length = 310

 Score = 25.0 bits (53), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 2/49 (4%)

Query: 176 SPQYMGQPPGGVNAQQPIYPPPQINYPRVPAPGQPPPG-SNSQ-WGGQP 222
           +P  +  PP  + A      PPQ +   +P PG  P G S SQ  GGQP
Sbjct: 220 TPDSLTVPPEELIASIEREAPPQGDSTGLPGPGAQPTGPSTSQSAGGQP 268



>EAY10659.1 on AAV98582  CP4  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 255

 Score = 24.6 bits (52), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 10/48 (20%), Positives = 23/48 (47%)

Query: 107 GNMLVKPKWQIPDYLWRLNPQAPNQNTYSNIRYPMSQQTAGPMYPAQY 154
           GNM    ++Q    +W  N +   ++  +N+ + ++      + PA+Y
Sbjct: 19  GNMFTGEEYQTRLGIWLSNKRLVQEHNRANLGFTVALNKLAHLTPAEY 66



>EAY10659.1 on CAA54438  CP1  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 255

 Score = 24.6 bits (52), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 10/48 (20%), Positives = 23/48 (47%)

Query: 107 GNMLVKPKWQIPDYLWRLNPQAPNQNTYSNIRYPMSQQTAGPMYPAQY 154
           GNM    ++Q    +W  N +   ++  +N+ + ++      + PA+Y
Sbjct: 6   GNMFTGEEYQTRLGIWLSNKRLVQEHNRANLGFTVALNKLAHLTPAEY 53




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10664.1 Clan SC, family S33, methylesterase-like
serine peptidase [Trichomonas vaginalis G3]
         (270 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_804892   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   5.5  

>EAY10664.1 on XP_804892   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1046

 Score = 25.0 bits (53), Expect = 5.5,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 24/58 (41%), Gaps = 1/58 (1%)

Query: 114 PVTLIGFS-DGAYITYFFAAQYPELTEKIVCIGAGEWKKNWRVIPEFEVFRKRDELYW 170
           P+ L+G   +    T  F   Y    + +   G GE+  +W     ++V  + D  YW
Sbjct: 587 PIPLMGVRMNDTSSTVLFGLSYTHDKKWLAIPGDGEYFDDWEPNRAYQVVLRMDYYYW 644




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10669.1 hypothetical protein TVAG_157460 [Trichomonas
vaginalis G3]
         (324 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_803952   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   4.9  
XP_820184   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   7.0  
XP_812042   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   8.0  
XP_818689   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   9.5  
XP_803397   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   9.8  

>EAY10669.1 on XP_803952   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 200

 Score = 25.0 bits (53), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 15/65 (23%), Positives = 32/65 (49%)

Query: 115 IELYDESTNKSYAFECSVSQCKGDIKVSNMNTSNHYEITECAAYRIHSSKEAEIINFTTI 174
           +E  D ++ ++ + + S++  K D +  +   +++   TE A + +  SKE      T  
Sbjct: 72  LEAGDGNSERTMSSDSSLTPSKSDAEPRSAEDTDNISWTERAEFSVEDSKEVPQTVDTAP 131

Query: 175 SNTSS 179
            NTS+
Sbjct: 132 GNTST 136



>EAY10669.1 on XP_820184   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1050

 Score = 25.0 bits (53), Expect = 7.0,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 34/65 (52%)

Query: 115 IELYDESTNKSYAFECSVSQCKGDIKVSNMNTSNHYEITECAAYRIHSSKEAEIINFTTI 174
           +E  D S+ ++ + + S++  K D + ++   +++   TE A + + + +EA     T  
Sbjct: 922 LEARDGSSERTMSSDSSLTPSKSDAEPTSAEDTDNISRTEEAEFLVENGEEAPQTVETAS 981

Query: 175 SNTSS 179
            NT++
Sbjct: 982 GNTNT 986



>EAY10669.1 on XP_812042   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 227

 Score = 24.6 bits (52), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 8/21 (38%), Positives = 10/21 (47%)

Query: 206 NGDAIIWCDTSCTYSNCSFIG 226
           NGD  +  +  CT   C F G
Sbjct: 104 NGDVFVVAEAQCTTKGCGFTG 124



>EAY10669.1 on XP_818689   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 844

 Score = 24.6 bits (52), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 9/24 (37%), Positives = 12/24 (50%)

Query: 203 DTNNGDAIIWCDTSCTYSNCSFIG 226
           +TN+GD     +  CT   C F G
Sbjct: 102 ETNDGDVFAVVEAQCTKDECGFTG 125



>EAY10669.1 on XP_803397   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 376

 Score = 24.3 bits (51), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 15/65 (23%), Positives = 32/65 (49%)

Query: 115 IELYDESTNKSYAFECSVSQCKGDIKVSNMNTSNHYEITECAAYRIHSSKEAEIINFTTI 174
           +E  D ++ ++ + + S++  K D +  +   +++   TE A + +  SKE      T  
Sbjct: 247 LEAGDGNSERTMSSDSSLTPSKSDAEPRSAEDTDNISWTEGAEFSVEDSKEVPQTVDTAP 306

Query: 175 SNTSS 179
            NTS+
Sbjct: 307 GNTST 311




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10673.1 hypothetical protein TVAG_157500 [Trichomonas
vaginalis G3]
         (133 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10678.1 hypothetical protein TVAG_157550 [Trichomonas
vaginalis G3]
         (50 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 21   4.3  

>EAY10678.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 21.2 bits (43), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 9/16 (56%), Positives = 12/16 (75%)

Query: 20   ISHNIDFVTFLMNEFD 35
            IS+NID V+  +NE D
Sbjct: 2055 ISNNIDIVSNKLNEID 2070




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10683.1 hypothetical protein TVAG_157600 [Trichomonas
vaginalis G3]
         (180 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAW78208  CSP  (Invasion)  [Plasmodium falciparum]                     25   2.4  
XP_808156   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   4.7  
XP_001350797  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   7.7  

>EAY10683.1 on AAW78208  CSP  (Invasion)  [Plasmodium falciparum]
          Length = 374

 Score = 25.4 bits (54), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 12/35 (34%), Positives = 22/35 (62%)

Query: 29  DQTDANLLVKDIQDEKMVDRKVSKLLKLLIDRLST 63
           +  +AN  VK+  +E+  D+ + K LK++ + LST
Sbjct: 272 ENANANDAVKNNNNEEPSDQHIEKYLKIIKNSLST 306



>EAY10683.1 on XP_808156   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1058

 Score = 24.6 bits (52), Expect = 4.7,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 39/90 (43%)

Query: 39  DIQDEKMVDRKVSKLLKLLIDRLSTLNRGLHSNETVLDQKQYTDFQSSYKIKSLNDLYNP 98
           D Q+E+  D  V       +   S+++    + E+  +  Q  +FQ S    +     N 
Sbjct: 767 DKQEEESADDPVPAAPSFTVVAGSSVSEPAIAVESAGNSHQENNFQLSEGKTAQQATLNE 826

Query: 99  IRTNSRNDAYSQGNTLPTTKRSIIEEIDKS 128
              + + D+  Q   LP+TK + I +++ S
Sbjct: 827 DNKSMQRDSEVQPRELPSTKSTEIADVEGS 856



>EAY10683.1 on XP_001350797  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2287

 Score = 23.9 bits (50), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 7/80 (8%)

Query: 88  KIKSLNDLYNPIRTNSRNDAYSQGNTLPTTKR-------SIIEEIDKSRSLSSMQSQIAE 140
           K K LND+    R ++  D Y  GN    TK        +I +E  K      M     +
Sbjct: 328 KNKKLNDVKKQCRGDNGTDRYCSGNGYDCTKTIRAIGKYAIGDECTKCSFWCRMYETWID 387

Query: 141 DLQEQLLDVQDQLTKLRQKY 160
           + +++ L  + +  K  +KY
Sbjct: 388 NQKKEFLKQKRKYDKEIEKY 407




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10694.1 hypothetical protein TVAG_364170 [Trichomonas
vaginalis G3]
         (400 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_802978   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           35   0.005
XP_810574   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           32   0.049
ABR92024  MSA-1  (Invasion)  [Babesia bovis]                           32   0.066
XP_806519   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           32   0.067
XP_808394   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.32 
XP_815479   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.33 
XP_803401  VSG  (Establishment)  [Trypanosoma brucei]                  27   2.5  
XP_829779  VSG  (Establishment)  [Trypanosoma brucei]                  27   2.7  
XP_820458   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   3.7  
AAL15427  MSA-2b  (Invasion)  [Babesia bovis]                          26   4.2  
AAL15422  MSA-2a2  (Invasion)  [Babesia bovis]                         25   6.7  
XP_001347691  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   8.0  
ABA06450  MSA-2a1  (Invasion)  [Babesia bovis]                         25   9.9  
XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]                 25   9.9  

>EAY10694.1 on XP_802978   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 340

 Score = 35.0 bits (79), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 19/166 (11%)

Query: 245 LHDGIASC----PTLQYVSLLNNFEVPEGIPE-------KFCELVQSKPLGECVLTVKMD 293
           +HDG+ S       L  +SL N+F   EG+          + E + S  +   V  V + 
Sbjct: 108 MHDGVGSVYVDGTLLWNMSLRNSFN--EGLDTVSHFYFGAYDEQLSSGKIHATVANVFLY 165

Query: 294 TFFFQNMKAYSL-TNKRKMVKEAKRLAREARKNKGTSTAPPTQPEGTTAPASANATQPTT 352
                  +  +L  NK  +    ++ A+E       +T+PP +P   T   +A AT P  
Sbjct: 166 NRPLNETEIGALNANKVSIPPPERKPAKEV-----AATSPPVEPANDTVTTNAQATAPAP 220

Query: 353 QTPSQQPTEAPSGSTSARPTSPAPSSSLSTRAQLGTPNLQEAEEGP 398
                QPT+  +   S+ P+  APS++   RAQ      + A++ P
Sbjct: 221 TPAGPQPTDQATLDASSVPSGGAPSATARGRAQQSPNKRRRAQQSP 266



>EAY10694.1 on XP_810574   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 954

 Score = 32.3 bits (72), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 31/62 (50%)

Query: 328 TSTAPPTQPEGTTAPASANATQPTTQTPSQQPTEAPSGSTSARPTSPAPSSSLSTRAQLG 387
           T+T+PP +P  T+       T P+  T   QPTE  + + S+ P+  APS+     A   
Sbjct: 739 TTTSPPVEPLTTSVTTEMQPTVPSPATAGPQPTEQATLNGSSVPSGGAPSTPEELNAATS 798

Query: 388 TP 389
           TP
Sbjct: 799 TP 800



>EAY10694.1 on ABR92024  MSA-1  (Invasion)  [Babesia bovis]
          Length = 330

 Score = 31.6 bits (70), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 4/69 (5%)

Query: 333 PTQPEGTTAPASA--NATQPTTQTPSQQPTEAPSGSTSARPTSPAPSSSLSTRAQLGTPN 390
           PT PE T  PA A   A++PT  +P  QPT   +    A  T PA   + ST+ +    N
Sbjct: 242 PTNPENTELPAQAAPGASEPT--SPGGQPTAPAAPQPGASATEPAQEPAPSTKPEQPAGN 299

Query: 391 LQEAEEGPK 399
           L   +  PK
Sbjct: 300 LSGQQGSPK 308




 Score = 30.4 bits (67), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 7/52 (13%)

Query: 333 PTQPEGT-TAPAS----ANATQPTTQ-TPSQQPTEAPSGSTSARPTSPAPSS 378
           PT P G  TAPA+    A+AT+P  +  PS +P E P+G+ S +  SP P+S
Sbjct: 261 PTSPGGQPTAPAAPQPGASATEPAQEPAPSTKP-EQPAGNLSGQQGSPKPAS 311



>EAY10694.1 on XP_806519   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 912

 Score = 32.0 bits (71), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 17/52 (32%), Positives = 26/52 (50%)

Query: 332 PPTQPEGTTAPASANATQPTTQTPSQQPTEAPSGSTSARPTSPAPSSSLSTR 383
           PP +P   T   S  AT P+      QPTE  + + S+ P+   PS++  +R
Sbjct: 707 PPVEPANDTVTTSTQATVPSLTPAGTQPTEQATVNASSVPSGSTPSTTAESR 758



>EAY10694.1 on XP_808394   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 912

 Score = 29.6 bits (65), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 16/48 (33%), Positives = 24/48 (50%)

Query: 332 PPTQPEGTTAPASANATQPTTQTPSQQPTEAPSGSTSARPTSPAPSSS 379
           PP +P   T   S  AT P+      QPTE  + + S+ P+   PS++
Sbjct: 707 PPVEPANDTVTTSTQATVPSLTPAGTQPTEQATLNASSVPSGSTPSTT 754



>EAY10694.1 on XP_815479   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1047

 Score = 29.6 bits (65), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 18/67 (26%), Positives = 31/67 (46%)

Query: 329 STAPPTQPEGTTAPASANATQPTTQTPSQQPTEAPSGSTSARPTSPAPSSSLSTRAQLGT 388
           + +P T   G++ P  A AT+    + S+   +   G TS + T    + S+   ++L T
Sbjct: 769 AASPSTDAAGSSVPEPATATESAGNSRSEDNAQLSEGETSQQATLNEDNESMQRDSELQT 828

Query: 389 PNLQEAE 395
             LQ  E
Sbjct: 829 QELQSEE 835



>EAY10694.1 on XP_803401  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 493

 Score = 26.6 bits (57), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 5/63 (7%)

Query: 278 VQSKPLGECVLTVKMDTFFFQNMKAYSLTNKRKMVKEAKRLAREARKNKGTSTAPPTQPE 337
             +K LG+     ++   +F     YS  NK+K+ + AK+L +EA   K T +A   + E
Sbjct: 357 TDAKSLGQITDISELLRLYFY----YSDLNKQKLAETAKKL-QEAEFKKETKSAKEKEKE 411

Query: 338 GTT 340
           G T
Sbjct: 412 GNT 414



>EAY10694.1 on XP_829779  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 486

 Score = 26.6 bits (57), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 5/51 (9%)

Query: 319 AREARKNKGTSTAPPTQPEGTTAPASANATQPTTQTPSQQP----TEAPSG 365
           A  A+   GT+TA  T   G +  +    T PTTQ PS +P    TEA SG
Sbjct: 128 AEHAKLTPGTATASQTSQPGVSTNSDEQCTVPTTQ-PSAKPDTCDTEAGSG 177



>EAY10694.1 on XP_820458   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 923

 Score = 26.2 bits (56), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 13/57 (22%)

Query: 332 PPT---QPEGT--------TAPASANATQPTTQTPSQQPTE--APSGSTSARPTSPA 375
           PP+   QP+G+        + PA++ A   + Q P +QPT   +PSG+ +A  TS +
Sbjct: 772 PPSEQGQPKGSNGAGAGGASTPATSTAAASSGQEPVKQPTSGTSPSGNKNADGTSSS 828



>EAY10694.1 on AAL15427  MSA-2b  (Invasion)  [Babesia bovis]
          Length = 287

 Score = 25.8 bits (55), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 1/47 (2%)

Query: 329 STAPPTQPEGTTAPASANATQPTTQTPSQQP-TEAPSGSTSARPTSP 374
           S  P TQ      PA+ N +QP T      P   APS +++  PT P
Sbjct: 206 SPIPSTQGTPGAQPAAPNTSQPDTPAAQSHPGPAAPSTTSADHPTKP 252



>EAY10694.1 on AAL15422  MSA-2a2  (Invasion)  [Babesia bovis]
          Length = 292

 Score = 25.4 bits (54), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 8/65 (12%)

Query: 327 GTSTAPPTQPEGTTAPASANATQPTTQTPSQQPTEAPSGSTSARPTSPAPSSSLSTRAQL 386
           GT  AP   P+G TA + + A  PT      +PT+ P G+   +  +  P+ S  T   L
Sbjct: 228 GTPAAP--SPQGPTAESPSQADHPT------KPTQTPEGNLQGQQGTTKPAGSSFTYGGL 279

Query: 387 GTPNL 391
               L
Sbjct: 280 TVATL 284



>EAY10694.1 on XP_001347691  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2182

 Score = 25.4 bits (54), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 11/20 (55%), Positives = 15/20 (75%)

Query: 354 TPSQQPTEAPSGSTSARPTS 373
           TPS +P EAPSG ++A  +S
Sbjct: 921 TPSGKPGEAPSGDSTATGSS 940



>EAY10694.1 on ABA06450  MSA-2a1  (Invasion)  [Babesia bovis]
          Length = 316

 Score = 24.6 bits (52), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 8/65 (12%)

Query: 327 GTSTAPPTQPEGTTAPASANATQPTTQTPSQQPTEAPSGSTSARPTSPAPSSSLSTRAQL 386
           GT  AP   P+G TA + + A  PT      +PT+ P G+   +  +  P+ S  T   L
Sbjct: 252 GTPAAP--SPQGPTAESPSQADHPT------KPTQTPEGNLQGQQGTTKPAGSSFTYGGL 303

Query: 387 GTPNL 391
               L
Sbjct: 304 TVATL 308



>EAY10694.1 on XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]
          Length = 2112

 Score = 25.0 bits (53), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 2/49 (4%)

Query: 332 PPTQPEGTT--APASANATQPTTQTPSQQPTEAPSGSTSARPTSPAPSS 378
           PP  P  +T  +P+ +    P+  TP       P   + + P SP+ S+
Sbjct: 762 PPGSPSESTPGSPSESTPGSPSESTPGSPSESTPGNPSESTPGSPSEST 810




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10695.1 hypothetical protein TVAG_364180 [Trichomonas
vaginalis G3]
         (81 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_816853   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   2.0  
XP_815807   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   2.4  
XP_804289   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   9.5  

>EAY10695.1 on XP_816853   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1044

 Score = 23.5 bits (49), Expect = 2.0,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 20/39 (51%)

Query: 7   SNNNEPPNDPSEPDREETSDIKTPSSKNTQFRAGSLTDP 45
           S +N   +D ++   EETS   TP+ +N   + GS   P
Sbjct: 789 SADNSRSDDNAQLSEEETSWQDTPNEENKSMQRGSDLQP 827



>EAY10695.1 on XP_815807   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 899

 Score = 23.1 bits (48), Expect = 2.4,   Method: Composition-based stats.
 Identities = 8/31 (25%), Positives = 18/31 (58%)

Query: 12  PPNDPSEPDREETSDIKTPSSKNTQFRAGSL 42
           PP+ P+ P+ ++T    TP+ ++   +  S+
Sbjct: 747 PPSHPATPNAQKTEASSTPAGRHPMEQGQSM 777



>EAY10695.1 on XP_804289   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1048

 Score = 21.6 bits (44), Expect = 9.5,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 21/48 (43%)

Query: 15  DPSEPDREETSDIKTPSSKNTQFRAGSLTDPFFTPNFDDNSQDAKDNS 62
           D  E   EE+  I  P++ ++   AGS      T      +  ++DN+
Sbjct: 755 DDLEKQEEESVHILVPAASSSTVAAGSFVSELATATESAGNSRSEDNA 802




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10704.1 hypothetical protein TVAG_364280 [Trichomonas
vaginalis G3]
         (88 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_805883   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   0.78 
XP_829761  VSG  (Establishment)  [Trypanosoma brucei]                  23   3.3  
XP_805548   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   4.3  
XP_816853   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   7.1  

>EAY10704.1 on XP_805883   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1038

 Score = 25.0 bits (53), Expect = 0.78,   Method: Composition-based stats.
 Identities = 10/22 (45%), Positives = 15/22 (68%)

Query: 14  LNSDNEKKPSGLGAKPTPKPNT 35
           +NSD+   PSG+ A+PT   +T
Sbjct: 921 MNSDSSPTPSGIDAEPTSAEDT 942



>EAY10704.1 on XP_829761  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 477

 Score = 23.1 bits (48), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 13/40 (32%), Positives = 22/40 (55%)

Query: 14  LNSDNEKKPSGLGAKPTPKPNTLSKVPVTQAAPKQKQDTK 53
           LN+   K  +  G K T +  TLS +    AA ++K+D++
Sbjct: 274 LNAIEGKAGAAAGNKSTEQLATLSTLASRAAASQEKKDSE 313



>EAY10704.1 on XP_805548   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1044

 Score = 22.7 bits (47), Expect = 4.3,   Method: Composition-based stats.
 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)

Query: 14  LNSDNEKKPSGLGAKPTPKPNTLSKVPVTQAA 45
           +NSD+   PS   A+PT   +T   VP T+ A
Sbjct: 927 MNSDSSSTPSKRDAEPTSAEDT-EDVPWTERA 957



>EAY10704.1 on XP_816853   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1044

 Score = 21.9 bits (45), Expect = 7.1,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 14/22 (63%)

Query: 14  LNSDNEKKPSGLGAKPTPKPNT 35
           +NSD+   PSG+ A+P    +T
Sbjct: 929 MNSDSSLTPSGIDAEPRSAEDT 950




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10705.1 hypothetical protein TVAG_364290 [Trichomonas
vaginalis G3]
         (1533 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_807804   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           37   0.007
XP_819719   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           33   0.18 
XP_844694  VSG  (Establishment)  [Trypanosoma brucei]                  31   0.50 
XP_809489   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           31   0.64 
XP_806239   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.92 
XP_811703   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   6.3  

>EAY10705.1 on XP_807804   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1054

 Score = 37.4 bits (85), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 19/142 (13%)

Query: 760 SESEKEKKENSEKEENQKSEKEKSISDDFASERSKEKENSFEKEEKQNEEEKPPQLSIVS 819
           S+  K+ ++ S +EEN+K+    + SD  A   +K +E   EK     ++  PP    +S
Sbjct: 783 SQQRKDAQDRSSEEENKKTAASATYSDSHAVADTKRREEQMEKAANDVDDLPPP----LS 838

Query: 820 SVNKALNENESPEKEEEKEFDSFNEEEQKKEEEK--PLLGLSNVIKDTLTKPVEEEEKKE 877
              +A + ++SP+ E     D+   E  ++EEE   P++  S V  D      E  E  E
Sbjct: 839 PAPEAASGHKSPDAE-----DALGVEHPEQEEESLLPIVAGSTV--D------EASEMDE 885

Query: 878 EIPQEKSNEDSQKEKEFDAFNE 899
            IPQ ++++D  ++      +E
Sbjct: 886 AIPQSRTSDDPAQQTTLPLLSE 907



>EAY10705.1 on XP_819719   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1053

 Score = 32.7 bits (73), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 67/142 (47%), Gaps = 19/142 (13%)

Query: 760 SESEKEKKENSEKEENQKSEKEKSISDDFASERSKEKENSFEKEEKQNEEEKPPQLSIVS 819
           S+  K+ ++ S +EEN+K+    + SD  A   +K +E   EK     ++  PP    +S
Sbjct: 782 SQQRKDAQDRSSEEENKKTAASATYSDSHAVADTKRREEQMEKAANDVDDLPPP----LS 837

Query: 820 SVNKALNENESPEKEEEKEFDSFNEEEQKKEEEK--PLLGLSNVIKDTLTKPVEEEEKKE 877
              +A + ++SP+ E     D+   E  ++EEE   P++  S V  D      E  E  E
Sbjct: 838 PAPEAASGHKSPDAE-----DALGVEHPEQEEESLLPIVAGSTV--D------ETSEMDE 884

Query: 878 EIPQEKSNEDSQKEKEFDAFNE 899
            I Q ++++D  ++      +E
Sbjct: 885 AILQSRTSDDPAQQTTLPLLSE 906



>EAY10705.1 on XP_844694  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 491

 Score = 31.2 bits (69), Expect = 0.50,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 42/89 (47%)

Query: 695 DKQKNSDVNKPESEKESKKSSEHEEEKKSESDKKSENSSQHESKQENEEKKSNSEKDPFS 754
           +KQK +D  K   E E+K +++  EEK+ E + K ++      K +++    N + D   
Sbjct: 382 NKQKLADTAKKPREAEAKTATKSAEEKEKECNTKGKDKQDGCEKLKDQGCVFNKDGDRDK 441

Query: 755 DEFNQSESEKEKKENSEKEENQKSEKEKS 783
                 E +KE  + +E +E  K  K  +
Sbjct: 442 KCTLSKEGKKEAVKAAESKETNKDGKTNT 470



>EAY10705.1 on XP_809489   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 787

 Score = 30.8 bits (68), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 53/217 (24%), Positives = 89/217 (41%), Gaps = 39/217 (17%)

Query: 686 KEEEEKKLSDKQKNSDVNKPESEKESKKS---SEHEEEKKSESDKKSENSSQHESKQENE 742
           K++E K L+   K   V  PE+   S K    S H  E   + D  SE S   E KQ+  
Sbjct: 460 KDDELKALT---KADAVGTPEANVPSLKGAPQSTHASETLIQPD--SETSVIKEVKQDA- 513

Query: 743 EKKSNSEKDPFSDEFNQSESEKEKKENSEKEENQKSEKEKSISDDFASERSKEKENSFEK 802
                            S+  ++  +   +E+N+K+    + SD  A   +K +E   EK
Sbjct: 514 ---------------TSSQQRQDAPDRPPEEKNKKAAASVTYSDSHAVADTKRREEQMEK 558

Query: 803 EEKQNEEEKPPQLSIVSSVNKALNENESPEKEEEKEFDSFNEEEQKKEEEKPLLGLSNVI 862
                ++  PP    +S   +A N ++SP+ E     D+   E  ++EEE  L  ++   
Sbjct: 559 AATDVDDLPPP----LSPAPEAANGHKSPDAE-----DALGVEHPEQEEESLLPIVAGST 609

Query: 863 KDTLTKPVEEEEKKEEIPQEKSNEDSQKEKEFDAFNE 899
            D      E  E  E I Q ++++D  ++      +E
Sbjct: 610 VD------ETSETDEAILQSRTSDDPAQQTTLPLVSE 640



>EAY10705.1 on XP_806239   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 475

 Score = 30.4 bits (67), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 90/219 (41%), Gaps = 43/219 (19%)

Query: 686 KEEEEKKLSDKQKNSDVNKPESEKESKKS---SEHEEEKKSESDKKSENSSQHESKQENE 742
           K++E K L+   K   V  PE+   S K    S H  E   + D  SE S   E KQ+  
Sbjct: 148 KDDELKALT---KADAVGTPEANVPSLKGAPQSTHASETLIQPD--SETSVIKEVKQDA- 201

Query: 743 EKKSNSEKDPFSDEFNQSESEKEKKENSEKEENQKSEKEKSISDDFASERSKEKENSFEK 802
                            S+  ++  +   +E+N+K+    + SD  A   +K +E   EK
Sbjct: 202 ---------------TSSQQRQDAPDRPPEEKNKKAAASVTYSDSHAVADTKRREEQMEK 246

Query: 803 EEKQNEEEKPPQLSIVSSVNKALNENESPEKEEEKEFDSFNEEEQKKEEEK--PLLGLSN 860
                ++  PP    +S   +A N ++SP+ E     D+   E  ++EEE   P++  S 
Sbjct: 247 AATDVDDLPPP----LSPAPEAANGHKSPDAE-----DALGVEHPEQEEESLLPIVAGST 297

Query: 861 VIKDTLTKPVEEEEKKEEIPQEKSNEDSQKEKEFDAFNE 899
           V         E  E  E I Q ++++D  ++      +E
Sbjct: 298 VD--------ETSETDEAILQSRTSDDPAQQTTLPLVSE 328



>EAY10705.1 on XP_811703   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1043

 Score = 27.7 bits (60), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)

Query: 682 DSEKKEEEEK-------KLSDKQKNSDVNKPESEKESKKSSEHEEEKKSESDKKSENSSQ 734
           D+EK+EEE          LS     S V++P +  E   +S  E+  +   DK S+ ++ 
Sbjct: 750 DTEKQEEESADGVVLAPLLSTFAGGSSVSEPATATEIAGNSRPEDNVQLSEDKTSQQTTP 809

Query: 735 HESKQENEEKKSNSEKDP 752
           HE+K+  +       +DP
Sbjct: 810 HEAKESMQRDSDVQPQDP 827




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10707.1 hypothetical protein TVAG_364310 [Trichomonas
vaginalis G3]
         (220 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609101  variant erythrocyte surface antigen-1, alpha subun...    28   0.35 
XP_001609163  variant erythrocyte surface antigen-1, alpha subun...    27   0.78 
XP_001609666  variant erythrocyte surface antigen-1, alpha subun...    25   3.6  

>EAY10707.1 on XP_001609101  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1359

 Score = 28.5 bits (62), Expect = 0.35,   Method: Composition-based stats.
 Identities = 34/151 (22%), Positives = 63/151 (41%), Gaps = 22/151 (14%)

Query: 72  KYVEAQSRAIEDLNDIQERFLVVVRSSARSSEAHANLKRTTEALDLAKQKLEIEKSK--- 128
           K VE     ++ L +I+       ++   + E     K+T EAL+ AK +LE  K     
Sbjct: 728 KLVEGVKEKVKALEEIK-------KTLEAAKEKLEEAKKTQEALEAAKGELEGAKGALTT 780

Query: 129 -------NSSKVQKMEAYVEECREQKKQAIENLKTAIKSYIEEKKK-FNAFRDRRMKQSY 180
                  +SS +   +  V    +   +A++ LK A++  +E  +K    F+D     +Y
Sbjct: 781 AKKAFPGSSSDIDPCKNIVSATIDGLHKALQLLKDAVQQIMEATRKDTTEFQDAIFSATY 840

Query: 181 STYGATTVSFSNTLSQI----YSDMKASIED 207
           +    T V       ++     S + ++IED
Sbjct: 841 TADVVTEVEKHQAKQKVTLDALSTLVSAIED 871



>EAY10707.1 on XP_001609163  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1360

 Score = 27.3 bits (59), Expect = 0.78,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 15/114 (13%)

Query: 109 KRTTEALDLAKQKLEIEKSK----------NSSKVQKMEAYVEECREQKKQAIENLKTAI 158
           K+T EAL+ AK +LE  K            +SS +   +  V    +   +A++ LK A+
Sbjct: 758 KKTQEALEAAKGELEGAKGALTTAKKAFPGSSSDIDPCKNIVSATIDGLHKALQLLKDAV 817

Query: 159 KSYIEEKKK-FNAFRDRRMKQSYSTYGATTVSFSNTLSQI----YSDMKASIED 207
           +  +E  +K    F+D     +Y+    T V       ++     S + ++IED
Sbjct: 818 QQIMEATRKDTTEFQDAIFSATYTADVVTEVEKHQAKQKVTLDALSTLVSAIED 871



>EAY10707.1 on XP_001609666  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1269

 Score = 25.4 bits (54), Expect = 3.6,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 5/77 (6%)

Query: 71  YKYVEAQSRAIEDLNDIQERFLVVVRSSARSSEAHAN-----LKRTTEALDLAKQKLEIE 125
           +K    +    E L D+ E+   VV     + EA        +++  EAL  AK+ LE  
Sbjct: 597 WKVPSGKDTLAEKLKDVLEKIGEVVVQLGNAQEALETKDKDVIEKVKEALRKAKEGLETA 656

Query: 126 KSKNSSKVQKMEAYVEE 142
           K+    K+++ +  ++E
Sbjct: 657 KNGLKDKLEEAKKKLDE 673




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10709.1 hypothetical protein TVAG_364330 [Trichomonas
vaginalis G3]
         (197 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10711.1 hypothetical protein TVAG_364360 [Trichomonas
vaginalis G3]
         (201 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001352242  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   4.3  

>EAY10711.1 on XP_001352242  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2264

 Score = 25.0 bits (53), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 11/69 (15%)

Query: 68  KACVLTLRYIKQKIKQSKLYNGGDDIFLGYI--FKKIFKKSRKIHSYAINGAPLSTEAKK 125
           K  +  LRY KQ I  S LY    + ++ +I   +K F K ++ +   INGAP+S     
Sbjct: 370 KRAIGKLRYGKQCI--SCLY--ACNPYVEWIDNQRKQFLKQKQKYINVINGAPVS----- 420

Query: 126 RLAARDFRN 134
           R   RD RN
Sbjct: 421 RRQKRDARN 429




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10713.1 hypothetical protein TVAG_364380 [Trichomonas
vaginalis G3]
         (237 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_803397   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.1  

>EAY10713.1 on XP_803397   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 376

 Score = 26.9 bits (58), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 150 DVDTQFRDIIENLHKFAEPFESLDIEQKRFIVKQAGFAKKAMNMIIKDFIQLDKQESLNI 209
           D+D Q ++I+ +L   A    S  +     + + A  A+ A N   +D +QL + E+   
Sbjct: 82  DLDEQEKEIVHDLVPVAS---SSTVAGGSSVSEPAIAAESAGNSRQEDNVQLSEGETSPQ 138

Query: 210 DVPHVTYEKVQCANDF 225
             PH   E +Q  +D 
Sbjct: 139 TTPHEAKESMQRDSDV 154




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10715.1 CK1 family protein kinase [Trichomonas
vaginalis G3]
         (320 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    36   0.002
XP_820062   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.1  
CAD21872  ESAG-6  (Establishment)  [Trypanosoma brucei]                27   2.3  
AAA30187  ESAG-6  (Establishment)  [Trypanosoma brucei]                27   2.4  
CAD21780  ESAG-6  (Establishment)  [Trypanosoma brucei]                26   2.5  
XP_809398   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   3.6  

>EAY10715.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 35.8 bits (81), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 8/72 (11%)

Query: 93  IAQHLPEKKFAMEY----IPRLAYNLFCLVEVL---HSKGYVHRDIKPQNFVVRPKGNRP 145
           I +H+    F   Y    I  + Y ++ L++ +   HS+G +HRDIKP N ++  +  + 
Sbjct: 128 IFEHVNNTDFKTLYPTLTIQDIKYYIYQLLKAMNYCHSQGIMHRDIKPHNVMIDHE-KKI 186

Query: 146 ICLIDFGISKVY 157
           + LID+G+++ Y
Sbjct: 187 LRLIDWGLAEFY 198



>EAY10715.1 on XP_820062   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 898

 Score = 26.6 bits (57), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 9/33 (27%), Positives = 16/33 (48%)

Query: 251 GLQYADAPNYDAIRKTLEPMFNNTPSPYQWMDV 283
           G + A A       K ++P     P+PY+W ++
Sbjct: 62  GCEAASADGSSGEGKAVDPFHGTKPAPYEWHEM 94



>EAY10715.1 on CAD21872  ESAG-6  (Establishment)  [Trypanosoma brucei]
          Length = 400

 Score = 26.6 bits (57), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 9/22 (40%), Positives = 15/22 (68%)

Query: 248 HIQGLQYADAPNYDAIRKTLEP 269
           +++G +Y DA  Y A+R T +P
Sbjct: 255 YVEGGEYGDATEYGAVRWTEDP 276



>EAY10715.1 on AAA30187  ESAG-6  (Establishment)  [Trypanosoma brucei]
          Length = 400

 Score = 26.6 bits (57), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 9/22 (40%), Positives = 15/22 (68%)

Query: 248 HIQGLQYADAPNYDAIRKTLEP 269
           +++G +Y DA  Y A+R T +P
Sbjct: 255 YVEGGEYGDATEYGAVRWTEDP 276



>EAY10715.1 on CAD21780  ESAG-6  (Establishment)  [Trypanosoma brucei]
          Length = 401

 Score = 26.2 bits (56), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 9/22 (40%), Positives = 15/22 (68%)

Query: 248 HIQGLQYADAPNYDAIRKTLEP 269
           +++G +Y DA  Y A+R T +P
Sbjct: 256 YVEGGEYGDATEYGAVRWTEDP 277



>EAY10715.1 on XP_809398   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 139

 Score = 25.0 bits (53), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 7/19 (36%), Positives = 12/19 (63%)

Query: 265 KTLEPMFNNTPSPYQWMDV 283
           K ++P    TP PY+W ++
Sbjct: 72  KAVDPFQGTTPPPYKWQEM 90




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10717.1 Proteasome/cyclosome repeat family protein
[Trichomonas vaginalis G3]
         (862 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_815119   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   1.1  
XP_821677   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   1.6  
XP_808176   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   4.6  
XP_815905   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   6.9  
XP_804820   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   8.0  

>EAY10717.1 on XP_815119   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 380

 Score = 29.3 bits (64), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 6/48 (12%)

Query: 228 NTDNWLMAYQIAFD------LAENANQKLRSIIISLLPPDLPDLKSIL 269
           N  NW +A  + +       L E AN+K R+I ++ L  +L  +KS+L
Sbjct: 156 NNKNWDLASNLPYSDGALHLLKERANEKGRAISLARLTEELKTIKSVL 203



>EAY10717.1 on XP_821677   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 861

 Score = 28.9 bits (63), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 2/86 (2%)

Query: 748 EIYCNKPA-SLFAYPPPFESETESLKEREVVELSISRKTQEQKENKKEEKKEVDEKEPSY 806
           E  C K   S         + T   K +EV+E     K Q  +E+   EKK+VD   P+ 
Sbjct: 111 EAQCTKDGVSFTGIASQLLTNTADNKPKEVLE-DAKEKPQVLEEDISTEKKKVDVSRPTV 169

Query: 807 VILKNQSRVTLRQLKHLDFGYCEKYT 832
           V+  N   + + +  H D   C+  T
Sbjct: 170 VVSGNNIYMLVGKHSHEDAANCQAGT 195



>EAY10717.1 on XP_808176   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 889

 Score = 27.3 bits (59), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 21/85 (24%), Positives = 34/85 (40%)

Query: 748 EIYCNKPASLFAYPPPFESETESLKEREVVELSISRKTQEQKENKKEEKKEVDEKEPSYV 807
           E +C              S  +  + +E V  +   KTQ  +E    EKK VD   P+ V
Sbjct: 109 EAHCKGGNGFTGIASQLLSMDKGKEPKEEVLKNAKEKTQFLEEVTSTEKKRVDVSRPTTV 168

Query: 808 ILKNQSRVTLRQLKHLDFGYCEKYT 832
           + +N   + + +  H   G C+  T
Sbjct: 169 VKENDIYMLVGKHSHDAAGSCKAGT 193



>EAY10717.1 on XP_815905   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 888

 Score = 26.6 bits (57), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 17/57 (29%), Positives = 28/57 (49%)

Query: 779 LSISRKTQEQKENKKEEKKEVDEKEPSYVILKNQSRVTLRQLKHLDFGYCEKYTPVT 835
           L  ++ TQ  +E+   EKK+VD   P+ V+  N   + + +  H D   C+  T  T
Sbjct: 144 LKDAKYTQVLEEDISMEKKKVDVSRPTTVVKGNNIYMIVGKHSHEDAANCQAGTENT 200



>EAY10717.1 on XP_804820   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 954

 Score = 26.6 bits (57), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 2/44 (4%)

Query: 295 NLKENLKTT--KMLIHSSVVCAYSLMFAGTGDDNFYRSNITWFG 336
           N++E +KTT   ++I+SS + +++L    +GD     S + W G
Sbjct: 284 NMEEEVKTTTVSLIIYSSDIASWTLSKGMSGDGCSVPSVVEWKG 327




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10719.1 hypothetical protein TVAG_364440 [Trichomonas
vaginalis G3]
         (130 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

P09194  GPI-PLC  (Others)  [Trypanosoma brucei]                        27   0.49 
XP_001611441  variant erythrocyte surface antigen-1, beta subuni...    25   1.8  
XP_001351561  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   9.3  
XP_001348946  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   9.3  

>EAY10719.1 on P09194  GPI-PLC  (Others)  [Trypanosoma brucei]
          Length = 358

 Score = 26.6 bits (57), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 7/53 (13%)

Query: 84  QEIDEIIQEIDSKIDLK-------YRPHVLISVELKKIEKEYKQILDRVKSAN 129
           Q +D  ++ +D ++++        Y  H  ISV L+++ K+ K  L    SAN
Sbjct: 87  QLLDHGVRYLDLRMNISPDQENKIYTTHFHISVPLQEVLKDVKDFLTTPASAN 139



>EAY10719.1 on XP_001611441  variant erythrocyte surface antigen-1, beta subunit 
            (Establishment)  [Babesia bovis]
          Length = 1205

 Score = 25.0 bits (53), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)

Query: 35   LEKLEEKNETLKQKSKECEQASKSCGEIL-SRDIENYGKNLKISDFMKLIQEIDEII 90
            +EK E+  E LK++ K+ +     CG +   RD   +G  +  S     I  I++++
Sbjct: 951  IEKFEKGLEGLKEEFKKVDCRGDGCGRVARRRDRGAFGATISFSTARNRIIWINDVV 1007



>EAY10719.1 on XP_001351561  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3553

 Score = 22.7 bits (47), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 13/69 (18%)

Query: 20   MLDEW-ENRIKIEELELEKLEEK-----------NETLKQKSKECEQASKSCGEILSRDI 67
             + EW E   K +  E EKLEEK            +   QK KEC    K+C +   ++I
Sbjct: 1028 WMTEWAEWYCKKQSQEYEKLEEKCGMCTGKGQGDGKDCTQKDKECSPCKKAC-DAYKKEI 1086

Query: 68   ENYGKNLKI 76
            E + K  K 
Sbjct: 1087 EKWEKQWKT 1095



>EAY10719.1 on XP_001348946  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3553

 Score = 22.7 bits (47), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 13/69 (18%)

Query: 20   MLDEW-ENRIKIEELELEKLEEK-----------NETLKQKSKECEQASKSCGEILSRDI 67
             + EW E   K +  E EKLEEK            +   QK KEC    K+C +   ++I
Sbjct: 1028 WMTEWAEWYCKKQSQEYEKLEEKCGMCTGKGQGDGKDCTQKDKECSPCKKAC-DAYKKEI 1086

Query: 68   ENYGKNLKI 76
            E + K  K 
Sbjct: 1087 EKWEKQWKT 1095




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10720.1 hypothetical protein TVAG_364450 [Trichomonas
vaginalis G3]
         (196 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_828103  VSG  (Establishment)  [Trypanosoma brucei]                  27   0.96 

>EAY10720.1 on XP_828103  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 472

 Score = 26.6 bits (57), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 14/33 (42%), Positives = 16/33 (48%)

Query: 11  GHSLGGLVVLSCGLFHSEELINNNIKGIIAIAP 43
           G +LGG VV + GLF      NNN    I  A 
Sbjct: 228 GGNLGGDVVFAGGLFKLGTTFNNNHADAITTAS 260




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10725.1 UBA/TS-N domain containing protein
[Trichomonas vaginalis G3]
         (291 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_806519   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           33   0.014
XP_808394   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           33   0.016
XP_804330   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           31   0.087
XP_805038   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           31   0.094
XP_816886   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.67 
XP_821088   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.1  
XP_817816   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.2  
XP_818353   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.3  
XP_809850   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.8  
XP_813587   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.0  
XP_810574   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.2  
XP_818399   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.3  
XP_001351438  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   2.6  
XP_001351439  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   2.9  
XP_001608784  variant erythrocyte surface antigen-1, beta subuni...    26   2.9  
XP_819530   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   3.5  
XP_807541   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   3.9  
XP_829333  VSG  (Establishment)  [Trypanosoma brucei]                  25   4.4  
XP_001347692  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   9.5  

>EAY10725.1 on XP_806519   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 912

 Score = 33.5 bits (75), Expect = 0.014,   Method: Composition-based stats.
 Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 20/186 (10%)

Query: 82  NQEKFEAEITAPPPKPAPETKQKTQKEDFHAILPTVVTQKTKQSSIPPPPPPKISTYTPP 141
           N EK  A ++ PP +PA +T   + +    ++ P   TQ T+Q+++     P  ST +  
Sbjct: 697 NPEKAVA-VSPPPVEPANDTVTTSTQATVPSLTPAG-TQPTEQATVNASSVPSGSTPSTT 754

Query: 142 TVKTTSLRDQST-NTSSIP---PPAPPEQTDPSNFKELVSQLTDMGLDEKSSTEALRKTG 197
                +  +Q+T N SS+P    P+ P ++ P+   E   + T    D+ +S  +     
Sbjct: 755 AESRPAEPEQATLNASSVPSGGAPSTPAESRPAE-PETAREGT---ADQPTSATSSSAAS 810

Query: 198 YDVTKAINYIFGQTSTDNAPPPQPQQQTKSQDSNSDPTYILQDQIDAILAGYSSSERDAI 257
            DV        G +S+D+A     + + K Q     PT       DA  A   ++E    
Sbjct: 811 TDV--------GASSSDDAQTVGTEGENKMQAGQ--PTQFSVGTPDAANAATHNAEGKGQ 860

Query: 258 NRLHDQ 263
           + LH Q
Sbjct: 861 DGLHPQ 866



>EAY10725.1 on XP_808394   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 912

 Score = 33.5 bits (75), Expect = 0.016,   Method: Composition-based stats.
 Identities = 48/186 (25%), Positives = 82/186 (44%), Gaps = 22/186 (11%)

Query: 83  QEKFEAEITAPPP-KPAPETKQKTQKEDFHAILPTVVTQKTKQSSIPPPPPPKISTYTPP 141
           QEK  A   +PPP +PA +T   + +    ++ P   TQ T+Q+++     P  ST +  
Sbjct: 698 QEK--AVAVSPPPVEPANDTVTTSTQATVPSLTPA-GTQPTEQATLNASSVPSGSTPSTT 754

Query: 142 TVKTTSLRDQST-NTSSIP---PPAPPEQTDPSNFKELVSQLTDMGLDEKSSTEALRKTG 197
              +++  +Q+T N SS+P    P+ P ++ P+   E   + T    D+ +S  +     
Sbjct: 755 AESSSAEPEQATLNASSVPSGGAPSTPAESRPAE-PETAREGT---ADQPTSATSSSAAS 810

Query: 198 YDVTKAINYIFGQTSTDNAPPPQPQQQTKSQDSNSDPTYILQDQIDAILAGYSSSERDAI 257
            DV        G +S+D+A     + + K Q     PT       DA  A   ++E    
Sbjct: 811 TDV--------GASSSDDAQTVGTEGENKMQAGQ--PTQFSVGTPDAANAATHNAEGKGK 860

Query: 258 NRLHDQ 263
           + LH Q
Sbjct: 861 DGLHPQ 866



>EAY10725.1 on XP_804330   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 910

 Score = 30.8 bits (68), Expect = 0.087,   Method: Composition-based stats.
 Identities = 44/191 (23%), Positives = 69/191 (36%), Gaps = 30/191 (15%)

Query: 88  AEITAPP--PKPAPETKQKTQKEDFHAILPTVVTQKTKQSSIPPPPPPKISTYTPPTVKT 145
           +++T PP   KP P     T       +  +V T+   Q ++P P P        PT + 
Sbjct: 688 SKVTIPPPERKPVPAKALTTTSSSVEPLTTSVTTE--TQPTVPSPTPAG----PQPTEQA 741

Query: 146 TSLRDQSTNTSSIP---PPAPPEQ-----TDPSNFKELVSQLTDMGLDEKSSTEALRKTG 197
           T       N SS+P    P+ PE+     + P+      S   +   D+ +S  A    G
Sbjct: 742 T------LNGSSVPSGGAPSTPEELNAATSTPAELNAATSSAREGTADQPAS--ATSSDG 793

Query: 198 YDVTKAINYIFGQTSTDNAPPPQPQQQTKSQDSN-----SDPTYILQDQIDAILAGYSSS 252
           ++   ++    G  STD         QT   +         PT       DA  A   ++
Sbjct: 794 HEAVASVTSS-GAASTDVGASSSDDAQTVGTEGGDMMQADQPTQFSVGTPDAANAATHNA 852

Query: 253 ERDAINRLHDQ 263
           E    + LH Q
Sbjct: 853 EGKGQDGLHPQ 863



>EAY10725.1 on XP_805038   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 927

 Score = 30.8 bits (68), Expect = 0.094,   Method: Composition-based stats.
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 6/49 (12%)

Query: 130 PPPPKISTY----TPPTVKTTSLRDQSTNTSSIPPPAP--PEQTDPSNF 172
           PPP + S      T P+V++ + R  +    ++PPPA   P+QTD +  
Sbjct: 692 PPPERKSAKAAAATSPSVESANDRVNTNTQPTVPPPATAGPQQTDQTTL 740




 Score = 30.0 bits (66), Expect = 0.18,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 8/82 (9%)

Query: 89  EITAPPPKPAPETKQKTQKEDFHAILPTVVTQKTKQSSIPPPPPPKISTYTPPTVKTTSL 148
           ++T PPP+               +    V T    Q ++PPP     +T  P     T+L
Sbjct: 688 KVTIPPPERKSAKAAAATSPSVESANDRVNTNT--QPTVPPP-----ATAGPQQTDQTTL 740

Query: 149 RDQSTNTSSIPP-PAPPEQTDP 169
              S  +   PP PA P+  +P
Sbjct: 741 NTSSVPSGGAPPTPAEPKSEEP 762



>EAY10725.1 on XP_816886   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 905

 Score = 28.1 bits (61), Expect = 0.67,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 28/76 (36%), Gaps = 7/76 (9%)

Query: 93  PPPKPAPETKQ-------KTQKEDFHAILPTVVTQKTKQSSIPPPPPPKISTYTPPTVKT 145
           P PK + E  +        +    FH              S  PP P  +ST +    + 
Sbjct: 710 PRPKSSVEASEGSYAAAVSSGGRGFHGTREEETETDGNSGSASPPAPSSVSTASHSGDEG 769

Query: 146 TSLRDQSTNTSSIPPP 161
            S+R+ ++    +PPP
Sbjct: 770 MSVREGTSLQEEVPPP 785



>EAY10725.1 on XP_821088   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 910

 Score = 27.3 bits (59), Expect = 1.1,   Method: Composition-based stats.
 Identities = 44/186 (23%), Positives = 69/186 (37%), Gaps = 26/186 (13%)

Query: 71  IFTTMTATKLDNQEKFEAEITAPPPKPAPETKQKTQKEDFHAILPTVVTQKTKQSSIPPP 130
           +  T+T   L N+   EAEI A  P   P  +   +K   H+ + +         SI PP
Sbjct: 710 VSVTVTNVLLYNRPLNEAEIGAFNPNKDP-IQLLEEKPSEHSTVSS--------DSIVPP 760

Query: 131 PPPKISTY----TPPTVKTTSLRDQSTNTSSIPPPAPPEQTDPSNFKELVSQLTDMGLDE 186
            PP I+T     TP T   T L +Q        P               +S ++    +E
Sbjct: 761 SPPVIATAQQTGTPSTPAGTQLTEQGQ------PMGSSGAGSGGASAPAMSTVSTSSAEE 814

Query: 187 KSSTEALRKTGYDVTKAINYIFGQTSTDNAPPPQPQQQTKSQDSNSDPTYILQDQIDAIL 246
           +S  ++   T  D T+ +    G TS       +P  +T+   +N     + +   D   
Sbjct: 815 ESVVQSASGTSPDGTQTVGG--GSTSVG-----EPTMETREGGTNGQEEEVNKQVRDVNA 867

Query: 247 AGYSSS 252
              SSS
Sbjct: 868 TALSSS 873



>EAY10725.1 on XP_817816   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 912

 Score = 27.3 bits (59), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 7/64 (10%)

Query: 132 PPKISTYTPPTVKTTSLRDQSTNTSSIPPPAPP----EQTDPSNFKELVSQLTDMGLDEK 187
           P K ST   P+++   L   + +++SI PP+PP     Q   ++     +QLT+ G    
Sbjct: 736 PNKDST---PSLEENPLETSTVSSASIIPPSPPVTPNAQKTETSSTPAETQLTEQGQSMG 792

Query: 188 SSTE 191
           SS +
Sbjct: 793 SSKD 796



>EAY10725.1 on XP_818353   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 903

 Score = 27.3 bits (59), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 6/61 (9%)

Query: 132 PPKISTYTPPTVKTTSLRDQSTNTSSIPPPAP---PEQTDPSNFKELVSQLTDMGLDEKS 188
           P K ST   P+++  + +  + +++SI PPAP   P      N     +QLT+ G    S
Sbjct: 728 PNKDST---PSLEKEAAKPSTVSSASIMPPAPPVTPNAQKAGNPSTAGTQLTEQGQSMGS 784

Query: 189 S 189
           S
Sbjct: 785 S 785



>EAY10725.1 on XP_809850   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 915

 Score = 26.9 bits (58), Expect = 1.8,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 2/53 (3%)

Query: 117 VVTQKTKQSSIPPPPPPKISTYTPPTVKTTSLRDQSTNTSSIPPPAPPEQTDP 169
           +++   ++ S P P P   ++  PPT    +   Q+ N+S+     P EQ  P
Sbjct: 743 LISPLKEEPSTPSPVPS--ASVVPPTPLVAATAQQTGNSSTPDGTHPTEQGQP 793



>EAY10725.1 on XP_813587   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 751

 Score = 26.6 bits (57), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 4/47 (8%)

Query: 126 SIPPPP--PPKISTYTPPTVKTTSLRDQSTNTSSIPPP--APPEQTD 168
           +IPPP   P   +  T P+V++ + R  +    ++PPP  A P+QTD
Sbjct: 524 TIPPPKRKPVPAAAATSPSVESANDRVNTNTQPTVPPPATAGPQQTD 570



>EAY10725.1 on XP_810574   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 954

 Score = 26.6 bits (57), Expect = 2.2,   Method: Composition-based stats.
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 6/53 (11%)

Query: 126 SIPPPP----PPKISTYTPPTVK--TTSLRDQSTNTSSIPPPAPPEQTDPSNF 172
           +IPPP     P K  T T P V+  TTS+  +   T   P  A P+ T+ +  
Sbjct: 724 TIPPPERKPVPAKALTTTSPPVEPLTTSVTTEMQPTVPSPATAGPQPTEQATL 776



>EAY10725.1 on XP_818399   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 953

 Score = 26.6 bits (57), Expect = 2.3,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 53/132 (40%), Gaps = 2/132 (1%)

Query: 65  DVKIFPIFTTMTATKLDNQEKFEAEITAPPPKPAPETKQKTQKEDFHAILPTVVTQKTKQ 124
           D ++  +  T+T   L N+   ++EI     KP+    + T+  D     P  + Q T +
Sbjct: 709 DSEVQDVSVTVTNVLLYNRPLNDSEIAGLTTKPSIPKTRGTKTVDGDTPPPEAIKQATPE 768

Query: 125 SSIPPPPPPKISTYTPP--TVKTTSLRDQSTNTSSIPPPAPPEQTDPSNFKELVSQLTDM 182
           +  P  P  +  T   P  T +       ST+ +S    +P  +   ++     S     
Sbjct: 769 AETPSGPGGQQQTEKDPLRTSENAGSGVLSTSAASSVTNSPAAKESENHSASGTSPEGHS 828

Query: 183 GLDEKSSTEALR 194
            +D  SS+E ++
Sbjct: 829 NVDVDSSSEGVQ 840



>EAY10725.1 on XP_001351438  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2312

 Score = 26.2 bits (56), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 11/51 (21%)

Query: 15   YIEVDGNDCLATVIENHELYLFIDLV---------KQKIDVNQKFCEYPDQ 56
            Y   DG DC   VIE ++ ++ ++ +         K+ ID+  KF EY +Q
Sbjct: 1331 YCSGDGYDCTRDVIERNDKFVDLNCLGCYKQCRKYKKWIDI--KFVEYHNQ 1379



>EAY10725.1 on XP_001351439  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2326

 Score = 26.2 bits (56), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 11/51 (21%)

Query: 15   YIEVDGNDCLATVIENHELYLFIDLV---------KQKIDVNQKFCEYPDQ 56
            Y   DG DC   VIE ++ ++ ++ +         K+ ID+  KF EY +Q
Sbjct: 1345 YCSGDGYDCTRDVIERNDKFVDLNCLGCYKQCRKYKKWIDI--KFVEYHNQ 1393



>EAY10725.1 on XP_001608784  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 329

 Score = 25.8 bits (55), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 13/100 (13%)

Query: 118 VTQKTKQSSIPPPPP--PKISTYTPPTVK--TTSLRDQSTNTSS--IPPPAPPEQTDPSN 171
           VT +  + ++ P  P  P  S Y P  +     +++D   +  S   P P+P    D   
Sbjct: 29  VTGRDGKKNVKPAAPKAPANSEYGPHCLCFLAKAVKDLLYDARSPESPGPSPKRNWDDIL 88

Query: 172 FKELVS----QLTDMGLDEKSSTEALRKT---GYDVTKAI 204
             E  S     LTD+GL    ST A R T   G +V KA+
Sbjct: 89  LTEEQSIVHPVLTDLGLLSGGSTGAARDTCAGGTEVIKAL 128



>EAY10725.1 on XP_819530   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 904

 Score = 25.8 bits (55), Expect = 3.5,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 3/33 (9%)

Query: 132 PPKISTYTPPTVKTTSLRDQSTNTSSIPPPAPP 164
           P K ST   P+++  + +  + +++SI PPAPP
Sbjct: 728 PNKDST---PSLEKEAAKPSTVSSASIIPPAPP 757



>EAY10725.1 on XP_807541   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 920

 Score = 25.8 bits (55), Expect = 3.9,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 53/154 (34%), Gaps = 38/154 (24%)

Query: 88  AEITAPPP--KPAP---------ETKQKTQKEDFHAILPTVVT---QKTKQSSI------ 127
           +++T PPP  KP P         E+   T   +    +P+ V    Q+T Q+++      
Sbjct: 688 SKVTIPPPERKPVPAAAATSSSVESASDTVATNTQPTVPSPVAAGPQQTDQATLSASSGA 747

Query: 128 --------PPPPPPKISTYTPPTVKTTSLRDQSTNTSSIPPPAPPEQTDPSNFKELVSQ- 178
                   P  P    S    P V  +     + + S  P PA P     S  +    Q 
Sbjct: 748 SSGASGGAPSTPAVSESEEPKPAVSESEEPKSAESESEEPKPAEPNAATSSAEEGTADQP 807

Query: 179 ---------LTDMGLDEKSSTEALRKTGYDVTKA 203
                    +TD+G       + +   G D+ +A
Sbjct: 808 ASATSSSAAITDVGASSSDDAKTVGTEGGDMMQA 841



>EAY10725.1 on XP_829333  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 420

 Score = 25.4 bits (54), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 12/21 (57%), Positives = 14/21 (66%)

Query: 80  LDNQEKFEAEITAPPPKPAPE 100
           L+N EK E +  A PPKPA E
Sbjct: 299 LENVEKLERKQVAIPPKPADE 319



>EAY10725.1 on XP_001347692  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2994

 Score = 24.6 bits (52), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 11/34 (32%), Positives = 15/34 (44%)

Query: 6   LKGEYKDASYIEVDGNDCLATVIENHELYLFIDL 39
            +GE     Y   DG DC  T I  +  Y+ +D 
Sbjct: 342 CRGETSGKRYCSGDGYDCTKTDISRNIFYMDLDC 375




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10726.1 hypothetical protein TVAG_364510 [Trichomonas
vaginalis G3]
         (510 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10731.1 hypothetical protein TVAG_364560 [Trichomonas
vaginalis G3]
         (274 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_818221   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.63 
AAW71454  Histo-aspartic protease  (Proteases)  [Plasmodium falc...    27   0.94 
AAW71455  Histo-aspartic protease  (Proteases)  [Plasmodium falc...    27   0.94 
AAW71456  Histo-aspartic protease  (Proteases)  [Plasmodium falc...    27   0.94 
AAW71457  Histo-aspartic protease  (Proteases)  [Plasmodium falc...    27   0.94 
AAW71458  Histo-aspartic protease  (Proteases)  [Plasmodium falc...    27   0.94 
XP_810808   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   3.7  
XP_821088   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   4.2  

>EAY10731.1 on XP_818221   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 748

 Score = 28.1 bits (61), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 11/93 (11%)

Query: 161 FIESITLAYMDTHNSRFASMHLDQQNSEFVKTINFNVPQCSEQVFNGETTISGV--PIKD 218
            + S+T+    T ++   +  L   NS++   I +   +  E +F G+TT SG   P K+
Sbjct: 559 LVASVTIEEAPTADAPLLTAMLGDNNSQYTMGILYTADKKWETMFKGKTTESGTWEPGKE 618

Query: 219 ---LITLS------YINTQYLMMELYPYVKYAP 242
               + L       YI+ + L  E  P    AP
Sbjct: 619 YQVALMLQGKKASVYIDGESLGEEEVPLTGEAP 651



>EAY10731.1 on AAW71454  Histo-aspartic protease  (Proteases)  [Plasmodium
           falciparum]
          Length = 451

 Score = 27.3 bits (59), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 12/33 (36%), Positives = 20/33 (60%)

Query: 210 TISGVPIKDLITLSYINTQYLMMELYPYVKYAP 242
           TISG+  KDL+T+  ++  Y  +E+   V + P
Sbjct: 204 TISGIFSKDLVTIGKLSVPYKFIEMTEIVGFEP 236



>EAY10731.1 on AAW71455  Histo-aspartic protease  (Proteases)  [Plasmodium
           falciparum]
          Length = 451

 Score = 27.3 bits (59), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 12/33 (36%), Positives = 20/33 (60%)

Query: 210 TISGVPIKDLITLSYINTQYLMMELYPYVKYAP 242
           TISG+  KDL+T+  ++  Y  +E+   V + P
Sbjct: 204 TISGIFSKDLVTIGKLSVPYKFIEMTEIVGFEP 236



>EAY10731.1 on AAW71456  Histo-aspartic protease  (Proteases)  [Plasmodium
           falciparum]
          Length = 451

 Score = 27.3 bits (59), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 12/33 (36%), Positives = 20/33 (60%)

Query: 210 TISGVPIKDLITLSYINTQYLMMELYPYVKYAP 242
           TISG+  KDL+T+  ++  Y  +E+   V + P
Sbjct: 204 TISGIFSKDLVTIGKLSVPYKFIEMTEIVGFEP 236



>EAY10731.1 on AAW71457  Histo-aspartic protease  (Proteases)  [Plasmodium
           falciparum]
          Length = 451

 Score = 27.3 bits (59), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 12/33 (36%), Positives = 20/33 (60%)

Query: 210 TISGVPIKDLITLSYINTQYLMMELYPYVKYAP 242
           TISG+  KDL+T+  ++  Y  +E+   V + P
Sbjct: 204 TISGIFSKDLVTIGKLSVPYKFIEMTEIVGFEP 236



>EAY10731.1 on AAW71458  Histo-aspartic protease  (Proteases)  [Plasmodium
           falciparum]
          Length = 451

 Score = 27.3 bits (59), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 12/33 (36%), Positives = 20/33 (60%)

Query: 210 TISGVPIKDLITLSYINTQYLMMELYPYVKYAP 242
           TISG+  KDL+T+  ++  Y  +E+   V + P
Sbjct: 204 TISGIFSKDLVTIGKLSVPYKFIEMTEIVGFEP 236



>EAY10731.1 on XP_810808   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 735

 Score = 25.8 bits (55), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 62  SFERFTKSQYQWFLRLNPYTYFNPTALDKFIKE 94
           S E+  ++ Y W    N   YF P  +D  +KE
Sbjct: 399 SGEKSERALYLWVTDNNRSFYFGPVGMDTTVKE 431



>EAY10731.1 on XP_821088   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 910

 Score = 25.4 bits (54), Expect = 4.2,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 19/37 (51%)

Query: 89  DKFIKELNQKYDPSMDPVIKGAVFDKSTTRLLILSGG 125
           D  I  L  K D   +P++ G  +DK   + ++L GG
Sbjct: 602 DTPIPLLGVKMDGDENPILLGLSYDKEKKKWILLCGG 638




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10742.1 hypothetical protein TVAG_364670 [Trichomonas
vaginalis G3]
         (80 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609666  variant erythrocyte surface antigen-1, alpha subun...    22   4.5  
XP_001351515  PfEMP1  (Establishment)  [Plasmodium falciparum]         22   5.6  

>EAY10742.1 on XP_001609666  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1269

 Score = 22.3 bits (46), Expect = 4.5,   Method: Composition-based stats.
 Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 5/79 (6%)

Query: 4   KVTEAMKQKFLVEYIKSGIIPEGFYIHTM--KDGRVQFRKIKQPLDK--EGILRKIKLHE 59
           K T A K K ++E I   ++  G     +  KD  V   K+K+ L K  EG+       +
Sbjct: 603 KDTLAEKLKDVLEKIGEVVVQLGNAQEALETKDKDV-IEKVKEALRKAKEGLETAKNGLK 661

Query: 60  DNIAELKKKLKELEKADDS 78
           D + E KKKL EL     S
Sbjct: 662 DKLEEAKKKLDELTNGGGS 680



>EAY10742.1 on XP_001351515  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2181

 Score = 22.3 bits (46), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 46  LDKEGILRKIKLHEDNIAELKKKLKELEKADDSEE 80
           L K G  +  K +E  + E KK+  E++K  D++E
Sbjct: 635 LCKNGCNKNCKCYESWVEEKKKEWGEIKKHFDTQE 669




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10749.1 hypothetical protein TVAG_121530 [Trichomonas
vaginalis G3]
         (273 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10752.1 Variant SH3 domain containing protein
[Trichomonas vaginalis G3]
         (309 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 28   0.70 
XP_001349434  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   5.2  
XP_001347288  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   6.0  

>EAY10752.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 28.1 bits (61), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 8/91 (8%)

Query: 32   IDKAVKWFNEARSYLKKISEGCQSIKKSSNEMHPMLECCADRIFRETYKAMDSVSDYINE 91
            I+K  +  NEA  Y  K+ E  + I K  NE++ ++      +    Y+ +         
Sbjct: 1512 INKTKQVSNEAMEYANKMDEKNKDIIKIENELYNLINNNIRSLKGVKYEKV--------R 1563

Query: 92   KQLQKALDFAQNYDGKISQVNTYMKQTLDEL 122
            KQ + A+D   N    I  + T  K+ LDE+
Sbjct: 1564 KQARNAIDDINNIHSNIKTILTKSKERLDEI 1594



>EAY10752.1 on XP_001349434  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2109

 Score = 25.4 bits (54), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 31/160 (19%), Positives = 65/160 (40%), Gaps = 16/160 (10%)

Query: 2   KASIRQKAAVDTIAYSISLVTELVSCSKKNIDKAVKWFNEARSYLKKISEGCQSIKKSSN 61
           K  +++K   D++      +   ++ S KN+DKA   +N+ +    ++ E   ++ +   
Sbjct: 202 KDRVQKKKLQDSLKNIFGNIYNELTTSGKNVDKAKARYNDPKGDFFQLREDWWALNRE-- 259

Query: 62  EMHPMLECCA--DRIFRETYKAMDSVSDYINEKQLQKALDFAQNYDGKISQVNTYMKQTL 119
           ++   + C A  ++ FR T    +S+           A +     +G       Y+ Q L
Sbjct: 260 KVWSAITCNAQGNKYFRPTCSGGESI-----------AHNKCTCINGDPPTYFDYVPQYL 308

Query: 120 DELVDLYENFVKDTFHPIQSCIKDC-ASYGYDAHCGYLRY 158
               +  E+F +   H +Q+  + C    G D +C    Y
Sbjct: 309 RWFEEWAEDFCRKRKHKLQNAKEQCRGKNGEDKYCDLNGY 348



>EAY10752.1 on XP_001347288  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2241

 Score = 25.4 bits (54), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 130  VKDTFHPIQSCIKDCASYGYDAHCGYLRYSNFLDEIE 166
            +KD         K C+  G+D   G  RY+N  D+++
Sbjct: 1289 IKDNCTEDGGKTKKCSGDGHDCTDGKRRYNNMFDDLD 1325




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10756.1 hypothetical protein TVAG_121600 [Trichomonas
vaginalis G3]
         (308 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001347692  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   5.7  
XP_001608668  variant erythrocyte surface antigen-1, alpha subun...    25   8.0  
XP_001349036  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   8.1  
XP_001351079  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   9.2  

>EAY10756.1 on XP_001347692  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2994

 Score = 25.4 bits (54), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 13/29 (44%), Positives = 22/29 (75%), Gaps = 3/29 (10%)

Query: 113 FEEYAENKLNQL---KSKHTKELEQHEQN 138
           ++E+ ENK N+L   K+K+TKE+E+ + N
Sbjct: 385 YDEWIENKENELDKQKNKYTKEIEKLKDN 413



>EAY10756.1 on XP_001608668  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1337

 Score = 25.0 bits (53), Expect = 8.0,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 24/40 (60%)

Query: 183 REEKESKEVFNRAISEWESDKQQLLEKQRKELEAMTNRIN 222
           +E +E+K+   +A +E ++ +   LEK+ K LE   + +N
Sbjct: 747 KELEEAKKAVEKAKTEGDNVRMAKLEKKMKALENAKDALN 786



>EAY10756.1 on XP_001349036  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2192

 Score = 25.0 bits (53), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 13/37 (35%), Positives = 23/37 (62%)

Query: 193  NRAISEWESDKQQLLEKQRKELEAMTNRINLHRQERN 229
            +R + E  S+K++LL+K ++E E  T+  N H  + N
Sbjct: 2064 HRDMCEQWSNKEELLDKLKEEWENETHSGNTHPSDSN 2100



>EAY10756.1 on XP_001351079  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2203

 Score = 24.6 bits (52), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 12/37 (32%), Positives = 24/37 (64%)

Query: 193  NRAISEWESDKQQLLEKQRKELEAMTNRINLHRQERN 229
            +R + E  ++K++LL+K ++E E  T+  N+H  + N
Sbjct: 2075 HRDMCEKWNNKEELLDKLKEEWENETHSGNIHTSDSN 2111




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10757.1 Pyridine nucleotide-disulfide oxidoreductase
family protein [Trichomonas vaginalis G3]
         (871 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_803305   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.65 
XP_001350413  PfEMP1  (Establishment)  [Plasmodium falciparum]         29   1.8  

>EAY10757.1 on XP_803305   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 259

 Score = 29.6 bits (65), Expect = 0.65,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 26/81 (32%)

Query: 435 IVLWRCVICGEIYAGVTPPAQCPACGVSEDLFELYEGEEIAVKSTEKLNFVVVGSGAAAV 494
           +V+W C   G   A    P  CP C             E  V S    + V +  G  AV
Sbjct: 53  VVMWMCCGTGGDAAAEELPQSCPGCSSGRLFVWRNTTPEETVDSLYAPSLVEMNGGVFAV 112

Query: 495 AACEAIRQRNSAASIQMITRE 515
           A     +  NS      I  E
Sbjct: 113 AEALCTKSENSGCHFTGIASE 133



>EAY10757.1 on XP_001350413  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2860

 Score = 28.9 bits (63), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 8/44 (18%)

Query: 534 PDDQYWIKPEQW---YK---DNKIDVMLDTNVTSVDSKAKKVKL 571
           PDDQY IK E+W   YK   DNK   ++ TN   V+S +K +K 
Sbjct: 538 PDDQYGIKNEKWECYYKSSVDNK--CIMQTNNQKVESHSKIMKF 579




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10765.1 hypothetical protein TVAG_121690 [Trichomonas
vaginalis G3]
         (173 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001350415  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   2.0  
XP_001611147  variant erythrocyte surface antigen-1, alpha subun...    24   5.3  

>EAY10765.1 on XP_001350415  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3056

 Score = 25.8 bits (55), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 3/47 (6%)

Query: 89   KNAFVNTVRTMIDQYLDELIPDTPEIDIDQPIQFPPEVNELFTKLDE 135
            KN  VN  +   D + D L+ ++   DI++ +  PP    LF K+DE
Sbjct: 2338 KNINVNMKKNNDDTWTD-LVKNSS--DINKGVLLPPRRKNLFLKIDE 2381



>EAY10765.1 on XP_001611147  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1304

 Score = 24.3 bits (51), Expect = 5.3,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 3/55 (5%)

Query: 64  GQQIKCQIEKMQQQAIRL---QQQILGRKNAFVNTVRTMIDQYLDELIPDTPEID 115
            ++IK  +E + Q  ++L   Q+ + G+K   +N V+T +     EL     E+D
Sbjct: 655 AKKIKDVLEAIGQVVVQLGNAQEALEGKKTEAINAVKTALGTAKTELEKARTELD 709




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10766.1 hypothetical protein TVAG_121700 [Trichomonas
vaginalis G3]
         (160 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10774.1 hypothetical protein TVAG_121780 [Trichomonas
vaginalis G3]
         (801 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_812069   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   3.1  

>EAY10774.1 on XP_812069   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 948

 Score = 27.7 bits (60), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 582 SPPVPKTPTPAQYLEDLQSDDWEKQNKAIEALLGGCAPK 620
           S P+P T       + L+ D WE +   + A++ G A K
Sbjct: 477 SVPIPTTGLVGHLADRLRGDKWEDEYLGVNAVVRGAAKK 515




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10775.1 hypothetical protein TVAG_121790 [Trichomonas
vaginalis G3]
         (161 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351517  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   9.2  

>EAY10775.1 on XP_001351517  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2193

 Score = 23.5 bits (49), Expect = 9.2,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 20/39 (51%)

Query: 57   GGISLFKKGIKPAWEDPKNENGQAVTISLSVWTQELWEK 95
            GG     +G  P+  DPK E  +A   S +V T  LW++
Sbjct: 986  GGSETQPQGGTPSQPDPKVELLKAFVESAAVETFFLWDR 1024




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10783.1 hypothetical protein TVAG_121870 [Trichomonas
vaginalis G3]
         (75 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001347692  PfEMP1  (Establishment)  [Plasmodium falciparum]         22   9.2  

>EAY10783.1 on XP_001347692  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2994

 Score = 21.6 bits (44), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 9/24 (37%), Positives = 16/24 (66%)

Query: 34  DDVAKKIISQTLDTTSICLNKCNA 57
           DD+ K++IS+  D  ++C N+  A
Sbjct: 699 DDLIKELISKLKDKCAMCKNQHKA 722




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10785.1 hypothetical protein TVAG_121890 [Trichomonas
vaginalis G3]
         (148 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10786.1 hypothetical protein TVAG_121900 [Trichomonas
vaginalis G3]
         (96 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10789.1 Leucine Rich Repeat family protein
[Trichomonas vaginalis G3]
         (681 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_803417  VSG  (Establishment)  [Trypanosoma brucei]                  30   0.54 
XP_806744   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   3.5  
XP_807319   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   7.2  

>EAY10789.1 on XP_803417  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 540

 Score = 29.6 bits (65), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 16/135 (11%)

Query: 512 KLISIEKEMTQEEYKAAKKNEEEREVMKSQLETQIQDIKNSTAREEVLTEKLLQDTEALK 571
           KL+  EK++ + E K A K+ E++E    +  T+ +D K     E++  E  + +TEA K
Sbjct: 397 KLLEAEKKLQEVETKTATKSAEDKE---KECNTKGKDKKEEC--EKLAKEGCVFNTEAKK 451

Query: 572 EEIQKETQQQQEEEMELQRKIDQVMKILE---ETKEKVQD-EESIRNFVPPQIDF--SQF 625
            E++KE + + E+  +   K       +E   E  EKVQ  +   +N V   ID+   + 
Sbjct: 452 CELKKEVKPELEKANQETGKTTTDKCGIEKPPEDCEKVQGTKPKGKNVVCGWIDYIDGKG 511

Query: 626 TSDPI-----FLVDK 635
             +P      FLVDK
Sbjct: 512 KVEPACRSSSFLVDK 526



>EAY10789.1 on XP_806744   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 789

 Score = 27.3 bits (59), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)

Query: 431 VQQAINTLCQRNKQIQREVNLQPLKKELVQLS 462
            QQA  TL + NK +QR  +LQP   +  +L+
Sbjct: 552 AQQA--TLSEENKSVQRGSDLQPQDPQPAELT 581



>EAY10789.1 on XP_807319   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1041

 Score = 26.2 bits (56), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)

Query: 431 VQQAINTLCQRNKQIQREVNLQPLKKELVQLS 462
            QQA  TL + NK +QR  +LQP   +  +L+
Sbjct: 804 AQQA--TLSKENKSVQRGSDLQPQDPQPAELT 833




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10790.1 DegT/DnrJ/EryC1/StrS aminotransferase family
protein [Trichomonas vaginalis G3]
         (241 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_813606   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   6.2  

>EAY10790.1 on XP_813606   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 930

 Score = 24.6 bits (52), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 12/46 (26%), Positives = 19/46 (41%)

Query: 176 CDTMTHTIESDISTVSFYASHIITAGGTGGMVMFNNESMYKRACSI 221
           CD  T  + S + T   Y   I+   GT G V  + + +    C +
Sbjct: 630 CDGKTEELSSTLGTDKTYQVAIMLRNGTQGSVYVDGQRVGNEECEL 675




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10791.1 NDP-hexose 3,4-dehydratase, putative
[Trichomonas vaginalis G3]
         (148 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_828099  VSG  (Establishment)  [Trypanosoma brucei]                  25   2.3  
XP_806591   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   3.9  

>EAY10791.1 on XP_828099  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 527

 Score = 25.0 bits (53), Expect = 2.3,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query: 10  LDRLPQNIKIRHELFDRYIKTLKNNEYASKYYKF 43
           +D+ P N+K+R   FD+ I      + A+    F
Sbjct: 365 IDKTPLNLKVRETTFDKTIFETAGTDSAATVLTF 398



>EAY10791.1 on XP_806591   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 272

 Score = 24.3 bits (51), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 12/31 (38%), Positives = 17/31 (54%)

Query: 111 KNGFLIGCHQGLTLSDVDRVCEVLINFAKRK 141
           KNG+ I   +G+     D V   LIN+A+ K
Sbjct: 214 KNGWDIQLVEGVATQSTDGVQSTLINWAEPK 244




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10792.1 hypothetical protein TVAG_121960 [Trichomonas
vaginalis G3]
         (297 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 27   2.6  
XP_807986   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   9.3  
XP_806989   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   9.9  

>EAY10792.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 26.6 bits (57), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 4/60 (6%)

Query: 149  DDDSDELNIFEQII--HKKETHRQKPHDDISDVKVSDGDIEKACKYYKEMT--FYDHKVE 204
            D+  D L ++  II  H   T   K  D+I  +K    D+ K CK  +E++   YD K++
Sbjct: 1985 DESIDNLKVYNDIIELHTYSTQILKYLDNIQKLKGDCNDLVKDCKELRELSTALYDLKIQ 2044



>EAY10792.1 on XP_807986   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1054

 Score = 24.6 bits (52), Expect = 9.3,   Method: Composition-based stats.
 Identities = 11/31 (35%), Positives = 19/31 (61%)

Query: 242 SIKSDQTSEKSSPSKSHHKHNQTDKKESKSI 272
           S+ S+  SE+S+ S      + TDK+E +S+
Sbjct: 740 SVASESRSEESATSHEKLTEDDTDKQEEESV 770



>EAY10792.1 on XP_806989   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 922

 Score = 24.3 bits (51), Expect = 9.9,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 8/90 (8%)

Query: 198 FYDHKVENLVHNAMSKNNCI-------PPKEKLIRPKSQSKHNQTDKKESKSIKSDQTSE 250
            Y+  +     NA+ K N +       P +E   +  + S+ ++       +    Q   
Sbjct: 678 LYNRALNEAKLNALMKRNTVAAAAAKVPDQEVAAQTTNVSEPSRHPANVPVATPEAQQDA 737

Query: 251 KSSPSKSHHKHNQTDKKESKSIKSDQTSEE 280
            S+P +S H   QT + ES   +S QTS +
Sbjct: 738 TSAP-RSQHSPAQTSESESGPAESKQTSSD 766




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10795.1 hypothetical protein TVAG_121990 [Trichomonas
vaginalis G3]
         (428 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_828099  VSG  (Establishment)  [Trypanosoma brucei]                  28   1.0  
XP_001611897  variant erythrocyte surface antigen-1, alpha subun...    26   4.5  
XP_001609315  variant erythrocyte surface antigen-1, alpha subun...    26   5.4  
XP_001609754  variant erythrocyte surface antigen-1, alpha subun...    26   5.6  
XP_001351321  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   5.7  

>EAY10795.1 on XP_828099  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 527

 Score = 28.1 bits (61), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 58/154 (37%), Gaps = 10/154 (6%)

Query: 107 FVKKMDDIFLSKFTDIRNQYVRGNQRMTSNYEKSMEELKKKQLAYENAKEQYDIAFNKAL 166
           FV  +  I      DI +   +  +   S  +   +   K + A  +AKE    A   A+
Sbjct: 10  FVMSLVSILPVSAADIEDTATQQVKTACSAAQYLHKLASKLEQARPSAKEIRTTAIKTAM 69

Query: 167 EAYNIFKADRTPELKEQFNQVKIVFLECQKALENSLDTLNRGRLTFNEDYNITLAIWEEA 226
            AY I  A        Q  Q +I FL      E  +DTLNR      + YN  + I ++ 
Sbjct: 70  -AYRIKAAF------SQDKQTEIAFLAMAAVTEAGIDTLNRETEAAAKRYNDAVRIIKQQ 122

Query: 227 EVAR---QNTVNTLLKDFSTVIQTLAAVNKTCAM 257
           E A      T +T  K  ST   T A +     M
Sbjct: 123 EAAMLTLHRTESTSAKVTSTAPSTAAQLESVTGM 156



>EAY10795.1 on XP_001611897  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1369

 Score = 26.2 bits (56), Expect = 4.5,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 34/77 (44%), Gaps = 7/77 (9%)

Query: 129 GNQRMTSNYEKSMEELKKKQLAYENAKEQYDIAFNKALEAYNIFKADRTPELKEQFNQVK 188
            N     + ++   E +K +  Y +AK++     +K LE     K     ++KE+ N   
Sbjct: 777 ANGSHAGSLQQITSEAQKWRKDYSSAKDRISEVIHKVLEVLTTLKEGVKEKIKEEMNG-- 834

Query: 189 IVFLECQKALENSLDTL 205
                 +KAL +++D L
Sbjct: 835 -----HEKALNDAIDKL 846



>EAY10795.1 on XP_001609315  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1338

 Score = 25.8 bits (55), Expect = 5.4,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 2/57 (3%)

Query: 118 KFTDIRNQYVRGNQRMTSNYEKSMEELK--KKQLAYENAKEQYDIAFNKALEAYNIF 172
           K  ++ N    G   +    E ++E  K  +K+  Y NAK++   A +K LE   I 
Sbjct: 749 KIKELTNGSGGGKGNLLGEVEGALENAKNIEKERDYSNAKDKISAAIHKVLEVLKIL 805



>EAY10795.1 on XP_001609754  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1295

 Score = 25.8 bits (55), Expect = 5.6,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%)

Query: 134 TSNYEKSMEELKKKQLAYENAKEQYDIAFNKALEAYNIFKADRTPELKEQFNQVKIVFLE 193
           T + ++   EL+K +  Y +AK++     NK  +   + +    P++  Q N  K  F +
Sbjct: 756 TGSLQQVGSELQKWKKDYSSAKDRISEVINKVRDVLTVLEKG-LPQVNGQLNGHKDEFTK 814

Query: 194 CQKALEN 200
             K LE+
Sbjct: 815 AIKKLED 821



>EAY10795.1 on XP_001351321  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3467

 Score = 25.8 bits (55), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 15/47 (31%), Positives = 22/47 (46%)

Query: 127  VRGNQRMTSNYEKSMEELKKKQLAYENAKEQYDIAFNKALEAYNIFK 173
             +GN    S  +   E +  K+  Y   KE++DI  NK  E Y  +K
Sbjct: 1462 TKGNHGCVSACKDYEEYISTKKKQYNTQKEKFDIDKNKGNEEYENYK 1508




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10797.1 hypothetical protein TVAG_122010 [Trichomonas
vaginalis G3]
         (535 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CAA96437  MIC2  (Invasion)  [Eimeria tenella]                          30   0.41 

>EAY10797.1 on CAA96437  MIC2  (Invasion)  [Eimeria tenella]
          Length = 255

 Score = 29.6 bits (65), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 20/81 (24%)

Query: 422 VRDKLRLDEFLRKTENRFKIFEPGEDCQMDVDPKEVADAEKRIIELEEKLEQVCPIKGKK 481
           VR+ L +DE ++ T   +         + D     VAD  +++++L E            
Sbjct: 64  VRNGLSVDETIKVTSAGWT------KSERDFIVSLVADETRKVVQLRE------------ 105

Query: 482 HRSHGGAAPASPAPKPAEKKP 502
             S G +  + P P PAEK P
Sbjct: 106 --SEGASGASGPGPAPAEKPP 124




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10800.1 ribosomal protein L7Ae, putative [Trichomonas
vaginalis G3]
         (138 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001349031  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   6.0  

>EAY10800.1 on XP_001349031  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2275

 Score = 23.5 bits (49), Expect = 6.0,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 2/39 (5%)

Query: 12  QKITYPSPNQEGTTAIASMLKKLIREKQVEIRINSTNKS 50
           +K+  P PN+EGTT   ++LK       +E ++ +  K+
Sbjct: 532 EKLYEPKPNKEGTT--ITILKSGENHDDIETKLKAFCKT 568




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10802.1 hypothetical protein TVAG_122060 [Trichomonas
vaginalis G3]
         (135 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609314  variant erythrocyte surface antigen-1, beta subuni...    23   7.6  

>EAY10802.1 on XP_001609314  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 1115

 Score = 23.1 bits (48), Expect = 7.6,   Method: Composition-based stats.
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 88  TTLRFSPSNEVLASKPNAAYIANPST 113
           TTLR S  N ++  KP    ++N ST
Sbjct: 200 TTLRSSVENTIIGHKPIWKDVSNDST 225




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10803.1 Adaptor complexes medium subunit family
protein [Trichomonas vaginalis G3]
         (395 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_806132   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   1.2  
XP_807449   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   1.4  
XP_001349031  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   3.1  

>EAY10803.1 on XP_806132   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 754

 Score = 27.7 bits (60), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 18/105 (17%)

Query: 72  STIALSSLVIEFEKMLERSLKSELSVDTMK------VDYPIA--YVLLDQFIDAGYPFID 123
           S I+LS L  E       ++KS LS    K      +  P A    +L   +  G  +ID
Sbjct: 460 SAISLSRLTEELS-----AIKSVLSTWAQKDAFFSKLTIPTAGLVAVLSNALSGGDTWID 514

Query: 124 EFNLLCSSFNDTTKDTIGFEMQSP-----WRTSSPVKSAQYIEIT 163
           E+  L ++  + TK   GF++  P     W  ++   + +++ ++
Sbjct: 515 EYLCLNATVTNATKVRYGFQLTEPSSRVSWSVNTRANNVRHVSLS 559



>EAY10803.1 on XP_807449   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 700

 Score = 27.7 bits (60), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 18/105 (17%)

Query: 72  STIALSSLVIEFEKMLERSLKSELSVDTMK------VDYPIA--YVLLDQFIDAGYPFID 123
           S I+LS L  E       ++KS LS    K      +  P A    +L   +  G  +ID
Sbjct: 406 SAISLSRLTEELS-----AIKSVLSTWAQKDAFFSKLTIPTAGLVAVLSNALSGGDTWID 460

Query: 124 EFNLLCSSFNDTTKDTIGFEMQSP-----WRTSSPVKSAQYIEIT 163
           E+  L ++  + TK   GF++  P     W  ++   + +++ ++
Sbjct: 461 EYLCLNATVTNATKVRYGFQLTEPSSRVSWSVNTRANNVRHVSLS 505



>EAY10803.1 on XP_001349031  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2275

 Score = 26.6 bits (57), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 5/48 (10%)

Query: 289 FNLPKGFHQPSCAAGTGSMKYLKGQNMLIWSLEATDQKEILSLSGSCS 336
           FN P  F + +C       KY K  + L W   A+D K + ++    S
Sbjct: 916 FNNPDNFKEVAC-----QQKYAKNNSRLGWKCIASDTKSVATVKSDAS 958




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10806.1 glutamic acid-rich protein, putative
[Trichomonas vaginalis G3]
         (115 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001611366  variant erythrocyte surface antigen-1, beta subuni...    28   0.17 
XP_819719   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   0.19 
XP_807804   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   0.19 
XP_814930   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   0.73 
XP_001350082  Rh2b  (Adhesin)  [Plasmodium falciparum]                 24   2.1  
XP_965997  PfEMP1  (Establishment)  [Plasmodium falciparum]            23   4.6  
XP_843847  VSG  (Establishment)  [Trypanosoma brucei]                  23   4.9  
XP_001348176  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   6.2  

>EAY10806.1 on XP_001611366  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 1173

 Score = 27.7 bits (60), Expect = 0.17,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 21  FPMAPKYTEETEAKLNKSLDEVGRKDRKEKKDKQQKKDKKDRKEQPKKDKL 71
            P +  Y E  +   +K+ D+V   + ++ KDK Q  D+K  K + K+D L
Sbjct: 414 LPYSQGYKELVDRMQDKT-DQVTNGNSEQDKDKIQLYDEKSEKTELKQDCL 463



>EAY10806.1 on XP_819719   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1053

 Score = 27.3 bits (59), Expect = 0.19,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 39/104 (37%), Gaps = 1/104 (0%)

Query: 2   FNSIFEKDKFSSKTATARLFPMAPKYTEETEAKLNKSLDE-VGRKDRKEKKDKQQKKDKK 60
             ++ + D   +  A       AP+    +E  +    +  V ++ +++    QQ+KD +
Sbjct: 730 LKALTKADAVGTPEANVSALKGAPQSNHASETLIQSDSETFVIKEVKQDATSSQQRKDAQ 789

Query: 61  DRKEQPKKDKLKEKKISKKVVISGSTMRKLFSAAGKTNDIDEFP 104
           DR  + +  K               T R+        ND+D+ P
Sbjct: 790 DRSSEEENKKTAASATYSDSHAVADTKRREEQMEKAANDVDDLP 833



>EAY10806.1 on XP_807804   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1054

 Score = 27.3 bits (59), Expect = 0.19,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 39/104 (37%), Gaps = 1/104 (0%)

Query: 2   FNSIFEKDKFSSKTATARLFPMAPKYTEETEAKLNKSLDE-VGRKDRKEKKDKQQKKDKK 60
             ++ + D   +  A       AP+    +E  +    +  V ++ +++    QQ+KD +
Sbjct: 731 LKALTKADAVGTPEANVSALKGAPQSNHASETLIQSDSETFVIKEVKQDATSSQQRKDAQ 790

Query: 61  DRKEQPKKDKLKEKKISKKVVISGSTMRKLFSAAGKTNDIDEFP 104
           DR  + +  K               T R+        ND+D+ P
Sbjct: 791 DRSSEEENKKTAASATYSDSHAVADTKRREEQMEKAANDVDDLP 834



>EAY10806.1 on XP_814930   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 938

 Score = 25.8 bits (55), Expect = 0.73,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)

Query: 26  KYTEETEAKLNK-SLDEVGRKDRKEKKDKQQKKDKKDRKEQPKKDKLKEKKISKKVVISG 84
           K  +E E K  K S D   +K+  + +DK++  D +D+K     +  KE   S+    SG
Sbjct: 756 KMIKEVEDKKEKGSGDSEDKKESGDSEDKKESGDSEDKKGSGDSEDKKESGDSEDKKESG 815

Query: 85  STMRKLFSAAG 95
            +  K  S  G
Sbjct: 816 DSEDKKGSGDG 826




 Score = 23.9 bits (50), Expect = 2.8,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 28/58 (48%)

Query: 32  EAKLNKSLDEVGRKDRKEKKDKQQKKDKKDRKEQPKKDKLKEKKISKKVVISGSTMRK 89
           E K+ K +++   K   + +DK++  D +D+KE    +  K    S+    SG +  K
Sbjct: 754 ELKMIKEVEDKKEKGSGDSEDKKESGDSEDKKESGDSEDKKGSGDSEDKKESGDSEDK 811



>EAY10806.1 on XP_001350082  Rh2b  (Adhesin)  [Plasmodium falciparum]
          Length = 1115

 Score = 24.3 bits (51), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 12/44 (27%), Positives = 28/44 (63%)

Query: 47  RKEKKDKQQKKDKKDRKEQPKKDKLKEKKISKKVVISGSTMRKL 90
           RK++++KQQ+++ ++ +EQ K + + E  +    ++ GS  R +
Sbjct: 636 RKKEQEKQQQRNIQELEEQKKPEIINEALVKGDKILEGSDQRNM 679



>EAY10806.1 on XP_965997  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2879

 Score = 23.5 bits (49), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 23 MAPKYTEETEAKLNKSLDEVGRKDRKEKKDKQQK 56
          MAP+  E++     + LDE G++  KEK +K  K
Sbjct: 1  MAPQRAEDSNKSAKEVLDEFGQQVYKEKVEKDAK 34



>EAY10806.1 on XP_843847  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 407

 Score = 23.1 bits (48), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 16/74 (21%), Positives = 31/74 (41%), Gaps = 13/74 (17%)

Query: 7   EKDKFSSKTATARLFPMAPKYTEETEAKLNKSLDEVGRKDRKEKKDKQQKKDKKDRKEQP 66
           ++ K S  TAT    PMAP  +  T++  +  L  +G             + + +   QP
Sbjct: 336 QRPKQSPSTATDGNTPMAPNTSAATQSTTDPDLVPLG-------------ETRTNHSLQP 382

Query: 67  KKDKLKEKKISKKV 80
               L+ K +++ +
Sbjct: 383 SHQPLRPKNVAQAI 396



>EAY10806.1 on XP_001348176  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3119

 Score = 23.1 bits (48), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 14/33 (42%), Positives = 17/33 (51%)

Query: 26   KYTEETEAKLNKSLDEVGRKDRKEKKDKQQKKD 58
            KY  E    L K  DE   K +K +KDK Q K+
Sbjct: 1534 KYQAEAYKTLQKGCDECKNKSKKCEKDKPQCKN 1566




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10809.1 hypothetical protein TVAG_258110 [Trichomonas
vaginalis G3]
         (1521 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_828094  VSG  (Establishment)  [Trypanosoma brucei]                  32   0.37 
ABA06451  MSA-2a2  (Invasion)  [Babesia bovis]                         30   0.79 
AAL15423  MSA-2b  (Invasion)  [Babesia bovis]                          30   0.79 
XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 28   3.7  

>EAY10809.1 on XP_828094  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 483

 Score = 31.6 bits (70), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 70/184 (38%), Gaps = 29/184 (15%)

Query: 865  TLVHVIQ------ADIPAPKKMTAIPTYIPSTGDKPDAAVVKMIMDLQQHMVDYEMENQ- 917
            TL  +IQ      A I    K TA+  Y+  + D  D    +  +D   H      ++  
Sbjct: 281  TLAGLIQLAAQLKAGIRKGAKGTAVAFYLGGSHDTCDGTTDQTCVDYTAHYGAGGTKSGV 340

Query: 918  -------------QKKEELEHVISRLDSDEKQINNIISTMR---------SLKSSIKSHN 955
                         +  EE+E    +   + K+I  +I+  +         S+K S +   
Sbjct: 341  NSIPWIVKLNDAIETMEEMEKNAQKAREEAKEIRMLIAAAKRAYRTAIEPSMKQSNEPAK 400

Query: 956  SSEKIQKQEKTPKQEHTSYKPPEKELVKPKHASPPQSPKEKVLEREPPKEIAPEAPKETN 1015
            SSE   K ++  + E +  K  + E   P   +P    K+  L++E  K+IA E  K+  
Sbjct: 401  SSEGQTKMQQPSETEDSCNKKGQNECNSPCKWNPEAEGKKCKLDKEEVKKIADEVAKDAK 460

Query: 1016 KQVT 1019
               T
Sbjct: 461  TNTT 464



>EAY10809.1 on ABA06451  MSA-2a2  (Invasion)  [Babesia bovis]
          Length = 287

 Score = 30.4 bits (67), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 9/79 (11%)

Query: 156 FLIQYNQQYQTTQQ-LLQLLQQTQSAEPII------TPIPTQTPSANPKSEPTSPKKTTS 208
           FL+++   Y  ++   +++ +   + E ++      TP PT +P A P ++P +P  T+ 
Sbjct: 168 FLVKFCNDYLDSESPFMKMYKAFNTYEELLKKMPSKTPSPTSSPQATPGAKPAAP-NTSE 226

Query: 209 SRTGSTTKES-ENTVEQAP 226
           S  G   +E+ EN   QAP
Sbjct: 227 SAGGQPQQETPENRPSQAP 245



>EAY10809.1 on AAL15423  MSA-2b  (Invasion)  [Babesia bovis]
          Length = 287

 Score = 30.4 bits (67), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 9/79 (11%)

Query: 156 FLIQYNQQYQTTQQ-LLQLLQQTQSAEPII------TPIPTQTPSANPKSEPTSPKKTTS 208
           FL+++   Y  ++   +++ +   + E ++      TP PT +P A P ++P +P  T+ 
Sbjct: 168 FLVKFCNDYLDSESPFMKMYKAFNTYEELLKKMPSKTPSPTSSPQATPGAKPAAP-NTSE 226

Query: 209 SRTGSTTKES-ENTVEQAP 226
           S  G   +E+ EN   QAP
Sbjct: 227 SAGGQPQQETPENRPSQAP 245



>EAY10809.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 28.5 bits (62), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 63/122 (51%), Gaps = 5/122 (4%)

Query: 958  EKIQKQEKTPKQEHTSYKPPEKELVKP----KHASPPQSPKEKVLEREPPKEIAPEAPKE 1013
            E++QK+E+  +QE    +  ++E ++     K     +  KE+ L+R+  + +  E   +
Sbjct: 2745 ERLQKEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELK 2804

Query: 1014 TNKQVTIQLPAEEELQAEEETKSNLEIKEKPEEAPKLQPSRSMDQLQQVT-EEQLRIFRD 1072
              +Q  ++   +E+LQ EEE K   + + + EEA K Q    + + +++  +EQ R+ R 
Sbjct: 2805 RQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQERLERK 2864

Query: 1073 AI 1074
             I
Sbjct: 2865 KI 2866




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10811.1 CMGC family protein kinase [Trichomonas
vaginalis G3]
         (360 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...   134   2e-37
XP_001351561  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   1.3  
XP_001348946  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   1.3  
XP_001351319  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   2.0  
XP_001348176  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   3.0  

>EAY10811.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score =  134 bits (338), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 160/313 (51%), Gaps = 26/313 (8%)

Query: 12  LEYETQHRYQFKRLLGRGAYGVVFAAKDKQT-GKLVAVKRVERIFETTLDAKRCLREVCI 70
           L++     Y+  R +GRG +  VF   +  T  K V         +      + L+ +  
Sbjct: 47  LKWNVPDSYEIVRKIGRGKFSEVFEGLNTVTKDKCVIKILKPVKKKKIKREIKILQNL-- 104

Query: 71  LSHLKHENITNLIDVTANPDYSKFESLIVVMDLMETDLYQIINSHQPITVDHHRFFIYQV 130
                  NI  L+D+  +P  S+  SLI    +  TD   +   +  +T+   +++IYQ+
Sbjct: 105 ---RGGPNIIKLLDIVKDPQ-SRTPSLIF-EHVNNTDFKTL---YPTLTIQDIKYYIYQL 156

Query: 131 LRGLKFIHSANVLHRDLKPSNLLVNSNCD-LKIGDFGLARISQPDEDSEFLSEYVATRWY 189
           L+ + + HS  ++HRD+KP N++++     L++ D+GLA    P+++    S  VATR+Y
Sbjct: 157 LKAMNYCHSQGIMHRDIKPHNVMIDHEKKILRLIDWGLAEFYHPEQE---YSVRVATRYY 213

Query: 190 RPPEVLLNYETYGPQLDVWSVGCILAELILRK-PLFPGRSTTNQISLIVDIIGSPSEEDL 248
           + PE+L++   Y   LD+WS+GC+LA +I +K P F G    +Q+  I  ++G+   EDL
Sbjct: 214 KGPELLVDMRYYDYSLDIWSIGCMLAGIIFKKEPFFYGHDNYDQLVKIAKVLGT---EDL 270

Query: 249 ASCPSKNAVRYVKG----LGPKPKIPWKQIFRGKQ---FDDQEIDLVDRMLTWNPDKRIT 301
                K  +++       LG   K PW +    +       + +DL+DRML ++  KRIT
Sbjct: 271 HRYFEKYGLKFAPAYQEILGNHSKKPWTKFVHHENQHLVSPEVMDLLDRMLVYDHTKRIT 330

Query: 302 VDEALEHPFMEKL 314
             EA+EHPF  ++
Sbjct: 331 PLEAMEHPFFNEI 343



>EAY10811.1 on XP_001351561  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3553

 Score = 27.7 bits (60), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 4/46 (8%)

Query: 83   IDVTANPDYSKFESLIVVMDLMETDLYQIINSHQP----ITVDHHR 124
            ID+       +F ++  ++D ME D+Y  +N   P    I +DH++
Sbjct: 3474 IDMDETKGKKEFSNMDTILDDMEDDIYYDVNDENPSVDDIPMDHNK 3519



>EAY10811.1 on XP_001348946  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3553

 Score = 27.7 bits (60), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 4/46 (8%)

Query: 83   IDVTANPDYSKFESLIVVMDLMETDLYQIINSHQP----ITVDHHR 124
            ID+       +F ++  ++D ME D+Y  +N   P    I +DH++
Sbjct: 3474 IDMDETKGKKEFSNMDTILDDMEDDIYYDVNDENPSVDDIPMDHNK 3519



>EAY10811.1 on XP_001351319  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2646

 Score = 26.9 bits (58), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 11/24 (45%), Positives = 14/24 (58%)

Query: 100  VMDLMETDLYQIINSHQPITVDHH 123
             MD ME D+Y  +N H   TVD +
Sbjct: 2592 TMDNMEDDIYYDVNDHDTSTVDSN 2615



>EAY10811.1 on XP_001348176  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3119

 Score = 26.6 bits (57), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 4/46 (8%)

Query: 83   IDVTANPDYSKFESLIVVMDLMETDLYQIINSHQP----ITVDHHR 124
            ID+       +F ++  ++D ME D+Y  +N   P    I +DH++
Sbjct: 3040 IDMDDGKPKKEFSNMDTILDDMEHDIYYDVNDENPSVNDIPMDHNK 3085




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10816.1 hypothetical protein TVAG_258180 [Trichomonas
vaginalis G3]
         (897 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_820072   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.82 
XP_817842   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.86 
XP_001349036  PfEMP1  (Establishment)  [Plasmodium falciparum]         29   1.6  
XP_001609667  variant erythrocyte surface antigen-1, alpha subun...    29   1.6  
AAY44833  MSA-1  (Invasion)  [Babesia bovis]                           27   6.9  
XP_827749  VSG  (Establishment)  [Trypanosoma brucei]                  27   7.2  

>EAY10816.1 on XP_820072   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 755

 Score = 29.6 bits (65), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 17/69 (24%), Positives = 31/69 (44%)

Query: 42  KDSVLEPFRHEYAKLFGILQKSMTNQARYIEKGRVIESEIVGNKAKVRTVSKLAEEDSRS 101
           KD+         A L  +L  +++    +I++   + + +  N  KVR   +L E DSR 
Sbjct: 484 KDAFFSNLTIPTAGLVAVLSNALSGDDTWIDEYLCLNATVTPNAKKVRYGFQLTEPDSRV 543

Query: 102 ISNLNEDRD 110
           +  +N   D
Sbjct: 544 MWPVNTRGD 552



>EAY10816.1 on XP_817842   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 897

 Score = 29.6 bits (65), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 16/46 (34%), Positives = 23/46 (50%)

Query: 222 QMERQHLFELERDRENTRNRLKEMKQQVADKTIEVAQEQETVKQID 267
           QM  Q L E   D+EN  +R   +    ++K + V Q    VK+ID
Sbjct: 143 QMRTQVLVECSSDKENCASREAALAVSQSEKKVRVRQPTTVVKEID 188



>EAY10816.1 on XP_001349036  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2192

 Score = 28.9 bits (63), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 5/90 (5%)

Query: 421  KNQAHNIDCEISIIKQHLQETQKKIYSI-ETEREHYSEELSAATSQFL--HGQETLKDLA 477
            KN  +NI    S  KQ + + QKKI  I +       +E ++   +F   HG +  K + 
Sbjct: 1097 KNGGNNIILNASGNKQDMDKIQKKIDKILKQSASKPGQEPNSKREEFWTTHGPDIWKGMV 1156

Query: 478  SKVQSKTAEIVNGDRHVAQQQSLYEKVRSE 507
              +  K  E  NGD+ + +  ++Y+K   E
Sbjct: 1157 CALTYK--ESKNGDKTIVKDGAVYDKFFGE 1184



>EAY10816.1 on XP_001609667  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1303

 Score = 28.9 bits (63), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 31/147 (21%), Positives = 71/147 (48%), Gaps = 14/147 (9%)

Query: 240 NRLKEMKQQVADKTIEVAQEQET--------VKQIDKKVREQKRRFESAKSE---KQEIS 288
            +LK++ +++ +  +++   QE         +K + KK++E K+  E A+ E    +++ 
Sbjct: 659 GKLKDVLEKIGEVVVQLGNAQEALERRKGEEIKGVQKKLQEAKKGLEEARKELETGEDLD 718

Query: 289 EKCQKYQKEL--DLLNSQIVAIEADIANNHNALIERQKVADSVSNQAQQQNNNRDKIRLK 346
           E   K  KE   +L N    A+   +AN  N      +VA + ++  ++ ++ +DKI   
Sbjct: 719 EDDLKEAKEALGELTNGGGGALHT-LANGSNTAGSLHQVATAGADWQKEYSSAKDKISEV 777

Query: 347 VQGLQERYEGIRKDTDAVRTQVDATED 373
           +  +QE    ++ +   V + ++  +D
Sbjct: 778 IHKIQEVLTALQTEVPQVSSHLNGHKD 804



>EAY10816.1 on AAY44833  MSA-1  (Invasion)  [Babesia bovis]
          Length = 273

 Score = 26.6 bits (57), Expect = 6.9,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 46/109 (42%), Gaps = 7/109 (6%)

Query: 518 VEAEITELENNFGRMKFAIEQHKDDIHRKAMEKLRDIESLKRTEDEDSQLREKLTQVEIV 577
           V+A + + +N   RMK   E  K+D    +   +   E  K  E +   L   + Q+   
Sbjct: 75  VDALVRDAKNGLVRMKNVAELLKEDKQFSSEGFITSTEQAKSVEGDFESLMYSVIQIYHK 134

Query: 578 ITTLNSTIVANDAEISKINLSIKHAEDSLQKHLHRLENVKKDSDAISNK 626
              LN        E++++  + K +E+S+ +     +    D D +SN+
Sbjct: 135 CVALNK-------EVNRLFPNAKESEESIAEMKKYFKKNIYDKDTVSNQ 176



>EAY10816.1 on XP_827749  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 516

 Score = 26.6 bits (57), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 32/129 (24%), Positives = 57/129 (44%), Gaps = 13/129 (10%)

Query: 157 ELSQLKARRVELTKQFEELNQQIPQLKENNRITQEKKAAKDKEIQDSIAELKRIDETVED 216
           ELS  K   +E   Q+E +   + ++ +NNR  Q   A + ++ Q      +  DET E 
Sbjct: 364 ELSYNKLENLETDAQYETILLYLSKVSQNNR-EQACTAVRQEQKQ------QETDETCEK 416

Query: 217 KQREDQMERQHLFELERDRENTRNRLKEMKQQVADKTIEV------AQEQETVKQIDKKV 270
           K  ED  +    ++ E D +     L    +QV +K   +       ++QE  K +D K 
Sbjct: 417 KGTEDNYKDGCKWDGEGDNKKCVKDLDYKPKQVEEKDDGIKEEKCAGKQQEDCKSMDCKW 476

Query: 271 REQKRRFES 279
           + +  ++ S
Sbjct: 477 KGENYKYSS 485




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10817.1 B-box zinc finger family protein [Trichomonas
vaginalis G3]
         (673 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ABA06448  MSA-2a/b T-1  (Invasion)  [Babesia bovis]                    28   2.3  
XP_822014   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   4.6  
XP_845069  VSG  (Establishment)  [Trypanosoma brucei]                  27   6.0  
XP_822006   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   6.2  

>EAY10817.1 on ABA06448  MSA-2a/b T-1  (Invasion)  [Babesia bovis]
          Length = 284

 Score = 27.7 bits (60), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 23/118 (19%)

Query: 312 EAEDTVQNLQTNLTNVLAEIKRIADAASNEAKQLIGRRIVEAKSSLAEL--QRKYDQLKS 369
           E++DTV      LT +  E+K +A+      K+   +  +E K    ++  +   D L +
Sbjct: 24  ESQDTV------LTTLHDEMKDVANYIKFLTKE-ENKDYLEGKFKEVDMPSENSLDALSA 76

Query: 370 TNTMLENYYTDGDPVPFLQEFHRTEVLDKDIETTLDLQRVNGIKADVAVFGSLSIQSP 427
              +L+ +    D VPF     +T + D+D+   LDLQ ++ I      F SL ++ P
Sbjct: 77  FVQILDFF---KDKVPF-----KTSLFDEDVLRNLDLQELDSI------FNSLRLRVP 120



>EAY10817.1 on XP_822014   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 950

 Score = 26.9 bits (58), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)

Query: 608 GTPDSFAFGRDDLVLAGNFDRCASTIENTFGIGLEYGSEAAQKFLAGQPRFKADN 662
           G P +   G D  +L GN+ R A+T      +G E+G   A+  ++G+   K  N
Sbjct: 237 GRPTTLVKGSDIYMLVGNYSRTAATGTEE-SVGDEWGLLLARGNVSGEESGKRVN 290



>EAY10817.1 on XP_845069  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 477

 Score = 26.6 bits (57), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 6/37 (16%)

Query: 344 QLIGRRIVEAKSSLAELQRKYDQLKSTNTMLENYYTD 380
           QL  R++ E K      +R+ DQL+ T T  ENY  D
Sbjct: 351 QLTTRQMEEVK------ERRLDQLRKTKTEAENYPRD 381



>EAY10817.1 on XP_822006   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 845

 Score = 26.6 bits (57), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)

Query: 608 GTPDSFAFGRDDLVLAGNFDRCASTIENTFGIGLEYGSEAAQKFLAGQPRFKADN 662
           G P +   G D  +L GN+ R A+T      +G E+G   A+  ++G+   K  N
Sbjct: 182 GRPTTLVKGSDIYMLVGNYSRTAATNPKE-SVGDEWGLLLARGNVSGEESGKRVN 235




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10818.1 hypothetical protein TVAG_258200 [Trichomonas
vaginalis G3]
         (372 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10820.1 glycosyl transferase, group 1 family protein
[Trichomonas vaginalis G3]
         (1572 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10822.1 La domain containing protein [Trichomonas
vaginalis G3]
         (232 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001610721  variant erythrocyte surface antigen-1, alpha subun...    28   0.46 
XP_001611900  variant erythrocyte surface antigen-1, alpha subun...    27   1.0  
XP_001610496  variant erythrocyte surface antigen-1, beta subuni...    25   3.1  
AAL38221  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   25   4.9  
AAL38220  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   25   4.9  
AAL38222  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   25   4.9  
AAL38218  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   25   5.0  
AAL38219  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   25   5.0  

>EAY10822.1 on XP_001610721  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1331

 Score = 28.1 bits (61), Expect = 0.46,   Method: Composition-based stats.
 Identities = 15/40 (37%), Positives = 23/40 (57%)

Query: 193  QLKGILFSDFKANLVSKKKGTPKKDTPKKDTPKKDTPKKK 232
            Q+ G +F  F+  + +K++G  KKD  KK    KD  KK+
Sbjct: 978  QVLGDVFGFFRGGVGNKEEGKNKKDQNKKCEHDKDPSKKE 1017



>EAY10822.1 on XP_001611900  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1226

 Score = 26.9 bits (58), Expect = 1.0,   Method: Composition-based stats.
 Identities = 12/32 (37%), Positives = 17/32 (53%)

Query: 193  QLKGILFSDFKANLVSKKKGTPKKDTPKKDTP 224
            Q+ G +F  F+  +  K+KG P K    KD P
Sbjct: 981  QVLGDVFGFFRGGVGEKEKGKPPKGEQDKDVP 1012



>EAY10822.1 on XP_001610496  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 1159

 Score = 25.4 bits (54), Expect = 3.1,   Method: Composition-based stats.
 Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 6/35 (17%)

Query: 202 FKANLVSKKKGTPK------KDTPKKDTPKKDTPK 230
           F+A     K  TPK      KDT  KDTP    P+
Sbjct: 369 FRAGSAGAKGITPKAGSSTAKDTTNKDTPSPRKPR 403



>EAY10822.1 on AAL38221  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2965

 Score = 25.0 bits (53), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 5/40 (12%)

Query: 123  HIEGFDETETLDDIKAL--FKEQYP---RSALRTEMRKIN 157
            HI+ FD+T+  DDI      +++Y     + ++TE+R IN
Sbjct: 1313 HIKHFDDTKHFDDIYHADDTRDEYHIALSNYIKTELRNIN 1352



>EAY10822.1 on AAL38220  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2957

 Score = 25.0 bits (53), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 5/40 (12%)

Query: 123  HIEGFDETETLDDIKAL--FKEQYP---RSALRTEMRKIN 157
            HI+ FD+T+  DDI      +++Y     + ++TE+R IN
Sbjct: 1307 HIKHFDDTKHFDDIYHADDTRDEYHIALSNYIKTELRNIN 1346



>EAY10822.1 on AAL38222  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2976

 Score = 25.0 bits (53), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 5/40 (12%)

Query: 123  HIEGFDETETLDDIKAL--FKEQYP---RSALRTEMRKIN 157
            HI+ FD+T+  DDI      +++Y     + ++TE+R IN
Sbjct: 1320 HIKHFDDTKHFDDIYHADDTRDEYHIALSNYIKTELRNIN 1359



>EAY10822.1 on AAL38218  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2977

 Score = 25.0 bits (53), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 5/40 (12%)

Query: 123  HIEGFDETETLDDIKAL--FKEQYP---RSALRTEMRKIN 157
            HI+ FD+T+  DDI      +++Y     + ++TE+R IN
Sbjct: 1317 HIKHFDDTKHFDDIYHADDTRDEYHIALSNYIKTELRNIN 1356



>EAY10822.1 on AAL38219  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2969

 Score = 25.0 bits (53), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 5/40 (12%)

Query: 123  HIEGFDETETLDDIKAL--FKEQYP---RSALRTEMRKIN 157
            HI+ FD+T+  DDI      +++Y     + ++TE+R IN
Sbjct: 1309 HIKHFDDTKHFDDIYHADDTRDEYHIALSNYIKTELRNIN 1348




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10823.1 hypothetical protein TVAG_258250 [Trichomonas
vaginalis G3]
         (899 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609163  variant erythrocyte surface antigen-1, alpha subun...    29   1.3  
XP_001609101  variant erythrocyte surface antigen-1, alpha subun...    29   1.5  
XP_001349434  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   5.0  

>EAY10823.1 on XP_001609163  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1360

 Score = 29.3 bits (64), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 48/219 (21%), Positives = 85/219 (38%), Gaps = 30/219 (13%)

Query: 335  IKETEQQRGKLQDTLDQLTTLTREKEKLLSKLQIERNQANSEYKNSAKGTIEISNQIHEL 394
            + E E+ + K + TLD L+TL    E LLS     +            G  + S++  + 
Sbjct: 845  VTEVEKHQAKQKVTLDALSTLVSAIEDLLSICNTPK----------CPGCTKHSDKCGQP 894

Query: 395  EDKIIAHVTEQTNMKRDTIAAQNEVQK-VRDQI------EEKDRELSQLQNEAMKLKIDR 447
                +     QT ++  T    + +Q  + D++      E  D E  +    A  L+   
Sbjct: 895  PKPTVC----QTCLQPTTTGVPSPLQAFLEDRLPGFSCKEVPDTENPEYPPAASHLR--H 948

Query: 448  LNITGQCAKFERGLQEIVEELKQKDALINQ-YELQIRKNNVNIEKLQSEVDKLNRKYEEL 506
               +GQC     G +    E   +D    + Y +    +N N+  +QS V  L R    L
Sbjct: 949  CGGSGQCCPLPMGFRGQFHEGSIRDCTGQRLYGILYFFSNENM--MQSCVYTLVRVTAAL 1006

Query: 507  TSAQN---GEEYGPLERKIRVLE-SKIQQSDETAQENQA 541
            ++      G+ +G     +   E  K Q+ +ET+ E+  
Sbjct: 1007 SATTPQVLGDVFGFFRGGVGNKERGKPQKGEETSCEHTG 1045



>EAY10823.1 on XP_001609101  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1359

 Score = 28.9 bits (63), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 48/219 (21%), Positives = 85/219 (38%), Gaps = 30/219 (13%)

Query: 335  IKETEQQRGKLQDTLDQLTTLTREKEKLLSKLQIERNQANSEYKNSAKGTIEISNQIHEL 394
            + E E+ + K + TLD L+TL    E LLS     +            G  + S++  + 
Sbjct: 845  VTEVEKHQAKQKVTLDALSTLVSAIEDLLSICNTPK----------CPGCTKHSDKCGQP 894

Query: 395  EDKIIAHVTEQTNMKRDTIAAQNEVQK-VRDQI------EEKDRELSQLQNEAMKLKIDR 447
                +     QT ++  T    + +Q  + D++      E  D E  +    A  L+   
Sbjct: 895  PKPTVC----QTCLQPTTTGVPSPLQAFLEDRLPGFSCKEVPDTENPEYPPAASHLR--H 948

Query: 448  LNITGQCAKFERGLQEIVEELKQKDALINQ-YELQIRKNNVNIEKLQSEVDKLNRKYEEL 506
               +GQC     G +    E   +D    + Y +    +N N+  +QS V  L R    L
Sbjct: 949  CGGSGQCCPLPMGFRGQFHEGSIRDCTGQRLYGILYFFSNENM--MQSCVYTLVRVTAAL 1006

Query: 507  TSAQN---GEEYGPLERKIRVLE-SKIQQSDETAQENQA 541
            ++      G+ +G     +   E  K Q+ +ET+ E+  
Sbjct: 1007 SATTPQVLGDVFGFFRGGVGNKERGKPQKGEETSCEHTG 1045



>EAY10823.1 on XP_001349434  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2109

 Score = 27.3 bits (59), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)

Query: 354  TLTREKEKLLSKLQIERNQANSEYKNSAKGTIEISNQIHELEDKIIAHV 402
            T  RE+ + L K+Q +  Q + EYK S  G  E    I E +  II++ 
Sbjct: 1157 TFCRERTRRLEKIQGDCTQGDDEYKCSGYG--ENCKDIREQDYSIISNF 1203




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10824.1 Ser/Thr protein phosphatase, putative
[Trichomonas vaginalis G3]
         (336 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10825.1 hypothetical protein TVAG_258270 [Trichomonas
vaginalis G3]
         (230 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAX77225  Falcipain 2'  (Cysteine protease)  [Plasmodium falcipa...    28   0.54 
XP_805733   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   1.7  
XP_001349738  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   2.7  
XP_001351564  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   2.9  
XP_001347833  Falcipain 3  (Cysteine protease)  [Plasmodium falc...    25   5.9  
XP_819490   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   6.4  
XP_829768  VSG  (Establishment)  [Trypanosoma brucei]                  24   6.7  

>EAY10825.1 on AAX77225  Falcipain 2'  (Cysteine protease)  [Plasmodium
           falciparum]
          Length = 484

 Score = 27.7 bits (60), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)

Query: 20  FTNDYLAMKSEK---EPKYKQQRTPYSQSPKKYNKNDNF 55
           F N YL+++S K     KY   +  Y +  KKY  N+NF
Sbjct: 222 FKNKYLSLRSSKPLKNSKYLLDQMNYEEVIKKYKGNENF 260



>EAY10825.1 on XP_805733   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 823

 Score = 26.2 bits (56), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 11/70 (15%)

Query: 108 RLGKKSQPNPALKQPDPPIVPPRSTPENTNDGSAIRSFNPRPLNQQSEHAPQTQTEIPQT 167
           R  K S PNP  +    P +PPRST E          F   P+ +++E +  +       
Sbjct: 668 RASKVSIPNPGEESRSVPEIPPRSTGE----------FEATPV-KRNEESHGSHAAFGNG 716

Query: 168 SPKREDTKQN 177
            P+R++T+ N
Sbjct: 717 DPERQNTRPN 726



>EAY10825.1 on XP_001349738  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2162

 Score = 25.8 bits (55), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 11/41 (26%), Positives = 25/41 (60%), Gaps = 2/41 (4%)

Query: 13  RPQFDEGFTNDYLAMKSE--KEPKYKQQRTPYSQSPKKYNK 51
           + Q+++GF  DY  +K +  K+P+++  ++ Y+  P   N+
Sbjct: 576 KSQYEDGFDKDYCVLKDDKKKKPEHRTIKSYYTLFPNWINE 616



>EAY10825.1 on XP_001351564  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2207

 Score = 25.8 bits (55), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 11/41 (26%), Positives = 25/41 (60%), Gaps = 2/41 (4%)

Query: 13  RPQFDEGFTNDYLAMKSE--KEPKYKQQRTPYSQSPKKYNK 51
           + Q+++GF  DY  +K +  K+P+++  ++ Y+  P   N+
Sbjct: 576 KSQYEDGFDKDYCVLKDDKKKKPEHRTIKSYYTLFPNWINE 616



>EAY10825.1 on XP_001347833  Falcipain 3  (Cysteine protease)  [Plasmodium
           falciparum]
          Length = 482

 Score = 24.6 bits (52), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%)

Query: 20  FTNDYLAMKSEK---EPKYKQQRTPYSQSPKKYNKNDNF 55
           F + YL ++S K     KY   +  Y    KKY  N+NF
Sbjct: 220 FKSKYLTLRSSKPLKNSKYLLDQINYDAVIKKYKGNENF 258



>EAY10825.1 on XP_819490   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 997

 Score = 24.6 bits (52), Expect = 6.4,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 19/49 (38%), Gaps = 10/49 (20%)

Query: 108 RLGKKSQPNPALKQPDPPIVPPRSTPENTNDGSAIRSFNPRPLNQQSEH 156
           R  K   PNP  +    P +PPR T E          F   P+ +  EH
Sbjct: 691 RASKVPIPNPGEESRSVPEIPPRPTGE----------FEATPVKRNEEH 729



>EAY10825.1 on XP_829768  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 485

 Score = 24.3 bits (51), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)

Query: 4   EFTFSIAGDRPQFDEGFTNDYLAMKSEKEPKY-KQQRTPYSQSPKKYNKN 52
           E+  ++ GD+PQ  +    D  A   +KEP+  K Q       P K+N+N
Sbjct: 356 EYLKALKGDQPQLQK-IAGDQTAHPKKKEPECNKHQSKTECTEPCKWNEN 404




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10826.1 acetyl-CoA acyltransferases family protein
[Trichomonas vaginalis G3]
         (387 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_806901   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   0.43 
AAX07983  alpha-9 giardin  (Others)  [Giardia duodenalis]              27   1.2  
Q4VPP0  Giardin subunit alpha-9  (Others)  [Giardia duodenalis]        27   1.2  
XP_803984   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.5  
XP_815971   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.7  
XP_814919   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   4.5  
XP_805247   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   6.1  
XP_811704   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   6.5  
XP_808669   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   6.5  
XP_817493   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   6.5  
XP_815173   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   8.4  

>EAY10826.1 on XP_806901   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 369

 Score = 28.9 bits (63), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 10/37 (27%), Positives = 20/37 (54%)

Query: 182 SFDRAAKAWEEHCFDGQIVPIQTKTGEYKVDESIYKL 218
           S++   K W   C DG+++   + T E + D + Y++
Sbjct: 59  SYNNKEKKWTLLCGDGKVIKEHSSTWETRTDSTQYRV 95



>EAY10826.1 on AAX07983  alpha-9 giardin  (Others)  [Giardia duodenalis]
          Length = 255

 Score = 27.3 bits (59), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 9/51 (17%)

Query: 245 SDGAAALAICSSEFAAEHNLKPIAKILSFGESGIDPAEFPLAPADAVKKAL 295
           S   +AL   +S++A++H  K +    S          + + PADA+KKAL
Sbjct: 18  SKNESALVQLTSQYASKHRDKVVINYKSI---------YGMYPADAIKKAL 59



>EAY10826.1 on Q4VPP0  Giardin subunit alpha-9  (Others)  [Giardia duodenalis]
          Length = 255

 Score = 27.3 bits (59), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 9/51 (17%)

Query: 245 SDGAAALAICSSEFAAEHNLKPIAKILSFGESGIDPAEFPLAPADAVKKAL 295
           S   +AL   +S++A++H  K +    S          + + PADA+KKAL
Sbjct: 18  SKNESALVQLTSQYASKHRDKVVINYKSI---------YGMYPADAIKKAL 59



>EAY10826.1 on XP_803984   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 794

 Score = 27.3 bits (59), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 13/35 (37%), Positives = 17/35 (48%)

Query: 283 FPLAPADAVKKALSKVHLTTSDIDLWEFNEAFASV 317
           FPL   D   K +S +  +T D   WE  E  +SV
Sbjct: 277 FPLTAKDESNKVVSLITYSTDDGQKWEIPEGVSSV 311



>EAY10826.1 on XP_815971   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 550

 Score = 27.3 bits (59), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 13/35 (37%), Positives = 17/35 (48%)

Query: 283 FPLAPADAVKKALSKVHLTTSDIDLWEFNEAFASV 317
           FPL   D   K +S +  +T D   WE  E  +SV
Sbjct: 277 FPLTAKDESNKVVSLITYSTDDGQKWEIPEGVSSV 311



>EAY10826.1 on XP_814919   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 854

 Score = 25.8 bits (55), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 283 FPLAPADAVKKALSKVHLTTSDIDLWEFNEAFAS 316
           FPL   D   K +S +  +T D   WE  E  +S
Sbjct: 344 FPLTATDENDKVVSLITYSTDDGQKWEIPEGVSS 377



>EAY10826.1 on XP_805247   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 870

 Score = 25.4 bits (54), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 12/34 (35%), Positives = 15/34 (44%)

Query: 283 FPLAPADAVKKALSKVHLTTSDIDLWEFNEAFAS 316
           FPL   D   K  S +  +T D   WE  E  +S
Sbjct: 277 FPLTAKDENNKVFSLITYSTDDGQKWEIPEGVSS 310



>EAY10826.1 on XP_811704   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 745

 Score = 25.4 bits (54), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 12/34 (35%), Positives = 15/34 (44%)

Query: 283 FPLAPADAVKKALSKVHLTTSDIDLWEFNEAFAS 316
           FPL   D   K  S +  +T D   WE  E  +S
Sbjct: 277 FPLTAKDENNKVFSLITYSTDDGQKWEIPEGVSS 310



>EAY10826.1 on XP_808669   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 533

 Score = 25.4 bits (54), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 12/34 (35%), Positives = 15/34 (44%)

Query: 283 FPLAPADAVKKALSKVHLTTSDIDLWEFNEAFAS 316
           FPL   D   K  S +  +T D   WE  E  +S
Sbjct: 276 FPLTAKDENNKVFSLITYSTDDGQKWEIPEGVSS 309



>EAY10826.1 on XP_817493   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 765

 Score = 25.4 bits (54), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 12/34 (35%), Positives = 15/34 (44%)

Query: 283 FPLAPADAVKKALSKVHLTTSDIDLWEFNEAFAS 316
           FPL   D   K  S +  +T D   WE  E  +S
Sbjct: 278 FPLTAKDENDKVFSLITYSTDDGQKWEIPEGVSS 311



>EAY10826.1 on XP_815173   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 661

 Score = 25.0 bits (53), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 283 FPLAPADAVKKALSKVHLTTSDIDLWEFNEAFAS 316
           FPL   D   K +S +  +T D   WE  E  +S
Sbjct: 279 FPLTAKDENDKVVSLITYSTDDGQKWEIPEGVSS 312




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10832.1 Family T2, asparaginase-like threonine
peptidase [Trichomonas vaginalis G3]
         (306 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_821397   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.63 
CAC20154  Eimepsin  (Protease)  [Eimeria tenella]                      27   1.2  
XP_812697   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.2  
XP_843642  VSG  (Establishment)  [Trypanosoma brucei]                  25   4.3  
XP_821381   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   4.5  
XP_821088   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   7.9  

>EAY10832.1 on XP_821397   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 932

 Score = 28.5 bits (62), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 9/104 (8%)

Query: 11  GASDVPEQFREESLVWVRKAVERGAEVARTGAPAEDIVAATVCVLED--CPVSDA----G 64
           GA++ P Q  E +  W     E G  V   GAP    V + V  + +  C  SDA    G
Sbjct: 61  GAAEAPGQSSEPNYKWKNIKNEEGVTVESLGAPGLLKVGSDVFAVAEAQCKKSDANIFTG 120

Query: 65  FGAVFNAQGSHQMDAGIMTGDKRYGAILSLHGVQNP---INVAR 105
             +    + + +    ++ G K    +L   G ++P   I+V+R
Sbjct: 121 IASQLLTKDNAEKPMEVLNGAKDKTQVLEEDGSEDPKKRIDVSR 164



>EAY10832.1 on CAC20154  Eimepsin  (Protease)  [Eimeria tenella]
          Length = 255

 Score = 26.9 bits (58), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 4/42 (9%)

Query: 134 PDEKFETAYNRYIQDQFSGHGDPLDLFVQPPPDHGTVGCVAR 175
           P EKF+  Y+       S  GDP   F+Q    +GT  CV R
Sbjct: 140 PHEKFDPKYSSTFSPIRSLTGDPAVAFIQ----YGTGACVLR 177



>EAY10832.1 on XP_812697   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 911

 Score = 26.6 bits (57), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 4/33 (12%)

Query: 142 YNRYIQDQ----FSGHGDPLDLFVQPPPDHGTV 170
           YNR + +     F+ + DP+ LF + P +H TV
Sbjct: 721 YNRPLDEAKIGAFNPNKDPIQLFEEKPSEHSTV 753



>EAY10832.1 on XP_843642  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 534

 Score = 25.4 bits (54), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 19/72 (26%), Positives = 26/72 (36%), Gaps = 1/72 (1%)

Query: 153 HGDPLDLFVQPPPDHGTVGCVARDIHGHIAAGTSTGGTPFAPTGRVGDSPFP-GCGVYAN 211
           H   L  + +  P    +  VA ++   IA  T+ G       G+    P   GC     
Sbjct: 262 HQTCLARYHKNAPTADRIRAVAANVQHTIAQSTANGNKITHILGKTNRDPATNGCNGDVG 321

Query: 212 DEEGCCSCTGYG 223
           D  GCC   G G
Sbjct: 322 DNSGCCVYYGRG 333



>EAY10832.1 on XP_821381   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 934

 Score = 25.4 bits (54), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 9/104 (8%)

Query: 11  GASDVPEQFREESLVWVRKAVERGAEVARTGAPAEDIVAATVCVLED--CPVSDA----G 64
           GA++ P Q  E +  W     E G  V   G P    V + V  + +  C  SDA    G
Sbjct: 61  GAAEAPGQSSEPNYKWKNIKNEGGVTVESLGVPGLLKVGSDVFAVAEAQCKKSDANIFTG 120

Query: 65  FGAVFNAQGSHQMDAGIMTGDKRYGAILSLHGVQNP---INVAR 105
             +    + + +    ++ G K    +L   G ++P   I+V+R
Sbjct: 121 IASQLLTKDNAEKPMEVLNGAKDKTQVLEEDGSEDPKKRIDVSR 164



>EAY10832.1 on XP_821088   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 910

 Score = 24.6 bits (52), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 4/33 (12%)

Query: 142 YNRYIQDQ----FSGHGDPLDLFVQPPPDHGTV 170
           YNR + +     F+ + DP+ L  + P +H TV
Sbjct: 720 YNRPLNEAEIGAFNPNKDPIQLLEEKPSEHSTV 752




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10833.1 Kelch motif family protein [Trichomonas
vaginalis G3]
         (386 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_804421   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   1.4  
XP_803651   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   3.6  
XP_844686  VSG  (Establishment)  [Trypanosoma brucei]                  26   4.6  
XP_827758  VSG  (Establishment)  [Trypanosoma brucei]                  25   6.3  
XP_804241   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   7.4  

>EAY10833.1 on XP_804421   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 864

 Score = 27.7 bits (60), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 14/113 (12%)

Query: 51  TLYVYGGHDSNNNSLNDLLTFNEMLGWSYASANKITTTINRKVII------EQGFNYHPP 104
           T+   G   +NNNS +   T   +   S  +A K   T NR+ +        +G    PP
Sbjct: 34  TVKFEGSERTNNNSTHTAHTHTHICMHSRVAAVKAPRTHNRRCVTGSSGRRREGRESEPP 93

Query: 105 SPLELTPIPLARS-FHTAVVYDSFMIVAG-GNATELDGRIYFLDTSPDAHLTW 155
            P       ++R  F +AV+    M+  G G   + D      ++SP  +  W
Sbjct: 94  RP------NMSRHVFTSAVLLLVVMMCCGTGGGAQADEPASGAESSPKPYFDW 140



>EAY10833.1 on XP_803651   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 238

 Score = 25.8 bits (55), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 5/64 (7%)

Query: 174 HTAVIWKNYMVIFGGTDGESPLNADVLFLDLKKFKWTVKSDIKDLPKTYGHAAF--VSND 231
           ++AV+    MV+F G    S   ADV      +FKW   +D+K+  K+ G      V ND
Sbjct: 45  YSAVLIFLVMVMFCGRGAAS---ADVKESSSVQFKWEGITDVKEAVKSLGVPGLLKVEND 101

Query: 232 LMYI 235
           +  +
Sbjct: 102 VFAV 105



>EAY10833.1 on XP_844686  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 509

 Score = 25.8 bits (55), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 28/110 (25%), Positives = 40/110 (36%), Gaps = 41/110 (37%)

Query: 43  KDNSSGRTTLYVYGGHDSNNNSL------------NDLLTFNEMLGWSYASANKITTTIN 90
           K++ +G T + ++ G D+N +              NDLL             NKI T I 
Sbjct: 254 KEDKTGVTAIKIFAGDDANTSCAELKDATKKSEKDNDLLI------------NKICTYIT 301

Query: 91  RKVIIEQGFNYHPPSPL-----ELTPIPLARSFHTAVVYDSFMIVAGGNA 135
           +            P P       LTP  LA +    V + SF+  A G A
Sbjct: 302 K------------PDPQIITISSLTPAMLANTTAVQVAFRSFVHAATGKA 339



>EAY10833.1 on XP_827758  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 487

 Score = 25.4 bits (54), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 282 NNKLYLIGGYGVTDNTIETGCVNEVNIV 309
           +N+L  I G+G T     TGC NE   +
Sbjct: 204 HNELLTIWGHGSTGTAPSTGCQNEATFI 231



>EAY10833.1 on XP_804241   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 765

 Score = 25.4 bits (54), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 2/63 (3%)

Query: 309 VDMNTWKSVSIVPSMMNGAGPGPLCGHTAVEVNNQIIIFGGCD--RLPLLDGRWVFYGFN 366
           V+  TW++ ++  S  +      LC  TAV  +N++ +  G D  R    D  WV  G++
Sbjct: 179 VNAGTWRAHTVFGSRNSNDRVCFLCRPTAVAKDNKVFLLVGIDTTRYESDDDMWVKNGWD 238

Query: 367 SEL 369
            +L
Sbjct: 239 IKL 241




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10834.1 hypothetical protein TVAG_258360 [Trichomonas
vaginalis G3]
         (215 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_966307  PfEMP1  (Establishment)  [Plasmodium falciparum]            33   0.012
XP_001350409  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   0.90 
XP_001347691  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   1.8  
XP_809489   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   4.3  

>EAY10834.1 on XP_966307  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2238

 Score = 33.1 bits (74), Expect = 0.012,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 1/65 (1%)

Query: 152  VLEEVPEEDEAESNDEEAETQPPKEIPPPPQAVPTLQ-PLPSIPKIEEQFSRNARIVKPL 210
            VL+  P+++E E   E A+T P K      +  P  + P P   K E+   +NA   KP 
Sbjct: 1661 VLKTPPKQEEGEEKCEPAQTAPKKPAADSERQTPEEKLPPPPAAKEEKPPKQNAEKTKPK 1720

Query: 211  PSSQP 215
             S +P
Sbjct: 1721 RSPRP 1725



>EAY10834.1 on XP_001350409  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2223

 Score = 27.3 bits (59), Expect = 0.90,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 16/40 (40%)

Query: 155  EVPEEDEAESNDEEAETQPPKEIPPPPQAVPTLQPLPSIP 194
            + PE  +     E+     P+E  PPP   P + P    P
Sbjct: 1711 KAPEPTQPADGGEQTPVLKPEEEAPPPAQAPDVAPPARAP 1750



>EAY10834.1 on XP_001347691  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2182

 Score = 26.2 bits (56), Expect = 1.8,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 4/41 (9%)

Query: 159  EDEAESNDEEAETQPPKEIPPPPQAVP----TLQPLPSIPK 195
            +DE  S +EE   + PK  P PP+          P P+ PK
Sbjct: 1670 DDEDLSLEEENTVEQPKFCPKPPEPKAEEKGACDPAPTTPK 1710



>EAY10834.1 on XP_809489   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 787

 Score = 25.0 bits (53), Expect = 4.3,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 3/71 (4%)

Query: 144 IEPFLDYVVLEEVPEEDEAESNDEEAETQPPKEIPPPPQAVPTL---QPLPSIPKIEEQF 200
           I+P  +  V++EV ++  +    ++A  +PP+E      A  T      +    + EEQ 
Sbjct: 497 IQPDSETSVIKEVKQDATSSQQRQDAPDRPPEEKNKKAAASVTYSDSHAVADTKRREEQM 556

Query: 201 SRNARIVKPLP 211
            + A  V  LP
Sbjct: 557 EKAATDVDDLP 567




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10836.1 glutaminyl-tRNA synthetase family protein
[Trichomonas vaginalis G3]
         (743 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_819737   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           34   0.035
XP_808156   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           32   0.16 
XP_812956   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           31   0.34 
XP_818394   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.51 
XP_813123   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.58 
XP_804625   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.74 
XP_803953   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   1.4  
XP_804892   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   1.7  
XP_805883   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   2.4  
XP_808201   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   2.7  
XP_821102   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   6.0  
XP_805733   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   6.2  
XP_810574   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   6.5  
XP_804223   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   8.5  
XP_802557   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   9.5  

>EAY10836.1 on XP_819737   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1112

 Score = 33.9 bits (76), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)

Query: 528 DSLDSIQRADLDENSPRAFCVQDPIKVTLQNLKEEKIIEAPLFPKKPEKGNR-KLHL 583
           D L  I R   + ++ + + VQ      +   KE  +I AP++PKK  KG + +LHL
Sbjct: 406 DHLKPITRVWGNSHNRKGYGVQSGSTTAIIEGKEVMLITAPVYPKKENKGGKGRLHL 462



>EAY10836.1 on XP_808156   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1058

 Score = 32.0 bits (71), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)

Query: 528 DSLDSIQRADLDENSPRAFCVQDPIKVTLQNLKEEKIIEAPLFPKKPEKGNR-KLHL 583
           D L SI R   + +  + + VQ      +   K+  +I AP++PK+  KG + +LHL
Sbjct: 343 DHLKSITRVWGNSHKRKGYGVQSGSTTAIIEEKKVMLITAPVYPKEENKGGKGRLHL 399



>EAY10836.1 on XP_812956   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1005

 Score = 30.8 bits (68), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 533 IQRADLDENSPRAFCVQDPIKVTLQNLKEEKIIEAPLFPKKP-EKGNRKLHL 583
           I R   +  + + + VQ      +   KE  +I AP++PK+  E GN +LHL
Sbjct: 305 INRVWGNSRNRKGYGVQSGSTTAIIEEKEVMLITAPVYPKEENEGGNGRLHL 356



>EAY10836.1 on XP_818394   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1059

 Score = 30.0 bits (66), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 16/55 (29%), Positives = 28/55 (50%)

Query: 529 SLDSIQRADLDENSPRAFCVQDPIKVTLQNLKEEKIIEAPLFPKKPEKGNRKLHL 583
           S + I R   + ++ + + VQ      +   KE  +I AP++PK  + G  +LHL
Sbjct: 339 SGEPINRVWGNSHNRKGYGVQSGSTTAIIEEKEVMLITAPVYPKDNKGGKGRLHL 393



>EAY10836.1 on XP_813123   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1048

 Score = 30.0 bits (66), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 16/55 (29%), Positives = 28/55 (50%)

Query: 529 SLDSIQRADLDENSPRAFCVQDPIKVTLQNLKEEKIIEAPLFPKKPEKGNRKLHL 583
           S + I R   + ++ + + VQ      +   KE  +I AP++PK  + G  +LHL
Sbjct: 339 SGEPITRVWGNSHNRKGYGVQSGSTTAIIEEKEVMLITAPVYPKDNKGGKGRLHL 393



>EAY10836.1 on XP_804625   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1042

 Score = 29.6 bits (65), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)

Query: 525 INIDSL-DSIQRADLDENSPRAFCVQDPIKVTLQNLKEEKIIEAPLFPKKPEKGNRKLHL 583
           +N ++L + I R   + ++ + + VQ      +   KE  +I AP++ K  E G  +LHL
Sbjct: 340 VNWNTLGEPINRVWGNSHNRKGYGVQSGSTTAIIEGKEVMLITAPVYAKDNEGGKGRLHL 399



>EAY10836.1 on XP_803953   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1027

 Score = 28.9 bits (63), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)

Query: 525 INIDSL-DSIQRADLDENSPRAFCVQDPIKVTLQNLKEEKIIEAPLFPKKPEKGNRKLHL 583
           +N ++L + I R   + ++ + + VQ      +   KE  +I AP++ K  E G  +LHL
Sbjct: 339 VNWNTLGEPINRVWGNSHNRKGYGVQSGSTTAIIEDKEVMLITAPVYAKDNEGGKGRLHL 398



>EAY10836.1 on XP_804892   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1046

 Score = 28.5 bits (62), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 15/51 (29%), Positives = 25/51 (49%)

Query: 533 IQRADLDENSPRAFCVQDPIKVTLQNLKEEKIIEAPLFPKKPEKGNRKLHL 583
           I R   + ++ + + VQ      +   KE  +I AP++ K  E G  +LHL
Sbjct: 348 INRVWGNSHNRKGYGVQSGFTNAIIEEKEVMLITAPVYAKDNEGGKGRLHL 398



>EAY10836.1 on XP_805883   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1038

 Score = 28.1 bits (61), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)

Query: 529 SLDSIQRADLDENSPRAFCVQDPIKVTLQNLKEEKIIEAPLFPKKPEK-GNRKLHL 583
           S + I R   + ++ + + VQ      +   KE  +I AP++PK+  K G  +LHL
Sbjct: 338 SGEPINRVWGNSHNRKGYGVQSGSTTAIIEGKEVMLITAPVYPKEDNKCGKGRLHL 393



>EAY10836.1 on XP_808201   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1044

 Score = 27.7 bits (60), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 533 IQRADLDENSPRAFCVQDPIKVTLQNLKEEKIIEAPLFPKKPEKGNR-KLHL 583
           I R   + ++ +   VQ      +   KE  +I AP++PK+  KG + +LHL
Sbjct: 348 ITRVWGNSHNRKGHGVQSGSTTAIIEGKEVMLITAPVYPKEDNKGGKGRLHL 399



>EAY10836.1 on XP_821102   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 929

 Score = 26.6 bits (57), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 9/50 (18%)

Query: 552 IKVTLQNLKEEKIIEAPLFPKKPEKGNRKLHLSKT----IY----IERED 593
           IKVT+++ K+  ++  P++PK+  K   +LHL  T    +Y    I RED
Sbjct: 317 IKVTIED-KDVMLVTLPVYPKEDNKQKGRLHLWVTDNSRVYDVGPISRED 365



>EAY10836.1 on XP_805733   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 823

 Score = 26.6 bits (57), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 10/72 (13%)

Query: 531 DSIQRADLDENSPRAFCVQDP-IKVTLQNLKEEKIIEAPLFPKKPEKGNRKLHLSKT--- 586
           +++ R   D ++ +   VQ+  IKVT+++ K   ++  P++PK   K   +LHL  T   
Sbjct: 296 ETLPRVWGDSHNRKGHGVQNAFIKVTIED-KGVMLVTLPVYPKDDNKQKGRLHLWVTDKS 354

Query: 587 -IY----IERED 593
            +Y    I RED
Sbjct: 355 RVYDVGPISRED 366



>EAY10836.1 on XP_810574   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 954

 Score = 26.6 bits (57), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 18/127 (14%)

Query: 16  KEVPK--LLKNKKIMERIMTAIEAAHIPAEGCPSSMG---TLIIKLCGGDVPNSNAIA-- 68
           K VP   L      +E + T++     P    P++ G   T    L G  VP+  A +  
Sbjct: 731 KPVPAKALTTTSPPVEPLTTSVTTEMQPTVPSPATAGPQPTEQATLNGSSVPSGGAPSTP 790

Query: 69  -ELIGASKITTPEQLAAATEFVQANTTFTPAQLEAAAGVGVTVTEEDVKAAVAKTIDDSI 127
            EL  A+  +TPE+L AAT         TP +L AA       T + + +A +    +++
Sbjct: 791 EELNAAT--STPEELNAATS--------TPEELNAATSSAREGTADQLASATSSDGHEAV 840

Query: 128 DFIAEKG 134
             +   G
Sbjct: 841 ASVTSSG 847



>EAY10836.1 on XP_804223   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 746

 Score = 26.2 bits (56), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 548 VQDPIKVTLQNLKEEKIIEAPLFPKKPEKGNR-KLHL 583
           VQ      +   K+  +I AP++PK+  KG + +LHL
Sbjct: 58  VQSGFTTAIIEEKKVMLITAPVYPKEENKGGKGRLHL 94



>EAY10836.1 on XP_802557   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 608

 Score = 25.8 bits (55), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 1/32 (3%)

Query: 552 IKVTLQNLKEEKIIEAPLFPKKPEKGNRKLHL 583
           IKVT+++ K+  ++  P++PK   K   +LHL
Sbjct: 213 IKVTIED-KDVMLVTLPVYPKDDNKQKGRLHL 243




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10838.1 ankyrin repeat protein, putative [Trichomonas
vaginalis G3]
         (234 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_843645  VSG  (Establishment)  [Trypanosoma brucei]                  25   5.7  

>EAY10838.1 on XP_843645  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 569

 Score = 24.6 bits (52), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 9/49 (18%)

Query: 65  KALFIFYE--LDKNSVIPWCGAFSQAIDIIH---DENLD----FNRVSS 104
           K L I YE  L+K   +PW  A     D +H   D N D    ++RV +
Sbjct: 371 KGLCISYENFLNKGKQVPWAAAVLDVADELHNLEDANADIITLYSRVCA 419




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10845.1 hypothetical protein TVAG_258470 [Trichomonas
vaginalis G3]
         (163 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_821148   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.048
AAL15422  MSA-2a2  (Invasion)  [Babesia bovis]                         28   0.27 
XP_812771   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   0.53 
XP_819341   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   0.58 
XP_818193   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   1.3  
XP_821133   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   1.4  
XP_815498   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   1.7  
XP_819344   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   2.4  
XP_814620   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   2.4  
XP_808824   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   2.9  
XP_812988   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   3.1  
AAL15421  MSA-2a1  (Invasion)  [Babesia bovis]                         25   3.3  
ABA06450  MSA-2a1  (Invasion)  [Babesia bovis]                         25   3.3  
XP_001348176  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   6.0  
XP_822022   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   6.1  
XP_817993   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   8.0  
XP_817996   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   8.2  
XP_816556   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   9.6  

>EAY10845.1 on XP_821148   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 924

 Score = 30.4 bits (67), Expect = 0.048,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 25/53 (47%)

Query: 99  SNQRLETLISTDFKFDGSEPQPKKIEEILDVYSKENPLYYITWDKVDELKSKF 151
           +N++ E +   + K DG +P P  +  +L    +       TW KVDE  SK 
Sbjct: 426 TNEKEELIALYEKKKDGGKPSPGMVSVLLTAQLQRVKEVLATWKKVDETVSKL 478



>EAY10845.1 on AAL15422  MSA-2a2  (Invasion)  [Babesia bovis]
          Length = 292

 Score = 27.7 bits (60), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 18/74 (24%), Positives = 40/74 (54%), Gaps = 9/74 (12%)

Query: 39  SSNFSDSISQIADLIKT--EKTPIKMALYLIDIFSNMR-------VKNIAIYAQIYKKLI 89
           S N  D+I+   +++ +  EK P K +L+   +F N++        K++ +   + KK++
Sbjct: 67  SDNSLDAINAFVEILDSFKEKVPFKTSLFDNSVFDNLKYQDTDEIFKSLLLRVPLIKKML 126

Query: 90  TDFSISVTPSNQRL 103
           ++F+  +  + QRL
Sbjct: 127 SEFNAFLNDNPQRL 140



>EAY10845.1 on XP_812771   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 924

 Score = 26.9 bits (58), Expect = 0.53,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 112 KFDGSEPQPKKIEEILDVYSKENPLYYITWDKVDELKSKF-PNI 154
           K DG +P P  +  +L    +       TW KVDE  SK  P+I
Sbjct: 443 KGDGKKPSPGMVSVLLTAQLQRVKDVLATWKKVDERVSKLCPSI 486



>EAY10845.1 on XP_819341   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 888

 Score = 26.9 bits (58), Expect = 0.58,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 24/56 (42%)

Query: 104 ETLISTDFKFDGSEPQPKKIEEILDVYSKENPLYYITWDKVDELKSKFPNIDVIKN 159
           E LI+   K +G E  P  +  +L    K       TW KVDE  SK      ++N
Sbjct: 453 EELIALYEKKNGEESSPGMVSVLLTEQLKRVKDVLATWKKVDETVSKLCPSSAVEN 508



>EAY10845.1 on XP_818193   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 838

 Score = 25.8 bits (55), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 2/54 (3%)

Query: 100 NQRLETLIS--TDFKFDGSEPQPKKIEEILDVYSKENPLYYITWDKVDELKSKF 151
           N++ E LI+     K DG EP    +  +L    K       TW +VDE  SK 
Sbjct: 494 NKKEEELIALYEKKKGDGKEPSYGMVSVLLTAQLKRVKKVLTTWKEVDERVSKL 547



>EAY10845.1 on XP_821133   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 896

 Score = 25.8 bits (55), Expect = 1.4,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 21/48 (43%)

Query: 104 ETLISTDFKFDGSEPQPKKIEEILDVYSKENPLYYITWDKVDELKSKF 151
           E LI+   K  G +P P  +  +L    +       TW KVDE  SK 
Sbjct: 443 EKLIALYEKNSGGKPSPGMVSVLLTEQLQRVKDVLATWKKVDETVSKL 490



>EAY10845.1 on XP_815498   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 822

 Score = 25.4 bits (54), Expect = 1.7,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 24/59 (40%)

Query: 93  SISVTPSNQRLETLISTDFKFDGSEPQPKKIEEILDVYSKENPLYYITWDKVDELKSKF 151
           S+     N + E LI+   K  G +P P  +   L    K       TW +VDE  S+ 
Sbjct: 426 SLLYKSGNNKKEELIALYEKKKGEKPSPGMVSVRLTAQLKRVKEVVATWKEVDERVSQL 484



>EAY10845.1 on XP_819344   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 861

 Score = 25.0 bits (53), Expect = 2.4,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 15/35 (42%)

Query: 112 KFDGSEPQPKKIEEILDVYSKENPLYYITWDKVDE 146
           K D  +P P  +  IL    +       TW KVDE
Sbjct: 440 KVDAEKPSPGMVSVILSAQLQRVKDVLATWKKVDE 474



>EAY10845.1 on XP_814620   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 931

 Score = 25.0 bits (53), Expect = 2.4,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%)

Query: 92  FSISVTPSNQRLETLIST-DFKFDGSEPQPKKIEEILDVYSKENPLYYITWDKVDELKSK 150
           +  + + +N++ E LI+  + K +  +P P  +  +L    +       TW KVD+L SK
Sbjct: 427 YKSAASGTNKKEEELIALYEKKKEDEKPSPGMVSVLLTEQLERVKEVLATWKKVDDLVSK 486

Query: 151 F 151
            
Sbjct: 487 L 487



>EAY10845.1 on XP_808824   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 777

 Score = 25.0 bits (53), Expect = 2.9,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 17/40 (42%)

Query: 112 KFDGSEPQPKKIEEILDVYSKENPLYYITWDKVDELKSKF 151
           K DG EP    +  +L    K       TW +VDE  SK 
Sbjct: 447 KGDGKEPSYGMVSVLLTAQLKRVKKVLTTWKEVDERVSKL 486



>EAY10845.1 on XP_812988   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 889

 Score = 24.6 bits (52), Expect = 3.1,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 23/53 (43%)

Query: 99  SNQRLETLISTDFKFDGSEPQPKKIEEILDVYSKENPLYYITWDKVDELKSKF 151
           S  + E LI+   K DG +P       +L    +       TW KVD+L SK 
Sbjct: 427 SETKKEELIALYEKKDGEKPSHSLWSVVLTEQLQRVKEVLATWKKVDDLVSKL 479



>EAY10845.1 on AAL15421  MSA-2a1  (Invasion)  [Babesia bovis]
          Length = 316

 Score = 24.6 bits (52), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 15/64 (23%), Positives = 35/64 (54%), Gaps = 9/64 (14%)

Query: 39  SSNFSDSISQIADLIKT--EKTPIKMALYLIDIFSNMR-------VKNIAIYAQIYKKLI 89
           S N  D+I+   +++ +  EK P K +L+   +F N++        K++ +   + KK++
Sbjct: 67  SDNSLDAINAFVEILDSFKEKVPFKTSLFDNSVFDNLKYQDTDEIFKSLLLRVPLIKKML 126

Query: 90  TDFS 93
           ++F+
Sbjct: 127 SEFN 130



>EAY10845.1 on ABA06450  MSA-2a1  (Invasion)  [Babesia bovis]
          Length = 316

 Score = 24.6 bits (52), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 15/64 (23%), Positives = 35/64 (54%), Gaps = 9/64 (14%)

Query: 39  SSNFSDSISQIADLIKT--EKTPIKMALYLIDIFSNMR-------VKNIAIYAQIYKKLI 89
           S N  D+I+   +++ +  EK P K +L+   +F N++        K++ +   + KK++
Sbjct: 67  SDNSLDAINAFVEILDSFKEKVPFKTSLFDNSVFDNLKYQDTDEIFKSLLLRVPLIKKML 126

Query: 90  TDFS 93
           ++F+
Sbjct: 127 SEFN 130



>EAY10845.1 on XP_001348176  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3119

 Score = 23.9 bits (50), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 32/149 (21%), Positives = 60/149 (40%), Gaps = 13/149 (8%)

Query: 2    TTSGQQPIIKSINFSELKPLEVFK---YPY-QASSILWGVNSSNFSDSISQIADLIKTEK 57
            T S  + I   I  +  K +E +K   YPY +  S  W  N      +++   + IK +K
Sbjct: 1451 TQSNLETIFGKIKDNLGKSVENYKDDSYPYIKLRSDWWSANRDKVWKAMTCPQNGIKCDK 1510

Query: 58   TPIKMALYLIDIFSNMRVKNIAIYAQIYKKLITDFSISVTPSNQRLETLISTDFKFDGSE 117
             P       +D +   R++ +  +A+ Y K   +   ++       +   +   K +  +
Sbjct: 1511 DPP------LDDYIPQRLRWMTEWAEWYCKYQAEAYKTLQKG---CDECKNKSKKCEKDK 1561

Query: 118  PQPKKIEEILDVYSKENPLYYITWDKVDE 146
            PQ K   +  D Y K+   +   W K+ E
Sbjct: 1562 PQCKNCTKACDEYWKKIEKWENQWTKIKE 1590



>EAY10845.1 on XP_822022   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 791

 Score = 23.9 bits (50), Expect = 6.1,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 33/87 (37%), Gaps = 6/87 (6%)

Query: 65  YLIDIFSNMRVKNIAIYAQIYKKLITDFSISVTPSNQRLETLISTDFKFDGSEPQPKKIE 124
           +++DI       ++A  A +YK      S+       + E LI+   K  G    P  + 
Sbjct: 406 HIVDIGPVSEEDDVAASALLYK------SVKSGDQGNKEEKLIALYEKKGGGRSSPGMVS 459

Query: 125 EILDVYSKENPLYYITWDKVDELKSKF 151
             L    K       TW KVD+  SK 
Sbjct: 460 VRLAAQLKRVKEVLATWKKVDDRVSKL 486



>EAY10845.1 on XP_817993   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 830

 Score = 23.5 bits (49), Expect = 8.0,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 16/40 (40%)

Query: 112 KFDGSEPQPKKIEEILDVYSKENPLYYITWDKVDELKSKF 151
           K DG  P P  +   L    K       TW +VDE  S+ 
Sbjct: 453 KADGENPSPGMVSVRLTAQLKRVKEVVATWKEVDERVSQL 492



>EAY10845.1 on XP_817996   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 792

 Score = 23.5 bits (49), Expect = 8.2,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 16/40 (40%)

Query: 112 KFDGSEPQPKKIEEILDVYSKENPLYYITWDKVDELKSKF 151
           K DG  P P  +   L    K       TW +VDE  S+ 
Sbjct: 415 KADGENPSPGMVSVRLTAQLKRVKEVVATWKEVDERVSQL 454



>EAY10845.1 on XP_816556   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 807

 Score = 23.1 bits (48), Expect = 9.6,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 1/61 (1%)

Query: 92  FSISVTPSNQRLETLIST-DFKFDGSEPQPKKIEEILDVYSKENPLYYITWDKVDELKSK 150
           +S ++   N+  E LI+  + K DG       +  +L    K       TW KVDE  SK
Sbjct: 438 YSGAINTDNENKEGLIALYEKKDDGFRQSSSMVSVLLTEQLKRVKEVLATWKKVDERVSK 497

Query: 151 F 151
            
Sbjct: 498 L 498




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10849.1 Kinesin motor domain containing protein
[Trichomonas vaginalis G3]
         (647 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609540  variant erythrocyte surface antigen-1, alpha subun...    28   1.8  
XP_001349740  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   3.0  
XP_818708   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   4.0  
CAD98301  Subtilase  (Others)  [Cryptosporidium parvum]                26   4.9  
XP_802633   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   6.1  
XP_001349513  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   6.8  
XP_001351517  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   9.6  

>EAY10849.1 on XP_001609540  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1349

 Score = 28.1 bits (61), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 6/93 (6%)

Query: 31  LFQNQNKPMNQSQNIPLQNTPSQSKVKFTSAPKLNASQKVPKTPSPIR-TSRTTPILKAS 89
           +F+   K +N+++   +      S   FT   K N ++  P+TP  IR        L  S
Sbjct: 429 VFKENGKDINKNKLGAIFKLYILSCAYFTGLQKKNTTESTPRTPKTIREILYWLSALPYS 488

Query: 90  PAVPQ-QEHDPETDVKVFLRVRPILDQEAQADF 121
           PA P+  +H  E    V  +V P +  + Q  F
Sbjct: 489 PAYPEILQHSKE----VMKKVAPDVGDKKQLSF 517



>EAY10849.1 on XP_001349740  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3346

 Score = 27.7 bits (60), Expect = 3.0,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 51   PSQSKVKFTSAPKLNASQKVPK-TPSPIRTSRTTPILKASPAVPQQEHDPETD 102
            PS S  + +  P+ N+    PK   +P      TPILK     P +   P+ D
Sbjct: 2790 PSGSPTEESGEPRENSDSSDPKPDQNPEANPEQTPILKPEEEAPPKSKPPDGD 2842



>EAY10849.1 on XP_818708   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 929

 Score = 26.9 bits (58), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)

Query: 450 SDEDSEDDAVRALSFNEEEADQTQEQEPDEEVVNLIEAEAKIRQQVYT 497
           S ED ED A  AL +   E+  T ++E  EE++ L E +   +  VYT
Sbjct: 412 SREDDEDVAASALLYKSSES--TTDEEKKEELIALYEKKKDEKVDVYT 457



>EAY10849.1 on CAD98301  Subtilase  (Others)  [Cryptosporidium parvum]
          Length = 255

 Score = 26.2 bits (56), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 340 SERVKSGEGYSKIVNEARAINKSMLTLGKCIRGIRLAKNGQRNVQIP 386
           SE+V  G+G SK++     I      L K ++ +++A    +N Q P
Sbjct: 115 SEKVSRGQGRSKVIPGRLIIKYKEKVLSKAVKELKVAGIMSKNGQYP 161



>EAY10849.1 on XP_802633   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 406

 Score = 26.2 bits (56), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 6/66 (9%)

Query: 240 DLLGNNKNPLRISKDGFGYTVVKNATEIELKSFDDLKKILDTI--DKNKSVGTTSYNSNS 297
           DLLG  +NP  +  D   + +V N T      +D  KKI   +  D    VG  + + +S
Sbjct: 176 DLLGVLRNPTSVGMDNKAFLLVGNCT----MKYDATKKIWQKVGWDIRMLVGEATQSISS 231

Query: 298 SRSHCV 303
            R   +
Sbjct: 232 GRGEWI 237



>EAY10849.1 on XP_001349513  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2858

 Score = 26.2 bits (56), Expect = 6.8,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 9/70 (12%)

Query: 344  KSGEGYSKIVNEARAINKSMLTLGKCIRGIRL--AKNGQRNVQIPFRESKITELFKDFFD 401
            K+ EG+       RAI  S   +   I+G  L  A +G++N Q      K+ ++F+   D
Sbjct: 945  KTSEGFKDEATVCRAIKYSFADIADIIKGTDLWKANSGKKNTQ-----DKLVKIFQKIKD 999

Query: 402  --PVSQKKTY 409
              PV+ K  Y
Sbjct: 1000 NLPVNIKGKY 1009



>EAY10849.1 on XP_001351517  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2193

 Score = 25.8 bits (55), Expect = 9.6,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 7/54 (12%)

Query: 435  EAIHCDIKSKNDDEDSDEDSEDDAVRALSFNEEEADQTQEQEPDEEVVNLIEAE 488
            +AI C IK+        E   DD  R  + +++E ++T  Q PDE   N IE E
Sbjct: 1602 DAIDCMIKNL-------EKKIDDCNRNHNPSDKECNETLAQTPDETFDNDIEIE 1648




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10859.1 hypothetical protein TVAG_012250 [Trichomonas
vaginalis G3]
         (88 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001608665  variant erythrocyte surface antigen-1, alpha subun...    24   1.7  
XP_001611147  variant erythrocyte surface antigen-1, alpha subun...    23   2.4  

>EAY10859.1 on XP_001608665  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1326

 Score = 23.9 bits (50), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query: 33  KAKSQKFVELTNTMKIFQKEEIEKVRTELLRDVENLES 70
           K + +K       MK+  + EI +  T+LL D+E+L S
Sbjct: 826 KGEIEKQKTAKENMKVVLRLEIPQEYTKLLNDIEDLIS 863



>EAY10859.1 on XP_001611147  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1304

 Score = 23.5 bits (49), Expect = 2.4,   Method: Composition-based stats.
 Identities = 11/22 (50%), Positives = 15/22 (68%)

Query: 51  KEEIEKVRTELLRDVENLESNL 72
           K E+EK RTEL   V+ ++S L
Sbjct: 698 KTELEKARTELDTAVKQVKSGL 719




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10865.1 surface antigen BspA-like [Trichomonas
vaginalis G3]
         (202 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAW78166  TRAP  (Invasion)  [Plasmodium falciparum]                    25   3.7  
AAW78135  TRAP  (Invasion)  [Plasmodium falciparum]                    25   3.8  
AAW78141  TRAP  (Invasion)  [Plasmodium falciparum]                    25   4.0  
AAW78159  TRAP  (Invasion)  [Plasmodium falciparum]                    25   4.1  
AAW78161  TRAP  (Invasion)  [Plasmodium falciparum]                    25   4.2  
AAW78132  TRAP  (Invasion)  [Plasmodium falciparum]                    25   4.2  
AAW78165  TRAP  (Invasion)  [Plasmodium falciparum]                    25   4.5  
AAW78177  TRAP  (Invasion)  [Plasmodium falciparum]                    25   4.9  
AAW78136  TRAP  (Invasion)  [Plasmodium falciparum]                    25   4.9  
AAW78162  TRAP  (Invasion)  [Plasmodium falciparum]                    25   5.3  
AAW78160  TRAP  (Invasion)  [Plasmodium falciparum]                    24   5.9  

>EAY10865.1 on AAW78166  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 545

 Score = 25.0 bits (53), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 23/106 (21%), Positives = 46/106 (43%), Gaps = 13/106 (12%)

Query: 75  IYEYCFTDSKISSIKLHNGITTIQQYAFYACKSLSNITIPEGVKSIGYNAL--------- 125
           +Y   F+++    I+LH+  +  ++ A    KSL N  +P G  ++    L         
Sbjct: 88  LYANVFSNNAREIIRLHSDASKNKEKALIIIKSLLNTNLPFGRTNLSDALLQVRKHLNDR 147

Query: 126 ---EYCGSLTTVFINGNISSIESYLFSECKSISSISIPESVTKIGR 168
              E    L  +  +G  +SI+  L  E + ++ + +  +V  IG+
Sbjct: 148 INRENANQLVVILTDGIPNSIQDSL-KESRKLNDLGVKIAVFGIGQ 192



>EAY10865.1 on AAW78135  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 545

 Score = 25.0 bits (53), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 23/106 (21%), Positives = 45/106 (42%), Gaps = 13/106 (12%)

Query: 75  IYEYCFTDSKISSIKLHNGITTIQQYAFYACKSLSNITIPEGVKSIGYNAL--------- 125
           +Y   F+++    I+LH+  +  ++ A    KSL N  +P G  ++    L         
Sbjct: 88  LYANVFSNNAREIIRLHSDASKNKEKALIIIKSLLNTNLPFGRTNLSDALLQVRKHLNDR 147

Query: 126 ---EYCGSLTTVFINGNISSIESYLFSECKSISSISIPESVTKIGR 168
              E    L  +  +G   SI+  L  E + ++ + +  +V  IG+
Sbjct: 148 INRENANQLVVILTDGIPDSIQDSL-KESRKLNDLGVKIAVFGIGQ 192



>EAY10865.1 on AAW78141  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 545

 Score = 25.0 bits (53), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 23/106 (21%), Positives = 45/106 (42%), Gaps = 13/106 (12%)

Query: 75  IYEYCFTDSKISSIKLHNGITTIQQYAFYACKSLSNITIPEGVKSIGYNAL--------- 125
           +Y   F+++    I+LH+  +  ++ A    KSL N  +P G  ++    L         
Sbjct: 88  LYANVFSNNAREIIRLHSDASKNKEKALIIIKSLLNTNLPFGRTNLSDALLQVRKHLNDR 147

Query: 126 ---EYCGSLTTVFINGNISSIESYLFSECKSISSISIPESVTKIGR 168
              E    L  +  +G   SI+  L  E + ++ + +  +V  IG+
Sbjct: 148 INRENANQLVVILTDGIPDSIQDSL-KESRKLNDLGVKIAVFGIGQ 192



>EAY10865.1 on AAW78159  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 25.0 bits (53), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 23/106 (21%), Positives = 46/106 (43%), Gaps = 13/106 (12%)

Query: 75  IYEYCFTDSKISSIKLHNGITTIQQYAFYACKSLSNITIPEGVKSIGYNAL--------- 125
           +Y   F+++    I+LH+  +  ++ A    KSL N  +P G  ++    L         
Sbjct: 88  LYANVFSNNAREIIRLHSDASKNKEKALIIIKSLLNTNLPFGRTNLSDALLQVRKHLNDR 147

Query: 126 ---EYCGSLTTVFINGNISSIESYLFSECKSISSISIPESVTKIGR 168
              E    L  +  +G  +SI+  L  E + ++ + +  +V  IG+
Sbjct: 148 INRENANQLVVILTDGIPNSIQDSL-KESRKLNDLGVKIAVFGIGQ 192



>EAY10865.1 on AAW78161  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 554

 Score = 24.6 bits (52), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 23/106 (21%), Positives = 45/106 (42%), Gaps = 13/106 (12%)

Query: 75  IYEYCFTDSKISSIKLHNGITTIQQYAFYACKSLSNITIPEGVKSIGYNAL--------- 125
           +Y   F+++    I+LH+  +  ++ A    KSL N  +P G  ++    L         
Sbjct: 88  LYANVFSNNAREIIRLHSDASKNKEKALIIIKSLLNTNLPFGRTNLSDALLQVRKHLNDR 147

Query: 126 ---EYCGSLTTVFINGNISSIESYLFSECKSISSISIPESVTKIGR 168
              E    L  +  +G   SI+  L  E + ++ + +  +V  IG+
Sbjct: 148 INRENANQLVVILTDGIPDSIQDSL-KESRKLNDLGVKIAVFGIGQ 192



>EAY10865.1 on AAW78132  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 24.6 bits (52), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 23/106 (21%), Positives = 45/106 (42%), Gaps = 13/106 (12%)

Query: 75  IYEYCFTDSKISSIKLHNGITTIQQYAFYACKSLSNITIPEGVKSIGYNAL--------- 125
           +Y   F+++    I+LH+  +  ++ A    KSL N  +P G  ++    L         
Sbjct: 88  LYANVFSNNAREIIRLHSDASKNKEKALIIIKSLLNTNLPFGRTNLSDALLQVRKHLNDR 147

Query: 126 ---EYCGSLTTVFINGNISSIESYLFSECKSISSISIPESVTKIGR 168
              E    L  +  +G   SI+  L  E + ++ + +  +V  IG+
Sbjct: 148 INRENANQLVVILTDGIPDSIQDSL-KESRKLNDLGVKIAVFGIGQ 192



>EAY10865.1 on AAW78165  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 24.6 bits (52), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 23/106 (21%), Positives = 45/106 (42%), Gaps = 13/106 (12%)

Query: 75  IYEYCFTDSKISSIKLHNGITTIQQYAFYACKSLSNITIPEGVKSIGYNAL--------- 125
           +Y   F+++    I+LH+  +  ++ A    KSL N  +P G  ++    L         
Sbjct: 88  LYANVFSNNAREIIRLHSDASKNKEKALIIIKSLLNTNLPFGRTNLSDALLQVRKHLNDR 147

Query: 126 ---EYCGSLTTVFINGNISSIESYLFSECKSISSISIPESVTKIGR 168
              E    L  +  +G   SI+  L  E + ++ + +  +V  IG+
Sbjct: 148 INRENANQLVVILTDGIPDSIQDSL-KESRKLNDLGVKIAVFGIGQ 192



>EAY10865.1 on AAW78177  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 539

 Score = 24.6 bits (52), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 23/106 (21%), Positives = 46/106 (43%), Gaps = 13/106 (12%)

Query: 75  IYEYCFTDSKISSIKLHNGITTIQQYAFYACKSLSNITIPEGVKSIGYNAL--------- 125
           +Y   F+++    I+LH+  +  ++ A    KSL N  +P G  ++    L         
Sbjct: 88  LYASVFSNNAREIIRLHSDASKNKEKALIIIKSLLNTNLPFGRTNLSDALLQVRKHLNDR 147

Query: 126 ---EYCGSLTTVFINGNISSIESYLFSECKSISSISIPESVTKIGR 168
              E    L  +  +G  +SI+  L  E + ++ + +  +V  IG+
Sbjct: 148 INRENANQLVVILTDGIPNSIQDSL-KESRKLNDLGVKIAVFGIGQ 192



>EAY10865.1 on AAW78136  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 542

 Score = 24.6 bits (52), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 26/114 (22%), Positives = 48/114 (42%), Gaps = 16/114 (14%)

Query: 75  IYEYCFTDSKISSIKLHNGITTIQQYAFYACKSLSNITIPEGVKSIGYNAL--------- 125
           +Y   F+++    I+LH+  +  ++ A    KSL N  +P G  ++    L         
Sbjct: 88  LYANVFSNNAREIIRLHSDASKNKEKALIIIKSLLNTNLPFGRTNLSDALLQVRKHLNDR 147

Query: 126 ---EYCGSLTTVFINGNISSIESYLFSECKSISSISIPESVTKIGRN---AFFR 173
              E    L  +  +G   SI+  L  E + ++ + +  +V  IG+    AF R
Sbjct: 148 INRENANQLVVILTDGIPDSIQGSL-KESRKLNDLGVKIAVFGIGQGINVAFNR 200



>EAY10865.1 on AAW78162  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 542

 Score = 24.6 bits (52), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 26/114 (22%), Positives = 48/114 (42%), Gaps = 16/114 (14%)

Query: 75  IYEYCFTDSKISSIKLHNGITTIQQYAFYACKSLSNITIPEGVKSIGYNAL--------- 125
           +Y   F+++    I+LH+  +  ++ A    KSL N  +P G  ++    L         
Sbjct: 88  LYASVFSNNAREIIRLHSDASKNKEKALIIIKSLLNTNLPFGRTNLSDALLQVRKHLNDR 147

Query: 126 ---EYCGSLTTVFINGNISSIESYLFSECKSISSISIPESVTKIGRN---AFFR 173
              E    L  +  +G   SI+  L  E + ++ + +  +V  IG+    AF R
Sbjct: 148 INRENANQLVVILTDGIPDSIQGSL-KESRKLNDLGVKIAVFGIGQGINVAFNR 200



>EAY10865.1 on AAW78160  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 557

 Score = 24.3 bits (51), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 23/106 (21%), Positives = 45/106 (42%), Gaps = 13/106 (12%)

Query: 75  IYEYCFTDSKISSIKLHNGITTIQQYAFYACKSLSNITIPEGVKSIGYNAL--------- 125
           +Y   F+++    I+LH+  +  ++ A    KSL N  +P G  ++    L         
Sbjct: 88  LYANVFSNNAREIIRLHSDASKNKEKALIIIKSLLNTNLPFGRTNLSDALLQVRKHLNDR 147

Query: 126 ---EYCGSLTTVFINGNISSIESYLFSECKSISSISIPESVTKIGR 168
              E    L  +  +G   SI+  L  E + ++ + +  +V  IG+
Sbjct: 148 INRENANQLVVILTDGIPDSIQDSL-KESRKLNDLGVKIAVFGIGQ 192




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10867.1 hypothetical protein TVAG_012330 [Trichomonas
vaginalis G3]
         (156 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAX07975  Alpha-1 giardin  (Adhesin)  [Giardia duodenalis]             25   1.6  
XP_809283   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   1.8  
XP_821991   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   2.0  
XP_807740   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   2.7  
XP_822026   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   3.3  
XP_817716   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   5.2  
XP_810496   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   9.5  
XP_812811   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   9.6  

>EAY10867.1 on AAX07975  Alpha-1 giardin  (Adhesin)  [Giardia duodenalis]
          Length = 255

 Score = 25.4 bits (54), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 2/56 (3%)

Query: 13  QRLSRILDFTNVFFIIDHFDDI-DLDVKPVS-PFSTQNESKINVKQRSVKKETKMY 66
           QRL +  D  N  ++ID F  +   + +P++  F  QN   I     ++  +T  Y
Sbjct: 160 QRLDQAFDQKNTAYLIDFFGTVPSAEYRPIAEAFKAQNGKSIEQAIATIYTKTDYY 215



>EAY10867.1 on XP_809283   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 844

 Score = 25.4 bits (54), Expect = 1.8,   Method: Composition-based stats.
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query: 128 GSTIVLLSEYLSGCSAFISKWEEISEK 154
           G   VLL+E L      ++KW+E+ E+
Sbjct: 471 GMVSVLLTEQLQRVKEVLTKWKEVDER 497



>EAY10867.1 on XP_821991   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 882

 Score = 25.4 bits (54), Expect = 2.0,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%)

Query: 122 KLEMKDGSTIVLLSEYLSGCSAFISKWEEISEK 154
           K E   G   VLL+E L      ++ W+E+ E+
Sbjct: 444 KGESSSGMVSVLLTEQLKRVKEVVTTWKEVDER 476



>EAY10867.1 on XP_807740   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 681

 Score = 25.0 bits (53), Expect = 2.7,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 7/63 (11%)

Query: 88  ENFMSLFDTFNLRIQTEFVSVVGLVEHSSSLKEVKLEMKDGSTIVLLS-EYLSGCSAFIS 146
           EN +  F  +N  +    VS+ G+ +  S +  + ++M D   IVLL   Y SG      
Sbjct: 569 ENQLYHFANYNFTL-VATVSIHGVPQEGSPIPLMGVQMNDSGKIVLLGLSYNSG-----K 622

Query: 147 KWE 149
           KW+
Sbjct: 623 KWQ 625



>EAY10867.1 on XP_822026   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 888

 Score = 24.6 bits (52), Expect = 3.3,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%)

Query: 122 KLEMKDGSTIVLLSEYLSGCSAFISKWEEISEK 154
           K E   G   VLL+E L      ++ W+E+ E+
Sbjct: 440 KGESSSGMVSVLLTEQLKRVREVLTTWKEVDER 472



>EAY10867.1 on XP_817716   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 948

 Score = 23.9 bits (50), Expect = 5.2,   Method: Composition-based stats.
 Identities = 10/31 (32%), Positives = 16/31 (51%)

Query: 124 EMKDGSTIVLLSEYLSGCSAFISKWEEISEK 154
           E   G   VLL+E L      ++ W+E+ E+
Sbjct: 471 ESSSGMVSVLLTEQLERVKDVLATWKEVDER 501



>EAY10867.1 on XP_810496   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 943

 Score = 23.1 bits (48), Expect = 9.5,   Method: Composition-based stats.
 Identities = 9/27 (33%), Positives = 15/27 (55%)

Query: 128 GSTIVLLSEYLSGCSAFISKWEEISEK 154
           G   VLL+E L      ++ W+E+ E+
Sbjct: 457 GMVSVLLTEQLQRVKKVLATWKEVDER 483



>EAY10867.1 on XP_812811   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 814

 Score = 23.1 bits (48), Expect = 9.6,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 16/36 (44%)

Query: 119 KEVKLEMKDGSTIVLLSEYLSGCSAFISKWEEISEK 154
           K+       G   VLL+E L      ++ W E+ E+
Sbjct: 468 KDDGFRQSSGMVSVLLTEQLKRVKEVLTTWREVDER 503




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10877.1 Tubulin-tyrosine ligase family protein
[Trichomonas vaginalis G3]
         (514 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_803124   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           31   0.14 
XP_810932   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   4.3  
CAA05261  PfSUB1  (Proteases)  [Plasmodium falciparum]                 27   4.5  
XP_828487  VSG  (Establishment)  [Trypanosoma brucei]                  26   5.2  
XP_812068   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   6.3  

>EAY10877.1 on XP_803124   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 620

 Score = 31.2 bits (69), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 3/73 (4%)

Query: 334 LSTMSEEQ--INNMFNKKAAHPEILQDIVREGRSLNKYICVYPTNDNERMVEYKLAMNVV 391
           LST S++    +N+    A    +L D   +GR  ++Y+C+  T  N + V Y   +   
Sbjct: 299 LSTWSQKDAFFSNLSIPTAGLVAVLSDAAGDGRWNDEYLCLNATVTNAKKVRYGFQLTEP 358

Query: 392 -SKMSGSIDSRGN 403
            S++S S+++R N
Sbjct: 359 DSRVSWSVNTRVN 371



>EAY10877.1 on XP_810932   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 753

 Score = 26.6 bits (57), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 5/52 (9%)

Query: 355 ILQDIVREGRSLNKYICVYPTNDNERMVEYKLAMNVVSKMSG---SIDSRGN 403
           +L D   +GR  ++Y+C++ T  N   V+ K  + +    SG   S+++R N
Sbjct: 498 VLSDAASDGRWNDEYLCLHATVKN--AVKVKEGLQLTESNSGVLWSVNTRDN 547



>EAY10877.1 on CAA05261  PfSUB1  (Proteases)  [Plasmodium falciparum]
          Length = 689

 Score = 26.6 bits (57), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 14/39 (35%), Positives = 25/39 (64%)

Query: 419 PEQIKENVTESKKLSARESKGNVSARKSLNNISVQKKTE 457
           P   +E++ E   LS  ESKGN+S  K++N++ ++ K +
Sbjct: 151 PSFFQESLLEPDVLSFLESKGNLSNLKNINSMIIELKED 189



>EAY10877.1 on XP_828487  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 356

 Score = 26.2 bits (56), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 6/39 (15%)

Query: 404 IPFMDVTEQVKEEN------QPEQIKENVTESKKLSARE 436
           +PF +  E+   E       +PE+IKEN T+ K+L  +E
Sbjct: 138 VPFANALEEKINEALYGVPWRPEEIKENTTDRKQLCQQE 176



>EAY10877.1 on XP_812068   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 812

 Score = 26.2 bits (56), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 17/73 (23%), Positives = 39/73 (53%), Gaps = 3/73 (4%)

Query: 334 LSTMSEEQI--NNMFNKKAAHPEILQDIVREGRSLNKYICVYPTNDNERMVEYKLAMNVV 391
           LST S++ +  ++     A    +L D   +GR +++Y+C+  T  N + V+  + +   
Sbjct: 476 LSTWSQKDVFFSSFSIPTAGLVAVLSDAAGDGRWIDEYLCLNATVRNAKKVKDGVQLTEP 535

Query: 392 -SKMSGSIDSRGN 403
            S++   +++RG+
Sbjct: 536 DSRVMWRVNTRGD 548




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10878.1 hypothetical protein TVAG_012440 [Trichomonas
vaginalis G3]
         (243 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001348015  AMA-1  (Invasion)  [Plasmodium falciparum]               28   0.61 
XP_822017   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.8  
XP_817389   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   1.8  
XP_805783   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   3.6  
XP_810953   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   3.6  
XP_813641   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   3.7  
XP_805718   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   4.0  
XP_805203   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   4.6  
XP_806431   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   4.9  
XP_820140   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   4.9  
XP_811897   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   5.3  
XP_805336   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   5.5  
XP_820142   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   5.6  
XP_821669   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   6.0  
XP_804553   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   6.5  
XP_810563   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   7.5  
XP_820145   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   7.8  
XP_820663   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   7.9  
XP_810777   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   8.2  
XP_820147   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   9.3  
XP_802705   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   9.5  

>EAY10878.1 on XP_001348015  AMA-1  (Invasion)  [Plasmodium falciparum]
          Length = 622

 Score = 27.7 bits (60), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 8   LEVWGPHAGSRIVDEKGYGGYSYALVYIPKDQIIH-LYIGGM 48
           L +   HAG+ I D      Y Y  VY  KD+  H LYI   
Sbjct: 214 LTLCSRHAGNMIPDNDKNSNYKYPAVYDDKDKKCHILYIAAQ 255



>EAY10878.1 on XP_822017   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 990

 Score = 26.6 bits (57), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/34 (44%), Positives = 16/34 (47%)

Query: 16  GSRIVDEKGYGGYSYALVYIPKDQIIHLYIGGMG 49
           GS  VD K  G  S  L      +I H YIGG G
Sbjct: 750 GSAYVDGKSVGDESCVLKIADSKEISHFYIGGDG 783



>EAY10878.1 on XP_817389   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 792

 Score = 26.2 bits (56), Expect = 1.8,   Method: Composition-based stats.
 Identities = 14/35 (40%), Positives = 18/35 (51%)

Query: 16  GSRIVDEKGYGGYSYALVYIPKDQIIHLYIGGMGE 50
           GS  VD K  G     L     ++I H YIGG+G+
Sbjct: 607 GSAYVDGKRVGAAPCELENADSEEISHFYIGGVGD 641



>EAY10878.1 on XP_805783   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 408

 Score = 25.4 bits (54), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 15/36 (41%), Positives = 18/36 (50%)

Query: 14  HAGSRIVDEKGYGGYSYALVYIPKDQIIHLYIGGMG 49
           + GS  VD K  G  S+ L      +I H YIGG G
Sbjct: 266 NQGSAYVDGKRVGSASWNLDNTDSKEISHFYIGGDG 301



>EAY10878.1 on XP_810953   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 958

 Score = 25.4 bits (54), Expect = 3.6,   Method: Composition-based stats.
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)

Query: 16  GSRIVD-EKGYGGYSYALVYIPKDQIIHLYIGGMGE 50
           GS  VD ++  GG + AL      +I H YIGG GE
Sbjct: 672 GSAYVDGQRVGGGEACALENTDSKEISHFYIGGDGE 707



>EAY10878.1 on XP_813641   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 873

 Score = 25.4 bits (54), Expect = 3.7,   Method: Composition-based stats.
 Identities = 15/35 (42%), Positives = 18/35 (51%)

Query: 16  GSRIVDEKGYGGYSYALVYIPKDQIIHLYIGGMGE 50
           GS  VD +  G    AL     ++I H YIGG GE
Sbjct: 655 GSVYVDGQRVGNEECALRNDESNEISHFYIGGDGE 689



>EAY10878.1 on XP_805718   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 482

 Score = 25.0 bits (53), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 9/27 (33%), Positives = 17/27 (62%)

Query: 170 GSGFVYLTRHPSSIRDINEIFVIDGRT 196
           G G + + RHP++    N++F++ G T
Sbjct: 195 GEGILDVVRHPTTTMKGNKVFLLVGST 221



>EAY10878.1 on XP_805203   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 844

 Score = 25.0 bits (53), Expect = 4.6,   Method: Composition-based stats.
 Identities = 9/27 (33%), Positives = 17/27 (62%)

Query: 170 GSGFVYLTRHPSSIRDINEIFVIDGRT 196
           G G + + RHP++    N++F++ G T
Sbjct: 194 GKGILDVVRHPTTTMKGNKVFLLVGST 220



>EAY10878.1 on XP_806431   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 872

 Score = 25.0 bits (53), Expect = 4.9,   Method: Composition-based stats.
 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)

Query: 16  GSRIVDEKGYG-GYSYALVYIPKDQIIHLYIGGMGEYYFNDNRLTYKAFN 64
           G+  VD +  G G S AL      +I H YIGG GE    D  ++    N
Sbjct: 707 GTAYVDGQRVGVGASCALGGTESQEISHFYIGGDGENTAGDEDVSVTVTN 756



>EAY10878.1 on XP_820140   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 875

 Score = 25.0 bits (53), Expect = 4.9,   Method: Composition-based stats.
 Identities = 15/35 (42%), Positives = 18/35 (51%)

Query: 16  GSRIVDEKGYGGYSYALVYIPKDQIIHLYIGGMGE 50
           GS  VD +  G    AL     ++I H YIGG GE
Sbjct: 657 GSVYVDGQRVGNEECALGNGESNEISHFYIGGDGE 691



>EAY10878.1 on XP_811897   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 879

 Score = 25.0 bits (53), Expect = 5.3,   Method: Composition-based stats.
 Identities = 15/35 (42%), Positives = 18/35 (51%)

Query: 16  GSRIVDEKGYGGYSYALVYIPKDQIIHLYIGGMGE 50
           GS  VD +  G    AL     ++I H YIGG GE
Sbjct: 658 GSVYVDGQRVGNEECALGNGASNEISHFYIGGDGE 692



>EAY10878.1 on XP_805336   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 931

 Score = 25.0 bits (53), Expect = 5.5,   Method: Composition-based stats.
 Identities = 17/49 (34%), Positives = 22/49 (44%)

Query: 16  GSRIVDEKGYGGYSYALVYIPKDQIIHLYIGGMGEYYFNDNRLTYKAFN 64
           GS  VD +  G    AL      +I H YIGG GE   N+  ++    N
Sbjct: 661 GSVYVDGQRVGNEECALGNGESKEISHFYIGGDGENAANNKDVSVTVTN 709



>EAY10878.1 on XP_820142   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 861

 Score = 25.0 bits (53), Expect = 5.6,   Method: Composition-based stats.
 Identities = 15/35 (42%), Positives = 18/35 (51%)

Query: 16  GSRIVDEKGYGGYSYALVYIPKDQIIHLYIGGMGE 50
           GS  VD +  G    AL     ++I H YIGG GE
Sbjct: 644 GSVYVDGQRVGNEECALRNGESNEISHFYIGGDGE 678



>EAY10878.1 on XP_821669   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 879

 Score = 24.6 bits (52), Expect = 6.0,   Method: Composition-based stats.
 Identities = 14/34 (41%), Positives = 16/34 (47%)

Query: 16  GSRIVDEKGYGGYSYALVYIPKDQIIHLYIGGMG 49
           GS  VD K  G  S  L      +I H +IGG G
Sbjct: 638 GSAYVDGKSVGDESCVLKIADSKEISHFFIGGDG 671



>EAY10878.1 on XP_804553   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 827

 Score = 24.6 bits (52), Expect = 6.5,   Method: Composition-based stats.
 Identities = 9/27 (33%), Positives = 17/27 (62%)

Query: 170 GSGFVYLTRHPSSIRDINEIFVIDGRT 196
           G G + + RHP++    N++F++ G T
Sbjct: 194 GEGSLNVVRHPTTTMKGNKVFLLVGST 220



>EAY10878.1 on XP_810563   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 868

 Score = 24.3 bits (51), Expect = 7.5,   Method: Composition-based stats.
 Identities = 15/35 (42%), Positives = 18/35 (51%)

Query: 16  GSRIVDEKGYGGYSYALVYIPKDQIIHLYIGGMGE 50
           GS  VD +  G    AL     ++I H YIGG GE
Sbjct: 651 GSVYVDGQRVGNGECALGNGASNEISHFYIGGDGE 685



>EAY10878.1 on XP_820145   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 871

 Score = 24.3 bits (51), Expect = 7.8,   Method: Composition-based stats.
 Identities = 15/35 (42%), Positives = 18/35 (51%)

Query: 16  GSRIVDEKGYGGYSYALVYIPKDQIIHLYIGGMGE 50
           GS  VD +  G    AL     ++I H YIGG GE
Sbjct: 654 GSVYVDGQRVGNGECALGNGESNEISHFYIGGDGE 688



>EAY10878.1 on XP_820663   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 928

 Score = 24.3 bits (51), Expect = 7.9,   Method: Composition-based stats.
 Identities = 17/35 (48%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 16  GSRIVDEKGYGG-YSYALVYIPKDQIIHLYIGGMG 49
           GS  VD K  GG  S AL      +I H YIGG G
Sbjct: 658 GSAYVDGKRVGGDVSCALGNKDSKEISHFYIGGDG 692



>EAY10878.1 on XP_810777   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 846

 Score = 24.3 bits (51), Expect = 8.2,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 12/45 (26%)

Query: 164 GDAGKG------------GSGFVYLTRHPSSIRDINEIFVIDGRT 196
           G+ GKG            G G + + RHP++    N++F++ G T
Sbjct: 176 GEVGKGTWSAHTVLGKAEGEGSLDVVRHPTTTMKGNKVFLLVGST 220



>EAY10878.1 on XP_820147   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 878

 Score = 24.3 bits (51), Expect = 9.3,   Method: Composition-based stats.
 Identities = 15/35 (42%), Positives = 17/35 (48%)

Query: 16  GSRIVDEKGYGGYSYALVYIPKDQIIHLYIGGMGE 50
           GS  VD +  G    AL      +I H YIGG GE
Sbjct: 657 GSVYVDGQRVGNEECALGNGESKEISHFYIGGDGE 691



>EAY10878.1 on XP_802705   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 266

 Score = 23.9 bits (50), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 9/27 (33%), Positives = 16/27 (59%)

Query: 170 GSGFVYLTRHPSSIRDINEIFVIDGRT 196
           G G   + RHP++    N++F++ G T
Sbjct: 195 GEGSFDVVRHPTTTMKDNKVFLLAGST 221




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10879.1 viral A-type inclusion protein, putative
[Trichomonas vaginalis G3]
         (4057 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609618  variant erythrocyte surface antigen-1, alpha subun...    45   8e-05
XP_001609040  variant erythrocyte surface antigen-1, alpha subun...    45   9e-05
XP_001611206  variant erythrocyte surface antigen-1, alpha subun...    37   0.024
XP_001609533  variant erythrocyte surface antigen-1, alpha subun...    37   0.024
XP_001609667  variant erythrocyte surface antigen-1, alpha subun...    37   0.026
XP_001608668  variant erythrocyte surface antigen-1, alpha subun...    36   0.062
XP_803378  VSG  (Establishment)  [Trypanosoma brucei]                  35   0.077
XP_001608665  variant erythrocyte surface antigen-1, alpha subun...    35   0.094
XP_001609041  variant erythrocyte surface antigen-1, alpha subun...    35   0.13 
XP_001611365  variant erythrocyte surface antigen-1, alpha subun...    35   0.15 
XP_001608795  variant erythrocyte surface antigen-1, alpha subun...    35   0.15 
XP_001609666  variant erythrocyte surface antigen-1, alpha subun...    34   0.19 
XP_001611147  variant erythrocyte surface antigen-1, alpha subun...    33   0.35 
XP_001609315  variant erythrocyte surface antigen-1, alpha subun...    33   0.42 
XP_001610567  variant erythrocyte surface antigen-1, alpha subun...    33   0.51 
XP_001610721  variant erythrocyte surface antigen-1, alpha subun...    33   0.60 
XP_001610568  variant erythrocyte surface antigen-1, alpha subun...    32   0.82 
XP_001610196  variant erythrocyte surface antigen-1, alpha subun...    31   1.5  
XP_843643  VSG  (Establishment)  [Trypanosoma brucei]                  31   1.7  
AAY44835  MSA-1  (Invasion)  [Babesia bovis]                           30   1.7  
AAY44838  MSA-1  (Invasion)  [Babesia bovis]                           30   2.0  
XP_001609167  variant erythrocyte surface antigen-1, alpha subun...    31   2.2  
XP_804892   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   2.7  
XP_001349513  PfEMP1  (Establishment)  [Plasmodium falciparum]         30   5.5  
XP_001349434  PfEMP1  (Establishment)  [Plasmodium falciparum]         29   5.7  
XP_804625   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   8.4  
XP_001608670  variant erythrocyte surface antigen-1, alpha subun...    29   8.7  
XP_001609034  variant erythrocyte surface antigen-1, alpha subun...    29   9.1  
XP_001610713  variant erythrocyte surface antigen-1, alpha subun...    28   9.9  

>EAY10879.1 on XP_001609618  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1325

 Score = 45.4 bits (106), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 45/197 (22%), Positives = 93/197 (47%), Gaps = 25/197 (12%)

Query: 3114 LQKEIDEREEKIKSQNEKLSNCRKEVEKTKQEIEEMKAKLNS------QLTEEIQTIKGE 3167
            ++ +   R EK+K +   + N  K +EK    IE+ KA L +      QL    + ++G+
Sbjct: 646  MEHDRKSRVEKVKGELGGVINKLKALEKIGDGIEKAKALLVAIGEVVVQLGNAQEALEGK 705

Query: 3168 KEDLLEKIKS-INKERDELSQQIKSLKRENDDLQQKLKSVIEEREKLEKEVNDLTQQ--- 3223
             +D + K+K+ + + + EL    + L+++  D       V++  EKL+  ++ LT +   
Sbjct: 706  DKDAIGKVKTALGEAKTELDSAKQELEKDGLD-------VLDGEEKLKGALDKLTTKNGG 758

Query: 3224 ----IKSLKNEIEEQKEKSKKEIE----NFSEKLKSSNEEKQKLQNQNDDLQQKLESIKE 3275
                +K +   +E+   K  KE++      SE +    E  ++++ Q  ++ +K +S  +
Sbjct: 759  SSGILKEVDGALEKATNKDGKEVDPGKNKISEAINKVLEMLKEMEKQLKEVLEKEQSNMD 818

Query: 3276 ERENLKRENDLINKKLK 3292
            E  NL       +K +K
Sbjct: 819  ENTNLNGHEKGFHKAIK 835




 Score = 35.8 bits (81), Expect = 0.059,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 69/155 (44%), Gaps = 12/155 (7%)

Query: 690 KIENLQNKIKGKEIDFDQEKSNLIKQNEQKMKDLTDEMENLKRKLLDNELDVVKDQLQKE 749
           ++ N Q  ++GK+ D   +    + + + ++     E+E     +LD E + +K  L K 
Sbjct: 694 QLGNAQEALEGKDKDAIGKVKTALGEAKTELDSAKQELEKDGLDVLDGE-EKLKGALDKL 752

Query: 750 KQKSQDLEEKIEEKDSTIQILKEKINENLEESKKSYDKLMNDKQEEIALLQKQINELQEL 809
             K+      ++E D  ++    K  + ++  K    + +N   E +  ++KQ+ E+ E 
Sbjct: 753 TTKNGGSSGILKEVDGALEKATNKDGKEVDPGKNKISEAINKVLEMLKEMEKQLKEVLEK 812

Query: 810 IKNNGESSKTKISSLLQENTNLNTKIQQLNSLLKQ 844
            ++N           + ENTNLN   +  +  +K+
Sbjct: 813 EQSN-----------MDENTNLNGHEKGFHKAIKE 836




 Score = 35.4 bits (80), Expect = 0.082,   Method: Composition-based stats.
 Identities = 41/197 (20%), Positives = 93/197 (47%), Gaps = 15/197 (7%)

Query: 1549 DELQKENESFQKELQTRDQNLDDSHKQIEELQAKIDQYEEEIKSKDENLNNLQNKINNYE 1608
            D ++ + +S  ++++     + +  K +E++   I++ +  + +  E +  L N     E
Sbjct: 644  DPMEHDRKSRVEKVKGELGGVINKLKALEKIGDGIEKAKALLVAIGEVVVQLGNAQEALE 703

Query: 1609 NESKTNNEKIKEMEGKQKSN-ELQINDLQNNVSQTENENKQLKSELEKLQTEIKSKSDQL 1667
             + K    K+K   G+ K+  +    +L+ +     +  ++LK  L+KL T+    S  L
Sbjct: 704  GKDKDAIGKVKTALGEAKTELDSAKQELEKDGLDVLDGEEKLKGALDKLTTKNGGSSGIL 763

Query: 1668 NEIQNESKSQSEQIVTFQGELKELQNKLTSSLKQIDELQKENESFQKELQTRDQ-NLDDS 1726
             E+    +  + +      E+   +NK++ ++ ++ E+ KE E   KE+  ++Q N+D++
Sbjct: 764  KEVDGALEKATNKD---GKEVDPGKNKISEAINKVLEMLKEMEKQLKEVLEKEQSNMDEN 820

Query: 1727 ----------HKQIEEL 1733
                      HK I+EL
Sbjct: 821  TNLNGHEKGFHKAIKEL 837




 Score = 35.4 bits (80), Expect = 0.088,   Method: Composition-based stats.
 Identities = 44/228 (19%), Positives = 105/228 (46%), Gaps = 43/228 (18%)

Query: 3197 DDLQQKLKSVIEEREKLEKEVNDLTQQIKSLKNEIEEQKEKSKKEIENFSEKLKSSNEEK 3256
            D ++   KS +E   K++ E+  +  ++K+L+ +I +  EK+K  +    E +      +
Sbjct: 644  DPMEHDRKSRVE---KVKGELGGVINKLKALE-KIGDGIEKAKALLVAIGEVVVQLGNAQ 699

Query: 3257 QKLQNQNDDLQQKLESIKEERENLKRENDLINKKLKSQSEELQKLNKEIDYSKSQIDSLD 3316
            + L+ ++ D   K+++   E +           +L S  +EL+K            D LD
Sbjct: 700  EALEGKDKDAIGKVKTALGEAKT----------ELDSAKQELEK------------DGLD 737

Query: 3317 EVNKKLNSTNEQENKQLNDQINKLTTK-------VNDLNNEIKKLTSEKNDLIDQNK-RL 3368
             ++ +         ++L   ++KLTTK       + +++  ++K T++    +D  K ++
Sbjct: 738  VLDGE---------EKLKGALDKLTTKNGGSSGILKEVDGALEKATNKDGKEVDPGKNKI 788

Query: 3369 NEDLSKKVNQFDEETQKLNEQLKRSKEEINDINNQNKKLDSLNNDLKQ 3416
            +E ++K +    E  ++L E L++ +  +++  N N      +  +K+
Sbjct: 789  SEAINKVLEMLKEMEKQLKEVLEKEQSNMDENTNLNGHEKGFHKAIKE 836




 Score = 31.2 bits (69), Expect = 1.5,   Method: Composition-based stats.
 Identities = 47/195 (24%), Positives = 83/195 (42%), Gaps = 8/195 (4%)

Query: 2352 NDYEQKVSKLEDEKRQLQNEMT---KYKDDNSTMKKVLTKQEKIIQKLNTKVEDLTETKQ 2408
            +D + +V K++ E   + N++    K  D     K +L    +++ +L    E L    +
Sbjct: 648  HDRKSRVEKVKGELGGVINKLKALEKIGDGIEKAKALLVAIGEVVVQLGNAQEALEGKDK 707

Query: 2409 TMKQTQSEELSSLEEENEQKKEELKHLKEEFLEKEKRLKG-LEKSIQKVTEKITSQKEEI 2467
                     L   + E +  K+EL+    + L+ E++LKG L+K   K        KE  
Sbjct: 708  DAIGKVKTALGEAKTELDSAKQELEKDGLDVLDGEEKLKGALDKLTTKNGGSSGILKEVD 767

Query: 2468 ENLRKQKLIDDNTISELKSSISEN-EKELENLRKSDSDKSDIIEQLKS---ESENLSMSL 2523
              L K    D   +   K+ ISE   K LE L++ +    +++E+ +S   E+ NL+   
Sbjct: 768  GALEKATNKDGKEVDPGKNKISEAINKVLEMLKEMEKQLKEVLEKEQSNMDENTNLNGHE 827

Query: 2524 KSRSNYENELTKLQN 2538
            K       EL  + N
Sbjct: 828  KGFHKAIKELISICN 842




 Score = 31.2 bits (69), Expect = 1.7,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 18/106 (16%)

Query: 1282 DSVTVKNSQIEEILKKNQVKFDKTGNKEQQLQVLNSSLKHSNDIIQEKGKTIDSQNKLIK 1341
            D +T KN     ILK+     +K  NK+              ++   K K  ++ NK+++
Sbjct: 750  DKLTTKNGGSSGILKEVDGALEKATNKD------------GKEVDPGKNKISEAINKVLE 797

Query: 1342 NLEDTKQKL------QKQNFDLQNNVSNLTNDLEKTKRELLSLQNS 1381
             L++ +++L      ++ N D   N++       K  +EL+S+ NS
Sbjct: 798  MLKEMEKQLKEVLEKEQSNMDENTNLNGHEKGFHKAIKELISICNS 843




 Score = 30.0 bits (66), Expect = 3.2,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 71/159 (44%), Gaps = 27/159 (16%)

Query: 1621 MEGKQKSNELQINDLQNNVSQTENENKQLKSELEKLQTEIKSKSDQLNEIQNESKSQSEQ 1680
            +EGK K     I  ++  + + + E    K ELEK         D L+ +  E K     
Sbjct: 702  LEGKDKD---AIGKVKTALGEAKTELDSAKQELEK---------DGLDVLDGEEK----- 744

Query: 1681 IVTFQGELKELQNKLTSS---LKQID-ELQKENESFQKELQTRDQNLDDSHKQIEELQAK 1736
                +G L +L  K   S   LK++D  L+K      KE+      + ++  ++ E+  +
Sbjct: 745  ---LKGALDKLTTKNGGSSGILKEVDGALEKATNKDGKEVDPGKNKISEAINKVLEMLKE 801

Query: 1737 IDQYEEEIKSKDENLNNLQNKINNYENESKTNNEKIKEM 1775
            +++  +E+  K+++  +    +N +E   K  ++ IKE+
Sbjct: 802  MEKQLKEVLEKEQSNMDENTNLNGHE---KGFHKAIKEL 837




 Score = 30.0 bits (66), Expect = 3.3,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 78/167 (46%), Gaps = 9/167 (5%)

Query: 1934 KQNEKLRENKEKNESEIISLQNRLSELTNSHNDELFTVKRKLEENNSIVKQQNAKIEMLK 1993
            K  EK+ +  EK ++ ++++   + +L N+        K  + +  + + +   +++  K
Sbjct: 669  KALEKIGDGIEKAKALLVAIGEVVVQLGNAQEALEGKDKDAIGKVKTALGEAKTELDSAK 728

Query: 1994 QQLIDQNKTIEDLQKIINESENLQFLVSTLKTENNTLKKVTQDND-LQNKKTNEDLLSQI 2052
            Q+L       +D   +++  E L+  +  L T+N     + ++ D    K TN+D   ++
Sbjct: 729  QELE------KDGLDVLDGEEKLKGALDKLTTKNGGSSGILKEVDGALEKATNKDG-KEV 781

Query: 2053 NDLQNKLKETEKSSQIQKSKYESQLNEIQSKLNQSIKDNSDLMDKHE 2099
            +  +NK+ E          + E QL E+  K   ++ +N++L + HE
Sbjct: 782  DPGKNKISEAINKVLEMLKEMEKQLKEVLEKEQSNMDENTNL-NGHE 827



>EAY10879.1 on XP_001609040  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1335

 Score = 45.1 bits (105), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 44/186 (23%), Positives = 91/186 (48%), Gaps = 11/186 (5%)

Query: 3077 KSSNELEERIRNLESQLKSHSSSLIELQEKKETEISKLQKEIDEREEKIKSQNEKLSNCR 3136
            K   E +  ++NL++ L++    +++L   +E    K        +E IK   EKL+  +
Sbjct: 645  KMMKESDPIVKNLKALLEAIGQVVVQLGNAQEALEGK-------DKEAIKKVKEKLTEAK 697

Query: 3137 KEVEKTKQEIEEMKAKLNSQLTEEIQTIKGEKEDLLEKIKSINKERDELSQQIKSLKREN 3196
              + K K+ ++++K  LN Q   E++  KG+  +L    K       +      SL++  
Sbjct: 698  GALGKAKEGLDQVKDGLNGQ--AELKEAKGKLGELTNGGKGALHILVDSGNTPGSLQQIV 755

Query: 3197 DDLQQKLKSVIEEREKLEKEVNDLTQQIKSLKNEIEEQ-KEKSKKEIENFSEKLKSSNEE 3255
            D  Q+  K     ++++ + ++ L + ++ LK  +E+Q KE++K+  +      K +N+E
Sbjct: 756  DSGQEWRKDYSSAKDRISEAIDGLHKVLEILKEGVEKQIKEEAKEAKKTLDVFFKLTNDE 815

Query: 3256 KQKLQN 3261
              KL+N
Sbjct: 816  -NKLEN 820




 Score = 31.2 bits (69), Expect = 1.8,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 69/153 (45%), Gaps = 20/153 (13%)

Query: 1630 LQINDLQNNVSQTENEN-KQLKSELEKLQTEIKSKSDQLNEIQNESKSQSEQIVTFQGEL 1688
            +Q+ + Q  +   + E  K++K +L + +  +    + L+++++    Q+E +   +G+L
Sbjct: 669  VQLGNAQEALEGKDKEAIKKVKEKLTEAKGALGKAKEGLDQVKDGLNGQAE-LKEAKGKL 727

Query: 1689 KELQN-------------KLTSSLKQI-DELQKENESFQKELQTRDQNLDDSHKQIEELQ 1734
             EL N                 SL+QI D  Q+  + +        + +D  HK +E L+
Sbjct: 728  GELTNGGKGALHILVDSGNTPGSLQQIVDSGQEWRKDYSSAKDRISEAIDGLHKVLEILK 787

Query: 1735 AKID-QYEEEIKSKDENLN---NLQNKINNYEN 1763
              ++ Q +EE K   + L+    L N  N  EN
Sbjct: 788  EGVEKQIKEEAKEAKKTLDVFFKLTNDENKLEN 820




 Score = 28.5 bits (62), Expect = 9.9,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 75/191 (39%), Gaps = 11/191 (5%)

Query: 3192 LKRENDDLQQKLKSVIEEREKLEKEVNDLTQQIKSLKNEIEEQKEKSKKEIENFSEKLKS 3251
            + +E+D + + LK+++E           + Q +  L N  E  + K K+ I+   EKL  
Sbjct: 646  MMKESDPIVKNLKALLEA----------IGQVVVQLGNAQEALEGKDKEAIKKVKEKLTE 695

Query: 3252 SNEEKQKLQNQNDDLQQKLESIKEERENLKRENDLINKKLKSQSEELQKLNKEIDYSKSQ 3311
            +     K +   D ++  L    E +E   +  +L N   K     L          +  
Sbjct: 696  AKGALGKAKEGLDQVKDGLNGQAELKEAKGKLGELTNGG-KGALHILVDSGNTPGSLQQI 754

Query: 3312 IDSLDEVNKKLNSTNEQENKQLNDQINKLTTKVNDLNNEIKKLTSEKNDLIDQNKRLNED 3371
            +DS  E  K  +S  ++ ++ ++     L      +  +IK+   E    +D   +L  D
Sbjct: 755  VDSGQEWRKDYSSAKDRISEAIDGLHKVLEILKEGVEKQIKEEAKEAKKTLDVFFKLTND 814

Query: 3372 LSKKVNQFDEE 3382
             +K  N   +E
Sbjct: 815  ENKLENVLKQE 825



>EAY10879.1 on XP_001611206  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1285

 Score = 37.4 bits (85), Expect = 0.024,   Method: Composition-based stats.
 Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 14/195 (7%)

Query: 1822 NEIQNESKSQSEQIVTFQDEVKSKDEKLQTQE-EQIKELENKLNELENSLRNKGDLQVQL 1880
            + ++++ K + +++    D V  K + L+ ++ E IKE+++ L  + N +   G+ Q  L
Sbjct: 614  DPMEHDRKCRVDKVKGELDGVMKKVKALEGEKTEGIKEVKDVLVTIGNVVVQLGNAQEAL 673

Query: 1881 NDREKELNNLKKVNENLVKQVEDLQVNKEQSDKKLSENDEELTNLRRNNADLKKQNE--- 1937
              ++KE  N   V E L K  E L   K++ DK   E   E   L +     KK +E   
Sbjct: 674  EGKDKEAIN--AVKEALEKAKEALGTAKQELDKVKDEEKLEEDELEKLKEATKKLDELTG 731

Query: 1938 KLRENKEKNESEIISLQNRLSELTNSHNDELFTVKRKLEENNSIVKQQNAKIEM-LKQQL 1996
            KL    EK+  E+   +N++SE  +        ++  +E  N + KQ    +E  +K   
Sbjct: 732  KLGTAAEKDGKEVDPGKNKISEAIHG-------LRYVVEALNKLAKQNEKNVECHVKGPY 784

Query: 1997 IDQNKTIEDLQKIIN 2011
             +    I+ LQ+I N
Sbjct: 785  NNILMAIDHLQEICN 799




 Score = 34.7 bits (78), Expect = 0.13,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 77/157 (49%), Gaps = 7/157 (4%)

Query: 3211 EKLEKEVNDLTQQIKSLKNEIEEQKEKSKKEIENFSEKLKSSNEEKQKLQNQNDDLQQKL 3270
            +K++ E++ + +++K+L+ E  E  ++ K  +      +      ++ L+ ++   ++ +
Sbjct: 625  DKVKGELDGVMKKVKALEGEKTEGIKEVKDVLVTIGNVVVQLGNAQEALEGKD---KEAI 681

Query: 3271 ESIKEERENLKRENDLINKKLKSQSEELQKLNKEIDYSKSQIDSLDEVNKKLNSTNEQEN 3330
             ++KE  E  K       ++L    +E +    E++  K     LDE+  KL +  E++ 
Sbjct: 682  NAVKEALEKAKEALGTAKQELDKVKDEEKLEEDELEKLKEATKKLDELTGKLGTAAEKDG 741

Query: 3331 KQLNDQINKLTTKVNDLNNEIKKLTSEKNDLIDQNKR 3367
            K+++   NK++  ++ L   ++ L    N L  QN++
Sbjct: 742  KEVDPGKNKISEAIHGLRYVVEAL----NKLAKQNEK 774




 Score = 29.6 bits (65), Expect = 4.7,   Method: Composition-based stats.
 Identities = 43/177 (24%), Positives = 85/177 (48%), Gaps = 28/177 (15%)

Query: 3161 IQTIKGEKEDLLEKIKSINKERDELSQQIKSLKRENDDLQQKLKSVIEEREKLEKEVNDL 3220
            +  +KGE + +++K+K++  E+ E  +++K +     ++  +L +  E  E  +KE    
Sbjct: 624  VDKVKGELDGVMKKVKALEGEKTEGIKEVKDVLVTIGNVVVQLGNAQEALEGKDKEA--- 680

Query: 3221 TQQIKSLKNEIEEQKEKSKKEIENFSEKLKSSNEEKQKLQNQNDDLQQKLESIKEERENL 3280
                    N ++E  EK+K       E L ++ +E  K++++    + +LE +KE  + L
Sbjct: 681  -------INAVKEALEKAK-------EALGTAKQELDKVKDEEKLEEDELEKLKEATKKL 726

Query: 3281 KRENDLINKKLKSQSEELQKLNKEIDYSKSQIDS----LDEVNKKLNSTNEQENKQL 3333
                D +  KL + +E   K  KE+D  K++I      L  V + LN   +Q  K +
Sbjct: 727  ----DELTGKLGTAAE---KDGKEVDPGKNKISEAIHGLRYVVEALNKLAKQNEKNV 776



>EAY10879.1 on XP_001609533  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1162

 Score = 37.0 bits (84), Expect = 0.024,   Method: Composition-based stats.
 Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 8/168 (4%)

Query: 3063 KENRTLKGIINSVKKSSNELEERIRNLESQLKSHSSSLIELQEKKETEISK--LQKEIDE 3120
            K N+   G   S  K   ++ E I  +  QL +   +L E ++K+     K  L+K   E
Sbjct: 620  KLNKLPLGSNGSDAKKIKDVLEAIGQVVVQLGNAQEAL-EGKDKEAINAVKTALEKAKGE 678

Query: 3121 REEKIKSQNEKLSNCRKEVEKTKQEIEEMKAKLNSQLTEEIQT-IKGEKEDLLEKI-KSI 3178
             EE +K  N  L     E +   + +    + +  ++ E+++T   GE +    KI +SI
Sbjct: 679  LEEAVKKVNGGLDVKLGEAKTALEALTNGGSGILGEVGEKLETATNGEYDPGKNKISESI 738

Query: 3179 NKERD---ELSQQIKSLKRENDDLQQKLKSVIEEREKLEKEVNDLTQQ 3223
            NK R+   EL + IK LK++  D   +L  V+ +    EKE+ ++ Q+
Sbjct: 739  NKVREVLKELEKVIKELKKKEVDDANELLGVVMDPYVPEKELQNILQR 786




 Score = 32.7 bits (73), Expect = 0.52,   Method: Composition-based stats.
 Identities = 43/186 (23%), Positives = 88/186 (47%), Gaps = 30/186 (16%)

Query: 1584 DQYEEEIKSKDENLNNLQNKINNYENESKTNNEKIKEMEGKQKSNELQINDLQNNVSQTE 1643
            D  E + K + + + N  NK+    N S  + +KIK++        +Q+ + Q  +   +
Sbjct: 604  DPMEHDRKWRVKEMGNKLNKLPLGSNGS--DAKKIKDVLEAIGQVVVQLGNAQEALEGKD 661

Query: 1644 NEN-KQLKSELEKLQTEIKSKSDQLN---EIQ-NESKSQSEQIVT--------------- 1683
             E    +K+ LEK + E++    ++N   +++  E+K+  E +                 
Sbjct: 662  KEAINAVKTALEKAKGELEEAVKKVNGGLDVKLGEAKTALEALTNGGSGILGEVGEKLET 721

Query: 1684 -FQGELKELQNKLTSSLKQIDELQKENESFQKELQTRDQNLDDSHKQIEELQAKIDQY-- 1740
               GE    +NK++ S+ ++ E+ KE E   KEL+ ++  +DD++   E L   +D Y  
Sbjct: 722  ATNGEYDPGKNKISESINKVREVLKELEKVIKELKKKE--VDDAN---ELLGVVMDPYVP 776

Query: 1741 EEEIKS 1746
            E+E+++
Sbjct: 777  EKELQN 782




 Score = 30.0 bits (66), Expect = 3.8,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 75/158 (47%), Gaps = 17/158 (10%)

Query: 3093 LKSHSSSLIELQEKKETEISKLQKEIDEREEKIKSQN-EKLSNCRKEVEKTKQEIEEMKA 3151
            L S+ S   ++++  E  I ++  ++   +E ++ ++ E ++  +  +EK K E+EE   
Sbjct: 626  LGSNGSDAKKIKDVLEA-IGQVVVQLGNAQEALEGKDKEAINAVKTALEKAKGELEEAVK 684

Query: 3152 KLNSQLTEEIQTIKGEKEDLLEKIKSINKERDELSQQIKSLKRENDDLQQKLKSVIEERE 3211
            K+N  L  ++   K   E L      I     E+ +++++      D           + 
Sbjct: 685  KVNGGLDVKLGEAKTALEALTNGGSGI---LGEVGEKLETATNGEYD---------PGKN 732

Query: 3212 KLEKEVNDLTQQIKSLKNEIEEQKEKSKKEIENFSEKL 3249
            K+ + +N + + +K L+  I+E K   KKE+++ +E L
Sbjct: 733  KISESINKVREVLKELEKVIKELK---KKEVDDANELL 767




 Score = 29.3 bits (64), Expect = 6.7,   Method: Composition-based stats.
 Identities = 38/189 (20%), Positives = 85/189 (44%), Gaps = 19/189 (10%)

Query: 688 KEKIENLQNKIKGKEIDFDQEKSNLIKQNEQKMKDLTDEMENLKRKL--LDNE-LDVVKD 744
           K +++ + NK+    +  +   +  IK   + +  +  ++ N +  L   D E ++ VK 
Sbjct: 611 KWRVKEMGNKLNKLPLGSNGSDAKKIKDVLEAIGQVVVQLGNAQEALEGKDKEAINAVKT 670

Query: 745 QLQKEKQKSQDLEEKIEEKDSTIQILKEKINENLEESKKSYDKLMNDKQEEIALLQKQIN 804
            L+K K    +LEE +++ +  + +        L E+K + + L N       +L +   
Sbjct: 671 ALEKAKG---ELEEAVKKVNGGLDV-------KLGEAKTALEALTNGGS---GILGEVGE 717

Query: 805 ELQELIKNNGESSKTKISSLLQENTNLNTKIQQLNSLLKQKDDKINDLQNEINDLTQNKI 864
           +L+       +  K KIS  + +   +   +++L  ++K+   K  D  NE+  +  +  
Sbjct: 718 KLETATNGEYDPGKNKISESINK---VREVLKELEKVIKELKKKEVDDANELLGVVMDPY 774

Query: 865 DLEKQIQNL 873
             EK++QN+
Sbjct: 775 VPEKELQNI 783



>EAY10879.1 on XP_001609667  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1303

 Score = 37.0 bits (84), Expect = 0.026,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 78/170 (45%), Gaps = 19/170 (11%)

Query: 1686 GELKELQNKLTSSLKQIDELQK--------ENESFQKELQTRDQNLDDSHKQIEELQAKI 1737
            G+LK++  K+   + Q+   Q+        E +  QK+LQ   + L+++ K   EL+   
Sbjct: 659  GKLKDVLEKIGEVVVQLGNAQEALERRKGEEIKGVQKKLQEAKKGLEEARK---ELETGE 715

Query: 1738 DQYEEEIKSKDENLNNLQN----KINNYENESKTNNEKIKEMEGKQKSNELQINDLQNNV 1793
            D  E+++K   E L  L N     ++   N S T    + ++       + + +  ++ +
Sbjct: 716  DLDEDDLKEAKEALGELTNGGGGALHTLANGSNTAGS-LHQVATAGADWQKEYSSAKDKI 774

Query: 1794 SQTENENKQLKSELEKLQTEIKSKSDQLNEIQNESKSQSEQIVTFQDEVK 1843
            S+  +   +++  L  LQTE+   S  LN  ++E     EQ+++  +  K
Sbjct: 775  SEVIH---KIQEVLTALQTEVPQVSSHLNGHKDEFTKAIEQLISICNTAK 821




 Score = 36.2 bits (82), Expect = 0.049,   Method: Composition-based stats.
 Identities = 37/164 (22%), Positives = 76/164 (46%), Gaps = 19/164 (11%)

Query: 1532 GELKEIQNKLINSLKQIDELQK--------ENESFQKELQTRDQNLDDSHKQIEELQAKI 1583
            G+LK++  K+   + Q+   Q+        E +  QK+LQ   + L+++ K   EL+   
Sbjct: 659  GKLKDVLEKIGEVVVQLGNAQEALERRKGEEIKGVQKKLQEAKKGLEEARK---ELETGE 715

Query: 1584 DQYEEEIKSKDENLNNLQN----KINNYENESKTNNEKIKEMEGKQKSNELQINDLQNNV 1639
            D  E+++K   E L  L N     ++   N S T    + ++       + + +  ++ +
Sbjct: 716  DLDEDDLKEAKEALGELTNGGGGALHTLANGSNTAGS-LHQVATAGADWQKEYSSAKDKI 774

Query: 1640 SQTENENKQLKSELEKLQTEIKSKSDQLNEIQNESKSQSEQIVT 1683
            S+  +   +++  L  LQTE+   S  LN  ++E     EQ+++
Sbjct: 775  SEVIH---KIQEVLTALQTEVPQVSSHLNGHKDEFTKAIEQLIS 815




 Score = 31.2 bits (69), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 31/53 (58%)

Query: 633 DLKQENMKLKDKINDLQNNLQKILQENENHSKQISTHIDGLSQSIKERDDQIL 685
           D ++E    KDKI+++ + +Q++L   +    Q+S+H++G      +  +Q++
Sbjct: 762 DWQKEYSSAKDKISEVIHKIQEVLTALQTEVPQVSSHLNGHKDEFTKAIEQLI 814




 Score = 30.4 bits (67), Expect = 2.4,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 56/127 (44%), Gaps = 17/127 (13%)

Query: 2101 ELKNLDEKLQESQKQKNDLEKKFEMNSKLLNENNKLRQEKFDK-------TLEELTNVKS 2153
            E+K + +KLQE++K   +  K+ E    L  ++ K  +E   +        L  L N  +
Sbjct: 689  EIKGVQKKLQEAKKGLEEARKELETGEDLDEDDLKEAKEALGELTNGGGGALHTLANGSN 748

Query: 2154 ENGKLKEQID---DLEKEKNEMTILLNTTQNNQNEDLQNLQKKLNATIDELKMTTNDYNS 2210
              G L +      D +KE        ++ ++  +E +  +Q+ L A   E+   ++  N 
Sbjct: 749  TAGSLHQVATAGADWQKE-------YSSAKDKISEVIHKIQEVLTALQTEVPQVSSHLNG 801

Query: 2211 LKEKFEK 2217
             K++F K
Sbjct: 802  HKDEFTK 808




 Score = 29.3 bits (64), Expect = 6.3,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 64/156 (41%), Gaps = 24/156 (15%)

Query: 3707 SGTFSVMEDPISEEIEQLKDENNKMKKDLSQKIRNLQKDNEFLKSELEKTKSEKENG--- 3763
            +G    + + I E + QL +    +++   ++I+ +QK  +  K  LE+ + E E G   
Sbjct: 658  AGKLKDVLEKIGEVVVQLGNAQEALERRKGEEIKGVQKKLQEAKKGLEEARKELETGEDL 717

Query: 3764 ----LLGTKLSISEISNDNDVYLMKINN----------------DLVKENSELKIRIS-L 3802
                L   K ++ E++N     L  + N                D  KE S  K +IS +
Sbjct: 718  DEDDLKEAKEALGELTNGGGGALHTLANGSNTAGSLHQVATAGADWQKEYSSAKDKISEV 777

Query: 3803 LEKENEEMKQINKEKKDRTSEMLREKDMRKRMEEEL 3838
            + K  E +  +  E    +S +   KD   +  E+L
Sbjct: 778  IHKIQEVLTALQTEVPQVSSHLNGHKDEFTKAIEQL 813




 Score = 28.5 bits (62), Expect = 9.5,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 76/157 (48%), Gaps = 10/157 (6%)

Query: 1938 KLRENKEKNESEIISLQNRLSELTNSHNDELFTVKRKLEENNSIVKQQNAKIEMLKQQLI 1997
            KL++  EK    ++ L N    L     +E+  V++KL+E    +++  A+ E+   + +
Sbjct: 660  KLKDVLEKIGEVVVQLGNAQEALERRKGEEIKGVQKKLQEAKKGLEE--ARKELETGEDL 717

Query: 1998 DQNKTIEDLQKIINESEN-----LQFLVSTLKTENNTLKKVTQDNDLQNKKTNEDLLSQI 2052
            D++  +++ ++ + E  N     L  L +   T  +  +  T   D Q + ++     +I
Sbjct: 718  DEDD-LKEAKEALGELTNGGGGALHTLANGSNTAGSLHQVATAGADWQKEYSSAK--DKI 774

Query: 2053 NDLQNKLKETEKSSQIQKSKYESQLNEIQSKLNQSIK 2089
            +++ +K++E   + Q +  +  S LN  + +  ++I+
Sbjct: 775  SEVIHKIQEVLTALQTEVPQVSSHLNGHKDEFTKAIE 811



>EAY10879.1 on XP_001608668  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1337

 Score = 35.8 bits (81), Expect = 0.062,   Method: Composition-based stats.
 Identities = 46/212 (21%), Positives = 82/212 (38%), Gaps = 23/212 (10%)

Query: 2035 QDNDLQNKKTNEDLLSQINDLQNKLKETEKSSQIQKSKYESQLNEIQSKLNQSIKDNSDL 2094
             D   +  K  EDL+  +N ++  L E  K  +    +    L  I S + Q       L
Sbjct: 650  HDRKCRVDKVKEDLVGLVNKVKVGL-EGNKDEEADGEELFDVLKAIGSVVVQLGNAQEAL 708

Query: 2095 MDKHENEL-----KNLDEKLQESQKQKNDLEKKFEMNSKLLNENNK-----------LRQ 2138
              K E+++     + L E  +E +K K  +E +  M+ K L E  K           +R 
Sbjct: 709  EGKAESKVIEGVKQKLGEAKKELEKAKEAVESEVGMDGKELEEAKKAVEKAKTEGDNVRM 768

Query: 2139 EKFDKTLEELTNVKSENGKLKEQ------IDDLEKEKNEMTILLNTTQNNQNEDLQNLQK 2192
             K +K ++ L N K    KL         ++ L       ++    + N ++ D  + + 
Sbjct: 769  AKLEKKMKALENAKDALNKLMTSGGSNGALNTLANGGGNGSLQQIGSANEKDRDYSSAKD 828

Query: 2193 KLNATIDELKMTTNDYNSLKEKFEKLNGKSDN 2224
            +++  I+ +  T      LK     LNG  D+
Sbjct: 829  QISDAINGINQTLEALQLLKRASTTLNGHRDD 860




 Score = 35.0 bits (79), Expect = 0.12,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 65/142 (45%), Gaps = 17/142 (11%)

Query: 3061 LKKENRTLKGIINSVK---KSSNELEERIRNLESQLKSHSSSLIELQEKKETEISKLQKE 3117
            + K    L G++N VK   + + + E     L   LK+  S +++L   +E    K + +
Sbjct: 656  VDKVKEDLVGLVNKVKVGLEGNKDEEADGEELFDVLKAIGSVVVQLGNAQEALEGKAESK 715

Query: 3118 IDEREEKIKSQNEKLSNCRKEVEKTKQEIEEMKAKLNSQLTEEIQTIKGEKED------- 3170
            +      I+   +KL   +KE+EK K+ +E        +L E  + ++  K +       
Sbjct: 716  V------IEGVKQKLGEAKKELEKAKEAVESEVGMDGKELEEAKKAVEKAKTEGDNVRMA 769

Query: 3171 -LLEKIKSINKERDELSQQIKS 3191
             L +K+K++   +D L++ + S
Sbjct: 770  KLEKKMKALENAKDALNKLMTS 791




 Score = 34.3 bits (77), Expect = 0.19,   Method: Composition-based stats.
 Identities = 56/249 (22%), Positives = 107/249 (42%), Gaps = 53/249 (21%)

Query: 679 ERDDQILKDKEKIENLQNKIK-GKEIDFDQEKS-----NLIKQNEQKMKDLTDEMENLKR 732
           +R  ++ K KE +  L NK+K G E + D+E       +++K     +  L +  E L+ 
Sbjct: 651 DRKCRVDKVKEDLVGLVNKVKVGLEGNKDEEADGEELFDVLKAIGSVVVQLGNAQEALEG 710

Query: 733 KLLDNELDVVKDQLQKEKQKSQDLEEKIEEKDSTIQILKEKINENLEESKKSYDKLMNDK 792
           K     ++ VK +L + K++ +  +E +E +            + LEE+KK+ +K   + 
Sbjct: 711 KAESKVIEGVKQKLGEAKKELEKAKEAVESEVGMD-------GKELEEAKKAVEKAKTEG 763

Query: 793 QE-EIALLQKQINELQELIKNNGESSKTKISSLLQENTNLNT--------KIQQLNSLLK 843
               +A L+K++  L+     N + +  K+ +    N  LNT         +QQ+ S   
Sbjct: 764 DNVRMAKLEKKMKALE-----NAKDALNKLMTSGGSNGALNTLANGGGNGSLQQIGS-AN 817

Query: 844 QKDDKINDLQNEINDLTQNKIDLEKQIQNLQTIIFDSKSQIESLNEKISGLQQLLKSSQE 903
           +KD   +  +++I+D                         I  +N+ +  L QLLK +  
Sbjct: 818 EKDRDYSSAKDQISD------------------------AINGINQTLEAL-QLLKRAST 852

Query: 904 TIDSLNDKI 912
           T++   D I
Sbjct: 853 TLNGHRDDI 861




 Score = 31.2 bits (69), Expect = 1.6,   Method: Composition-based stats.
 Identities = 42/205 (20%), Positives = 90/205 (43%), Gaps = 18/205 (8%)

Query: 1714 KELQTRDQNLDDSHKQIEELQAKIDQYEEEIKSKDEN--LNNLQNKINNYENESKTNNEK 1771
            K+ +   + L D  K I  +  ++   +E ++ K E+  +  ++ K+   + E +   E 
Sbjct: 678  KDEEADGEELFDVLKAIGSVVVQLGNAQEALEGKAESKVIEGVKQKLGEAKKELEKAKEA 737

Query: 1772 I--------KEMEGKQKSNELQINDLQN-NVSQTENENKQL---KSELEKLQTEIKSKSD 1819
            +        KE+E  +K+ E    +  N  +++ E + K L   K  L KL T   S   
Sbjct: 738  VESEVGMDGKELEEAKKAVEKAKTEGDNVRMAKLEKKMKALENAKDALNKLMTSGGSNG- 796

Query: 1820 QLNEIQNESKSQSEQIVTFQDEVKSKDEKLQTQEEQIKELENKLNELENSLRNKGDLQVQ 1879
             LN + N   + S Q +   +E   KD    + ++QI +  N +N+   +L+        
Sbjct: 797  ALNTLANGGGNGSLQQIGSANE---KDRDYSSAKDQISDAINGINQTLEALQLLKRASTT 853

Query: 1880 LNDREKELNNLKKVNENLVKQVEDL 1904
            LN    +++++  + E  +  ++++
Sbjct: 854  LNGHRDDISDVFMIYEKTITDLKEI 878




 Score = 30.0 bits (66), Expect = 3.6,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 68/153 (44%), Gaps = 32/153 (20%)

Query: 3062 KKENRTLKGIINSVKKSSNELEERIRNLESQLKSHSSSLIELQEKKETEISKLQKEIDER 3121
            K E++ ++G+   + ++  ELE+                   +E  E+E+    KE++E 
Sbjct: 711  KAESKVIEGVKQKLGEAKKELEKA------------------KEAVESEVGMDGKELEEA 752

Query: 3122 EEKIKSQNEKLSNCR-KEVEKTKQEIEEMKAKLNSQLTE-----EIQTI-KGEKEDLLEK 3174
            ++ ++    +  N R  ++EK  + +E  K  LN  +T       + T+  G     L++
Sbjct: 753  KKAVEKAKTEGDNVRMAKLEKKMKALENAKDALNKLMTSGGSNGALNTLANGGGNGSLQQ 812

Query: 3175 IKSINKE-------RDELSQQIKSLKRENDDLQ 3200
            I S N++       +D++S  I  + +  + LQ
Sbjct: 813  IGSANEKDRDYSSAKDQISDAINGINQTLEALQ 845



>EAY10879.1 on XP_803378  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 506

 Score = 35.4 bits (80), Expect = 0.077,   Method: Composition-based stats.
 Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 4/110 (3%)

Query: 1966 DELFTVK---RKLEENNSIVKQQNAKIEMLKQQLIDQNKTIEDLQKIINESENLQFLVST 2022
            D+L TV+   R  ++N  I KQ   KIE LKQ +    K  E L     +  +   L +T
Sbjct: 341  DKLETVETSLRTRQQNQDIQKQAQTKIETLKQLVKAAAKHAEKLTAPTTQHHSNPKLATT 400

Query: 2023 LKTENNTLKKVTQDNDLQNKKTNEDLLSQINDLQNKLKETEKSSQIQKSK 2072
               +N+  +K    + L+  +   D+  + N+  NK +E  KS  +Q +K
Sbjct: 401  -NDKNSQAQKTADCSKLEKAECKPDVGCRYNETTNKCEEDPKSPVVQANK 449



>EAY10879.1 on XP_001608665  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1326

 Score = 35.4 bits (80), Expect = 0.094,   Method: Composition-based stats.
 Identities = 46/177 (25%), Positives = 79/177 (44%), Gaps = 19/177 (10%)

Query: 2111 ESQKQKNDLEKKFEMNSKLLNENNKL---RQEKFDKTLEELTNVKSENGKLKEQI--DDL 2165
            E +K K  LEK  E+  +L N    L   + E  +K  EELT  K+   KL++ +  D L
Sbjct: 694  EEEKAKALLEKIGEVVVQLGNAQEALEGKKTEAIEKVKEELTEAKT---KLEDAVKKDGL 750

Query: 2166 EKEKNEMTILLNTTQNNQNEDLQNLQKKLNATIDELKMTTNDYNSLKEKFEK-LNGKSDN 2224
              +  E T  L    NN   D    +  L+  +D    + +   +  ++++K  +   D 
Sbjct: 751  TGKLAEATKKLEALTNNGGGD----KGALHILVDSGPGSLHQVATASKEYDKDYSSGKDR 806

Query: 2225 DNSLISSLKRENDKMKN------DLQKTQEENKSLVLKLNENEKTISKLQKTNDEIS 2275
             ++ IS ++   + +K       + QKT +EN  +VL+L   ++    L    D IS
Sbjct: 807  ISAAISGVREVLELIKGWAKGEIEKQKTAKENMKVVLRLEIPQEYTKLLNDIEDLIS 863




 Score = 30.8 bits (68), Expect = 2.2,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 76/173 (43%), Gaps = 12/173 (6%)

Query: 687 DKEKIENLQNKIKGKEIDFDQEKSNLIKQNEQKMKDLTDEMENLKRKLLDN-ELDVVKDQ 745
           ++EK + L  KI    +     +  L  +  + ++ + +E+   K KL D  + D +  +
Sbjct: 694 EEEKAKALLEKIGEVVVQLGNAQEALEGKKTEAIEKVKEELTEAKTKLEDAVKKDGLTGK 753

Query: 746 LQKEKQKSQDLEEKIEEKDSTIQILKEKINENLEE---SKKSYDKLMNDKQEEIALLQKQ 802
           L +  +K + L          + IL +    +L +   + K YDK  +  ++ I+     
Sbjct: 754 LAEATKKLEALTNNGGGDKGALHILVDSGPGSLHQVATASKEYDKDYSSGKDRISAAISG 813

Query: 803 INELQELIKN--NGESSKTKISSLLQENTNLNTKI---QQLNSLLKQKDDKIN 850
           + E+ ELIK    GE  K K +   +EN  +  ++   Q+   LL   +D I+
Sbjct: 814 VREVLELIKGWAKGEIEKQKTA---KENMKVVLRLEIPQEYTKLLNDIEDLIS 863



>EAY10879.1 on XP_001609041  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1318

 Score = 34.7 bits (78), Expect = 0.13,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 86/181 (47%), Gaps = 27/181 (14%)

Query: 3174 KIKSINKERDELSQQIKSL-----KRENDDLQQKLKSVIEEREKLEKEVNDLTQQIKSLK 3228
            +++++ K  DEL +++K+L       E + + +K+K+++E+          + + +  L 
Sbjct: 653  RVENMKKILDELVEKVKALEGEKDDEEEEGIAEKVKALLEK----------IGEVVVQLG 702

Query: 3229 NEIEEQKEKSKKEIENFSEKLKSSNEEKQKLQNQNDDLQQKLESIKEERENLKRENDLIN 3288
            N  E  + K K  IE    +L+ + EE          L + ++ +K+  EN   E     
Sbjct: 703  NAQEALEGKDKGAIEGVKRELEKAKEE----------LVEAVKQVKDAVENCGLEEAKNK 752

Query: 3289 KKLKSQSEELQKLNK-EIDYSKSQID-SLDEVNKKLNSTNEQENKQLNDQINKLTTKVND 3346
             +  + +  L K N  E D  K++I  ++D V K L +  ++  KQL + + K  + ++D
Sbjct: 753  LEELTGNGGLDKANSGEYDPGKNKISAAIDGVCKALEALKKEMEKQLKEVLEKEQSDMDD 812

Query: 3347 L 3347
            +
Sbjct: 813  I 813




 Score = 29.6 bits (65), Expect = 4.8,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 5/133 (3%)

Query: 3082 LEERIRNLESQLKSHSSSLIELQEKKETEISK--LQKEIDEREEKIKSQNEKLSNCRKEV 3139
            L E+I  +  QL +   +L E ++K   E  K  L+K  +E  E +K   + + NC  E 
Sbjct: 690  LLEKIGEVVVQLGNAQEAL-EGKDKGAIEGVKRELEKAKEELVEAVKQVKDAVENCGLEE 748

Query: 3140 EKTKQEIEEMKAKLNSQLTEEIQTIKGEKEDLLEKI-KSINKERDELSQQIKS-LKREND 3197
             K K E       L+   + E    K +    ++ + K++   + E+ +Q+K  L++E  
Sbjct: 749  AKNKLEELTGNGGLDKANSGEYDPGKNKISAAIDGVCKALEALKKEMEKQLKEVLEKEQS 808

Query: 3198 DLQQKLKSVIEER 3210
            D+    K  I E+
Sbjct: 809  DMDDITKWFIREK 821



>EAY10879.1 on XP_001611365  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1335

 Score = 34.7 bits (78), Expect = 0.15,   Method: Composition-based stats.
 Identities = 46/205 (22%), Positives = 88/205 (42%), Gaps = 34/205 (16%)

Query: 3059 KNLKKENRTLKGIINSVKKSSNELEERIRNLESQLKSHSSSLIELQEKKETEISKLQKEI 3118
            K + K    L  ++  VK    E  + I   ++ L +    +++L   +E    K     
Sbjct: 644  KRVDKVKEELGKVVKKVKLLEGEKADGIEKAKALLVAIGDVVVQLGNAQEALEGK----- 698

Query: 3119 DEREEKIKSQNEKLSNCRKEVEKTKQEIEEMKAK--------------LNSQLTEEIQTI 3164
              + E I +  EKL+  + E+E  K++++E   K              L+ +L E     
Sbjct: 699  --KTEGINAVKEKLTEAKGELEGAKEKLDEAVKKGMGGLMDGMGGLDVLDGKLGELTGNG 756

Query: 3165 KGEK---EDLLEKI------KSINKERDELSQQI----KSLKRENDDLQQKLKSVIEERE 3211
             G     +DL  K+      K ++  ++E+S+ I    + LK     L++ LK++ +E E
Sbjct: 757  GGSSGILKDLEGKLDTATGGKEVDPGKNEVSKAIHKVWEVLKEMEKQLKEVLKNIKDEIE 816

Query: 3212 KLEKEVNDLTQQIKSLKNEIEEQKE 3236
            + E +++D T +I   K   +  KE
Sbjct: 817  QYESDMDDNTGRIIQEKTFYKAVKE 841



>EAY10879.1 on XP_001608795  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1323

 Score = 34.7 bits (78), Expect = 0.15,   Method: Composition-based stats.
 Identities = 38/164 (23%), Positives = 70/164 (42%), Gaps = 19/164 (11%)

Query: 3436 NEQKKKFDSVKEENLRLNSLNNELKQENEEISKKLKSLNEQIKEITNENNQDQIDLLNKK 3495
            +++K + D VKEE      L   + +  + ++ K+K+L E I ++  +    Q  L  KK
Sbjct: 630  HDRKCRVDKVKEE------LGKVVSKGKDTVAVKVKALLEAIGQVVVQLGNAQEALEGKK 683

Query: 3496 LNENETFTRKLNDDKENLAKKLQISNEENKKLNKKVEDLSE----------ELEESKQRE 3545
                E    KL + +E L   +  +   + KL +    L E          ++E++    
Sbjct: 684  KEAIEGVKGKLTEAREGLETAVNGNGGMDGKLGEAKNKLGELTNGGSGILKDVEDALGTA 743

Query: 3546 ENSLIDLQNKNETLENLKTQIKKQKQQIQEINRENNNLKQELEN 3589
            +N   D+ N +     +   IK  +  + E+ +    LKQE EN
Sbjct: 744  QN---DVTNVDPGKNKISAAIKGVRNVLDELRKGVEGLKQEKEN 784




 Score = 31.6 bits (70), Expect = 1.3,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 77/161 (47%), Gaps = 13/161 (8%)

Query: 3121 REEKIKSQNEKLSNCRKEVEKTK-QEIEEMKAKLNSQLTEEIQTIKGEKEDLLEKIK-SI 3178
            R +K+K +  K+ +  K+    K + + E   ++  QL    + ++G+K++ +E +K  +
Sbjct: 635  RVDKVKEELGKVVSKGKDTVAVKVKALLEAIGQVVVQLGNAQEALEGKKKEAIEGVKGKL 694

Query: 3179 NKERDELSQQIKSLKRENDDLQQKLKSVIEEREKLEKEVNDLTQQIKSLKNEIEEQKEKS 3238
             + R+ L   +      N  +  KL    E + KL     +LT     +  ++E+    +
Sbjct: 695  TEAREGLETAVNG----NGGMDGKLG---EAKNKL----GELTNGGSGILKDVEDALGTA 743

Query: 3239 KKEIENFSEKLKSSNEEKQKLQNQNDDLQQKLESIKEEREN 3279
            + ++ N        +   + ++N  D+L++ +E +K+E+EN
Sbjct: 744  QNDVTNVDPGKNKISAAIKGVRNVLDELRKGVEGLKQEKEN 784




 Score = 31.2 bits (69), Expect = 1.5,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 72/165 (43%), Gaps = 11/165 (6%)

Query: 739 LDVVKDQLQKEKQKSQDLEEKIEEKDSTIQILKEKINENLEESKKSYDKLMNDKQEEIAL 798
           +D VK++L K   K +D           ++ L E I + + +   + + L   K+E I  
Sbjct: 636 VDKVKEELGKVVSKGKDTVA------VKVKALLEAIGQVVVQLGNAQEALEGKKKEAIEG 689

Query: 799 LQKQINELQELIKNNGESSKTKISSLLQENTNLNTKIQQLNSLLKQKDDKINDLQNEIND 858
           ++ ++ E +E ++     +      L +    L       + +LK  +D +   QN++ +
Sbjct: 690 VKGKLTEAREGLETAVNGNGGMDGKLGEAKNKLGELTNGGSGILKDVEDALGTAQNDVTN 749

Query: 859 LTQNKIDLEKQIQNLQTIIFDSKSQIESL-----NEKISGLQQLL 898
           +   K  +   I+ ++ ++ + +  +E L     NE + GL ++ 
Sbjct: 750 VDPGKNKISAAIKGVRNVLDELRKGVEGLKQEKENEIMCGLSEVF 794



>EAY10879.1 on XP_001609666  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1269

 Score = 34.3 bits (77), Expect = 0.19,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 48/95 (50%), Gaps = 7/95 (7%)

Query: 1382 KNDNIKQLEQEKELILKQKENENKISE------EKIKNLTLQISNLQNTISQKDNEIQNN 1435
            ++D   ++++ K+++ K    ++ ++E      EKI  + +Q+ N Q  +  KD ++   
Sbjct: 582  EHDRKSRVKELKKILWKVPSGKDTLAEKLKDVLEKIGEVVVQLGNAQEALETKDKDVIEK 641

Query: 1436 LQN-LQKVSNELDFIKNSTKDHENDLTEKEDVINN 1469
            ++  L+K    L+  KN  KD   +  +K D + N
Sbjct: 642  VKEALRKAKEGLETAKNGLKDKLEEAKKKLDELTN 676




 Score = 32.3 bits (72), Expect = 0.72,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 13/97 (13%)

Query: 3184 ELSQQIKSLKRENDDLQQKLKSVIEEREKLEKEVNDLTQQIKSLKNEIEEQKEKSKKEIE 3243
            EL + +  +    D L +KLK V+E+          + + +  L N  E  + K K  IE
Sbjct: 591  ELKKILWKVPSGKDTLAEKLKDVLEK----------IGEVVVQLGNAQEALETKDKDVIE 640

Query: 3244 NFSEKLKSSNEEKQKLQNQNDDLQQKLESIKEERENL 3280
               E L+ +   K+ L+   + L+ KLE  K++ + L
Sbjct: 641  KVKEALRKA---KEGLETAKNGLKDKLEEAKKKLDEL 674




 Score = 30.4 bits (67), Expect = 2.5,   Method: Composition-based stats.
 Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 9/100 (9%)

Query: 2951 ENDDKNREIKKLSNTLQKGDIEMNTLKDLLQTKEEKIRNYEDILEKTKTQMEDKNYEFSK 3010
            E+D K+R +K+L   L K     +TL + L+   EKI      L   +  +E K+ +  +
Sbjct: 582  EHDRKSR-VKELKKILWKVPSGKDTLAEKLKDVLEKIGEVVVQLGNAQEALETKDKDVIE 640

Query: 3011 TVKDQNDKI--------NQLEKELEQRDLELDDLTNKSKS 3042
             VK+   K         N L+ +LE+   +LD+LTN   S
Sbjct: 641  KVKEALRKAKEGLETAKNGLKDKLEEAKKKLDELTNGGGS 680




 Score = 30.4 bits (67), Expect = 2.7,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 33/55 (60%), Gaps = 1/55 (1%)

Query: 1140 DLEAQIRELKRLLANDDGNKQVIAQKDKEILS-LNQTIIDLQHNNQLLNDKIKDI 1193
            D +++++ELK++L      K  +A+K K++L  + + ++ L +  + L  K KD+
Sbjct: 584  DRKSRVKELKKILWKVPSGKDTLAEKLKDVLEKIGEVVVQLGNAQEALETKDKDV 638



>EAY10879.1 on XP_001611147  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1304

 Score = 33.5 bits (75), Expect = 0.35,   Method: Composition-based stats.
 Identities = 45/209 (21%), Positives = 82/209 (39%), Gaps = 30/209 (14%)

Query: 3317 EVNKKLNS----TNEQENKQLNDQINKLTTKVNDLNNEIKKLTSEKNDLIDQNKRL---- 3368
            E+  KLN     +N  + K++ D +  +   V  L N  + L  +K + I+  K      
Sbjct: 638  EMGNKLNKLPLGSNGSDAKKIKDVLEAIGQVVVQLGNAQEALEGKKTEAINAVKTALGTA 697

Query: 3369 NEDLSKKVNQFDEETQKLN-----EQLKRSKEEINDINNQNKKLDSLNNDLKQENNKLNH 3423
              +L K   + D   +++      ++L ++KE +  +     K D L + +         
Sbjct: 698  KTELEKARTELDTAVKQVKSGLTGKELTKAKEALEKLTGNGGKGDLLGDVVGHSG----- 752

Query: 3424 EITKLNSLTNEFNEQKKKFDS-VKEENLRLNSLNNELKQENEE--------ISKKLKSLN 3474
             + K++S   E++  K K  + +K     L +L  ELK +           ++       
Sbjct: 753  -LGKVDS--GEYDPGKNKISAAIKGVRDALEALKEELKDDKSPLYGTLPGWVATSFHQAT 809

Query: 3475 EQIKEITNENNQDQIDLLNKKLNENETFT 3503
            EQIK+I       Q DL +KK       T
Sbjct: 810  EQIKDICTSPKCHQCDLHSKKCGRPSNLT 838



>EAY10879.1 on XP_001609315  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1338

 Score = 33.1 bits (74), Expect = 0.42,   Method: Composition-based stats.
 Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 21/140 (15%)

Query: 3900 SLKGRNNESILEENE----RLKEELENARNESVSNDSYLKINE--------------EVE 3941
            +L+G+    ++E  +    + K ELE   +E+ +N+   KI E              EVE
Sbjct: 710  ALEGKAESKVIEGVKVALTKAKTELEGVVDENANNELKEKIKELTNGSGGGKGNLLGEVE 769

Query: 3942 KNLQTA--LESLQNAKDENERLTKKLQKTERENKSLKQIIKS-SEDLKSSEFEEEIDNLK 3998
              L+ A  +E  ++  +  ++++  + K     K L ++ K   E+LK      E  N K
Sbjct: 770  GALENAKNIEKERDYSNAKDKISAAIHKVLEVLKILTKLAKQYEEELKDKMKGNEPTNNK 829

Query: 3999 TEVKKLRKEKKSFTNVASKM 4018
             E+    KE K F N+   M
Sbjct: 830  IELISFIKELKEFLNIIDDM 849




 Score = 30.0 bits (66), Expect = 3.5,   Method: Composition-based stats.
 Identities = 42/175 (24%), Positives = 85/175 (48%), Gaps = 22/175 (12%)

Query: 2713 KEREDLQSEIEELKMKFDLEQKENENLKKQNKEIKNQFETTKSEKIYLEKDISNAKTELN 2772
            KE +DL  +I E+ ++    Q+  E         K + +  +  K+ L K    AKTEL 
Sbjct: 688  KELKDLLEKIGEVVVQLGNAQEALEG--------KAESKVIEGVKVALTK----AKTELE 735

Query: 2773 DLLDKNNKLESELRKKEREITRLS--YSENKLNDLQIELNKLKS--EMKDKTSEIERLSN 2828
             ++D+N    +EL++K +E+T  S     N L +++  L   K+  + +D ++  +++S 
Sbjct: 736  GVVDENAN--NELKEKIKELTNGSGGGKGNLLGEVEGALENAKNIEKERDYSNAKDKISA 793

Query: 2829 ELSLKSEEIYSFSCSSNSFEKEIQTKSDKIKSLENEIKKVQKENEQIKDLENQLN 2883
             +    E +   +  +  +E+E++ K    +   N+I+ +      IK+L+  LN
Sbjct: 794  AIHKVLEVLKILTKLAKQYEEELKDKMKGNEPTNNKIELISF----IKELKEFLN 844




 Score = 30.0 bits (66), Expect = 4.0,   Method: Composition-based stats.
 Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 7/114 (6%)

Query: 3061 LKKENRTLKGIINSVKKSSNELEERIRNLESQLKSHSSSLIELQEKKETEISKLQKEID- 3119
            L K    L+G+++  + ++NEL+E+I+ L +       +L+   E        ++KE D 
Sbjct: 727  LTKAKTELEGVVD--ENANNELKEKIKELTNGSGGGKGNLLGEVEGALENAKNIEKERDY 784

Query: 3120 -EREEKIKSQNEKLSNCRKEVEK-TKQEIEEMKAKL--NSQLTEEIQTIKGEKE 3169
               ++KI +   K+    K + K  KQ  EE+K K+  N     +I+ I   KE
Sbjct: 785  SNAKDKISAAIHKVLEVLKILTKLAKQYEEELKDKMKGNEPTNNKIELISFIKE 838



>EAY10879.1 on XP_001610567  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1315

 Score = 32.7 bits (73), Expect = 0.51,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 60/125 (48%), Gaps = 7/125 (5%)

Query: 3131 KLSNCRKEVE-KTKQEIEEMKAKLNSQLTEEIQTIKGEKEDLLEKIKSINKERDELSQQI 3189
            +L N ++ +E K K+ IE +KAKL  +  E +   +   E+  +K+       +EL++  
Sbjct: 688  QLGNAQEALEGKKKEAIEGVKAKLQ-EAKEGLDKARTALEEAAKKVNGDGLSGNELTKAK 746

Query: 3190 KSLKRENDDLQQKLKSVIEEREK-----LEKEVNDLTQQIKSLKNEIEEQKEKSKKEIEN 3244
              L     +   KL  V+++  K      ++  N+L+  IK +++ +E  KE+ K +   
Sbjct: 747  TKLDALAKNGGGKLGEVVQKLGKATSDDFDQGKNELSNAIKGVRDALEALKEELKDDKSP 806

Query: 3245 FSEKL 3249
               KL
Sbjct: 807  LYGKL 811




 Score = 30.4 bits (67), Expect = 2.8,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 33/74 (44%)

Query: 3455 LNNELKQENEEISKKLKSLNEQIKEITNENNQDQIDLLNKKLNENETFTRKLNDDKENLA 3514
            +   L + NEE++ K+K + + I  +  +    Q  L  KK    E    KL + KE L 
Sbjct: 660  MRETLGKVNEEVALKVKEVLQAIGNVVVQLGNAQEALEGKKKEAIEGVKAKLQEAKEGLD 719

Query: 3515 KKLQISNEENKKLN 3528
            K      E  KK+N
Sbjct: 720  KARTALEEAAKKVN 733




 Score = 29.3 bits (64), Expect = 6.6,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 11/132 (8%)

Query: 3918 EELENARNESVSNDSYLKINEEVEKNLQTALESLQNAKDENERLTKKLQKTERENKSLKQ 3977
            E     R E V  ++  K+NEEV   ++  L+++ N   +   L    +  E + K   +
Sbjct: 649  EHDRKGRVEKVMRETLGKVNEEVALKVKEVLQAIGNVVVQ---LGNAQEALEGKKKEAIE 705

Query: 3978 IIKSSEDLKSSEFEEEIDNLKTEVKKLRKEKKS---FTNVASKMEKKIDKLTKTVTGVV- 4033
             +K+    K  E +E +D  +T +++  K+        N  +K + K+D L K   G + 
Sbjct: 706  GVKA----KLQEAKEGLDKARTALEEAAKKVNGDGLSGNELTKAKTKLDALAKNGGGKLG 761

Query: 4034 EIVNKYSDSSEN 4045
            E+V K   ++ +
Sbjct: 762  EVVQKLGKATSD 773



>EAY10879.1 on XP_001610721  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1331

 Score = 32.7 bits (73), Expect = 0.60,   Method: Composition-based stats.
 Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 31/176 (17%)

Query: 1856 IKELENKLNELENSLRNKGDLQVQLNDREKELNNLKK----------------------- 1892
            IKE +     L+  L   G++ VQL + ++ L   KK                       
Sbjct: 670  IKESDKLAGGLKTLLEKIGEVVVQLGNAQEALEGKKKDAIEGVKKALEKAKKALESARTG 729

Query: 1893 ----VNENLVKQVEDLQVNKEQSDKKLSENDEELTNLRRNNADLKKQNEKLRENKEKNES 1948
                V + L  Q E      +++ +KL++    L  L +N  D     +++  + ++ E 
Sbjct: 730  LEAAVKDGLNGQAE--LTKAKEALEKLTKGGGALDILVKNGNDAGSL-QQISNSGQEWEK 786

Query: 1949 EIISLQNRLSELTNSHNDELFTVKRKLEENNSIVKQQNAKIEMLK-QQLIDQNKTI 2003
            +  S ++R+SE  +   D L  +K +L++ NS++K   A     K QQ IDQ K I
Sbjct: 787  DYSSAKDRISEAISKVRDALEALKNELKDKNSMLKGGLADWATAKFQQAIDQIKDI 842



>EAY10879.1 on XP_001610568  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1329

 Score = 32.0 bits (71), Expect = 0.82,   Method: Composition-based stats.
 Identities = 48/224 (21%), Positives = 88/224 (39%), Gaps = 11/224 (4%)

Query: 3143 KQEIEEMKAKLNSQLTEEIQTIKGEKEDLLEKIKSINKERDELSQQIKSLKREN-DDLQQ 3201
            K+ + E++  LN     +   + G  +D+LEKI  +  +     + ++  K E  + +++
Sbjct: 647  KKRVGELEKILNGVPKGKSGDLPGALKDVLEKIGEVVVQLGNAQEALEGKKTEAIEGVKK 706

Query: 3202 KLKSVIEEREKLEKEVNDLTQQIKSLKNEIEEQKEKSKKEIENFSEKLKSSNEEKQKLQN 3261
            KL+    E  K + E+         L  ++ E K+K     +     +    E      N
Sbjct: 707  KLEGAKTELGKAKGELETAVNGKDGLNGKLAEAKKKLVALTKGGGSGILKELEGALGAAN 766

Query: 3262 QNDDLQQKLESIKEERENLKRENDLINKKLKSQSEELQKLNKEIDYSKSQIDSLDEVNKK 3321
             N D  Q    I E    ++   + + K +K        + KE+D  K    +L  +   
Sbjct: 767  SN-DFDQGKNKISEAINGVRDALEALEKGVKDL------IKKEVDNDKF---ALGVIFDP 816

Query: 3322 LNSTNEQENKQLNDQINKLTTKVNDLNNEIKKLTSEKNDLIDQN 3365
               TNE EN        + TT +N +NN +    S K    D++
Sbjct: 817  AVVTNEVENVIQQGVSQEYTTLLNAINNLLSICNSPKCSACDKH 860



>EAY10879.1 on XP_001610196  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1330

 Score = 31.2 bits (69), Expect = 1.5,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 69/160 (43%), Gaps = 14/160 (8%)

Query: 2930 ENEKITKQNEEIKSQNKKLKEENDDKNREIKKLSNTLQKGDIEMNTLKDLLQTKEEKIRN 2989
            E+++  +  E     NK     N    ++IK +   + +  +++   ++ L+ KE+    
Sbjct: 661  EHDRKKRVGEMGNKLNKLPLGSNGSDAKKIKDVLEAIGQVVVQLGNAQEALEGKEK---- 716

Query: 2990 YEDILEKTKTQMEDKNYEFSKTVKDQNDKINQLEKELEQRDLELDDLTNK---SKSFDDE 3046
              + +E  K  +     E  K VK+  +      KELE+   +L++LT K   +     E
Sbjct: 717  --EAIEGVKVALGTAKTELDKAVKNGLNG-----KELEEAKKKLEELTTKGGGNNGILGE 769

Query: 3047 KNDKIQSLTTENKNLKKENRTLKGIINSVKKSSNELEERI 3086
              DK+   T  N +  +    +   I+ V++   E+++ +
Sbjct: 770  VVDKLGEATNGNNDFDQGKNKISAAIDKVREILGEIQKEL 809




 Score = 29.3 bits (64), Expect = 6.6,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 77/183 (42%), Gaps = 28/183 (15%)

Query: 3317 EVNKKLNS----TNEQENKQLNDQINKLTTKVNDLNNEIKKLTSEKNDLIDQNK------ 3366
            E+  KLN     +N  + K++ D +  +   V  L N  + L  ++ + I+  K      
Sbjct: 670  EMGNKLNKLPLGSNGSDAKKIKDVLEAIGQVVVQLGNAQEALEGKEKEAIEGVKVALGTA 729

Query: 3367 --RLNEDLSKKVN--QFDEETQKLNEQLKRSKEE---INDINNQNKKLDSLNNDLKQENN 3419
               L++ +   +N  + +E  +KL E   +       + ++ ++  +  + NND  Q  N
Sbjct: 730  KTELDKAVKNGLNGKELEEAKKKLEELTTKGGGNNGILGEVVDKLGEATNGNNDFDQGKN 789

Query: 3420 KLNHEITKLNSLTNEFNEQKKKFDSVKEENLRLNSLNNELKQENEEISKKLKSLNEQIKE 3479
            K++  I K+  +  E  ++    DS          L   L   +E ++  L    +QIK+
Sbjct: 790  KISAAIDKVREILGEIQKELGVSDSTH--------LKGTL---SEWVANTLHKTIDQIKD 838

Query: 3480 ITN 3482
            I N
Sbjct: 839  ICN 841



>EAY10879.1 on XP_843643  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 516

 Score = 30.8 bits (68), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 5/58 (8%)

Query: 1806 ELEKLQTEI-----KSKSDQLNEIQNESKSQSEQIVTFQDEVKSKDEKLQTQEEQIKE 1858
            ++EKL+TE+     KS   + N+I +E K   E+I ++  EVK+ ++  Q   ++ KE
Sbjct: 396  QVEKLETELADQKDKSPESECNKISDEPKCNDEKICSWHKEVKAGEKNCQFNSKKAKE 453



>EAY10879.1 on AAY44835  MSA-1  (Invasion)  [Babesia bovis]
          Length = 270

 Score = 30.4 bits (67), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 19/106 (17%)

Query: 3240 KEIENFSEKLKSS-NEEKQKLQNQNDDLQQKLES-------IKEERENLKRENDLINKKL 3291
            K   N   KL+SS NEE +K+   ++ +  ++ +       +KE  ++LK +N   +   
Sbjct: 48   KTFYNLMIKLESSLNEELEKVHAGSEQMAYQVANTKDGLIKMKETAKSLKDDNQFTSDGF 107

Query: 3292 KSQSEELQKLNKEID---------YSKSQIDSLDEVNKKLNSTNEQ 3328
             + +EE +K++ + D         Y K +  +LDEV K+L S  E+
Sbjct: 108  VTSAEEAKKVDGDFDTLMGSVIQIYHKCK--ALDEVAKRLFSGGEE 151



>EAY10879.1 on AAY44838  MSA-1  (Invasion)  [Babesia bovis]
          Length = 266

 Score = 30.4 bits (67), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 19/106 (17%)

Query: 3240 KEIENFSEKLKSS-NEEKQKLQNQNDDLQQKLES-------IKEERENLKRENDLINKKL 3291
            K   N   KL+SS NEE +K+   ++ +  ++ +       +KE  ++LK +N   +   
Sbjct: 48   KTFYNLMIKLESSLNEELEKVHAGSEQMAYQVANTKDGLIKMKETAKSLKDDNQFTSDGF 107

Query: 3292 KSQSEELQKLNKEID---------YSKSQIDSLDEVNKKLNSTNEQ 3328
             + +EE +K++ + D         Y K +  +LDEV K+L S  E+
Sbjct: 108  VTSAEEAKKVDGDFDTLMGSVIQIYHKCK--ALDEVAKRLFSGGEE 151



>EAY10879.1 on XP_001609167  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1317

 Score = 30.8 bits (68), Expect = 2.2,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 48/94 (51%), Gaps = 15/94 (15%)

Query: 2384 KVLTKQEKIIQKLNTKVEDLTETKQTMKQTQSEELSSLEEENEQKKEELKHLKEEFLEKE 2443
            +V  K ++++QK+   V  L   ++ ++  + EE++ ++++ E  K EL   ++E     
Sbjct: 660  EVALKVKEVLQKIGEVVVQLGNAQEALEGRKGEEITKVKDKLEGAKGELVKAQKE----- 714

Query: 2444 KRLKGLEKSIQKVTE-----KITSQKEEIENLRK 2472
                 LE  +QKV +     K+ + K ++E L +
Sbjct: 715  -----LEAEVQKVNKGGLNGKLGAAKNKLEELTR 743




 Score = 29.3 bits (64), Expect = 6.3,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 77/167 (46%), Gaps = 10/167 (5%)

Query: 3110 EISKLQKEIDERE-EKIKSQNEKLSNCRKEVEKTKQEIEEMKAKLNSQLTEEIQTIKGEK 3168
            ++   Q+ ++ R+ E+I    +KL   + E+ K ++E+E    K+N      +    G  
Sbjct: 678  QLGNAQEALEGRKGEEITKVKDKLEGAKGELVKAQKELEAEVQKVNKG---GLNGKLGAA 734

Query: 3169 EDLLEKIKSINKERDELSQQIKSLKRENDDLQQKLKSVIEEREKLEKEVNDLTQQIKSLK 3228
            ++ LE++    +   +L + ++ L  + D  + K+       E + K    LT   +  +
Sbjct: 735  KNKLEELTRNGRSNGKLGEVVQKLGGDADPGKNKIS------EAINKVYEVLTLLKEWSE 788

Query: 3229 NEIEEQKEKSKKEIENFSEKLKSSNEEKQKLQNQNDDLQQKLESIKE 3275
            +E  E K+ +K+ + +F+  L  +  E    Q  + +    L++I++
Sbjct: 789  SEGNEMKQGAKEVLSDFAAGLDDNYIEDILQQGVSHEYTTLLDAIEK 835



>EAY10879.1 on XP_804892   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1046

 Score = 30.4 bits (67), Expect = 2.7,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 55/118 (46%), Gaps = 18/118 (15%)

Query: 3625 LKNENLELKSLTSDLQLSLHSSQSEKEKIEKQNDENLRDLQKAKS-DISDLTKLLKNNSP 3683
            L ++N++L       Q +      EKE +++ +D   +DLQ A+S + +D+    ++N  
Sbjct: 794  LPDDNIQLSGGEKSQQFT---PTGEKESMQRDSDAQTQDLQSAESTEFNDVEMSSESNDT 850

Query: 3684 QASIDNRRKFQISQTNTTDIAAVSGTFSVMEDPISEEIE---------QLKDENNKMK 3732
            + +++       S   T+ +A  S       DP +E ++         +L  ENN+++
Sbjct: 851  EQTVEEGEANDKSGGTTSSVAVSSDM-----DPTTETVDGEHQVQQSVELSSENNEVR 903



>EAY10879.1 on XP_001349513  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2858

 Score = 29.6 bits (65), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 24/52 (46%)

Query: 641  LKDKINDLQNNLQKILQENENHSKQISTHIDGLSQSIKERDDQILKDKEKIE 692
            LKDK  D   +     QE ENH K     + G     K++ ++   DKEK E
Sbjct: 1497 LKDKCPDYTCSFDTKKQECENHCKVYEEWLKGWKDQYKKQSEKFTTDKEKPE 1548



>EAY10879.1 on XP_001349434  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2109

 Score = 29.3 bits (64), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 69/296 (23%), Positives = 119/296 (40%), Gaps = 55/296 (18%)

Query: 3324 STNEQENKQLNDQINKLTTKVNDLNNEIKKLTSEKNDLIDQNKRLNEDLSKKVNQFDEET 3383
            + N Q NK      +   +  ++    I        D + Q  R  E+ ++         
Sbjct: 266  TCNAQGNKYFRPTCSGGESIAHNKCTCINGDPPTYFDYVPQYLRWFEEWAEDF------C 319

Query: 3384 QKLNEQLKRSKEEINDINNQNKKLDSLNNDLKQ------------ENNKLNHEITKLNSL 3431
            +K   +L+ +KE+    N ++K  D    D K+            + NK ++      + 
Sbjct: 320  RKRKHKLQNAKEQCRGKNGEDKYCDLNGYDCKRTISAEKKLFPDSDCNKCSYSCIPFRTW 379

Query: 3432 TN----EFNEQKKKFDSVKEEN------LRLNSLNN--------ELKQENEEISKKLKSL 3473
             +    EF +QK K+D  KE+N       R   +NN        +LKQ+   +   L+ L
Sbjct: 380  IDNQKLEFLKQKNKYDKEKEKNNDTTKTTRYGPINNLYAKDFYDKLKQQYITVDSFLELL 439

Query: 3474 NEQIKEITN-----ENNQDQIDLLNKKLNENETFTRKLNDDKENLAKKLQISNEEN---K 3525
            N++ KE  N     +  +  +D  NK  N +ETF+R    +         I  +E+   K
Sbjct: 440  NKE-KECKNHPEVGDGKKTFVDFSNK--NVDETFSRT---EICEPCPWCGIEKQEDGKWK 493

Query: 3526 KLNKKVEDLSEELEESKQREENSLIDLQNKNETLENLKTQIKKQKQQIQEINRENN 3581
            +LN+   +  +E+E++      + I +     T E  KT I  QK +I   N ENN
Sbjct: 494  RLNENAPECPQEIEKTYPESNTTDIPVL----TPEKGKTSI-LQKYRIFCQNAENN 544



>EAY10879.1 on XP_804625   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1042

 Score = 28.9 bits (63), Expect = 8.4,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 55/114 (48%), Gaps = 10/114 (8%)

Query: 3625 LKNENLELKSLTSDLQLSLHSSQSEKEKIEKQNDENLRDLQKAKS-DISDLTKLLKNNSP 3683
            L +EN++L       Q +      EKE +++ +D   +DLQ A+S + +D+    ++N  
Sbjct: 790  LPDENIQLSGGEKSPQFT---PTGEKESMQRGSDLQTQDLQSAESTEFNDVEGSSESNDT 846

Query: 3684 QASIDNRRKFQISQTNTTDIAAVSGTFSVM-----EDPISEEIEQLKDENNKMK 3732
            + +++     + S   T+ +A  S   +V      E  + + +E L  ENN ++
Sbjct: 847  EQTVEEGEANEKSGGTTSSVAVSSDIDAVAAPADGEHQVQQSVE-LFSENNDVR 899



>EAY10879.1 on XP_001608670  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1320

 Score = 28.9 bits (63), Expect = 8.7,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 68/153 (44%), Gaps = 20/153 (13%)

Query: 3290 KLKSQSEELQKLNKEIDYSKSQIDSLDEVNKKLNSTNEQENKQLNDQINKLTTKVNDL-- 3347
            +L +  E L+  +KE    K  I  L+E   KL +   +   +LN ++ + T K+ +L  
Sbjct: 701  QLGNAQEALEGKDKE--GIKGVIKKLEEAKGKLETELTKVKDRLNGKLQEATKKLGELTK 758

Query: 3348 ------NNEIKKLTSEKNDLIDQNKRLNEDLSKKVNQFDEETQKLNEQLKRSKEEINDIN 3401
                  +  I  +T   +D +D  K  ++D  +  N+  E   K+ E LK  ++E+   N
Sbjct: 759  GSGGKESGSIASVTG--SDGLD--KAASDDFDQGKNRISEVIHKVREALKEIQKELGVSN 814

Query: 3402 NQNKKLDSLNNDLKQ-ENNKLNHEITKLNSLTN 3433
            +       LN  L +   N L+  I ++  + N
Sbjct: 815  SS-----YLNGSLSEWVANTLHKTIDQIKDICN 842



>EAY10879.1 on XP_001609034  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1313

 Score = 28.9 bits (63), Expect = 9.1,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 59/127 (46%), Gaps = 22/127 (17%)

Query: 2539 KIQKLNDQISDKEDDLKSKEILLEKLQKKVQETEEKFSETQK-LNKTMKDE--------- 2588
            ++ K+ D +   +DD K+    L++L +++ +   +    Q+ L K + +E         
Sbjct: 644  RVGKVGDLLKGVKDDPKTLPGALKELLQRIGDVVVQLGNAQEALEKDINNEKVAVAAVKK 703

Query: 2589 ------NANISNQLRALQMELNSKTKQIEKLVKDNTN------LKEKVTILEFKQSNFDD 2636
                  ++++S  LR +  ++N K K++EK+V +  +      L +  T LE  +    +
Sbjct: 704  AGVKNGSSDLSGVLREVLDKVNEKVKELEKVVTEKADGETSQALSKAKTALERAKEMVKN 763

Query: 2637 DNKEKEE 2643
            D  +K +
Sbjct: 764  DGNKKNK 770



>EAY10879.1 on XP_001610713  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1294

 Score = 28.5 bits (62), Expect = 9.9,   Method: Composition-based stats.
 Identities = 41/173 (23%), Positives = 74/173 (42%), Gaps = 23/173 (13%)

Query: 3135 CRKEVEKTKQEIEEMKAKLNSQLTEEIQTIKGEKEDLLEKIKSINKERDELSQQIKSLKR 3194
            C       K+ + EM  KLN       +++  + + LLEKI  +          +  L  
Sbjct: 610  CSPMEHDRKKRVAEMGNKLNKLPLGSGESVAMKVKTLLEKIGEV----------VVQLGN 659

Query: 3195 ENDDLQQKLKSVIEEREKLEKEVNDLTQQIKSLKNEIEEQKEKSKKEIENFSEKLKSSNE 3254
              + L+ K K  I   E ++  + +  ++++  KN +  + E++K   +   +KL+ +  
Sbjct: 660  AQEALEGKKKEAI---EGVKGALGEAKRELEGAKNGLNGKLEEAK---DGLKDKLQDAMT 713

Query: 3255 EKQKLQNQNDDLQQKLESIKEERENLKRENDL-INK------KLKSQSEELQK 3300
            +  +L N    L   L S   E+   K E D   NK      K++S  EE+QK
Sbjct: 714  KLGELTNGGGILVDLLGSNGLEKAAEKGEYDPGKNKISEAIHKVRSVMEEIQK 766




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10884.1 hypothetical protein TVAG_012500 [Trichomonas
vaginalis G3]
         (604 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_806929   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   1.0  

>EAY10884.1 on XP_806929   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 753

 Score = 28.9 bits (63), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 5/57 (8%)

Query: 229 DSVLYAIINNLSYSINYLIDNDYFDVNQRDSTGLSALALSSICENTSLIKKLLSKNA 285
           D + +   +NL YS     D +   + QR+    SAL+LS + E  S IK +LS  A
Sbjct: 430 DGMNWLFTSNLQYS-----DGNLHLLQQREKDKGSALSLSRLTEELSTIKSVLSTWA 481




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10889.1 surface antigen BspA-like [Trichomonas
vaginalis G3]
         (650 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_828105  VSG  (Establishment)  [Trypanosoma brucei]                  28   2.4  
XP_001349740  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   6.2  

>EAY10889.1 on XP_828105  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 508

 Score = 27.7 bits (60), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 12/28 (42%), Positives = 17/28 (60%)

Query: 47  SFIQTNNSITYIGEYAFSGCTSLTNFTI 74
           S + T++S TYIGEY  +GC    N  +
Sbjct: 300 SIMHTSSSGTYIGEYLATGCNGEDNGVV 327



>EAY10889.1 on XP_001349740  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3346

 Score = 26.6 bits (57), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)

Query: 538 RFGQNIFYGIENQMNIFITGNFNISSDSDEIIPKRSHLFITN 579
           RF ++  YG     N++I GN N S+ +  + P+R H+   N
Sbjct: 106 RFSESQEYGC---SNVYIKGNENNSNGTACVPPRRRHICDQN 144




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10902.1 LIM domain containing protein [Trichomonas
vaginalis G3]
         (608 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_820663   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.51 
XP_821909   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   2.4  
XP_001350796  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   2.6  
XP_001349512  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   4.7  
XP_804820   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   6.3  
XP_818480   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   6.6  
XP_650156  CP1  (Cysteine protease)  [Entamoeba histolytica]           26   7.1  

>EAY10902.1 on XP_820663   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 928

 Score = 30.0 bits (66), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 9/54 (16%)

Query: 117 SPPQTPTNLLDGEFTNAPI---------YDNTSILPTSFDDTEVYKPLPKQEEF 161
           +PPQ   + LD   TNAPI          D T +  +S  + E  + + +QEE 
Sbjct: 824 TPPQASVDTLDKADTNAPIATDVAQVDPADTTEVGASSGANGETAEGMDRQEEL 877



>EAY10902.1 on XP_821909   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 954

 Score = 27.7 bits (60), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 34/90 (37%), Gaps = 17/90 (18%)

Query: 96  DANNNANEDN--------GIVKMDSDMLLSPPQTPTNLLDGEFTNAPIYD---------N 138
           D N N N D+        G V  D+      PQ P  + D    N P  +         N
Sbjct: 820 DGNKNVNVDSSSDGNPAVGTVGGDTTQGNESPQIPVGISDTADANTPATEGEGQYGPTVN 879

Query: 139 TSILPTSFDDTEVYKPLPKQEEFKQPKMRE 168
                +S ++ E+ +    QEE  QP+ RE
Sbjct: 880 PEAGVSSGENGELTEGTDGQEEEVQPQERE 909



>EAY10902.1 on XP_001350796  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2646

 Score = 27.7 bits (60), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 8/70 (11%)

Query: 505 GKFYHT-HCFICRVCGCRLQPPLAKSFHERPHC--KECY---DYRKSIEMNNIHKHIPEK 558
           G FY++ +C IC  CG R      K  +E   C  K+ Y   DY +S ++N +     ++
Sbjct: 473 GTFYYSKYCEICPECGVRKGTFEEKPKNESGECDGKKLYTITDYAESTDINVL--SFGDE 530

Query: 559 SQQLKQKVSE 568
             Q+K+K+ E
Sbjct: 531 RDQIKKKIDE 540



>EAY10902.1 on XP_001349512  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2980

 Score = 26.9 bits (58), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 12/38 (31%), Positives = 17/38 (44%)

Query: 500  KVKFNGKFYHTHCFICRVCGCRLQPPLAKSFHERPHCK 537
            K+K+NGK+Y   C      G    PP  +  +  P  K
Sbjct: 1733 KLKYNGKYYGWKCISGATTGGLCIPPRRRKLYVTPLTK 1770



>EAY10902.1 on XP_804820   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 954

 Score = 26.2 bits (56), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 9/82 (10%)

Query: 96  DANNNANEDNGIVKMDSDMLLSPPQTPTNLLDGEFTNAP-----IYDNTSILP----TSF 146
           D+++N N   G V  D+      PQTP    D   T AP       D  ++ P    +S 
Sbjct: 829 DSSSNGNPAVGTVGRDTTQGNGSPQTPVGNPDAAATKAPNAETMGQDGPTVTPEAGASSG 888

Query: 147 DDTEVYKPLPKQEEFKQPKMRE 168
           ++ E  +    QEE   P+  E
Sbjct: 889 ENGEPTEETNGQEEEIHPQESE 910



>EAY10902.1 on XP_818480   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 926

 Score = 26.2 bits (56), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 3/36 (8%)

Query: 117 SPPQTPTNLLDGEFTNAPIY-DNTSILPTSFDDTEV 151
           +PPQTP +  D    NAPI  D   + P   D TEV
Sbjct: 822 TPPQTPVDTPDKAVANAPIATDVAQVDPA--DTTEV 855



>EAY10902.1 on XP_650156  CP1  (Cysteine protease)  [Entamoeba histolytica]
          Length = 315

 Score = 25.8 bits (55), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)

Query: 21  NAVGDNSDEYY--SDSESKSDKKALIKRKRSDKKKKSSLIEIKPKDYQG 67
           N +   SD  Y  SDS  +SD KA  K K  ++  +++ +E+K    QG
Sbjct: 176 NGIAKESDYPYTGSDSTCRSDVKAFAKIKSYNRVARNNEVELKAAISQG 224




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10905.1 hypothetical protein TVAG_259900 [Trichomonas
vaginalis G3]
         (171 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_966151  TLP  (Invasion)  [Plasmodium falciparum]                    27   0.71 

>EAY10905.1 on XP_966151  TLP  (Invasion)  [Plasmodium falciparum]
          Length = 1371

 Score = 26.9 bits (58), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 12/29 (41%), Positives = 16/29 (55%)

Query: 39   YMRKHYQTGNLTEQDVVTVTPSSRYDTGD 67
            +++  Y  GNLTE + VT   S  YD  D
Sbjct: 1261 HIKNQYDKGNLTENNEVTPIYSKDYDADD 1289




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10911.1 hypothetical protein TVAG_259960 [Trichomonas
vaginalis G3]
         (77 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAP74702  TbVSP1  (Others)  [Trypanosoma brucei]                       26   0.27 
AAF14193  SBP3  (Others)  [Babesia bovis]                              24   1.1  
XP_001350936  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   2.9  
XP_656181  Hgl2  (Adhesin)  [Entamoeba histolytica]                    23   3.0  
XP_001351321  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   3.4  

>EAY10911.1 on AAP74702  TbVSP1  (Others)  [Trypanosoma brucei]
          Length = 413

 Score = 25.8 bits (55), Expect = 0.27,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%)

Query: 7   QSDIEDELREAFRVFDRDTDGFITPNELRSLLISLGLDSSAEVVRRMINEADKNRDGKID 66
           Q  I+  +   F  FD    G++TP+++  +   LG + S   V+ M  E +   DG + 
Sbjct: 74  QPMIKKIMSRLFSAFDVTHLGYLTPDKVEEVCRYLGRNMSDGDVKAMKAEINA-IDGHVT 132

Query: 67  YAEFRA 72
           + +F A
Sbjct: 133 FEKFWA 138



>EAY10911.1 on AAF14193  SBP3  (Others)  [Babesia bovis]
          Length = 1089

 Score = 24.3 bits (51), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/20 (55%), Positives = 12/20 (60%), Gaps = 1/20 (5%)

Query: 13  ELREAF-RVFDRDTDGFITP 31
           E  E F R+ DR  DGF TP
Sbjct: 253 ETEEGFTRISDRQRDGFFTP 272



>EAY10911.1 on XP_001350936  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2163

 Score = 22.7 bits (47), Expect = 2.9,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 7/40 (17%)

Query: 28   FITPNELRSLLISLGLDSSAEVVRRMINEADKNR-DGKID 66
            FIT  +++ +      DSS+E V  ++++ D N+ DG +D
Sbjct: 1388 FITAEDIKIM------DSSSEEVNMLVSDNDTNKFDGGLD 1421



>EAY10911.1 on XP_656181  Hgl2  (Adhesin)  [Entamoeba histolytica]
          Length = 1286

 Score = 22.7 bits (47), Expect = 3.0,   Method: Composition-based stats.
 Identities = 7/19 (36%), Positives = 14/19 (73%)

Query: 58  DKNRDGKIDYAEFRALALG 76
           ++N+D KI Y+  + ++LG
Sbjct: 340 NRNKDSKITYSALKLVSLG 358



>EAY10911.1 on XP_001351321  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3467

 Score = 22.7 bits (47), Expect = 3.4,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 1    MSRQMRQSDIEDELREAFRVFDRDTDGFITPNELRSLL--ISLGLDSSAEVVRRMINEAD 58
            M  +  + + E+ L +    +++D DG   P++ RSL   +S+ +D      ++  +  D
Sbjct: 3324 MCEKWEKHNKEELLDKLNEQWNKDNDGINVPSDNRSLNTDVSIQIDMDENKGKKEFSNMD 3383

Query: 59   KNRD 62
             N D
Sbjct: 3384 TNVD 3387




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10913.1 surface antigen BspA-like [Trichomonas
vaginalis G3]
         (172 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10915.1 hypothetical protein TVAG_260000 [Trichomonas
vaginalis G3]
         (1259 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001350415  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   8.7  
ABA06442  MSA-2a/b  (Invasion)  [Babesia bovis]                        27   9.7  

>EAY10915.1 on XP_001350415  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3056

 Score = 26.9 bits (58), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 4/91 (4%)

Query: 795 EAAKTNRETFIRDLCRAVHCDEPKETKILETIKNLTQKLANAEEG--QQSIATVLGALTS 852
           EA + N E  +  L     CD+ K  +  +  KN   K ++ +EG  Q+  A  +G    
Sbjct: 524 EACEKNLEKVLASLTNCYKCDKCKSEQSKKNNKNWIWKKSSGKEGGLQKEYANTIGLPPR 583

Query: 853 GDQKQIVSQITQLQAKERSLENLKT--ELLK 881
                +V  + +   K + L+N++T  ELLK
Sbjct: 584 TQSLCLVVCLDEKGKKTQELKNIRTNSELLK 614



>EAY10915.1 on ABA06442  MSA-2a/b  (Invasion)  [Babesia bovis]
          Length = 267

 Score = 26.6 bits (57), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 42/100 (42%), Gaps = 4/100 (4%)

Query: 537 DVKSLVDTKNAAVEQLKSVNKEMKAAKTKYEQFMHDVLKLPVYSSPPTSISLAKEITSAL 596
           D  SLV   N  ++      +  KA  T YE+ +  +   P  SSP  S S     T   
Sbjct: 165 DYNSLVKFCNDFLDSKSPFMRIYKALNT-YEELVEKMPGKP--SSPTHSSSQGTTTTRPA 221

Query: 597 SAASEKVSNLQKEKDDLNSENEKKKSIFNSLQGIIGTTLA 636
           + +  +     K + +LN +NE  KS F S  G+   TL 
Sbjct: 222 APSPSQADQPTKPEGNLNGQNEPAKSSF-SYGGLTVATLC 260




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10920.1 STE family protein kinase [Trichomonas
vaginalis G3]
         (452 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    42   3e-05

>EAY10920.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 42.4 bits (98), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/195 (20%), Positives = 76/195 (38%), Gaps = 37/195 (18%)

Query: 117 QILQFLQYWHEKHQIHRDLRPETILVSNDGHVKVGAIGSTTSLIMRGHRAKARYSNTYNG 176
           Q+L+ + Y H +  +HRD++P  +++ ++  +                    R +  Y  
Sbjct: 155 QLLKAMNYCHSQGIMHRDIKPHNVMIDHEKKILRLIDWGLAEFYHPEQEYSVRVATRY-- 212

Query: 177 PAAYAPPEVSLHNGYTEKA-DIWSFGITIYELATGHHPY----------------CGTDE 219
              Y  PE+ +   Y + + DIWS G  +  +     P+                 GT++
Sbjct: 213 ---YKGPELLVDMRYYDYSLDIWSIGCMLAGIIFKKEPFFYGHDNYDQLVKIAKVLGTED 269

Query: 220 MN------------VTKEIL---SKTPETSFLKSDQNPTYSSKFIDFLKQCLNTDQKKRL 264
           ++              +EIL   SK P T F+  +     S + +D L + L  D  KR+
Sbjct: 270 LHRYFEKYGLKFAPAYQEILGNHSKKPWTKFVHHENQHLVSPEVMDLLDRMLVYDHTKRI 329

Query: 265 SAKDLLKSSFIKESK 279
           +  + ++  F  E K
Sbjct: 330 TPLEAMEHPFFNEIK 344




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10922.1 Signal recognition particle 14kD protein
[Trichomonas vaginalis G3]
         (110 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609935  variant erythrocyte surface antigen-1, alpha subun...    23   7.8  
XP_001610567  variant erythrocyte surface antigen-1, alpha subun...    23   8.3  
XP_001609033  variant erythrocyte surface antigen-1, alpha subun...    22   9.8  

>EAY10922.1 on XP_001609935  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1317

 Score = 22.7 bits (47), Expect = 7.8,   Method: Composition-based stats.
 Identities = 7/11 (63%), Positives = 10/11 (90%)

Query: 26  ITYKHFTGKYS 36
           +TY H+TGKY+
Sbjct: 312 VTYMHWTGKYA 322



>EAY10922.1 on XP_001610567  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1315

 Score = 22.7 bits (47), Expect = 8.3,   Method: Composition-based stats.
 Identities = 7/11 (63%), Positives = 10/11 (90%)

Query: 26  ITYKHFTGKYS 36
           +TY H+TGKY+
Sbjct: 308 VTYMHWTGKYA 318



>EAY10922.1 on XP_001609033  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1270

 Score = 22.3 bits (46), Expect = 9.8,   Method: Composition-based stats.
 Identities = 8/15 (53%), Positives = 10/15 (66%)

Query: 26  ITYKHFTGKYSVKKS 40
           +TY H+TGKY    S
Sbjct: 258 VTYMHWTGKYHSSSS 272




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10934.1 ankyrin repeat protein, putative [Trichomonas
vaginalis G3]
         (436 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_816177   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   4.9  
XP_820773   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   5.6  

>EAY10934.1 on XP_816177   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 779

 Score = 26.2 bits (56), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 14/37 (37%), Positives = 18/37 (48%)

Query: 212 AKDNDGYTPLIYASYYGKLEVVKYLISDGANKEAKDN 248
           AK ND   P++    Y K    + L SDG  KE + N
Sbjct: 602 AKTNDNKNPVLLGLSYDKEGKWQVLCSDGTTKELRSN 638



>EAY10934.1 on XP_820773   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 779

 Score = 25.8 bits (55), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 14/37 (37%), Positives = 18/37 (48%)

Query: 212 AKDNDGYTPLIYASYYGKLEVVKYLISDGANKEAKDN 248
           AK ND   P++    Y K    + L SDG  KE + N
Sbjct: 602 AKTNDNKNPVLLGLSYDKEGKWQVLCSDGTTKELRSN 638




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10935.1 WW domain containing protein [Trichomonas
vaginalis G3]
         (816 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_657460  Lgl5  (Adhesin)  [Entamoeba histolytica]                    31   0.27 
XP_001348176  PfEMP1  (Establishment)  [Plasmodium falciparum]         30   0.91 
XP_001352170  MSP1  (Invasion)  [Plasmodium falciparum]                29   1.2  
CAA70921  MIC5  (Others)  [Toxoplasma gondii]                          28   1.7  

>EAY10935.1 on XP_657460  Lgl5  (Adhesin)  [Entamoeba histolytica]
          Length = 270

 Score = 30.8 bits (68), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 12/131 (9%)

Query: 214 ELQEQHQRELDNEKNKLREKFNNDV--QQEKKFY-NDELQKIKDNNQRSLTEAQKSILDQ 270
           +L E++   +DN   K    F +DV   Q +KF  +      ++N  R+  +    ++  
Sbjct: 21  QLSEKYPYGMDNRNTKFDHDFTSDVNSYQIQKFAESGVFSANQENYVRAKCKTCCRVIFA 80

Query: 271 QKNTFENQKKFLED----SNNRELEDIKNKHKREIDFITSSFEQ-----EKKIANDSKAL 321
               +E QK+F  D       R + D++   KR + F   ++EQ       K+ N+ +  
Sbjct: 81  SDYNYETQKQFTTDDDVKGTTRYVMDMEFDDKRSVRFYQGNYEQNILLRPLKMGNELQFF 140

Query: 322 EITNLKKSHEF 332
           E    K    F
Sbjct: 141 EFAPYKMYTSF 151



>EAY10935.1 on XP_001348176  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3119

 Score = 29.6 bits (65), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 10/77 (12%)

Query: 440  KEFIEFKSAQQQKLIAAKRKYTDSSEIMEMQNNFEQKKKEFENQQKEEINSINEEHQREI 499
            K FI  + +  QK     +K+     I+  +N F ++KK+FEN    EI ++N  ++ + 
Sbjct: 2191 KSFIYLQCSGCQKECIKYKKW-----IVNKRNEFNKQKKKFEN----EIKTVNGTNEDKY 2241

Query: 500  DDMKKKHAKLIQ-LLND 515
            D+   K+ KL+  L ND
Sbjct: 2242 DEEVYKNPKLMYPLFND 2258



>EAY10935.1 on XP_001352170  MSP1  (Invasion)  [Plasmodium falciparum]
          Length = 1720

 Score = 29.3 bits (64), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 7/69 (10%)

Query: 48  LQTKLPPEWKIYQKKDGSSRSFYFNTKTGESIWE-HPLDEKFKQKYLDEKKKYLEKQKGT 106
           +Q  +P  + +Y   +   +  +F     E I+  H L E+      +  KK LE+QK  
Sbjct: 854 IQNNIPAMYSLYDSMNNDLQHLFFELYQKEMIYYLHKLKEE------NHIKKLLEEQKQI 907

Query: 107 SNTSQTSTP 115
           + TS TS+P
Sbjct: 908 TGTSSTSSP 916



>EAY10935.1 on CAA70921  MIC5  (Others)  [Toxoplasma gondii]
          Length = 231

 Score = 28.1 bits (61), Expect = 1.7,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 57/123 (46%), Gaps = 5/123 (4%)

Query: 638 SQQMLGANHSMFNPQVPRFSMLDDGYSEKIKKGHSKVNKFEDQFNTTCDSLENGIRDSNN 697
           S+ M  A+    +P  P  S + + + E+IK+G  +    +D   T     E     + +
Sbjct: 113 SEPMEAADRQAEHPGAPTQSEMKE-FQEEIKEGVEETKHEDDPEMTRLMVTEKQESKNFS 171

Query: 698 KVSQLTNSYRTFIQDQNKSLSQLALDFQQQTTQISLNMHSTILDMQNTLNNALATINARN 757
           K+++ + S+ T I++   S+S L    +   T I L    +  DM   L++ LA + +  
Sbjct: 172 KMAK-SQSFSTRIEELGGSISFLT---ETGVTMIELPKTVSEHDMDQLLHDILAAVESLG 227

Query: 758 STP 760
           STP
Sbjct: 228 STP 230




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10937.1 hypothetical protein TVAG_260230 [Trichomonas
vaginalis G3]
         (905 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10941.1 hypothetical protein TVAG_260270 [Trichomonas
vaginalis G3]
         (243 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_818689   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   0.25 
XP_820303   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.63 
XP_821991   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.2  
XP_802330   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   1.8  
XP_814625   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   3.0  
XP_808182   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   3.1  
XP_814156   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   3.1  
XP_807444   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   4.1  

>EAY10941.1 on XP_818689   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 844

 Score = 29.3 bits (64), Expect = 0.25,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 25/48 (52%)

Query: 194 ELKDQIPKLPDAERHKYAAAVALAFGEMLGVGDEEEEQAEEGAAAQEP 241
           E ++  P+ P+  RH + +AV L    M+      ++QA E   +QEP
Sbjct: 28  EGRESGPQRPNMSRHLFCSAVLLLLVVMMCCNAVGDQQAAEPPLSQEP 75



>EAY10941.1 on XP_820303   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 873

 Score = 27.7 bits (60), Expect = 0.63,   Method: Composition-based stats.
 Identities = 14/35 (40%), Positives = 19/35 (54%)

Query: 200 PKLPDAERHKYAAAVALAFGEMLGVGDEEEEQAEE 234
           P+ P+  RH + +AV L F  M+  G    EQA E
Sbjct: 34  PQRPNMSRHLFYSAVLLLFVVMMCCGSGVAEQAPE 68



>EAY10941.1 on XP_821991   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 882

 Score = 26.9 bits (58), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 24/47 (51%)

Query: 194 ELKDQIPKLPDAERHKYAAAVALAFGEMLGVGDEEEEQAEEGAAAQE 240
           E ++  P+ P+  R  +A+AV L    M+  G     QA+ GAA  +
Sbjct: 28  EGRESEPQRPNMSRRVFASAVLLLLVVMMCCGSGGGAQADVGAAQSQ 74



>EAY10941.1 on XP_802330   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 84

 Score = 25.0 bits (53), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 194 ELKDQIPKLPDAERHKYAAAVALAFGEMLGVGDEEEEQAEE 234
           E ++  P+ P+  RH + +AV L    M+        QA+E
Sbjct: 29  EGRESEPQRPNMSRHLFCSAVLLLLVVMMCCNTGRAAQADE 69



>EAY10941.1 on XP_814625   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 941

 Score = 25.8 bits (55), Expect = 3.0,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 3/42 (7%)

Query: 194 ELKDQIPKLPDAERHKYAAAVALAFGEML---GVGDEEEEQA 232
           E ++  P++PD  RH + +AV L    M    G   E EEQ+
Sbjct: 28  EGRESEPRMPDMSRHLFYSAVLLLVVMMCCTAGGAAEAEEQS 69



>EAY10941.1 on XP_808182   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 918

 Score = 25.8 bits (55), Expect = 3.1,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 19/43 (44%)

Query: 200 PKLPDAERHKYAAAVALAFGEMLGVGDEEEEQAEEGAAAQEPN 242
           P+ P+  R  +A+AV L    M+  G      AEE      PN
Sbjct: 34  PQRPNMSRRVFASAVLLLLVVMMCCGSGVAALAEESNPVTAPN 76



>EAY10941.1 on XP_814156   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 759

 Score = 25.8 bits (55), Expect = 3.1,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 23/49 (46%)

Query: 194 ELKDQIPKLPDAERHKYAAAVALAFGEMLGVGDEEEEQAEEGAAAQEPN 242
           E ++  P+ P+  R  + +AV L    M+  G      A+E  +  +PN
Sbjct: 28  EGRESEPQRPNMSRRVFTSAVLLLLVVMMCCGSGGAASADEKQSEADPN 76



>EAY10941.1 on XP_807444   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 777

 Score = 25.4 bits (54), Expect = 4.1,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 22/46 (47%)

Query: 194 ELKDQIPKLPDAERHKYAAAVALAFGEMLGVGDEEEEQAEEGAAAQ 239
           E ++  P+ P+  RH + +AV L    M+        QA+E  + Q
Sbjct: 29  EGRESEPQRPNMSRHLFCSAVLLLLVVMMCCNTGRAAQADEPTSDQ 74




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10942.1 F5/8 type C domain containing protein
[Trichomonas vaginalis G3]
         (142 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001350415  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   0.78 
XP_821078   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   1.2  
XP_819966   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   1.3  

>EAY10942.1 on XP_001350415  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3056

 Score = 26.2 bits (56), Expect = 0.78,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 41/100 (41%), Gaps = 6/100 (6%)

Query: 41   FSSYYQSLPQHLTLK-----FDKQYNIRRVGLYLHGENNQNPKEIEFLLGTDPKDMKVVK 95
            ++ Y++ +  +  L+      D   NI       +  N  NPK IE+  G      K+ +
Sbjct: 1805 YTKYFEDMKSNCNLRKGADDCDDNSNIECKKACANYTNWLNPKRIEWN-GMSNYYNKIYR 1863

Query: 96   HVTLEHRAGEHFFDLDQPVPAEYITVRCLENFGGSGVCIS 135
                E   G+ +  + +P   +Y+  RC     G+ +C S
Sbjct: 1864 KSNKESEDGKDYSMIMEPTVIDYLNKRCNGEINGNYICCS 1903



>EAY10942.1 on XP_821078   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 940

 Score = 25.8 bits (55), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 20/86 (23%)

Query: 41  FSSYYQSLPQHLTLKFD-KQYNIRRVGLYLHGENNQNPKEI--------EFLLGT----- 86
           F++Y  +L   +++  + K+ NI  +G+ L GE  + P E+        +FL G      
Sbjct: 565 FANYKFTLVATVSIDGELKEGNIPLLGVKLDGEGEKKPMELSYDNEKKWQFLCGGGQNKE 624

Query: 87  -----DPKDMKVVKHVTLEHRAGEHF 107
                DP+  K   HV +  R G HF
Sbjct: 625 HSRDWDPETTK-KDHVVILIRNGNHF 649



>EAY10942.1 on XP_819966   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 716

 Score = 25.4 bits (54), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 9/58 (15%)

Query: 86  TDPKDMKVV----KHVTLEHRAGEHFFD-----LDQPVPAEYITVRCLENFGGSGVCI 134
           TD KD+K++    +  T    +G   +      L QP P     ++ L  FGG+GV +
Sbjct: 209 TDGKDIKLIVGDARPSTGRRESGTFIWGDPTSLLQQPTPENQTELKKLTPFGGAGVLL 266




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10947.1 3'5'-cyclic nucleotide phosphodiesterase
family protein [Trichomonas vaginalis G3]
         (1060 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351563  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   8.4  
XP_817721   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   9.8  

>EAY10947.1 on XP_001351563  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2149

 Score = 26.9 bits (58), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 3/81 (3%)

Query: 423  KADRCSLFIVSQSRDRLITSFQRGLANSIDIPINKGIAGQTVTEKKVINIADAYSDPSFD 482
            KAD+  +  VS + D     F+RGL    +  I KGI  +     K+ N    +     +
Sbjct: 1335 KADQQVVLHVSDNSDH---KFERGLDECKEADIFKGIRKEEWECDKLCNSVVCFLKKKNE 1391

Query: 483  NTTDMETGYRTRSILSVPIIN 503
            N TD++     R++L   + N
Sbjct: 1392 NGTDLKQYIEIRALLKRWVDN 1412



>EAY10947.1 on XP_817721   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 922

 Score = 26.6 bits (57), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 1/59 (1%)

Query: 631 CVKSKEIISVTDAYSDPRFNRSVDKQTGFKTTSLLAAPIISKSG-EVLGVVEMVNKETG 688
           C  S E   V    S P+F      ++G +T   L AP + K G +V  V E   K  G
Sbjct: 57  CCGSGEAAGVAGQPSVPQFKWRGINESGGETVESLGAPSLLKVGDDVFAVAEAQCKNGG 115




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10949.1 hypothetical protein TVAG_260350 [Trichomonas
vaginalis G3]
         (627 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAX07967  alpha-10 giardin  (Others)  [Giardia duodenalis]             25   8.8  

>EAY10949.1 on AAX07967  alpha-10 giardin  (Others)  [Giardia duodenalis]
          Length = 255

 Score = 25.4 bits (54), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 11/30 (36%), Positives = 21/30 (70%), Gaps = 1/30 (3%)

Query: 431 FILTTNPDNF-YSVDFFESIARRELNDGIL 459
           +ILTTNPD + Y   ++++   R+L++ +L
Sbjct: 130 YILTTNPDEWDYITRYYQNSTGRDLSNDLL 159




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10950.1 hypothetical protein TVAG_260360 [Trichomonas
vaginalis G3]
         (81 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001349031  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   0.20 
XP_805061   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   1.4  
XP_808550   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   1.8  
XP_804569   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   1.9  
XP_807743   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   3.9  
ABA06442  MSA-2a/b  (Invasion)  [Babesia bovis]                        22   5.6  
ABA06438  MSA-2a/b  (Invasion)  [Babesia bovis]                        22   5.6  
XP_814899   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   6.2  
XP_806989   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   7.2  
XP_817389   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   8.3  

>EAY10950.1 on XP_001349031  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2275

 Score = 26.2 bits (56), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 16/54 (29%), Positives = 21/54 (38%), Gaps = 12/54 (22%)

Query: 9    IQSIHDKEV-----------AEKADNKVHEHGADPLHANHKEAQVKKAPVAHGH 51
            I SIHD+ +                N V+  G DP  ANH     K  P++  H
Sbjct: 2005 IMSIHDRNLYIGEEYSYDMSTNSGQNNVYS-GIDPTSANHDSYSDKNDPISDNH 2057



>EAY10950.1 on XP_805061   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 920

 Score = 23.9 bits (50), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 11/18 (61%), Positives = 11/18 (61%)

Query: 53  GKPAADGAKPAEGDKAAA 70
           GKPAADG    EG  A A
Sbjct: 498 GKPAADGGLTFEGSGAGA 515



>EAY10950.1 on XP_808550   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 948

 Score = 23.5 bits (49), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 33  LHANHKEAQVKKAPVAHGHSGKPAADGAKPAEGD 66
           +  + KE  V + P+     GK   D A P++GD
Sbjct: 795 ITNSEKEQSVIQLPLGISSGGKKNVDVASPSDGD 828



>EAY10950.1 on XP_804569   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 689

 Score = 23.5 bits (49), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 11/18 (61%), Positives = 11/18 (61%)

Query: 53  GKPAADGAKPAEGDKAAA 70
           GKPAADG    EG  A A
Sbjct: 242 GKPAADGGLTFEGSGAGA 259



>EAY10950.1 on XP_807743   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 931

 Score = 22.7 bits (47), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 38  KEAQVKKAPVAHGHSGKPAADGAKPAEGD 66
           KE  V + P+     G    D A P++GD
Sbjct: 782 KEQSVIRLPLGTSSGGNKNVDVASPSDGD 810



>EAY10950.1 on ABA06442  MSA-2a/b  (Invasion)  [Babesia bovis]
          Length = 267

 Score = 21.9 bits (45), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 6/44 (13%)

Query: 35  ANHKEAQVKKAPVAHGHSGKPAADGAKPAEGDKAAAPAAAKPAE 78
            N  E  V+K P      GKP++     ++G     PAA  P++
Sbjct: 190 LNTYEELVEKMP------GKPSSPTHSSSQGTTTTRPAAPSPSQ 227



>EAY10950.1 on ABA06438  MSA-2a/b  (Invasion)  [Babesia bovis]
          Length = 267

 Score = 21.9 bits (45), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 6/44 (13%)

Query: 35  ANHKEAQVKKAPVAHGHSGKPAADGAKPAEGDKAAAPAAAKPAE 78
            N  E  V+K P      GKP++     ++G     PAA  P++
Sbjct: 190 LNTYEELVEKMP------GKPSSPTHSSSQGTTTTRPAAPSPSQ 227



>EAY10950.1 on XP_814899   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 827

 Score = 21.9 bits (45), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 2/25 (8%)

Query: 55  PAADGAKPA-EGDKAAAPAAAKPAE 78
           P+A+GA P+  GDK   P A KP+E
Sbjct: 721 PSAEGASPSVSGDK-KTPPAGKPSE 744



>EAY10950.1 on XP_806989   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 922

 Score = 21.9 bits (45), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 10/18 (55%), Positives = 10/18 (55%)

Query: 53  GKPAADGAKPAEGDKAAA 70
           G PAADG    EG  A A
Sbjct: 498 GMPAADGGLTFEGSGAGA 515



>EAY10950.1 on XP_817389   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 792

 Score = 21.6 bits (44), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 9/18 (50%), Positives = 12/18 (66%)

Query: 61  KPAEGDKAAAPAAAKPAE 78
           +  EGD+ A P A KP+E
Sbjct: 691 QSVEGDQKAMPPAGKPSE 708




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10951.1 Ras-related protein, putative [Trichomonas
vaginalis G3]
         (83 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BAD34969  Rab7B  (Establishment)  [Entamoeba histolytica]              71   9e-18
XP_649196  Rab7A  (Establishment)  [Entamoeba histolytica]             70   2e-17
XP_652776  Rab11B  (Establishment)  [Entamoeba histolytica]            65   2e-15
BAB40673  Rab5  (Establishment)  [Entamoeba histolytica]               61   5e-14
AAB86482  RabA  (Invasion)  [Entamoeba histolytica]                    49   9e-10
XP_821133   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   2.3  
XP_001609566  variant erythrocyte surface antigen-1, beta subuni...    22   7.8  

>EAY10951.1 on BAD34969  Rab7B  (Establishment)  [Entamoeba histolytica]
          Length = 207

 Score = 70.9 bits (172), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 34/72 (47%), Positives = 49/72 (68%)

Query: 11 KIVLLGNSGVGKTSIINKWINGTFDYDAKPTIGADHQTKTVTIRDNTVNAFIFDTAGGEQ 70
          KI++LG+SGVGKTS++N+++   F    K TIGAD  TK +TI D  ++  I+DTAG E+
Sbjct: 12 KIIILGDSGVGKTSLLNQYVTKQFSSQYKATIGADFMTKDITINDQQISLQIWDTAGHER 71

Query: 71 FQSLTPAYIRNS 82
          F S   A+ R +
Sbjct: 72 FASFGTAFYRGA 83



>EAY10951.1 on XP_649196  Rab7A  (Establishment)  [Entamoeba histolytica]
          Length = 206

 Score = 69.7 bits (169), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 35/77 (45%), Positives = 53/77 (68%)

Query: 4  SKPLLTCKIVLLGNSGVGKTSIINKWINGTFDYDAKPTIGADHQTKTVTIRDNTVNAFIF 63
          SK  +  K+++LG+SGVGKTS++N+++N  +    K TIGAD  TK + + ++ V   I+
Sbjct: 2  SKKKILLKVIILGDSGVGKTSLMNQFVNHKYSSVYKATIGADFLTKDLVVDNHEVTMQIW 61

Query: 64 DTAGGEQFQSLTPAYIR 80
          DTAG E+FQSL  A+ R
Sbjct: 62 DTAGNERFQSLGVAFYR 78



>EAY10951.1 on XP_652776  Rab11B  (Establishment)  [Entamoeba histolytica]
          Length = 211

 Score = 64.7 bits (156), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 48/70 (68%)

Query: 11 KIVLLGNSGVGKTSIINKWINGTFDYDAKPTIGADHQTKTVTIRDNTVNAFIFDTAGGEQ 70
          KIVL+G SGVGK++++ ++    FD D + TIG +  T+++   D  + A I+DTAG E+
Sbjct: 12 KIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSINYCDKNIRAQIWDTAGQER 71

Query: 71 FQSLTPAYIR 80
          ++++T AY R
Sbjct: 72 YRAITNAYYR 81



>EAY10951.1 on BAB40673  Rab5  (Establishment)  [Entamoeba histolytica]
          Length = 195

 Score = 60.8 bits (146), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 33/72 (45%), Positives = 45/72 (62%)

Query: 11 KIVLLGNSGVGKTSIINKWINGTFDYDAKPTIGADHQTKTVTIRDNTVNAFIFDTAGGEQ 70
          KIVLLG+S VGK+SI+ +     +    + TIGA   TKT+ +   T+   I+DTAG E+
Sbjct: 10 KIVLLGDSSVGKSSIVLRVCKDEYKEFQENTIGAAFLTKTLIVDGETIKFEIWDTAGQER 69

Query: 71 FQSLTPAYIRNS 82
          + SLTP Y R S
Sbjct: 70 YHSLTPMYYRGS 81



>EAY10951.1 on AAB86482  RabA  (Invasion)  [Entamoeba histolytica]
          Length = 219

 Score = 49.3 bits (116), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 40/68 (58%)

Query: 14 LLGNSGVGKTSIINKWINGTFDYDAKPTIGADHQTKTVTIRDNTVNAFIFDTAGGEQFQS 73
          L+G+ GVGKT++I ++  GT+  D   TIG +   K+V +        ++DTAG E++ S
Sbjct: 30 LIGDVGVGKTALIQRFCFGTYTEDYDATIGIETCDKSVNLDGKMYQLQLWDTAGQEKYHS 89

Query: 74 LTPAYIRN 81
          L   Y ++
Sbjct: 90 LVRLYFKD 97



>EAY10951.1 on XP_821133   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 896

 Score = 23.5 bits (49), Expect = 2.3,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)

Query: 32  GTFDYDAKPTIGADHQTKTVTIRDNTVNAFIFDTAGGEQ 70
           G+   D +P +G D Q K  T   N ++ F     GGE+
Sbjct: 661 GSAYVDGQP-VGGDEQCKLETTGSNEISHFYIGGNGGEK 698



>EAY10951.1 on XP_001609566  variant erythrocyte surface antigen-1, beta subunit  
           (Establishment)  [Babesia bovis]
          Length = 1062

 Score = 21.9 bits (45), Expect = 7.8,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 15/25 (60%)

Query: 43  GADHQTKTVTIRDNTVNAFIFDTAG 67
           G D Q KTV+ +D+ +  F+ D  G
Sbjct: 604 GTDCQCKTVSGKDSPLMLFLCDGIG 628




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10956.1 hypothetical protein TVAG_446580 [Trichomonas
vaginalis G3]
         (663 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_954179  TashAT2  (Establishment)  [Theileria annulata]              28   2.0  
XP_954175  TashAT3  (Establishment)  [Theileria annulata]              27   6.1  
XP_001351437  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   7.8  
XP_001351438  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   8.2  
AAT29067  ROM4  (Establishment)  [Toxoplasma gondii]                   25   9.8  

>EAY10956.1 on XP_954179  TashAT2  (Establishment)  [Theileria annulata]
          Length = 1161

 Score = 28.1 bits (61), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 3/58 (5%)

Query: 112 QAKEKKKAPEK-KPEAKKPAPK-AKP-KPEPEPEEDGDDEGDEEAPVEVEMNDEDEAL 166
           Q K K+  P K KPE ++P  K  +P K +PEPE D  +E  +  P E E  D  +AL
Sbjct: 448 QPKRKRGRPRKHKPEPEQPKRKRGRPRKQKPEPESDHSEESTQPHPQEQETEDSIKAL 505



>EAY10956.1 on XP_954175  TashAT3  (Establishment)  [Theileria annulata]
          Length = 994

 Score = 26.6 bits (57), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 4/60 (6%)

Query: 108 KKMMQAKEKKKAPE-KKPEAKKPAPKAKPKPEPEPEEDGDDEGDEEAPVEVEMNDEDEAL 166
           KK    + +K  PE ++P+ K+  P+   K +PEPE D  +E  +  P E E  D  +AL
Sbjct: 431 KKTWLLRPRKHKPEPEQPKRKRGRPR---KQKPEPESDHSEESTQPHPQEQETEDSIKAL 487



>EAY10956.1 on XP_001351437  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2277

 Score = 26.2 bits (56), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 10/38 (26%)

Query: 191 LDKKDAKHSGSKEKFHKKDVAQITNYEDYFNFFAANVL 228
           L KK+ + +G K+K           Y D+FNF+ A++L
Sbjct: 657 LQKKNGEENGKKQK----------TYNDFFNFWVAHML 684



>EAY10956.1 on XP_001351438  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2312

 Score = 26.2 bits (56), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 10/38 (26%)

Query: 191 LDKKDAKHSGSKEKFHKKDVAQITNYEDYFNFFAANVL 228
           L KK+ + +G K+K           Y D+FNF+ A++L
Sbjct: 613 LQKKNGEENGKKQK----------TYNDFFNFWVAHML 640



>EAY10956.1 on AAT29067  ROM4  (Establishment)  [Toxoplasma gondii]
          Length = 255

 Score = 25.4 bits (54), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 500 VGQDLNIKAQPPKQDQPAAEPPKQAAKPAAKPASKPAA 537
           +GQD  +K   P +  P+A PP+ A  P   P   PAA
Sbjct: 32  LGQDNTLKHDTPTETAPSASPPRVAPAP-IPPKGGPAA 68




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10962.1 Psp-related protein [Trichomonas vaginalis
G3]
         (315 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]                 38   8e-04
AAL15422  MSA-2a2  (Invasion)  [Babesia bovis]                         32   0.045
XP_815479   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           32   0.049
ABR92030  MSA-1  (Invasion)  [Babesia bovis]                           32   0.056
ABR92024  MSA-1  (Invasion)  [Babesia bovis]                           31   0.092
XP_805038   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           31   0.11 
XP_810140   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.15 
XP_807541   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   0.44 
XP_817389   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   0.45 
XP_813123   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.56 
XP_811703   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.57 
XP_820186   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.60 
ABA06437  MSA-2a/b  (Invasion)  [Babesia bovis]                        28   0.61 
XP_817719   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.63 
XP_806299   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.63 
XP_807476   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.65 
XP_001349032  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   0.68 
XP_001351319  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   0.75 
XP_812613   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.77 
AAC37226  SBP1  (Others)  [Babesia bovis]                              28   0.78 
XP_807986   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.83 
XP_813188   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.95 
XP_813587   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.98 
XP_809824   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.0  
XP_818394   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.2  
XP_809960   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.5  
XP_845638  VSG  (Establishment)  [Trypanosoma brucei]                  27   1.6  
XP_804686   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.8  
XP_001349515  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   1.9  
ABA06450  MSA-2a1  (Invasion)  [Babesia bovis]                         27   1.9  
AAL15421  MSA-2a1  (Invasion)  [Babesia bovis]                         27   2.0  
XP_808156   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.0  
XP_966307  PfEMP1  (Establishment)  [Plasmodium falciparum]            27   2.1  
XP_811521   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.3  
XP_809961   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.3  
XP_818963   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.4  
XP_818848   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.4  
XP_817333   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.6  
ABA06473  MSA-2b  (Invasion)  [Babesia bovis]                          26   2.8  
XP_808165   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   2.8  
XP_812615   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   3.0  
XP_808201   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   3.5  
XP_001349036  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   3.6  
ABA06465  MSA-2c  (Invasion)  [Babesia bovis]                          26   3.6  
ABA06476  MSA-2a2  (Invasion)  [Babesia bovis]                         26   3.6  
XP_806381   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   3.6  
ABA06464  MSA-2c  (Invasion)  [Babesia bovis]                          26   3.6  
XP_808639   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   4.4  
XP_815807   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   4.5  
XP_816557   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   4.6  
XP_804902   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   4.6  
AAL15420  MSA-2c  (Invasion)  [Babesia bovis]                          25   5.4  
XP_821162   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   7.8  
XP_809659   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   8.3  
ABR92027  MSA-1  (Invasion)  [Babesia bovis]                           25   8.6  
ABR92031  MSA-1  (Invasion)  [Babesia bovis]                           25   8.9  
ABR92029  MSA-1  (Invasion)  [Babesia bovis]                           25   9.0  

>EAY10962.1 on XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]
          Length = 2112

 Score = 37.7 bits (86), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 11/66 (16%)

Query: 185 PAENPY-VPPSNPYVPPSEPAPKPT--PPPQDPPKPA--PKPADPPKPAPKPAAPAAEPC 239
           P ENP  V   NP     E  P P   P P++ P P   P P + P P  KP  P   PC
Sbjct: 502 PEENPEPVEKPNP-----EENPNPVEKPTPEENPNPVEKPTPEENPNPVEKP-EPEKNPC 555

Query: 240 ASIPNC 245
            ++ +C
Sbjct: 556 INMEDC 561




 Score = 35.4 bits (80), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 30/80 (37%), Gaps = 3/80 (3%)

Query: 161 PTMPSMPPPTTPQPNTYQMPPPSAPAENPYVPPSNPYVPPSEPAPKPTPPPQDPPKPAP- 219
           P  PS   P +P  +T   P  S P       P NP    S P       P +P +  P 
Sbjct: 763 PGSPSESTPGSPSESTPGSPSESTPGSPSESTPGNP--SESTPGSPSESTPGNPSESTPG 820

Query: 220 KPADPPKPAPKPAAPAAEPC 239
            P++    +P  + P +  C
Sbjct: 821 SPSESTPGSPSESTPCSGTC 840




 Score = 32.7 bits (73), Expect = 0.033,   Method: Composition-based stats.
 Identities = 24/86 (27%), Positives = 31/86 (36%), Gaps = 4/86 (4%)

Query: 132 KQIEQNGESDGNEAPAEDVNSIPQKQDPAPTMPSMPPPTTPQPNTYQMPPPSAPAENPYV 191
           K+I  NG      +P+E     P +  P    PS   P +P  +T   P  S P      
Sbjct: 752 KKICDNGVVLPPGSPSESTPGSPSESTPGS--PSESTPGSPSESTPGNPSESTPGSPSES 809

Query: 192 PPSNP--YVPPSEPAPKPTPPPQDPP 215
            P NP    P S     P  P +  P
Sbjct: 810 TPGNPSESTPGSPSESTPGSPSESTP 835




 Score = 25.8 bits (55), Expect = 3.7,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 24/58 (41%)

Query: 219 PKPADPPKPAPKPAAPAAEPCASIPNCKYNREPALQYFKEQGIPLVTKCYPQPDPSLS 276
           PKP + P+P  KP           P  + N  P  +   E+    V K  P+ +P ++
Sbjct: 500 PKPEENPEPVEKPNPEENPNPVEKPTPEENPNPVEKPTPEENPNPVEKPEPEKNPCIN 557



>EAY10962.1 on AAL15422  MSA-2a2  (Invasion)  [Babesia bovis]
          Length = 292

 Score = 31.6 bits (70), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 25/96 (26%), Positives = 38/96 (39%), Gaps = 2/96 (2%)

Query: 175 NTYQMPPPSAPAENPYVPPSNPYVPPSEPAPKPTPPPQDPPKPAPK--PADPPKPAPKPA 232
           N Y       PA+     PS+P  P      + +  P  P  P+P+   A+ P  A  P 
Sbjct: 191 NEYDELVKKKPAQESSPAPSSPQRPAETQQTQDSTAPGTPAAPSPQGPTAESPSQADHPT 250

Query: 233 APAAEPCASIPNCKYNREPALQYFKEQGIPLVTKCY 268
            P   P  ++   +   +PA   F   G+ + T CY
Sbjct: 251 KPTQTPEGNLQGQQGTTKPAGSSFTYGGLTVATLCY 286



>EAY10962.1 on XP_815479   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1047

 Score = 32.0 bits (71), Expect = 0.049,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 22/44 (50%)

Query: 140  SDGNEAPAEDVNSIPQKQDPAPTMPSMPPPTTPQPNTYQMPPPS 183
            ++G E+ +EDV  +PQ  D AP   +  P  T  P+      PS
Sbjct: 957  TEGEESSSEDVKEVPQTVDTAPGNTNTTPGETMIPSESNATTPS 1000



>EAY10962.1 on ABR92030  MSA-1  (Invasion)  [Babesia bovis]
          Length = 328

 Score = 31.6 bits (70), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 4/74 (5%)

Query: 196 PYVPPSEPAPKPTPPPQDPPKPAP-KPADPPKPAPKPAAPAAEPCASIPNCKYNREPALQ 254
           P VP +E   + TP  Q P KP   KP + P  A   ++P   P  ++   + + +PA  
Sbjct: 252 PQVPEAEQTQQVTPAVQ-PSKPTTGKPTEDP--AASGSSPVERPAGNLTGQQDSSKPAGS 308

Query: 255 YFKEQGIPLVTKCY 268
            F   G+ + T CY
Sbjct: 309 SFTFGGLTVATLCY 322



>EAY10962.1 on ABR92024  MSA-1  (Invasion)  [Babesia bovis]
          Length = 330

 Score = 30.8 bits (68), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 27/127 (21%)

Query: 144 EAPAEDVNSIPQKQDPAPTMPSMPPPTTPQPNTYQMPPPSAPAENPYVPPSNPYVPPSEP 203
           EAP E V++I +       +  +  PT P+ NT ++P  +AP  +           P+ P
Sbjct: 223 EAPKELVSAIEE------AVAKIKAPTNPE-NT-ELPAQAAPGASE----------PTSP 264

Query: 204 APKPTPP--PQDPPKPAPKPADPPKPAPKPAAPAAEPCASIPNCKYNREPALQYFKEQGI 261
             +PT P  PQ P   A +PA  P P+ KP  PA     ++   + + +PA   F   G+
Sbjct: 265 GGQPTAPAAPQ-PGASATEPAQEPAPSTKPEQPA----GNLSGQQGSPKPA--SFTFGGL 317

Query: 262 PLVTKCY 268
            + T CY
Sbjct: 318 TVATLCY 324



>EAY10962.1 on XP_805038   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 927

 Score = 30.8 bits (68), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 3/76 (3%)

Query: 162 TMPSMPPPTTPQPN-TYQMPPPSAPAENPYVPPSNPYVPPSEPAPKPTPPPQDPPKPAPK 220
           T P++PPP T  P  T Q    ++   +   PP+ P  P SE  PKP     + PKPA  
Sbjct: 720 TQPTVPPPATAGPQQTDQTTLNTSSVPSGGAPPT-PAEPKSEE-PKPAESRPEEPKPAES 777

Query: 221 PADPPKPAPKPAAPAA 236
            ++ PKPA   AA ++
Sbjct: 778 ESEEPKPAEPNAATSS 793



>EAY10962.1 on XP_810140   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 923

 Score = 30.4 bits (67), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 41/95 (43%), Gaps = 15/95 (15%)

Query: 148 EDVNSIPQKQDPAPTMPSMPPPTTPQPNTYQMPPPSAPAENPYVPPSNPYVPPSEPAPKP 207
           E + +  Q   PAPT P+ P PTT           +  +      PS P V  SE  PKP
Sbjct: 712 ERMTTNTQPTAPAPT-PAGPQPTT-------RVTSNGSSGASGGAPSTPAVSESEE-PKP 762

Query: 208 TPPPQDPPKPAPKPADPPKPA------PKPAAPAA 236
                + PKPA   ++ PKP       PKPA P A
Sbjct: 763 AESESEEPKPAESESEEPKPVESESEEPKPAEPNA 797




 Score = 27.3 bits (59), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 38/85 (44%), Gaps = 12/85 (14%)

Query: 161 PTMPSMPPPTTPQPNTYQMPPPSAPAENPYVPPSNPYVPPSE---PA------PKPTPPP 211
           PT P+ P P  PQP T      S+ A      PS P V  SE   PA      PKP    
Sbjct: 720 PTAPA-PTPAGPQPTTRVTSNGSSGASGG--APSTPAVSESEEPKPAESESEEPKPAESE 776

Query: 212 QDPPKPAPKPADPPKPAPKPAAPAA 236
            + PKP    ++ PKPA   AA ++
Sbjct: 777 SEEPKPVESESEEPKPAEPNAATSS 801




 Score = 26.9 bits (58), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 34/83 (40%), Gaps = 25/83 (30%)

Query: 180 PPPSAPAENPYVPPSNPYVP----PSEPAPKPTPP---------------PQDPPKPAPK 220
           P P+A A +P V P+N  +     P+ PAP P  P                  P  PA  
Sbjct: 696 PVPAAAATSPSVGPANERMTTNTQPTAPAPTPAGPQPTTRVTSNGSSGASGGAPSTPAVS 755

Query: 221 PADPPKPA------PKPAAPAAE 237
            ++ PKPA      PKPA   +E
Sbjct: 756 ESEEPKPAESESEEPKPAESESE 778



>EAY10962.1 on XP_807541   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 920

 Score = 28.9 bits (63), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 2/46 (4%)

Query: 193 PSNPYVPPSEPAPKPTPPPQDPPKPAPKPADPPKPA-PKPAAPAAE 237
           PS P V  SE  PKP     + PK A   ++ PKPA P  A  +AE
Sbjct: 756 PSTPAVSESEE-PKPAVSESEEPKSAESESEEPKPAEPNAATSSAE 800



>EAY10962.1 on XP_817389   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 792

 Score = 28.9 bits (63), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)

Query: 187 ENPYVPPSNPYVPPSEPAPKPTPPPQDPPKPAPKPADPP 225
           E P++PP+NP   P+E  P+     Q    PA KP++ P
Sbjct: 674 EAPHLPPANP--QPTEAVPQSVEGDQKAMPPAGKPSEAP 710



>EAY10962.1 on XP_813123   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1048

 Score = 28.5 bits (62), Expect = 0.56,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 20/44 (45%)

Query: 140  SDGNEAPAEDVNSIPQKQDPAPTMPSMPPPTTPQPNTYQMPPPS 183
            +DG E  +ED   +P+  D AP   +  P  T  P+      PS
Sbjct: 958  TDGAEVSSEDGKEVPRTVDTAPENKNTTPGETKIPSESNATTPS 1001



>EAY10962.1 on XP_811703   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1043

 Score = 28.5 bits (62), Expect = 0.57,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 19/44 (43%)

Query: 140 SDGNEAPAEDVNSIPQKQDPAPTMPSMPPPTTPQPNTYQMPPPS 183
           ++G E   ED   +PQ  D AP   S  P  T  P+      PS
Sbjct: 953 TEGAEFSVEDGKEVPQTVDTAPGNTSTTPGETKIPSESNATTPS 996



>EAY10962.1 on XP_820186   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1133

 Score = 28.5 bits (62), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 23/49 (46%), Positives = 26/49 (53%), Gaps = 7/49 (14%)

Query: 204 APKPTPPPQDPPKPA------PKPADPPKPAPKPAAP-AAEPCASIPNC 245
            PKP  P    PKPA      PKPA+P    PKPA P +AEP  + PN 
Sbjct: 891 GPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPNS 939




 Score = 27.7 bits (60), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 41/92 (44%), Gaps = 13/92 (14%)

Query: 154  PQKQDPAPTMPSMPPPTTPQPNTYQMPPPSAPAENPYVPPSNPYVPPSEPAPKPTPPPQD 213
            P+  +P P  P    P   +PN+ + P P+ P      P       P    PKP  P   
Sbjct: 917  PKSAEPKPAEPKSAEPKPAEPNSAE-PKPAEPKSAEPKP-----AEPKSAEPKPAEPKSA 970

Query: 214  PPKPA------PKPADPPKPAPKPAAP-AAEP 238
             PKPA      PKPA+P    PKPA P +AEP
Sbjct: 971  EPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEP 1002




 Score = 26.6 bits (57), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 20/43 (46%), Positives = 21/43 (48%), Gaps = 6/43 (13%)

Query: 200  PSEPAPKPTPPPQDPPKPA------PKPADPPKPAPKPAAPAA 236
            P    PKP  P    PKPA      PKPA+P    PKPA P A
Sbjct: 987  PKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPNA 1029




 Score = 25.0 bits (53), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%)

Query: 209 PPPQDPPKPAPKPADPPKPAPKPAAP-AAEP 238
           P P +P    PKPA+P    PKPA P +AEP
Sbjct: 842 PKPAEPKSAEPKPAEPKSAEPKPAEPKSAEP 872




 Score = 24.6 bits (52), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 18/39 (46%), Positives = 19/39 (48%), Gaps = 6/39 (15%)

Query: 200 PSEPAPKPTPPPQDPPKPA------PKPADPPKPAPKPA 232
           P    PKP  P    PKPA      PKPA+P    PKPA
Sbjct: 847 PKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPA 885




 Score = 24.6 bits (52), Expect = 10.0,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 50/104 (48%), Gaps = 13/104 (12%)

Query: 154  PQKQDPAPTMPSMPPPTTPQPNTYQMPPPSAP--AENPYVPPSNPYVPPSEPA---PKPT 208
            P+  +P P  P+   P   +P + + P P+ P  AE     P +    P+EP    PKP 
Sbjct: 927  PKSAEPKPAEPNSAEPKPAEPKSAE-PKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPA 985

Query: 209  PPPQDPPKPA-P-----KPADPPKPAPKPAAP-AAEPCASIPNC 245
             P    PKPA P     KPA+P    PKPA P +AEP  + PN 
Sbjct: 986  EPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPKSAEPKPAEPNA 1029



>EAY10962.1 on ABA06437  MSA-2a/b  (Invasion)  [Babesia bovis]
          Length = 263

 Score = 28.1 bits (61), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 20/68 (29%), Positives = 26/68 (38%), Gaps = 5/68 (7%)

Query: 202 EPAPKPTPP-PQDPPKPAPKPADPPKPAPKPAAPAAEPCASIPNCKYNREPALQYFKEQG 260
           E   K TP  P  P   + +     +P+   AAP      S  N     EPA   F   G
Sbjct: 194 EELVKKTPGNPSSPTHSSSQGTTTTRPSQDSAAPNT----SAGNLNGQNEPAKSSFTFGG 249

Query: 261 IPLVTKCY 268
           + + T CY
Sbjct: 250 LTVATLCY 257



>EAY10962.1 on XP_817719   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1053

 Score = 28.5 bits (62), Expect = 0.63,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 21/44 (47%)

Query: 140  SDGNEAPAEDVNSIPQKQDPAPTMPSMPPPTTPQPNTYQMPPPS 183
            ++G+E  +E+   +PQ  D AP   +  P  T  P+      PS
Sbjct: 963  TEGDEVSSENGEEVPQTGDTAPENTNTTPGETAIPSESNATTPS 1006



>EAY10962.1 on XP_806299   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1047

 Score = 28.5 bits (62), Expect = 0.63,   Method: Composition-based stats.
 Identities = 14/37 (37%), Positives = 19/37 (51%)

Query: 140 SDGNEAPAEDVNSIPQKQDPAPTMPSMPPPTTPQPNT 176
           S+G E  +EDV  +PQ  D AP   +  P     P+T
Sbjct: 960 SEGGEFSSEDVEEVPQTVDAAPGNTNTTPGGEGIPST 996



>EAY10962.1 on XP_807476   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 856

 Score = 28.5 bits (62), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 14/38 (36%), Positives = 19/38 (50%)

Query: 139 ESDGNEAPAEDVNSIPQKQDPAPTMPSMPPPTTPQPNT 176
           E+DG E  +EDV  + Q  D AP   +  P     P+T
Sbjct: 768 EADGTEFSSEDVEEVLQTVDAAPGNTNTTPGGEGIPST 805



>EAY10962.1 on XP_001349032  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2267

 Score = 28.5 bits (62), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)

Query: 201  SEPAPKPTPPPQDP--PKPAPKPADPPKPAPKPAAPAAEP 238
            +E  P    PPQD   PKPA +P D  +P  +P  P   P
Sbjct: 1722 TEELPSAPEPPQDKALPKPAAQPKDKKRPKRQPQNPWEHP 1761



>EAY10962.1 on XP_001351319  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2646

 Score = 28.1 bits (61), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 3/47 (6%)

Query: 45  GGASEEAVEFYQNVRDNVREFQEEDVTNTRHFVNAIWDDLTGKIKNG 91
           GG SEEA + YQ+   N  + +E+  T  R     +W  +T ++K+G
Sbjct: 240 GGLSEEAKKKYQDGDGNYYQLREDWWTANRE---TVWKAITCEVKSG 283



>EAY10962.1 on XP_812613   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1038

 Score = 28.1 bits (61), Expect = 0.77,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 19/44 (43%)

Query: 140 SDGNEAPAEDVNSIPQKQDPAPTMPSMPPPTTPQPNTYQMPPPS 183
           ++G E  +ED    PQ  D AP   +  P  T  P+      PS
Sbjct: 948 TEGTEVSSEDGKEAPQTVDTAPGNTNTAPGKTEIPSESNATTPS 991



>EAY10962.1 on AAC37226  SBP1  (Others)  [Babesia bovis]
          Length = 596

 Score = 28.1 bits (61), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 29/71 (40%), Positives = 33/71 (46%), Gaps = 10/71 (14%)

Query: 181 PPSAPAENPYVPPSNPYVPPSEPAPKPTPPPQDPP--KPAPKPADPP------KPAPKPA 232
           P   PAE P   P+    P  +PA KP   P + P  KPA KPA+ P       PA KPA
Sbjct: 328 PAEKPAETPAETPAEK--PAEKPAEKPAEKPAEKPAEKPAEKPAETPAETPAETPAEKPA 385

Query: 233 APAAEPCASIP 243
              AE  A  P
Sbjct: 386 ETPAETPAETP 396




 Score = 26.6 bits (57), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 32/66 (48%), Gaps = 7/66 (10%)

Query: 181 PPSAPAENPY-VPPSNPYVPPSE-PAPKPTPPPQDPP--KPAPKPADPP--KPAPKPA-A 233
           P   PAE P   P   P   P+E PA  P   P + P   PA  PA+ P   PA KPA  
Sbjct: 368 PAETPAETPAETPAEKPAETPAETPAETPAETPAETPAETPAETPAETPAETPAEKPAEK 427

Query: 234 PAAEPC 239
           PA+ PC
Sbjct: 428 PASRPC 433




 Score = 26.6 bits (57), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 29/55 (52%), Gaps = 4/55 (7%)

Query: 202 EPAPKPTPPPQDPP--KPAPKPADPP--KPAPKPAAPAAEPCASIPNCKYNREPA 252
           EPA KP   P + P  KPA  PA+ P  KPA KPA   AE  A  P  K   +PA
Sbjct: 315 EPAEKPAEKPAEKPAEKPAETPAETPAEKPAEKPAEKPAEKPAEKPAEKPAEKPA 369




 Score = 25.4 bits (54), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 31/67 (46%), Gaps = 6/67 (8%)

Query: 181 PPSAPAENPYVPPSNPYVPPSEPAPKPTPPPQDPP--KPAPKPADPP--KPAPKPAAPAA 236
           P   PAE P   P+    P  +PA KP   P + P   PA KPA+ P   PA  PA   A
Sbjct: 344 PAEKPAEKPAEKPAEK--PAEKPAEKPAETPAETPAETPAEKPAETPAETPAETPAETPA 401

Query: 237 EPCASIP 243
           E  A  P
Sbjct: 402 ETPAETP 408




 Score = 24.6 bits (52), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 26/63 (41%), Gaps = 2/63 (3%)

Query: 181 PPSAPAENPYVPPSNPYVPPSEPAPKPTPPPQDPPKPAPKPADPPKPAPKPAAPAAEPCA 240
           P   PAE P   P+    P  +PA KP   P + P   P      KPA  PA   AE  A
Sbjct: 340 PAEKPAEKPAEKPAEK--PAEKPAEKPAEKPAETPAETPAETPAEKPAETPAETPAETPA 397

Query: 241 SIP 243
             P
Sbjct: 398 ETP 400



>EAY10962.1 on XP_807986   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1054

 Score = 28.1 bits (61), Expect = 0.83,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 21/44 (47%)

Query: 140  SDGNEAPAEDVNSIPQKQDPAPTMPSMPPPTTPQPNTYQMPPPS 183
            ++G E+ +EDV  +PQ  D A    +  P  T  P+      PS
Sbjct: 964  TEGEESSSEDVKEVPQTVDTASGNTNTTPGETKIPSGSNATIPS 1007



>EAY10962.1 on XP_813188   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1002

 Score = 27.7 bits (60), Expect = 0.95,   Method: Composition-based stats.
 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 3/61 (4%)

Query: 182 PSAPAENPYVPPSNPYVPPSEPAPK-PTPPPQDPPKPAPKPADPPKPAPKPAAPAAEPCA 240
           P A    P   P N ++  S+P+ K  TP PQ       K  +    A    AP+A+P  
Sbjct: 703 PEAEVSAPKGAPQNSHL--SQPSEKDATPSPQKQDLSPEKSKNEKHSAGSGQAPSADPAG 760

Query: 241 S 241
           S
Sbjct: 761 S 761



>EAY10962.1 on XP_813587   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 751

 Score = 27.7 bits (60), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 33/83 (39%), Gaps = 27/83 (32%)

Query: 162 TMPSMPPPTTPQP--------NTYQMPPPSAPAENPYVPPSNPYVPPSEPAPKPTPPPQD 213
           T P++PPP T  P        NT  +P   AP+                    P  P  +
Sbjct: 554 TQPTVPPPATAGPQQTDQATLNTSSVPSGGAPS-------------------TPAEPKSE 594

Query: 214 PPKPAPKPADPPKPAPKPAAPAA 236
            PKPA   ++ PKPA   AA ++
Sbjct: 595 EPKPAESESEEPKPAEPNAATSS 617



>EAY10962.1 on XP_809824   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 364

 Score = 27.3 bits (59), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 33/75 (44%), Gaps = 17/75 (22%)

Query: 162 TMPSMPPPTTPQP--------NTYQMPPPSAPAENPYVPPSNPYVPPSEPAPKPTPPPQD 213
           T P++P P T  P        NT  +P   AP        S P  P SE  PKP     +
Sbjct: 157 TQPTVPSPATAGPQQTDQATLNTSSVPSGGAP--------STPAEPKSEE-PKPAESRPE 207

Query: 214 PPKPAPKPADPPKPA 228
            PKPA   ++ PKPA
Sbjct: 208 EPKPAESESEEPKPA 222



>EAY10962.1 on XP_818394   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1059

 Score = 27.3 bits (59), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 20/44 (45%)

Query: 140  SDGNEAPAEDVNSIPQKQDPAPTMPSMPPPTTPQPNTYQMPPPS 183
            +DG E  +ED   +P+  D AP   +  P  +  P+      PS
Sbjct: 969  TDGAEVSSEDGKEVPRTVDTAPENTNTTPGESKIPSESNATTPS 1012



>EAY10962.1 on XP_809960   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 890

 Score = 26.9 bits (58), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 13/53 (24%), Positives = 21/53 (39%)

Query: 182 PSAPAENPYVPPSNPYVPPSEPAPKPTPPPQDPPKPAPKPADPPKPAPKPAAP 234
           PS  + +  +PPS+P  P ++    P+ P    P    +     K A    A 
Sbjct: 728 PSTVSSDSIIPPSHPVTPNAQKTETPSTPAGTHPLEQGQSMGSSKDAGSGGAS 780



>EAY10962.1 on XP_845638  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 510

 Score = 26.9 bits (58), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 13/37 (35%), Positives = 21/37 (56%)

Query: 113 DDASAKREKDCKIFAIKLKKQIEQNGESDGNEAPAED 149
           +D + + EK CK+   K+ +   Q GE+ GNE  A +
Sbjct: 429 NDKATEGEKKCKLNTTKVGQAKTQAGETKGNEQTATE 465



>EAY10962.1 on XP_804686   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1045

 Score = 26.9 bits (58), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 18/37 (48%)

Query: 140 SDGNEAPAEDVNSIPQKQDPAPTMPSMPPPTTPQPNT 176
           ++G E  +ED   +PQ  D AP   S  P     P+T
Sbjct: 956 TEGAEVSSEDGGEMPQTVDTAPANTSTTPGDEAIPST 992



>EAY10962.1 on XP_001349515  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 1711

 Score = 26.9 bits (58), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 17/40 (42%), Positives = 19/40 (47%)

Query: 203  PAPKPTPPPQDPPKPAPKPADPPKPAPKPAAPAAEPCASI 242
            P PK  P P   PK  PK  D P PA K A  ++    SI
Sbjct: 1216 PEPKVLPKPPKLPKRQPKERDFPTPALKNAMLSSTIMWSI 1255



>EAY10962.1 on ABA06450  MSA-2a1  (Invasion)  [Babesia bovis]
          Length = 316

 Score = 26.6 bits (57), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 2/60 (3%)

Query: 211 PQDPPKPAPK--PADPPKPAPKPAAPAAEPCASIPNCKYNREPALQYFKEQGIPLVTKCY 268
           P  P  P+P+   A+ P  A  P  P   P  ++   +   +PA   F   G+ + T CY
Sbjct: 251 PGTPAAPSPQGPTAESPSQADHPTKPTQTPEGNLQGQQGTTKPAGSSFTYGGLTVATLCY 310



>EAY10962.1 on AAL15421  MSA-2a1  (Invasion)  [Babesia bovis]
          Length = 316

 Score = 26.6 bits (57), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 2/60 (3%)

Query: 211 PQDPPKPAPK--PADPPKPAPKPAAPAAEPCASIPNCKYNREPALQYFKEQGIPLVTKCY 268
           P  P  P+P+   A+ P  A  P  P   P  ++   +   +PA   F   G+ + T CY
Sbjct: 251 PGTPAAPSPQGPTAESPSQADHPTKPTQTPEGNLQGQQGTTKPAGSSFTYGGLTVATLCY 310



>EAY10962.1 on XP_808156   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1058

 Score = 26.9 bits (58), Expect = 2.0,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 20/44 (45%)

Query: 140  SDGNEAPAEDVNSIPQKQDPAPTMPSMPPPTTPQPNTYQMPPPS 183
            +DG E  +E+   +PQ  + AP   +  P  T  P+      PS
Sbjct: 968  TDGAEVSSENGKEVPQTVETAPGNTNTTPGETEIPSESNATTPS 1011



>EAY10962.1 on XP_966307  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2238

 Score = 26.9 bits (58), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 16/89 (17%)

Query: 155  QKQDPAPTMPSMPPPTTPQPN-TYQMPPPSAPAENPYVPPSNPYVPPSEPAPKPTPPPQD 213
            +K +PA T P  P   + +     ++PPP A  E           PP + A K       
Sbjct: 1673 EKCEPAQTAPKKPAADSERQTPEEKLPPPPAAKEEK---------PPKQNAEKT------ 1717

Query: 214  PPKPAPKPADPPKPAPKPAAPAAEPCASI 242
             PK +P+P D   PA K A  ++    SI
Sbjct: 1718 KPKRSPRPIDDLTPALKKAMLSSTIMWSI 1746




 Score = 25.8 bits (55), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 17/64 (26%), Positives = 24/64 (37%)

Query: 175  NTYQMPPPSAPAENPYVPPSNPYVPPSEPAPKPTPPPQDPPKPAPKPADPPKPAPKPAAP 234
            +  + PP     E    P       P+  + + TP  + PP PA K   PPK   +   P
Sbjct: 1660 DVLKTPPKQEEGEEKCEPAQTAPKKPAADSERQTPEEKLPPPPAAKEEKPPKQNAEKTKP 1719

Query: 235  AAEP 238
               P
Sbjct: 1720 KRSP 1723



>EAY10962.1 on XP_811521   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 830

 Score = 26.6 bits (57), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 19/50 (38%), Positives = 21/50 (42%), Gaps = 7/50 (14%)

Query: 203 PAPKPTPPPQDPPKPAPKPADP-----PKPAPKPAAPAAEPCASIPNCKY 247
           P PK  P PQ   K APKP  P     P P   PAAP         N ++
Sbjct: 733 PVPKRAPEPQ--VKIAPKPVAPALPAVPGPREVPAAPGRTTVGRTANTQH 780



>EAY10962.1 on XP_809961   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 916

 Score = 26.6 bits (57), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 12/28 (42%), Positives = 15/28 (53%)

Query: 209 PPPQDPPKPAPKPADPPKPAPKPAAPAA 236
           P P +     PKPA+     PKPA P+A
Sbjct: 751 PTPAESESEGPKPAESESEGPKPAEPSA 778




 Score = 25.8 bits (55), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 14/39 (35%), Positives = 19/39 (48%)

Query: 198 VPPSEPAPKPTPPPQDPPKPAPKPADPPKPAPKPAAPAA 236
           V     AP P     + PKPA   ++ PKPA   AA ++
Sbjct: 744 VRSGGAAPTPAESESEGPKPAESESEGPKPAEPSAATSS 782



>EAY10962.1 on XP_818963   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1055

 Score = 26.6 bits (57), Expect = 2.4,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 18/37 (48%)

Query: 140  SDGNEAPAEDVNSIPQKQDPAPTMPSMPPPTTPQPNT 176
            ++G E   EDV  +PQ  D AP   +  P     P+T
Sbjct: 967  TEGAEFSFEDVKEVPQTVDTAPENTNTTPGGEGIPST 1003



>EAY10962.1 on XP_818848   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1053

 Score = 26.6 bits (57), Expect = 2.4,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 19/44 (43%)

Query: 140  SDGNEAPAEDVNSIPQKQDPAPTMPSMPPPTTPQPNTYQMPPPS 183
            ++G E  +ED   +PQ  D A    S  P  T  P+      PS
Sbjct: 963  TEGAEVSSEDGKEVPQTVDTASGNTSTAPVETNIPSELNATTPS 1006



>EAY10962.1 on XP_817333   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1037

 Score = 26.6 bits (57), Expect = 2.6,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 19/43 (44%)

Query: 141 DGNEAPAEDVNSIPQKQDPAPTMPSMPPPTTPQPNTYQMPPPS 183
           +G+E   ED   +PQ  D AP   +  P  T  P+      PS
Sbjct: 949 EGDEFFFEDSKQVPQTVDTAPGNTNTTPGETAIPSESNATTPS 991



>EAY10962.1 on ABA06473  MSA-2b  (Invasion)  [Babesia bovis]
          Length = 316

 Score = 26.2 bits (56), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 2/60 (3%)

Query: 211 PQDPPKPAPK--PADPPKPAPKPAAPAAEPCASIPNCKYNREPALQYFKEQGIPLVTKCY 268
           P  P  P+P+   A+ P  A  P  P   P  ++   +   +PA   F   G+ + T CY
Sbjct: 251 PGTPAAPSPQGPTAESPSQADHPTKPTQTPEGNLQGQQGTTKPAGSSFTYGGLTVATLCY 310



>EAY10962.1 on XP_808165   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 918

 Score = 26.2 bits (56), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)

Query: 200 PSEPAPKPTPPPQ--DPPKPAPKPADPPKPAPKPAAPAA 236
           PS PA   +  P+  D     P+PA+     PKPA P A
Sbjct: 754 PSTPAESESEEPKSADSESEGPRPAESESEGPKPAEPNA 792



>EAY10962.1 on XP_812615   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1116

 Score = 26.2 bits (56), Expect = 3.0,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 18/44 (40%)

Query: 140  SDGNEAPAEDVNSIPQKQDPAPTMPSMPPPTTPQPNTYQMPPPS 183
            ++G E  +ED    PQ  D AP   +  P     P+      PS
Sbjct: 1026 TEGTEVSSEDGKEAPQTVDTAPGNTNTAPGEAAIPSESNATTPS 1069



>EAY10962.1 on XP_808201   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1044

 Score = 26.2 bits (56), Expect = 3.5,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 18/37 (48%)

Query: 140 SDGNEAPAEDVNSIPQKQDPAPTMPSMPPPTTPQPNT 176
           ++G E P E+   +PQ  D AP   +  P     P+T
Sbjct: 956 TEGTEFPVENGKEVPQTVDTAPGNTNTTPGGEGIPST 992



>EAY10962.1 on XP_001349036  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2192

 Score = 26.2 bits (56), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 36/102 (35%), Gaps = 14/102 (13%)

Query: 127  AIKLKKQIEQNGESDGNEAPAEDVNSIPQKQDPAPTM--------PSMPPPTTPQPNTYQ 178
            AIK    + Q  ES      A   N  PQK+D    +         S P PT+ +  T  
Sbjct: 1606 AIKPCGDLHQFEESRHCNGAASSENGKPQKKDIVECLLDRLKKKATSCPAPTSGENPTQC 1665

Query: 179  MPPPSAPAENPYVPPSNPYVPPSEPAPKPTPPPQDPPKPAPK 220
              PP     +  +   N    P+        PPQ PPK   K
Sbjct: 1666 QEPPLVEDNDEAIEEENSVTQPN------ICPPQTPPKQEEK 1701



>EAY10962.1 on ABA06465  MSA-2c  (Invasion)  [Babesia bovis]
          Length = 265

 Score = 25.8 bits (55), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 3/49 (6%)

Query: 197 YVPPSEPAPKPTPPPQDPPKPA---PKPADPPKPAPKPAAPAAEPCASI 242
           ++ PS  +   TP P      A   PKPA+ PKP            A++
Sbjct: 209 FINPSSTSEAETPSPSSGENTAAQPPKPAETPKPTGSSFTYGGLTVATL 257



>EAY10962.1 on ABA06476  MSA-2a2  (Invasion)  [Babesia bovis]
          Length = 265

 Score = 25.8 bits (55), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 3/49 (6%)

Query: 197 YVPPSEPAPKPTPPPQDPPKPA---PKPADPPKPAPKPAAPAAEPCASI 242
           ++ PS  +   TP P      A   PKPA+ PKP            A++
Sbjct: 209 FINPSSTSEAETPSPSSGENTAAQPPKPAETPKPTGSSFTYGGLTVATL 257



>EAY10962.1 on XP_806381   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1045

 Score = 25.8 bits (55), Expect = 3.6,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 19/44 (43%)

Query: 140 SDGNEAPAEDVNSIPQKQDPAPTMPSMPPPTTPQPNTYQMPPPS 183
           ++G E  +ED    PQ  D AP   +  P  T  P+      PS
Sbjct: 955 TEGAEFSSEDGEEAPQTVDTAPGNTNTAPGETKIPSESNATTPS 998



>EAY10962.1 on ABA06464  MSA-2c  (Invasion)  [Babesia bovis]
          Length = 265

 Score = 25.8 bits (55), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 3/49 (6%)

Query: 197 YVPPSEPAPKPTPPPQDPPKPA---PKPADPPKPAPKPAAPAAEPCASI 242
           ++ PS  +   TP P      A   PKPA+ PKP            A++
Sbjct: 209 FINPSSTSEAETPSPSSGENTAAQPPKPAETPKPTGSSFTYGGLTVATL 257



>EAY10962.1 on XP_808639   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 949

 Score = 25.8 bits (55), Expect = 4.4,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 1/72 (1%)

Query: 114 DASAKREKDCKIFAIKLKKQIEQNGESDGNEAPAEDVN-SIPQKQDPAPTMPSMPPPTTP 172
           D  AK + + +  ++ +   +  N   + +E  A +   SI + +D        PPP   
Sbjct: 692 DGGAKADSEVQDVSVTVTNVLLYNRPLNDDEISALNAKLSISKAKDTKTVKKGTPPPEAI 751

Query: 173 QPNTYQMPPPSA 184
           +P T +   PS+
Sbjct: 752 KPATLETGTPSS 763



>EAY10962.1 on XP_815807   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 899

 Score = 25.8 bits (55), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 13/55 (23%), Positives = 22/55 (40%)

Query: 182 PSAPAENPYVPPSNPYVPPSEPAPKPTPPPQDPPKPAPKPADPPKPAPKPAAPAA 236
           PS  + +  +PPS+P  P ++     + P    P    +  +  K A    A  A
Sbjct: 737 PSKVSSDSIIPPSHPATPNAQKTEASSTPAGRHPMEQGQSMESSKDADSGGASTA 791



>EAY10962.1 on XP_816557   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 834

 Score = 25.4 bits (54), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 19/50 (38%), Positives = 21/50 (42%), Gaps = 7/50 (14%)

Query: 203 PAPKPTPPPQDPPKPAPKPADP-----PKPAPKPAAPAAEPCASIPNCKY 247
           P PK  P PQ   K APKP  P     P P   PAAP         N ++
Sbjct: 737 PVPKRAPEPQ--VKIAPKPVAPALPAVPGPREVPAAPGRTTVGRTANNQH 784




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10971.1 3'5'-cyclic nucleotide phosphodiesterase
family protein [Trichomonas vaginalis G3]
         (1103 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_821390   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.64 
XP_001350082  Rh2b  (Adhesin)  [Plasmodium falciparum]                 27   8.2  

>EAY10971.1 on XP_821390   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 940

 Score = 30.4 bits (67), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 37/151 (24%), Positives = 64/151 (42%), Gaps = 18/151 (11%)

Query: 641 CCKAKEGAISNNVQLDPRYD-DTLNQQLGIRVTNLLVYPVLSNKGKVLGVAEMINKPSGF 699
           CC     A +     +P+++  ++  + G+ V +L V  +L     V  VAE   K +G 
Sbjct: 57  CCSTGGAAEAAEQSSEPQFEWKSVKDEDGVTVESLGVPGLLKLGSGVFAVAEAQCKKNGE 116

Query: 700 SKADLNLLQFFTSFTAMALQ-----NQNVSAKLAADAGSTLSTEEENALNPEEEKKCEIP 754
           S           SFT +A Q       N   ++  DA  T   EE  A +PEEEK+ ++ 
Sbjct: 117 SD----------SFTGIASQILMMGKGNEPEEVLKDAKDTQVLEE--ATSPEEEKRVDVS 164

Query: 755 ERLVLPEQIQQKLTLREVFQPDFSEDERVAE 785
               + E  +  + + +    D +E +  +E
Sbjct: 165 RPTAVAEGGKIYMLVGKHSHEDVAECKATSE 195



>EAY10971.1 on XP_001350082  Rh2b  (Adhesin)  [Plasmodium falciparum]
          Length = 1115

 Score = 26.9 bits (58), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 14/49 (28%), Positives = 31/49 (63%), Gaps = 5/49 (10%)

Query: 1060 LKVWVQLGSKKKEAAAQQQQQQQQSQEQAQQPQQPQQEQK-----EEQK 1103
            L+   +L  +++E   +++Q+Q Q +E+ ++ +Q +Q+Q+     EEQK
Sbjct: 607  LQKEEELKRQEQERLEREKQEQLQKEEELRKKEQEKQQQRNIQELEEQK 655




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10972.1 hypothetical protein TVAG_446740 [Trichomonas
vaginalis G3]
         (227 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_816233   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.17 
XP_812069   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   0.29 
XP_816523   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.38 
XP_809179   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.52 
XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 28   0.61 
XP_815706   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   0.89 
XP_815707   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   0.89 
XP_001609315  variant erythrocyte surface antigen-1, alpha subun...    27   1.1  
XP_818394   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   3.0  
XP_816558   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   3.7  
XP_805751   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   4.7  
XP_819381   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   7.9  
XP_817719   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   8.1  
XP_812339   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   10.0 

>EAY10972.1 on XP_816233   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 851

 Score = 29.6 bits (65), Expect = 0.17,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 4/53 (7%)

Query: 146 LSQKQPEEDNTAQLSSRSRNSRIQPAP----EKETFSTAASNSSDAGQTEGDG 194
           ++ +QP+ +   Q ++   ++  Q  P    +      AASNS  AG+  GDG
Sbjct: 775 MTLQQPQHEGKGQNATAEESATTQEVPATTSQGSVAKAAASNSHAAGEARGDG 827



>EAY10972.1 on XP_812069   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 948

 Score = 28.9 bits (63), Expect = 0.29,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 53/133 (39%), Gaps = 10/133 (7%)

Query: 72  PTPVH---LSGAPANHDSRPSSTYSSSPSTPQETEHNIPQRVMQRRQQQEQQQTQQSEEE 128
           PTPV       A +N  S PS   +S+P+ P  T     +R   +           SE++
Sbjct: 757 PTPVAPQLTEQATSNGSSDPSGGDASTPAVPNTTTPAAGERSADQSASVASSSAANSEDD 816

Query: 129 SSNQYDLRQSVHSKLRYLSQ-KQPEE-----DNTAQLSSRSRNSRIQPAPEKETFSTAAS 182
           +S   D  Q+V  ++    Q  QP +      + A   S +  SR Q  P  ET    +S
Sbjct: 817 TSLSDD-AQTVGKEVADNKQGDQPTQVSVGVSDAANPKSHTAESRGQEEPAVETEGGVSS 875

Query: 183 NSSDAGQTEGDGK 195
           + +       DG+
Sbjct: 876 DENGETTGGADGQ 888



>EAY10972.1 on XP_816523   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 892

 Score = 28.5 bits (62), Expect = 0.38,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 62/161 (38%), Gaps = 14/161 (8%)

Query: 26  NFRINDLKGSHLPFLTEEHLKEMGITKIGHRILLMKRIKQIINGENPTPVHLSGAPANHD 85
           +F +   KGS +P ++   +  + +    +R L  + I+ +   ++     L G  A+ D
Sbjct: 615 HFHVGGYKGSDMPTISHVTVNNVLLY---NRQLNAEEIRTLFLSQD-----LIGTEAHMD 666

Query: 86  SRPSSTYSSSPSTPQE-TEHNIPQRVMQRRQQQEQQQTQQSEEESSNQYDLRQSVHSKLR 144
           S   S+   +PSTP + + H+ P   +             S   S+    +  S HS   
Sbjct: 667 SSSDSSAHGTPSTPADRSAHSAPSTPVDSSAHGTPSTPVDSSAHSTPSTTVDSSAHS--- 723

Query: 145 YLSQKQPEEDNTAQLSSRSRNSRIQPAPEKETFSTAASNSS 185
             +   P + +     S + +S     P     S+A S  S
Sbjct: 724 --TPSTPVDSSAHSTPSTTVDSSAHSTPSTTVDSSAHSTPS 762



>EAY10972.1 on XP_809179   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 853

 Score = 28.1 bits (61), Expect = 0.52,   Method: Composition-based stats.
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%)

Query: 147 SQKQPEEDNTAQLSSRSRNSRIQPAP----EKETFSTAASNSSDAGQTEGDG 194
           SQ+ P++  T + +    ++  Q  P    E      AASNS  AG+  GDG
Sbjct: 778 SQQSPQKSETQKNTMVRESAATQETPANTSEGSVEKAAASNSHAAGEATGDG 829



>EAY10972.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 27.7 bits (60), Expect = 0.61,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 2/70 (2%)

Query: 108  QRVMQRRQQQEQQQTQQSEEESSNQYDLRQSVHSKLRYLSQK--QPEEDNTAQLSSRSRN 165
            +R  Q R ++E+Q+  Q EEE   Q   R      L+   Q+  Q EE+   Q   R   
Sbjct: 2804 KRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQERLER 2863

Query: 166  SRIQPAPEKE 175
             +I+ A  ++
Sbjct: 2864 KKIELAEREQ 2873




 Score = 25.8 bits (55), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 28/60 (46%)

Query: 108  QRVMQRRQQQEQQQTQQSEEESSNQYDLRQSVHSKLRYLSQKQPEEDNTAQLSSRSRNSR 167
            +R  Q R ++E+Q+  Q EEE   Q   R      L+   Q++ +++   +   + R  R
Sbjct: 2754 KRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQERLER 2813




 Score = 24.6 bits (52), Expect = 5.6,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 28/57 (49%)

Query: 108  QRVMQRRQQQEQQQTQQSEEESSNQYDLRQSVHSKLRYLSQKQPEEDNTAQLSSRSR 164
            +R  Q R Q+E+   +Q +E    + +L++    +L    Q+Q +++   +   + R
Sbjct: 2776 KRQEQERLQKEEALKRQEQERLQKEEELKRQEQERLEREKQEQLQKEEELKRQEQER 2832



>EAY10972.1 on XP_815706   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 907

 Score = 27.3 bits (59), Expect = 0.89,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 43/117 (36%), Gaps = 10/117 (8%)

Query: 81  PANHDSRPSSTYSSSPSTP------QETEHNIPQRVMQRRQQQEQQQTQQSEEESSNQYD 134
           P      P++  +SS   P      + T+  +P       Q  +Q+    S   S     
Sbjct: 694 PPERKPVPAAAATSSSVEPLTTPAAKNTQPTVPSPATAGPQPTDQKSLSASSVPSGGALS 753

Query: 135 LRQSVHSKLRYLSQKQPEEDNTAQLSSRSRNSRIQPAPEKETFSTAASNSSDAGQTE 191
              +   +    ++ +PEE   A+    SR    +PA E      A+  SSDA  T+
Sbjct: 754 EPAASRPEEPEPAESRPEEPEPAE----SRPEEPEPAREGTADQPASVTSSDAASTD 806



>EAY10972.1 on XP_815707   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 907

 Score = 27.3 bits (59), Expect = 0.89,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 43/117 (36%), Gaps = 10/117 (8%)

Query: 81  PANHDSRPSSTYSSSPSTP------QETEHNIPQRVMQRRQQQEQQQTQQSEEESSNQYD 134
           P      P++  +SS   P      + T+  +P       Q  +Q+    S   S     
Sbjct: 694 PPERKPVPAAAATSSSVEPLTTPAAKNTQPTVPSPATAGPQPTDQKSLSASSVPSGGALS 753

Query: 135 LRQSVHSKLRYLSQKQPEEDNTAQLSSRSRNSRIQPAPEKETFSTAASNSSDAGQTE 191
              +   +    ++ +PEE   A+    SR    +PA E      A+  SSDA  T+
Sbjct: 754 EPAASRPEEPEPAESRPEEPEPAE----SRPEEPEPAREGTADQPASVTSSDAASTD 806



>EAY10972.1 on XP_001609315  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1338

 Score = 26.9 bits (58), Expect = 1.1,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 13/25 (52%)

Query: 73   TPVHLSGAPANHDSRPSSTYSSSPS 97
            TP    G P NHD  PS +Y  + +
Sbjct: 1011 TPEGSDGTPCNHDGNPSGSYEENKT 1035



>EAY10972.1 on XP_818394   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1059

 Score = 25.4 bits (54), Expect = 3.0,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 6/85 (7%)

Query: 72  PTPVHLSGAPANHDSRPSSTYSSSPSTPQETEHNIPQRVMQRRQQQEQQQTQQSEEESSN 131
           P P   +    N  S  ++  S    T Q+T  N     MQR  + + Q+ Q   EES+ 
Sbjct: 794 PEPAIATEIAGNSRSEDNAQLSEG-ETSQQTTLNEDNESMQRDSEMQTQELQS--EESTE 850

Query: 132 QYDLRQSVHSKLRYLSQKQPEEDNT 156
             D   S  S   Y +++  EE  T
Sbjct: 851 ATDFEGSSES---YGTEQPVEEGGT 872



>EAY10972.1 on XP_816558   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 813

 Score = 25.4 bits (54), Expect = 3.7,   Method: Composition-based stats.
 Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 7/40 (17%)

Query: 157 AQLSSRSRNSRIQPAPEKETFSTAASNSSDAGQTEGDGKV 196
           A L    + S IQ  P       AAS+S   G+T GDG +
Sbjct: 759 AALQQSRKKSEIQQVP-------AASSSHAVGETTGDGGI 791



>EAY10972.1 on XP_805751   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 784

 Score = 25.0 bits (53), Expect = 4.7,   Method: Composition-based stats.
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 7/43 (16%)

Query: 151 PEEDNTAQLSSRSRNSRIQPAPEKETFSTAASNSSDAGQTEGD 193
           PE    A LSSRS++S  Q        S + S  +D+ QT  D
Sbjct: 734 PEAQQDATLSSRSQHSPAQT-------SESESGPADSKQTSSD 769



>EAY10972.1 on XP_819381   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1046

 Score = 24.3 bits (51), Expect = 7.9,   Method: Composition-based stats.
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)

Query: 98  TPQETEHNIPQRVMQRRQQQEQQQTQQSE-EESSNQYDLRQSVHS 141
           T Q+T  N   + MQR    + Q  Q +E EE +   DL +S  S
Sbjct: 803 TAQQTTLNEDYKSMQRDSDVQPQDPQSAESEELTEATDLERSSES 847



>EAY10972.1 on XP_817719   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1053

 Score = 24.3 bits (51), Expect = 8.1,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 51/132 (38%), Gaps = 7/132 (5%)

Query: 66  IING---ENPTPVHLSGAPANHDS----RPSSTYSSSPSTPQETEHNIPQRVMQRRQQQE 118
           I+NG     P+   ++GA  +  +       +++S   + P E E +    + + ++  +
Sbjct: 768 IVNGPVPAAPSSTLVAGASISESAIAAQSAENSFSEDNAQPSEGETSWQTTLNEAKESMQ 827

Query: 119 QQQTQQSEEESSNQYDLRQSVHSKLRYLSQKQPEEDNTAQLSSRSRNSRIQPAPEKETFS 178
           +    Q ++  S +  +   V         ++PEED      S    S +  +   ET +
Sbjct: 828 RDSDVQPQDLQSEKLTVFSDVEKSSESNDTEEPEEDGGTNDRSGGTTSPVAASLSMETVA 887

Query: 179 TAASNSSDAGQT 190
            + +      Q+
Sbjct: 888 ASVNGEHQVQQS 899



>EAY10972.1 on XP_812339   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 949

 Score = 23.9 bits (50), Expect = 10.0,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 41/111 (36%), Gaps = 14/111 (12%)

Query: 79  GAPANHDSRPSSTYSSSPSTPQETEHNIPQRVMQRRQQQEQQQTQQSEEESSNQYDLRQS 138
           G P+    +P++  + +PS+            +  +QQ EQ   + SE   S    L  S
Sbjct: 745 GTPSPEAIKPATLETRTPSS------------LGGQQQTEQDPLRTSENAGSGS--LSTS 790

Query: 139 VHSKLRYLSQKQPEEDNTAQLSSRSRNSRIQPAPEKETFSTAASNSSDAGQ 189
             S        +  ED +A  +    +S +  A   E   T  + + D  Q
Sbjct: 791 AVSSATTSPAAKESEDQSASGTPPEGHSNVDGASSSEGVQTVDAETGDTVQ 841




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10974.1 hypothetical protein TVAG_446760 [Trichomonas
vaginalis G3]
         (495 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609041  variant erythrocyte surface antigen-1, alpha subun...    29   0.80 
XP_001610568  variant erythrocyte surface antigen-1, alpha subun...    28   1.6  
XP_001608665  variant erythrocyte surface antigen-1, alpha subun...    27   4.7  
AAL38221  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   26   6.8  
XP_001350409  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   7.0  
XP_001609533  variant erythrocyte surface antigen-1, alpha subun...    25   8.3  
XP_001347691  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   8.7  
XP_001610567  variant erythrocyte surface antigen-1, alpha subun...    25   9.5  
XP_818196   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   9.5  

>EAY10974.1 on XP_001609041  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1318

 Score = 28.9 bits (63), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 23/35 (65%)

Query: 136 DKGANESAKKFIEEKKEELNELKKKIKKATKSDKL 170
           DKGA E  K+ +E+ KEEL E  K++K A ++  L
Sbjct: 712 DKGAIEGVKRELEKAKEELVEAVKQVKDAVENCGL 746



>EAY10974.1 on XP_001610568  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1329

 Score = 28.1 bits (61), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 66/139 (47%), Gaps = 30/139 (21%)

Query: 285 IREAIEKVDELQVTLSDAEE----KRNKTFE--KTELEQIKIE--KAYVQLTAAQMKRDQ 336
           +++ +EK+ E+ V L +A+E    K+ +  E  K +LE  K E  KA  +L  A   +D 
Sbjct: 672 LKDVLEKIGEVVVQLGNAQEALEGKKTEAIEGVKKKLEGAKTELGKAKGELETAVNGKDG 731

Query: 337 TFGKVEDLELKKAMLQNMLNEMNYLPDNGSKQILQRIDL---------YDRRCNQISEKI 387
             GK+   E KK ++         L   G   IL+ ++          +D+  N+ISE I
Sbjct: 732 LNGKLA--EAKKKLVA--------LTKGGGSGILKELEGALGAANSNDFDQGKNKISEAI 781

Query: 388 KA---AQEEIQKRRQDIIE 403
                A E ++K  +D+I+
Sbjct: 782 NGVRDALEALEKGVKDLIK 800



>EAY10974.1 on XP_001608665  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1326

 Score = 26.6 bits (57), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 13/27 (48%), Positives = 17/27 (62%)

Query: 147 IEEKKEELNELKKKIKKATKSDKLNSR 173
           IE+ KEEL E K K++ A K D L  +
Sbjct: 727 IEKVKEELTEAKTKLEDAVKKDGLTGK 753



>EAY10974.1 on AAL38221  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2965

 Score = 25.8 bits (55), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 15/99 (15%)

Query: 238  FSVIPDQSKPD-------NSEDEDNELENLNQQIREKTLERDNLIYLNQEKDKQIREAIE 290
            F +I DQ+  D          +  N L+NL  +IR   LE++ ++    +K K+I E  +
Sbjct: 1842 FKIICDQNVNDLLNKLSLGDLNYMNHLKNLQNEIRNMNLEKNFML----DKSKKIDEEEK 1897

Query: 291  KVDELQVTLSDAE---EKRNKTFEKTELEQIKIEKAYVQ 326
            K+D L+V +S+     +K  K +E+   +++K E A +Q
Sbjct: 1898 KLDILKVNISNINNSLDKLKKYYEEALFQKVK-ENAEIQ 1935



>EAY10974.1 on XP_001350409  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2223

 Score = 25.8 bits (55), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 6/56 (10%)

Query: 138 GANESA---KKFIEEKKEELNELKKKIK--KATKSDKLNSRTGDIHSEVLANADLI 188
           G N+     KK+I +KKEE + +KK  K  +A K+   N    D+  E   +AD +
Sbjct: 705 GCNKDCDCFKKWIGKKKEEWDAIKKHFKTQEAFKNGGENGVI-DMFGEAFRSADFV 759



>EAY10974.1 on XP_001609533  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1162

 Score = 25.4 bits (54), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 20/140 (14%)

Query: 278 NQEKDKQIREAIEKVDELQVTLSDAEEK-RNKTFEKTELEQIKIEKAYVQLTAAQMKRDQ 336
           N    K+I++ +E + ++ V L +A+E    K  E     +  +EKA  +L  A  K + 
Sbjct: 629 NGSDAKKIKDVLEAIGQVVVQLGNAQEALEGKDKEAINAVKTALEKAKGELEEAVKKVNG 688

Query: 337 TFGKVEDLELKKAMLQNMLNEMNYLPDNGSKQILQRIDL---------YDRRCNQISEKI 387
                  L++K    +  L  +     NG   IL  +           YD   N+ISE I
Sbjct: 689 ------GLDVKLGEAKTALEALT----NGGSGILGEVGEKLETATNGEYDPGKNKISESI 738

Query: 388 KAAQEEIQKRRQDIIEIRKR 407
              +E +++  + I E++K+
Sbjct: 739 NKVREVLKELEKVIKELKKK 758



>EAY10974.1 on XP_001347691  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2182

 Score = 25.4 bits (54), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 10/23 (43%), Positives = 14/23 (60%)

Query: 353  NMLNEMNYLPDNGSKQILQRIDL 375
            NM+N MN +P +G   +   IDL
Sbjct: 1960 NMVNSMNDIPMSGKNDVYSGIDL 1982



>EAY10974.1 on XP_001610567  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1315

 Score = 25.4 bits (54), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 30/140 (21%), Positives = 69/140 (49%), Gaps = 9/140 (6%)

Query: 271 RDNLIYLNQEKDKQIREAIEKVDELQVTLSDAEEK-RNKTFEKTELEQIKIEKAYVQLTA 329
           R+ L  +N+E   +++E ++ +  + V L +A+E    K  E  E  + K+++A   L  
Sbjct: 661 RETLGKVNEEVALKVKEVLQAIGNVVVQLGNAQEALEGKKKEAIEGVKAKLQEAKEGLDK 720

Query: 330 AQMKRDQTFGKVEDLELKKAMLQNMLNEMNYLPDNGS---KQILQRI-----DLYDRRCN 381
           A+   ++   KV    L    L     +++ L  NG     +++Q++     D +D+  N
Sbjct: 721 ARTALEEAAKKVNGDGLSGNELTKAKTKLDALAKNGGGKLGEVVQKLGKATSDDFDQGKN 780

Query: 382 QISEKIKAAQEEIQKRRQDI 401
           ++S  IK  ++ ++  ++++
Sbjct: 781 ELSNAIKGVRDALEALKEEL 800



>EAY10974.1 on XP_818196   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 841

 Score = 25.4 bits (54), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 24/107 (22%), Positives = 49/107 (45%), Gaps = 10/107 (9%)

Query: 34  LIQELNNQNDKLEEDILLIENEIESMKVKIFQKKAKVSEIKA-EIRKYTSNQNEMMSYNF 92
           +++E  ++++K    +  + N+  S KVK        + +K  +I     N      Y++
Sbjct: 151 VLEECTSEDNK---GVCSMANQAGSQKVKKVHVGRPTTVVKGSDIYMLAGN------YSW 201

Query: 93  TETFNDETTTNALTALKGRVGVLQKNNKDMETETGIIQILISGDKGA 139
           T T ND+     L  +KG V    +N +    +T +I    +G++G+
Sbjct: 202 TLTENDQAGDWGLMLVKGNVSREGENKRIYWNDTYVIPWYYNGNQGS 248




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10983.1 hypothetical protein TVAG_446850 [Trichomonas
vaginalis G3]
         (706 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAL38221  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   27   6.2  
AAL38218  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   27   6.3  
AAL38219  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   27   6.4  
AAL38222  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   27   6.5  

>EAY10983.1 on AAL38221  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2965

 Score = 26.6 bits (57), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 8/64 (12%)

Query: 115  FLQHSMIQNTETAAFLENSITWASDYKVSTIRVYLYAMPKNIVATL-VSDIQSYGYNVEA 173
            FL+H   Q  + A ++EN  T+ ++ ++ + ++     P+N V TL  S++ SY   VE 
Sbjct: 1446 FLRHMNDQKDKAAKYMENIDTYKNNIEIISKQI----NPENYVETLNKSNMYSY---VEK 1498

Query: 174  GNEL 177
             N+L
Sbjct: 1499 ANDL 1502



>EAY10983.1 on AAL38218  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2977

 Score = 26.6 bits (57), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 8/64 (12%)

Query: 115  FLQHSMIQNTETAAFLENSITWASDYKVSTIRVYLYAMPKNIVATL-VSDIQSYGYNVEA 173
            FL+H   Q  + A ++EN  T+ ++ ++ + ++     P+N V TL  S++ SY   VE 
Sbjct: 1450 FLRHMNDQKDKAAKYMENIDTYKNNIEIISKQI----NPENYVETLNKSNMYSY---VEK 1502

Query: 174  GNEL 177
             N+L
Sbjct: 1503 ANDL 1506



>EAY10983.1 on AAL38219  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2969

 Score = 26.6 bits (57), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 8/64 (12%)

Query: 115  FLQHSMIQNTETAAFLENSITWASDYKVSTIRVYLYAMPKNIVATL-VSDIQSYGYNVEA 173
            FL+H   Q  + A ++EN  T+ ++ ++ + ++     P+N V TL  S++ SY   VE 
Sbjct: 1442 FLRHMNDQKDKAAKYMENIDTYKNNIEIISKQI----NPENYVETLNKSNMYSY---VEK 1494

Query: 174  GNEL 177
             N+L
Sbjct: 1495 ANDL 1498



>EAY10983.1 on AAL38222  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2976

 Score = 26.6 bits (57), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 8/64 (12%)

Query: 115  FLQHSMIQNTETAAFLENSITWASDYKVSTIRVYLYAMPKNIVATL-VSDIQSYGYNVEA 173
            FL+H   Q  + A ++EN  T+ ++ ++ + ++     P+N V TL  S++ SY   VE 
Sbjct: 1453 FLRHMNDQKDKAAKYMENIDTYKNNIEIISKQI----NPENYVETLNKSNMYSY---VEK 1505

Query: 174  GNEL 177
             N+L
Sbjct: 1506 ANDL 1509




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY10988.1 hypothetical protein TVAG_446900 [Trichomonas
vaginalis G3]
         (973 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAM47174  Rh4  (Adhesin)  [Plasmodium falciparum]                      33   0.087
AAM47192  Rh4  (Adhesin)  [Plasmodium falciparum]                      33   0.087
AAM47175  Rh4  (Adhesin)  [Plasmodium falciparum]                      33   0.088

>EAY10988.1 on AAM47174  Rh4  (Adhesin)  [Plasmodium falciparum]
          Length = 1711

 Score = 33.1 bits (74), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 29/124 (23%), Positives = 61/124 (49%), Gaps = 14/124 (11%)

Query: 159  YFNAEFLTVDNVITFLNQPKAQDTVPAQVKELISSRQIVSDNEKTIKDLYRQLRNLESIN 218
            +FN  F+   N+   +N  +    V  ++ E+I+S  I++ N+  IKD+Y+Q +N++   
Sbjct: 1283 FFNI-FMKFQNINNDINSKRY--NVQKKITEIINSYDIINYNKNNIKDIYQQFKNIQQQL 1339

Query: 219  RSKDEELDSLTK-----------HYEAAMTNQIQKSQAKIKQLELQISNQKVETIVQIKK 267
             + + +L+ + +           H   ++   +Q  + KI++   +I + K ET + I K
Sbjct: 1340 NTTETQLNHIKQNINHFKYFYESHQTISIVKNMQNEKLKIQEFNKKIQHFKEETQIMINK 1399

Query: 268  KDAP 271
               P
Sbjct: 1400 LIQP 1403



>EAY10988.1 on AAM47192  Rh4  (Adhesin)  [Plasmodium falciparum]
          Length = 1716

 Score = 33.1 bits (74), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 29/124 (23%), Positives = 61/124 (49%), Gaps = 14/124 (11%)

Query: 159  YFNAEFLTVDNVITFLNQPKAQDTVPAQVKELISSRQIVSDNEKTIKDLYRQLRNLESIN 218
            +FN  F+   N+   +N  +    V  ++ E+I+S  I++ N+  IKD+Y+Q +N++   
Sbjct: 1284 FFNI-FMKFQNINNDINSKRY--NVQKKITEIINSYDIINYNKNNIKDIYQQFKNIQQQL 1340

Query: 219  RSKDEELDSLTK-----------HYEAAMTNQIQKSQAKIKQLELQISNQKVETIVQIKK 267
             + + +L+ + +           H   ++   +Q  + KI++   +I + K ET + I K
Sbjct: 1341 NTTETQLNHIKQNINHFKYFYESHQTISIVKNMQNEKLKIQEFNKKIQHFKEETQIMINK 1400

Query: 268  KDAP 271
               P
Sbjct: 1401 LIQP 1404



>EAY10988.1 on AAM47175  Rh4  (Adhesin)  [Plasmodium falciparum]
          Length = 1711

 Score = 33.1 bits (74), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 29/124 (23%), Positives = 61/124 (49%), Gaps = 14/124 (11%)

Query: 159  YFNAEFLTVDNVITFLNQPKAQDTVPAQVKELISSRQIVSDNEKTIKDLYRQLRNLESIN 218
            +FN  F+   N+   +N  +    V  ++ E+I+S  I++ N+  IKD+Y+Q +N++   
Sbjct: 1285 FFNI-FMKFQNINNDINSKRY--NVQKKITEIINSYDIINYNKNNIKDIYQQFKNIQQQL 1341

Query: 219  RSKDEELDSLTK-----------HYEAAMTNQIQKSQAKIKQLELQISNQKVETIVQIKK 267
             + + +L+ + +           H   ++   +Q  + KI++   +I + K ET + I K
Sbjct: 1342 NTTETQLNHIKQNINHFKYFYESHQTISIVKNMQNEKLKIQEFNKKIQHFKEETQIMINK 1401

Query: 268  KDAP 271
               P
Sbjct: 1402 LIQP 1405




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11005.1 hypothetical protein TVAG_409980 [Trichomonas
vaginalis G3]
         (78 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_845136  VSG  (Establishment)  [Trypanosoma brucei]                  26   0.18 
XP_001609666  variant erythrocyte surface antigen-1, alpha subun...    24   1.4  
XP_001351321  PfEMP1  (Establishment)  [Plasmodium falciparum]         22   6.0  

>EAY11005.1 on XP_845136  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 481

 Score = 26.2 bits (56), Expect = 0.18,   Method: Composition-based stats.
 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 33  KDGRVQFRKIKQPLDREGILRKIKLHEDNIAELKKKLEELEKGREL 78
           K    Q ++IK+P   + IL +  LH+  + E K++ E LE  R+L
Sbjct: 349 KPAGTQLKEIKEPAVLKQILSE-TLHDREVREQKQQAELLEAKRQL 393



>EAY11005.1 on XP_001609666  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1269

 Score = 23.9 bits (50), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%)

Query: 41  KIKQPLDR--EGILRKIKLHEDNIAELKKKLEELEKG 75
           K+K+ L +  EG+       +D + E KKKL+EL  G
Sbjct: 641 KVKEALRKAKEGLETAKNGLKDKLEEAKKKLDELTNG 677



>EAY11005.1 on XP_001351321  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3467

 Score = 21.9 bits (45), Expect = 6.0,   Method: Composition-based stats.
 Identities = 9/12 (75%), Positives = 10/12 (83%)

Query: 16   EYIKSGTIPEGF 27
            E +KSGTIPE F
Sbjct: 1298 EELKSGTIPENF 1309




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11007.1 hypothetical protein TVAG_410000 [Trichomonas
vaginalis G3]
         (578 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_820142   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           31   0.18 
XP_819343   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   2.1  
XP_817877   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.5  
XP_817389   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   3.7  
XP_816764   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   5.3  
XP_817820   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   6.4  
ABR92023  MSA-1  (Invasion)  [Babesia bovis]                           25   9.2  
ABR92032  MSA-1  (Invasion)  [Babesia bovis]                           25   9.3  
ABR92033  MSA-1  (Invasion)  [Babesia bovis]                           25   9.7  
ABR92025  MSA-1  (Invasion)  [Babesia bovis]                           25   9.9  
ABR92034  MSA-1  (Invasion)  [Babesia bovis]                           25   9.9  

>EAY11007.1 on XP_820142   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 861

 Score = 31.2 bits (69), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 4/49 (8%)

Query: 366 EDPAAVNNLAKLYEVGEGVEKDEEKAIELYKKASQKGSEVATFNLIRLL 414
           ED AA ++L  LY  GE  ++ E K I LY+K  +KGSE A+  ++ +L
Sbjct: 405 EDDAAASSL--LYNSGENTDEREGKLIALYEK--KKGSEQASPGMVSVL 449



>EAY11007.1 on XP_819343   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 953

 Score = 27.7 bits (60), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 5/50 (10%)

Query: 366 EDPAAVNNLAKLYEVGE-GVEKDEEKAIELYKKASQKGSEVATFNLIRLL 414
           +D AA ++L  LY+  E G + +EEK I LY+K  +KG+E  +  ++ +L
Sbjct: 414 DDDAAASSL--LYKSAESGTDNNEEKLIALYEK--KKGAEDTSLGMVSVL 459



>EAY11007.1 on XP_817877   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 900

 Score = 27.3 bits (59), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 26/67 (38%), Gaps = 8/67 (11%)

Query: 486 EKDMNQARDLFIKCADLDTTNGAYAFAAAKFSQFNARQKYL----ETAVNLGYPPAMLHT 541
           EKD     D    C+ +  T+G   F +  FS    R +YL        N G   A LH 
Sbjct: 495 EKDRPNEND----CSGVKITDGLVGFLSGNFSGNTWRDEYLGVNATVNTNEGAAKATLHA 550

Query: 542 AKISHKS 548
             ++ K 
Sbjct: 551 GGVTFKG 557



>EAY11007.1 on XP_817389   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 792

 Score = 26.9 bits (58), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 11/80 (13%)

Query: 354 DIESIKENAKDEEDPAAVNNLAKLYEVGEGVE--KDEEKAIELYKKASQKGSEVATFNL- 410
           DI  + E  KDE++ AA    + LYE  EG +  K+E+K I LY+K  +KG E  +  L 
Sbjct: 360 DIGPVSE--KDEDEVAAS---SLLYESAEGEDNNKEEDKLIALYEK--KKGGEKPSHGLW 412

Query: 411 -IRLLTSKGNIHEAIKVARK 429
            +RL      + E +   +K
Sbjct: 413 SVRLTEQLKRVKEVLATWKK 432



>EAY11007.1 on XP_816764   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 868

 Score = 26.6 bits (57), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 6/60 (10%)

Query: 354 DIESIKENAKDEEDPAAVNNLAKLYEVGEGVEKDEEKAIELYKKASQKGSEVATFNLIRL 413
           DI  + E A D    AA ++L  LY+  E  + ++EK I LY+K    G    +   +RL
Sbjct: 405 DIGPVSEGADD----AAASSL--LYKSAESGDNNDEKLIALYEKKKNGGKPSHSLWSVRL 458



>EAY11007.1 on XP_817820   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 896

 Score = 26.2 bits (56), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 9/61 (14%)

Query: 354 DIESIKENAKDEEDPAAVNNLAKLYEVGEGVEKDEEKAIELYKKASQKGSEVATFNLIRL 413
           DI  I  + +DEED AA + L K      G + +EEK I LY+K  ++G+  ++  ++ +
Sbjct: 477 DIGPI--SGEDEEDVAASSLLYK-----SGKDNNEEKLIALYEK--KRGNGRSSLGMVSV 527

Query: 414 L 414
           L
Sbjct: 528 L 528



>EAY11007.1 on ABR92023  MSA-1  (Invasion)  [Babesia bovis]
          Length = 319

 Score = 25.4 bits (54), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 6/63 (9%)

Query: 384 VEKDEEKAIELYKKASQKGSEVATFNLIRLLTSKGNIHEAIKVARKEYRTTNNSKSAFEL 443
           VE+D EKA+E +KK    G  V   N +      G   E +  A   Y+    S  AF  
Sbjct: 153 VEEDREKAVEYFKKHVYTGEHVVDVNGM-----AGVCKEFLSPASDFYKLV-ESFDAFAH 206

Query: 444 AKV 446
           AKV
Sbjct: 207 AKV 209



>EAY11007.1 on ABR92032  MSA-1  (Invasion)  [Babesia bovis]
          Length = 319

 Score = 25.4 bits (54), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 6/63 (9%)

Query: 384 VEKDEEKAIELYKKASQKGSEVATFNLIRLLTSKGNIHEAIKVARKEYRTTNNSKSAFEL 443
           VE+D EKA+E +KK    G  V   N +      G   E +  A   Y+    S  AF  
Sbjct: 153 VEEDREKAVEYFKKHVYTGEHVVDVNGM-----AGVCKEFLSPASDFYKLV-ESFDAFAH 206

Query: 444 AKV 446
           AKV
Sbjct: 207 AKV 209



>EAY11007.1 on ABR92033  MSA-1  (Invasion)  [Babesia bovis]
          Length = 319

 Score = 25.4 bits (54), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 6/63 (9%)

Query: 384 VEKDEEKAIELYKKASQKGSEVATFNLIRLLTSKGNIHEAIKVARKEYRTTNNSKSAFEL 443
           VE+D EKA+E +KK    G  V   N +      G   E +  A   Y+    S  AF  
Sbjct: 153 VEEDREKAVEYFKKHVYTGEHVVDVNGM-----AGVCKEFLSPASDFYKLV-ESFDAFAH 206

Query: 444 AKV 446
           AKV
Sbjct: 207 AKV 209



>EAY11007.1 on ABR92025  MSA-1  (Invasion)  [Babesia bovis]
          Length = 319

 Score = 25.4 bits (54), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 6/63 (9%)

Query: 384 VEKDEEKAIELYKKASQKGSEVATFNLIRLLTSKGNIHEAIKVARKEYRTTNNSKSAFEL 443
           VE+D EKA+E +KK    G  V   N +      G   E +  A   Y+    S  AF  
Sbjct: 153 VEEDREKAVEYFKKHVYTGEHVVDVNGM-----AGVCKEFLSPASDFYKLV-ESFDAFAH 206

Query: 444 AKV 446
           AKV
Sbjct: 207 AKV 209



>EAY11007.1 on ABR92034  MSA-1  (Invasion)  [Babesia bovis]
          Length = 319

 Score = 25.4 bits (54), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 6/63 (9%)

Query: 384 VEKDEEKAIELYKKASQKGSEVATFNLIRLLTSKGNIHEAIKVARKEYRTTNNSKSAFEL 443
           VE+D EKA+E +KK    G  V   N +      G   E +  A   Y+    S  AF  
Sbjct: 153 VEEDREKAVEYFKKHVYTGEHVVDVNGM-----AGVCKEFLSPASDFYKLV-ESFDAFAH 206

Query: 444 AKV 446
           AKV
Sbjct: 207 AKV 209




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11009.1 hypothetical protein TVAG_410020 [Trichomonas
vaginalis G3]
         (355 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_966305  PfEMP1  (Establishment)  [Plasmodium falciparum]            28   0.70 
AAW71459  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]          28   1.1  
AAW71460  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]          28   1.1  
AAW71463  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]          28   1.1  
AAW71461  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]          28   1.2  
AAW71462  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]          28   1.2  
XP_827747  VSG  (Establishment)  [Trypanosoma brucei]                  27   1.9  
XP_001349033  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   2.9  
XP_001347692  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   3.0  
XP_001609101  variant erythrocyte surface antigen-1, alpha subun...    25   6.3  
XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 25   7.4  
XP_001609163  variant erythrocyte surface antigen-1, alpha subun...    25   9.6  

>EAY11009.1 on XP_966305  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3954

 Score = 28.5 bits (62), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 44/102 (43%), Gaps = 9/102 (8%)

Query: 210  EFDRRSSELHEYENIITEFESDWEELKADDIYSYEAKMQK--LNWLLDQSNNANTLLLQI 267
            E D  S   +E    IT  ES++EEL  +DIY Y++   K  +  +L+ S N        
Sbjct: 3510 EGDSDSGHYYEDTTDITSSESEYEELDINDIYPYKSPKYKTLIEVVLEPSGNNTPTSDTP 3569

Query: 268  DDINQKIFDSNLKLDELKDQRSHLLK-------INSTKYNDV 302
             D    I   +   ++L D   + LK       I S + NDV
Sbjct: 3570 SDTQNDIPSGDTPNNKLTDNEWNTLKDEFISQYIQSEQPNDV 3611



>EAY11009.1 on AAW71459  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]
          Length = 448

 Score = 27.7 bits (60), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 2/50 (4%)

Query: 173 EESYTQEETSEISPSECSFEEDAIENDITDSLFLKCDEFDRRSSELHEYE 222
           E  +  +  S+I P+ C      +  DI D+ F+  D F R+   + +YE
Sbjct: 390 EPEFYMDPLSDIDPALCMLY--ILPVDIDDNTFILGDPFMRKYFTVFDYE 437



>EAY11009.1 on AAW71460  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]
          Length = 448

 Score = 27.7 bits (60), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 2/50 (4%)

Query: 173 EESYTQEETSEISPSECSFEEDAIENDITDSLFLKCDEFDRRSSELHEYE 222
           E  +  +  S+I P+ C      +  DI D+ F+  D F R+   + +YE
Sbjct: 390 EPEFYMDPLSDIDPALCMLY--ILPVDIDDNTFILGDPFMRKYFTVFDYE 437



>EAY11009.1 on AAW71463  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]
          Length = 448

 Score = 27.7 bits (60), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 2/50 (4%)

Query: 173 EESYTQEETSEISPSECSFEEDAIENDITDSLFLKCDEFDRRSSELHEYE 222
           E  +  +  S+I P+ C      +  DI D+ F+  D F R+   + +YE
Sbjct: 390 EPEFYMDPLSDIDPALCMLY--ILPVDIDDNTFILGDPFMRKYFTVFDYE 437



>EAY11009.1 on AAW71461  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]
          Length = 448

 Score = 27.7 bits (60), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 2/50 (4%)

Query: 173 EESYTQEETSEISPSECSFEEDAIENDITDSLFLKCDEFDRRSSELHEYE 222
           E  +  +  S+I P+ C      +  DI D+ F+  D F R+   + +YE
Sbjct: 390 EPEFYMDPLSDIDPALCMLY--ILPVDIDDNTFILGDPFMRKYFTVFDYE 437



>EAY11009.1 on AAW71462  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]
          Length = 448

 Score = 27.7 bits (60), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 2/50 (4%)

Query: 173 EESYTQEETSEISPSECSFEEDAIENDITDSLFLKCDEFDRRSSELHEYE 222
           E  +  +  S+I P+ C      +  DI D+ F+  D F R+   + +YE
Sbjct: 390 EPEFYMDPLSDIDPALCMLY--ILPVDIDDNTFILGDPFMRKYFTVFDYE 437



>EAY11009.1 on XP_827747  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 509

 Score = 26.9 bits (58), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 19/133 (14%)

Query: 13  KVNSKMRTSTDLLHREILKIRINQCTRKKELNTRKQKIN-EYKKTTDSYRKAVVL----- 66
            V  K + +TD       K    +  + K+ N R  K+  E  K T SY ++  L     
Sbjct: 103 PVPCKGKAATDPCKSHWKKWETAK-VKAKDNNIRPDKLKLEEVKLTSSYGRSAALQVASL 161

Query: 67  LKLSHKVEK---------MSQMRNKIHDHLHKYELQLNNIE---NHNYNSEIDEIRQKKT 114
           L+ + K++K         ++ ++  +   L+K    ++ +    NH  N ++D  RQK  
Sbjct: 162 LEEAEKLKKNWETNHKAHVTGLKAAVTTLLNKAAYNVDPVPAQSNHKCNVKVDTSRQKTC 221

Query: 115 DLQRKRDMIIAKL 127
           +L +  + I   L
Sbjct: 222 ELPKAGEAICGAL 234



>EAY11009.1 on XP_001349033  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2064

 Score = 26.6 bits (57), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 4/43 (9%)

Query: 208  CD-EFDRRSSELHEYENIITEFESDWEE--LKADDIYSYEAKM 247
            CD E +   S+  +YE  IT+++S WE+   K D +Y+ EAK+
Sbjct: 1468 CDSECETCKSQCGQYEKFITQWKSQWEKQSGKYDKLYA-EAKV 1509



>EAY11009.1 on XP_001347692  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2994

 Score = 26.6 bits (57), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 15/40 (37%), Positives = 22/40 (55%)

Query: 210  EFDRRSSELHEYENIITEFESDWEELKADDIYSYEAKMQK 249
            E D  S   +E    IT  ES++EEL  ++IY Y++   K
Sbjct: 2620 EGDSDSGHYYEDTTDITSSESEYEELDINEIYPYQSPKYK 2659



>EAY11009.1 on XP_001609101  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1359

 Score = 25.4 bits (54), Expect = 6.3,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 10/72 (13%)

Query: 121 DMIIAKLKEKADALEELKK-IEIDTEKMQNEVNLLSQKKEFLENKISSMKNAEEESYTQE 179
           + ++  +KEK  ALEE+KK +E   EK++       + +E LE     ++ A+    T +
Sbjct: 727 EKLVEGVKEKVKALEEIKKTLEAAKEKLEEA----KKTQEALEAAKGELEGAKGALTTAK 782

Query: 180 E-----TSEISP 186
           +     +S+I P
Sbjct: 783 KAFPGSSSDIDP 794



>EAY11009.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 25.4 bits (54), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 49/163 (30%)

Query: 100  HNYNSEIDEIRQKKTDLQRKRDMIIAKLKEKADALEELKKIEIDTEKMQNEVNLLSQKKE 159
            HN N+++D++  K+ +LQ                   L  I    EK++N ++ L    E
Sbjct: 1330 HNNNTQVDKL--KEINLQ---------------VFSNLGNIIKYVEKLENTLHELKDMYE 1372

Query: 160  FLE----NKI-----SSMKNAEEESYTQEETSE-------------------ISPSECSF 191
            FLE    NKI     +SMK +EE S   ++  E                   I+P+  S 
Sbjct: 1373 FLETIDINKILKSIHNSMKKSEEYSNETKKIFEQSVNITNQFIEDVEILKTSINPNYESL 1432

Query: 192  EEDAIENDITDSLFLKCDEFDRRSSELHEYENIITEFESDWEE 234
             +D I+++I  SL LK +E   +  ++++Y   IT+ ES+ E+
Sbjct: 1433 NDDQIDDNIK-SLVLKKEEISEKRKQVNKY---ITDIESNKEQ 1471



>EAY11009.1 on XP_001609163  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1360

 Score = 24.6 bits (52), Expect = 9.6,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 10/66 (15%)

Query: 127 LKEKADALEELKK-IEIDTEKMQNEVNLLSQKKEFLENKISSMKNAEEESYTQEE----- 180
           +KEK  ALEE+KK +E   EK++       + +E LE     ++ A+    T ++     
Sbjct: 733 VKEKVKALEEIKKTLEAAKEKLEEA----KKTQEALEAAKGELEGAKGALTTAKKAFPGS 788

Query: 181 TSEISP 186
           +S+I P
Sbjct: 789 SSDIDP 794




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11010.1 Glycosyl hydrolase family 3 N terminal domain
containing protein [Trichomonas vaginalis G3]
         (474 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_813421   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   1.7  
XP_804800   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.6  
XP_001348165  RESA  (Others)  [plasmodium falciparum]                  27   4.3  
XP_001349032  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   4.3  
XP_001351318  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   4.8  
XP_846273  VSG  (Establishment)  [Trypanosoma brucei]                  26   6.4  

>EAY11010.1 on XP_813421   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 746

 Score = 27.7 bits (60), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 21  YSYNQYNLPSLISIDQESGSNIRMFRNSTVFPSSMTIAATNNLENAYKSSYL 72
           +SY      SL  +    GS I+M   + VFP   T  A NN E+  K++ +
Sbjct: 241 WSYKVKQHESLTQLTNGGGSGIKMNDGTLVFPVEATKKA-NNKEDEVKTTTV 291



>EAY11010.1 on XP_804800   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 940

 Score = 27.3 bits (59), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 21  YSYNQYNLPSLISIDQESGSNIRMFRNSTVFPSSMTIAATNNLENAYKSSYL 72
           +SY      SL  +    GS I+M   + VFP   T  A NN E+  K++ +
Sbjct: 233 WSYKVKQHESLTQLTNGGGSGIKMNDGTLVFPVEATKKA-NNKEDEVKTTTV 283



>EAY11010.1 on XP_001348165  RESA  (Others)  [plasmodium falciparum]
          Length = 1085

 Score = 26.6 bits (57), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 8/68 (11%)

Query: 344 YMLEEYIKESFCTRLSKIINLKKYVFDKKVSQNDKDQINILAKENKTTIFVPYKSRWNKE 403
           Y+L    K    T   +I+ L ++ F+K++S ND         ENK+   + +  ++ KE
Sbjct: 603 YLLSSLEKFKDFTGTPQIVTLLRFFFEKRLSMND--------LENKSEHLLKFMEQYQKE 654

Query: 404 QIQVIKEY 411
           +   + EY
Sbjct: 655 REAHVSEY 662



>EAY11010.1 on XP_001349032  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2267

 Score = 26.6 bits (57), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 3/58 (5%)

Query: 212 GVTITDSMVMKAIKQEKYNETILEAILAGADLICSCGKVFEPFQYYTIDYLMECVEKG 269
           G TI    ++K+ ++EK  ET L+A     D   S   +++P+Q Y I  L +  ++G
Sbjct: 540 GTTI---KILKSGEEEKDIETKLKAFCDNKDSGNSDPSLYDPWQCYQIGELTKDQKEG 594



>EAY11010.1 on XP_001351318  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2169

 Score = 26.2 bits (56), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 9/68 (13%)

Query: 13   NLTATIQNYSYNQYNLPSLISIDQESGSNIRMFRNSTVFPSSMTIAATNNLENAYKSSYL 72
            N TA+  N + +  N PS    D          +N  +  S +T    N L++ + S YL
Sbjct: 1851 NTTASGNNTTASGKNTPSDTQND---------IQNDDIPSSKITDNEWNTLKHDFISQYL 1901

Query: 73   QALELNDV 80
            Q+ + NDV
Sbjct: 1902 QSEQPNDV 1909



>EAY11010.1 on XP_846273  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 490

 Score = 25.8 bits (55), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 14/76 (18%)

Query: 186 TPLDETMPCSTSSKCINYLRNELG-------------YEGVTITDSMVMKAIKQEKYNET 232
           T  D   PCST+  C   L   LG             ++ +   +S+++ A      + T
Sbjct: 20  TSADANKPCSTACGCKKRLHARLGLYTTKLKEAKQTNHQNLKEYNSLLLAAAVGSPLDTT 79

Query: 233 ILEAILAG-ADLICSC 247
           I+  ILAG  +LI  C
Sbjct: 80  IILPILAGSGELIQQC 95




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11012.1 hypothetical protein TVAG_410050 [Trichomonas
vaginalis G3]
         (353 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001610497  variant erythrocyte surface antigen-1, alpha subun...    28   1.4  

>EAY11012.1 on XP_001610497  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1315

 Score = 27.7 bits (60), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 14/62 (22%)

Query: 203 VTGKSGNLKEA-SRLKQMLEEMIEQ-------------EKAQNREEWKAVFHIERDELEK 248
           V GK G   +A S+ K+ LE +                EKA N EEWK  +   +D++  
Sbjct: 719 VNGKDGQTSQAISKAKKALEALTNGGSGALHTLVSDGLEKAANGEEWKKDYSSAKDKISA 778

Query: 249 SL 250
           ++
Sbjct: 779 AI 780




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11013.1 viral A-type inclusion protein, putative
[Trichomonas vaginalis G3]
         (2458 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001611365  variant erythrocyte surface antigen-1, alpha subun...    31   1.2  
XP_001608665  variant erythrocyte surface antigen-1, alpha subun...    30   2.6  
XP_001351563  PfEMP1  (Establishment)  [Plasmodium falciparum]         29   5.2  
XP_001347691  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   8.2  

>EAY11013.1 on XP_001611365  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1335

 Score = 30.8 bits (68), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/94 (26%), Positives = 49/94 (52%), Gaps = 13/94 (13%)

Query: 1679 LNKKLNELSKSNDEKQKKIEELEQKLQESQNNK------DEEEENIEDLKEQLEQLRRDA 1732
            L+ KL EL+ +       +++LE KL  +   K      +E  + I  + E L+++    
Sbjct: 745  LDGKLGELTGNGGGSSGILKDLEGKLDTATGGKEVDPGKNEVSKAIHKVWEVLKEME--- 801

Query: 1733 ITKSKQDQEEIENLKKQIEEKEADIEEITEELEQ 1766
                KQ +E ++N+K +IE+ E+D+++ T  + Q
Sbjct: 802  ----KQLKEVLKNIKDEIEQYESDMDDNTGRIIQ 831



>EAY11013.1 on XP_001608665  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1326

 Score = 29.6 bits (65), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 1/119 (0%)

Query: 1662 ENTETENIENLKSEIEELNKKLNELSKSNDEKQKKIEELEQKLQESQNNKDEEEENIEDL 1721
            E  +TE IE +K E+ E   KL +  K  D    K+ E  +KL+   NN   ++  +  L
Sbjct: 720  EGKKTEAIEKVKEELTEAKTKLEDAVK-KDGLTGKLAEATKKLEALTNNGGGDKGALHIL 778

Query: 1722 KEQLEQLRRDAITKSKQDQEEIENLKKQIEEKEADIEEITEELEQLRKDSITKAKQDQE 1780
             +          T SK+  ++  + K +I    + + E+ E ++   K  I K K  +E
Sbjct: 779  VDSGPGSLHQVATASKEYDKDYSSGKDRISAAISGVREVLELIKGWAKGEIEKQKTAKE 837



>EAY11013.1 on XP_001351563  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2149

 Score = 28.9 bits (63), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 7/94 (7%)

Query: 1147 EISDLKNEISQLQQKEEENGSDLQKQIEV---LKQTNEKNDEDIEQLAKQIDELQTEKEK 1203
            E   L N +    +K+ ENG+DL++ IE+   LK+  +   +D  ++  +I        K
Sbjct: 1374 ECDKLCNSVVCFLKKKNENGTDLKQYIEIRALLKRWVDNFFDDYNKIKHKISHCINSGNK 1433

Query: 1204 QNEEINDLKSQLQNVSEIKSENEKQKNEIDDLKK 1237
                 ND  ++ + V   +   EK+KNE +++KK
Sbjct: 1434 ST-CTNDCPNKCKCV---RKWIEKKKNEWEEIKK 1463



>EAY11013.1 on XP_001347691  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2182

 Score = 28.1 bits (61), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 14/49 (28%), Positives = 25/49 (51%)

Query: 1344 ELKSENESLKKQIEELKEQLKQKEDQGQEENGWGDENETEDYKSQISAL 1392
            E+K++ E +K+ I++  E   +K D G   + W + N    +   I AL
Sbjct: 1119 EMKAKEEKIKEAIQKFFENGDKKPDGGTTPSSWWNNNAKHIWNGMICAL 1167




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11015.1 hypothetical protein TVAG_410120 [Trichomonas
vaginalis G3]
         (186 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001611901  variant erythrocyte surface antigen-1, alpha subun...    27   0.88 
XP_001351575  RAP2  (Invasion)  [Plasmodium falciparum]                25   2.1  
XP_821526   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   2.5  
XP_001350935  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   2.9  
XP_001351561  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   7.8  
XP_001348946  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   7.8  
XP_819719   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   9.6  
XP_807804   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   9.8  

>EAY11015.1 on XP_001611901  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1211

 Score = 26.9 bits (58), Expect = 0.88,   Method: Composition-based stats.
 Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 2/25 (8%)

Query: 58  HSY--QYRSILSMTLIMHRYWERFK 80
           HSY  +YRS  +M LI  +YW   K
Sbjct: 246 HSYIMRYRSTYTMELIDAKYWTEIK 270



>EAY11015.1 on XP_001351575  RAP2  (Invasion)  [Plasmodium falciparum]
          Length = 398

 Score = 25.4 bits (54), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 10/29 (34%), Positives = 17/29 (58%)

Query: 15  SRSITDHKAQIEKTDASRFAKRYSLPELK 43
           ++ +  HK  + + D + F K YS+P LK
Sbjct: 302 TKMLNSHKTFLRQFDYALFHKTYSIPNLK 330



>EAY11015.1 on XP_821526   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 983

 Score = 25.4 bits (54), Expect = 2.5,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 17/25 (68%)

Query: 82  YLDRNERLTCIQKVMRDGKEQDAIV 106
           +LD  ERL  ++KV+   KE+DA +
Sbjct: 454 FLDLTERLEDVRKVLAAWKEKDAYI 478



>EAY11015.1 on XP_001350935  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2268

 Score = 25.4 bits (54), Expect = 2.9,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 3/33 (9%)

Query: 137 EQKHSRADDLKDLDKALVRLSEPSPEEPSQPSP 169
           E     ++D  D ++A V    P PEEP +P P
Sbjct: 825 ENHQEESEDKDDANEAAV---VPQPEEPQEPVP 854



>EAY11015.1 on XP_001351561  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3553

 Score = 23.9 bits (50), Expect = 7.8,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 18/39 (46%)

Query: 144  DDLKDLDKALVRLSEPSPEEPSQPSPFWEEDPSDSFFEE 182
            D+LK++ K    +    P+ P Q SP    D  D   EE
Sbjct: 2969 DNLKNIIKTCQNVPSGKPDTPCQKSPAPVGDDDDPLEEE 3007



>EAY11015.1 on XP_001348946  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3553

 Score = 23.9 bits (50), Expect = 7.8,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 18/39 (46%)

Query: 144  DDLKDLDKALVRLSEPSPEEPSQPSPFWEEDPSDSFFEE 182
            D+LK++ K    +    P+ P Q SP    D  D   EE
Sbjct: 2969 DNLKNIIKTCQNVPSGKPDTPCQKSPAPVGDDDDPLEEE 3007



>EAY11015.1 on XP_819719   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1053

 Score = 23.5 bits (49), Expect = 9.6,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 17/25 (68%)

Query: 82  YLDRNERLTCIQKVMRDGKEQDAIV 106
           +LD  E+L  ++KV+   KE+DA +
Sbjct: 455 FLDLTEKLKDVKKVLAAWKEKDAYI 479



>EAY11015.1 on XP_807804   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1054

 Score = 23.5 bits (49), Expect = 9.8,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 17/25 (68%)

Query: 82  YLDRNERLTCIQKVMRDGKEQDAIV 106
           +LD  E+L  ++KV+   KE+DA +
Sbjct: 456 FLDLTEKLKDVKKVLAAWKEKDAYI 480




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11030.1 hypothetical protein TVAG_410300 [Trichomonas
vaginalis G3]
         (349 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]                 34   0.016
XP_804330   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   0.57 
XP_810574   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   3.9  
XP_001347691  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   4.4  
XP_846273  VSG  (Establishment)  [Trypanosoma brucei]                  25   5.4  
ABR92024  MSA-1  (Invasion)  [Babesia bovis]                           25   7.3  
XP_001349034  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   8.2  

>EAY11030.1 on XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]
          Length = 2112

 Score = 33.9 bits (76), Expect = 0.016,   Method: Composition-based stats.
 Identities = 17/43 (39%), Positives = 20/43 (46%)

Query: 11  TKLADAMTQIVSNEEPAPEEQKEEQQPENPPEPPQSAPSPTPE 53
           TK+   +    S E P PEE  E  +  NP E P     PTPE
Sbjct: 485 TKILTKICNTGSVELPKPEENPEPVEKPNPEENPNPVEKPTPE 527



>EAY11030.1 on XP_804330   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 910

 Score = 28.9 bits (63), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 6/80 (7%)

Query: 14  ADAMTQIVSNEEPAPEEQKEEQQPENPPEPPQSAPSPTPEPVMDAASTTSAATEQPKTEM 73
           A A+T   S+ EP       E QP   P P  + P PT +  ++ +S  S        E+
Sbjct: 702 AKALTTTSSSVEPLTTSVTTETQP-TVPSPTPAGPQPTEQATLNGSSVPSGGAPSTPEEL 760

Query: 74  -----TKEEVDELINDAKQG 88
                T  E++   + A++G
Sbjct: 761 NAATSTPAELNAATSSAREG 780



>EAY11030.1 on XP_810574   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 954

 Score = 26.2 bits (56), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 16/90 (17%)

Query: 14  ADAMTQIVSNEEPAPEEQKEEQQPENPPEPPQSAPSPTPEPVMDAASTTS---------- 63
           A A+T      EP       E QP   P P  + P PT +  ++ +S  S          
Sbjct: 735 AKALTTTSPPVEPLTTSVTTEMQP-TVPSPATAGPQPTEQATLNGSSVPSGGAPSTPEEL 793

Query: 64  -AATEQPK----TEMTKEEVDELINDAKQG 88
            AAT  P+       T EE++   + A++G
Sbjct: 794 NAATSTPEELNAATSTPEELNAATSSAREG 823



>EAY11030.1 on XP_001347691  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2182

 Score = 25.8 bits (55), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 4/71 (5%)

Query: 9    TDTKLADAMTQIVSNEEPAPEEQKEEQQPENPPEPPQSAPSPTPEPVMDAASTTSAATEQ 68
            +D   A      + +E+ + EE+   +QP+  P+PP+  P    +   D A TT   T  
Sbjct: 1657 SDCNTAPTSDTTLDDEDLSLEEENTVEQPKFCPKPPE--PKAEEKGACDPAPTTPKETAS 1714

Query: 69   P--KTEMTKEE 77
            P    E TKE 
Sbjct: 1715 PADSGEGTKEH 1725



>EAY11030.1 on XP_846273  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 490

 Score = 25.4 bits (54), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)

Query: 133 RLLANQKAVTEKREAKIQELVQKRDECQADLDKLSKSWENKLADFDAQIK 182
           RL A  K + EK++AK  + V K  +C    +K ++  +N   D DA+ K
Sbjct: 375 RLFA--KEIKEKKQAKTTQKVSKTTDCNKQTEKTAEECKNLGCDHDAENK 422



>EAY11030.1 on ABR92024  MSA-1  (Invasion)  [Babesia bovis]
          Length = 330

 Score = 25.0 bits (53), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 1/60 (1%)

Query: 15  DAMTQIVSNEEPAPEEQKEEQQPENPPEPPQSAPSPTPEPVMDAASTTSAATEQPKTEMT 74
           +A  ++VS  E A  + K    PEN   P Q+AP  + EP       T+ A  QP    T
Sbjct: 223 EAPKELVSAIEEAVAKIKAPTNPENTELPAQAAPGAS-EPTSPGGQPTAPAAPQPGASAT 281



>EAY11030.1 on XP_001349034  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2215

 Score = 25.0 bits (53), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 24   EEPAPEEQKEEQQPENPPEPPQSAPSPTPEPVMDAASTTSAA 65
            E+P P+   +   P NP E P   P+     +M +     AA
Sbjct: 1717 EKPVPKPPSQPTNPPNPFEHPAVIPALMSSTIMWSVGIGFAA 1758




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11031.1 hypothetical protein TVAG_410310 [Trichomonas
vaginalis G3]
         (378 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001610497  variant erythrocyte surface antigen-1, alpha subun...    29   0.66 
XP_001609754  variant erythrocyte surface antigen-1, alpha subun...    27   2.2  
AAY44838  MSA-1  (Invasion)  [Babesia bovis]                           26   2.8  
AAY44835  MSA-1  (Invasion)  [Babesia bovis]                           26   3.1  

>EAY11031.1 on XP_001610497  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1315

 Score = 28.9 bits (63), Expect = 0.66,   Method: Composition-based stats.
 Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 3/52 (5%)

Query: 256 ESRTNSEAWQLDYNQALDKLQQKHKR---ELETFEFQSNIQFTSLKQKRETL 304
           E   N E W+ DY+ A DK+    K     LE      +   + LK+ +ETL
Sbjct: 757 EKAANGEEWKKDYSSAKDKISAAIKAVRDALEGLLLLKDAGASGLKENKETL 808



>EAY11031.1 on XP_001609754  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1295

 Score = 26.9 bits (58), Expect = 2.2,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 11/71 (15%)

Query: 104 EQVLSILKQQKKDAVAKKRFVDSMESQEAIEYVNNHYKNAIK--EEGEQEIDSEFQGKMD 161
           +QV S L++ KKD  + K         + I  V N  ++ +   E+G  +++ +  G  D
Sbjct: 760 QQVGSELQKWKKDYSSAK---------DRISEVINKVRDVLTVLEKGLPQVNGQLNGHKD 810

Query: 162 TYYESLKKFDD 172
            + +++KK +D
Sbjct: 811 EFTKAIKKLED 821



>EAY11031.1 on AAY44838  MSA-1  (Invasion)  [Babesia bovis]
          Length = 266

 Score = 26.2 bits (56), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%)

Query: 71  VRRHNQFTQQDIQKFLNCAYEKKPLWNLEPEQYEQVLSILKQQKK-DAVAKKRFVDSMES 129
           ++  NQFT      F+  A E K +          V+ I  + K  D VAK+ F    E 
Sbjct: 96  LKDDNQFTSDG---FVTSAEEAKKVDGDFDTLMGSVIQIYHKCKALDEVAKRLFSGGEER 152

Query: 130 QEAIEYVNNHYKNAIKEEGEQE 151
           +E IE +  ++KN +  +G+ E
Sbjct: 153 KENIEEMKTYFKNNVYNKGDVE 174



>EAY11031.1 on AAY44835  MSA-1  (Invasion)  [Babesia bovis]
          Length = 270

 Score = 26.2 bits (56), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%)

Query: 71  VRRHNQFTQQDIQKFLNCAYEKKPLWNLEPEQYEQVLSILKQQKK-DAVAKKRFVDSMES 129
           ++  NQFT      F+  A E K +          V+ I  + K  D VAK+ F    E 
Sbjct: 96  LKDDNQFTSDG---FVTSAEEAKKVDGDFDTLMGSVIQIYHKCKALDEVAKRLFSGGEER 152

Query: 130 QEAIEYVNNHYKNAIKEEGEQE 151
           +E IE +  ++KN +  +G+ E
Sbjct: 153 KENIEEMKTYFKNNVYNKGDVE 174




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11036.1 Beige/BEACH domain containing protein
[Trichomonas vaginalis G3]
         (436 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11038.1 hypothetical protein TVAG_410410 [Trichomonas
vaginalis G3]
         (444 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001608668  variant erythrocyte surface antigen-1, alpha subun...    31   0.14 
XP_827743  VSG  (Establishment)  [Trypanosoma brucei]                  25   6.6  

>EAY11038.1 on XP_001608668  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1337

 Score = 31.2 bits (69), Expect = 0.14,   Method: Composition-based stats.
 Identities = 45/206 (21%), Positives = 86/206 (41%), Gaps = 30/206 (14%)

Query: 136 EQQYEEEGENDDMNHLRDQITSLIKEKMELQEQLDDSFEKQKETEDSLSSQAQILKKHFE 195
           E   +EE + +++  +   I S++ +    QE L+   E         S   + +K+   
Sbjct: 675 EGNKDEEADGEELFDVLKAIGSVVVQLGNAQEALEGKAE---------SKVIEGVKQKLG 725

Query: 196 EALAQNKELALKNQQQASQIQLFGTQVRIAQTQIEQDKSEKDQLNARNAQLLQEIARLKQ 255
           EA    KEL    +   S++ + G ++  A+  +E+ K+E D  N R A+L +++  L+ 
Sbjct: 726 EA---KKELEKAKEAVESEVGMDGKELEEAKKAVEKAKTEGD--NVRMAKLEKKMKALE- 779

Query: 256 SSPKNDGATNSNDLSSKIIELSTKNVSLQN-ENAQLQAKITELQDQIEEKDFGYEEDYES 314
                    N+ D  +K++     N +L    N      + ++     EKD     DY S
Sbjct: 780 ---------NAKDALNKLMTSGGSNGALNTLANGGGNGSLQQI-GSANEKD----RDYSS 825

Query: 315 RIETLEKVIENMRDKLNYLENLNKNS 340
             + +   I  +   L  L+ L + S
Sbjct: 826 AKDQISDAINGINQTLEALQLLKRAS 851



>EAY11038.1 on XP_827743  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 503

 Score = 25.4 bits (54), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 1/79 (1%)

Query: 15  KYEELANIGLRSSPNDFDEEEEQSELEESIQLVREAKKYVTLYIMEKRKVAALEQELESV 74
           K+  LA   L +   +F   E  +E  E+I++  E+   +T +    +K  A E+EL + 
Sbjct: 340 KHTRLAATALINRAKNFRAAEGLAERIETIKIQTESTFQLTQFTFPTQKAEAAEEELTTS 399

Query: 75  YQKLTNNAKEVITL-QNEC 92
             K  NN K   T  +N+C
Sbjct: 400 KNKDCNNHKTNSTCTENKC 418




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11053.1 hypothetical protein TVAG_044770 [Trichomonas
vaginalis G3]
         (1384 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11055.1 hypothetical protein TVAG_044790 [Trichomonas
vaginalis G3]
         (137 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001350798  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   1.9  
Q27893   NTPase1  (Establishment)  [Toxoplasma gondii]                 25   2.1  
XP_807074   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   2.5  
XP_803882   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   4.2  
Q27895  NTPase2  (Establishment)  [Toxoplasma gondii]                  23   5.5  
AAB60238  Tams1  (Invasion)  [Theileria annulata]                      23   9.0  

>EAY11055.1 on XP_001350798  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2359

 Score = 25.0 bits (53), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 5/42 (11%)

Query: 16   AWEGVDFNFENTDPYAN-----SEFFDSDSSQHTPYFAFNLI 52
             + G+D   +N DPY++     S   D  S  H PY   +LI
Sbjct: 2119 VYSGIDPTSDNRDPYSDKKDPISGTKDPISDNHHPYSGIDLI 2160



>EAY11055.1 on Q27893   NTPase1  (Establishment)  [Toxoplasma gondii]
          Length = 255

 Score = 24.6 bits (52), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 10/25 (40%), Positives = 17/25 (68%)

Query: 112 NNLPGVPHKAQKRIKIIKRHNQTIK 136
           ++L GV    +KRI + K+H QT++
Sbjct: 29  SSLRGVDADTEKRINVGKKHLQTLR 53



>EAY11055.1 on XP_807074   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 822

 Score = 24.6 bits (52), Expect = 2.5,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 14/29 (48%)

Query: 109 LCPNNLPGVPHKAQKRIKIIKRHNQTIKY 137
           LCPN           R+++ KR N T+ +
Sbjct: 24  LCPNEPAHALAPGSSRVELFKRQNSTVPF 52



>EAY11055.1 on XP_803882   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 203

 Score = 23.5 bits (49), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 9/30 (30%), Positives = 14/30 (46%)

Query: 108 TLCPNNLPGVPHKAQKRIKIIKRHNQTIKY 137
            LCPN           R+++ KR N T+ +
Sbjct: 23  ALCPNEPAHALAPGSSRVELFKRQNSTVPF 52



>EAY11055.1 on Q27895  NTPase2  (Establishment)  [Toxoplasma gondii]
          Length = 255

 Score = 23.5 bits (49), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 112 NNLPGVPHKAQKRIKIIKRHNQTIK 136
           ++L GV    +KRI + K H QT++
Sbjct: 29  SSLRGVDADTEKRINVGKTHLQTLR 53



>EAY11055.1 on AAB60238  Tams1  (Invasion)  [Theileria annulata]
          Length = 281

 Score = 22.7 bits (47), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 9/21 (42%), Positives = 13/21 (61%)

Query: 31 ANSEFFDSDSSQHTPYFAFNL 51
           +   F+ D+S+HTP  AF L
Sbjct: 74 GDKTLFNVDTSKHTPVQAFKL 94




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11058.1 oxidoreductase, aldo/keto reductase family
protein [Trichomonas vaginalis G3]
         (208 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11067.1 Dpy-30 motif family protein [Trichomonas
vaginalis G3]
         (143 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]                 36   6e-04
XP_001350082  Rh2b  (Adhesin)  [Plasmodium falciparum]                 33   0.005
XP_001348153  MAEBL  (Adhesin)  [Plasmodium falciparum]                31   0.017
XP_001350413  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   0.13 
XP_001351564  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   0.23 
XP_001349517  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   0.24 
XP_001351437  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   0.30 
XP_001350415  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   0.36 
XP_001349512  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   0.47 
XP_965999  PfEMP1  (Establishment)  [Plasmodium falciparum]            27   0.68 
XP_001348176  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   0.73 
XP_001349515  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   0.74 
XP_001347691  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   0.85 
XP_001349735  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   0.89 
XP_001349513  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   0.90 
XP_001349438  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   0.91 
XP_001347692  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   1.1  
XP_001349737  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   1.1  
XP_966307  PfEMP1  (Establishment)  [Plasmodium falciparum]            26   1.2  
XP_807842   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   1.3  
XP_809739   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   1.3  
XP_001349030  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   1.3  
XP_001352240  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   1.4  
XP_001609101  variant erythrocyte surface antigen-1, alpha subun...    25   1.5  
XP_001609163  variant erythrocyte surface antigen-1, alpha subun...    25   1.5  
XP_001347690  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   1.5  
XP_001350409  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   1.7  
XP_001608668  variant erythrocyte surface antigen-1, alpha subun...    25   1.7  
XP_001351318  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   1.7  
XP_001610567  variant erythrocyte surface antigen-1, alpha subun...    25   1.7  
XP_001349514  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   2.1  
XP_001351079  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   2.1  
XP_001351517  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   2.1  
XP_001349738  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   2.2  
XP_001349035  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   2.3  
XP_001350797  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   2.4  
XP_001349740  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   2.7  
XP_001351513  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   2.7  
XP_001349437  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   3.0  
XP_001351561  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   3.1  
XP_001348946  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   3.1  
XP_001351563  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   3.9  
XP_001350410  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   4.1  
XP_001350798  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   4.1  
XP_001349033  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   4.1  
XP_001350936  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   4.7  
XP_001349036  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   5.0  
XP_966160  PfEMP1  (Establishment)  [Plasmodium falciparum]            24   5.4  
XP_001350796  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   5.8  
XP_001611206  variant erythrocyte surface antigen-1, alpha subun...    23   6.9  
XP_815905   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   6.9  
XP_001608665  variant erythrocyte surface antigen-1, alpha subun...    23   7.4  
XP_001347288  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   7.5  
XP_001351515  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   7.9  
XP_001351514  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   7.9  
XP_001352242  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   9.0  
XP_001351435  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   9.5  
XP_001351438  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   10.0 

>EAY11067.1 on XP_001350083  Rh2a  (Adhesin)  [Plasmodium falciparum]
          Length = 3130

 Score = 35.8 bits (81), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/67 (35%), Positives = 43/67 (64%), Gaps = 3/67 (4%)

Query: 53   REEQKKLSQEKADFMAQREAEMKRLEEERKAREAEEARLAEEKKRLAEEEAARKKSGEEE 112
            R+EQ++L +EK + + Q+E E+KR E+ER   + EEA   +E++RL +EE  +++  E  
Sbjct: 2755 RQEQERLEREKQEQL-QKEEELKRQEQER--LQKEEALKRQEQERLQKEEELKRQEQERL 2811

Query: 113  EEGTESK 119
            E   + +
Sbjct: 2812 EREKQEQ 2818




 Score = 35.8 bits (81), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/61 (39%), Positives = 41/61 (67%), Gaps = 3/61 (4%)

Query: 53   REEQKKLSQEKADFMAQREAEMKRLEEERKAREAEEARLAEEKKRLAEEEAARKKSGEEE 112
            R+EQ++L +EK + + Q+E E+KR E+ER   + EEA   +E++RL +EE  +++  E  
Sbjct: 2805 RQEQERLEREKQEQL-QKEEELKRQEQER--LQKEEALKRQEQERLQKEEELKRQEQERL 2861

Query: 113  E 113
            E
Sbjct: 2862 E 2862




 Score = 34.3 bits (77), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 5/67 (7%)

Query: 53   REEQKKLSQEKA-----DFMAQREAEMKRLEEERKAREAEEARLAEEKKRLAEEEAARKK 107
            R+EQ++L +E+A         Q+E E+KR E+ER  RE +E    EE+ +  E+E  +K+
Sbjct: 2777 RQEQERLQKEEALKRQEQERLQKEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKE 2836

Query: 108  SGEEEEE 114
               + +E
Sbjct: 2837 EALKRQE 2843




 Score = 31.2 bits (69), Expect = 0.016,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 9/62 (14%)

Query: 53   REEQKKLSQEKADFMAQREAEMKRLEEERKAREAEEARLAEEKKRLAEEEAARKKSGEEE 112
            R+EQ++L         Q+E E+KR E+ER  RE +E    EE+ +  E+E  +K+   + 
Sbjct: 2741 RQEQERL---------QKEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKR 2791

Query: 113  EE 114
            +E
Sbjct: 2792 QE 2793




 Score = 30.0 bits (66), Expect = 0.039,   Method: Composition-based stats.
 Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 10/75 (13%)

Query: 53   REEQKKLSQEKADFMAQREAEMKRLEEERKAREAEEARLAEEKKRLAEEEAARKKSGEEE 112
            R+EQ++L +E+A     +  E +RL++E + +  E+ RL  +K  LAE E   K   E +
Sbjct: 2827 RQEQERLQKEEA----LKRQEQERLQKEEELKRQEQERLERKKIELAEREQHIKSKLESD 2882

Query: 113  ------EEGTESKDD 121
                  +E T+ KD+
Sbjct: 2883 MVKIIKDELTKEKDE 2897




 Score = 26.2 bits (56), Expect = 0.80,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 28/51 (54%)

Query: 68   AQREAEMKRLEEERKAREAEEARLAEEKKRLAEEEAARKKSGEEEEEGTES 118
            A +  E +RL++E + +  E+ RL  EK+   ++E   K+  +E  +  E+
Sbjct: 2738 ALKRQEQERLQKEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEA 2788



>EAY11067.1 on XP_001350082  Rh2b  (Adhesin)  [Plasmodium falciparum]
          Length = 1115

 Score = 33.1 bits (74), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 9/62 (14%)

Query: 53  REEQKKLSQEKADFMAQREAEMKRLEEERKAREAEEARLAEEKKRLAEEEAARKKSGEEE 112
           R+EQ++L         Q+E E+KR E+ER  RE +E    EE+ R  E+E  ++++ +E 
Sbjct: 601 RQEQERL---------QKEEELKRQEQERLEREKQEQLQKEEELRKKEQEKQQQRNIQEL 651

Query: 113 EE 114
           EE
Sbjct: 652 EE 653




 Score = 28.1 bits (61), Expect = 0.17,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 31/48 (64%), Gaps = 1/48 (2%)

Query: 68  AQREAEMKRLEEERKAREAEEARLAEEKK-RLAEEEAARKKSGEEEEE 114
           A +  E +RL++E + +  E+ RL  EK+ +L +EE  RKK  E++++
Sbjct: 598 ALKRQEQERLQKEEELKRQEQERLEREKQEQLQKEEELRKKEQEKQQQ 645




 Score = 24.3 bits (51), Expect = 4.0,   Method: Composition-based stats.
 Identities = 22/68 (32%), Positives = 42/68 (61%), Gaps = 4/68 (5%)

Query: 53  REEQKKLSQEKADFMAQREAEMKRLEEERKAREAEEARLAEEKKRLAEEEAARKKSGEEE 112
           R+EQ++L +EK + + Q+E E+++ E+E K ++     L E+KK     EA  K  G++ 
Sbjct: 615 RQEQERLEREKQEQL-QKEEELRKKEQE-KQQQRNIQELEEQKKPEIINEALVK--GDKI 670

Query: 113 EEGTESKD 120
            EG++ ++
Sbjct: 671 LEGSDQRN 678



>EAY11067.1 on XP_001348153  MAEBL  (Adhesin)  [Plasmodium falciparum]
          Length = 2054

 Score = 31.2 bits (69), Expect = 0.017,   Method: Composition-based stats.
 Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 4/66 (6%)

Query: 55   EQKKLSQEKADFMAQREAEMKRLEEERKAREAEEARLAEEKKRLAEEEAARKKSGEEEEE 114
            E +  S+E   F   R+ E  R+EEE K +EA   + AE+ +R+  EEA R +     EE
Sbjct: 1073 EDETYSEEFGLFEEARKTETGRIEEESKKKEA--MKRAEDARRI--EEARRAEDARRIEE 1128

Query: 115  GTESKD 120
               ++D
Sbjct: 1129 ARRAED 1134




 Score = 28.9 bits (63), Expect = 0.13,   Method: Composition-based stats.
 Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 5/67 (7%)

Query: 54   EEQKKLSQEKADFMAQREAEMKRLEEERKAREAEEARLAEEKKRLAEEEAARKKSGEEEE 113
            EE +K    + +  ++++  MKR E+   AR  EEAR AE+ +R+  EEA R +     E
Sbjct: 1085 EEARKTETGRIEEESKKKEAMKRAED---ARRIEEARRAEDARRI--EEARRAEDARRVE 1139

Query: 114  EGTESKD 120
                 +D
Sbjct: 1140 IARRVED 1146




 Score = 27.7 bits (60), Expect = 0.25,   Method: Composition-based stats.
 Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 7/78 (8%)

Query: 53   REEQKKLSQEKADFMAQREAE-MKRLEEERKAREA---EEARLAEEKKRLAEEEAARKKS 108
            + E  ++ +E     A + AE  +R+EE R+A +A   EEAR AE+ +R+   E AR+  
Sbjct: 1089 KTETGRIEEESKKKEAMKRAEDARRIEEARRAEDARRIEEARRAEDARRV---EIARRVE 1145

Query: 109  GEEEEEGTESKDDTTTTE 126
                 E +   +D    E
Sbjct: 1146 DARRIEISRRAEDAKRIE 1163




 Score = 27.3 bits (59), Expect = 0.33,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 4/67 (5%)

Query: 67   MAQREAEMKRLEEERKAREAEEA-RLAEEKKRLAEEEAARKKSGEEEEEGTESKDDTTTT 125
            +++R  + KR+E  R+A E   A R AE+ +R+   EAAR+   E   E     +D    
Sbjct: 1152 ISRRAEDAKRIEAARRAIEVRRALRKAEDARRI---EAARRYENERRIEEARRYEDEKRI 1208

Query: 126  ETTGETE 132
            E     E
Sbjct: 1209 EAVKRAE 1215




 Score = 25.4 bits (54), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 28/56 (50%)

Query: 63   KADFMAQREAEMKRLEEERKAREAEEARLAEEKKRLAEEEAARKKSGEEEEEGTES 118
            +A+   + EA  + +E  R  R+AE+AR  E  +R   E    +    E+E+  E+
Sbjct: 1155 RAEDAKRIEAARRAIEVRRALRKAEDARRIEAARRYENERRIEEARRYEDEKRIEA 1210




 Score = 24.3 bits (51), Expect = 4.3,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 4/57 (7%)

Query: 45   VEDQWKEFREEQKKLSQEKADFMAQREAEMKRLEEERKAREA---EEARLAEEKKRL 98
            +E++ K+ +E  K+    +    A+R  + +R+EE R+A +A   E AR  E+ +R+
Sbjct: 1095 IEEESKK-KEAMKRAEDARRIEEARRAEDARRIEEARRAEDARRVEIARRVEDARRI 1150




 Score = 23.9 bits (50), Expect = 5.2,   Method: Composition-based stats.
 Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 6/56 (10%)

Query: 54   EEQKKLSQEKADFMAQREAEMKRLEEERK---AREAEEARLAEEKKRLAEEEAARK 106
            EE ++    +    A+R  + +R+E  R+   AR  E +R AE+ KR+   EAAR+
Sbjct: 1115 EEARRAEDARRIEEARRAEDARRVEIARRVEDARRIEISRRAEDAKRI---EAARR 1167



>EAY11067.1 on XP_001350413  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2860

 Score = 28.5 bits (62), Expect = 0.13,   Method: Composition-based stats.
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 4/38 (10%)

Query: 29   ADPI----DFLAHWLLHHRDVEDQWKEFREEQKKLSQE 62
            +DPI    D L  WL  HRD+ ++WK   E   KL +E
Sbjct: 2715 SDPIMNQLDLLHKWLDRHRDMCEKWKNNHERLAKLKEE 2752



>EAY11067.1 on XP_001351564  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2207

 Score = 28.1 bits (61), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 9/52 (17%)

Query: 20   LKETALEDPA-----DPI----DFLAHWLLHHRDVEDQWKEFREEQKKLSQE 62
            +K+T++   A     DPI    +    WL  HRD+ +QW+   E   KL +E
Sbjct: 2048 VKQTSIHSVAKNTNSDPIHNQLELFHKWLDRHRDMCEQWENHHERLAKLKEE 2099



>EAY11067.1 on XP_001349517  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 440

 Score = 27.7 bits (60), Expect = 0.24,   Method: Composition-based stats.
 Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 4/29 (13%)

Query: 26  EDPADPID---FLAH-WLLHHRDVEDQWK 50
           + P+DPI    +L H W+  HRD+ +QWK
Sbjct: 298 QTPSDPIINQLYLYHKWIDKHRDICEQWK 326



>EAY11067.1 on XP_001351437  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2277

 Score = 27.7 bits (60), Expect = 0.30,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)

Query: 20   LKETALEDP-ADPIDFLAHWLLHHRDVEDQWKEFREEQKKLSQ 61
            + +T+ +DP  + I+    WL  HRD+ ++WK   E   KL +
Sbjct: 2105 VTQTSSDDPITNQINLFHKWLDRHRDMCEKWKNNHERLPKLKE 2147



>EAY11067.1 on XP_001350415  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3056

 Score = 27.3 bits (59), Expect = 0.36,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 4/40 (10%)

Query: 26   EDPADPI----DFLAHWLLHHRDVEDQWKEFREEQKKLSQ 61
            + P+DPI    D    W+  HRD+ +QWK   +   KL++
Sbjct: 2914 QTPSDPIINQLDLYHKWIDKHRDICEQWKTKEDMLYKLNE 2953



>EAY11067.1 on XP_001349512  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2980

 Score = 26.9 bits (58), Expect = 0.47,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 9/52 (17%)

Query: 20   LKETALEDPADPI---------DFLAHWLLHHRDVEDQWKEFREEQKKLSQE 62
            +K+T++   A PI         +    WL  HRD+ ++W+   E   KL +E
Sbjct: 2799 VKQTSIHSVAKPISDDPIHNQLELFHKWLDRHRDMCEKWENHHERLAKLKEE 2850



>EAY11067.1 on XP_965999  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 1325

 Score = 26.6 bits (57), Expect = 0.68,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 30   DPIDFLAHWLLHHRDVEDQWKEFREEQKKLSQE 62
            + I+    WL  HRD+ ++W+   E   KL ++
Sbjct: 1177 NKINLFHKWLYRHRDMCEKWENHHERLAKLKEK 1209



>EAY11067.1 on XP_001348176  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3119

 Score = 26.6 bits (57), Expect = 0.73,   Method: Composition-based stats.
 Identities = 12/31 (38%), Positives = 18/31 (58%)

Query: 32   IDFLAHWLLHHRDVEDQWKEFREEQKKLSQE 62
            +D L  WL  HRD+ ++W    E   KL++E
Sbjct: 2984 LDLLHKWLDRHRDMCEKWNTKEELLDKLNEE 3014



>EAY11067.1 on XP_001349515  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 1711

 Score = 26.6 bits (57), Expect = 0.74,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query: 21   KETALEDPADPIDFLAHWLLHHRDVEDQWKEFREEQKKLSQE 62
            KE   +   + +D L  WL  HRD+ ++W    E   KL +E
Sbjct: 1532 KELCGDPIMNQLDLLHKWLDRHRDMCEKWNNKEEVLDKLKEE 1573



>EAY11067.1 on XP_001347691  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2182

 Score = 26.2 bits (56), Expect = 0.85,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 9/52 (17%)

Query: 20   LKETALEDPADPI---------DFLAHWLLHHRDVEDQWKEFREEQKKLSQE 62
            +K+T++   A PI         +    WL  HRD+ ++W+   E   KL +E
Sbjct: 2013 VKQTSIHSVAKPISDDPIHNQLELFHTWLDRHRDMCEKWENHHERLAKLKEE 2064



>EAY11067.1 on XP_001349735  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 431

 Score = 26.2 bits (56), Expect = 0.89,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 30  DPIDFLAHWLLHHRDVEDQWKEFREEQKKLSQE 62
           + I+    WL  HRD+ ++W+   E   KL ++
Sbjct: 283 NKINLFHKWLDRHRDMCEKWENHHERLAKLKEK 315



>EAY11067.1 on XP_001349513  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2858

 Score = 26.2 bits (56), Expect = 0.90,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 4/38 (10%)

Query: 29   ADPI----DFLAHWLLHHRDVEDQWKEFREEQKKLSQE 62
            +DPI    D L  WL  HRD+ ++WK   +   KL+++
Sbjct: 2716 SDPIMNQLDLLHKWLDRHRDMCEKWKSKEDILHKLNEQ 2753



>EAY11067.1 on XP_001349438  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2265

 Score = 26.2 bits (56), Expect = 0.91,   Method: Composition-based stats.
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 4/38 (10%)

Query: 29   ADPID----FLAHWLLHHRDVEDQWKEFREEQKKLSQE 62
            +DPID        WL  HRD+ +QW    E   KL +E
Sbjct: 2059 SDPIDNQLNLFHTWLDRHRDMCEQWNNKEELLDKLKEE 2096



>EAY11067.1 on XP_001347692  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2994

 Score = 25.8 bits (55), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 4/38 (10%)

Query: 29   ADPI----DFLAHWLLHHRDVEDQWKEFREEQKKLSQE 62
            +DPI    D L  WL  HRD+ ++W +  E   KL+++
Sbjct: 2833 SDPIMNQLDLLHTWLDRHRDMCEKWNKKEELLDKLNEQ 2870



>EAY11067.1 on XP_001349737  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2199

 Score = 25.8 bits (55), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 21/42 (50%)

Query: 21   KETALEDPADPIDFLAHWLLHHRDVEDQWKEFREEQKKLSQE 62
            K T  +   + I+    WL  HRD+ ++W+   E   KL +E
Sbjct: 2047 KNTNSDPILNQINLFHTWLDRHRDMCEKWENHHERLAKLKEE 2088



>EAY11067.1 on XP_966307  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2238

 Score = 25.8 bits (55), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 24   ALEDPA-DPIDFLAHWLLHHRDVEDQWKEFREEQKKLSQE 62
            A +DP  + ++    WL  HRD+ ++W+   E   KL +E
Sbjct: 2061 ARDDPIHNQLELFHKWLDRHRDMCEKWENHHERLAKLKEE 2100



>EAY11067.1 on XP_807842   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1043

 Score = 25.8 bits (55), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 2/91 (2%)

Query: 51  EFREEQKKLSQEKADFMAQREA-EMKRLEEERKAREAEEARLAEEKKRLAEEEAARKKSG 109
           E RE     S E AD     E+ +  + EEE  A +      +     L+ E AA   +G
Sbjct: 823 EPREIPSTKSAEVADVEGSSESYDTPQPEEEGGANDGSGGLTSPVAASLSMETAAASVNG 882

Query: 110 EEE-EEGTESKDDTTTTETTGETETGYSESL 139
           E + ++  E   +     +TG   TG  ESL
Sbjct: 883 EHQVQQSIEPSAENNDVRSTGTGNTGAEESL 913



>EAY11067.1 on XP_809739   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1043

 Score = 25.8 bits (55), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 2/91 (2%)

Query: 51  EFREEQKKLSQEKADFMAQREA-EMKRLEEERKAREAEEARLAEEKKRLAEEEAARKKSG 109
           E RE     S E AD     E+ +  + EEE  A +      +     L+ E AA   +G
Sbjct: 823 EPREIPSTKSAEVADVEGSSESYDTPQPEEEGGANDGSGGLTSPVAASLSMETAAASVNG 882

Query: 110 EEE-EEGTESKDDTTTTETTGETETGYSESL 139
           E + ++  E   +     +TG   TG  ESL
Sbjct: 883 EHQVQQSIEPSAENNDVRSTGTGNTGAEESL 913



>EAY11067.1 on XP_001349030  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2215

 Score = 25.8 bits (55), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 4/38 (10%)

Query: 29   ADPID----FLAHWLLHHRDVEDQWKEFREEQKKLSQE 62
            +DPID        WL  HRD+ +QW    +   KL +E
Sbjct: 2020 SDPIDNQLNLFHKWLDRHRDMCEQWNNKEKVLDKLKEE 2057



>EAY11067.1 on XP_001352240  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 1315

 Score = 25.4 bits (54), Expect = 1.4,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 30   DPIDFLAHWLLHHRDVEDQWKEFREEQKKLSQE 62
            + I+    WL  HRD+ ++W+   E   KL ++
Sbjct: 1167 NKINLFHKWLDRHRDMCEKWENHHERLAKLKEK 1199



>EAY11067.1 on XP_001609101  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1359

 Score = 25.4 bits (54), Expect = 1.5,   Method: Composition-based stats.
 Identities = 14/33 (42%), Positives = 20/33 (60%)

Query: 73  EMKRLEEERKAREAEEARLAEEKKRLAEEEAAR 105
           ++K LEE +K  EA + +L E KK     EAA+
Sbjct: 736 KVKALEEIKKTLEAAKEKLEEAKKTQEALEAAK 768




 Score = 23.5 bits (49), Expect = 6.1,   Method: Composition-based stats.
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 4/49 (8%)

Query: 45  VEDQWKEFREEQKKLSQEKADFMAQREAEMKRLEEERKAREAEEARLAE 93
           VE   +  +E+ K L + K    A +E    +LEE +K +EA EA   E
Sbjct: 726 VEKLVEGVKEKVKALEEIKKTLEAAKE----KLEEAKKTQEALEAAKGE 770



>EAY11067.1 on XP_001609163  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1360

 Score = 25.4 bits (54), Expect = 1.5,   Method: Composition-based stats.
 Identities = 14/33 (42%), Positives = 20/33 (60%)

Query: 73  EMKRLEEERKAREAEEARLAEEKKRLAEEEAAR 105
           ++K LEE +K  EA + +L E KK     EAA+
Sbjct: 736 KVKALEEIKKTLEAAKEKLEEAKKTQEALEAAK 768




 Score = 23.1 bits (48), Expect = 7.8,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)

Query: 53  REEQKKLSQEKADFMAQREAEMKRLEEERKAREAEEARLAE 93
           +E+ K L + K    A +E    +LEE +K +EA EA   E
Sbjct: 734 KEKVKALEEIKKTLEAAKE----KLEEAKKTQEALEAAKGE 770



>EAY11067.1 on XP_001347690  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2215

 Score = 25.4 bits (54), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 4/38 (10%)

Query: 29   ADPI----DFLAHWLLHHRDVEDQWKEFREEQKKLSQE 62
            +DPI    +    WL  HRD+ ++W+   E   KL +E
Sbjct: 2070 SDPIHNQLELFHKWLDRHRDMCEKWENHHERLAKLKEE 2107



>EAY11067.1 on XP_001350409  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2223

 Score = 25.4 bits (54), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 17   VQGLKETALEDPA-DPIDFLAHWLLHHRDVEDQWKEFREEQKKLSQE 62
            +  + + A +DP  + ++    WL  HRD+ ++W    E   KL +E
Sbjct: 2045 IHSVAKPARDDPLHNQLELFHKWLDRHRDMCEKWNNKEELLDKLKEE 2091



>EAY11067.1 on XP_001608668  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1337

 Score = 25.4 bits (54), Expect = 1.7,   Method: Composition-based stats.
 Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 14/96 (14%)

Query: 12  LGDVLVQ-GLKETALEDPADPIDFLAHWLLHHRDVEDQWKEFREEQKKLSQEKADFMAQR 70
           +G V+VQ G  + ALE  A+            + +E   ++  E +K+L + K    ++ 
Sbjct: 694 IGSVVVQLGNAQEALEGKAES-----------KVIEGVKQKLGEAKKELEKAKEAVESEV 742

Query: 71  EAEMKRLEEERKAREAEEARLAEEKKRLAEEEAARK 106
             + K LEE +KA   E+A+   +  R+A+ E   K
Sbjct: 743 GMDGKELEEAKKA--VEKAKTEGDNVRMAKLEKKMK 776



>EAY11067.1 on XP_001351318  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2169

 Score = 25.4 bits (54), Expect = 1.7,   Method: Composition-based stats.
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)

Query: 27   DPAD-PIDFLAHWLLHHRDVEDQWKEFREEQKKLSQE 62
            DP D  +D    WL  HRD+ ++W    E   KL +E
Sbjct: 2025 DPIDNQLDLFHTWLDRHRDMCEKWNNKEEVLNKLKEE 2061



>EAY11067.1 on XP_001610567  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1315

 Score = 25.4 bits (54), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 3/45 (6%)

Query: 68  AQREAEMKRLE--EERKAREAEEARLAEEKKRLAEEEAARKKSGE 110
           AQ   E K+ E  E  KA+  +EA+   +K R A EEAA+K +G+
Sbjct: 692 AQEALEGKKKEAIEGVKAK-LQEAKEGLDKARTALEEAAKKVNGD 735



>EAY11067.1 on XP_001349514  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2120

 Score = 25.0 bits (53), Expect = 2.1,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 4/38 (10%)

Query: 29   ADPI----DFLAHWLLHHRDVEDQWKEFREEQKKLSQE 62
            +DPI    +    WL  HRD+ ++W+   E   KL +E
Sbjct: 1972 SDPIHNQLELFHTWLDRHRDMCEKWENHHERLAKLKEE 2009




 Score = 23.9 bits (50), Expect = 5.5,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 93  EEKKRLAEEEAARKKSGEEEEEGTESKDDTTTTET 127
           E  +   EEE  ++ SGE++ +GTE+  +T    T
Sbjct: 776 ENPEDQGEEEGTKQGSGEKKVDGTEAVQETVAEVT 810



>EAY11067.1 on XP_001351079  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2203

 Score = 25.0 bits (53), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 9/52 (17%)

Query: 20   LKETALEDPADPI---------DFLAHWLLHHRDVEDQWKEFREEQKKLSQE 62
            +K+T++   A PI         +    WL  HRD+ ++W    E   KL +E
Sbjct: 2044 VKQTSIHSVAKPISDDPLHNQLELFHKWLDRHRDMCEKWNNKEELLDKLKEE 2095



>EAY11067.1 on XP_001351517  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2193

 Score = 25.0 bits (53), Expect = 2.1,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 21/42 (50%)

Query: 21   KETALEDPADPIDFLAHWLLHHRDVEDQWKEFREEQKKLSQE 62
            K T  +   + I+    WL  HRD+ ++W+   E   KL +E
Sbjct: 2042 KNTNSDPILNQINLFHTWLDRHRDMCEKWENDNERLAKLKEE 2083



>EAY11067.1 on XP_001349738  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2162

 Score = 25.0 bits (53), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)

Query: 24   ALEDPA-DPIDFLAHWLLHHRDVEDQWKEFREEQKKLSQE 62
            A +DP  + ++    WL  HRD+ +QW    E   KL +E
Sbjct: 1990 ARDDPLHNQLNLFHTWLDRHRDMCEQWNNKEEVLDKLKEE 2029



>EAY11067.1 on XP_001349035  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2239

 Score = 25.0 bits (53), Expect = 2.3,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 21   KETALEDPADPIDFLAHWLLHHRDVEDQWKEFREEQKKLSQ 61
            K T  +   + I+    WL  HRD+ ++WK   E   KL +
Sbjct: 2038 KNTNSDPILNQINLFHKWLDRHRDMCEKWKNNHERLPKLKE 2078



>EAY11067.1 on XP_001350797  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2287

 Score = 25.0 bits (53), Expect = 2.4,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 4/38 (10%)

Query: 29   ADPI----DFLAHWLLHHRDVEDQWKEFREEQKKLSQE 62
            +DPI    +    WL  HRD+ ++W+   E   KL +E
Sbjct: 2092 SDPIHNQLELFHTWLDRHRDMCEKWENHHERLAKLKEE 2129



>EAY11067.1 on XP_001349740  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3346

 Score = 24.6 bits (52), Expect = 2.7,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 4/38 (10%)

Query: 29   ADPI----DFLAHWLLHHRDVEDQWKEFREEQKKLSQE 62
            +DPI    D L  WL  HRD+ + W    E   KL ++
Sbjct: 3204 SDPIMNQLDLLHKWLDRHRDMCEMWNNKEEVLDKLKEQ 3241



>EAY11067.1 on XP_001351513  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2152

 Score = 24.6 bits (52), Expect = 2.7,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 21   KETALEDPADPIDFLAHWLLHHRDVEDQWKEFREEQ--KKLSQE 62
            K+T  +   + +D    WL  HR++ +QW + ++E+   KL +E
Sbjct: 1983 KQTHTDPILNQLDLFHKWLDRHRNMCEQWNKNKKEELLDKLKEE 2026



>EAY11067.1 on XP_001349437  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2231

 Score = 24.6 bits (52), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 9/52 (17%)

Query: 20   LKETALEDPA-----DPI----DFLAHWLLHHRDVEDQWKEFREEQKKLSQE 62
            +K+T++   A     DPI    D L  WL  HR + ++W    E   KL +E
Sbjct: 2039 VKQTSIHSVAKLTNSDPIHKQLDLLHTWLDRHRHMCEKWNNKEELLDKLKKE 2090



>EAY11067.1 on XP_001351561  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3553

 Score = 24.6 bits (52), Expect = 3.1,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 22/42 (52%)

Query: 21   KETALEDPADPIDFLAHWLLHHRDVEDQWKEFREEQKKLSQE 62
            K T  +   + +D L  WL  HRD+ + W +  +   KL+++
Sbjct: 3408 KNTNSDPIMNQLDLLHKWLDRHRDICENWGKKEDILNKLNEQ 3449



>EAY11067.1 on XP_001348946  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3553

 Score = 24.6 bits (52), Expect = 3.1,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 22/42 (52%)

Query: 21   KETALEDPADPIDFLAHWLLHHRDVEDQWKEFREEQKKLSQE 62
            K T  +   + +D L  WL  HRD+ + W +  +   KL+++
Sbjct: 3408 KNTNSDPIMNQLDLLHKWLDRHRDICENWGKKEDILNKLNEQ 3449



>EAY11067.1 on XP_001351563  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2149

 Score = 24.3 bits (51), Expect = 3.9,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 9/52 (17%)

Query: 20   LKETALEDPADPI---------DFLAHWLLHHRDVEDQWKEFREEQKKLSQE 62
            +K+T++   A PI         +    WL  HRD+ ++W+   E   KL ++
Sbjct: 1966 VKQTSIHSVAKPISDDPLLNQLELFHKWLDRHRDMCEKWENHHERLAKLKEK 2017



>EAY11067.1 on XP_001350410  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2178

 Score = 24.3 bits (51), Expect = 4.1,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 24   ALEDPA-DPIDFLAHWLLHHRDVEDQWKEFREEQKKLSQE 62
            A +DP  + ++    WL  HR++ ++WK   E   KL +E
Sbjct: 1968 ARDDPLHNQLNLFHTWLDRHRNMCEKWKNDNERLAKLKEE 2007



>EAY11067.1 on XP_001350798  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2359

 Score = 24.3 bits (51), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 9/25 (36%), Positives = 14/25 (56%), Gaps = 4/25 (16%)

Query: 29   ADPI----DFLAHWLLHHRDVEDQW 49
            +DP+    D    WL  HRD+ ++W
Sbjct: 2202 SDPVMNQLDLFHKWLDRHRDMCEKW 2226



>EAY11067.1 on XP_001349033  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2064

 Score = 24.3 bits (51), Expect = 4.1,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 4/38 (10%)

Query: 29   ADPI----DFLAHWLLHHRDVEDQWKEFREEQKKLSQE 62
            +DPI    +    WL  HR++ ++W+   E   KL +E
Sbjct: 1919 SDPIHNQLELFHKWLDRHRNMCEKWENHHERLAKLKEE 1956



>EAY11067.1 on XP_001350936  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2163

 Score = 23.9 bits (50), Expect = 4.7,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 4/38 (10%)

Query: 29   ADPI----DFLAHWLLHHRDVEDQWKEFREEQKKLSQE 62
            +DPI    +    WL  HR++ ++WK   E   KL +E
Sbjct: 2018 SDPIHNQLELFHKWLDRHRNMCEKWKNDNERLAKLKEE 2055



>EAY11067.1 on XP_001349036  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2192

 Score = 23.9 bits (50), Expect = 5.0,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 4/38 (10%)

Query: 29   ADPI----DFLAHWLLHHRDVEDQWKEFREEQKKLSQE 62
            +DPI    +    WL  HRD+ +QW    E   KL +E
Sbjct: 2047 SDPIHNQLELFHTWLDRHRDMCEQWSNKEELLDKLKEE 2084



>EAY11067.1 on XP_966160  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2394

 Score = 23.9 bits (50), Expect = 5.4,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 26/44 (59%), Gaps = 2/44 (4%)

Query: 21   KETALEDPADPIDFLAHWLLHHRDVEDQWKEFREEQ--KKLSQE 62
            K+T  +   + I+    WL  HR++ +QW + ++E+   KL++E
Sbjct: 2312 KQTHNDPIVNQINLFHKWLDRHRNMCEQWDKNKKEELLDKLNEE 2355



>EAY11067.1 on XP_001350796  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2646

 Score = 23.9 bits (50), Expect = 5.8,   Method: Composition-based stats.
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)

Query: 27   DPAD-PIDFLAHWLLHHRDVEDQWKEFREEQKKLSQE 62
            DP D  +D    WL  HRD+ ++ K   E   KL +E
Sbjct: 2479 DPIDNQLDLFHTWLDRHRDMCEKLKNDNERLAKLKEE 2515



>EAY11067.1 on XP_001611206  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1285

 Score = 23.5 bits (49), Expect = 6.9,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 116  TESKDDTTTTETTGETETGYSESLGDTY 143
            T +KD    +  TGE  T  S + G+TY
Sbjct: 1042 TLTKDSEYLSPLTGELYTAVSATFGNTY 1069




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11072.1 TLD family protein [Trichomonas vaginalis G3]
         (484 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAT07401  Tc85  (Adhesin)  [Trypanosoma cruzi]                         27   0.72 
AAT07412  Tc85  (Adhesin)  [Trypanosoma cruzi]                         26   1.1  
AAT07416  Tc85  (Adhesin)  [Trypanosoma cruzi]                         26   1.1  
AAT07413  Tc85  (Adhesin)  [Trypanosoma cruzi]                         26   1.1  
AAT07409  Tc85  (Adhesin)  [Trypanosoma cruzi]                         26   1.1  
AAT07408  Tc85  (Adhesin)  [Trypanosoma cruzi]                         26   1.1  
AAT07404  Tc85  (Adhesin)  [Trypanosoma cruzi]                         26   1.1  
AAT07403  Tc85  (Adhesin)  [Trypanosoma cruzi]                         26   1.1  
AAT07400  Tc85  (Adhesin)  [Trypanosoma cruzi]                         26   1.1  
AAT07419  Tc85  (Adhesin)  [Trypanosoma cruzi]                         26   1.4  
AAT07415  Tc85  (Adhesin)  [Trypanosoma cruzi]                         26   1.5  
AAQ11892  TRAP  (Invasion)  [Plasmodium falciparum]                    27   3.0  

>EAY11072.1 on AAT07401  Tc85  (Adhesin)  [Trypanosoma cruzi]
          Length = 70

 Score = 26.6 bits (57), Expect = 0.72,   Method: Composition-based stats.
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 130 KKAPDVAKKANELGVNIAFLTLGLIPA--FFLPFSPLPVALTF 170
           +K   V K+ +E+GV  AFLT  L+ A    + F+   VA+ F
Sbjct: 5   QKTQVVTKEGSEIGVKFAFLTPSLLSAGGVMVAFAESLVAIDF 47



>EAY11072.1 on AAT07412  Tc85  (Adhesin)  [Trypanosoma cruzi]
          Length = 70

 Score = 26.2 bits (56), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 130 KKAPDVAKKANELGVNIAFLTLGLIPA--FFLPFSPLPVALTF 170
           +K   V K+ +E+GV  AFLT  L+ A    + F+   VA+ F
Sbjct: 5   QKTQVVTKEESEIGVKFAFLTPSLLSAGGVMVAFAESLVAIDF 47



>EAY11072.1 on AAT07416  Tc85  (Adhesin)  [Trypanosoma cruzi]
          Length = 70

 Score = 26.2 bits (56), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 130 KKAPDVAKKANELGVNIAFLTLGLIPA--FFLPFSPLPVALTF 170
           +K   V K+ +E+GV  AFLT  L+ A    + F+   VA+ F
Sbjct: 5   QKTQVVTKEESEIGVKFAFLTPSLLSAGGVMVAFAESLVAIDF 47



>EAY11072.1 on AAT07413  Tc85  (Adhesin)  [Trypanosoma cruzi]
          Length = 70

 Score = 26.2 bits (56), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 130 KKAPDVAKKANELGVNIAFLTLGLIPA--FFLPFSPLPVALTF 170
           +K   V K+ +E+GV  AFLT  L+ A    + F+   VA+ F
Sbjct: 5   QKTQVVTKEESEIGVKFAFLTPSLLSAGGVMVAFAESLVAIDF 47



>EAY11072.1 on AAT07409  Tc85  (Adhesin)  [Trypanosoma cruzi]
          Length = 70

 Score = 26.2 bits (56), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 130 KKAPDVAKKANELGVNIAFLTLGLIPA--FFLPFSPLPVALTF 170
           +K   V K+ +E+GV  AFLT  L+ A    + F+   VA+ F
Sbjct: 5   QKTQVVTKEESEIGVKFAFLTPSLLSAGGVMVAFAESLVAIDF 47



>EAY11072.1 on AAT07408  Tc85  (Adhesin)  [Trypanosoma cruzi]
          Length = 70

 Score = 26.2 bits (56), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 130 KKAPDVAKKANELGVNIAFLTLGLIPA--FFLPFSPLPVALTF 170
           +K   V K+ +E+GV  AFLT  L+ A    + F+   VA+ F
Sbjct: 5   QKTQVVTKEESEIGVKFAFLTPSLLSAGGVMVAFAESLVAIDF 47



>EAY11072.1 on AAT07404  Tc85  (Adhesin)  [Trypanosoma cruzi]
          Length = 70

 Score = 26.2 bits (56), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 130 KKAPDVAKKANELGVNIAFLTLGLIPA--FFLPFSPLPVALTF 170
           +K   V K+ +E+GV  AFLT  L+ A    + F+   VA+ F
Sbjct: 5   QKTQVVTKEESEIGVKFAFLTPSLLSAGGVMVAFAESLVAIDF 47



>EAY11072.1 on AAT07403  Tc85  (Adhesin)  [Trypanosoma cruzi]
          Length = 70

 Score = 26.2 bits (56), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 130 KKAPDVAKKANELGVNIAFLTLGLIPA--FFLPFSPLPVALTF 170
           +K   V K+ +E+GV  AFLT  L+ A    + F+   VA+ F
Sbjct: 5   QKTQVVTKEESEIGVKFAFLTPSLLSAGGVMVAFAESLVAIDF 47



>EAY11072.1 on AAT07400  Tc85  (Adhesin)  [Trypanosoma cruzi]
          Length = 70

 Score = 26.2 bits (56), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 130 KKAPDVAKKANELGVNIAFLTLGLIPA--FFLPFSPLPVALTF 170
           +K   V K+ +E+GV  AFLT  L+ A    + F+   VA+ F
Sbjct: 5   QKTQVVTKEESEIGVKFAFLTPSLLSAGGVMVAFAESLVAIDF 47



>EAY11072.1 on AAT07419  Tc85  (Adhesin)  [Trypanosoma cruzi]
          Length = 70

 Score = 25.8 bits (55), Expect = 1.4,   Method: Composition-based stats.
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 130 KKAPDVAKKANELGVNIAFLTLGLIPA--FFLPFSPLPVALTF 170
           +K   V K+ +E+GV  AFLT  L+ A    + F+   VA+ F
Sbjct: 5   QKTQVVTKEESEIGVKFAFLTPSLLSAGGVMVAFAESLVAIDF 47



>EAY11072.1 on AAT07415  Tc85  (Adhesin)  [Trypanosoma cruzi]
          Length = 70

 Score = 25.8 bits (55), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 130 KKAPDVAKKANELGVNIAFLTLGLIPA--FFLPFSPLPVALTF 170
           +K   V K+ +E+GV  AFLT  L+ A    + F+   VA+ F
Sbjct: 5   QKTQVVTKEESEIGVKFAFLTPSLLSAGGVMVAFAESLVAIDF 47



>EAY11072.1 on AAQ11892  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 559

 Score = 26.9 bits (58), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 13/31 (41%), Positives = 15/31 (48%)

Query: 166 VALTFFDSFIVEGRKVLIRFITTIFKHNSVA 196
           V L FFD F+V GR V    +  I  H  V 
Sbjct: 13  VFLIFFDLFLVNGRDVQNNIVDEIKYHEEVC 43




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11078.1 hypothetical protein TVAG_045020 [Trichomonas
vaginalis G3]
         (425 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001611736  variant erythrocyte surface antigen-1, alpha subun...    27   1.8  
AAM47174  Rh4  (Adhesin)  [Plasmodium falciparum]                      26   4.1  
AAM47175  Rh4  (Adhesin)  [Plasmodium falciparum]                      26   4.1  
AAM47192  Rh4  (Adhesin)  [Plasmodium falciparum]                      26   4.1  
XP_001608668  variant erythrocyte surface antigen-1, alpha subun...    26   5.1  
XP_001609034  variant erythrocyte surface antigen-1, alpha subun...    26   5.5  
XP_001349033  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   9.7  

>EAY11078.1 on XP_001611736  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1365

 Score = 27.3 bits (59), Expect = 1.8,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 55/135 (40%), Gaps = 6/135 (4%)

Query: 224 MDEDTRLRQESKEAANRQTTEQNSSVNWMNERQQLREDLQKLNQEISEKKSKVQSLEKTV 283
           M+ D + R    +   R+   Q +S +     + L E + ++  ++   + ++   E  +
Sbjct: 680 MEHDRKSRVNKVKEELRKVVPQGNSGDLPEALKDLLEKIGEVVVQLGNAQERLDRGEIDL 739

Query: 284 TKKVAAFEKFAPLIKKWSNKLNTVEIPSESVAQLNEKISQAKAQNDEARKQSHEKMTNLL 343
           T    A     P +  W+    TV         L+E + +   +  +A  Q+H+  T+  
Sbjct: 740 TGVRKALNNAVP-VDNWTRPFRTV-----LKKVLDELVKKKVKELGKAGGQTHDGQTSQA 793

Query: 344 MENAKLEKEVNRKRI 358
           + NAK   E   K+I
Sbjct: 794 INNAKKALETADKKI 808



>EAY11078.1 on AAM47174  Rh4  (Adhesin)  [Plasmodium falciparum]
          Length = 1711

 Score = 26.2 bits (56), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 5/47 (10%)

Query: 36  NIEISEIQNDITNFTNANRLFESIEVTSISARSLNET----PPEIPV 78
           NI + EI+N +  +T +NR+   ++   I  +SLN T    PP  P 
Sbjct: 121 NILMDEIENYVKKYTESNRIM-YLQFKYIYLQSLNITVSFVPPNSPF 166



>EAY11078.1 on AAM47175  Rh4  (Adhesin)  [Plasmodium falciparum]
          Length = 1711

 Score = 26.2 bits (56), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 5/47 (10%)

Query: 36  NIEISEIQNDITNFTNANRLFESIEVTSISARSLNET----PPEIPV 78
           NI + EI+N +  +T +NR+   ++   I  +SLN T    PP  P 
Sbjct: 121 NILMDEIENYVKKYTESNRIM-YLQFKYIYLQSLNITVSFVPPNSPF 166



>EAY11078.1 on AAM47192  Rh4  (Adhesin)  [Plasmodium falciparum]
          Length = 1716

 Score = 26.2 bits (56), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 5/47 (10%)

Query: 36  NIEISEIQNDITNFTNANRLFESIEVTSISARSLNET----PPEIPV 78
           NI + EI+N +  +T +NR+   ++   I  +SLN T    PP  P 
Sbjct: 121 NILMDEIENYVKKYTESNRIM-YLQFKYIYLQSLNITVSFVPPNSPF 166



>EAY11078.1 on XP_001608668  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1337

 Score = 26.2 bits (56), Expect = 5.1,   Method: Composition-based stats.
 Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 22/80 (27%)

Query: 140 HEQHSNYLQSKMAWLNDQLNERNNEVRIINQTKREAEQALAALKDRFISNTTLSGGRLDL 199
           +E+  +Y  +K     DQ+++  N    INQT     +AL  LK    ++TTL+G R D+
Sbjct: 817 NEKDRDYSSAK-----DQISDAING---INQTL----EALQLLKR---ASTTLNGHRDDI 861

Query: 200 -------EKTIISLQNQYNS 212
                  EKTI  L+  YNS
Sbjct: 862 SDVFMIYEKTITDLKEIYNS 881



>EAY11078.1 on XP_001609034  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1313

 Score = 25.8 bits (55), Expect = 5.5,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 19/62 (30%)

Query: 258 LREDLQKLNQEISEKKSKVQSLEKTVTKKV------------AAFEKFAPLIKKWSNKLN 305
           LRE L K+N+       KV+ LEK VT+K              A E+   ++K   NK N
Sbjct: 717 LREVLDKVNE-------KVKELEKVVTEKADGETSQALSKAKTALERAKEMVKNDGNKKN 769

Query: 306 TV 307
            +
Sbjct: 770 KL 771



>EAY11078.1 on XP_001349033  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2064

 Score = 25.0 bits (53), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 4/49 (8%)

Query: 127 NNTVIQLKADLRTHEQHSNYLQSKMAWLN----DQLNERNNEVRIINQT 171
           N  V+Q   DL   ++  NY+   M W+N    D ++ R    R IN +
Sbjct: 551 NKCVLQPDRDLGIEKKVKNYVDFMMFWINHMLKDSIDWRKYIKRCINNS 599




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11081.1 hypothetical protein TVAG_045050 [Trichomonas
vaginalis G3]
         (143 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001349738  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   4.4  

>EAY11081.1 on XP_001349738  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2162

 Score = 23.9 bits (50), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 11/40 (27%), Positives = 24/40 (60%)

Query: 30   TVRSARDNESKSQLDSKLEEILNKNAELEREFQNSRVIPR 69
            T+ S ++  + +++  K++EIL K  + + + QNS   P+
Sbjct: 1057 TIVSNKEGGTPTKISDKIKEILEKVDKKQPDKQNSGTTPK 1096




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11083.1 hypothetical protein TVAG_045070 [Trichomonas
vaginalis G3]
         (137 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAX07983  alpha-9 giardin  (Others)  [Giardia duodenalis]              25   2.4  
Q4VPP0  Giardin subunit alpha-9  (Others)  [Giardia duodenalis]        25   2.4  
XP_812620   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   3.8  

>EAY11083.1 on AAX07983  alpha-9 giardin  (Others)  [Giardia duodenalis]
          Length = 255

 Score = 24.6 bits (52), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)

Query: 5  NKDKIVTNYPPVY-LYTAPSPKVRIESTNFQNITDYCVICANAATAYLQYCCFANNN 60
          ++DK+V NY  +Y +Y A + K  ++S   + +  Y    A    A L     +  N
Sbjct: 35 HRDKVVINYKSIYGMYPADAIKKALKSGPAETLLMYAWTDAQEVRARLLNQALSGKN 91



>EAY11083.1 on Q4VPP0  Giardin subunit alpha-9  (Others)  [Giardia duodenalis]
          Length = 255

 Score = 24.6 bits (52), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)

Query: 5  NKDKIVTNYPPVY-LYTAPSPKVRIESTNFQNITDYCVICANAATAYLQYCCFANNN 60
          ++DK+V NY  +Y +Y A + K  ++S   + +  Y    A    A L     +  N
Sbjct: 35 HRDKVVINYKSIYGMYPADAIKKALKSGPAETLLMYAWTDAQEVRARLLNQALSGKN 91



>EAY11083.1 on XP_812620   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1042

 Score = 24.3 bits (51), Expect = 3.8,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 2/34 (5%)

Query: 103 NNDKCINFIKKKEVDISDLDEN--PKYNIFLFYL 134
           N+D  I F+ ++E+D    DEN    + I  FY+
Sbjct: 636 NSDCWIAFVDREEIDCKGYDENLFDSHRISHFYI 669




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11090.1 hypothetical protein TVAG_045140 [Trichomonas
vaginalis G3]
         (360 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001347691  PfEMP1  (Establishment)  [Plasmodium falciparum]         32   0.049
AAY44835  MSA-1  (Invasion)  [Babesia bovis]                           27   1.2  
AAY44838  MSA-1  (Invasion)  [Babesia bovis]                           27   1.2  
XP_844695  VSG  (Establishment)  [Trypanosoma brucei]                  25   8.8  

>EAY11090.1 on XP_001347691  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2182

 Score = 32.3 bits (72), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 31/140 (22%), Positives = 55/140 (39%), Gaps = 9/140 (6%)

Query: 159  AILFSEAAQEYAITLDTTSHLNEQGRPLKREPFKFGVDPRQYW-----FYIPILKHAFYS 213
             +L  E+++   +T   TS       PL ++P     DP+           P L+  FY+
Sbjct: 1030 GLLLGESSEALGMTA-ITSGAGAPKTPLTQQPVASSDDPQSKLQKSGDIPPPFLRQMFYT 1088

Query: 214  CAERNQVIDDMSNNDQFESTVYTHLHHGKPNQQWKVENRNIVGKAHEKVITYIEKDPTSF 273
             A+   ++   SN+D  +S+ Y  +  G    + K E    + +A +K     +K P   
Sbjct: 1089 IADYKDILYSGSNDDNTKSSTYNDILKGDKEMKAKEEK---IKEAIQKFFENGDKKPDGG 1145

Query: 274  RMKSRSENVNGIQLFYFCPC 293
               S   N N   ++    C
Sbjct: 1146 TTPSSWWNNNAKHIWNGMIC 1165



>EAY11090.1 on AAY44835  MSA-1  (Invasion)  [Babesia bovis]
          Length = 270

 Score = 27.3 bits (59), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 3/37 (8%)

Query: 149 LDSPPYYVPIA---ILFSEAAQEYAITLDTTSHLNEQ 182
           +D PP YVP+A   IL+ +    Y + +   S LNE+
Sbjct: 28  IDLPPAYVPVASPGILYEDIKTFYNLMIKLESSLNEE 64



>EAY11090.1 on AAY44838  MSA-1  (Invasion)  [Babesia bovis]
          Length = 266

 Score = 27.3 bits (59), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 3/37 (8%)

Query: 149 LDSPPYYVPIA---ILFSEAAQEYAITLDTTSHLNEQ 182
           +D PP YVP+A   IL+ +    Y + +   S LNE+
Sbjct: 28  IDLPPAYVPVASPGILYEDIKTFYNLMIKLESSLNEE 64



>EAY11090.1 on XP_844695  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 476

 Score = 25.0 bits (53), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 13/35 (37%), Positives = 17/35 (48%)

Query: 53  YYPESILLRNLKYPECVLADDKTDEFETDSKIVVK 87
           YY  + L+R  K P    A D +D+ E D K   K
Sbjct: 387 YYSAAKLIREKKQPSKTQAQDGSDQEENDCKTKSK 421




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11093.1 Phosphatidylinositol 3- and 4-kinase family
protein [Trichomonas vaginalis G3]
         (802 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001349740  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   5.7  
XP_001351563  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   9.8  

>EAY11093.1 on XP_001349740  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3346

 Score = 26.9 bits (58), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 5/61 (8%)

Query: 441 EQFSSLLEKMIKN--LTGEVKQQLDDE--IELFKKLYNLLQ-NHPKGSPAAIRDVIKDLL 495
           E  SS L+K +K    T  VK  LD +  ++  K+    +  N PKG P    DVI  LL
Sbjct: 643 EDVSSKLKKFLKQELFTNYVKNALDKDETLDSMKESTECIDPNKPKGKPCNNNDVINILL 702

Query: 496 N 496
           N
Sbjct: 703 N 703



>EAY11093.1 on XP_001351563  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2149

 Score = 26.2 bits (56), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 2/41 (4%)

Query: 463  DDEIELFKK--LYNLLQNHPKGSPAAIRDVIKDLLNNDPVH 501
            DDE    K   + N+LQN P   P  +RD + +  N   +H
Sbjct: 1846 DDEWNTLKHDFISNMLQNEPNTEPNILRDNVDNNTNPKTLH 1886




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11101.1 hypothetical protein TVAG_358800 [Trichomonas
vaginalis G3]
         (53 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_818190   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   2.3  
AAK97081  gGSP  (Others)  [Giardia duodenalis]                         22   2.5  
XP_812701   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   2.7  

>EAY11101.1 on XP_818190   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 807

 Score = 21.9 bits (45), Expect = 2.3,   Method: Composition-based stats.
 Identities = 7/11 (63%), Positives = 10/11 (90%)

Query: 39  TELHLGKPTTL 49
           T +HLG+PTT+
Sbjct: 174 TRVHLGRPTTV 184



>EAY11101.1 on AAK97081  gGSP  (Others)  [Giardia duodenalis]
          Length = 255

 Score = 21.9 bits (45), Expect = 2.5,   Method: Composition-based stats.
 Identities = 10/30 (33%), Positives = 17/30 (56%)

Query: 12 FFHSTTTATFQTLFTAVVISHGQHPMLTEL 41
          F+ + T  TFQ+LFT+   +  +    T+L
Sbjct: 34 FYQALTDLTFQSLFTSAANAAREGDAFTKL 63



>EAY11101.1 on XP_812701   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 804

 Score = 21.9 bits (45), Expect = 2.7,   Method: Composition-based stats.
 Identities = 8/11 (72%), Positives = 10/11 (90%)

Query: 39  TELHLGKPTTL 49
           TE+ LGKPTT+
Sbjct: 172 TEVRLGKPTTV 182




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11108.1 hypothetical protein TVAG_358870 [Trichomonas
vaginalis G3]
         (393 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351439  PfEMP1  (Establishment)  [Plasmodium falciparum]         30   0.39 
XP_001351438  PfEMP1  (Establishment)  [Plasmodium falciparum]         30   0.41 
XP_001349035  PfEMP1  (Establishment)  [Plasmodium falciparum]         29   0.44 
XP_655415  Hgl  (Adhesin)  [Entamoeba histolytica]                     29   0.50 
XP_001351437  PfEMP1  (Establishment)  [Plasmodium falciparum]         29   0.53 
XP_001347296  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   3.1  
XP_827769  VSG  (Establishment)  [Trypanosoma brucei]                  26   3.5  
XP_827084  VSG  (Establishment)  [Trypanosoma brucei]                  26   4.6  

>EAY11108.1 on XP_001351439  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2326

 Score = 29.6 bits (65), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 7/75 (9%)

Query: 195  VVSSNLFGNPEFSSRSLYTPFNNTNISD-------ILQNSKIIYDIAGIISSTLNRISKI 247
            +   NLF   E++     +  N  NISD       +  N+   Y+    + S ++ I+  
Sbjct: 2028 IHDRNLFSGEEYNYDMFNSGNNPINISDSTNSMDSLTSNNHSPYNDKNDLYSGIDLINDA 2087

Query: 248  ISGNLVDDYKKLLKK 262
            +SGN +D Y ++LK+
Sbjct: 2088 LSGNHIDIYDEMLKR 2102



>EAY11108.1 on XP_001351438  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2312

 Score = 29.6 bits (65), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 7/75 (9%)

Query: 195  VVSSNLFGNPEFSSRSLYTPFNNTNISD-------ILQNSKIIYDIAGIISSTLNRISKI 247
            +   NLF   E++     +  N  NISD       +  N+   Y+    + S ++ I+  
Sbjct: 2014 IHDRNLFSGEEYNYDMFNSGNNPINISDSTNSMDSLTSNNHSPYNDKNDLYSGIDLINDA 2073

Query: 248  ISGNLVDDYKKLLKK 262
            +SGN +D Y ++LK+
Sbjct: 2074 LSGNHIDIYDEMLKR 2088



>EAY11108.1 on XP_001349035  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2239

 Score = 29.3 bits (64), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 7/75 (9%)

Query: 195  VVSSNLFGNPEFSSRSLYTPFNNTNISD-------ILQNSKIIYDIAGIISSTLNRISKI 247
            +   NLF   E++     +  N  NISD       +  N+   Y+    + S ++ I+  
Sbjct: 1943 IHDRNLFSGEEYNYDMFNSGNNPINISDSTNSMDSLTSNNHSPYNDKNDLYSGIDLINDA 2002

Query: 248  ISGNLVDDYKKLLKK 262
            +SGN +D Y ++LK+
Sbjct: 2003 LSGNHIDIYDEMLKR 2017



>EAY11108.1 on XP_655415  Hgl  (Adhesin)  [Entamoeba histolytica]
          Length = 1291

 Score = 29.3 bits (64), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 9/70 (12%)

Query: 33  PKDCVNLEKLTQIFRESLLYEEKLENDQN-----PAVISVLSPYSKFFHVMVLDLSSKLY 87
           PKDCVN + + + + + L  ++  ++  N      A ++    YS  F++     S KL+
Sbjct: 840 PKDCVNEQCIPRTYVDCLGNDDNFKSIYNFYLPCQAYVTATYHYSSLFNLT----SYKLH 895

Query: 88  LPAPEWFSPE 97
           LP  E F  E
Sbjct: 896 LPQSEEFMKE 905



>EAY11108.1 on XP_001351437  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2277

 Score = 29.3 bits (64), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 7/75 (9%)

Query: 195  VVSSNLFGNPEFSSRSLYTPFNNTNISD-------ILQNSKIIYDIAGIISSTLNRISKI 247
            +   NLF   E++     +  N  NISD       +  N+   Y+    + S ++ I+  
Sbjct: 2010 IHDRNLFSGEEYNYDMFNSGNNPINISDSTNSMDSLTSNNHSPYNDKNDLYSGIDLINDA 2069

Query: 248  ISGNLVDDYKKLLKK 262
            +SGN +D Y ++LK+
Sbjct: 2070 LSGNHIDIYDEMLKR 2084



>EAY11108.1 on XP_001347296  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 151

 Score = 25.8 bits (55), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 9/26 (34%), Positives = 18/26 (69%)

Query: 188 WNEIKNVVVSSNLFGNPEFSSRSLYT 213
           WN  +N+  ++N+  NP++ S ++YT
Sbjct: 96  WNVPENINRTTNIMNNPKYVSNNIYT 121



>EAY11108.1 on XP_827769  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 533

 Score = 26.2 bits (56), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 12/82 (14%)

Query: 254 DDYKKLLKKTKERPLTDEELEYLRSPVKPKKLEEYLSETQNEYEKEFISAL---YGSIVN 310
           DD+K   +  K+     E+ + ++  V P+     L++T  +     ++A+      ++ 
Sbjct: 105 DDWKAAAEALKQ----GEDNQKVKQAVTPE-----LTKTAKQLAAVQLAAIALEVKQLLK 155

Query: 311 RYENSNPEAAKWRKHFGYSLVM 332
           RY N NPEAAK++     + +M
Sbjct: 156 RYPNVNPEAAKYQSASPTAAIM 177



>EAY11108.1 on XP_827084  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 487

 Score = 25.8 bits (55), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 11/68 (16%)

Query: 139 TGAQSVTT---KFHFSIWSWDDLMPYDGRKISEATKRALG--ENNYGLAFSKMIWNEIKN 193
           TGA+S      K  +++W+   L   D RK++ A +RA    ++N GL      W  +K 
Sbjct: 108 TGARSKLGGPEKDKYAVWTGSALSKEDKRKVANAAERAEDCMKDNDGL------WRILKE 161

Query: 194 VVVSSNLF 201
             +  NL 
Sbjct: 162 TSIEKNLI 169




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11121.1 CK1 family protein kinase [Trichomonas
vaginalis G3]
         (410 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    53   1e-08
XP_818963   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   8.3  
XP_816177   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   9.8  

>EAY11121.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 53.1 bits (126), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 6/153 (3%)

Query: 6   VGSKYRIKKKRGSGSFGDIYAGEHIITLEEVAVKFESVDNIPPQLLCESKIYKTLRGGVG 65
           V   Y I +K G G F +++ G + +T ++  V          ++  E KI + LRGG  
Sbjct: 51  VPDSYEIVRKIGRGKFSEVFEGLNTVT-KDKCVIKILKPVKKKKIKREIKILQNLRGGPN 109

Query: 66  IPDIKWYGVEGDYNVMVIELLSSTLENL-LDECQRSFSLKTVLMIADQMLSRIQYIHNNG 124
           I  IK   +  D       L+   + N        + +++ +     Q+L  + Y H+ G
Sbjct: 110 I--IKLLDIVKDPQSRTPSLIFEHVNNTDFKTLYPTLTIQDIKYYIYQLLKAMNYCHSQG 167

Query: 125 ILHRDIKPENFMLGTDKDQNIIYSIDFGLSKRY 157
           I+HRDIKP N M+  D ++ I+  ID+GL++ Y
Sbjct: 168 IMHRDIKPHNVMI--DHEKKILRLIDWGLAEFY 198



>EAY11121.1 on XP_818963   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1055

 Score = 25.4 bits (54), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 3/66 (4%)

Query: 28   EHIITLEEVAVKFESVDNIPPQLLCESKIYKTLRGGVGIPDIKWYGVEGDYNVM---VIE 84
            ++I   E     FE V  +P  +    +   T  GG GIP  K      D +     + E
Sbjct: 962  DNISWTEGAEFSFEDVKEVPQTVDTAPENTNTTPGGEGIPSTKGAARHSDNDTFTGEIAE 1021

Query: 85   LLSSTL 90
            LLS  L
Sbjct: 1022 LLSMGL 1027



>EAY11121.1 on XP_816177   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 779

 Score = 25.0 bits (53), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 4/47 (8%)

Query: 356 TATPLITIAQQSHPQTGALKTSATMGQMPTRQKISPQTSLLWAMKNG 402
           +A PL+ +        GA  T  T     +    SP  SL+W  KNG
Sbjct: 46  SAVPLLLVVMMCCGTGGATATEGT----SSASGSSPDKSLVWRDKNG 88




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11126.1 hypothetical protein TVAG_359060 [Trichomonas
vaginalis G3]
         (166 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_806591   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   1.3  
XP_813123   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   1.6  
XP_818394   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   2.8  
XP_806998   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   3.5  
XP_818662   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   5.3  
XP_815836   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   6.6  

>EAY11126.1 on XP_806591   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 272

 Score = 25.8 bits (55), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 13/51 (25%), Positives = 23/51 (45%)

Query: 28  LMEYYTGDTLANNFWASETGTAGDAILTPLSYWRDHYTGNWTNLFHVWRMD 78
           L  + TG+T     +AS +      ++  ++     Y G+  NLF +W  D
Sbjct: 90  LSRHGTGETGVKEAFASPSLVRAGEVMVAIAEGLFEYNGHENNLFGIWSPD 140



>EAY11126.1 on XP_813123   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1048

 Score = 25.8 bits (55), Expect = 1.6,   Method: Composition-based stats.
 Identities = 12/24 (50%), Positives = 14/24 (58%)

Query: 22  SCGEIDLMEYYTGDTLANNFWASE 45
           S  +I L     GDT ANNF A+E
Sbjct: 146 STSDISLFRMQLGDTAANNFGATE 169



>EAY11126.1 on XP_818394   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1059

 Score = 25.0 bits (53), Expect = 2.8,   Method: Composition-based stats.
 Identities = 11/24 (45%), Positives = 14/24 (58%)

Query: 22  SCGEIDLMEYYTGDTLANNFWASE 45
           S  +I L     GDT+ NNF A+E
Sbjct: 146 STSDISLFRMQLGDTIENNFGATE 169



>EAY11126.1 on XP_806998   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 184

 Score = 24.3 bits (51), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 7/40 (17%)

Query: 22  SCGEIDLMEYYTGDTLANNFWASETGTAGDAILTPLSYWR 61
           S  +I L     GDT+ANNF     GT G  +L P +  +
Sbjct: 146 STSDISLFRMQLGDTVANNF-----GTTG--VLRPTTLVQ 178



>EAY11126.1 on XP_818662   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1038

 Score = 24.3 bits (51), Expect = 5.3,   Method: Composition-based stats.
 Identities = 11/24 (45%), Positives = 14/24 (58%)

Query: 22  SCGEIDLMEYYTGDTLANNFWASE 45
           S  +I L   + GDT ANNF  +E
Sbjct: 144 STSDISLFCMHLGDTTANNFGTTE 167



>EAY11126.1 on XP_815836   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 240

 Score = 23.5 bits (49), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 11/24 (45%), Positives = 13/24 (54%)

Query: 22  SCGEIDLMEYYTGDTLANNFWASE 45
           S  +I L     GDT ANNF  +E
Sbjct: 146 STSDISLFCMQLGDTAANNFGTTE 169




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11127.1 hypothetical protein TVAG_359070 [Trichomonas
vaginalis G3]
         (311 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001349032  PfEMP1  (Establishment)  [Plasmodium falciparum]         30   0.14 
XP_812613   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.20 
XP_817719   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.28 
XP_812615   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.66 
XP_822006   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   1.1  
XP_001610714  variant erythrocyte surface antigen-1, alpha subun...    26   4.6  
XP_812811   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   6.8  
XP_812794   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   7.1  

>EAY11127.1 on XP_001349032  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2267

 Score = 30.4 bits (67), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 1/81 (1%)

Query: 49   FTQKFETINKLIREKEANLQNLQLNSLQRADNELLNNNKRIKEILEDTQTITQSTREIHD 108
            F +  +T   L   K      +   +++R  N  + N +  K++ E      +++    D
Sbjct: 1386 FEEPLKTFGPLEYCKTCPFNGVNC-TVRRGTNGCIENGQIWKKVFEGISGNGENSTITVD 1444

Query: 109  TIDRNIRIYQKYLDDSQYLMK 129
             IDR     +KYL DS  L K
Sbjct: 1445 MIDRRGPFIEKYLGDSNDLFK 1465



>EAY11127.1 on XP_812613   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1038

 Score = 30.0 bits (66), Expect = 0.20,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 6/120 (5%)

Query: 151 SRTAEQKEEELNEIQFEISDL---EDEKQAVTGIISQLSSENSEFENEIAQLKVQITQFQ 207
           S  +E K EE      E+++    E E+  V G +   SS        I++  +     +
Sbjct: 724 SVASESKSEESAASYEELTESDTDEQEEGIVNGPVPAASSSTLFAGASISESAIAAQSAE 783

Query: 208 NSIASDKATQDQLKASNAQPLMELKRQISLIRKENKKNLKDEDKKNYKIYQDVKKESESN 267
           NS + D A     + S    L E K  +   ++++    +D   +   ++ DV+K SESN
Sbjct: 784 NSFSEDNAQPSGDETSWQTTLNEAKESM---QRDSDVQPQDLQSEKLTVFSDVEKSSESN 840



>EAY11127.1 on XP_817719   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1053

 Score = 29.6 bits (65), Expect = 0.28,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 8/121 (6%)

Query: 151 SRTAEQKEEE----LNEIQFEISDLEDEKQAVTGIISQLSSENSEFENEIAQLKVQITQF 206
           S  +E K EE      E+  + +D E E+  V G +    S        I++  +     
Sbjct: 739 SVASESKSEESAASYEELTEDDTD-EQEEGIVNGPVPAAPSSTLVAGASISESAIAAQSA 797

Query: 207 QNSIASDKATQDQLKASNAQPLMELKRQISLIRKENKKNLKDEDKKNYKIYQDVKKESES 266
           +NS + D A   + + S    L E K  +   ++++    +D   +   ++ DV+K SES
Sbjct: 798 ENSFSEDNAQPSEGETSWQTTLNEAKESM---QRDSDVQPQDLQSEKLTVFSDVEKSSES 854

Query: 267 N 267
           N
Sbjct: 855 N 855



>EAY11127.1 on XP_812615   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1116

 Score = 28.5 bits (62), Expect = 0.66,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 53/121 (43%), Gaps = 8/121 (6%)

Query: 151 SRTAEQKEEELNEIQFEISDLEDEKQAVTGIISQ---LSSENSEFEN-EIAQLKVQITQF 206
           S  +E K EE      E+   +D  + V GI++     +  ++ F    I++  +     
Sbjct: 802 SVASESKSEETTAASHELPG-DDNDEQVEGIVNDPVPAAPSSTLFAGASISESAIAAEIA 860

Query: 207 QNSIASDKATQDQLKASNAQPLMELKRQISLIRKENKKNLKDEDKKNYKIYQDVKKESES 266
           +NS+  + A   + K      L E K  +   ++++    +D   +   ++ DV+K SES
Sbjct: 861 ENSLPENNAQLSEGKTVQQAALNEAKESM---QRDSDVQPQDLQSEKLTVFSDVEKSSES 917

Query: 267 N 267
           N
Sbjct: 918 N 918



>EAY11127.1 on XP_822006   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 845

 Score = 27.7 bits (60), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 37/160 (23%), Positives = 63/160 (39%), Gaps = 29/160 (18%)

Query: 3   GHFFHVKRTRIKDTIDTQQNDELNEVNQLKFQIQEAEKEIEFKNQLFTQKFETINKLIRE 62
           G  F  +  + ++T+D+     L EVN   F + EA+                     ++
Sbjct: 78  GKHFAWRDKKGEETVDSLHAPALVEVNGGVFAVAEAQ-------------------CTKD 118

Query: 63  KEANLQNLQLNSLQRADNELLN-NNKRIKEILEDTQTITQSTREIHDTIDRNIRIYQKYL 121
           +E     +         +ELL  N + +KE L +++  TQ   E   + +R         
Sbjct: 119 EECVFTGIA--------SELLEFNGETLKEELHESKLKTQVLDECSASEERQCPSQAVEP 170

Query: 122 DDSQYLMKI-LPNETESVYDFAVKMLYFKFSRTAEQKEEE 160
           D SQ +MK+ +   T  V    + ML   +SRTA    +E
Sbjct: 171 DSSQRVMKLRVGRPTTLVKGSDIYMLVGNYSRTAATNPKE 210



>EAY11127.1 on XP_001610714  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1231

 Score = 25.8 bits (55), Expect = 4.6,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 22/40 (55%)

Query: 252 KNYKIYQDVKKESESNRKNLNTIRAQRQKLQNQIDKLNQD 291
           K  K  Q VK+E E  +  L+T + + +K +  ++KL  +
Sbjct: 624 KEKKAIQGVKRELEKAKGALDTAKGKLEKAKKALEKLTTN 663



>EAY11127.1 on XP_812811   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 814

 Score = 25.0 bits (53), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 11/89 (12%)

Query: 1   MNGHFFHVKRTRIKDTIDTQQNDELNEVNQLKFQIQEA------EKEIEFKNQLFTQKFE 54
           + G  F  + T  ++T+D+     L EVN   F + EA      E E    N  FT+   
Sbjct: 76  LPGKHFVWRDTTGEETVDSLYAPSLVEVNGKVFAVAEALCKKKNEGE---GNYYFTEIAS 132

Query: 55  TINKLIRE--KEANLQNLQLNSLQRADNE 81
            + +L  E  K  NL  L+  +L++  +E
Sbjct: 133 ELLELSGENPKMLNLSKLKTQTLEKCSSE 161



>EAY11127.1 on XP_812794   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 936

 Score = 25.0 bits (53), Expect = 7.1,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 4/74 (5%)

Query: 120 YLDDSQYLMKILPNETESVYDFAVKMLYFKFSR--TAEQKEEELNEIQFEISDLEDEKQA 177
           +L D+ +++ I P   +  +D A   L +K  +  T ++KE+EL  + +E     DE + 
Sbjct: 456 WLTDNTHIVDIGPVSGDD-HDAAASSLLYKSGKSGTDDKKEDELIAL-YEKKKGGDEGKP 513

Query: 178 VTGIISQLSSENSE 191
             G++S L +E  E
Sbjct: 514 SPGLVSVLLTEQLE 527




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11128.1 CAMK family protein kinase [Trichomonas
vaginalis G3]
         (418 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    52   2e-08
XP_001349035  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   6.2  

>EAY11128.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 52.4 bits (124), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 4/102 (3%)

Query: 105 IRHIFVELISTLQYLHEDLKMAHRDIKLENIIFDTYGNI-RLIDFGLGNTFQQTDGILQT 163
           I++   +L+  + Y H    + HRDIK  N++ D    I RLID+GL   F   +     
Sbjct: 149 IKYYIYQLLKAMNYCHSQ-GIMHRDIKPHNVMIDHEKKILRLIDWGLAE-FYHPEQEYSV 206

Query: 164 ACGSPAYAPPEMFL-RRPYTNAADIWSAGCVIYALATNTLPF 204
              +  Y  PE+ +  R Y  + DIWS GC++  +     PF
Sbjct: 207 RVATRYYKGPELLVDMRYYDYSLDIWSIGCMLAGIIFKKEPF 248



>EAY11128.1 on XP_001349035  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2239

 Score = 25.8 bits (55), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 376  FGKAMNPVTGVSKFSATVKLSNRMNSMK 403
              K M P T + KF A++K ++  NS K
Sbjct: 1564 LNKIMKPCTSLDKFKASLKCNSTENSEK 1591




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11134.1 hypothetical protein TVAG_359140 [Trichomonas
vaginalis G3]
         (247 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_803373  VSG  (Establishment)  [Trypanosoma brucei]                  33   0.013
XP_816570   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.18 
XP_001608668  variant erythrocyte surface antigen-1, alpha subun...    27   1.3  
XP_001609666  variant erythrocyte surface antigen-1, alpha subun...    26   2.6  

>EAY11134.1 on XP_803373  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 499

 Score = 33.1 bits (74), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 11/80 (13%)

Query: 175 AIEAMYNEKRLQARQR--QQKELQILQEKLIKKLKAL----ET---SKKEDLVEREKALN 225
           A+E +YN  +  A Q   +QKELQ L+EK  K LKA     ET   +K+E+   R  A N
Sbjct: 122 ALERLYNSTKATAGQAAEKQKELQSLKEKAEKFLKAAVFGHETATEAKEENFDTRANACN 181

Query: 226 VS--VRAAEQKRANKLQSIV 243
                +AA Q  A  L  + 
Sbjct: 182 GGGNAKAASQNLAQALACVC 201



>EAY11134.1 on XP_816570   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 718

 Score = 29.6 bits (65), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 16/74 (21%), Positives = 33/74 (44%), Gaps = 6/74 (8%)

Query: 14  YYDEMTVPEINDFIQALIQDLQFEAVPIAQKAIKNKQQNAEIEAKETIENNFKTECVEAK 73
           ++  +++P   D + A + D     V I       +  NAE++  E ++  FK     +K
Sbjct: 480 FFSGLSIP--TDGLVAFLSDSATPGVWIDMY----RCVNAEVKGAEKVDYGFKFPGSGSK 533

Query: 74  DLYEIQLNDLEKQY 87
            ++ +    L +QY
Sbjct: 534 GIWPVNRKKLNRQY 547



>EAY11134.1 on XP_001608668  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1337

 Score = 26.9 bits (58), Expect = 1.3,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 66/150 (44%), Gaps = 30/150 (20%)

Query: 81  NDLEKQYKAKEIQIREKIDEAFKKMK---------EMHIEQLVEIEKKFAAAIIKSQEKP 131
           N +E   K +  +++E +     K+K         E   E+L ++ K   + ++  Q   
Sbjct: 646 NPMEHDRKCRVDKVKEDLVGLVNKVKVGLEGNKDEEADGEELFDVLKAIGSVVV--QLGN 703

Query: 132 VKEQLEIEEQARRI----ARDGDIESAIKYRKMAEETKV----KVLDQRRDAIEAMYNEK 183
            +E LE + +++ I     + G+ +  ++  K A E++V    K L++ + A+E    E 
Sbjct: 704 AQEALEGKAESKVIEGVKQKLGEAKKELEKAKEAVESEVGMDGKELEEAKKAVEKAKTEG 763

Query: 184 RLQARQRQQKELQILQEKLIKKLKALETSK 213
                        +   KL KK+KALE +K
Sbjct: 764 D-----------NVRMAKLEKKMKALENAK 782



>EAY11134.1 on XP_001609666  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1269

 Score = 25.8 bits (55), Expect = 2.6,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 57  AKETIENNFKTECVEAKDLYEIQLNDLEKQYKAKEIQIREKIDEAFKKMKE 107
            K+T+    K + +E      +QL + ++  + K+  + EK+ EA +K KE
Sbjct: 602 GKDTLAEKLK-DVLEKIGEVVVQLGNAQEALETKDKDVIEKVKEALRKAKE 651




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11136.1 hypothetical protein TVAG_359160 [Trichomonas
vaginalis G3]
         (92 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    25   0.58 
XP_001351876  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   2.6  
XP_001350935  PfEMP1  (Establishment)  [Plasmodium falciparum]         23   3.8  

>EAY11136.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 25.4 bits (54), Expect = 0.58,   Method: Composition-based stats.
 Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 8/76 (10%)

Query: 16  NIPIELKGYEILDVIGKGGFAVVVKAIHKNSKRVCAIKIIDRNELTNSGMLNYLESELRL 75
           N+P     YEI+  IG+G F+ V + ++  +K  C IKI+   +         +   LR 
Sbjct: 50  NVP---DSYEIVRKIGRGKFSEVFEGLNTVTKDKCVIKILKPVKKKKIKREIKILQNLR- 105

Query: 76  ASRFNHPNIAKVYDII 91
                 PNI K+ DI+
Sbjct: 106 ----GGPNIIKLLDIV 117



>EAY11136.1 on XP_001351876  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3164

 Score = 23.5 bits (49), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 8/56 (14%)

Query: 42   IHKNSKRVC--------AIKIIDRNELTNSGMLNYLESELRLASRFNHPNIAKVYD 89
            +++  KRVC         I  +D  E+      NYL + +R+A+R    +I K ++
Sbjct: 2545 LYQEKKRVCIPPRRENMCISNLDEIEIAKVNQSNYLLNMVRIAARNEGIDIIKNFN 2600



>EAY11136.1 on XP_001350935  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2268

 Score = 23.1 bits (48), Expect = 3.8,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 19  IELKGYEILDVIGKGGFAVV-VKAIHKNSKRVCAIKIIDRNE 59
           IE   Y +LD++ KGG  +  +K +H +++ +  IK +  +E
Sbjct: 688 IEFSPYGVLDLVLKGGNLLQNIKDVHGDTEDIKYIKDLLNDE 729




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11143.1 hypothetical protein TVAG_498370 [Trichomonas
vaginalis G3]
         (82 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_817001   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   4.5  
XP_817003   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           22   8.4  

>EAY11143.1 on XP_817001   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 928

 Score = 22.3 bits (46), Expect = 4.5,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 19/36 (52%)

Query: 36  FLLSDVKKKYKETFGIVKTFDILSEEIEATKLFRIS 71
           F L   KKK  ET   VKT  ++   + AT  +++S
Sbjct: 252 FPLEGTKKKNDETEKEVKTASLIIHNLAATPSWKLS 287



>EAY11143.1 on XP_817003   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 931

 Score = 21.6 bits (44), Expect = 8.4,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 19/36 (52%)

Query: 36  FLLSDVKKKYKETFGIVKTFDILSEEIEATKLFRIS 71
           F L   KKK  ET   VKT  ++   + AT  +++S
Sbjct: 253 FPLEVTKKKNDETEKEVKTASLIIHNLAATPSWKLS 288




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11145.1 hypothetical protein TVAG_498390 [Trichomonas
vaginalis G3]
         (459 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351319  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   5.0  

>EAY11145.1 on XP_001351319  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2646

 Score = 26.2 bits (56), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 9/16 (56%), Positives = 12/16 (75%)

Query: 95  KCHGKNAEERWCEARR 110
           KC GKN EE++C+  R
Sbjct: 359 KCRGKNGEEKYCDLNR 374




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11147.1 Nucleoside diphosphate kinase family protein
[Trichomonas vaginalis G3]
         (375 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_829776  VSG  (Establishment)  [Trypanosoma brucei]                  26   3.2  

>EAY11147.1 on XP_829776  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 471

 Score = 26.2 bits (56), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 259 IVGEGFTIAGAVMTTLEIPTAGEFLEVYKTVVGDYS----DMVSELASGLL 305
           I  +GFTIAG  +    +   G  L   KT  G  S    +   E+A+GL+
Sbjct: 182 INSKGFTIAGLTVKACAVTNKGCRLHTRKTSEGIISTGSPEQTKEIAAGLI 232




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11155.1 hypothetical protein TVAG_498490 [Trichomonas
vaginalis G3]
         (285 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001347288  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   1.1  
XP_001351513  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   7.9  
XP_001351514  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   8.3  

>EAY11155.1 on XP_001347288  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2241

 Score = 27.3 bits (59), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 16/65 (24%)

Query: 170 DKDSKSLFERMAKKIIEEEANTSKVY-------------FGMKIRIF---CNIINERKHM 213
           DKD+K +F+R+ K++ +E  N + V+             FG +   F   C +I E++  
Sbjct: 16  DKDAKYMFDRIGKEVHDEVKNAANVFKDYLKGNLTISTIFGEETVAFTDPCELIKEKRDE 75

Query: 214 IAGKR 218
           +   R
Sbjct: 76  LLAAR 80



>EAY11155.1 on XP_001351513  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2152

 Score = 24.6 bits (52), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 12/31 (38%), Positives = 18/31 (58%)

Query: 167 GSIDKDSKSLFERMAKKIIEEEANTSKVYFG 197
           G  DKD+K L + + K + E+  N +K Y G
Sbjct: 15  GIDDKDAKHLLDSIGKIVHEQVKNDAKTYKG 45



>EAY11155.1 on XP_001351514  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2201

 Score = 24.6 bits (52), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 12/31 (38%), Positives = 18/31 (58%)

Query: 167 GSIDKDSKSLFERMAKKIIEEEANTSKVYFG 197
           G  DKD+K L + + K + E+  N +K Y G
Sbjct: 15  GIDDKDAKHLLDSIGKIVHEQVKNDAKTYKG 45




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11174.1 hypothetical protein TVAG_498680 [Trichomonas
vaginalis G3]
         (124 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_821078   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   0.052
XP_001351515  PfEMP1  (Establishment)  [Plasmodium falciparum]         25   1.2  
XP_822017   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   8.9  

>EAY11174.1 on XP_821078   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 940

 Score = 29.3 bits (64), Expect = 0.052,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)

Query: 2   ESENLDILAENTIYRAIMDNDKDRFI-FHAEKEGFDKD 38
           E E+ D  A + +Y++  +N+K+  I  + +KEG DKD
Sbjct: 406 EKEDEDAAASSLLYKSADNNEKEELIALYEKKEGGDKD 443



>EAY11174.1 on XP_001351515  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2181

 Score = 25.4 bits (54), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 11/30 (36%), Positives = 15/30 (50%)

Query: 60  CYYGAVDCFKLLRTKFRSEITETCLEFSFL 89
           C    +DC K +R K+   I   C + SFL
Sbjct: 341 CSGNGLDCTKTIRAKYIYAIGSECTKCSFL 370



>EAY11174.1 on XP_822017   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 990

 Score = 22.7 bits (47), Expect = 8.9,   Method: Composition-based stats.
 Identities = 9/32 (28%), Positives = 20/32 (62%)

Query: 3   SENLDILAENTIYRAIMDNDKDRFIFHAEKEG 34
           SE  D+ A + +Y++  +N+K+    + +K+G
Sbjct: 512 SEEDDVAASSLLYKSGDNNEKELIALYEKKKG 543




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11188.1 hypothetical protein TVAG_498820 [Trichomonas
vaginalis G3]
         (346 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAM47175  Rh4  (Adhesin)  [Plasmodium falciparum]                      27   2.9  
AAM47192  Rh4  (Adhesin)  [Plasmodium falciparum]                      27   2.9  
AAM47174  Rh4  (Adhesin)  [Plasmodium falciparum]                      27   3.0  
XP_827755  VSG  (Establishment)  [Trypanosoma brucei]                  25   7.1  

>EAY11188.1 on AAM47175  Rh4  (Adhesin)  [Plasmodium falciparum]
          Length = 1711

 Score = 26.6 bits (57), Expect = 2.9,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 3/60 (5%)

Query: 247 ERYTDELVQIL--IEGKL-QTETIKEIRVHLYELLVHCVPPTEILRRIVHGILHQIDSNL 303
           ++Y DEL+ I   I+ K+  T  I+ I+  L   +  C P   I    ++ +  +I +NL
Sbjct: 694 KKYIDELIPITQQIQTKMYTTNNIEHIKQILINYIQECKPIQNISEHTIYTLYQEIKTNL 753



>EAY11188.1 on AAM47192  Rh4  (Adhesin)  [Plasmodium falciparum]
          Length = 1716

 Score = 26.6 bits (57), Expect = 2.9,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 3/60 (5%)

Query: 247 ERYTDELVQIL--IEGKL-QTETIKEIRVHLYELLVHCVPPTEILRRIVHGILHQIDSNL 303
           ++Y DEL+ I   I+ K+  T  I+ I+  L   +  C P   I    ++ +  +I +NL
Sbjct: 696 KKYIDELIPITQQIQTKMYTTNNIEHIKQILINYIQECKPIQNISEHTIYTLYQEIKTNL 755



>EAY11188.1 on AAM47174  Rh4  (Adhesin)  [Plasmodium falciparum]
          Length = 1711

 Score = 26.6 bits (57), Expect = 3.0,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 3/60 (5%)

Query: 247 ERYTDELVQIL--IEGKL-QTETIKEIRVHLYELLVHCVPPTEILRRIVHGILHQIDSNL 303
           ++Y DEL+ I   I+ K+  T  I+ I+  L   +  C P   I    ++ +  +I +NL
Sbjct: 696 KKYIDELIPITQQIQTKMYTTNNIEHIKQILINYIQECKPIQNISEHTIYTLYQEIKTNL 755



>EAY11188.1 on XP_827755  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 510

 Score = 25.0 bits (53), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 11/23 (47%), Positives = 14/23 (60%)

Query: 12  HNLDDLTIQSNANELLKSISGSF 34
           HN+DD T  S A EL+K I   +
Sbjct: 350 HNIDDPTDNSKAKELIKWIEKGY 372




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11191.1 hypothetical protein TVAG_498850 [Trichomonas
vaginalis G3]
         (1308 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_846273  VSG  (Establishment)  [Trypanosoma brucei]                  29   1.5  

>EAY11191.1 on XP_846273  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 490

 Score = 29.3 bits (64), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 7/60 (11%)

Query: 908 NGDMQMKVFFTIDPPMKFSPLVTGKDSAETTQITERAERWMKTMLENEITRPRYLSLLTH 967
            GD+Q+       P  KF+    G  +A     +   E  +KT LE+E   P    L+TH
Sbjct: 139 GGDLQL-------PASKFTSRTLGGINANACCSSNNGEEGVKTDLEHEPKEPEPTKLITH 191




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11195.1 Kelch motif family protein [Trichomonas
vaginalis G3]
         (389 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_820773   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.25 
XP_808824   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           30   0.36 
XP_811304   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   0.47 
XP_813143   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   0.50 
XP_821148   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   0.53 
XP_806966   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           29   0.59 
XP_804821   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.66 
XP_820017   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.69 
XP_807799   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.70 
XP_812517   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   0.87 
XP_820145   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   1.0  
XP_818193   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   1.2  
XP_814625   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   1.4  
XP_806412   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.7  
XP_816823   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.8  
XP_808800   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   1.8  
XP_815498   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.5  
XP_812514   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.7  
XP_809062   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   3.0  
XP_816177   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   3.7  
XP_805179   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   3.7  
XP_821669   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   4.8  
XP_808213   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   5.0  
XP_812811   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   6.8  
XP_001611736  variant erythrocyte surface antigen-1, alpha subun...    25   8.7  
XP_844693  VSG  (Establishment)  [Trypanosoma brucei]                  25   9.2  

>EAY11195.1 on XP_820773   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 779

 Score = 30.0 bits (66), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 17/119 (14%)

Query: 52  NQPFVGIWSVH-MPEGTTPLPRTGFFSAEDKNSHKCYIGCGINKDNIFLNDVWMLDCTTH 110
           N   V   SVH  PEG TP+P  G  + ++KN     +G   +K+       W + C+  
Sbjct: 578 NFTLVATVSVHGEPEGDTPIPLMGAKTNDNKNP--VLLGLSYDKEG-----KWQVLCSDG 630

Query: 111 LWKLLRTSGSKISPRTGSCAVVYQNHLIIYGGYNSTDYINDMYAIDLNTLVINRLDTKG 169
             K LR   S   P T      +Q  +++  G   + Y++     D  +  +   D+KG
Sbjct: 631 TTKELR---SNWEPET-----THQVAIVLRNGKQGSAYVDGKRVGDA-SCELKSTDSKG 680



>EAY11195.1 on XP_808824   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 777

 Score = 29.6 bits (65), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 17/119 (14%)

Query: 52  NQPFVGIWSVH-MPEGTTPLPRTGFFSAEDKNSHKCYIGCGINKDNIFLNDVWMLDCTTH 110
           N   V   SVH  P+G TP+P  G    ++KN+    +G   +K+       W + C   
Sbjct: 576 NFTLVATLSVHGEPKGDTPIPVMGATMNDNKNT--VLLGLSYDKEG-----KWQVLCGGK 628

Query: 111 LWKLLRTSGSKISPRTGSCAVVYQNHLIIYGGYNSTDYINDMYAIDLNTLVINRLDTKG 169
             K LR   S   P T      +Q  +++  G   + Y++     D  +  +N  D+KG
Sbjct: 629 TTKELR---SNWKPET-----THQVAIVLRNGKQGSVYVDGQRVGDA-SCELNNTDSKG 678



>EAY11195.1 on XP_811304   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 892

 Score = 29.3 bits (64), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 51/150 (34%), Gaps = 29/150 (19%)

Query: 52  NQPFVGIWSVH-MPEGTTPLPRTGFFSAEDKNSHKCYIGCGINKDNIFLNDVWMLDCTTH 110
           N   V   S+H +PEG TP+P  G    ++      ++G   N  N      W L C   
Sbjct: 671 NFTLVATVSIHKVPEGGTPIPLMGVKKKKNGAGSSVFLGLSYNNKN-----KWQLRCGDE 725

Query: 111 LWKLLRTSGSKISPRTGSCAVVYQNHLIIYGGYNSTDYINDMYAIDLNTLVINRLDTKGD 170
             K    S S     T   A+V +N      G  S+ Y++                  GD
Sbjct: 726 --KTTEHSSSWKPETTHHVAIVLRN------GNQSSAYVDGQR-------------VGGD 764

Query: 171 VPCGRSSPIFDVIGDQLFLWGGFNGDWPNR 200
            PC   S     I    F  GG  G   N+
Sbjct: 765 APCTLGSTDLREISH--FYIGGDGGSTENK 792



>EAY11195.1 on XP_813143   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 795

 Score = 28.9 bits (63), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 43/123 (34%), Gaps = 27/123 (21%)

Query: 52  NQPFVGIWSVH-MPEGTTPLPRTGFFSAEDKNSHKCYIGCGINKDNIFLNDVWMLDCTTH 110
           N   V   S+H +PEG TP+P  G    ++      ++G   N  N      W L C   
Sbjct: 574 NFTLVATVSIHKVPEGGTPIPLMGVKKKKNGAGSSVFLGLSYNNKN-----KWQLRCGDE 628

Query: 111 LWKLLRTSGSKISPRTGSCAVVYQNHLIIYGGYNSTDYINDMYAIDLNTLVINRLDTKGD 170
             K    S S     T   A+V +N      G  S+ Y++                  GD
Sbjct: 629 --KTTEHSSSWKPETTHHVAIVLRN------GNQSSAYVDGQR-------------VGGD 667

Query: 171 VPC 173
            PC
Sbjct: 668 APC 670



>EAY11195.1 on XP_821148   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 924

 Score = 28.9 bits (63), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 17/66 (25%)

Query: 52  NQPF---------VGIWSVH-MPEGTTPLPRTGFFSAEDKNSHKCYIGCGINKDNIFLND 101
           NQP+         V   S+H +PEG TP+P  G     D N  K  +G   NK+      
Sbjct: 563 NQPYHFANYNFTLVATVSIHNLPEGDTPIPLLGVKMNGDNN--KVLLGLSYNKERK---- 616

Query: 102 VWMLDC 107
            W L C
Sbjct: 617 -WQLSC 621



>EAY11195.1 on XP_806966   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 777

 Score = 28.9 bits (63), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 17/119 (14%)

Query: 52  NQPFVGIWSVH-MPEGTTPLPRTGFFSAEDKNSHKCYIGCGINKDNIFLNDVWMLDCTTH 110
           N   V   SVH +P+G TP+P  G    ++KN     +G   +K+       W + C   
Sbjct: 577 NFTLVATVSVHGVPKGDTPIPLMGATMNDNKNP--VLLGLSYDKEG-----KWQVLCGGK 629

Query: 111 LWKLLRTSGSKISPRTGSCAVVYQNHLIIYGGYNSTDYINDMYAIDLNTLVINRLDTKG 169
             K LR   S   P T      +Q  +++  G   + Y++     D +  + N  D+KG
Sbjct: 630 TTKELR---SNWEPET-----THQVAIVLRNGKQGSAYVDGQRVGDASCELKN-TDSKG 679



>EAY11195.1 on XP_804821   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 731

 Score = 28.5 bits (62), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 17/119 (14%)

Query: 52  NQPFVGIWSVH-MPEGTTPLPRTGFFSAEDKNSHKCYIGCGINKDNIFLNDVWMLDCTTH 110
           N   V   SVH +P+G TP+P  G    ++KN     +G   +K+       W + C   
Sbjct: 579 NFTLVATVSVHGVPKGDTPIPLMGATMNDNKNP--VLLGLSYDKEG-----KWQVLCGGK 631

Query: 111 LWKLLRTSGSKISPRTGSCAVVYQNHLIIYGGYNSTDYINDMYAIDLNTLVINRLDTKG 169
             K LR   S   P T      +Q  +++  G   + Y++     D +  + N  D+KG
Sbjct: 632 TTKELR---SNWEPET-----THQVAIVLRNGKQGSAYVDGQRVGDASCELKN-TDSKG 681



>EAY11195.1 on XP_820017   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 779

 Score = 28.5 bits (62), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 49/119 (41%), Gaps = 17/119 (14%)

Query: 52  NQPFVGIWSVH-MPEGTTPLPRTGFFSAEDKNSHKCYIGCGINKDNIFLNDVWMLDCTTH 110
           N   V   S+H  PEG TP+P  G    + KN+    +G   +K+       W + C   
Sbjct: 578 NFTLVATVSIHGEPEGDTPIPLMGATMNDGKNT--VLLGLSYDKEG-----KWQMLCGGK 630

Query: 111 LWKLLRTSGSKISPRTGSCAVVYQNHLIIYGGYNSTDYINDMYAIDLNTLVINRLDTKG 169
             K LR   S   P T      +Q  +++  G   + Y++     D +  + N  D+KG
Sbjct: 631 TTKELR---SDWEPGT-----THQVAIVLRNGSQGSAYVDGQRVGDASCELKN-TDSKG 680



>EAY11195.1 on XP_807799   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 345

 Score = 28.5 bits (62), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 49/119 (41%), Gaps = 17/119 (14%)

Query: 52  NQPFVGIWSVH-MPEGTTPLPRTGFFSAEDKNSHKCYIGCGINKDNIFLNDVWMLDCTTH 110
           N   V   S+H  PEG TP+P  G    + KN+    +G   +K+       W + C   
Sbjct: 144 NFTLVATVSIHGEPEGDTPIPLMGATMNDGKNT--VLLGLSYDKEG-----KWQMLCGGK 196

Query: 111 LWKLLRTSGSKISPRTGSCAVVYQNHLIIYGGYNSTDYINDMYAIDLNTLVINRLDTKG 169
             K LR   S   P T      +Q  +++  G   + Y++     D +  + N  D+KG
Sbjct: 197 TTKELR---SNWEPGT-----THQVAIVLRNGSQGSAYVDGQRVGDASCELKN-TDSKG 246



>EAY11195.1 on XP_812517   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 924

 Score = 28.5 bits (62), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 31/127 (24%), Positives = 48/127 (37%), Gaps = 25/127 (19%)

Query: 62  HMPEGTTPLPRTGFFSAEDKNSHKCYIG------------CGINKDNIFLNDVWMLDCTT 109
            MPEG TP+P  G  +  + + +   +G            CG  K    L+  W  +   
Sbjct: 581 KMPEGNTPIPLMGVRAGSNGDENNVLLGLSYDSEKKWHVLCGDGKTE-ELSSTWETETPQ 639

Query: 110 HLWKLLR--TSGS-----KISPRTGSCAV-----VYQNHLIIYGGYNSTDYINDMYAIDL 157
           H+  LL+  T GS     +     G CA+        +H  I G   + +   D+     
Sbjct: 640 HVVILLKNGTQGSVYVDGQRVGGNGECALGNGESKEISHFYIGGDGANAENKEDVSVTVT 699

Query: 158 NTLVINR 164
           N L+ NR
Sbjct: 700 NVLLYNR 706



>EAY11195.1 on XP_820145   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 871

 Score = 28.1 bits (61), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 13/71 (18%)

Query: 62  HMPEGTTPLPRTGFFSAEDKNS----------HKCYIGCGINKDNIFLNDVWMLDCTTHL 111
            MPEG TP+P  G     D N+           K ++ CG +K    L+  W      H+
Sbjct: 586 KMPEGDTPIPLVGVKMNGDGNNVLLELSYDSGKKWHVLCG-DKTTTKLSSTWEAGTPQHV 644

Query: 112 WKLLR--TSGS 120
             LL+  T GS
Sbjct: 645 VVLLKNGTQGS 655



>EAY11195.1 on XP_818193   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 838

 Score = 27.7 bits (60), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 49/119 (41%), Gaps = 17/119 (14%)

Query: 52  NQPFVGIWSVH-MPEGTTPLPRTGFFSAEDKNSHKCYIGCGINKDNIFLNDVWMLDCTTH 110
           N   V   SVH  P+G TP+P  G    + KN+    +G   +K+       W + C   
Sbjct: 637 NFTLVATVSVHGEPKGDTPIPLMGATMNDGKNT--VLLGLSYDKEG-----KWQVLCGGK 689

Query: 111 LWKLLRTSGSKISPRTGSCAVVYQNHLIIYGGYNSTDYINDMYAIDLNTLVINRLDTKG 169
             K LR   S   P T      +Q  +++  G   + Y++     D +  + N  D+KG
Sbjct: 690 TTKELR---SNWEPET-----THQVAIVLRNGSQGSAYVDGQRVGDASCELKN-TDSKG 739



>EAY11195.1 on XP_814625   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 941

 Score = 27.7 bits (60), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 30/84 (35%), Gaps = 16/84 (19%)

Query: 28  SYEEVASHGFSDVSDNDNTAGKTINQPFVGIWS----------VHMPEGTTPLPRTGFFS 77
           S EEV +    D    D   G    QP VG  +          +  PEGT   P  G  S
Sbjct: 818 SSEEVQT---VDAETGDTVQGDGTQQPSVGTSATADTNAPTAEIMAPEGTAVTPEVGAHS 874

Query: 78  AEDKNSHKCYIGCGINKDNIFLND 101
            ED  +     G  + K+ I   +
Sbjct: 875 GEDGETRG---GTDVQKEGIHAQE 895



>EAY11195.1 on XP_806412   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 619

 Score = 27.3 bits (59), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 19/102 (18%)

Query: 52  NQPFVGIWSVH-MPEGTTPLPRTGFFSAEDKNSHKCYIGCGINKDNIFLNDVWMLDCTTH 110
           N   V   S+H  PEG TP+P  G        S   ++G   NK+               
Sbjct: 352 NFTLVATVSIHKAPEGVTPIPLMGVKKMNGGKS-TVFLGLSYNKE--------------R 396

Query: 111 LWKLLRTSGSK--ISPRTGSCAVVYQNHLIIYGGYNSTDYIN 150
            W+LL++ G++  +S   G+ A  +Q  +++  G   + Y++
Sbjct: 397 KWELLQSGGTRNALSGTWGTDA-THQVAIVLQNGKQGSAYVD 437



>EAY11195.1 on XP_816823   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 772

 Score = 27.3 bits (59), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 17/119 (14%)

Query: 52  NQPFVGIWSVH-MPEGTTPLPRTGFFSAEDKNSHKCYIGCGINKDNIFLNDVWMLDCTTH 110
           N   V   S+H  P+G TP+P  G    ++KN+    +G   +K+       W + C   
Sbjct: 571 NFTLVATVSIHGEPKGDTPIPLMGATMNDNKNT--VLLGLSYDKEG-----KWQVLCGGK 623

Query: 111 LWKLLRTSGSKISPRTGSCAVVYQNHLIIYGGYNSTDYINDMYAIDLNTLVINRLDTKG 169
             K LR   S   P T      +Q  +++  G   + Y++     D +  + N  D+KG
Sbjct: 624 TTKELR---SNWEPGT-----THQVAIVLRNGKQGSAYVDGQRVGDASCELKN-TDSKG 673



>EAY11195.1 on XP_808800   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 776

 Score = 27.3 bits (59), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 17/119 (14%)

Query: 52  NQPFVGIWSVH-MPEGTTPLPRTGFFSAEDKNSHKCYIGCGINKDNIFLNDVWMLDCTTH 110
           N   V   S+H +P+G TP+P  G    ++KN     +G   +K+       W + C   
Sbjct: 575 NFTLVATVSIHGVPKGDTPIPLMGATMNDNKNP--VLLGLSYDKEG-----KWQVLCGGK 627

Query: 111 LWKLLRTSGSKISPRTGSCAVVYQNHLIIYGGYNSTDYINDMYAIDLNTLVINRLDTKG 169
             K LR   S   P T      +Q  +++  G   + Y++     D +  + N  D+KG
Sbjct: 628 TTKELR---SNWEPGT-----THQVAIVLRNGKQGSAYVDGQRVGDASCELKN-TDSKG 677



>EAY11195.1 on XP_815498   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 822

 Score = 26.9 bits (58), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 20/92 (21%), Positives = 35/92 (38%), Gaps = 13/92 (14%)

Query: 62  HMPEGTTPLPRTGFFSAEDKNSHKCYIGCGINKDNIFLNDVWMLDCTTHLWKLLRTSGSK 121
            +P+  TP+P  G         +K ++G   +  N      W L C       LR+S   
Sbjct: 584 RVPKEDTPIPLMGVKKMNGAGKNKVFLGLSYSNKN-----KWQLRCGDEKTTELRSS--- 635

Query: 122 ISPRTGSCAVVYQNHLIIYGGYNSTDYINDMY 153
             P T      +Q  +++  G   T Y++  +
Sbjct: 636 WKPET-----THQVAIVLQNGTQGTAYVDGQH 662



>EAY11195.1 on XP_812514   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 925

 Score = 26.6 bits (57), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 49/127 (38%), Gaps = 25/127 (19%)

Query: 62  HMPEGTTPLPRTGFFSAEDKNSHKCYIG------------CGINKDNIFLNDVWMLDCTT 109
           ++PEG TP+P  G  +  + + +   +G            CG +K    L+  W      
Sbjct: 583 NVPEGNTPIPLMGVRAGSNGDENNVLLGLSYDSEKKWHVLCG-DKTTTKLSSTWETGTPQ 641

Query: 110 HLWKLLR--TSGS-----KISPRTGSCAV-----VYQNHLIIYGGYNSTDYINDMYAIDL 157
           H+  LL+  T GS     +     G CA+        +H  I G   + +   D+     
Sbjct: 642 HVVILLKNGTQGSVYVDGQRVGGNGECALGNGESKEISHFYIGGDGANAENKEDVSVTVT 701

Query: 158 NTLVINR 164
           N L+ NR
Sbjct: 702 NVLLYNR 708



>EAY11195.1 on XP_809062   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 930

 Score = 26.6 bits (57), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)

Query: 55  FVGIWSVH-MPEGTTPLPRTGFFSAEDKNSHKCYIG 89
            V   S+H MPEG TP+P  G  +  + + +   +G
Sbjct: 580 LVATVSIHKMPEGDTPIPLMGVRAGSNGDENNVLLG 615



>EAY11195.1 on XP_816177   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 779

 Score = 26.2 bits (56), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 25/106 (23%), Positives = 45/106 (42%), Gaps = 16/106 (15%)

Query: 64  PEGTTPLPRTGFFSAEDKNSHKCYIGCGINKDNIFLNDVWMLDCTTHLWKLLRTSGSKIS 123
           P+G TP+P  G  + ++KN     +G   +K+       W + C+    K LR   S   
Sbjct: 591 PKGDTPIPLMGAKTNDNKNP--VLLGLSYDKEG-----KWQVLCSDGTTKELR---SNWE 640

Query: 124 PRTGSCAVVYQNHLIIYGGYNSTDYINDMYAIDLNTLVINRLDTKG 169
           P T      +Q  +++  G   + Y++     D  +  +   D+KG
Sbjct: 641 PET-----THQVAIVLRNGKQGSAYVDGKRVGDA-SCELKSTDSKG 680



>EAY11195.1 on XP_805179   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 793

 Score = 26.2 bits (56), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 19/102 (18%)

Query: 52  NQPFVGIWSVH-MPEGTTPLPRTGFFSAEDKNSHKCYIGCGINKDNIFLNDVWMLDCTTH 110
           N   V   S+H  PEG TP+P  G        S   ++G   NK+               
Sbjct: 576 NFTLVATVSIHKAPEGVTPIPLMGVKKMNGGKS-TVFLGLSYNKE--------------R 620

Query: 111 LWKLLRTSGSK--ISPRTGSCAVVYQNHLIIYGGYNSTDYIN 150
            W+LL++ G++  +S   G+ A  +Q  +++  G   + Y++
Sbjct: 621 KWELLQSGGTRNALSGTWGTDA-THQVAIVLQNGKQGSVYVD 661



>EAY11195.1 on XP_821669   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 879

 Score = 25.8 bits (55), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 8/54 (14%)

Query: 55  FVGIWSVH-MPEGTTPLPRTGFFSAEDKNSHKCYIGCGINKDNIFLNDVWMLDC 107
            V   S+H  PEG TP+P  G    + KN+    +G   +K+       WML C
Sbjct: 561 LVATVSIHGEPEGATPIPLMGAKMDDGKNT--VLLGLSYDKEK-----GWMLLC 607



>EAY11195.1 on XP_808213   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 819

 Score = 25.8 bits (55), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 9/73 (12%)

Query: 63  MPEGTTPLPRTGFFSAEDKNSHKCYIGCGINKDNIFLNDVWMLDCTTHLWKLLRTSGSKI 122
           +PEG TP+P  G    + KN+    +G   N  N      W L C     K    S S  
Sbjct: 587 VPEGDTPIPLMGAKMNDGKNT--VLLGLSYNNKN-----KWQLRCGDE--KTTEHSSSWK 637

Query: 123 SPRTGSCAVVYQN 135
              T   A+V QN
Sbjct: 638 PETTHQVAIVLQN 650



>EAY11195.1 on XP_812811   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 814

 Score = 25.4 bits (54), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 10/85 (11%)

Query: 52  NQPFVGIWSVH-MPEGTTPLPRTGFFSAEDKNSHKCYIGCGINKDNIFLNDVWMLDCTTH 110
           N   V   SVH  P+G TP+P  G  +  D  +    +  G  K+       W   C+  
Sbjct: 596 NFTLVATVSVHGEPKGDTPIPLMGVRTGSDGGTKLMELSYGSEKE-------WQALCSDG 648

Query: 111 LWKLLRTSGSKISPRTGSCAVVYQN 135
             K L+++      R    A+V QN
Sbjct: 649 TTKKLKSTWD--PQRQYQVAIVLQN 671



>EAY11195.1 on XP_001611736  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1365

 Score = 25.0 bits (53), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)

Query: 29  YEEVASHGFSDVSDNDNTA-GKTINQPFVGIWSVHMPEGTTPLPRT 73
           YE     G +D S NDN A  +T+     G++S+    G T + RT
Sbjct: 65  YEGDVKEGITDSSGNDNRANAETVKGHLNGLFSLVQGLGGTAVVRT 110



>EAY11195.1 on XP_844693  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 516

 Score = 25.0 bits (53), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 14/54 (25%)

Query: 253 LCEVIQTGGPQPTSITTCSGMILAGQYV--------------LYIGGKSENSYN 292
           LC  I   G +PT +TT        ++               +++GGKS+NS+ 
Sbjct: 34  LCTAIALDGAEPTKLTTADSAETTIKHARALNMSAADETWQEIFVGGKSKNSWE 87




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11197.1 hypothetical protein TVAG_127030 [Trichomonas
vaginalis G3]
         (417 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_814755   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   1.1  
XP_001350595  PfEMP1  (Establishment)  [Plasmodium falciparum]         28   1.1  
XP_818308   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   1.6  
XP_817001   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.3  
XP_817994   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   2.9  
AAA29573  CSP  (Invasion)  [Plasmodium falciparum]                     24   7.9  
AAA29569  CSP  (Invasion)  [Plasmodium falciparum]                     25   8.7  
BAD73952  CSP  (Invasion)  [Plasmodium falciparum]                     25   9.2  
AAA29552  CSP  (Invasion)  [Plasmodium falciparum]                     25   9.2  
AAA29545  CSP  (Invasion)  [Plasmodium falciparum]                     25   9.5  

>EAY11197.1 on XP_814755   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 934

 Score = 28.1 bits (61), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 6/80 (7%)

Query: 2   NEVESLLNSTDSTFLAVALGTYNDQKEVTVLEKWLYYQDKNEMPFEYLLKLNTYI----P 57
           N+ E       S F     GT  D+K V ++   +Y + K +      L  NT+I    P
Sbjct: 350 NKQEGEGKGVGSGFTTATFGTGGDEKNVMLVTLPVYAKGKEKGVLHLWLTDNTHIVDIGP 409

Query: 58  SSEK--DMRLKNILFRHVDS 75
            S K  D    ++L++ V S
Sbjct: 410 VSGKDDDAAASSLLYKSVTS 429



>EAY11197.1 on XP_001350595  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2256

 Score = 28.1 bits (61), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 22/44 (50%)

Query: 279  SGDYNSLVNLNTEDPERERLIQVIKKKYKLTQKTSPCPWVVSSV 322
            S  YN ++N + E  ERE+ I+     Y     T+P P V  SV
Sbjct: 1124 SSTYNDIINGDKEIQEREKDIKGAISTYFSNSGTTPTPPVKPSV 1167



>EAY11197.1 on XP_818308   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 925

 Score = 27.7 bits (60), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 4/65 (6%)

Query: 2   NEVESLLNSTDSTFLAVALGTYNDQKEVTVLEKWLYYQDKNEMPFEYLLKLNTYI----P 57
           N+ E    +  S F A  +G  +D+K V ++   +Y ++  +      L  NT+I    P
Sbjct: 348 NKKEGEGKAVGSGFTAATIGVGDDEKNVMLVTLPVYSKENKKGELHLWLTDNTHIVDIGP 407

Query: 58  SSEKD 62
            S KD
Sbjct: 408 VSGKD 412



>EAY11197.1 on XP_817001   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 928

 Score = 26.9 bits (58), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 286 VNLNTEDPERERLIQVIKKKYKLTQKTSPCPWVVS 320
           V   T+D +RE LI + +KK K  +K +P P +VS
Sbjct: 420 VTSGTDDNKREELIALYEKK-KGDEKENPSPGMVS 453



>EAY11197.1 on XP_817994   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 954

 Score = 26.6 bits (57), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 34/151 (22%), Positives = 64/151 (42%), Gaps = 28/151 (18%)

Query: 13  STFLAVALGTYNDQKEVTVLEKWLYYQDKNEMPFEYL-LKLNTYI----P-SSEKDMRLK 66
           S F+   +G   D+++V +L   +Y ++  E    +L L  NT+I    P S + D    
Sbjct: 374 SGFITATVG--EDKRKVMLLTLPVYSKENVEKGELHLWLTDNTHIVDIGPVSCDDDAAAS 431

Query: 67  NILFRHVDSHQLNLGSFASIYQITNDDVKRNY--CVAIIYNLKKIDMSFEQEQQIKYFLK 124
           ++L++       N G   ++Y+   DD K ++  C  ++          EQ Q++K  L 
Sbjct: 432 SLLYKSAGIGDTNKGELIALYEKKKDDGKPSHSLCSVVLT---------EQLQRVKDVLA 482

Query: 125 QITHS---------TRSALKFQQPLQISTPL 146
               +         ++SA K   P    +P+
Sbjct: 483 TWKEADDRVSKLCPSKSAKKDASPDNACSPV 513



>EAY11197.1 on AAA29573  CSP  (Invasion)  [Plasmodium falciparum]
          Length = 115

 Score = 24.3 bits (51), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 15/81 (18%)

Query: 289 NTEDPERERLIQVIKK-KYKLTQKTSPCPWVVSSVILVS-------------QAEERIRQ 334
           N E+P  + + Q +KK +Y L+ + SPC     + I V                E  I +
Sbjct: 25  NNEEPSDKHIEQYLKKIQYSLSTEWSPCSVTCGNGIQVRIKPGSADKPKDQLDYENDIEK 84

Query: 335 RMCAL-RLESLMNIARSAIDI 354
           ++C + +  S+ N+  S+I +
Sbjct: 85  KICKMEKCSSVFNVVNSSIGL 105



>EAY11197.1 on AAA29569  CSP  (Invasion)  [Plasmodium falciparum]
          Length = 452

 Score = 25.0 bits (53), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 15/81 (18%)

Query: 289 NTEDPERERLIQVIKK-KYKLTQKTSPCPWVVSSVILVS-------------QAEERIRQ 334
           N E+P  + + Q +KK +Y L+ + SPC     + I V                E  I +
Sbjct: 362 NNEEPSDKHIEQYLKKIQYSLSTEWSPCSVTCGNGIQVRIKPGSADKPKDQLDYENDIEK 421

Query: 335 RMCAL-RLESLMNIARSAIDI 354
           ++C + +  S+ N+  S+I +
Sbjct: 422 KICKMEKCSSVFNVVNSSIGL 442



>EAY11197.1 on BAD73952  CSP  (Invasion)  [Plasmodium falciparum]
          Length = 420

 Score = 25.0 bits (53), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 15/81 (18%)

Query: 289 NTEDPERERLIQVIKK-KYKLTQKTSPCPWVVSSVILVS-------------QAEERIRQ 334
           N E+P  + + Q +KK +Y L+ + SPC     + I V                E  I +
Sbjct: 330 NNEEPSDKHIEQYLKKIQYSLSTEWSPCSVTCGNGIQVRIKPGSADKPKDQLDYENDIEK 389

Query: 335 RMCAL-RLESLMNIARSAIDI 354
           ++C + +  S+ N+  S+I +
Sbjct: 390 KICKMEKCSSVFNVVNSSIGL 410



>EAY11197.1 on AAA29552  CSP  (Invasion)  [Plasmodium falciparum]
          Length = 420

 Score = 25.0 bits (53), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 15/81 (18%)

Query: 289 NTEDPERERLIQVIKK-KYKLTQKTSPCPWVVSSVILVS-------------QAEERIRQ 334
           N E+P  + + Q +KK +Y L+ + SPC     + I V                E  I +
Sbjct: 330 NNEEPSDKHIEQYLKKIQYSLSTEWSPCSVTCGNGIQVRIKPGSADKPKDQLDYENDIEK 389

Query: 335 RMCAL-RLESLMNIARSAIDI 354
           ++C + +  S+ N+  S+I +
Sbjct: 390 KICKMEKCSSVFNVVNSSIGL 410



>EAY11197.1 on AAA29545  CSP  (Invasion)  [Plasmodium falciparum]
          Length = 436

 Score = 25.0 bits (53), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 15/81 (18%)

Query: 289 NTEDPERERLIQVIKK-KYKLTQKTSPCPWVVSSVILVS-------------QAEERIRQ 334
           N E+P  + + Q +KK +Y L+ + SPC     + I V                E  I +
Sbjct: 346 NNEEPSDKHIEQYLKKIQYSLSTEWSPCSVTCGNGIQVRIKPGSADKPKDQLDYENDIEK 405

Query: 335 RMCAL-RLESLMNIARSAIDI 354
           ++C + +  S+ N+  S+I +
Sbjct: 406 KICKMEKCSSVFNVVNSSIGL 426




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11198.1 Clan IH, family I25, phytocystatin-like
peptidase inhibitor [Trichomonas vaginalis G3]
         (92 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAL38219  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   26   0.42 
AAL38220  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   26   0.42 
AAL38221  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   26   0.42 
AAL38222  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   26   0.42 
AAL38218  PfNBP1  (Adhesin)  [Plasmodium falciparum]                   26   0.42 
XP_818689   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   0.84 
XP_651378  Lgl4  (Adhesin)  [Entamoeba histolytica]                    25   1.1  
XP_845143  VSG  (Establishment)  [Trypanosoma brucei]                  25   1.1  
XP_654336  Lgl3  (Adhesin)  [Entamoeba histolytica]                    24   1.6  
XP_001352242  PfEMP1  (Establishment)  [Plasmodium falciparum]         22   8.9  
XP_001349219  PfEMP1  (Establishment)  [Plasmodium falciparum]         22   8.9  
XP_828103  VSG  (Establishment)  [Trypanosoma brucei]                  22   9.7  

>EAY11198.1 on AAL38219  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2969

 Score = 25.8 bits (55), Expect = 0.42,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 24/47 (51%), Gaps = 5/47 (10%)

Query: 35  NQKNGTNLEFVELITATQQVVSGFIFEGV-----VKTNDGDYKAKIW 76
           N+K      F+  I   + V++ ++++GV     +K ND  YK  ++
Sbjct: 98  NKKKNIKTNFLRPIEEEKTVLNNYVYKGVNFLDTIKRNDSSYKFDVY 144



>EAY11198.1 on AAL38220  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2957

 Score = 25.8 bits (55), Expect = 0.42,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 24/47 (51%), Gaps = 5/47 (10%)

Query: 35  NQKNGTNLEFVELITATQQVVSGFIFEGV-----VKTNDGDYKAKIW 76
           N+K      F+  I   + V++ ++++GV     +K ND  YK  ++
Sbjct: 98  NKKKNIKTNFLRPIEEEKTVLNNYVYKGVNFLDTIKRNDSSYKFDVY 144



>EAY11198.1 on AAL38221  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2965

 Score = 25.8 bits (55), Expect = 0.42,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 24/47 (51%), Gaps = 5/47 (10%)

Query: 35  NQKNGTNLEFVELITATQQVVSGFIFEGV-----VKTNDGDYKAKIW 76
           N+K      F+  I   + V++ ++++GV     +K ND  YK  ++
Sbjct: 98  NKKKNIKTNFLRPIEEEKTVLNNYVYKGVNFLDTIKRNDSSYKFDVY 144



>EAY11198.1 on AAL38222  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2976

 Score = 25.8 bits (55), Expect = 0.42,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 24/47 (51%), Gaps = 5/47 (10%)

Query: 35  NQKNGTNLEFVELITATQQVVSGFIFEGV-----VKTNDGDYKAKIW 76
           N+K      F+  I   + V++ ++++GV     +K ND  YK  ++
Sbjct: 98  NKKKNIKTNFLRPIEEEKTVLNNYVYKGVNFLDTIKRNDSSYKFDVY 144



>EAY11198.1 on AAL38218  PfNBP1  (Adhesin)  [Plasmodium falciparum]
          Length = 2977

 Score = 25.8 bits (55), Expect = 0.42,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 24/47 (51%), Gaps = 5/47 (10%)

Query: 35  NQKNGTNLEFVELITATQQVVSGFIFEGV-----VKTNDGDYKAKIW 76
           N+K      F+  I   + V++ ++++GV     +K ND  YK  ++
Sbjct: 98  NKKKNIKTNFLRPIEEEKTVLNNYVYKGVNFLDTIKRNDSSYKFDVY 144



>EAY11198.1 on XP_818689   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 844

 Score = 25.0 bits (53), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 10/17 (58%), Positives = 12/17 (70%)

Query: 54  VVSGFIFEGVVKTNDGD 70
            VS   F G+V+TNDGD
Sbjct: 91  TVSSLRFPGLVETNDGD 107



>EAY11198.1 on XP_651378  Lgl4  (Adhesin)  [Entamoeba histolytica]
          Length = 271

 Score = 24.6 bits (52), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 64  VKTNDGDYKAKIWCKPGNTEKELQSFE 90
           V+   G+Y+  I  +P   E ELQ FE
Sbjct: 114 VRFYQGNYEQNILLRPLKQENELQFFE 140



>EAY11198.1 on XP_845143  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 501

 Score = 24.6 bits (52), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 10/31 (32%), Positives = 17/31 (54%)

Query: 10  CGGVKPANVDDEHVIQAFKDAVALANQKNGT 40
           CG + P  + +  + QA ++ VAL    +GT
Sbjct: 280 CGKIPPRQLKENELRQAIEEIVALITTNSGT 310



>EAY11198.1 on XP_654336  Lgl3  (Adhesin)  [Entamoeba histolytica]
          Length = 294

 Score = 23.9 bits (50), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 64  VKTNDGDYKAKIWCKPGNTEKELQSFE 90
           V+  DG+Y+  +  +P     ELQ FE
Sbjct: 119 VRYPDGNYEQNVLLRPLKQGNELQFFE 145



>EAY11198.1 on XP_001352242  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2264

 Score = 21.9 bits (45), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 12/56 (21%)

Query: 17   NVDDEHVIQAFKDAVALANQKNGTNLEFVELITATQQVVSGFIFEGVVKTNDGDYK 72
            N DD+++ +  KD  + AN        F+E +   +   +G    G  K+ND D K
Sbjct: 1334 NADDKNIYEKLKDYTSAAN--------FLEALKHCKDGQTG----GEKKSNDQDNK 1377



>EAY11198.1 on XP_001349219  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2595

 Score = 21.9 bits (45), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 15/63 (23%)

Query: 4    CGGRCGCGGVKPANVDDEHVIQAFKDAVALANQKNGT-NLEFVELITATQQVVSGFIFEG 62
            CG  CG    KP NV+D  V              NGT N   + +ITA  ++   + FE 
Sbjct: 1466 CGEICGYNVCKPINVNDLKV--------------NGTQNQNQIIIITAFVKLWVEYFFED 1511

Query: 63   VVK 65
              K
Sbjct: 1512 YKK 1514



>EAY11198.1 on XP_828103  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 472

 Score = 21.9 bits (45), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 1/45 (2%)

Query: 29  DAVALANQKNGTNLEFVELITATQQVVSGFIFEGVVK-TNDGDYK 72
           DA+  A+ ++ T     +   AT+ V  G+ F+G  +   D D+K
Sbjct: 254 DAITTASAQHATMKAGHDAYLATKDVSEGYAFKGPTQLAGDDDFK 298




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11217.1 hypothetical protein TVAG_127240 [Trichomonas
vaginalis G3]
         (242 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001349033  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   0.83 

>EAY11217.1 on XP_001349033  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2064

 Score = 27.3 bits (59), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 6/40 (15%)

Query: 170  DISDNELFDFIEKLIQQNSKS------YASLLSFVHTESI 203
            D+SD ++  F ++L QQN         Y++   +VH E+I
Sbjct: 1112 DVSDQQVIAFFKELHQQNGGKKSVDTVYSTAAGYVHQEAI 1151




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11219.1 hypothetical protein TVAG_127260 [Trichomonas
vaginalis G3]
         (381 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001347692  PfEMP1  (Establishment)  [Plasmodium falciparum]         29   0.64 
AAM47175  Rh4  (Adhesin)  [Plasmodium falciparum]                      28   1.3  
XP_803400  VSG  (Establishment)  [Trypanosoma brucei]                  27   1.5  
AAM47174  Rh4  (Adhesin)  [Plasmodium falciparum]                      27   1.7  
AAM47192  Rh4  (Adhesin)  [Plasmodium falciparum]                      27   1.7  
XP_001609540  variant erythrocyte surface antigen-1, alpha subun...    26   3.6  
XP_001349737  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   4.0  
XP_001609101  variant erythrocyte surface antigen-1, alpha subun...    25   8.0  

>EAY11219.1 on XP_001347692  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2994

 Score = 28.9 bits (63), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)

Query: 188  KDLDYKTDFSEEAKRLEKIQEKIDQILALKQKNND-IRKKIEETN 231
            +D  + TD S+  K  E ++  ID+I    ++ ND IRK+  E N
Sbjct: 982  RDFLFGTDISKLNKHTEAVKTNIDRIFPPTERTNDTIRKEFWEKN 1026



>EAY11219.1 on AAM47175  Rh4  (Adhesin)  [Plasmodium falciparum]
          Length = 1711

 Score = 27.7 bits (60), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 4/88 (4%)

Query: 239 QKYNEESLAKRQTIQKHLEEIKMYNN-YNAQIDKLVGELHEATIDSISNSDDAFNAAKFK 297
           Q YN+E+  K + I    E+++ Y N +   I   + ++ E  ++ I+NSD     +K+K
Sbjct: 221 QNYNQENQEKSKMIDSENEKLEKYTNKFEHNIKPHIEDI-EKKVNYINNSDCHLTCSKYK 279

Query: 298 AYIDGAQEEI--SRVNIESERQNLVAEQ 323
             I+   +EI  +  NI   + NL  E+
Sbjct: 280 TIINNYIDEIITTNTNIYENKYNLPQER 307



>EAY11219.1 on XP_803400  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 483

 Score = 27.3 bits (59), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 16/104 (15%)

Query: 213 ILALKQKNNDIRKKIEET-----NKQKEDL-----------LQKYNEESLAKRQTIQKHL 256
           +LA  ++NN++ K++ +      N+Q+ DL            +K  EE+ A      + L
Sbjct: 55  LLAAVKRNNELNKRLAQATAAVRNQQRPDLGKAAMALLPILAKKAAEETSAALAMPTRAL 114

Query: 257 EEIKMYNNYNAQIDKLVGELHEATIDSISNSDDAFNAAKFKAYI 300
             +    NY+ Q   L   L     DS +   D  +AA   A I
Sbjct: 115 PGLVAAANYSGQQQALAALLTTEVADSTTGQSDVGSAASGTANI 158



>EAY11219.1 on AAM47174  Rh4  (Adhesin)  [Plasmodium falciparum]
          Length = 1711

 Score = 27.3 bits (59), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 3/88 (3%)

Query: 239 QKYNEESLAKRQTIQKHLEEIKMYNN-YNAQIDKLVGELHEATIDSISNSDDAFNAAKFK 297
           Q YN+E+  K + I    E+++ Y N +   I   + ++ +   + I+NSD     +K+K
Sbjct: 221 QNYNQENQEKSKMIDSENEKLEKYTNKFEHNIKPHIEDIEKKVNEYINNSDCHLTCSKYK 280

Query: 298 AYIDGAQEEI--SRVNIESERQNLVAEQ 323
             I+   +EI  +  NI   + NL  E+
Sbjct: 281 TIINNYIDEIITTNTNIYENKYNLPQER 308



>EAY11219.1 on AAM47192  Rh4  (Adhesin)  [Plasmodium falciparum]
          Length = 1716

 Score = 27.3 bits (59), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 3/88 (3%)

Query: 239 QKYNEESLAKRQTIQKHLEEIKMYNN-YNAQIDKLVGELHEATIDSISNSDDAFNAAKFK 297
           Q YN+E+  K + I    E+++ Y N +   I   + ++ +   + I+NSD     +K+K
Sbjct: 221 QNYNQENQEKSKMIDSENEKLEKYTNKFEHNIKPHIEDIEKKVNEYINNSDCHLTCSKYK 280

Query: 298 AYIDGAQEEI--SRVNIESERQNLVAEQ 323
             I+   +EI  +  NI   + NL  E+
Sbjct: 281 TIINNYIDEIITTNTNIYENKYNLPQER 308



>EAY11219.1 on XP_001609540  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1349

 Score = 26.2 bits (56), Expect = 3.6,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 4/52 (7%)

Query: 191 DYKTDFSEEAKRLEKIQEKIDQILALKQKNNDIRKKIEETNKQKEDLLQKYN 242
           D+K    E   RLEK+ E +++   LK    D+++K++      +D++ K N
Sbjct: 741 DFKGVLQEVLGRLEKLVEALEKAGGLK----DVKEKVKTALTAAKDVVGKQN 788



>EAY11219.1 on XP_001349737  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2199

 Score = 26.2 bits (56), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 11/18 (61%), Positives = 16/18 (88%)

Query: 198  EEAKRLEKIQEKIDQILA 215
            +E +++EKIQEKI+QIL 
Sbjct: 1133 DEKQKMEKIQEKIEQILP 1150



>EAY11219.1 on XP_001609101  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1359

 Score = 25.0 bits (53), Expect = 8.0,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 25/48 (52%)

Query: 201 KRLEKIQEKIDQILALKQKNNDIRKKIEETNKQKEDLLQKYNEESLAK 248
           K +E ++EK+  +  +K+     ++K+EE  K +E L     E   AK
Sbjct: 728 KLVEGVKEKVKALEEIKKTLEAAKEKLEEAKKTQEALEAAKGELEGAK 775




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11220.1 hypothetical protein TVAG_127270 [Trichomonas
vaginalis G3]
         (209 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001611900  variant erythrocyte surface antigen-1, alpha subun...    27   1.0  
XP_001351318  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   1.1  
XP_001350935  PfEMP1  (Establishment)  [Plasmodium falciparum]         26   2.3  
XP_820795   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   4.0  
XP_805509   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   4.3  
XP_811702   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   4.4  
XP_001350415  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   9.2  

>EAY11220.1 on XP_001611900  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1226

 Score = 26.9 bits (58), Expect = 1.0,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 170 LLNSLNGWISLMTQPDFNQ--RAMDEAVHELLEVLN 203
           +L  L+G +      DF+Q   A+  A+H++ EVLN
Sbjct: 763 ILGELDGKLGAANSNDFDQGKNALSSAIHKIREVLN 798



>EAY11220.1 on XP_001351318  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2169

 Score = 26.9 bits (58), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)

Query: 117  DYNKLQQQLQKESASGNNSKNIKEQAVITKLTKLLKIW 154
            DYNK++++L+  +  G  S  IKE  V T +T+  K W
Sbjct: 1482 DYNKIKKKLKSCTEKGEGSPCIKE-CVDTWITEKRKEW 1518



>EAY11220.1 on XP_001350935  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2268

 Score = 25.8 bits (55), Expect = 2.3,   Method: Composition-based stats.
 Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 1/92 (1%)

Query: 40  TEFDKELDNQALNLEQAIKDYREAIVELRSSKDSELNTTNTLTSKNVEFISELISVLNVS 99
           + F K +DNQ L L++  K Y+  I    S K  +        S +  + S+   +L   
Sbjct: 380 SPFVKWIDNQKLELDKQKKKYKSEITRGASGKSPKRTKRGARASDDNGYESKFYKILKEK 439

Query: 100 SMDEIPAEITRLIQLQADYNKLQQQLQKESAS 131
           +      E  RL+  +    K Q Q+  E AS
Sbjct: 440 NNYGTVGEFLRLLNNEKTC-KDQPQVGNEKAS 470



>EAY11220.1 on XP_820795   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 782

 Score = 25.0 bits (53), Expect = 4.0,   Method: Composition-based stats.
 Identities = 10/21 (47%), Positives = 15/21 (71%)

Query: 115 QADYNKLQQQLQKESASGNNS 135
           + D NKL+ Q+ +E  +GNNS
Sbjct: 144 ELDTNKLKTQVLEECPAGNNS 164



>EAY11220.1 on XP_805509   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 777

 Score = 25.0 bits (53), Expect = 4.3,   Method: Composition-based stats.
 Identities = 10/21 (47%), Positives = 15/21 (71%)

Query: 115 QADYNKLQQQLQKESASGNNS 135
           + D NKL+ Q+ +E  +GNNS
Sbjct: 140 ELDANKLKTQVLEECPAGNNS 160



>EAY11220.1 on XP_811702   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 776

 Score = 25.0 bits (53), Expect = 4.4,   Method: Composition-based stats.
 Identities = 10/21 (47%), Positives = 15/21 (71%)

Query: 115 QADYNKLQQQLQKESASGNNS 135
           + D NKL+ Q+ +E  +GNNS
Sbjct: 139 ELDTNKLKTQVLEECPAGNNS 159



>EAY11220.1 on XP_001350415  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 3056

 Score = 23.9 bits (50), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 8/59 (13%)

Query: 118  YNKLQQQLQKESASGNNSKNIKEQAVITKLTKLLK--------IWDIKNVGLNPESPLI 168
            YNK+ ++  KES  G +   I E  VI  L K               KN+G N  S  +
Sbjct: 1858 YNKIYRKSNKESEDGKDYSMIMEPTVIDYLNKRCNGEINGNYICCSCKNIGENSTSGTV 1916




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11224.1 Flavodoxin-like fold family protein
[Trichomonas vaginalis G3]
         (235 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_808611   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   2.4  
XP_001609163  variant erythrocyte surface antigen-1, alpha subun...    26   2.6  
XP_001609533  variant erythrocyte surface antigen-1, alpha subun...    26   2.9  
XP_001611206  variant erythrocyte surface antigen-1, alpha subun...    25   3.9  
XP_821294   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   5.0  
XP_001609751  variant erythrocyte surface antigen-1, alpha subun...    25   5.5  

>EAY11224.1 on XP_808611   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 848

 Score = 25.8 bits (55), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 14/77 (18%)

Query: 136 VTSIISTGSAPMFFDPKQGNGLDAYAWSA----------LYAFNYSGFTILRSIGIHGAN 185
           VTS I TG+   F     G      AW+           LY F    FT+L ++ IHG  
Sbjct: 536 VTSDIGTGNGVTFTGYADGATFRG-AWAEWPVGKQGENQLYHFANYNFTLLATVSIHG-- 592

Query: 186 SPKRIEQQPELQ-KKLN 201
            PK +   P +  KK+N
Sbjct: 593 EPKGVTPIPLMGVKKMN 609



>EAY11224.1 on XP_001609163  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1360

 Score = 25.8 bits (55), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 14/48 (29%), Positives = 19/48 (39%)

Query: 147 MFFDPKQGNGLDAYAWSALYAFNYSGFTILRSIGIHGANSPKRIEQQP 194
           M  +   GN LDA  W  +    Y GF        HG++      +QP
Sbjct: 350 MLNNHGPGNRLDAIIWDGIRGMLYLGFPHTSYNAAHGSDHDDNTFRQP 397



>EAY11224.1 on XP_001609533  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1162

 Score = 25.8 bits (55), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 14/37 (37%), Positives = 14/37 (37%)

Query: 147 MFFDPKQGNGLDAYAWSALYAFNYSGFTILRSIGIHG 183
           M  D   GN LDA  W       Y GF    S   HG
Sbjct: 314 MLNDAGPGNRLDAVIWDGFRGMLYLGFPDTGSGSGHG 350



>EAY11224.1 on XP_001611206  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1285

 Score = 25.4 bits (54), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 20/50 (40%), Gaps = 4/50 (8%)

Query: 147 MFFDPKQGNGLDAYAWSALYAFNYSGFTILRSIGIHGANSPKRIEQQPEL 196
           M  D   GN  DA  W  L    + GFT     G +  N+ K    QP L
Sbjct: 324 MLNDSGPGNRWDAIIWDGLLGKLFLGFTHPSGSGANDGNTAK----QPTL 369



>EAY11224.1 on XP_821294   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 776

 Score = 25.0 bits (53), Expect = 5.0,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 11/62 (17%)

Query: 165 LYAFNYSGFTILRSIGIHGANSPKRIEQQPELQKKLNQQ----LLNLD-----NWKVITD 215
           LY F    FT++ ++ IHG   PK     P +   +N      LL L       W+V+  
Sbjct: 568 LYHFANHNFTLVATVSIHG--EPKGDTPNPSMGATMNDNKNTVLLGLSYDKEGKWRVLCG 625

Query: 216 KK 217
            K
Sbjct: 626 GK 627



>EAY11224.1 on XP_001609751  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1298

 Score = 25.0 bits (53), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 14/48 (29%), Positives = 18/48 (37%)

Query: 147 MFFDPKQGNGLDAYAWSALYAFNYSGFTILRSIGIHGANSPKRIEQQP 194
           M  +   GN LDA  W  +    Y GF        HG +      +QP
Sbjct: 317 MLNNHGPGNRLDAVIWDGIRGMLYLGFPHTTDNAAHGKDYNDNTFRQP 364




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11229.1 hypothetical protein TVAG_127360 [Trichomonas
vaginalis G3]
         (73 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_829784  VSG  (Establishment)  [Trypanosoma brucei]                  22   4.5  
AAV85504  AP120  (Adhesin)  [Trichomonas vaginalis]                    22   6.6  

>EAY11229.1 on XP_829784  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 474

 Score = 21.9 bits (45), Expect = 4.5,   Method: Composition-based stats.
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 42  DKSSWDGKSTNSSGTTSYATGMTKESNSKVG 72
           DK+  D   + + GT + A G    SNS+ G
Sbjct: 179 DKAGEDKAGSKTYGTAATACGGNDPSNSEAG 209



>EAY11229.1 on AAV85504  AP120  (Adhesin)  [Trichomonas vaginalis]
          Length = 255

 Score = 21.6 bits (44), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 2/24 (8%)

Query: 25  KGEVMRLYEQYILNAW-EDKSSWD 47
           KGE+  L+EQ +L  W +DK S D
Sbjct: 132 KGELKELFEQ-LLKVWDQDKESGD 154




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11232.1 CK1 family protein kinase [Trichomonas
vaginalis G3]
         (345 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    33   0.020
Q03077  Lgl2  (Adhesin)  [Entamoeba histolytica]                       25   6.0  
XP_656145  Lgl1  (Adhesin)  [Entamoeba histolytica]                    25   6.2  

>EAY11232.1 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 33.1 bits (74), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%)

Query: 123 MVRCIKDFHVHGFIHRDIKPGNFLLNPGSNNPLVLIDYGLSREFIDPS 170
           +++ +   H  G +HRDIKP N +++      L LID+GL+ EF  P 
Sbjct: 156 LLKAMNYCHSQGIMHRDIKPHNVMID-HEKKILRLIDWGLA-EFYHPE 201



>EAY11232.1 on Q03077  Lgl2  (Adhesin)  [Entamoeba histolytica]
          Length = 288

 Score = 25.0 bits (53), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 19/93 (20%), Positives = 31/93 (33%), Gaps = 10/93 (10%)

Query: 174 PYPERAHCGFRGTSKYASISAHENKDLSWKDDL----------ISWMYSMIELIDGRLPW 223
           PYP   +  +  T+KY        K L W              +   Y   +  DGR  W
Sbjct: 195 PYPTEWYPEYNSTTKYTQNGKTVIKTLKWPTYKRHFYLPYRLDVDLCYQARKATDGRSTW 254

Query: 224 LSGRDFERTHRMKLTIPARTLFSSLPGEFIDIW 256
              ++   T +    I +R   +     FI ++
Sbjct: 255 TGNKNLNTTSKSYQIIASRCSATEARQIFIPVF 287



>EAY11232.1 on XP_656145  Lgl1  (Adhesin)  [Entamoeba histolytica]
          Length = 288

 Score = 25.0 bits (53), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 19/93 (20%), Positives = 31/93 (33%), Gaps = 10/93 (10%)

Query: 174 PYPERAHCGFRGTSKYASISAHENKDLSWKDDL----------ISWMYSMIELIDGRLPW 223
           PYP   +  +  T+KY        K L W              +   Y   +  DGR  W
Sbjct: 195 PYPTEWYPEYNSTTKYTQNGKTVIKTLKWPTYKRHFYLPYRLDVDLCYQARKATDGRSTW 254

Query: 224 LSGRDFERTHRMKLTIPARTLFSSLPGEFIDIW 256
              ++   T +    I +R   +     FI ++
Sbjct: 255 TGNKNLNTTSKSYQIIASRCSATEARQIFIPVF 287




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11247.1 B-box zinc finger family protein [Trichomonas
vaginalis G3]
         (663 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_812792   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   1.5  
XP_809902   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           27   5.6  
XP_001349437  PfEMP1  (Establishment)  [Plasmodium falciparum]         27   6.1  

>EAY11247.1 on XP_812792   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 879

 Score = 28.5 bits (62), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 44/112 (39%), Gaps = 16/112 (14%)

Query: 66  ISQDVSNVSRYGIRVSPKDGFAFTLNDIK----INKSGENVLYHAQIALGAVYNYQDMKA 121
           ++  V+N +       P +G  FT         + K GEN LYH      A YN+     
Sbjct: 534 VNATVNNKAGAAAATGPSNGVTFTGRGAGAEWPVGKQGENQLYHF-----ANYNFT---- 584

Query: 122 PLDSIQYISTPPTSENLP-SGYDSLRIGNNKFVVFHQNQVKNLHLVKFTWDP 172
            L +   I   P S N+P  G  +   G +K +    N  K   +++   DP
Sbjct: 585 -LVATVSIDGEPIS-NIPVVGVRAGSKGGSKLIELSYNSGKKWQVLRGDGDP 634



>EAY11247.1 on XP_809902   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 955

 Score = 26.6 bits (57), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 9/46 (19%)

Query: 70  VSNVSRYGIRVSPKDGFAFTLNDIKINKSGENVLYHAQIALGAVYN 115
           V+ VS +G+   P++G    L  +K+N SG+ VL      LG  YN
Sbjct: 597 VATVSIHGV---PQEGSPIPLMGVKMNDSGKTVL------LGLSYN 633



>EAY11247.1 on XP_001349437  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2231

 Score = 26.6 bits (57), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 5/78 (6%)

Query: 580  KDAYIPYGGQKEDTFYTVSTENYISFGGEDLKISGKSLEECSSAIENSFGVGLKYGSKAA 639
            K+  IP+G  ++  FYT+     I  G      +GK +EE  S I++ F  G K   K  
Sbjct: 1054 KEGTIPHGFLRQ-MFYTLGDYRDILVG--KYVDNGKDMEEVKSNIDSFFSNGEKPDDKKG 1110

Query: 640  KEFLAGKHQFKPDAIEIW 657
             E    K  +K +A  IW
Sbjct: 1111 VE--QRKEWWKENAKHIW 1126




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11254.1 hypothetical protein TVAG_061580 [Trichomonas
vaginalis G3]
         (1175 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_654336  Lgl3  (Adhesin)  [Entamoeba histolytica]                    30   1.0  
XP_818893   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           28   5.1  

>EAY11254.1 on XP_654336  Lgl3  (Adhesin)  [Entamoeba histolytica]
          Length = 294

 Score = 29.6 bits (65), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 10/69 (14%)

Query: 717 KYPTGKLEMIKRLLPLLIQIAEKNKYDEKFFQYT--KFFGAYVIPFVNEAHNLMAGGVKG 774
           +YP G  E    L PL      K   + +FF++   + +  Y IP     H++ AG V+G
Sbjct: 120 RYPDGNYEQNVLLRPL------KQGNELQFFEFAPYRMYTCYAIP--KRVHDIRAGAVEG 171

Query: 775 KETKIAEKL 783
               I +K+
Sbjct: 172 HTLIIYQKI 180



>EAY11254.1 on XP_818893   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 956

 Score = 27.7 bits (60), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 12/77 (15%)

Query: 1110 NDDDGEMPNFYEGDSGHSAKSTNNRR----TSRRV----KKLDSQANISLNSNELNV--- 1158
            N D  E+ +FY G  G SA ST N      T   V    + L S+   +LN+N+L++   
Sbjct: 684  NTDSKEISHFYIGGDGKSAVSTGNGEDVSVTVTNVLLYNRPLTSEEITALNTNQLSIPKL 743

Query: 1159 -DISNLSGNVKPPSDDE 1174
             D+   + +  PP+  E
Sbjct: 744  EDLKTEARDAPPPAGTE 760




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11265.1 hypothetical protein TVAG_061690 [Trichomonas
vaginalis G3]
         (120 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_803379  VSG  (Establishment)  [Trypanosoma brucei]                  24   2.2  
XP_812593   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   3.1  
XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]                 23   9.1  

>EAY11265.1 on XP_803379  VSG  (Establishment)  [Trypanosoma brucei]
          Length = 532

 Score = 24.3 bits (51), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 7/48 (14%)

Query: 49 DAALGLPPW-------YANMRWKEFYTNPEVGYKQLYADDANTGVDPE 89
          DA L +PP        Y  +R   F T+     K  Y+DDA T   PE
Sbjct: 46 DADLDIPPQESVDEASYNKIRNLNFSTSTTDWRKTFYSDDALTKPHPE 93



>EAY11265.1 on XP_812593   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 868

 Score = 23.9 bits (50), Expect = 3.1,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 14/24 (58%)

Query: 14  QPNPENIPNEVRIQTAMANYGQVP 37
           Q + EN+  E+R+ TA  N   VP
Sbjct: 788 QSSAENVMEELRLHTAAKNDSSVP 811



>EAY11265.1 on XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]
          Length = 2112

 Score = 22.7 bits (47), Expect = 9.1,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 26/74 (35%), Gaps = 13/74 (17%)

Query: 8   NAQQPGQPNPENIPNEVRIQTAMANYGQVPTDVQMQTAMSNDAALGLPPWYANMRWKEFY 67
           N +   +PNPE  PN V   T   N    P  V+  T   N   +  P         E  
Sbjct: 505 NPEPVEKPNPEENPNPVEKPTPEEN----PNPVEKPTPEENPNPVEKP---------EPE 551

Query: 68  TNPEVGYKQLYADD 81
            NP +  +  Y  D
Sbjct: 552 KNPCINMEDCYCKD 565




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11268.1 hypothetical protein TVAG_061720 [Trichomonas
vaginalis G3]
         (50 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_811148   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   0.22 
XP_816764   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   0.83 
XP_803204   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           23   0.96 

>EAY11268.1 on XP_811148   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 564

 Score = 24.6 bits (52), Expect = 0.22,   Method: Composition-based stats.
 Identities = 14/30 (46%), Positives = 16/30 (53%)

Query: 11  SRWICRLPAVTQRVCQVLPIPQEVLHRLKK 40
           S W  RL A  QRV  VL   +EV  R+ K
Sbjct: 455 SLWSVRLTAQLQRVKDVLETWKEVDERVSK 484



>EAY11268.1 on XP_816764   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 868

 Score = 23.1 bits (48), Expect = 0.83,   Method: Composition-based stats.
 Identities = 13/30 (43%), Positives = 16/30 (53%)

Query: 11  SRWICRLPAVTQRVCQVLPIPQEVLHRLKK 40
           S W  RL A  QRV  VL   ++V  R+ K
Sbjct: 452 SLWSVRLTAQLQRVKDVLATWKKVDERVSK 481



>EAY11268.1 on XP_803204   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 700

 Score = 23.1 bits (48), Expect = 0.96,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 19/40 (47%)

Query: 11  SRWICRLPAVTQRVCQVLPIPQEVLHRLKKQQQPVENKPN 50
           S W  RL A  +RV +VL   +EV   + K   P   K +
Sbjct: 456 SLWSVRLTAQLERVKEVLETWKEVDEHVSKLCSPESAKED 495




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11272.1 selective LIM binding factor, putative
[Trichomonas vaginalis G3]
         (1673 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAK97081  gGSP  (Others)  [Giardia duodenalis]                         30   1.2  
AAX07970  alpha-4 giardin  (Others)  [Giardia duodenalis]              28   3.7  
Q4VPQ3  Giardin subunit alpha-4  (Others)  [Giardia duodenalis]        28   3.7  

>EAY11272.1 on AAK97081  gGSP  (Others)  [Giardia duodenalis]
          Length = 255

 Score = 29.6 bits (65), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 38/94 (40%), Gaps = 22/94 (23%)

Query: 58  GREEDA-KKNFTVTSFDWSPDSSRFA-------------IGQSD--------STVAVYDI 95
            RE DA  K  T+ SF +S D   F+             +  SD        +T+ +Y  
Sbjct: 54  AREGDAFTKLMTILSFTFSADICDFSSVIYDELIASFTLVEVSDGCKSTEKTATIDMYMT 113

Query: 96  GPANAVDYRKKVAMRVATKGAPLCVAWPNSSLNE 129
           G  N  D  K +   V  +   LC+ +PN SL E
Sbjct: 114 GVFNLADIFKALGDDVLKQAPDLCLLYPNPSLAE 147



>EAY11272.1 on AAX07970  alpha-4 giardin  (Others)  [Giardia duodenalis]
          Length = 255

 Score = 28.1 bits (61), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 5/49 (10%)

Query: 1394 VDKQDFDKAIAVLAKYSPSANSKSIPAYITLCQATVYGVPTYENLPQTF 1442
            +D  D DK   + A Y      K IPAY        YG+P  E + + F
Sbjct: 16   IDAGDEDKITKITASYGSEQRDKIIPAY-----HANYGIPPSEAIRKAF 59



>EAY11272.1 on Q4VPQ3  Giardin subunit alpha-4  (Others)  [Giardia duodenalis]
          Length = 255

 Score = 28.1 bits (61), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 5/49 (10%)

Query: 1394 VDKQDFDKAIAVLAKYSPSANSKSIPAYITLCQATVYGVPTYENLPQTF 1442
            +D  D DK   + A Y      K IPAY        YG+P  E + + F
Sbjct: 16   IDAGDEDKITKITASYGSEQRDKIIPAY-----HANYGIPPSEAIRKAF 59




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11273.1 viral A-type inclusion protein, putative
[Trichomonas vaginalis G3]
         (951 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609167  variant erythrocyte surface antigen-1, alpha subun...    31   0.37 
XP_001609540  variant erythrocyte surface antigen-1, alpha subun...    27   5.1  
XP_001608665  variant erythrocyte surface antigen-1, alpha subun...    27   8.5  
CAD21778  ESAG-7  (Establishment)  [Trypanosoma brucei]                26   8.6  
CAD21779  ESAG-7  (Establishment)  [Trypanosoma brucei]                26   8.6  
CAD21872  ESAG-6  (Establishment)  [Trypanosoma brucei]                26   8.9  
CAD21456  ESAG-7  (Establishment)  [Trypanosoma brucei]                26   9.1  
CAD21780  ESAG-6  (Establishment)  [Trypanosoma brucei]                26   9.3  

>EAY11273.1 on XP_001609167  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1317

 Score = 31.2 bits (69), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 71/148 (47%), Gaps = 23/148 (15%)

Query: 88  LQSDQKAYIDANRTNLAKFETKITSDAQDILKAIEEINNQFINCQ--------EDVSKMA 139
           ++ D+K  ++  +  L     ++    +++L+ I E+  Q  N Q        E+++K+ 
Sbjct: 639 MEHDRKGRVENMKKGLVGVNGEVALKVKEVLQKIGEVVVQLGNAQEALEGRKGEEITKVK 698

Query: 140 DQYPQQLNQILQTENEKFKAEVEELNK--------ESKRRLDELKETNKKNLQELEEQHQ 191
           D+      ++++ + E  +AEV+++NK         +K +L+EL    + N  +L E  Q
Sbjct: 699 DKLEGAKGELVKAQKE-LEAEVQKVNKGGLNGKLGAAKNKLEELTRNGRSN-GKLGEVVQ 756

Query: 192 KDILELKNSNDPS-NKKTNAINKKFSAL 218
           K    L    DP  NK + AINK +  L
Sbjct: 757 K----LGGDADPGKNKISEAINKVYEVL 780



>EAY11273.1 on XP_001609540  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1349

 Score = 27.3 bits (59), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 5/68 (7%)

Query: 687 KLKELEDTTEIDNLNNMIKDLKEELEKLNNEANLSVEMRAEEHKKRLANEKDKFEKLKQD 746
           KLK LE   E     N +K+L+E +EKL +      E+  +     L N +++ ++   D
Sbjct: 667 KLKALEGEAESTGGINGVKELREGIEKLRDILEAIGEVVVQ-----LGNAQERLDRGNAD 721

Query: 747 LDDQMSKL 754
           L   M+ L
Sbjct: 722 LGGVMNAL 729



>EAY11273.1 on XP_001608665  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1326

 Score = 26.6 bits (57), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 53/148 (35%), Gaps = 37/148 (25%)

Query: 683 ELEEKLKELEDTTEIDNLNNMIKDLKEELEKLNNEANLSVEMRAEEHKKRLANEKDKFEK 742
           EL E   +LED  + D L   + +  ++LE L N                   +K     
Sbjct: 733 ELTEAKTKLEDAVKKDGLTGKLAEATKKLEALTNNG---------------GGDKGALHI 777

Query: 743 LKQDLDDQMSKLYHKHNEDKEQLQKDLEESASRESAALDNAKDLSEKMKLAEKREFERTR 802
           L   +D     L+      KE   KD      R SAA+   +++ E +K   K E E+ +
Sbjct: 778 L---VDSGPGSLHQVATASKE-YDKDYSSGKDRISAAISGVREVLELIKGWAKGEIEKQK 833

Query: 803 D------------------QLKHDIEDL 812
                              +L +DIEDL
Sbjct: 834 TAKENMKVVLRLEIPQEYTKLLNDIEDL 861



>EAY11273.1 on CAD21778  ESAG-7  (Establishment)  [Trypanosoma brucei]
          Length = 340

 Score = 26.2 bits (56), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 4/38 (10%)

Query: 244 STYLKGIKDKVRAQSSELSMFEKEKKAKNDMRREQIKL 281
           STYLKGI  +V ++S+ ++    EK +   MR  Q++L
Sbjct: 39  STYLKGIAHRVNSESAVVT----EKLSDLKMRSIQLQL 72



>EAY11273.1 on CAD21779  ESAG-7  (Establishment)  [Trypanosoma brucei]
          Length = 340

 Score = 26.2 bits (56), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 4/38 (10%)

Query: 244 STYLKGIKDKVRAQSSELSMFEKEKKAKNDMRREQIKL 281
           STYLKGI  +V ++S+ ++    EK +   MR  Q++L
Sbjct: 39  STYLKGIAHRVNSESAVVT----EKLSDLKMRSIQLQL 72



>EAY11273.1 on CAD21872  ESAG-6  (Establishment)  [Trypanosoma brucei]
          Length = 400

 Score = 26.2 bits (56), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 4/38 (10%)

Query: 244 STYLKGIKDKVRAQSSELSMFEKEKKAKNDMRREQIKL 281
           STYLKGI  +V ++S+ ++    EK +   MR  Q++L
Sbjct: 38  STYLKGIAHRVNSESAVVT----EKLSDLKMRSIQLQL 71



>EAY11273.1 on CAD21456  ESAG-7  (Establishment)  [Trypanosoma brucei]
          Length = 338

 Score = 26.2 bits (56), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 4/38 (10%)

Query: 244 STYLKGIKDKVRAQSSELSMFEKEKKAKNDMRREQIKL 281
           STYLKGI  +V ++S+ ++    EK +   MR  Q++L
Sbjct: 37  STYLKGIAHRVNSESAVVT----EKLSDLKMRSIQLQL 70



>EAY11273.1 on CAD21780  ESAG-6  (Establishment)  [Trypanosoma brucei]
          Length = 401

 Score = 26.2 bits (56), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 8/52 (15%)

Query: 230 ANLKNNINDLQKQNSTYLKGIKDKVRAQSSELSMFEKEKKAKNDMRREQIKL 281
           A   N +  L    STYLKGI  +V ++S+ ++    EK +   MR  Q++L
Sbjct: 29  ATAANKVCGL----STYLKGIAHRVNSESAVVT----EKLSDLKMRSIQLQL 72




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11276.1 hypothetical protein TVAG_061800 [Trichomonas
vaginalis G3]
         (97 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351517  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   1.7  
XP_966307  PfEMP1  (Establishment)  [Plasmodium falciparum]            23   3.8  

>EAY11276.1 on XP_001351517  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2193

 Score = 24.3 bits (51), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 7/44 (15%)

Query: 1  MDSIDKKVHEKLDEE------ELEDTVENAKPLFEQ-EVRKMCE 37
          +DSI KKVH+K+  E      +L+  +++AK + E+    K C+
Sbjct: 23 LDSIGKKVHDKVKSEANQYKDDLKGNLQHAKDMGERASSNKTCD 66



>EAY11276.1 on XP_966307  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2238

 Score = 23.1 bits (48), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 15/61 (24%), Positives = 24/61 (39%), Gaps = 11/61 (18%)

Query: 1  MDSIDKKVHEKLDEEELEDTVENAKPLFE-----------QEVRKMCEKQLEHEREIYYG 49
          +DSI KKVH+K     L+ +  + +               Q     C+ Q E+   +  G
Sbjct: 21 LDSIGKKVHDKAKNAALDRSNSDLQGFLSEAKFEKNESDPQTPGDPCQLQYEYHTNVTLG 80

Query: 50 Y 50
          Y
Sbjct: 81 Y 81




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11279.1 hypothetical protein TVAG_061830 [Trichomonas
vaginalis G3]
         (275 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_807798   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   2.2  

>EAY11279.1 on XP_807798   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 875

 Score = 26.2 bits (56), Expect = 2.2,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 17/91 (18%)

Query: 74  TKQEMNVINTAERRQDVEIEMHN--DVSRVNLAKQINAQSKIEFETLLQ----------- 120
           T +E++ +  AE+ Q V + + N  DVS     +++    + E +T              
Sbjct: 632 TNEELSSVLGAEKTQHVVLLIRNGSDVSAYVDGQRVGGNEQCELKTKASKVISHFYIGGD 691

Query: 121 ----RQQEEANLKKKQAMLFKDPEGEELITA 147
               R+QE+ ++  K  +L+  P   E ITA
Sbjct: 692 GDKTREQEDVSVTVKNVLLYNRPLSSEEITA 722




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11281.1 hypothetical protein TVAG_061850 [Trichomonas
vaginalis G3]
         (215 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_814186   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           24   9.3  

>EAY11281.1 on XP_814186   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 883

 Score = 23.9 bits (50), Expect = 9.3,   Method: Composition-based stats.
 Identities = 12/31 (38%), Positives = 18/31 (58%)

Query: 59  EVSPLQSFDVLYTIKSIKVSDLNRNFKDIDG 89
           E SPL  F VL T +  +V  +   +K++DG
Sbjct: 438 EPSPLGMFSVLLTEQLQRVKKVLATWKEVDG 468




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11289.1 glucose-6-phosphate isomerase family protein
[Trichomonas vaginalis G3]
         (542 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001609540  variant erythrocyte surface antigen-1, alpha subun...    27   3.6  

>EAY11289.1 on XP_001609540  variant erythrocyte surface antigen-1, alpha subunit 
            (Establishment)  [Babesia bovis]
          Length = 1349

 Score = 26.9 bits (58), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 3/75 (4%)

Query: 447 DQPGVQDGKKAATGVNATSKKIVAGLEKIEGKLSGYTEDILKALGFEDVPYEAEDVLN-- 504
           D  GV +  K   GVN  +      L+++ G+L    E + KA G +DV  + +  L   
Sbjct: 721 DLGGVMNALKKVEGVNNGTNDFKGVLQEVLGRLEKLVEALEKAGGLKDVKEKVKTALTAA 780

Query: 505 -DIVKNINVEESYPT 518
            D+V   N  +  P 
Sbjct: 781 KDVVGKQNGTDVDPC 795




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11290.1 LOC402794 protein, putative [Trichomonas
vaginalis G3]
         (241 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAK07771  MSA-1  (Invasion)  [Babesia bovis]                           25   2.8  
AAK07772  MSA-1  (Invasion)  [Babesia bovis]                           25   3.1  
XP_806381   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           25   4.9  
XP_652967  Vps35  (Establishment)  [Entamoeba histolytica]             24   8.8  
XP_001349512  PfEMP1  (Establishment)  [Plasmodium falciparum]         24   9.1  

>EAY11290.1 on AAK07771  MSA-1  (Invasion)  [Babesia bovis]
          Length = 334

 Score = 25.4 bits (54), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 12/32 (37%), Positives = 17/32 (53%)

Query: 35  FYTAKKLSHATMGLPPEKLRQPPSQYLKKGER 66
           F TAKKL+     + P+ L  PP + +   ER
Sbjct: 212 FVTAKKLARVNTFVTPDSLTVPPEELVASIER 243



>EAY11290.1 on AAK07772  MSA-1  (Invasion)  [Babesia bovis]
          Length = 339

 Score = 25.4 bits (54), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 12/32 (37%), Positives = 17/32 (53%)

Query: 35  FYTAKKLSHATMGLPPEKLRQPPSQYLKKGER 66
           F TAKKL+     + P+ L  PP + +   ER
Sbjct: 212 FVTAKKLARVNTFVTPDSLTVPPEELVASIER 243



>EAY11290.1 on XP_806381   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1045

 Score = 25.0 bits (53), Expect = 4.9,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 24/64 (37%), Gaps = 12/64 (18%)

Query: 4   EEECIYNLIPKPP------------PVIVKEPLHKSKFQDQKQFYTAKKLSHATMGLPPE 51
           EEE ++ L+P  P            P I  E    S+  D  Q    K    ATM    E
Sbjct: 757 EEESVHILVPAAPSSTVAGGSSVPEPAIAAESAENSRSDDNAQLSEDKTSPQATMNEDSE 816

Query: 52  KLRQ 55
            +++
Sbjct: 817 SMQR 820



>EAY11290.1 on XP_652967  Vps35  (Establishment)  [Entamoeba histolytica]
          Length = 757

 Score = 24.3 bits (51), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 5/65 (7%)

Query: 157 DNVRESMVPEDTETRCRLL----SEEERIEILNGLYAN-LAENKKRYASLSFGQDNLSFR 211
           D+++E  +  D E  CRLL     + E  E +  L+ + +  +  R   L+     ++ R
Sbjct: 473 DDIKEEEIGVDVENACRLLPLIGGDAEMFESILTLFKDKMTGDAIRIKYLAAPLIFVALR 532

Query: 212 RKKEE 216
           R+KEE
Sbjct: 533 RRKEE 537



>EAY11290.1 on XP_001349512  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2980

 Score = 24.3 bits (51), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)

Query: 44   ATMGLPPEKLRQPPSQYLKKGERTKKLPPKE 74
            +T G+P   L  PP +   K + TK LPP+E
Sbjct: 1565 STDGMPAS-LEYPPKEINGKCDCTKALPPQE 1594




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11298.1 hypothetical protein TVAG_062020 [Trichomonas
vaginalis G3]
         (426 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11300.1 hypothetical protein TVAG_343940 [Trichomonas
vaginalis G3]
         (2764 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001349036  PfEMP1  (Establishment)  [Plasmodium falciparum]         33   0.20 
XP_001349437  PfEMP1  (Establishment)  [Plasmodium falciparum]         29   5.3  

>EAY11300.1 on XP_001349036  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2192

 Score = 33.5 bits (75), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 5/88 (5%)

Query: 1949 SQDINYNKPVNVNKQKQTKPINNNIYNSSSTKDKSDTTTSTSVSSSISNVVEKDKKDPLK 2008
             ++I+YN  ++ N    TK ++NN+Y   S  D  + T S +    I + V K K++ L 
Sbjct: 1972 GEEISYNINMSTNSMDDTKYVSNNVY---SGIDLINDTLSGNAHIDIYDEVLKRKENELF 2028

Query: 2009 YTNALTKVSTDISTTSTSTSSSPIRNNL 2036
             TN + + S  I + +  T+S PI N L
Sbjct: 2029 GTNHVKQTS--IHSVAKLTNSDPIHNQL 2054



>EAY11300.1 on XP_001349437  PfEMP1  (Establishment)  [Plasmodium falciparum]
          Length = 2231

 Score = 28.9 bits (63), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 6/84 (7%)

Query: 1954 YNKPVN-VNKQKQTKPINNNIYNSSSTKDKSDTTTSTSVSSSISNVVEKDKKDPLKYTNA 2012
            YN  VN VN    TK ++NN+Y   S  D  + T S +    I + V K K++ L  TN 
Sbjct: 1982 YNYNVNMVNSMDDTKYVSNNVY---SGIDLINDTLSGNKHIDIYDEVLKRKENELFGTNH 2038

Query: 2013 LTKVSTDISTTSTSTSSSPIRNNL 2036
            + + S  I + +  T+S PI   L
Sbjct: 2039 VKQTS--IHSVAKLTNSDPIHKQL 2060




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11302.1 Eukaryotic initiation factor 4E family
protein [Trichomonas vaginalis G3]
         (189 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_818002   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   2.1  

>EAY11302.1 on XP_818002   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 728

 Score = 25.8 bits (55), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)

Query: 99  LLLDFISESINEDVIGAVVSVRNDNERILVWNKTSSDPTIRLAIANQLAKCLNLPFKSRI 158
           LL   + +S +  +IG   S+    E +    KT+S+ T  L   +Q+A  L    K  +
Sbjct: 575 LLAVCLGDSKSTKIIGLSYSMNKTWETVFDRKKTTSNTTWELGKEHQVALMLQDGNKGSV 634

Query: 159 EYLAHQRIGNSKPI 172
            Y+  Q +G+S+ I
Sbjct: 635 -YVDGQLVGSSENI 647




BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= EAY11314.1 Adaptin N terminal region family protein
[Trichomonas vaginalis G3]
         (739 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAX07981  alpha-11 giardin  (Others)  [Giardia duodenalis]             28   1.0  
XP_628559  gp900  (Adhesin)  [Cryptosporidium parvum]                  28   2.2  
XP_808156   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]           26   9.9  

>EAY11314.1 on AAX07981  alpha-11 giardin  (Others)  [Giardia duodenalis]
          Length = 255

 Score = 28.5 bits (62), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 4/62 (6%)

Query: 396 RIDIISKVYQAAMKFKA-NDRWFISTTLDLLKESGGY---VGTDLLSSFCEFVGTTSERS 451
           R+++I K  +    F+A +D   I+T  + LK +  Y    G DLL  F + +  TS  S
Sbjct: 77  RVNVIKKAMKNVNDFRAIHDVVLIATPDERLKLAQAYKEKTGNDLLQDFVDQIPLTSAAS 136

Query: 452 YV 453
           Y+
Sbjct: 137 YL 138



>EAY11314.1 on XP_628559  gp900  (Adhesin)  [Cryptosporidium parvum]
          Length = 1937

 Score = 28.1 bits (61), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 6/95 (6%)

Query: 145  GSPAFVLKRAGMAAVRIVRKNPELCETFKNSVQSLLNNSSHGIVISGLNLVIEMLT---- 200
            G P   L    +  V ++  NPE  E F      ++N +  GIV SG++    +L+    
Sbjct: 1023 GLPIDTLTGYPLDPVSLIPFNPETGELFDPISDEIMNGTIAGIV-SGISASESLLSQKSA 1081

Query: 201  -INPKLSRAWAQFASPLTKILQNLITGRLRPEYAT 234
             I+P  +    +F   L      +I G L P   T
Sbjct: 1082 PIDPATNMVVGEFGGLLNPATGVMIPGSLGPSEQT 1116



>EAY11314.1 on XP_808156   Trans-sialidase  (Invasion)  [Trypanosoma cruzi]
          Length = 1058

 Score = 25.8 bits (55), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 6/65 (9%)

Query: 3   SLNDFISSLRMASSIEQEKYLTSTEQAHIRASLKVCEASQRPVIVSKLMFLDLLGHNVQW 62
            +N   +SLR+ S +E + +L +  +AH +   K C A     I SK      LG NV  
Sbjct: 92  GINTESASLRVPSLVEVQGHLFAIAEAHCKDGDK-CSAVGFTGIASK-----YLGLNVDA 145

Query: 63  GNTEV 67
           G TE+
Sbjct: 146 GPTEI 150



  Database: protseq.fasta
    Posted date:  Dec 26, 2008  2:04 PM
  Number of letters in database: 1,065,101
  Number of sequences in database:  1775
  
Lambda     K      H
   0.318    0.132    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1775
Number of Hits to DB: 1,025,985,003
Number of extensions: 52685619
Number of successful extensions: 474634
Number of sequences better than 10.0: 18917
Number of HSP's gapped: 290423
Number of HSP's successfully gapped: 84146
Length of database: 1,065,101
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 49 (23.5 bits)