PSSM and SSC to SVM converter

Upload Positive dataset (fasta format)
Generate SVM score using
Project name

(All feilds are mandatory)

Click here if you already have PSSM based SVM model file

PSSM = Position specific scoring matrix
SSC = Secondary structure composition

This online tool converts protein sequence (Unaligned FASTA format) in PSSM and / or SSC matrix and
generate a input file for generating model file through SVM_learn.
How to use :
Upload Postive dataset and then negetive dataset (next step), this will generate input file for SVM_learn.
Upload your model file in third step (or click on linear kernel, if you want to use linear kernel)