BBOV_I001480 | proteasome alpha 5 subunit, putative

_IDPredictionOTHERSPmTPCS_Position
BBOV_I001480OTHER0.9995360.0001880.000275
No Results

  • Fasta :-

    >BBOV_I001480 MFTARNEYDRGVNTFSPEGRIFQVEYALGAIKLGSTALAIATKEGVIFASEHRVNSPLME SVSLEKIMEIDTHIGCTMSGLIADARTLIDHGRLECANHRFVYNEPLAIRSCVESIADMA LDFSDIFDTRKKKTMSRPFGVALLVGGIDIDGPSIWCVDPSGTSIKYKASAIGSAQEGAE SVLQERYRDDMSFRDAELLVLEVLRQVMKDQMTTKNIEMARIKIHDRQFREYTEDEIGEI IQDLPQMENM
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_I001480.fa Sequence name : BBOV_I001480 Sequence length : 250 VALUES OF COMPUTED PARAMETERS Coef20 : 3.693 CoefTot : 0.142 ChDiff : -12 ZoneTo : 6 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.065 1.359 0.124 0.616 MesoH : -0.471 0.446 -0.339 0.238 MuHd_075 : 23.510 9.622 4.424 5.478 MuHd_095 : 27.803 17.327 8.084 5.956 MuHd_100 : 21.952 17.124 6.316 5.513 MuHd_105 : 15.798 14.893 4.432 4.912 Hmax_075 : 0.700 0.000 -1.787 1.930 Hmax_095 : 12.200 8.200 1.206 4.120 Hmax_100 : 3.400 5.500 -1.117 3.560 Hmax_105 : -5.425 2.400 -3.727 1.461 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6831 0.3169 DFMC : 0.7857 0.2143
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 250 BBOV_I001480 MFTARNEYDRGVNTFSPEGRIFQVEYALGAIKLGSTALAIATKEGVIFASEHRVNSPLMESVSLEKIMEIDTHIGCTMSG 80 LIADARTLIDHGRLECANHRFVYNEPLAIRSCVESIADMALDFSDIFDTRKKKTMSRPFGVALLVGGIDIDGPSIWCVDP 160 SGTSIKYKASAIGSAQEGAESVLQERYRDDMSFRDAELLVLEVLRQVMKDQMTTKNIEMARIKIHDRQFREYTEDEIGEI 240 IQDLPQMENM 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .......... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_I001480 5 --MFTAR|NE 0.091 . BBOV_I001480 10 ARNEYDR|GV 0.153 . BBOV_I001480 20 TFSPEGR|IF 0.111 . BBOV_I001480 32 YALGAIK|LG 0.062 . BBOV_I001480 43 ALAIATK|EG 0.057 . BBOV_I001480 53 IFASEHR|VN 0.088 . BBOV_I001480 66 ESVSLEK|IM 0.059 . BBOV_I001480 86 GLIADAR|TL 0.107 . BBOV_I001480 93 TLIDHGR|LE 0.094 . BBOV_I001480 100 LECANHR|FV 0.118 . BBOV_I001480 110 NEPLAIR|SC 0.104 . BBOV_I001480 130 SDIFDTR|KK 0.075 . BBOV_I001480 131 DIFDTRK|KK 0.077 . BBOV_I001480 132 IFDTRKK|KT 0.087 . BBOV_I001480 133 FDTRKKK|TM 0.248 . BBOV_I001480 137 KKKTMSR|PF 0.115 . BBOV_I001480 166 PSGTSIK|YK 0.077 . BBOV_I001480 168 GTSIKYK|AS 0.100 . BBOV_I001480 186 ESVLQER|YR 0.081 . BBOV_I001480 188 VLQERYR|DD 0.113 . BBOV_I001480 194 RDDMSFR|DA 0.135 . BBOV_I001480 205 LVLEVLR|QV 0.125 . BBOV_I001480 209 VLRQVMK|DQ 0.073 . BBOV_I001480 215 KDQMTTK|NI 0.077 . BBOV_I001480 221 KNIEMAR|IK 0.089 . BBOV_I001480 223 IEMARIK|IH 0.067 . BBOV_I001480 227 RIKIHDR|QF 0.102 . BBOV_I001480 230 IHDRQFR|EY 0.282 . ____________________________^_________________

  • Fasta :-

    >BBOV_I001480 ATGTTTACAGCTAGGAACGAATATGATAGGGGTGTAAATACCTTTTCTCCCGAGGGGAGA ATCTTTCAGGTGGAATATGCCCTAGGGGCCATTAAACTTGGAAGTACAGCACTTGCAATC GCAACTAAAGAAGGCGTCATTTTTGCGTCTGAACACCGTGTAAATTCACCGCTAATGGAA TCGGTTTCATTGGAAAAAATAATGGAAATCGACACTCACATCGGATGCACAATGAGTGGT CTAATTGCAGACGCTCGCACGCTAATTGACCATGGCCGCTTGGAGTGTGCAAACCATAGA TTTGTATACAATGAACCTTTGGCTATAAGGTCCTGTGTTGAGTCAATAGCGGATATGGCT CTCGACTTCTCAGATATATTTGATACAAGAAAAAAGAAAACCATGAGTAGACCTTTTGGT GTTGCGCTACTGGTAGGCGGAATCGACATAGATGGCCCCTCTATTTGGTGTGTCGACCCC TCTGGGACCAGTATCAAATATAAAGCATCGGCAATAGGTTCTGCTCAGGAAGGTGCGGAA TCCGTACTACAAGAAAGATATAGAGATGATATGAGTTTCAGAGATGCCGAGCTGCTTGTA CTGGAAGTACTCCGCCAGGTTATGAAAGATCAGATGACGACTAAAAACATTGAAATGGCT CGCATAAAAATTCATGACAGACAATTCAGGGAATATACAGAGGATGAAATTGGTGAAATT ATTCAAGATTTACCACAAATGGAGAATATGTAA
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  • Fasta :-

    MFTARNEYDRGVNTFSPEGRIFQVEYALGAIKLGSTALAIATKEGVIFASEHRVNSPLME SVSLEKIMEIDTHIGCTMSGLIADARTLIDHGRLECANHRFVYNEPLAIRSCVESIADMA LDFSDIFDTRKKKTMSRPFGVALLVGGIDIDGPSIWCVDPSGTSIKYKASAIGSAQEGAE SVLQERYRDDMSFRDAELLVLEVLRQVMKDQMTTKNIEMARIKIHDRQFREYTEDEIGEI IQDLPQMENM

  • title: active site
  • coordinates: S35,E51,R53,K66,S174
No Results
No Results
IDSitePeptideScoreMethod
BBOV_I001480192 SRDDMSFRDA0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India