BBOV_I002290 | 4-methyl-5(B-hydroxyethyl)-thiazol monophosphate biosynthesis enzyme, putative

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_IDPredictionOTHERSPmTPCS_Position
BBOV_I002290OTHER0.9990080.0006570.000335
No Results

  • Fasta :-

    >BBOV_I002290 MCFIFKMGSKEQKALIAVANGSEDIEFVTVVDVLRRAGVTVTVASVHKSKDVVMAHGTKI TADAAIDDVAKKTFDLIVVPGGLPGSTHCAESTTLIKMLNQHKDGNRYYAAICAAPAVVL AAGGILDKQTAAVAYPGFEDALPYVGKGRVCVSGKCVTSKAPGTAMEFALKLVELLCGVQ KKEQLKVGMLVHADI
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_I002290.fa Sequence name : BBOV_I002290 Sequence length : 195 VALUES OF COMPUTED PARAMETERS Coef20 : 4.116 CoefTot : -0.364 ChDiff : 3 ZoneTo : 10 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.882 2.218 0.481 0.759 MesoH : -0.160 0.662 -0.170 0.293 MuHd_075 : 12.252 5.296 3.680 2.208 MuHd_095 : 18.338 9.346 4.652 4.827 MuHd_100 : 21.539 12.652 5.816 5.656 MuHd_105 : 22.251 13.740 6.678 5.725 Hmax_075 : 10.700 10.033 1.953 3.780 Hmax_095 : 13.000 15.500 1.474 5.370 Hmax_100 : 13.000 15.500 1.567 5.370 Hmax_105 : 9.450 12.600 2.210 4.585 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9597 0.0403 DFMC : 0.9681 0.0319
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 195 BBOV_I002290 MCFIFKMGSKEQKALIAVANGSEDIEFVTVVDVLRRAGVTVTVASVHKSKDVVMAHGTKITADAAIDDVAKKTFDLIVVP 80 GGLPGSTHCAESTTLIKMLNQHKDGNRYYAAICAAPAVVLAAGGILDKQTAAVAYPGFEDALPYVGKGRVCVSGKCVTSK 160 APGTAMEFALKLVELLCGVQKKEQLKVGMLVHADI 240 ................................................................................ 80 ................................................................................ 160 ................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_I002290 6 -MCFIFK|MG 0.070 . BBOV_I002290 10 IFKMGSK|EQ 0.057 . BBOV_I002290 13 MGSKEQK|AL 0.093 . BBOV_I002290 35 TVVDVLR|RA 0.097 . BBOV_I002290 36 VVDVLRR|AG 0.103 . BBOV_I002290 48 TVASVHK|SK 0.102 . BBOV_I002290 50 ASVHKSK|DV 0.115 . BBOV_I002290 59 VMAHGTK|IT 0.061 . BBOV_I002290 71 AIDDVAK|KT 0.068 . BBOV_I002290 72 IDDVAKK|TF 0.088 . BBOV_I002290 97 ESTTLIK|ML 0.063 . BBOV_I002290 103 KMLNQHK|DG 0.064 . BBOV_I002290 107 QHKDGNR|YY 0.089 . BBOV_I002290 128 AGGILDK|QT 0.060 . BBOV_I002290 147 ALPYVGK|GR 0.060 . BBOV_I002290 149 PYVGKGR|VC 0.077 . BBOV_I002290 155 RVCVSGK|CV 0.092 . BBOV_I002290 160 GKCVTSK|AP 0.092 . BBOV_I002290 171 AMEFALK|LV 0.062 . BBOV_I002290 181 LLCGVQK|KE 0.061 . BBOV_I002290 182 LCGVQKK|EQ 0.121 . BBOV_I002290 186 QKKEQLK|VG 0.059 . ____________________________^_________________

  • Fasta :-

    >BBOV_I002290 GTCAATCTATAAAATTATAAAGTTATGTGCTTCATATTTAAAATGGGTTCTAAGGAACAG AAGGCATTGATAGCCGTGGCCAACGGATCGGAAGACATTGAATTTGTCACTGTTGTCGAC GTACTAAGACGTGCAGGAGTCACAGTAACAGTGGCATCAGTACATAAAAGCAAAGATGTG GTAATGGCTCACGGAACAAAGATTACAGCAGATGCCGCCATCGATGACGTCGCAAAAAAG ACTTTTGACCTCATCGTTGTACCAGGAGGTTTGCCAGGGTCCACACACTGCGCTGAGTCT ACGACGCTAATCAAAATGCTCAACCAACATAAAGATGGCAACCGTTACTATGCAGCAATA TGTGCAGCACCAGCCGTGGTACTCGCAGCTGGTGGTATTCTGGACAAGCAGACTGCTGCC GTTGCATACCCAGGGTTCGAAGATGCCCTACCATACGTCGGTAAAGGTCGTGTTTGTGTG TCTGGAAAATGCGTAACTTCAAAGGCACCGGGCACGGCAATGGAGTTTGCGCTCAAACTA GTAGAACTGCTTTGCGGCGTCCAAAAGAAAGAGCAACTCAAAGTAGGAATGCTCGTGCAT GCCGATATCTGAGTTACTAAGTACTGGTACTAAGTGACTCCGGAATCCTCTTCAACAAAT ACAGGAGTCGCCTGAACAAAAATGTTTAAAAGTAGAAATATACATTCTAAACAGCTGTAT AAATTTGCAAAGGAAACAACATCTTTAATTGTCTACGGCAAAAGCCAAT
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  • Fasta :-

    MCFIFKMGSKEQKALIAVANGSEDIEFVTVVDVLRRAGVTVTVASVHKSKDVVMAHGTKI TADAAIDDVAKKTFDLIVVPGGLPGSTHCAESTTLIKMLNQHKDGNRYYAAICAAPAVVL AAGGILDKQTAAVAYPGFEDALPYVGKGRVCVSGKCVTSKAPGTAMEFALKLVELLCGVQ KKEQLKVGMLVHADI

  • title: conserved cys residue
  • coordinates: C113
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India