BBOV_I002820 | conserved hypothetical protein

_IDPredictionOTHERSPmTPCS_Position
BBOV_I002820OTHER0.9999510.0000360.000014
No Results

  • Fasta :-

    >BBOV_I002820 MPTGKTFFSYDSLGYSYDSNGGDYDVTVLIEALRLRNFHCNYYTLNDMKLSTFQQRNDKC GFICNAHEHWFCVRMLMTDRWFILDSLRPGPQEIDYGSLYSFISTLLENKKGAVFLVSPS IPGMKLPEAEPHLYPKLESHQMFLSLDDIKRMLIQCDIKCVTELNDQGTHDFQDGEDKSF LYRAGRSKPGPVVWPTTGGVRLDDTSRVPVTTSTPKSDDDYTGSDACRVAVKLSGTARIT RSFNPRSSLSELFAWVEKHIDNTGEMFYTLLQTNPNRRLVKYVTGCIELIENEGPPRDGA NATLLDAGLESHEMFILRCD
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_I002820.fa Sequence name : BBOV_I002820 Sequence length : 320 VALUES OF COMPUTED PARAMETERS Coef20 : 3.280 CoefTot : -0.661 ChDiff : -9 ZoneTo : 10 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.518 0.859 -0.124 0.419 MesoH : -0.685 0.130 -0.418 0.181 MuHd_075 : 12.757 8.855 3.400 2.927 MuHd_095 : 10.356 5.910 1.413 0.482 MuHd_100 : 11.196 1.750 2.562 1.424 MuHd_105 : 18.875 6.527 5.409 3.115 Hmax_075 : 11.100 5.000 0.438 3.650 Hmax_095 : 3.413 1.575 -1.756 2.010 Hmax_100 : 8.500 2.200 0.272 3.200 Hmax_105 : 8.750 3.383 0.414 3.792 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9435 0.0565 DFMC : 0.9230 0.0770
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 320 BBOV_I002820 MPTGKTFFSYDSLGYSYDSNGGDYDVTVLIEALRLRNFHCNYYTLNDMKLSTFQQRNDKCGFICNAHEHWFCVRMLMTDR 80 WFILDSLRPGPQEIDYGSLYSFISTLLENKKGAVFLVSPSIPGMKLPEAEPHLYPKLESHQMFLSLDDIKRMLIQCDIKC 160 VTELNDQGTHDFQDGEDKSFLYRAGRSKPGPVVWPTTGGVRLDDTSRVPVTTSTPKSDDDYTGSDACRVAVKLSGTARIT 240 RSFNPRSSLSELFAWVEKHIDNTGEMFYTLLQTNPNRRLVKYVTGCIELIENEGPPRDGANATLLDAGLESHEMFILRCD 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_I002820 5 --MPTGK|TF 0.061 . BBOV_I002820 34 VLIEALR|LR 0.063 . BBOV_I002820 36 IEALRLR|NF 0.087 . BBOV_I002820 49 YTLNDMK|LS 0.057 . BBOV_I002820 56 LSTFQQR|ND 0.093 . BBOV_I002820 59 FQQRNDK|CG 0.109 . BBOV_I002820 74 EHWFCVR|ML 0.091 . BBOV_I002820 80 RMLMTDR|WF 0.064 . BBOV_I002820 88 FILDSLR|PG 0.076 . BBOV_I002820 110 STLLENK|KG 0.054 . BBOV_I002820 111 TLLENKK|GA 0.089 . BBOV_I002820 125 PSIPGMK|LP 0.064 . BBOV_I002820 136 EPHLYPK|LE 0.074 . BBOV_I002820 150 LSLDDIK|RM 0.054 . BBOV_I002820 151 SLDDIKR|ML 0.155 . BBOV_I002820 159 LIQCDIK|CV 0.074 . BBOV_I002820 178 FQDGEDK|SF 0.061 . BBOV_I002820 183 DKSFLYR|AG 0.095 . BBOV_I002820 186 FLYRAGR|SK 0.281 . BBOV_I002820 188 YRAGRSK|PG 0.070 . BBOV_I002820 201 PTTGGVR|LD 0.071 . BBOV_I002820 207 RLDDTSR|VP 0.062 . BBOV_I002820 216 VTTSTPK|SD 0.080 . BBOV_I002820 228 TGSDACR|VA 0.110 . BBOV_I002820 232 ACRVAVK|LS 0.081 . BBOV_I002820 238 KLSGTAR|IT 0.113 . BBOV_I002820 241 GTARITR|SF 0.307 . BBOV_I002820 246 TRSFNPR|SS 0.242 . BBOV_I002820 258 LFAWVEK|HI 0.079 . BBOV_I002820 277 LQTNPNR|RL 0.083 . BBOV_I002820 278 QTNPNRR|LV 0.198 . BBOV_I002820 281 PNRRLVK|YV 0.269 . BBOV_I002820 297 ENEGPPR|DG 0.084 . BBOV_I002820 318 HEMFILR|CD 0.091 . ____________________________^_________________

  • Fasta :-

    >BBOV_I002820 ATGCCTACAGGCAAGACTTTCTTCAGCTACGATTCTTTGGGTTATAGTTACGATTCCAAT GGCGGCGATTATGATGTAACGGTGTTGATTGAAGCATTGCGCTTGCGCAATTTTCACTGC AATTACTACACTTTGAATGACATGAAACTCAGCACGTTTCAGCAAAGGAATGATAAATGT GGTTTTATTTGCAACGCCCATGAGCACTGGTTTTGCGTGAGGATGCTTATGACCGATCGA TGGTTTATTTTAGACAGTTTGAGACCCGGTCCGCAGGAAATAGATTATGGATCGCTATAT TCGTTCATTAGCACTCTTCTGGAAAACAAGAAAGGTGCTGTGTTTTTGGTATCTCCTAGC ATACCAGGTATGAAGTTGCCTGAGGCTGAACCGCACCTGTATCCCAAGTTGGAAAGCCAT CAAATGTTTTTATCATTGGATGACATTAAACGTATGTTAATTCAGTGCGATATTAAATGC GTTACAGAACTGAACGACCAGGGCACCCATGACTTTCAGGATGGAGAGGACAAAAGCTTC CTCTATCGTGCTGGGCGTTCCAAACCAGGACCGGTTGTATGGCCCACCACAGGGGGGGTA CGCCTCGACGACACAAGCAGGGTACCCGTGACAACTTCCACACCAAAGAGCGACGACGAT TACACGGGCTCCGATGCTTGCAGGGTGGCCGTCAAACTCTCTGGTACTGCACGTATAACT CGAAGTTTTAATCCTCGGAGCTCCTTGAGTGAATTGTTCGCATGGGTGGAGAAGCACATT GACAACACAGGTGAGATGTTTTATACCCTGTTGCAAACCAATCCAAACCGTCGCCTTGTC AAATATGTCACTGGTTGTATCGAGTTGATAGAAAATGAAGGCCCCCCTCGGGATGGTGCT AACGCCACGTTGTTGGACGCCGGTTTAGAATCGCACGAGATGTTCATTTTGCGCTGTGAC TAA
  • Download Fasta

  • Fasta :-

    MPTGKTFFSYDSLGYSYDSNGGDYDVTVLIEALRLRNFHCNYYTLNDMKLSTFQQRNDKC GFICNAHEHWFCVRMLMTDRWFILDSLRPGPQEIDYGSLYSFISTLLENKKGAVFLVSPS IPGMKLPEAEPHLYPKLESHQMFLSLDDIKRMLIQCDIKCVTELNDQGTHDFQDGEDKSF LYRAGRSKPGPVVWPTTGGVRLDDTSRVPVTTSTPKSDDDYTGSDACRVAVKLSGTARIT RSFNPRSSLSELFAWVEKHIDNTGEMFYTLLQTNPNRRLVKYVTGCIELIENEGPPRDGA NATLLDAGLESHEMFILRCD

  • title: key conserved lysines
  • coordinates: K232,R277
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
BBOV_I002820217 SSTPKSDDDY0.997unspBBOV_I002820248 SNPRSSLSEL0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India