BBOV_I003700 | hypothetical protein

  • Computed_GO_Component_IDs:  GO:0016021      

  • Computed_GO_Components:  integral component of membrane      

  • Computed_GO_Function_IDs:  GO:0004252      

  • Computed_GO_Functions:  serine-type endopeptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
BBOV_I003700OTHER0.8218260.0020740.176100
No Results

  • Fasta :-

    >BBOV_I003700 MCKLGRMSTPLRYNALVRHRYLSFITSKTTYRNRALCRSEAVFIAPPFYRSHCYNVKDTG RSYSYQGQSQRSDHSGSFNRILCFGSTAFALCRSWDPKGYGDSEDDNIASLDESSSEGWY KDDDYFSVDIPIDFGHSNAHHSPRSGILSPSGDYPHNNSSDHGLCRDAIKSGSFSLMGII SSMNNVSPNGFGRFFLLCCGSVFGLWSLSDRIHNPWLSQFLQRHFLASRSSFDMRRWHTL LTSSISHASFFHLFLNCMMFHQLINTFARHMAPPLPSRPSVSSIDRLFSSLSSSIEGFFW PSTHTKRRMDTVQTSDIMGVMVLSGICSSLGHVALYKTPVYGASGAISGLLYLLASTFPN SYFHTVFPVPGLQVSILQICQMFVATNVYFLFFGTALRNIAWSAHLFGFGAGALYCYLQQ HVFKRRGFRNPVTLSFRTASSQWRRTFKGILH
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_I003700.fa Sequence name : BBOV_I003700 Sequence length : 452 VALUES OF COMPUTED PARAMETERS Coef20 : 4.545 CoefTot : -1.098 ChDiff : 17 ZoneTo : 95 KR : 15 DE : 3 CleavSite : 64 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.776 1.688 0.315 0.629 MesoH : 1.125 1.045 0.063 0.496 MuHd_075 : 33.856 19.477 9.519 7.827 MuHd_095 : 40.720 21.394 7.983 8.805 MuHd_100 : 38.083 18.162 7.721 8.011 MuHd_105 : 35.265 19.344 8.516 9.181 Hmax_075 : 10.733 14.233 -1.043 2.847 Hmax_095 : 9.013 9.537 1.555 4.331 Hmax_100 : 6.400 3.200 0.296 3.210 Hmax_105 : -3.100 17.800 0.755 6.810 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.1368 0.8632 DFMC : 0.0741 0.9259 This protein is probably imported in mitochondria. f(Ser) = 0.1368 f(Arg) = 0.1263 CMi = 0.55437 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 452 BBOV_I003700 MCKLGRMSTPLRYNALVRHRYLSFITSKTTYRNRALCRSEAVFIAPPFYRSHCYNVKDTGRSYSYQGQSQRSDHSGSFNR 80 ILCFGSTAFALCRSWDPKGYGDSEDDNIASLDESSSEGWYKDDDYFSVDIPIDFGHSNAHHSPRSGILSPSGDYPHNNSS 160 DHGLCRDAIKSGSFSLMGIISSMNNVSPNGFGRFFLLCCGSVFGLWSLSDRIHNPWLSQFLQRHFLASRSSFDMRRWHTL 240 LTSSISHASFFHLFLNCMMFHQLINTFARHMAPPLPSRPSVSSIDRLFSSLSSSIEGFFWPSTHTKRRMDTVQTSDIMGV 320 MVLSGICSSLGHVALYKTPVYGASGAISGLLYLLASTFPNSYFHTVFPVPGLQVSILQICQMFVATNVYFLFFGTALRNI 400 AWSAHLFGFGAGALYCYLQQHVFKRRGFRNPVTLSFRTASSQWRRTFKGILH 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_I003700 3 ----MCK|LG 0.059 . BBOV_I003700 6 -MCKLGR|MS 0.092 . BBOV_I003700 12 RMSTPLR|YN 0.106 . BBOV_I003700 18 RYNALVR|HR 0.093 . BBOV_I003700 20 NALVRHR|YL 0.096 . BBOV_I003700 28 LSFITSK|TT 0.063 . BBOV_I003700 32 TSKTTYR|NR 0.075 . BBOV_I003700 34 KTTYRNR|AL 0.113 . BBOV_I003700 38 RNRALCR|SE 0.117 . BBOV_I003700 50 IAPPFYR|SH 0.135 . BBOV_I003700 57 SHCYNVK|DT 0.084 . BBOV_I003700 61 NVKDTGR|SY 0.164 . BBOV_I003700 71 YQGQSQR|SD 0.142 . BBOV_I003700 80 HSGSFNR|IL 0.107 . BBOV_I003700 93 TAFALCR|SW 0.188 . BBOV_I003700 98 CRSWDPK|GY 0.155 . BBOV_I003700 121 SSEGWYK|DD 0.074 . BBOV_I003700 144 NAHHSPR|SG 0.175 . BBOV_I003700 166 SDHGLCR|DA 0.218 . BBOV_I003700 170 LCRDAIK|SG 0.102 . BBOV_I003700 193 SPNGFGR|FF 0.114 . BBOV_I003700 211 LWSLSDR|IH 0.112 . BBOV_I003700 223 LSQFLQR|HF 0.127 . BBOV_I003700 229 RHFLASR|SS 0.129 . BBOV_I003700 235 RSSFDMR|RW 0.154 . BBOV_I003700 236 SSFDMRR|WH 0.116 . BBOV_I003700 269 LINTFAR|HM 0.122 . BBOV_I003700 278 APPLPSR|PS 0.079 . BBOV_I003700 286 SVSSIDR|LF 0.085 . BBOV_I003700 306 WPSTHTK|RR 0.080 . BBOV_I003700 307 PSTHTKR|RM 0.229 . BBOV_I003700 308 STHTKRR|MD 0.265 . BBOV_I003700 337 GHVALYK|TP 0.058 . BBOV_I003700 398 FFGTALR|NI 0.076 . BBOV_I003700 424 LQQHVFK|RR 0.068 . BBOV_I003700 425 QQHVFKR|RG 0.205 . BBOV_I003700 426 QHVFKRR|GF 0.149 . BBOV_I003700 429 FKRRGFR|NP 0.170 . BBOV_I003700 437 PVTLSFR|TA 0.093 . BBOV_I003700 444 TASSQWR|RT 0.150 . BBOV_I003700 445 ASSQWRR|TF 0.240 . BBOV_I003700 448 QWRRTFK|GI 0.198 . ____________________________^_________________

  • Fasta :-

    >BBOV_I003700 ATGTGTAAGCTCGGCAGGATGTCAACACCGCTTCGATATAATGCTTTAGTACGACATCGA TACTTATCGTTTATTACGTCTAAAACAACCTATCGCAATAGGGCATTGTGTCGTTCGGAA GCTGTTTTTATAGCTCCTCCATTTTACAGGAGTCATTGCTATAATGTGAAGGACACTGGC CGCTCTTATAGTTACCAAGGTCAATCTCAGCGCTCAGACCACAGCGGGTCATTTAATCGC ATTTTATGCTTCGGCAGTACTGCTTTTGCTCTATGCCGATCCTGGGATCCTAAGGGTTAT GGAGACAGCGAGGATGATAACATAGCCTCACTTGATGAAAGCTCATCTGAGGGTTGGTAT AAGGATGATGACTACTTTAGTGTTGACATACCTATAGATTTTGGTCACTCCAATGCGCAT CATTCACCTCGCAGCGGTATATTATCCCCTTCAGGTGATTATCCTCATAACAATTCAAGT GACCATGGTTTATGTCGTGATGCTATAAAATCAGGTTCATTTTCTTTGATGGGTATTATA TCATCTATGAACAATGTATCTCCTAATGGTTTTGGGAGGTTCTTTTTACTTTGTTGTGGA TCTGTTTTTGGTCTTTGGTCTTTGAGTGACCGTATTCACAACCCATGGTTATCGCAATTT CTTCAACGTCATTTTCTGGCTTCTCGTAGTTCGTTCGATATGCGCCGGTGGCATACGTTA TTGACATCTAGTATTAGTCATGCATCATTTTTCCATTTATTTCTTAACTGCATGATGTTT CATCAGTTGATCAACACGTTTGCTCGTCACATGGCACCACCATTACCAAGTCGACCTTCA GTTTCGTCTATTGACCGTTTATTTTCGTCGTTAAGTTCGAGTATCGAGGGTTTCTTTTGG CCAAGTACCCATACCAAACGTCGTATGGATACTGTCCAGACATCGGACATTATGGGTGTG ATGGTCCTATCTGGTATATGTTCTAGTTTGGGCCACGTGGCACTGTACAAGACCCCTGTT TATGGTGCTTCTGGCGCCATATCTGGTTTATTATATCTGCTGGCATCAACATTTCCGAAT AGTTACTTTCATACTGTTTTCCCGGTACCTGGTTTACAAGTCAGCATTTTGCAGATATGT CAGATGTTTGTGGCTACTAATGTCTACTTTCTATTTTTCGGGACTGCTTTACGTAACATA GCCTGGTCTGCGCATTTGTTTGGTTTTGGTGCTGGAGCATTATATTGTTATTTACAGCAG CATGTTTTCAAGCGTCGCGGTTTTCGCAATCCTGTTACATTATCGTTCCGCACTGCTAGC AGTCAATGGCGCAGGACCTTTAAGGGTATATTGCACTAA
  • Download Fasta

  • Fasta :-

    MCKLGRMSTPLRYNALVRHRYLSFITSKTTYRNRALCRSEAVFIAPPFYRSHCYNVKDTG RSYSYQGQSQRSDHSGSFNRILCFGSTAFALCRSWDPKGYGDSEDDNIASLDESSSEGWY KDDDYFSVDIPIDFGHSNAHHSPRSGILSPSGDYPHNNSSDHGLCRDAIKSGSFSLMGII SSMNNVSPNGFGRFFLLCCGSVFGLWSLSDRIHNPWLSQFLQRHFLASRSSFDMRRWHTL LTSSISHASFFHLFLNCMMFHQLINTFARHMAPPLPSRPSVSSIDRLFSSLSSSIEGFFW PSTHTKRRMDTVQTSDIMGVMVLSGICSSLGHVALYKTPVYGASGAISGLLYLLASTFPN SYFHTVFPVPGLQVSILQICQMFVATNVYFLFFGTALRNIAWSAHLFGFGAGALYCYLQQ HVFKRRGFRNPVTLSFRTASSQWRRTFKGILH

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
BBOV_I003700293 SSSLSSSIEG0.992unspBBOV_I003700293 SSSLSSSIEG0.992unspBBOV_I003700293 SSSLSSSIEG0.992unspBBOV_I003700142 SNAHHSPRSG0.994unspBBOV_I003700280 SPSRPSVSSI0.991unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India