BBOV_I004260 | conserved hypothetical protein

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_IDPredictionOTHERSPmTPCS_Position
BBOV_I004260OTHER0.8314310.0309650.137604
No Results

  • Fasta :-

    >BBOV_I004260 MLGINLSCAKDIGRTLVYTFCSAHVITKYAVDVTLTQGPSMVPTIDESRAIAFFVRPHLL RILRGSPVPIYRDGDIVIAKSPTNATRRICKRVVVISPEHRGDIMVPEGHVWLEGDNKSN SLDSRYYGAVSSHLLLGRVFLVISQSTGVSVL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_I004260.fa Sequence name : BBOV_I004260 Sequence length : 152 VALUES OF COMPUTED PARAMETERS Coef20 : 4.201 CoefTot : -1.418 ChDiff : 5 ZoneTo : 45 KR : 3 DE : 2 CleavSite : 24 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.935 1.529 0.086 0.522 MesoH : -0.595 0.449 -0.292 0.184 MuHd_075 : 35.722 31.170 12.449 8.804 MuHd_095 : 33.931 24.426 9.510 8.325 MuHd_100 : 33.617 22.717 8.085 8.177 MuHd_105 : 38.487 20.136 9.383 7.790 Hmax_075 : 18.400 25.200 5.830 6.810 Hmax_095 : 16.800 19.200 4.975 5.066 Hmax_100 : 16.600 18.100 4.278 6.520 Hmax_105 : 16.500 16.300 3.394 6.150 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6883 0.3117 DFMC : 0.8148 0.1852
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 152 BBOV_I004260 MLGINLSCAKDIGRTLVYTFCSAHVITKYAVDVTLTQGPSMVPTIDESRAIAFFVRPHLLRILRGSPVPIYRDGDIVIAK 80 SPTNATRRICKRVVVISPEHRGDIMVPEGHVWLEGDNKSNSLDSRYYGAVSSHLLLGRVFLVISQSTGVSVL 160 ................................................................................ 80 ........................................................................ 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_I004260 10 INLSCAK|DI 0.084 . BBOV_I004260 14 CAKDIGR|TL 0.075 . BBOV_I004260 28 SAHVITK|YA 0.094 . BBOV_I004260 49 PTIDESR|AI 0.076 . BBOV_I004260 56 AIAFFVR|PH 0.070 . BBOV_I004260 61 VRPHLLR|IL 0.091 . BBOV_I004260 64 HLLRILR|GS 0.131 . BBOV_I004260 72 SPVPIYR|DG 0.131 . BBOV_I004260 80 GDIVIAK|SP 0.084 . BBOV_I004260 87 SPTNATR|RI 0.102 . BBOV_I004260 88 PTNATRR|IC 0.139 . BBOV_I004260 91 ATRRICK|RV 0.161 . BBOV_I004260 92 TRRICKR|VV 0.368 . BBOV_I004260 101 VISPEHR|GD 0.105 . BBOV_I004260 118 WLEGDNK|SN 0.070 . BBOV_I004260 125 SNSLDSR|YY 0.168 . BBOV_I004260 138 SHLLLGR|VF 0.071 . ____________________________^_________________

  • Fasta :-

    >BBOV_I004260 TAGTACTACTTTATTTTGCTTCTGTTATATATTCTTGTATGTTTACAATCGAGATGTTAA TCTAGGATGCTGGGTATTAATTTATCTTGTGCTAAGGACATCGGTCGCACATTGGTTTAT ACATTTTGTTCGGCTCACGTGATAACTAAATATGCAGTGGATGTTACTTTGACTCAGGGT CCTAGTATGGTCCCTACTATAGATGAATCACGTGCCATTGCATTTTTTGTTCGTCCACAT TTACTGCGTATATTGCGTGGCAGTCCCGTTCCAATATACCGTGACGGTGACATTGTGATT GCCAAATCGCCTACAAATGCCACTCGTCGTATTTGCAAGCGTGTCGTTGTAATTTCACCT GAGCATCGTGGTGACATTATGGTTCCTGAGGGCCACGTGTGGTTAGAAGGTGACAACAAG TCGAACTCCCTTGACAGTCGATACTACGGCGCCGTATCATCTCACTTGTTGCTGGGTCGT GTATTTCTGGTTATATCGCAAAGTACCGGGGTCAGCGTACTCTAACAATGCCTCG
  • Download Fasta

  • Fasta :-

    MLGINLSCAKDIGRTLVYTFCSAHVITKYAVDVTLTQGPSMVPTIDESRAIAFFVRPHLL RILRGSPVPIYRDGDIVIAKSPTNATRRICKRVVVISPEHRGDIMVPEGHVWLEGDNKSN SLDSRYYGAVSSHLLLGRVFLVISQSTGVSVL

  • title: Catalytic site
  • coordinates: S40,K91
No Results
No Results
IDSitePeptideScoreMethod
BBOV_I00426081 SVIAKSPTNA0.992unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India