BBOV_II000950 | hypothetical protein

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_IDPredictionOTHERSPmTPCS_Position
BBOV_II000950OTHER0.9993310.0006090.000060
No Results

  • Fasta :-

    >BBOV_II000950 MIDLTCEIDEIDYELFDVHESFRHLNDICFDQSLSAVVLSWSKKMTVSAGRCRFKENRYC EIILSEPILKYRSAKECEETLLHEMIHAYLFLTKKSKTLNAHGKVSVYVGWNISQDFIWH MNRVNDITGLNVDIYHNFIDEVEYNRRHVWRCSVSYL
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_II000950.fa Sequence name : BBOV_II000950 Sequence length : 157 VALUES OF COMPUTED PARAMETERS Coef20 : 2.947 CoefTot : 0.000 ChDiff : -5 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.524 0.829 -0.168 0.412 MesoH : -1.189 -0.050 -0.586 0.119 MuHd_075 : 23.988 10.682 5.885 2.579 MuHd_095 : 25.774 14.941 5.000 4.197 MuHd_100 : 36.748 22.049 7.972 6.034 MuHd_105 : 38.005 25.340 9.175 6.682 Hmax_075 : 5.017 9.917 1.180 3.080 Hmax_095 : 9.700 17.800 1.448 5.940 Hmax_100 : 9.600 19.200 1.742 6.000 Hmax_105 : 1.225 13.737 -0.734 4.603 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9478 0.0522 DFMC : 0.9369 0.0631
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 157 BBOV_II000950 MIDLTCEIDEIDYELFDVHESFRHLNDICFDQSLSAVVLSWSKKMTVSAGRCRFKENRYCEIILSEPILKYRSAKECEET 80 LLHEMIHAYLFLTKKSKTLNAHGKVSVYVGWNISQDFIWHMNRVNDITGLNVDIYHNFIDEVEYNRRHVWRCSVSYL 160 ................................................................................ 80 ............................................................................. 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_II000950 23 DVHESFR|HL 0.110 . BBOV_II000950 43 VVLSWSK|KM 0.051 . BBOV_II000950 44 VLSWSKK|MT 0.147 . BBOV_II000950 51 MTVSAGR|CR 0.083 . BBOV_II000950 53 VSAGRCR|FK 0.101 . BBOV_II000950 55 AGRCRFK|EN 0.070 . BBOV_II000950 58 CRFKENR|YC 0.141 . BBOV_II000950 70 LSEPILK|YR 0.079 . BBOV_II000950 72 EPILKYR|SA 0.239 . BBOV_II000950 75 LKYRSAK|EC 0.229 . BBOV_II000950 94 AYLFLTK|KS 0.058 . BBOV_II000950 95 YLFLTKK|SK 0.109 . BBOV_II000950 97 FLTKKSK|TL 0.070 . BBOV_II000950 104 TLNAHGK|VS 0.079 . BBOV_II000950 123 FIWHMNR|VN 0.082 . BBOV_II000950 146 DEVEYNR|RH 0.058 . BBOV_II000950 147 EVEYNRR|HV 0.139 . BBOV_II000950 151 NRRHVWR|CS 0.149 . ____________________________^_________________

  • Fasta :-

    >BBOV_II000950 ATGATTGACTTAACATGTGAAATTGATGAAATTGATTACGAATTGTTCGATGTGCACGAA TCTTTCCGCCATTTGAACGATATTTGCTTTGATCAAAGTCTAAGTGCTGTTGTTCTGTCT TGGAGTAAGAAAATGACGGTTAGTGCTGGCAGATGTCGTTTCAAGGAAAATCGATATTGT GAAATAATTTTGAGTGAACCCATTTTAAAGTACAGATCAGCTAAAGAATGTGAAGAAACA CTGTTGCATGAGATGATACATGCATATCTTTTTCTGACTAAAAAAAGTAAAACTCTAAAT GCACATGGAAAGGTTAGTGTCTATGTAGGCTGGAATATATCTCAGGACTTCATATGGCAT ATGAACCGTGTAAATGACATTACCGGGCTCAATGTCGATATATATCACAACTTCATAGAT GAGGTGGAATATAATCGACGTCACGTATGGAGGTGTTCCGTAAGTTATTTATGA
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  • Fasta :-

    MIDLTCEIDEIDYELFDVHESFRHLNDICFDQSLSAVVLSWSKKMTVSAGRCRFKENRYC EIILSEPILKYRSAKECEETLLHEMIHAYLFLTKKSKTLNAHGKVSVYVGWNISQDFIWH MNRVNDITGLNVDIYHNFIDEVEYNRRHVWRCSVSYL

    No Results
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IDSitePeptideScoreMethod
BBOV_II00095073 SLKYRSAKEC0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India