BBOV_II002240 | hypothetical protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
BBOV_II002240OTHER0.9999530.0000420.000005
No Results

  • Fasta :-

    >BBOV_II002240 MGIEATLICVDNSEYSRNGDFPPSRLAAQVDAIGLIASARLSEHFENLVGIVCLAAHGSR LIAAPSNDLGTFLAGLQMVKPYGESEFLKGLQTAQLALKHRLNKSQQQRIICFVASPIKE NSALCTSVGKLLKKNNVILDIINMCNDIETERKLILLHEAVNNNDMSHYLNCKPGSDMLL SEIILNSAIMQGGSDSNSSVRYSSNLNELDVDPELDPQLYMALRMSLEQEEERLQRESTP ALPEDSNTETMLTMADLENEIKDMAGLEVVPLPRVMEMLMTCEGNSELLESLIYSLPEVD MEDERLKELLEKLKVLLPRLQLQ
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_II002240.fa Sequence name : BBOV_II002240 Sequence length : 323 VALUES OF COMPUTED PARAMETERS Coef20 : 3.476 CoefTot : -0.250 ChDiff : -21 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.912 1.718 0.199 0.526 MesoH : -0.324 0.507 -0.295 0.266 MuHd_075 : 12.274 2.682 2.481 1.893 MuHd_095 : 12.051 1.405 3.920 1.741 MuHd_100 : 23.353 5.371 7.214 1.512 MuHd_105 : 29.948 8.958 9.227 2.398 Hmax_075 : 0.817 6.533 0.119 2.532 Hmax_095 : 0.087 3.500 0.122 1.740 Hmax_100 : 6.900 6.000 1.233 2.470 Hmax_105 : 11.100 8.500 3.337 2.910 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9962 0.0038 DFMC : 0.9914 0.0086
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 323 BBOV_II002240 MGIEATLICVDNSEYSRNGDFPPSRLAAQVDAIGLIASARLSEHFENLVGIVCLAAHGSRLIAAPSNDLGTFLAGLQMVK 80 PYGESEFLKGLQTAQLALKHRLNKSQQQRIICFVASPIKENSALCTSVGKLLKKNNVILDIINMCNDIETERKLILLHEA 160 VNNNDMSHYLNCKPGSDMLLSEIILNSAIMQGGSDSNSSVRYSSNLNELDVDPELDPQLYMALRMSLEQEEERLQRESTP 240 ALPEDSNTETMLTMADLENEIKDMAGLEVVPLPRVMEMLMTCEGNSELLESLIYSLPEVDMEDERLKELLEKLKVLLPRL 320 QLQ 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_II002240 17 DNSEYSR|NG 0.072 . BBOV_II002240 25 GDFPPSR|LA 0.106 . BBOV_II002240 40 GLIASAR|LS 0.119 . BBOV_II002240 60 LAAHGSR|LI 0.077 . BBOV_II002240 80 AGLQMVK|PY 0.066 . BBOV_II002240 89 GESEFLK|GL 0.091 . BBOV_II002240 99 TAQLALK|HR 0.057 . BBOV_II002240 101 QLALKHR|LN 0.097 . BBOV_II002240 104 LKHRLNK|SQ 0.226 . BBOV_II002240 109 NKSQQQR|II 0.128 . BBOV_II002240 119 FVASPIK|EN 0.061 . BBOV_II002240 130 LCTSVGK|LL 0.059 . BBOV_II002240 133 SVGKLLK|KN 0.067 . BBOV_II002240 134 VGKLLKK|NN 0.072 . BBOV_II002240 152 NDIETER|KL 0.070 . BBOV_II002240 153 DIETERK|LI 0.070 . BBOV_II002240 173 SHYLNCK|PG 0.070 . BBOV_II002240 201 DSNSSVR|YS 0.100 . BBOV_II002240 224 QLYMALR|MS 0.091 . BBOV_II002240 233 LEQEEER|LQ 0.081 . BBOV_II002240 236 EEERLQR|ES 0.250 . BBOV_II002240 262 DLENEIK|DM 0.065 . BBOV_II002240 274 EVVPLPR|VM 0.076 . BBOV_II002240 305 VDMEDER|LK 0.073 . BBOV_II002240 307 MEDERLK|EL 0.062 . BBOV_II002240 312 LKELLEK|LK 0.055 . BBOV_II002240 314 ELLEKLK|VL 0.057 . BBOV_II002240 319 LKVLLPR|LQ 0.091 . ____________________________^_________________

  • Fasta :-

    >BBOV_II002240 ATGGGAATCGAAGCGACGCTAATATGCGTCGATAACTCAGAGTACTCGAGGAACGGAGAT TTCCCTCCCAGCAGGTTGGCTGCGCAGGTGGACGCAATAGGGTTAATCGCAAGCGCCAGG CTCTCTGAACATTTTGAAAACTTGGTGGGTATTGTCTGCCTCGCAGCCCATGGGTCGCGT CTTATAGCCGCGCCCTCAAATGACCTGGGTACTTTTCTTGCAGGACTCCAAATGGTAAAA CCATACGGAGAAAGCGAATTCTTAAAGGGTCTTCAAACTGCACAGTTGGCATTAAAGCAC AGATTAAATAAATCACAGCAACAACGTATCATATGCTTCGTTGCAAGTCCGATCAAAGAA AATAGTGCACTTTGTACCAGTGTAGGGAAATTGTTAAAGAAGAACAATGTTATATTGGAT ATCATTAATATGTGCAACGACATCGAGACTGAACGTAAGCTTATTTTGCTACATGAGGCA GTTAACAACAATGATATGTCTCACTACCTTAACTGTAAACCAGGTTCCGATATGTTGCTC AGTGAAATAATTCTCAATTCCGCAATAATGCAAGGCGGTAGCGATTCCAATAGTTCTGTC AGATACAGCTCGAACTTGAACGAATTGGATGTGGATCCCGAATTAGACCCTCAACTGTAC ATGGCTCTAAGGATGTCTCTAGAACAAGAGGAAGAACGTCTCCAACGAGAATCCACTCCT GCACTACCGGAAGATAGTAACACGGAAACTATGTTGACAATGGCGGATCTCGAAAATGAA ATCAAGGACATGGCCGGTCTAGAGGTCGTTCCTTTACCTAGGGTCATGGAGATGTTGATG ACCTGTGAGGGTAACAGCGAACTATTGGAATCTCTGATTTATTCCCTCCCGGAGGTGGAT ATGGAGGACGAACGTCTCAAGGAACTGCTAGAGAAACTTAAAGTATTGCTTCCAAGGTTG CAGTTGCAGTAG
  • Download Fasta

  • Fasta :-

    MGIEATLICVDNSEYSRNGDFPPSRLAAQVDAIGLIASARLSEHFENLVGIVCLAAHGSR LIAAPSNDLGTFLAGLQMVKPYGESEFLKGLQTAQLALKHRLNKSQQQRIICFVASPIKE NSALCTSVGKLLKKNNVILDIINMCNDIETERKLILLHEAVNNNDMSHYLNCKPGSDMLL SEIILNSAIMQGGSDSNSSVRYSSNLNELDVDPELDPQLYMALRMSLEQEEERLQRESTP ALPEDSNTETMLTMADLENEIKDMAGLEVVPLPRVMEMLMTCEGNSELLESLIYSLPEVD MEDERLKELLEKLKVLLPRLQLQ

    No Results
  • title: metal ion-dependent adhesion site (MIDAS)
  • coordinates: D11,S85,A115
No Results
No Results
IDSitePeptideScoreMethod
BBOV_II002240226 SALRMSLEQE0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India