BBOV_II002330 | proteasome subunit alpha type 6 protein, putative

_IDPredictionOTHERSPmTPCS_Position
BBOV_II002330OTHER0.9998650.0000530.000082
No Results

  • Fasta :-

    >BBOV_II002330 MSRASNAAYDRHITIFSPEGKLFQLEYALKAVKNSNITGLAIKDNDAIAVVCQKKLSVQQ GNQDVLLDQTCVTHLYHITDDIMALLIGLPGDCMSILYKSREIALEYQYKYGCSIPAKVL CEKIADINQVHTQHAYMRLRACTGLIAAIDEELKPVIYKFDASGWYSGYKACGIGTKDQE SENALERILKQRETVDISDKIKSDLQVNTETHHLSGGKETHVTVEGLKALIAIDALSQLN GAKGVEVAVCTIDNPTFRQLSEQEIETYLTYIAETD
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_II002330.fa Sequence name : BBOV_II002330 Sequence length : 276 VALUES OF COMPUTED PARAMETERS Coef20 : 3.955 CoefTot : 0.491 ChDiff : -9 ZoneTo : 9 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.376 1.694 0.283 0.650 MesoH : -0.751 0.361 -0.349 0.197 MuHd_075 : 10.596 4.646 4.197 2.681 MuHd_095 : 32.712 16.349 6.030 6.702 MuHd_100 : 28.798 13.757 5.087 5.937 MuHd_105 : 20.612 7.514 3.465 3.803 Hmax_075 : 7.700 5.250 0.683 3.465 Hmax_095 : 11.000 8.800 -0.240 3.900 Hmax_100 : 11.000 8.800 -0.240 3.900 Hmax_105 : 5.900 4.375 -1.148 2.720 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8483 0.1517 DFMC : 0.8865 0.1135
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 276 BBOV_II002330 MSRASNAAYDRHITIFSPEGKLFQLEYALKAVKNSNITGLAIKDNDAIAVVCQKKLSVQQGNQDVLLDQTCVTHLYHITD 80 DIMALLIGLPGDCMSILYKSREIALEYQYKYGCSIPAKVLCEKIADINQVHTQHAYMRLRACTGLIAAIDEELKPVIYKF 160 DASGWYSGYKACGIGTKDQESENALERILKQRETVDISDKIKSDLQVNTETHHLSGGKETHVTVEGLKALIAIDALSQLN 240 GAKGVEVAVCTIDNPTFRQLSEQEIETYLTYIAETD 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_II002330 3 ----MSR|AS 0.100 . BBOV_II002330 11 SNAAYDR|HI 0.098 . BBOV_II002330 21 IFSPEGK|LF 0.061 . BBOV_II002330 30 QLEYALK|AV 0.072 . BBOV_II002330 33 YALKAVK|NS 0.055 . BBOV_II002330 43 ITGLAIK|DN 0.074 . BBOV_II002330 54 IAVVCQK|KL 0.071 . BBOV_II002330 55 AVVCQKK|LS 0.102 . BBOV_II002330 99 CMSILYK|SR 0.103 . BBOV_II002330 101 SILYKSR|EI 0.081 . BBOV_II002330 110 ALEYQYK|YG 0.071 . BBOV_II002330 118 GCSIPAK|VL 0.085 . BBOV_II002330 123 AKVLCEK|IA 0.074 . BBOV_II002330 138 TQHAYMR|LR 0.088 . BBOV_II002330 140 HAYMRLR|AC 0.105 . BBOV_II002330 154 AIDEELK|PV 0.067 . BBOV_II002330 159 LKPVIYK|FD 0.067 . BBOV_II002330 170 GWYSGYK|AC 0.079 . BBOV_II002330 177 ACGIGTK|DQ 0.068 . BBOV_II002330 187 SENALER|IL 0.103 . BBOV_II002330 190 ALERILK|QR 0.120 . BBOV_II002330 192 ERILKQR|ET 0.108 . BBOV_II002330 200 TVDISDK|IK 0.066 . BBOV_II002330 202 DISDKIK|SD 0.095 . BBOV_II002330 218 HHLSGGK|ET 0.063 . BBOV_II002330 228 VTVEGLK|AL 0.061 . BBOV_II002330 243 SQLNGAK|GV 0.106 . BBOV_II002330 258 IDNPTFR|QL 0.167 . ____________________________^_________________

  • Fasta :-

    >BBOV_II002330 ATGTCAAGGGCATCTAACGCAGCCTATGACAGGCATATAACTATATTCTCGCCAGAAGGG AAACTGTTTCAACTTGAATATGCGCTCAAGGCAGTGAAAAATTCGAACATCACAGGTTTA GCAATAAAGGATAACGATGCTATCGCAGTTGTGTGTCAAAAAAAACTTTCCGTTCAACAA GGTAACCAGGACGTTCTTCTCGATCAAACATGTGTAACACATCTTTACCATATAACGGAC GATATAATGGCATTGCTAATTGGTTTACCAGGTGACTGTATGAGTATATTGTACAAGAGT CGTGAAATCGCATTGGAGTACCAATACAAATATGGTTGTAGCATACCTGCAAAAGTATTG TGTGAAAAGATAGCTGATATCAACCAAGTACATACCCAGCACGCTTACATGCGTCTGCGT GCGTGTACCGGTTTAATTGCCGCTATTGATGAAGAGTTGAAGCCAGTCATATACAAATTC GATGCGTCCGGATGGTACAGTGGCTATAAAGCATGTGGTATCGGTACGAAGGATCAAGAG TCTGAAAATGCACTAGAGAGAATTTTAAAACAACGTGAAACTGTGGATATCAGTGACAAG ATAAAGTCGGATCTGCAGGTTAATACGGAGACGCATCATCTATCTGGTGGTAAAGAGACT CATGTTACAGTTGAGGGTTTAAAGGCTTTGATCGCAATCGATGCACTAAGCCAATTAAAT GGTGCAAAGGGAGTGGAAGTAGCCGTTTGCACAATTGATAATCCAACATTTAGGCAACTA AGTGAACAAGAGATTGAGACCTATCTCACATATATAGCGGAAACGGATTGAATGATTAAT TTTGTGTATTTGATTGTTTC
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  • Fasta :-

    MSRASNAAYDRHITIFSPEGKLFQLEYALKAVKNSNITGLAIKDNDAIAVVCQKKLSVQQ GNQDVLLDQTCVTHLYHITDDIMALLIGLPGDCMSILYKSREIALEYQYKYGCSIPAKVL CEKIADINQVHTQHAYMRLRACTGLIAAIDEELKPVIYKFDASGWYSGYKACGIGTKDQE SENALERILKQRETVDISDKIKSDLQVNTETHHLSGGKETHVTVEGLKALIAIDALSQLN GAKGVEVAVCTIDNPTFRQLSEQEIETYLTYIAETD

  • title: active site
  • coordinates: I37,Q53,K55,H74
No Results
No Results
IDSitePeptideScoreMethod
BBOV_II002330261 SFRQLSEQEI0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India