BBOV_II002710 | proteasome A-type and B-type family protein

_IDPredictionOTHERSPmTPCS_Position
BBOV_II002710OTHER0.9999100.0000590.000031
No Results

  • Fasta :-

    >BBOV_II002710 MEHHSDFNPYVNNGGTVVAAVWNNCAVIAADTRLSIGYAIHTRNVSKLKKLTQTCVIGTS GMQADMHALHSALERQIELYRFKHHREPGISVIAQLLSTILYSRRFFPYYTFNILCGVDE NGRGITCGFDAIGNYGFDAYMAKGTSSSLIMSILDNHLTSRNQQKHNEIQSLEELINVIK GAMTSAVERDIFTGDAAEVIVIDSMVHDPIRMPMRVD
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_II002710.fa Sequence name : BBOV_II002710 Sequence length : 217 VALUES OF COMPUTED PARAMETERS Coef20 : 2.966 CoefTot : 0.000 ChDiff : -3 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.118 1.376 0.140 0.550 MesoH : -0.304 0.323 -0.244 0.232 MuHd_075 : 12.120 7.158 5.662 1.597 MuHd_095 : 13.836 10.887 3.193 3.791 MuHd_100 : 22.376 16.680 5.307 5.201 MuHd_105 : 26.665 20.379 6.529 5.907 Hmax_075 : 5.950 1.663 -0.583 2.100 Hmax_095 : 7.200 5.900 -0.386 4.220 Hmax_100 : 8.800 10.500 0.175 4.840 Hmax_105 : 12.900 13.700 0.697 5.220 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9861 0.0139 DFMC : 0.9873 0.0127
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 217 BBOV_II002710 MEHHSDFNPYVNNGGTVVAAVWNNCAVIAADTRLSIGYAIHTRNVSKLKKLTQTCVIGTSGMQADMHALHSALERQIELY 80 RFKHHREPGISVIAQLLSTILYSRRFFPYYTFNILCGVDENGRGITCGFDAIGNYGFDAYMAKGTSSSLIMSILDNHLTS 160 RNQQKHNEIQSLEELINVIKGAMTSAVERDIFTGDAAEVIVIDSMVHDPIRMPMRVD 240 ................................................................................ 80 ................................................................................ 160 ......................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_II002710 33 VIAADTR|LS 0.073 . BBOV_II002710 43 GYAIHTR|NV 0.140 . BBOV_II002710 47 HTRNVSK|LK 0.064 . BBOV_II002710 49 RNVSKLK|KL 0.067 . BBOV_II002710 50 NVSKLKK|LT 0.113 . BBOV_II002710 75 LHSALER|QI 0.132 . BBOV_II002710 81 RQIELYR|FK 0.111 . BBOV_II002710 83 IELYRFK|HH 0.060 . BBOV_II002710 86 YRFKHHR|EP 0.152 . BBOV_II002710 104 STILYSR|RF 0.071 . BBOV_II002710 105 TILYSRR|FF 0.130 . BBOV_II002710 123 GVDENGR|GI 0.093 . BBOV_II002710 143 FDAYMAK|GT 0.092 . BBOV_II002710 161 DNHLTSR|NQ 0.086 . BBOV_II002710 165 TSRNQQK|HN 0.089 . BBOV_II002710 180 ELINVIK|GA 0.071 . BBOV_II002710 189 MTSAVER|DI 0.195 . BBOV_II002710 211 MVHDPIR|MP 0.093 . BBOV_II002710 215 PIRMPMR|VD 0.095 . ____________________________^_________________

  • Fasta :-

    >BBOV_II002710 ATGGAGCATCATAGTGATTTTAACCCCTATGTGAATAACGGAGGAACAGTGGTTGCCGCC GTCTGGAACAACTGCGCGGTAATCGCCGCGGACACCCGTTTGTCTATAGGTTACGCAATA CATACACGAAATGTATCTAAACTAAAGAAGCTGACCCAGACCTGCGTCATTGGGACTTCG GGTATGCAAGCGGATATGCACGCTCTACATTCCGCCCTAGAGCGCCAAATCGAGCTCTAC CGCTTCAAACACCACAGGGAGCCTGGAATATCTGTTATTGCACAGTTGCTTTCAACCATA CTCTACAGCCGTAGATTCTTCCCATACTATACATTTAATATACTATGCGGTGTCGATGAA AATGGTCGGGGTATAACCTGTGGTTTCGACGCCATCGGTAACTATGGCTTTGATGCATAC ATGGCCAAAGGCACCAGCTCCTCGTTAATCATGTCAATACTAGACAATCACTTGACAAGT CGAAACCAACAGAAGCACAACGAGATACAATCGCTAGAGGAACTGATTAACGTTATCAAA GGCGCAATGACCAGCGCGGTGGAGCGCGATATTTTCACAGGCGATGCTGCTGAAGTTATT GTAATCGATTCTATGGTACACGATCCCATACGCATGCCCATGCGCGTGGATTAGAGATCA CTATTGTACTAATTTACGTCCTACGTTACGTTGTAGCATAACCGGTTGCCGCGGTTGCAT TGTGTTGGCGTTGACAAACTGGTTTAACCCACCTGAGAAAACAGGTTGTACCATAGATGC ATCCTGCGTTCCCCTAATTTGATTCACCGGCTGGTGGAGGTATTTGAGAGTGCCAGGCTG GGCGTTGGGCACCTGTGGCACACCTTGAGGATAGAATATCTGCGGAGCGTTCTGATTCAT AGCGGGAGCCCTAAAAGGAACCCGTGGGTTAACTGCCATATAAGGTACCTGCGGTACAAA TGGCAATTGATTACGAGGGTGAATGGGCATCTTTGCACCCATTGAGCGGTGTACGAATTG GTTGTTAAGCATCTGTATACGATGCCTTTCAACGTCCTCTTTGGCTTTACGTATAATGGC ATCAATCTCAGATGTCACTTTAGAACGGTCCTTCAACGTGTCTACACCCTTTATTGATTC GAGGATCTCCTTCTTTATACGCCGGCAAGATTCAATGCTAAAGCCAGCACGCTCAGTGTC ATCCTCAGTCAAGCCCTCCTTGACGCAAATGAGGTTAAACTTGCGCTCAACTTCATGCAA AAGACCAACAACATCAAGCTTAAGGTTCTTCACTTTGGATATTTCCTTAAGGCGCTCCTC ACGATACTGCTCGCAGAGATGAATTAGCTGCTCAGTCTCACAACCCTGGGTAATAGCAAT ATGGCGCCTCAAACCAATGCTCAACTGCTGTATCATGGCCTCTTCTTCGTTGTCAATACG AGCTAACTCCTGAAGAATACGTTCCTCCTCACCTATGAGGGGCTTCAAGATGCGTAGCAC CTCCTCCGAGGTCCGATTTTTGGACCTGCCGTGGGTCTTAGGAGTAAAGGTACACTCAAT GAACTCCTCCATCTCGCGCTCCTCCTTAAGCTTTTGACGTAGACGCGCATCCTGCTCCTT TCTCAATTTCTGATGGAGGACCATATTGTGCCACTTCTCATCCCAAACCGATTCCGGCAT TTGCCCAGGCGAAGAGTGCGTACTCTCGCCGTCATAATGACGGCAGGGAGTGGAGCCGTT CATTGTATACCAATGACACACTGCAGCTGATATACAGTGGCACGTCAGGTACTACGCGAT TTACACAATAACGTTCTAGGGTTAAACTATATTACACCTTTCGAAAGAAAGGTTGATTAC GAAATATAGCGATCAATACTCACAGCCAGATTCAAAGTTCAGCGTAAGAGCACCTCTATG TCCTCGCCAGCTCGCGCCGGCACCGACATAACGCCTCCAATAA
  • Download Fasta

  • Fasta :-

    MEHHSDFNPYVNNGGTVVAAVWNNCAVIAADTRLSIGYAIHTRNVSKLKKLTQTCVIGTS GMQADMHALHSALERQIELYRFKHHREPGISVIAQLLSTILYSRRFFPYYTFNILCGVDE NGRGITCGFDAIGNYGFDAYMAKGTSSSLIMSILDNHLTSRNQQKHNEIQSLEELINVIK GAMTSAVERDIFTGDAAEVIVIDSMVHDPIRMPMRVD

  • title: active site
  • coordinates: G15,D31,R33,K47
No Results
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India