BBOV_II003000 | glycoprotease family protein

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_IDPredictionOTHERSPmTPCS_Position
BBOV_II003000OTHER0.9990950.0004230.000481
No Results

  • Fasta :-

    >BBOV_II003000 MSGKSLEDFFVLGIEGSANKLGIAVVRGDGVLLSNVRKTYSAPDGEGFLPRHVARHHREN LSAVLREALSTAGIKLSQISLICYTRGPGMGSGLHVGSIAAKTVHFLTGAPIVPVNHCVG HVEMGRHLSGYRLPVVLYVSGGNTQVISYDHVRCVYGVLGETLDVAAGNVLDRLARLLGL PNKPAPGYSIEVAARSGERLISLPFAVKGMDCSLSGLLTYCEQLIERERNLLSSGEITES DFSRFTCDLCFSVQEHMFAMLIEMTERAMSFVGANELLVVGGVGCNLRLQSMASAMAESR GARLYPMDERYCIDNGAMIAFAGLMDYLHGKGSEAAVPADKVSICQRYRTDQCVVTWI
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_II003000.fa Sequence name : BBOV_II003000 Sequence length : 358 VALUES OF COMPUTED PARAMETERS Coef20 : 3.413 CoefTot : -0.017 ChDiff : -2 ZoneTo : 6 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.076 1.412 0.168 0.582 MesoH : 0.185 0.579 -0.161 0.300 MuHd_075 : 13.388 9.946 2.798 2.430 MuHd_095 : 35.116 14.354 8.763 5.032 MuHd_100 : 31.466 9.915 8.314 4.292 MuHd_105 : 24.728 5.637 6.862 3.484 Hmax_075 : 7.350 10.150 -0.365 4.107 Hmax_095 : 14.962 11.988 2.307 4.935 Hmax_100 : 13.400 8.700 2.103 4.300 Hmax_105 : 13.883 10.267 2.186 4.877 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9170 0.0830 DFMC : 0.9376 0.0624
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 358 BBOV_II003000 MSGKSLEDFFVLGIEGSANKLGIAVVRGDGVLLSNVRKTYSAPDGEGFLPRHVARHHRENLSAVLREALSTAGIKLSQIS 80 LICYTRGPGMGSGLHVGSIAAKTVHFLTGAPIVPVNHCVGHVEMGRHLSGYRLPVVLYVSGGNTQVISYDHVRCVYGVLG 160 ETLDVAAGNVLDRLARLLGLPNKPAPGYSIEVAARSGERLISLPFAVKGMDCSLSGLLTYCEQLIERERNLLSSGEITES 240 DFSRFTCDLCFSVQEHMFAMLIEMTERAMSFVGANELLVVGGVGCNLRLQSMASAMAESRGARLYPMDERYCIDNGAMIA 320 FAGLMDYLHGKGSEAAVPADKVSICQRYRTDQCVVTWI 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ...................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_II003000 4 ---MSGK|SL 0.102 . BBOV_II003000 20 IEGSANK|LG 0.059 . BBOV_II003000 27 LGIAVVR|GD 0.118 . BBOV_II003000 37 VLLSNVR|KT 0.076 . BBOV_II003000 38 LLSNVRK|TY 0.102 . BBOV_II003000 51 GEGFLPR|HV 0.149 . BBOV_II003000 55 LPRHVAR|HH 0.163 . BBOV_II003000 58 HVARHHR|EN 0.227 . BBOV_II003000 66 NLSAVLR|EA 0.091 . BBOV_II003000 75 LSTAGIK|LS 0.059 . BBOV_II003000 86 SLICYTR|GP 0.095 . BBOV_II003000 102 VGSIAAK|TV 0.086 . BBOV_II003000 126 GHVEMGR|HL 0.099 . BBOV_II003000 132 RHLSGYR|LP 0.061 . BBOV_II003000 153 ISYDHVR|CV 0.171 . BBOV_II003000 173 AGNVLDR|LA 0.083 . BBOV_II003000 176 VLDRLAR|LL 0.158 . BBOV_II003000 183 LLGLPNK|PA 0.062 . BBOV_II003000 195 SIEVAAR|SG 0.136 . BBOV_II003000 199 AARSGER|LI 0.081 . BBOV_II003000 208 SLPFAVK|GM 0.066 . BBOV_II003000 227 CEQLIER|ER 0.063 . BBOV_II003000 229 QLIERER|NL 0.075 . BBOV_II003000 244 TESDFSR|FT 0.193 . BBOV_II003000 267 LIEMTER|AM 0.096 . BBOV_II003000 288 GVGCNLR|LQ 0.080 . BBOV_II003000 300 SAMAESR|GA 0.111 . BBOV_II003000 303 AESRGAR|LY 0.238 . BBOV_II003000 310 LYPMDER|YC 0.094 . BBOV_II003000 331 MDYLHGK|GS 0.085 . BBOV_II003000 341 AAVPADK|VS 0.056 . BBOV_II003000 347 KVSICQR|YR 0.113 . BBOV_II003000 349 SICQRYR|TD 0.086 . ____________________________^_________________

  • Fasta :-

    >BBOV_II003000 ATGTCTGGGAAGTCCTTAGAGGACTTCTTTGTTCTAGGTATTGAGGGTAGTGCCAACAAG TTAGGCATTGCTGTTGTTCGTGGTGATGGAGTACTACTATCCAATGTCCGGAAGACGTAT TCAGCTCCTGATGGTGAGGGCTTTCTTCCTAGACATGTAGCTCGTCACCATCGTGAGAAC CTATCTGCCGTGCTTCGGGAGGCACTGTCTACGGCTGGTATAAAACTATCGCAGATATCA TTGATATGTTATACTCGTGGACCTGGGATGGGTTCAGGTCTTCATGTTGGTTCCATTGCT GCTAAGACTGTCCACTTTCTGACTGGTGCTCCAATAGTCCCTGTGAATCATTGTGTTGGC CATGTGGAGATGGGTCGTCATCTAAGTGGCTATCGTTTACCGGTGGTGTTGTACGTTTCC GGTGGTAACACCCAGGTGATATCATATGACCATGTTCGTTGTGTTTACGGTGTTCTCGGT GAGACTTTGGACGTTGCTGCTGGTAATGTACTAGACCGTTTAGCTCGTCTTTTAGGGCTG CCTAACAAGCCTGCGCCAGGGTATTCCATAGAGGTTGCAGCTCGTTCCGGCGAGCGATTG ATTTCTTTACCGTTTGCAGTAAAGGGCATGGACTGCTCACTCAGTGGGTTGCTTACATAC TGTGAACAACTGATAGAGCGTGAGCGCAATTTACTATCGTCTGGTGAGATTACGGAATCT GATTTTTCTAGGTTTACCTGTGACCTATGCTTCAGTGTTCAGGAACACATGTTTGCGATG TTAATTGAGATGACTGAGCGTGCAATGTCCTTTGTGGGTGCTAATGAGCTATTGGTTGTT GGCGGTGTTGGTTGCAATTTACGTTTACAGTCGATGGCTAGTGCCATGGCTGAATCTCGT GGTGCTCGTCTTTATCCCATGGACGAGCGTTACTGCATTGACAACGGGGCCATGATAGCC TTTGCTGGGTTAATGGACTACCTCCATGGTAAAGGCTCAGAGGCGGCTGTACCCGCTGAC AAAGTCAGCATTTGCCAGCGTTATCGCACTGACCAGTGCGTAGTCACATGGATATGAAAT ATTAGCATTAGCT
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  • Fasta :-

    MSGKSLEDFFVLGIEGSANKLGIAVVRGDGVLLSNVRKTYSAPDGEGFLPRHVARHHREN LSAVLREALSTAGIKLSQISLICYTRGPGMGSGLHVGSIAAKTVHFLTGAPIVPVNHCVG HVEMGRHLSGYRLPVVLYVSGGNTQVISYDHVRCVYGVLGETLDVAAGNVLDRLARLLGL PNKPAPGYSIEVAARSGERLISLPFAVKGMDCSLSGLLTYCEQLIERERNLLSSGEITES DFSRFTCDLCFSVQEHMFAMLIEMTERAMSFVGANELLVVGGVGCNLRLQSMASAMAESR GARLYPMDERYCIDNGAMIAFAGLMDYLHGKGSEAAVPADKVSICQRYRTDQCVVTWI

    No Results
No Results
No Results
IDSitePeptideScoreMethod
BBOV_II0030005 SMSGKSLEDF0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India