BBOV_II004070 | ATP-dependent Clp protease proteolytic subunit 1, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
BBOV_II004070OTHER0.9991430.0001200.000737
No Results

  • Fasta :-

    >BBOV_II004070 MNPRHGWYHANMPNRPKILIQANNDAKDYKSNSDYLAKVDEFHIRTRTLFLSGELNDEKS YRLINQIFRMNEENPNENIKFYINSPGGSVSAGLAIYDILQSLKMRVETICIGQAASMGA FLLAAGAKGLRSAMPNSRIMIHQPLGGAHGEVTDIKIQANEILHIRQILNAHFSHFTGKS IEQVEQDCERDYYMRPSEAMEYGLIDRICTTRTSHIPIPTAPVIE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_II004070.fa Sequence name : BBOV_II004070 Sequence length : 225 VALUES OF COMPUTED PARAMETERS Coef20 : 3.300 CoefTot : -1.908 ChDiff : -1 ZoneTo : 24 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.682 1.606 0.320 0.626 MesoH : -0.092 0.485 -0.234 0.257 MuHd_075 : 14.240 6.231 2.975 3.064 MuHd_095 : 10.869 8.409 3.443 2.581 MuHd_100 : 20.088 7.559 3.683 4.191 MuHd_105 : 29.338 12.787 7.356 5.995 Hmax_075 : 5.133 1.633 -2.388 1.850 Hmax_095 : -2.200 0.900 -3.485 0.954 Hmax_100 : 2.900 2.700 -3.485 2.720 Hmax_105 : 6.900 3.400 -1.201 3.460 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9421 0.0579 DFMC : 0.9129 0.0871
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 225 BBOV_II004070 MNPRHGWYHANMPNRPKILIQANNDAKDYKSNSDYLAKVDEFHIRTRTLFLSGELNDEKSYRLINQIFRMNEENPNENIK 80 FYINSPGGSVSAGLAIYDILQSLKMRVETICIGQAASMGAFLLAAGAKGLRSAMPNSRIMIHQPLGGAHGEVTDIKIQAN 160 EILHIRQILNAHFSHFTGKSIEQVEQDCERDYYMRPSEAMEYGLIDRICTTRTSHIPIPTAPVIE 240 ................................................................................ 80 ................................................................................ 160 ................................................................. 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_II004070 4 ---MNPR|HG 0.086 . BBOV_II004070 15 HANMPNR|PK 0.114 . BBOV_II004070 17 NMPNRPK|IL 0.071 . BBOV_II004070 27 QANNDAK|DY 0.072 . BBOV_II004070 30 NDAKDYK|SN 0.117 . BBOV_II004070 38 NSDYLAK|VD 0.066 . BBOV_II004070 45 VDEFHIR|TR 0.087 . BBOV_II004070 47 EFHIRTR|TL 0.091 . BBOV_II004070 59 GELNDEK|SY 0.068 . BBOV_II004070 62 NDEKSYR|LI 0.146 . BBOV_II004070 69 LINQIFR|MN 0.099 . BBOV_II004070 80 NPNENIK|FY 0.079 . BBOV_II004070 104 DILQSLK|MR 0.053 . BBOV_II004070 106 LQSLKMR|VE 0.105 . BBOV_II004070 128 LLAAGAK|GL 0.081 . BBOV_II004070 131 AGAKGLR|SA 0.133 . BBOV_II004070 138 SAMPNSR|IM 0.090 . BBOV_II004070 156 GEVTDIK|IQ 0.065 . BBOV_II004070 166 NEILHIR|QI 0.092 . BBOV_II004070 179 FSHFTGK|SI 0.194 . BBOV_II004070 190 VEQDCER|DY 0.089 . BBOV_II004070 195 ERDYYMR|PS 0.119 . BBOV_II004070 207 EYGLIDR|IC 0.071 . BBOV_II004070 212 DRICTTR|TS 0.097 . ____________________________^_________________

  • Fasta :-

    >BBOV_II004070 ATGAATCCTCGTCATGGATGGTACCATGCTAATATGCCAAACCGTCCTAAAATTCTAATC CAAGCCAACAATGATGCAAAGGATTATAAATCTAACTCGGACTACCTGGCTAAAGTGGAT GAATTCCACATTCGAACACGAACGTTGTTCCTTAGTGGTGAACTCAATGATGAAAAATCA TACAGATTGATAAATCAGATATTTCGAATGAATGAAGAAAATCCCAATGAAAATATAAAA TTTTACATCAATTCGCCGGGAGGATCTGTGTCAGCAGGATTAGCAATATACGACATTTTA CAAAGTCTTAAAATGCGTGTAGAGACCATATGTATCGGACAAGCAGCATCTATGGGTGCG TTTCTGCTTGCTGCTGGAGCAAAGGGGTTGCGATCCGCAATGCCAAACTCACGTATCATG ATCCATCAACCATTGGGAGGTGCACATGGCGAAGTTACTGATATAAAAATACAGGCTAAT GAAATACTACACATTCGGCAAATATTGAATGCACATTTTTCGCACTTCACCGGAAAATCC ATAGAACAAGTGGAGCAAGATTGTGAACGAGATTACTATATGCGCCCGTCGGAAGCCATG GAATATGGTCTTATTGATCGAATATGTACTACACGAACATCACATATACCCATTCCGACA GCACCAGTCATTGAATAA
  • Download Fasta

  • Fasta :-

    MNPRHGWYHANMPNRPKILIQANNDAKDYKSNSDYLAKVDEFHIRTRTLFLSGELNDEKS YRLINQIFRMNEENPNENIKFYINSPGGSVSAGLAIYDILQSLKMRVETICIGQAASMGA FLLAAGAKGLRSAMPNSRIMIHQPLGGAHGEVTDIKIQANEILHIRQILNAHFSHFTGKS IEQVEQDCERDYYMRPSEAMEYGLIDRICTTRTSHIPIPTAPVIE

  • title: active site residues
  • coordinates: S117,H142,D191
No Results
No Results
IDSitePeptideScoreMethod
BBOV_II00407031 SKDYKSNSDY0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India