BBOV_II005380 | hypothetical protein

_IDPredictionOTHERSPmTPCS_Position
BBOV_II005380OTHER0.9974790.0016410.000879
No Results

  • Fasta :-

    >BBOV_II005380 MSTDNNKTFNVKWLRHFSRVTPFILYNDAKDSLLVCVANVLFLRRKIQVNQGTETITLQE IINLVAPLVKRVESEWTIETLRSMEKGTKIECPLNAMTVSINQDMMKLLGLLSINLFHGC IAGTRYKSIENFTFDDLRYHMMLHGRGQQMEGVRFEDAEATAADAFMKKYPNRVTEKGLQ MIKAEFRSQENCFHAVYHQNRFQTLTYNDENLYVLMADVIYKSHGCFWEQYDTPAYMDDR FKPYSLAADQVKVITPAGTPRGNEEGVKPIQSRPLEPKVQLVNEAKQLEKPKMEESPPVV PELRIDINEAGKSSSVMNNTAETGINKLDNKGNEEHEPLRIQQTVEENHVNQAGATLMKM MPELAAQNEPAKPNIPAHPGPAISLSIEQPEEPPKIPRRTNEFSQAGSASLLRKNKEQNG QKKSGKCGCQRLRLNDLMEALRGRR
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_II005380.fa Sequence name : BBOV_II005380 Sequence length : 445 VALUES OF COMPUTED PARAMETERS Coef20 : 4.354 CoefTot : -0.911 ChDiff : 2 ZoneTo : 27 KR : 4 DE : 1 CleavSite : 25 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.441 1.512 0.215 0.614 MesoH : -0.701 0.326 -0.426 0.176 MuHd_075 : 24.349 10.977 5.884 4.594 MuHd_095 : 41.025 15.745 8.371 8.643 MuHd_100 : 37.027 20.017 9.311 8.631 MuHd_105 : 35.780 22.391 9.622 8.436 Hmax_075 : 14.600 7.700 -0.051 4.300 Hmax_095 : 3.762 9.500 -0.204 5.260 Hmax_100 : 10.700 10.200 0.454 6.510 Hmax_105 : 16.800 17.600 3.192 5.752 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.3242 0.6758 DFMC : 0.6311 0.3689
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 445 BBOV_II005380 MSTDNNKTFNVKWLRHFSRVTPFILYNDAKDSLLVCVANVLFLRRKIQVNQGTETITLQEIINLVAPLVKRVESEWTIET 80 LRSMEKGTKIECPLNAMTVSINQDMMKLLGLLSINLFHGCIAGTRYKSIENFTFDDLRYHMMLHGRGQQMEGVRFEDAEA 160 TAADAFMKKYPNRVTEKGLQMIKAEFRSQENCFHAVYHQNRFQTLTYNDENLYVLMADVIYKSHGCFWEQYDTPAYMDDR 240 FKPYSLAADQVKVITPAGTPRGNEEGVKPIQSRPLEPKVQLVNEAKQLEKPKMEESPPVVPELRIDINEAGKSSSVMNNT 320 AETGINKLDNKGNEEHEPLRIQQTVEENHVNQAGATLMKMMPELAAQNEPAKPNIPAHPGPAISLSIEQPEEPPKIPRRT 400 NEFSQAGSASLLRKNKEQNGQKKSGKCGCQRLRLNDLMEALRGRR 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ............................................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_II005380 7 MSTDNNK|TF 0.057 . BBOV_II005380 12 NKTFNVK|WL 0.063 . BBOV_II005380 15 FNVKWLR|HF 0.103 . BBOV_II005380 19 WLRHFSR|VT 0.105 . BBOV_II005380 30 ILYNDAK|DS 0.069 . BBOV_II005380 44 ANVLFLR|RK 0.082 . BBOV_II005380 45 NVLFLRR|KI 0.122 . BBOV_II005380 46 VLFLRRK|IQ 0.072 . BBOV_II005380 70 LVAPLVK|RV 0.072 . BBOV_II005380 71 VAPLVKR|VE 0.117 . BBOV_II005380 82 WTIETLR|SM 0.137 . BBOV_II005380 86 TLRSMEK|GT 0.067 . BBOV_II005380 89 SMEKGTK|IE 0.061 . BBOV_II005380 107 INQDMMK|LL 0.067 . BBOV_II005380 125 GCIAGTR|YK 0.107 . BBOV_II005380 127 IAGTRYK|SI 0.091 . BBOV_II005380 138 FTFDDLR|YH 0.071 . BBOV_II005380 146 HMMLHGR|GQ 0.102 . BBOV_II005380 154 QQMEGVR|FE 0.094 . BBOV_II005380 168 AADAFMK|KY 0.060 . BBOV_II005380 169 ADAFMKK|YP 0.102 . BBOV_II005380 173 MKKYPNR|VT 0.186 . BBOV_II005380 177 PNRVTEK|GL 0.076 . BBOV_II005380 183 KGLQMIK|AE 0.058 . BBOV_II005380 187 MIKAEFR|SQ 0.160 . BBOV_II005380 201 AVYHQNR|FQ 0.096 . BBOV_II005380 222 MADVIYK|SH 0.085 . BBOV_II005380 240 PAYMDDR|FK 0.087 . BBOV_II005380 242 YMDDRFK|PY 0.069 . BBOV_II005380 252 LAADQVK|VI 0.075 . BBOV_II005380 261 TPAGTPR|GN 0.180 . BBOV_II005380 268 GNEEGVK|PI 0.060 . BBOV_II005380 273 VKPIQSR|PL 0.118 . BBOV_II005380 278 SRPLEPK|VQ 0.062 . BBOV_II005380 286 QLVNEAK|QL 0.073 . BBOV_II005380 290 EAKQLEK|PK 0.058 . BBOV_II005380 292 KQLEKPK|ME 0.064 . BBOV_II005380 304 PVVPELR|ID 0.071 . BBOV_II005380 312 DINEAGK|SS 0.088 . BBOV_II005380 327 AETGINK|LD 0.058 . BBOV_II005380 331 INKLDNK|GN 0.075 . BBOV_II005380 340 EEHEPLR|IQ 0.092 . BBOV_II005380 359 AGATLMK|MM 0.059 . BBOV_II005380 372 AQNEPAK|PN 0.078 . BBOV_II005380 395 QPEEPPK|IP 0.060 . BBOV_II005380 398 EPPKIPR|RT 0.080 . BBOV_II005380 399 PPKIPRR|TN 0.188 . BBOV_II005380 413 GSASLLR|KN 0.089 . BBOV_II005380 414 SASLLRK|NK 0.121 . BBOV_II005380 416 SLLRKNK|EQ 0.134 . BBOV_II005380 422 KEQNGQK|KS 0.071 . BBOV_II005380 423 EQNGQKK|SG 0.162 . BBOV_II005380 426 GQKKSGK|CG 0.075 . BBOV_II005380 431 GKCGCQR|LR 0.076 . BBOV_II005380 433 CGCQRLR|LN 0.078 . BBOV_II005380 442 DLMEALR|GR 0.074 . BBOV_II005380 444 MEALRGR|R- 0.090 . BBOV_II005380 445 EALRGRR|-- 0.281 . ____________________________^_________________

  • Fasta :-

    >BBOV_II005380 ATGTCGACCGATAACAACAAGACGTTTAACGTCAAGTGGCTGCGCCACTTTTCACGTGTA ACCCCCTTCATACTCTACAATGATGCGAAGGACTCTCTTCTTGTCTGTGTTGCGAATGTC TTGTTCCTTAGGCGCAAGATACAGGTTAACCAAGGCACAGAAACTATTACGTTGCAGGAA ATTATAAACCTAGTGGCACCATTGGTTAAACGCGTCGAATCTGAATGGACAATCGAGACT TTACGCAGTATGGAAAAGGGCACTAAAATTGAATGCCCTCTAAATGCTATGACTGTATCT ATAAATCAAGATATGATGAAATTGCTGGGCCTTTTGTCAATCAATTTGTTCCACGGTTGC ATTGCTGGTACTCGTTACAAGAGTATTGAGAACTTTACTTTCGACGACCTGCGCTACCAC ATGATGCTACACGGAAGAGGTCAGCAAATGGAAGGTGTTCGTTTTGAGGACGCTGAGGCT ACTGCTGCGGATGCGTTCATGAAGAAATACCCAAATAGAGTTACAGAGAAGGGATTACAA ATGATCAAGGCAGAGTTCCGCTCACAGGAAAATTGCTTCCACGCTGTATACCACCAAAAC CGCTTCCAAACATTGACGTACAATGATGAAAACTTGTATGTGCTCATGGCTGATGTTATA TACAAATCCCACGGTTGCTTCTGGGAGCAATACGACACTCCTGCATATATGGACGACAGG TTCAAACCATACTCGCTAGCTGCGGATCAGGTGAAAGTAATAACTCCAGCAGGTACGCCA AGGGGGAATGAAGAAGGTGTAAAACCCATTCAAAGTCGTCCCTTAGAGCCAAAGGTTCAA CTAGTTAACGAGGCAAAGCAACTGGAGAAACCCAAAATGGAGGAATCCCCTCCCGTGGTA CCCGAACTACGTATTGACATAAATGAAGCAGGAAAATCAAGTTCTGTGATGAACAATACT GCCGAAACTGGTATTAATAAATTAGACAACAAGGGCAATGAAGAGCATGAACCACTTAGG ATACAACAAACTGTTGAAGAAAATCACGTTAACCAGGCTGGAGCTACTCTCATGAAGATG ATGCCTGAATTAGCCGCTCAAAACGAGCCAGCAAAACCCAATATCCCAGCACACCCTGGG CCAGCCATATCCTTGTCCATAGAACAACCTGAAGAACCACCAAAGATACCACGGAGGACC AATGAATTTAGTCAAGCTGGATCCGCAAGTCTATTGCGTAAAAATAAAGAACAAAATGGA CAGAAAAAGAGTGGTAAATGTGGTTGCCAGCGATTGAGACTTAATGACCTTATGGAAGCC CTTCGTGGAAGACGGTAAAATAAAATCTAAATACTTATTGGAGGCAACATGGAATATTCC AATCTGTTAATACAACAGTGTAGTTGCCCATAAGTGGGATATCCATGGATATGACTAAAT ATGTCGATCGATGGGATAGTAAACACAAATGGAAACCATGATGCTACGCTACACCAACAC AGAGGGAATGTTGCCTCTATTAAAAGATATATGATCTCGAAAATGCAATCTCTTGAAATA TGTATTAACAAATTCGTGTGTTGAACAACTGGTTCATTGTCAGTTGGTGGAGTCAAACAC ATACTCCTTTACGTCCCCTAAAGTGTGCACATGTATCTATAATAATATAATCTTG
  • Download Fasta

  • Fasta :-

    MSTDNNKTFNVKWLRHFSRVTPFILYNDAKDSLLVCVANVLFLRRKIQVNQGTETITLQE IINLVAPLVKRVESEWTIETLRSMEKGTKIECPLNAMTVSINQDMMKLLGLLSINLFHGC IAGTRYKSIENFTFDDLRYHMMLHGRGQQMEGVRFEDAEATAADAFMKKYPNRVTEKGLQ MIKAEFRSQENCFHAVYHQNRFQTLTYNDENLYVLMADVIYKSHGCFWEQYDTPAYMDDR FKPYSLAADQVKVITPAGTPRGNEEGVKPIQSRPLEPKVQLVNEAKQLEKPKMEESPPVV PELRIDINEAGKSSSVMNNTAETGINKLDNKGNEEHEPLRIQQTVEENHVNQAGATLMKM MPELAAQNEPAKPNIPAHPGPAISLSIEQPEEPPKIPRRTNEFSQAGSASLLRKNKEQNG QKKSGKCGCQRLRLNDLMEALRGRR

    No Results
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IDSitePeptideScoreMethod
BBOV_II005380128 STRYKSIENF0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India