BBOV_II005540 | hypothetical protein

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  • Computed_GO_Function_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
BBOV_II005540OTHER0.9915980.0076790.000722
No Results

  • Fasta :-

    >BBOV_II005540 MGVDMDQTAVVLGHTFAMCDQNPGPKLRERLKDFILLTYRRGLSIHLPRFYAGNIPKRFY GIWPLWQQTDIKTDRGWGCALRATQMALAEALRDVLSPLDNVQEQRSRILQLFYDTTEAP FSLENLVMADVEHGANVVAWITVQKELSESQNECLKYLFTLPWFKGMVGAKKDKQRAYYF VGHHGNQALYLDPHEYCPVRNLLYVH
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_II005540.fa Sequence name : BBOV_II005540 Sequence length : 206 VALUES OF COMPUTED PARAMETERS Coef20 : 3.619 CoefTot : -0.250 ChDiff : 1 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.706 1.006 -0.107 0.460 MesoH : -0.980 0.086 -0.531 0.148 MuHd_075 : 6.041 6.661 2.489 2.015 MuHd_095 : 13.126 5.753 3.622 2.521 MuHd_100 : 15.732 6.649 4.544 2.807 MuHd_105 : 16.900 7.104 4.892 2.663 Hmax_075 : 10.733 12.900 1.105 4.750 Hmax_095 : 16.363 11.550 1.904 5.057 Hmax_100 : 17.300 11.400 1.909 5.160 Hmax_105 : 15.983 10.900 1.785 4.655 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9694 0.0306 DFMC : 0.9516 0.0484
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 206 BBOV_II005540 MGVDMDQTAVVLGHTFAMCDQNPGPKLRERLKDFILLTYRRGLSIHLPRFYAGNIPKRFYGIWPLWQQTDIKTDRGWGCA 80 LRATQMALAEALRDVLSPLDNVQEQRSRILQLFYDTTEAPFSLENLVMADVEHGANVVAWITVQKELSESQNECLKYLFT 160 LPWFKGMVGAKKDKQRAYYFVGHHGNQALYLDPHEYCPVRNLLYVH 240 ................................................................................ 80 ................................................................................ 160 .............................................. 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_II005540 26 DQNPGPK|LR 0.059 . BBOV_II005540 28 NPGPKLR|ER 0.084 . BBOV_II005540 30 GPKLRER|LK 0.107 . BBOV_II005540 32 KLRERLK|DF 0.063 . BBOV_II005540 40 FILLTYR|RG 0.058 . BBOV_II005540 41 ILLTYRR|GL 0.160 . BBOV_II005540 49 LSIHLPR|FY 0.112 . BBOV_II005540 57 YAGNIPK|RF 0.064 . BBOV_II005540 58 AGNIPKR|FY 0.276 . BBOV_II005540 72 WQQTDIK|TD 0.064 . BBOV_II005540 75 TDIKTDR|GW 0.169 . BBOV_II005540 82 GWGCALR|AT 0.096 . BBOV_II005540 93 ALAEALR|DV 0.113 . BBOV_II005540 106 DNVQEQR|SR 0.113 . BBOV_II005540 108 VQEQRSR|IL 0.077 . BBOV_II005540 145 AWITVQK|EL 0.073 . BBOV_II005540 156 SQNECLK|YL 0.069 . BBOV_II005540 165 FTLPWFK|GM 0.057 . BBOV_II005540 171 KGMVGAK|KD 0.061 . BBOV_II005540 172 GMVGAKK|DK 0.114 . BBOV_II005540 174 VGAKKDK|QR 0.064 . BBOV_II005540 176 AKKDKQR|AY 0.155 . BBOV_II005540 200 HEYCPVR|NL 0.083 . ____________________________^_________________

  • Fasta :-

    >BBOV_II005540 ATGGGTGTTGATATGGATCAGACGGCAGTGGTTCTAGGTCACACATTTGCGATGTGTGAC CAGAACCCTGGTCCTAAGCTTAGAGAACGCTTAAAAGATTTTATACTCTTGACTTATCGC CGTGGACTCAGTATACATCTACCTAGATTCTATGCTGGTAACATACCCAAACGATTTTAC GGGATATGGCCACTATGGCAGCAAACTGATATAAAAACGGATCGAGGTTGGGGTTGTGCT CTAAGAGCTACCCAAATGGCATTGGCAGAAGCTTTGCGTGATGTATTATCACCATTAGAC AATGTACAAGAACAGCGATCAAGGATTCTACAACTATTCTACGATACAACAGAAGCGCCA TTCTCTCTAGAAAATCTAGTAATGGCCGACGTTGAACACGGAGCAAATGTTGTTGCCTGG ATAACTGTGCAAAAGGAACTCTCAGAATCGCAAAATGAATGCCTTAAATACCTATTCACC TTACCATGGTTCAAGGGCATGGTAGGAGCAAAGAAAGACAAACAAAGAGCTTACTACTTT GTCGGCCACCACGGCAATCAAGCACTGTATTTAGATCCACATGAATACTGCCCGGTGAGA AACTTGTTATATGTACATTAA
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  • Fasta :-

    MGVDMDQTAVVLGHTFAMCDQNPGPKLRERLKDFILLTYRRGLSIHLPRFYAGNIPKRFY GIWPLWQQTDIKTDRGWGCALRATQMALAEALRDVLSPLDNVQEQRSRILQLFYDTTEAP FSLENLVMADVEHGANVVAWITVQKELSESQNECLKYLFTLPWFKGMVGAKKDKQRAYYF VGHHGNQALYLDPHEYCPVRNLLYVH

    No Results
No Results
No Results
IDSitePeptideScoreMethod
BBOV_II005540122 SEAPFSLENL0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India