BBOV_II005970 | proteosome A, putative

_IDPredictionOTHERSPmTPCS_Position
BBOV_II005970OTHER0.9999860.0000130.000001
No Results

  • Fasta :-

    >BBOV_II005970 MMVDCSYYDGISEAGIAQECVSGSTAADDRAHDISMGTTIIAMIYRDGILLAADSRTSSG PIVVNRVARKITRILPNVFMLRSGSAADSQMLSVIVRYHAQALCLQLRKSGRASGDDAIG SDDAMQIDSEMPTESEYSYRFDESMVYPPLKALATATHKIVHEYREQLYCGIILGGYDMQ HGPEIYNVTLGGTLLKVPHFVASGSGSGYITAFLHDNYEPDMSRDQCLSLLKRAIKYAID IDNSSGGLMRAVSVSRTGVSEFCFTF
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_II005970.fa Sequence name : BBOV_II005970 Sequence length : 266 VALUES OF COMPUTED PARAMETERS Coef20 : 3.316 CoefTot : 0.000 ChDiff : -8 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.247 1.265 0.048 0.475 MesoH : -0.287 0.504 -0.290 0.257 MuHd_075 : 38.597 20.317 9.872 6.029 MuHd_095 : 7.851 1.475 1.266 1.633 MuHd_100 : 0.734 2.296 0.920 0.808 MuHd_105 : 3.458 2.058 1.326 0.965 Hmax_075 : 13.700 14.800 3.633 5.240 Hmax_095 : 6.562 5.600 0.265 3.490 Hmax_100 : 5.100 7.100 0.265 3.630 Hmax_105 : 1.050 7.100 0.760 3.580 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9724 0.0276 DFMC : 0.9124 0.0876
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 266 BBOV_II005970 MMVDCSYYDGISEAGIAQECVSGSTAADDRAHDISMGTTIIAMIYRDGILLAADSRTSSGPIVVNRVARKITRILPNVFM 80 LRSGSAADSQMLSVIVRYHAQALCLQLRKSGRASGDDAIGSDDAMQIDSEMPTESEYSYRFDESMVYPPLKALATATHKI 160 VHEYREQLYCGIILGGYDMQHGPEIYNVTLGGTLLKVPHFVASGSGSGYITAFLHDNYEPDMSRDQCLSLLKRAIKYAID 240 IDNSSGGLMRAVSVSRTGVSEFCFTF 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .......................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_II005970 30 STAADDR|AH 0.111 . BBOV_II005970 46 IIAMIYR|DG 0.089 . BBOV_II005970 56 LLAADSR|TS 0.078 . BBOV_II005970 66 GPIVVNR|VA 0.158 . BBOV_II005970 69 VVNRVAR|KI 0.458 . BBOV_II005970 70 VNRVARK|IT 0.096 . BBOV_II005970 73 VARKITR|IL 0.092 . BBOV_II005970 82 PNVFMLR|SG 0.141 . BBOV_II005970 97 MLSVIVR|YH 0.131 . BBOV_II005970 108 ALCLQLR|KS 0.089 . BBOV_II005970 109 LCLQLRK|SG 0.098 . BBOV_II005970 112 QLRKSGR|AS 0.138 . BBOV_II005970 140 ESEYSYR|FD 0.108 . BBOV_II005970 151 MVYPPLK|AL 0.076 . BBOV_II005970 159 LATATHK|IV 0.076 . BBOV_II005970 165 KIVHEYR|EQ 0.081 . BBOV_II005970 196 LGGTLLK|VP 0.057 . BBOV_II005970 224 YEPDMSR|DQ 0.077 . BBOV_II005970 232 QCLSLLK|RA 0.056 . BBOV_II005970 233 CLSLLKR|AI 0.231 . BBOV_II005970 236 LLKRAIK|YA 0.214 . BBOV_II005970 250 SSGGLMR|AV 0.218 . BBOV_II005970 256 RAVSVSR|TG 0.073 . ____________________________^_________________

  • Fasta :-

    >BBOV_II005970 ATGATGGTAGATTGTAGTTATTATGATGGCATTTCGGAAGCCGGAATCGCACAGGAGTGT GTGTCTGGCTCCACCGCGGCTGACGATCGTGCTCATGACATAAGCATGGGTACGACTATT ATCGCGATGATTTATCGTGATGGTATACTTTTGGCTGCGGATAGTCGTACATCATCTGGT CCTATTGTTGTAAATCGTGTGGCTCGCAAGATTACTCGCATTCTTCCAAATGTTTTTATG CTACGTTCCGGTTCAGCTGCCGATTCGCAGATGCTATCTGTTATAGTACGTTATCATGCA CAGGCTTTATGTCTACAATTGCGCAAGAGCGGACGTGCGTCTGGTGATGATGCTATTGGT AGTGACGATGCGATGCAGATTGACAGCGAAATGCCTACTGAGAGTGAATATAGTTACAGA TTCGACGAGAGTATGGTTTACCCTCCTCTTAAAGCACTGGCTACTGCGACACACAAGATT GTACATGAGTACCGTGAGCAGCTGTACTGTGGTATAATATTGGGAGGTTATGATATGCAA CACGGTCCCGAGATATACAATGTGACATTGGGTGGCACCCTGTTGAAAGTACCACACTTT GTGGCTAGTGGATCGGGTTCAGGATACATTACAGCATTTTTACACGACAACTACGAGCCT GACATGTCTCGCGATCAGTGTTTGTCACTGCTAAAGAGGGCTATCAAGTACGCGATTGAC ATCGATAATAGTTCAGGCGGTCTAATGCGTGCGGTATCTGTTTCTCGTACCGGCGTGTCT GAGTTTTGCTTCACTTTCTAG
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  • Fasta :-

    MMVDCSYYDGISEAGIAQECVSGSTAADDRAHDISMGTTIIAMIYRDGILLAADSRTSSG PIVVNRVARKITRILPNVFMLRSGSAADSQMLSVIVRYHAQALCLQLRKSGRASGDDAIG SDDAMQIDSEMPTESEYSYRFDESMVYPPLKALATATHKIVHEYREQLYCGIILGGYDMQ HGPEIYNVTLGGTLLKVPHFVASGSGSGYITAFLHDNYEPDMSRDQCLSLLKRAIKYAID IDNSSGGLMRAVSVSRTGVSEFCFTF

  • title: active site
  • coordinates: T38,D54,R56,K70
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
BBOV_II005970114 SSGRASGDDA0.998unspBBOV_II005970114 SSGRASGDDA0.998unspBBOV_II005970114 SSGRASGDDA0.998unspBBOV_II005970138 SESEYSYRFD0.993unspBBOV_II005970253 SMRAVSVSRT0.993unspBBOV_II00597058 SDSRTSSGPI0.993unspBBOV_II005970110 SQLRKSGRAS0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India