BBOV_II007340 | erythrocyte membrane-associated antigen

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_IDPredictionOTHERSPmTPCS_Position
BBOV_II007340SP0.0002970.9997030.000001CS pos: 24-25. VNG-VT. Pr: 0.7734
No Results

  • Fasta :-

    >BBOV_II007340 MCSRRHSCAMLLFLLAFCNSVVNGVTDDLVRLDPGVSKGESIVLDYEANRGYSFLAKIGN QDISLRVVSSLEGLILLCQDTSACSNINLGGICYDPKLSTSAIWCKNSDACIPGEDGYRC VEQSSHEGLQPVTTLDFYSEGIRHRVDTFEGYENVSLRNVGLLVPPIYERVPIKLATNMV VNNSLEFGRDIGGFFGIIGSSASCRGNSMWSDILQRYDGFYMLDLYGDVDTSTVNCIKLG SDVAKRDDILWSEKRQVGGIFTDSATGFTVYGMSMCGTDMFGKTSSNWHVNIDLTSQCLV LPKNFWFSVMAQLPILNSCYRMDGPKLCQLKRGDIEFLPEIQFRLHSQDDSIISIPLENL LLDDTATPRLCIVPQEDTYSPPIFTDRPTIKFGYKVLESLQVVVDTNGYRVGFLPKKPAD TSDAICNPRVDCFGDQQYIPELNECIQPSCSTGVNEIAISDHTSGNSGIYCRETANSP
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_II007340.fa Sequence name : BBOV_II007340 Sequence length : 478 VALUES OF COMPUTED PARAMETERS Coef20 : 5.086 CoefTot : 0.619 ChDiff : -19 ZoneTo : 26 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.635 1.953 0.302 0.648 MesoH : 0.040 0.537 -0.244 0.247 MuHd_075 : 26.996 16.514 8.632 5.917 MuHd_095 : 21.437 18.178 6.230 4.782 MuHd_100 : 23.929 18.631 6.745 5.054 MuHd_105 : 20.493 19.852 9.356 3.918 Hmax_075 : 15.400 21.700 5.825 5.763 Hmax_095 : 14.175 23.100 4.884 5.130 Hmax_100 : 17.900 26.500 6.083 5.250 Hmax_105 : 18.550 25.375 7.350 6.557 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6472 0.3528 DFMC : 0.5355 0.4645
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 478 BBOV_II007340 MCSRRHSCAMLLFLLAFCNSVVNGVTDDLVRLDPGVSKGESIVLDYEANRGYSFLAKIGNQDISLRVVSSLEGLILLCQD 80 TSACSNINLGGICYDPKLSTSAIWCKNSDACIPGEDGYRCVEQSSHEGLQPVTTLDFYSEGIRHRVDTFEGYENVSLRNV 160 GLLVPPIYERVPIKLATNMVVNNSLEFGRDIGGFFGIIGSSASCRGNSMWSDILQRYDGFYMLDLYGDVDTSTVNCIKLG 240 SDVAKRDDILWSEKRQVGGIFTDSATGFTVYGMSMCGTDMFGKTSSNWHVNIDLTSQCLVLPKNFWFSVMAQLPILNSCY 320 RMDGPKLCQLKRGDIEFLPEIQFRLHSQDDSIISIPLENLLLDDTATPRLCIVPQEDTYSPPIFTDRPTIKFGYKVLESL 400 QVVVDTNGYRVGFLPKKPADTSDAICNPRVDCFGDQQYIPELNECIQPSCSTGVNEIAISDHTSGNSGIYCRETANSP 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .............................................................................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_II007340 4 ---MCSR|RH 0.078 . BBOV_II007340 5 --MCSRR|HS 0.213 . BBOV_II007340 31 VTDDLVR|LD 0.066 . BBOV_II007340 38 LDPGVSK|GE 0.074 . BBOV_II007340 50 LDYEANR|GY 0.083 . BBOV_II007340 57 GYSFLAK|IG 0.069 . BBOV_II007340 66 NQDISLR|VV 0.116 . BBOV_II007340 97 GICYDPK|LS 0.064 . BBOV_II007340 106 TSAIWCK|NS 0.086 . BBOV_II007340 119 PGEDGYR|CV 0.114 . BBOV_II007340 143 FYSEGIR|HR 0.076 . BBOV_II007340 145 SEGIRHR|VD 0.082 . BBOV_II007340 158 YENVSLR|NV 0.156 . BBOV_II007340 170 VPPIYER|VP 0.067 . BBOV_II007340 174 YERVPIK|LA 0.071 . BBOV_II007340 189 NSLEFGR|DI 0.161 . BBOV_II007340 205 GSSASCR|GN 0.155 . BBOV_II007340 216 WSDILQR|YD 0.096 . BBOV_II007340 238 STVNCIK|LG 0.062 . BBOV_II007340 245 LGSDVAK|RD 0.076 . BBOV_II007340 246 GSDVAKR|DD 0.139 . BBOV_II007340 254 DILWSEK|RQ 0.056 . BBOV_II007340 255 ILWSEKR|QV 0.412 . BBOV_II007340 283 GTDMFGK|TS 0.061 . BBOV_II007340 303 QCLVLPK|NF 0.061 . BBOV_II007340 321 ILNSCYR|MD 0.145 . BBOV_II007340 326 YRMDGPK|LC 0.062 . BBOV_II007340 331 PKLCQLK|RG 0.059 . BBOV_II007340 332 KLCQLKR|GD 0.200 . BBOV_II007340 344 LPEIQFR|LH 0.103 . BBOV_II007340 369 DDTATPR|LC 0.072 . BBOV_II007340 387 PPIFTDR|PT 0.098 . BBOV_II007340 391 TDRPTIK|FG 0.095 . BBOV_II007340 395 TIKFGYK|VL 0.065 . BBOV_II007340 410 VDTNGYR|VG 0.060 . BBOV_II007340 416 RVGFLPK|KP 0.058 . BBOV_II007340 417 VGFLPKK|PA 0.109 . BBOV_II007340 429 DAICNPR|VD 0.083 . BBOV_II007340 472 NSGIYCR|ET 0.089 . ____________________________^_________________

  • Fasta :-

    >BBOV_II007340 ATGTGCAGCAGGCGCCATTCTTGCGCCATGTTGCTGTTTCTATTAGCTTTTTGCAATAGT GTTGTCAATGGAGTTACAGATGATTTAGTGCGATTGGATCCCGGTGTGTCTAAGGGTGAA AGCATAGTGTTGGATTACGAGGCTAATCGTGGTTACAGCTTCTTGGCAAAGATTGGTAAT CAGGACATATCACTTCGGGTGGTATCAAGTCTAGAGGGTTTGATCCTATTATGTCAAGAC ACTTCAGCTTGTTCCAATATTAATTTGGGTGGTATTTGTTACGATCCCAAGCTTTCCACT AGTGCCATTTGGTGTAAGAATTCGGATGCTTGCATTCCGGGTGAGGATGGCTACCGCTGT GTTGAGCAGTCATCTCATGAGGGTTTGCAGCCAGTGACTACTTTGGACTTTTACAGTGAG GGCATAAGACACCGTGTCGATACCTTTGAGGGCTATGAAAACGTATCCCTGCGTAATGTT GGCTTATTGGTCCCGCCTATATATGAGCGGGTTCCCATAAAGCTGGCTACCAACATGGTA GTGAACAACAGTTTGGAATTTGGTCGTGACATTGGTGGTTTCTTTGGCATTATAGGTTCT TCAGCGAGTTGCCGTGGCAATTCAATGTGGTCTGACATTTTGCAGCGTTATGATGGTTTT TATATGCTAGACCTCTATGGTGACGTTGATACATCCACTGTAAATTGCATTAAGCTGGGC TCTGATGTTGCTAAGCGCGATGACATTCTATGGTCTGAGAAACGCCAGGTGGGTGGCATA TTCACTGACTCCGCAACTGGCTTTACTGTTTATGGAATGTCGATGTGCGGCACTGACATG TTTGGCAAAACTTCTTCTAACTGGCACGTCAATATAGACTTGACGTCGCAATGCTTGGTG TTACCTAAAAACTTCTGGTTTAGTGTTATGGCTCAGTTACCTATACTCAACAGTTGCTAC CGCATGGATGGTCCTAAACTATGTCAACTAAAGCGTGGCGATATAGAATTCTTACCTGAA ATCCAATTCAGACTACATTCACAGGATGACAGTATTATCAGTATACCTCTGGAGAACCTA TTACTCGACGATACTGCCACACCTCGGCTTTGTATAGTACCTCAGGAAGACACGTATTCA CCTCCTATTTTCACGGATAGGCCTACTATCAAGTTTGGTTACAAGGTCCTGGAGTCGCTG CAGGTGGTGGTGGACACCAATGGGTACCGTGTAGGCTTCTTGCCTAAGAAGCCTGCGGAT ACCAGTGATGCCATATGCAACCCACGTGTTGATTGCTTCGGTGATCAGCAGTACATTCCG GAACTCAACGAGTGCATCCAGCCTTCATGCAGCACTGGAGTGAATGAAATAGCAATATCA GATCACACATCAGGGAATAGCGGCATATACTGCCGTGAAACAGCCAATTCCCCTTGA
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  • Fasta :-

    MCSRRHSCAMLLFLLAFCNSVVNGVTDDLVRLDPGVSKGESIVLDYEANRGYSFLAKIGN QDISLRVVSSLEGLILLCQDTSACSNINLGGICYDPKLSTSAIWCKNSDACIPGEDGYRC VEQSSHEGLQPVTTLDFYSEGIRHRVDTFEGYENVSLRNVGLLVPPIYERVPIKLATNMV VNNSLEFGRDIGGFFGIIGSSASCRGNSMWSDILQRYDGFYMLDLYGDVDTSTVNCIKLG SDVAKRDDILWSEKRQVGGIFTDSATGFTVYGMSMCGTDMFGKTSSNWHVNIDLTSQCLV LPKNFWFSVMAQLPILNSCYRMDGPKLCQLKRGDIEFLPEIQFRLHSQDDSIISIPLENL LLDDTATPRLCIVPQEDTYSPPIFTDRPTIKFGYKVLESLQVVVDTNGYRVGFLPKKPAD TSDAICNPRVDCFGDQQYIPELNECIQPSCSTGVNEIAISDHTSGNSGIYCRETANSP

    No Results
No Results
No Results
IDSitePeptideScoreMethod
BBOV_II007340347 SFRLHSQDDS0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India