BBOV_II007410 | erythrocyte membrane-associated antigen

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_IDPredictionOTHERSPmTPCS_Position
BBOV_II007410SP0.0039910.9960050.000003CS pos: 17-18. VLT-DD. Pr: 0.8774
No Results

  • Fasta :-

    >BBOV_II007410 MLLFLLAFCNSIVNVLTDDLVRLDPGVSKGESIVLDYEANRGYSFVARIGNQDISLRVVS SLEGLILLCQDTSACSHINLGGICYDPKLSTSAIWCKNSDACIPGADGYRCVEQSSHEGL QPVTTLDFYSEGIRHRVDTFEGYENVSLRNVGLLVPPIYERVPIKLATNMVVNNSLEFGR DIGGFFGIIGSSASCRGNSMWSDILQRYDGFYMLDLYGDIGSSRDVASAVNCIKLGSDVA KSDDILWSEKRQVGGIFTDAATGFTVYGMSMCGTDMFGKTSSNWHVNIDLTSQCLVLPKN FWFSVMAQLPILNSCYRMDGPKLCQLKRGDIEFLPEIQFRLHSQDDSIISIPLENLLLDD TATPRICIVPQEDTYSPPIFTDRPTIKFGYKVLESLQVVVDTNGYRVGFLPKKPADTSDA ICNPRVECFGDQQYIPELNECIQPSCSIWSFKRLDADKGYVLIYEIKTQS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_II007410.fa Sequence name : BBOV_II007410 Sequence length : 470 VALUES OF COMPUTED PARAMETERS Coef20 : 4.483 CoefTot : 0.595 ChDiff : -17 ZoneTo : 17 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.700 2.071 0.260 0.662 MesoH : 0.055 0.522 -0.240 0.251 MuHd_075 : 17.159 12.443 3.878 3.761 MuHd_095 : 28.750 20.554 8.534 5.730 MuHd_100 : 26.018 23.099 8.900 5.862 MuHd_105 : 18.752 22.605 8.346 5.215 Hmax_075 : 18.000 20.200 3.549 6.470 Hmax_095 : 22.100 23.800 5.017 7.740 Hmax_100 : 22.100 26.400 5.990 7.740 Hmax_105 : 20.400 26.400 6.262 7.290 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9220 0.0780 DFMC : 0.9278 0.0722
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 470 BBOV_II007410 MLLFLLAFCNSIVNVLTDDLVRLDPGVSKGESIVLDYEANRGYSFVARIGNQDISLRVVSSLEGLILLCQDTSACSHINL 80 GGICYDPKLSTSAIWCKNSDACIPGADGYRCVEQSSHEGLQPVTTLDFYSEGIRHRVDTFEGYENVSLRNVGLLVPPIYE 160 RVPIKLATNMVVNNSLEFGRDIGGFFGIIGSSASCRGNSMWSDILQRYDGFYMLDLYGDIGSSRDVASAVNCIKLGSDVA 240 KSDDILWSEKRQVGGIFTDAATGFTVYGMSMCGTDMFGKTSSNWHVNIDLTSQCLVLPKNFWFSVMAQLPILNSCYRMDG 320 PKLCQLKRGDIEFLPEIQFRLHSQDDSIISIPLENLLLDDTATPRICIVPQEDTYSPPIFTDRPTIKFGYKVLESLQVVV 400 DTNGYRVGFLPKKPADTSDAICNPRVECFGDQQYIPELNECIQPSCSIWSFKRLDADKGYVLIYEIKTQS 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ...................................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_II007410 22 LTDDLVR|LD 0.067 . BBOV_II007410 29 LDPGVSK|GE 0.074 . BBOV_II007410 41 LDYEANR|GY 0.094 . BBOV_II007410 48 GYSFVAR|IG 0.110 . BBOV_II007410 57 NQDISLR|VV 0.114 . BBOV_II007410 88 GICYDPK|LS 0.064 . BBOV_II007410 97 TSAIWCK|NS 0.084 . BBOV_II007410 110 PGADGYR|CV 0.148 . BBOV_II007410 134 FYSEGIR|HR 0.076 . BBOV_II007410 136 SEGIRHR|VD 0.082 . BBOV_II007410 149 YENVSLR|NV 0.156 . BBOV_II007410 161 VPPIYER|VP 0.067 . BBOV_II007410 165 YERVPIK|LA 0.071 . BBOV_II007410 180 NSLEFGR|DI 0.161 . BBOV_II007410 196 GSSASCR|GN 0.155 . BBOV_II007410 207 WSDILQR|YD 0.096 . BBOV_II007410 224 GDIGSSR|DV 0.154 . BBOV_II007410 234 SAVNCIK|LG 0.067 . BBOV_II007410 241 LGSDVAK|SD 0.117 . BBOV_II007410 250 DILWSEK|RQ 0.056 . BBOV_II007410 251 ILWSEKR|QV 0.410 . BBOV_II007410 279 GTDMFGK|TS 0.061 . BBOV_II007410 299 QCLVLPK|NF 0.061 . BBOV_II007410 317 ILNSCYR|MD 0.145 . BBOV_II007410 322 YRMDGPK|LC 0.062 . BBOV_II007410 327 PKLCQLK|RG 0.059 . BBOV_II007410 328 KLCQLKR|GD 0.200 . BBOV_II007410 340 LPEIQFR|LH 0.103 . BBOV_II007410 365 DDTATPR|IC 0.075 . BBOV_II007410 383 PPIFTDR|PT 0.098 . BBOV_II007410 387 TDRPTIK|FG 0.095 . BBOV_II007410 391 TIKFGYK|VL 0.065 . BBOV_II007410 406 VDTNGYR|VG 0.060 . BBOV_II007410 412 RVGFLPK|KP 0.058 . BBOV_II007410 413 VGFLPKK|PA 0.109 . BBOV_II007410 425 DAICNPR|VE 0.079 . BBOV_II007410 452 CSIWSFK|RL 0.073 . BBOV_II007410 453 SIWSFKR|LD 0.162 . BBOV_II007410 458 KRLDADK|GY 0.062 . BBOV_II007410 467 VLIYEIK|TQ 0.062 . ____________________________^_________________

  • Fasta :-

    >BBOV_II007410 ATGTTGCTGTTTCTATTAGCTTTTTGCAATAGTATCGTCAATGTGCTTACAGATGATTTA GTGCGATTGGATCCCGGTGTGTCTAAGGGTGAAAGCATAGTGTTGGATTACGAGGCTAAT CGTGGTTACAGCTTCGTGGCTAGAATTGGCAATCAGGACATATCACTTCGGGTGGTATCA AGTCTAGAGGGCTTGATTCTATTATGTCAAGACACTTCAGCTTGTTCCCATATTAATCTA GGTGGCATTTGTTACGATCCCAAGCTTTCCACTAGTGCCATTTGGTGTAAGAATTCGGAC GCTTGCATTCCGGGTGCGGATGGCTATCGCTGTGTTGAGCAGTCATCTCATGAGGGTTTA CAGCCAGTGACTACTTTGGACTTTTACAGTGAGGGCATAAGACACCGTGTCGATACCTTT GAGGGCTATGAAAACGTATCCCTGCGTAATGTTGGTTTATTGGTCCCGCCTATATATGAG CGTGTTCCAATAAAACTGGCTACCAACATGGTAGTTAACAACAGTTTGGAATTTGGTCGT GACATTGGTGGTTTCTTTGGCATTATAGGTTCTTCAGCCAGTTGCCGGGGCAATTCAATG TGGTCTGACATTTTGCAGCGTTATGATGGTTTCTACATGCTAGACCTCTATGGTGACATT GGGTCGTCCAGGGATGTTGCTTCTGCTGTAAATTGCATTAAGCTGGGCTCTGACGTTGCG AAGAGCGATGACATTCTATGGTCTGAGAAACGCCAGGTGGGTGGCATATTCACTGACGCT GCAACTGGCTTTACTGTTTATGGCATGTCTATGTGTGGCACTGACATGTTTGGCAAAACT TCTTCTAACTGGCACGTCAATATAGACTTGACATCGCAATGCTTGGTGTTACCTAAAAAC TTTTGGTTTAGTGTTATGGCTCAGTTACCTATACTCAACAGTTGCTACCGCATGGATGGT CCTAAATTATGTCAACTAAAGCGTGGCGATATAGAATTCTTACCTGAAATCCAATTTAGG TTACATTCACAGGATGACAGTATTATCAGTATACCTCTGGAGAACCTATTACTTGACGAT ACTGCCACACCTAGGATTTGTATAGTACCTCAGGAAGACACGTATTCACCTCCTATTTTT ACGGATCGCCCTACTATCAAGTTTGGTTACAAGGTCCTGGAGTCGCTGCAGGTGGTGGTG GACACCAATGGGTACCGTGTAGGCTTCTTGCCTAAGAAGCCTGCGGATACCAGTGATGCC ATATGCAACCCACGTGTTGAGTGCTTCGGTGATCAGCAGTACATTCCGGAACTCAACGAG TGCATCCAGCCGTCATGCAGCATCTGGAGCTTCAAACGCCTGGATGCCGACAAGGGGTAT GTGCTAATCTATGAAATTAAAACACAGTCTTAG
  • Download Fasta

  • Fasta :-

    MLLFLLAFCNSIVNVLTDDLVRLDPGVSKGESIVLDYEANRGYSFVARIGNQDISLRVVS SLEGLILLCQDTSACSHINLGGICYDPKLSTSAIWCKNSDACIPGADGYRCVEQSSHEGL QPVTTLDFYSEGIRHRVDTFEGYENVSLRNVGLLVPPIYERVPIKLATNMVVNNSLEFGR DIGGFFGIIGSSASCRGNSMWSDILQRYDGFYMLDLYGDIGSSRDVASAVNCIKLGSDVA KSDDILWSEKRQVGGIFTDAATGFTVYGMSMCGTDMFGKTSSNWHVNIDLTSQCLVLPKN FWFSVMAQLPILNSCYRMDGPKLCQLKRGDIEFLPEIQFRLHSQDDSIISIPLENLLLDD TATPRICIVPQEDTYSPPIFTDRPTIKFGYKVLESLQVVVDTNGYRVGFLPKKPADTSDA ICNPRVECFGDQQYIPELNECIQPSCSIWSFKRLDADKGYVLIYEIKTQS

    No Results
No Results
No Results
IDSitePeptideScoreMethod
BBOV_II007410343 SFRLHSQDDS0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India