BBOV_II007480 | 26S proteasome regulatory subunit, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005515      

  • Computed_GO_Functions:  protein binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
BBOV_II007480OTHER0.9982810.0011330.000586
No Results

  • Fasta :-

    >BBOV_II007480 MGDPGMSYQNMLNSFGGTRHAQGFGPIADTAEQVYISSLALLKMLKHGRAGVPMEVMGLM LGEFIDDYTIVVVDVFSMPQSGNSVSVEAVDPVYQTEMKDKLKLTGRPEVVVGWYHSHPG FGCWFSGTDINTQQSFEQLNPRAVGIVIDPIQSVKGKVVIDCFRLITPHLIMLGQEPRQT TSNIGHLSKPTMIAVVHGLNRNYYNIVINYRKSVLETQMLMNYHRNKWTDNLQVRDFVTR RRENRETVGNIKDLIDKYNDSIKQELTSTADELAVANVGKLNAKAHIDNHVSRLLKDNSL DTFGTMLAVEMF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_II007480.fa Sequence name : BBOV_II007480 Sequence length : 312 VALUES OF COMPUTED PARAMETERS Coef20 : 3.033 CoefTot : -2.455 ChDiff : -2 ZoneTo : 28 KR : 1 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.076 1.565 0.058 0.554 MesoH : -0.233 0.520 -0.305 0.294 MuHd_075 : 28.313 18.799 7.418 6.270 MuHd_095 : 12.458 11.575 4.035 3.516 MuHd_100 : 21.412 14.009 5.630 4.708 MuHd_105 : 26.094 15.506 8.013 5.130 Hmax_075 : 15.283 7.800 1.279 3.780 Hmax_095 : 13.400 5.338 0.669 4.440 Hmax_100 : 13.600 7.100 0.669 4.440 Hmax_105 : 10.500 5.367 0.426 3.372 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9802 0.0198 DFMC : 0.9742 0.0258
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 312 BBOV_II007480 MGDPGMSYQNMLNSFGGTRHAQGFGPIADTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFIDDYTIVVVDVFSMPQ 80 SGNSVSVEAVDPVYQTEMKDKLKLTGRPEVVVGWYHSHPGFGCWFSGTDINTQQSFEQLNPRAVGIVIDPIQSVKGKVVI 160 DCFRLITPHLIMLGQEPRQTTSNIGHLSKPTMIAVVHGLNRNYYNIVINYRKSVLETQMLMNYHRNKWTDNLQVRDFVTR 240 RRENRETVGNIKDLIDKYNDSIKQELTSTADELAVANVGKLNAKAHIDNHVSRLLKDNSLDTFGTMLAVEMF 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ........................................................................ 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_II007480 19 NSFGGTR|HA 0.098 . BBOV_II007480 43 SSLALLK|ML 0.068 . BBOV_II007480 46 ALLKMLK|HG 0.067 . BBOV_II007480 49 KMLKHGR|AG 0.102 . BBOV_II007480 99 VYQTEMK|DK 0.061 . BBOV_II007480 101 QTEMKDK|LK 0.074 . BBOV_II007480 103 EMKDKLK|LT 0.072 . BBOV_II007480 107 KLKLTGR|PE 0.083 . BBOV_II007480 142 FEQLNPR|AV 0.170 . BBOV_II007480 155 DPIQSVK|GK 0.062 . BBOV_II007480 157 IQSVKGK|VV 0.119 . BBOV_II007480 164 VVIDCFR|LI 0.092 . BBOV_II007480 178 MLGQEPR|QT 0.105 . BBOV_II007480 189 NIGHLSK|PT 0.074 . BBOV_II007480 201 VVHGLNR|NY 0.083 . BBOV_II007480 211 NIVINYR|KS 0.071 . BBOV_II007480 212 IVINYRK|SV 0.143 . BBOV_II007480 225 MLMNYHR|NK 0.089 . BBOV_II007480 227 MNYHRNK|WT 0.075 . BBOV_II007480 235 TDNLQVR|DF 0.116 . BBOV_II007480 240 VRDFVTR|RR 0.091 . BBOV_II007480 241 RDFVTRR|RE 0.105 . BBOV_II007480 242 DFVTRRR|EN 0.106 . BBOV_II007480 245 TRRRENR|ET 0.428 . BBOV_II007480 252 ETVGNIK|DL 0.070 . BBOV_II007480 257 IKDLIDK|YN 0.065 . BBOV_II007480 263 KYNDSIK|QE 0.065 . BBOV_II007480 280 AVANVGK|LN 0.068 . BBOV_II007480 284 VGKLNAK|AH 0.064 . BBOV_II007480 293 IDNHVSR|LL 0.105 . BBOV_II007480 296 HVSRLLK|DN 0.175 . ____________________________^_________________

  • Fasta :-

    >BBOV_II007480 ATGGGAGACCCTGGTATGAGCTATCAGAACATGTTAAATTCCTTTGGTGGAACTCGACAC GCTCAGGGCTTCGGTCCTATAGCAGACACTGCGGAGCAGGTCTACATATCGTCGTTGGCT CTTCTTAAGATGCTGAAACACGGTAGGGCTGGCGTTCCTATGGAAGTCATGGGCCTTATG CTCGGGGAGTTTATTGATGACTATACTATAGTTGTTGTCGATGTGTTTTCTATGCCACAA TCAGGCAACAGTGTGAGTGTCGAGGCTGTGGATCCCGTCTACCAAACTGAGATGAAGGAC AAGCTTAAGCTTACTGGTCGTCCTGAGGTGGTTGTAGGATGGTACCATTCTCACCCAGGT TTTGGATGCTGGTTTTCTGGCACTGACATTAACACTCAGCAAAGCTTTGAGCAGTTGAAT CCACGTGCTGTGGGCATAGTGATTGATCCCATTCAATCTGTGAAGGGGAAGGTTGTTATT GACTGTTTCCGTTTGATAACTCCTCATTTGATTATGCTTGGTCAGGAGCCCAGGCAGACG ACTAGCAACATTGGTCACTTGAGTAAGCCTACTATGATTGCTGTTGTCCATGGTTTAAAC CGCAATTACTACAACATCGTTATTAACTACCGCAAGAGTGTTTTGGAGACTCAGATGTTA ATGAACTACCATCGCAACAAGTGGACTGACAATCTCCAGGTTAGGGACTTTGTTACTCGT CGTCGTGAGAATCGTGAGACTGTCGGTAACATTAAGGACTTGATTGATAAGTACAACGAC TCTATAAAGCAGGAGTTGACATCGACTGCTGATGAGTTGGCTGTGGCCAACGTCGGTAAG CTCAATGCCAAGGCGCACATCGACAACCATGTTAGTCGTCTTCTCAAGGACAATTCACTG GACACCTTTGGTACTATGCTGGCGGTTGAAATGTTTTGA
  • Download Fasta

  • Fasta :-

    MGDPGMSYQNMLNSFGGTRHAQGFGPIADTAEQVYISSLALLKMLKHGRAGVPMEVMGLM LGEFIDDYTIVVVDVFSMPQSGNSVSVEAVDPVYQTEMKDKLKLTGRPEVVVGWYHSHPG FGCWFSGTDINTQQSFEQLNPRAVGIVIDPIQSVKGKVVIDCFRLITPHLIMLGQEPRQT TSNIGHLSKPTMIAVVHGLNRNYYNIVINYRKSVLETQMLMNYHRNKWTDNLQVRDFVTR RRENRETVGNIKDLIDKYNDSIKQELTSTADELAVANVGKLNAKAHIDNHVSRLLKDNSL DTFGTMLAVEMF

  • title: MPN+ (JAMM) motif
  • coordinates: E55,H116,H118,S126,D129
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
BBOV_II007480213 SNYRKSVLET0.994unspBBOV_II007480268 SQELTSTADE0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India