BBOV_III000270 | signal peptidase, putative

  • Computed_GO_Component_IDs:  GO:0016020      

  • Computed_GO_Components:  membrane      

  • Computed_GO_Function_IDs:  GO:0008233      

  • Computed_GO_Functions:  peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006465      

  • Computed_GO_Processes:  signal peptide processing      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
BBOV_III000270OTHER0.9958470.0037450.000408
No Results

  • Fasta :-

    >BBOV_III000270 MDYIKSEINTFKNDVRVFLKRPRESIEQLLRTACVLFTALMLWKSVTLYTGTDSPVVVVL SGSMEPAFYRGDILFLMKQEKITAGDIVVFKVEGRDIPIVHRALSLHANGHDINVLTKGD NNEVADRGLYARGQKWLADENILGTVLLCIPKFGLLTIQLNDNPVVKWLLISVLIYLVMT GKG
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_III000270.fa Sequence name : BBOV_III000270 Sequence length : 183 VALUES OF COMPUTED PARAMETERS Coef20 : 3.870 CoefTot : 0.000 ChDiff : 2 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.588 2.053 0.335 0.709 MesoH : -0.211 0.696 -0.259 0.291 MuHd_075 : 14.480 5.400 3.293 3.339 MuHd_095 : 25.120 18.416 7.893 6.790 MuHd_100 : 35.440 25.770 9.872 9.343 MuHd_105 : 36.066 28.059 9.595 9.846 Hmax_075 : 3.150 7.700 -1.272 3.800 Hmax_095 : 7.300 14.000 0.689 5.820 Hmax_100 : 11.400 17.200 1.211 6.200 Hmax_105 : 1.925 11.987 -0.955 4.638 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9337 0.0663 DFMC : 0.9634 0.0366
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 183 BBOV_III000270 MDYIKSEINTFKNDVRVFLKRPRESIEQLLRTACVLFTALMLWKSVTLYTGTDSPVVVVLSGSMEPAFYRGDILFLMKQE 80 KITAGDIVVFKVEGRDIPIVHRALSLHANGHDINVLTKGDNNEVADRGLYARGQKWLADENILGTVLLCIPKFGLLTIQL 160 NDNPVVKWLLISVLIYLVMTGKG 240 ................................................................................ 80 ................................................................................ 160 ....................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_III000270 5 --MDYIK|SE 0.067 . BBOV_III000270 12 SEINTFK|ND 0.062 . BBOV_III000270 16 TFKNDVR|VF 0.077 . BBOV_III000270 20 DVRVFLK|RP 0.062 . BBOV_III000270 21 VRVFLKR|PR 0.214 . BBOV_III000270 23 VFLKRPR|ES 0.084 . BBOV_III000270 31 SIEQLLR|TA 0.085 . BBOV_III000270 44 TALMLWK|SV 0.104 . BBOV_III000270 70 MEPAFYR|GD 0.083 . BBOV_III000270 78 DILFLMK|QE 0.055 . BBOV_III000270 81 FLMKQEK|IT 0.067 . BBOV_III000270 91 GDIVVFK|VE 0.068 . BBOV_III000270 95 VFKVEGR|DI 0.111 . BBOV_III000270 102 DIPIVHR|AL 0.085 . BBOV_III000270 118 DINVLTK|GD 0.067 . BBOV_III000270 127 NNEVADR|GL 0.092 . BBOV_III000270 132 DRGLYAR|GQ 0.095 . BBOV_III000270 135 LYARGQK|WL 0.114 . BBOV_III000270 152 VLLCIPK|FG 0.052 . BBOV_III000270 167 NDNPVVK|WL 0.069 . BBOV_III000270 182 YLVMTGK|G- 0.066 . ____________________________^_________________

  • Fasta :-

    >BBOV_III000270 ATGGACTACATCAAATCGGAAATTAACACCTTCAAAAATGATGTGCGGGTGTTTCTAAAG CGGCCGCGCGAAAGTATCGAGCAGCTGCTTCGAACTGCCTGCGTACTCTTCACAGCCCTG ATGCTATGGAAGTCAGTAACTCTCTACACCGGTACTGACTCACCTGTCGTGGTGGTCCTC AGTGGGAGTATGGAACCGGCATTCTACCGTGGCGACATACTGTTTCTCATGAAGCAGGAA AAGATAACTGCTGGAGATATAGTTGTATTCAAGGTTGAAGGTAGAGATATACCAATAGTC CACCGTGCGTTGAGCCTCCATGCCAATGGACATGATATCAACGTCCTTACAAAGGGTGAC AACAATGAGGTAGCTGATAGGGGACTCTATGCGCGCGGACAGAAGTGGCTAGCGGACGAA AATATACTAGGAACCGTTTTACTATGTATCCCCAAATTTGGGCTACTCACCATACAACTA AACGACAATCCTGTTGTCAAATGGTTGCTGATATCGGTACTCATATACTTGGTAATGACT GGAAAAGGGTGATACATTACCAAATAGCATTGTGTTAAAACAGCAATGGATAATTT
  • Download Fasta

  • Fasta :-

    MDYIKSEINTFKNDVRVFLKRPRESIEQLLRTACVLFTALMLWKSVTLYTGTDSPVVVVL SGSMEPAFYRGDILFLMKQEKITAGDIVVFKVEGRDIPIVHRALSLHANGHDINVLTKGD NNEVADRGLYARGQKWLADENILGTVLLCIPKFGLLTIQLNDNPVVKWLLISVLIYLVMT GKG

    No Results
  • title: Catalytic site
  • coordinates: S63,H101
No Results
No Results
IDSitePeptideScoreMethod
BBOV_III00027025 SRPRESIEQL0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India