BBOV_III000740 | hypothetical protein

  • Computed_GO_Component_IDs:  GO:0016020      

  • Computed_GO_Components:  membrane      

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

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  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
BBOV_III000740SP0.4871630.5000760.012761CS pos: 29-30. IEA-VN. Pr: 0.9122
No Results

  • Fasta :-

    >BBOV_III000740 MMMLMLPSKLYPIIICIFLYELVKHNIEAVNIAPRRLSARLQNYGKTKRNCARAFVITSF ISPDTNGNELQERKSLSNTGIVANKRFGKLHGEKSNCSVALSNAMGKCGITISRIIGDTV QELGKRLIENKYYKHGTSLMMLMKQRLSTLSTIEQIALAIIGQCVYAFYLPGVHLIFPYQ IIPTTSGFGVDIGIDSLVSLASSYLLWRSLQKPESHQLTLKPNDTVIIPIVATGLLASFY LSAYAARVVDNVLLLLSAMDWPVDPALQRSVTILLSHLTWVILGVKMLNYVVPLNQKKTL WYTLNSEELWVYKALMGYFVSCGVYNVADLIFNILQAFSKLIHPQLIIKEDITPEFVHVE TSSMIPSIVTALGPCITAPWWEEMLYRVFVFKVINAKLPRNIATCIAALVFAVHHMNPHS IIQLFALGVLWSFIEQGTNNVFISMAIHSLWNTRIMLGTLMGK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_III000740.fa Sequence name : BBOV_III000740 Sequence length : 463 VALUES OF COMPUTED PARAMETERS Coef20 : 4.294 CoefTot : -0.333 ChDiff : 13 ZoneTo : 20 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.935 2.012 0.366 0.748 MesoH : 0.599 1.122 -0.052 0.442 MuHd_075 : 6.025 10.900 2.554 2.000 MuHd_095 : 12.908 13.236 2.304 4.332 MuHd_100 : 12.364 11.671 2.471 4.036 MuHd_105 : 10.254 10.511 3.197 3.893 Hmax_075 : 21.700 21.000 4.037 7.000 Hmax_095 : 22.000 24.238 4.722 7.770 Hmax_100 : 18.700 24.900 4.431 7.680 Hmax_105 : 20.067 24.500 5.985 7.160 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7064 0.2936 DFMC : 0.8662 0.1338
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 463 BBOV_III000740 MMMLMLPSKLYPIIICIFLYELVKHNIEAVNIAPRRLSARLQNYGKTKRNCARAFVITSFISPDTNGNELQERKSLSNTG 80 IVANKRFGKLHGEKSNCSVALSNAMGKCGITISRIIGDTVQELGKRLIENKYYKHGTSLMMLMKQRLSTLSTIEQIALAI 160 IGQCVYAFYLPGVHLIFPYQIIPTTSGFGVDIGIDSLVSLASSYLLWRSLQKPESHQLTLKPNDTVIIPIVATGLLASFY 240 LSAYAARVVDNVLLLLSAMDWPVDPALQRSVTILLSHLTWVILGVKMLNYVVPLNQKKTLWYTLNSEELWVYKALMGYFV 320 SCGVYNVADLIFNILQAFSKLIHPQLIIKEDITPEFVHVETSSMIPSIVTALGPCITAPWWEEMLYRVFVFKVINAKLPR 400 NIATCIAALVFAVHHMNPHSIIQLFALGVLWSFIEQGTNNVFISMAIHSLWNTRIMLGTLMGK 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ............................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_III000740 9 MLMLPSK|LY 0.066 . BBOV_III000740 24 FLYELVK|HN 0.062 . BBOV_III000740 35 AVNIAPR|RL 0.101 . BBOV_III000740 36 VNIAPRR|LS 0.110 . BBOV_III000740 40 PRRLSAR|LQ 0.104 . BBOV_III000740 46 RLQNYGK|TK 0.063 . BBOV_III000740 48 QNYGKTK|RN 0.067 . BBOV_III000740 49 NYGKTKR|NC 0.150 . BBOV_III000740 53 TKRNCAR|AF 0.107 . BBOV_III000740 73 GNELQER|KS 0.079 . BBOV_III000740 74 NELQERK|SL 0.106 . BBOV_III000740 85 TGIVANK|RF 0.066 . BBOV_III000740 86 GIVANKR|FG 0.131 . BBOV_III000740 89 ANKRFGK|LH 0.162 . BBOV_III000740 94 GKLHGEK|SN 0.074 . BBOV_III000740 107 LSNAMGK|CG 0.074 . BBOV_III000740 114 CGITISR|II 0.105 . BBOV_III000740 125 TVQELGK|RL 0.058 . BBOV_III000740 126 VQELGKR|LI 0.124 . BBOV_III000740 131 KRLIENK|YY 0.073 . BBOV_III000740 134 IENKYYK|HG 0.067 . BBOV_III000740 144 SLMMLMK|QR 0.065 . BBOV_III000740 146 MMLMKQR|LS 0.078 . BBOV_III000740 208 SSYLLWR|SL 0.156 . BBOV_III000740 212 LWRSLQK|PE 0.070 . BBOV_III000740 221 SHQLTLK|PN 0.069 . BBOV_III000740 247 LSAYAAR|VV 0.186 . BBOV_III000740 269 VDPALQR|SV 0.173 . BBOV_III000740 286 WVILGVK|ML 0.058 . BBOV_III000740 297 VVPLNQK|KT 0.052 . BBOV_III000740 298 VPLNQKK|TL 0.100 . BBOV_III000740 313 EELWVYK|AL 0.068 . BBOV_III000740 340 ILQAFSK|LI 0.080 . BBOV_III000740 349 HPQLIIK|ED 0.064 . BBOV_III000740 387 WEEMLYR|VF 0.076 . BBOV_III000740 392 YRVFVFK|VI 0.081 . BBOV_III000740 397 FKVINAK|LP 0.060 . BBOV_III000740 400 INAKLPR|NI 0.114 . BBOV_III000740 454 HSLWNTR|IM 0.085 . BBOV_III000740 463 LGTLMGK|-- 0.061 . ____________________________^_________________

  • Fasta :-

    >BBOV_III000740 ATGATGATGCTAATGTTGCCATCGAAACTCTATCCTATTATCATATGCATTTTTCTGTAT GAATTGGTTAAACATAATATAGAAGCTGTTAATATCGCACCTAGAAGACTGTCTGCAAGA CTACAGAATTATGGTAAAACCAAGAGAAACTGTGCACGAGCATTCGTGATCACCTCATTT ATATCACCGGACACCAATGGAAATGAGCTACAAGAACGCAAATCTCTGTCAAACACTGGT ATAGTCGCAAATAAGAGGTTTGGCAAACTTCATGGTGAAAAATCCAATTGTTCCGTTGCT TTGTCTAATGCGATGGGCAAATGTGGAATAACTATATCAAGAATCATCGGTGACACTGTG CAAGAGCTCGGTAAAAGACTTATTGAAAACAAATATTATAAACATGGTACTTCACTAATG ATGTTGATGAAGCAAAGATTATCAACGTTGTCGACAATTGAACAAATTGCATTGGCCATA ATAGGGCAGTGTGTTTACGCCTTCTATTTACCTGGAGTCCACCTTATTTTCCCGTATCAG ATCATTCCTACTACTTCAGGATTTGGAGTTGATATAGGCATTGATTCATTGGTCTCATTA GCATCATCTTACCTGTTGTGGAGGTCCCTGCAAAAACCGGAGAGCCACCAGTTAACACTC AAACCAAATGATACCGTCATCATTCCAATCGTCGCTACTGGTTTATTGGCTAGCTTCTAT TTGTCCGCGTATGCAGCTAGAGTTGTAGATAATGTATTGCTATTGTTATCCGCAATGGAC TGGCCGGTTGACCCTGCACTGCAAAGATCAGTGACCATACTACTCAGTCACCTTACATGG GTTATATTAGGTGTAAAAATGCTCAACTATGTTGTGCCTTTGAATCAAAAGAAAACATTA TGGTACACTTTAAATTCGGAGGAACTATGGGTATATAAAGCGTTGATGGGCTACTTCGTA TCCTGTGGAGTATACAATGTTGCTGATCTGATATTCAATATTCTACAAGCATTTAGCAAA CTTATACACCCACAGTTGATCATTAAAGAGGATATTACCCCGGAATTTGTGCACGTAGAG ACATCTAGTATGATTCCTTCCATTGTCACAGCCCTTGGCCCCTGTATTACGGCGCCATGG TGGGAAGAGATGTTATACCGTGTATTTGTTTTTAAAGTGATAAATGCTAAGTTGCCTAGG AATATAGCGACTTGTATTGCAGCTCTAGTGTTTGCTGTACATCACATGAATCCACACAGC ATAATACAGCTATTCGCCTTAGGAGTCCTTTGGTCATTCATTGAGCAAGGAACTAACAAT GTGTTCATTAGCATGGCAATCCATTCATTGTGGAATACAAGAATAATGCTAGGAACGCTC ATGGGCAAATGA
  • Download Fasta

  • Fasta :-

    MMMLMLPSKLYPIIICIFLYELVKHNIEAVNIAPRRLSARLQNYGKTKRNCARAFVITSF ISPDTNGNELQERKSLSNTGIVANKRFGKLHGEKSNCSVALSNAMGKCGITISRIIGDTV QELGKRLIENKYYKHGTSLMMLMKQRLSTLSTIEQIALAIIGQCVYAFYLPGVHLIFPYQ IIPTTSGFGVDIGIDSLVSLASSYLLWRSLQKPESHQLTLKPNDTVIIPIVATGLLASFY LSAYAARVVDNVLLLLSAMDWPVDPALQRSVTILLSHLTWVILGVKMLNYVVPLNQKKTL WYTLNSEELWVYKALMGYFVSCGVYNVADLIFNILQAFSKLIHPQLIIKEDITPEFVHVE TSSMIPSIVTALGPCITAPWWEEMLYRVFVFKVINAKLPRNIATCIAALVFAVHHMNPHS IIQLFALGVLWSFIEQGTNNVFISMAIHSLWNTRIMLGTLMGK

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
BBOV_III00074075 SQERKSLSNT0.995unspBBOV_III000740151 SLSTLSTIEQ0.992unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India