BBOV_III003510 | eukaryotic aspartyl protease family protein

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_IDPredictionOTHERSPmTPCS_Position
BBOV_III003510SP0.0936820.8852350.021084CS pos: 21-22. ANA-LG. Pr: 0.8622
No Results

  • Fasta :-

    >BBOV_III003510 MKISVISVLSLVPAFYQHANALGSGLRSLSNGLKDDIDKIYIDAYDVLDPDAVQPRWNKT AQALQKALRINYPRMLSSQLFVKPKYEIQLHRFTQVHRKKKESRYQKYTEHDPSFLGHDV ATKQDNIDTFNNTVTRLSQFLLNFENNQYFGEIEVGTPPEKFVVVFDTGSSQLWIPSKEC SSTGCSTHRKFDAKGSSTYKKAPLDAANAYIQYGTGECVLALGSDTVKIGPLEVKNQSIG LATYESDHPFGDLPFDGLVGLGFPDKMYKDTDGMLPLLDNIMQQKLLNRNLVAFYMSKDK TQPGSMSFGSIDPRYVLPGHSPWWFPVVATDFWEIAMEAILIDGKPMKLENKYNAAIDTG SSLISGPSEVVGPLLDRLALSPDCSNLNQLPTISFVFVDMNGRKIKFDMSPDDYVERIEY DDSEFIATKNEPNNDATEQNKNAEIKATENTQCVIGIMTMDVPKPKGPLFVMGVNFINRY MAIFDRDAMAVGLVPSAHKVDEREEQRKLEEEFNIIEGMAM
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_III003510.fa Sequence name : BBOV_III003510 Sequence length : 521 VALUES OF COMPUTED PARAMETERS Coef20 : 4.176 CoefTot : -0.086 ChDiff : -14 ZoneTo : 34 KR : 3 DE : 0 CleavSite : 37 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.194 1.388 0.066 0.571 MesoH : -0.415 0.316 -0.368 0.271 MuHd_075 : 21.454 11.411 5.436 4.493 MuHd_095 : 27.389 22.649 6.524 7.233 MuHd_100 : 36.474 27.672 10.009 9.442 MuHd_105 : 40.030 29.518 12.096 10.160 Hmax_075 : 6.213 7.088 -0.422 2.700 Hmax_095 : 9.975 13.000 0.535 4.305 Hmax_100 : 14.400 15.800 2.800 5.320 Hmax_105 : 16.100 19.367 3.405 6.417 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.2308 0.7692 DFMC : 0.2377 0.7623 This protein is probably imported in chloroplast. f(Ser) = 0.1765 f(Arg) = 0.0294 CMi = 1.58730 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 521 BBOV_III003510 MKISVISVLSLVPAFYQHANALGSGLRSLSNGLKDDIDKIYIDAYDVLDPDAVQPRWNKTAQALQKALRINYPRMLSSQL 80 FVKPKYEIQLHRFTQVHRKKKESRYQKYTEHDPSFLGHDVATKQDNIDTFNNTVTRLSQFLLNFENNQYFGEIEVGTPPE 160 KFVVVFDTGSSQLWIPSKECSSTGCSTHRKFDAKGSSTYKKAPLDAANAYIQYGTGECVLALGSDTVKIGPLEVKNQSIG 240 LATYESDHPFGDLPFDGLVGLGFPDKMYKDTDGMLPLLDNIMQQKLLNRNLVAFYMSKDKTQPGSMSFGSIDPRYVLPGH 320 SPWWFPVVATDFWEIAMEAILIDGKPMKLENKYNAAIDTGSSLISGPSEVVGPLLDRLALSPDCSNLNQLPTISFVFVDM 400 NGRKIKFDMSPDDYVERIEYDDSEFIATKNEPNNDATEQNKNAEIKATENTQCVIGIMTMDVPKPKGPLFVMGVNFINRY 480 MAIFDRDAMAVGLVPSAHKVDEREEQRKLEEEFNIIEGMAM 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ......................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_III003510 2 -----MK|IS 0.063 . BBOV_III003510 27 ALGSGLR|SL 0.150 . BBOV_III003510 34 SLSNGLK|DD 0.075 . BBOV_III003510 39 LKDDIDK|IY 0.065 . BBOV_III003510 56 PDAVQPR|WN 0.125 . BBOV_III003510 59 VQPRWNK|TA 0.126 . BBOV_III003510 66 TAQALQK|AL 0.076 . BBOV_III003510 69 ALQKALR|IN 0.088 . BBOV_III003510 74 LRINYPR|ML 0.150 . BBOV_III003510 83 SSQLFVK|PK 0.072 . BBOV_III003510 85 QLFVKPK|YE 0.074 . BBOV_III003510 92 YEIQLHR|FT 0.102 . BBOV_III003510 98 RFTQVHR|KK 0.081 . BBOV_III003510 99 FTQVHRK|KK 0.082 . BBOV_III003510 100 TQVHRKK|KE 0.127 . BBOV_III003510 101 QVHRKKK|ES 0.447 . BBOV_III003510 104 RKKKESR|YQ 0.130 . BBOV_III003510 107 KESRYQK|YT 0.221 . BBOV_III003510 123 GHDVATK|QD 0.059 . BBOV_III003510 136 FNNTVTR|LS 0.085 . BBOV_III003510 161 VGTPPEK|FV 0.068 . BBOV_III003510 178 QLWIPSK|EC 0.068 . BBOV_III003510 189 TGCSTHR|KF 0.116 . BBOV_III003510 190 GCSTHRK|FD 0.129 . BBOV_III003510 194 HRKFDAK|GS 0.098 . BBOV_III003510 200 KGSSTYK|KA 0.063 . BBOV_III003510 201 GSSTYKK|AP 0.151 . BBOV_III003510 228 LGSDTVK|IG 0.060 . BBOV_III003510 235 IGPLEVK|NQ 0.072 . BBOV_III003510 266 GLGFPDK|MY 0.072 . BBOV_III003510 269 FPDKMYK|DT 0.092 . BBOV_III003510 285 DNIMQQK|LL 0.068 . BBOV_III003510 289 QQKLLNR|NL 0.078 . BBOV_III003510 298 VAFYMSK|DK 0.072 . BBOV_III003510 300 FYMSKDK|TQ 0.057 . BBOV_III003510 314 FGSIDPR|YV 0.151 . BBOV_III003510 345 AILIDGK|PM 0.053 . BBOV_III003510 348 IDGKPMK|LE 0.067 . BBOV_III003510 352 PMKLENK|YN 0.069 . BBOV_III003510 377 VGPLLDR|LA 0.065 . BBOV_III003510 403 FVDMNGR|KI 0.064 . BBOV_III003510 404 VDMNGRK|IK 0.077 . BBOV_III003510 406 MNGRKIK|FD 0.180 . BBOV_III003510 417 PDDYVER|IE 0.071 . BBOV_III003510 429 SEFIATK|NE 0.057 . BBOV_III003510 441 DATEQNK|NA 0.067 . BBOV_III003510 446 NKNAEIK|AT 0.090 . BBOV_III003510 464 MTMDVPK|PK 0.081 . BBOV_III003510 466 MDVPKPK|GP 0.067 . BBOV_III003510 479 GVNFINR|YM 0.092 . BBOV_III003510 486 YMAIFDR|DA 0.202 . BBOV_III003510 499 LVPSAHK|VD 0.058 . BBOV_III003510 503 AHKVDER|EE 0.087 . BBOV_III003510 507 DEREEQR|KL 0.098 . BBOV_III003510 508 EREEQRK|LE 0.081 . ____________________________^_________________

  • Fasta :-

    >BBOV_III003510 ATGAAGATATCGGTGATATCGGTACTGAGCCTTGTACCGGCATTCTATCAACATGCCAAT GCACTAGGAAGCGGGCTTAGAAGCTTAAGCAACGGTCTTAAGGATGATATCGACAAGATA TACATCGATGCATACGATGTGTTGGACCCAGATGCAGTTCAACCTAGATGGAATAAAACA GCACAAGCATTACAAAAGGCACTGAGGATAAACTACCCAAGAATGCTGTCATCACAGCTA TTCGTTAAACCGAAATATGAAATCCAGCTACATAGATTCACACAAGTACATCGCAAGAAA AAGGAATCAAGATATCAGAAATATACAGAACATGATCCATCATTCCTAGGACATGATGTA GCAACAAAACAAGACAATATAGATACATTTAATAACACAGTCACGAGATTGTCACAGTTT CTGCTGAATTTCGAAAATAACCAGTATTTTGGAGAAATCGAAGTGGGCACGCCGCCAGAA AAGTTTGTAGTGGTATTCGATACCGGTTCAAGCCAGCTGTGGATACCGTCCAAGGAATGC TCAAGCACCGGGTGCTCGACGCACAGGAAATTTGATGCCAAGGGATCTAGTACATACAAA AAGGCGCCATTAGATGCAGCCAATGCGTATATACAATATGGAACTGGTGAATGCGTACTG GCACTCGGGTCAGATACAGTCAAAATCGGGCCTCTTGAAGTGAAAAACCAATCCATAGGA TTGGCGACATACGAAAGTGATCACCCATTTGGAGATTTACCATTCGACGGACTTGTGGGA CTGGGCTTCCCAGATAAGATGTACAAAGATACCGATGGAATGCTGCCATTATTGGATAAC ATAATGCAACAGAAGTTACTTAACCGGAATTTAGTGGCATTCTACATGTCAAAGGATAAG ACGCAACCCGGTTCAATGTCATTCGGAAGCATAGACCCAAGATACGTACTGCCAGGACAT AGCCCATGGTGGTTCCCAGTGGTAGCCACTGATTTCTGGGAAATAGCAATGGAAGCTATA CTAATTGACGGAAAACCAATGAAACTAGAAAATAAGTACAATGCCGCAATAGATACGGGA AGTAGTTTAATATCAGGACCCTCAGAAGTAGTTGGACCATTACTGGATAGACTAGCACTG TCACCAGATTGCAGTAATCTAAATCAATTGCCAACTATATCGTTTGTATTCGTGGATATG AACGGAAGGAAAATAAAATTCGATATGTCACCAGACGATTATGTTGAACGTATCGAATAC GATGACAGTGAATTTATCGCAACAAAAAATGAACCAAACAATGACGCAACGGAACAAAAT AAAAATGCTGAAATTAAAGCAACAGAAAACACACAATGCGTTATAGGAATAATGACAATG GATGTACCCAAACCTAAAGGACCACTGTTCGTAATGGGAGTCAACTTCATCAACAGATAC ATGGCAATATTCGATAGAGATGCCATGGCAGTTGGATTGGTGCCATCAGCACACAAAGTT GACGAAAGAGAAGAGCAACGCAAGCTAGAAGAGGAGTTCAATATCATAGAAGGTATGGCA ATGTAA
  • Download Fasta

  • Fasta :-

    MKISVISVLSLVPAFYQHANALGSGLRSLSNGLKDDIDKIYIDAYDVLDPDAVQPRWNKT AQALQKALRINYPRMLSSQLFVKPKYEIQLHRFTQVHRKKKESRYQKYTEHDPSFLGHDV ATKQDNIDTFNNTVTRLSQFLLNFENNQYFGEIEVGTPPEKFVVVFDTGSSQLWIPSKEC SSTGCSTHRKFDAKGSSTYKKAPLDAANAYIQYGTGECVLALGSDTVKIGPLEVKNQSIG LATYESDHPFGDLPFDGLVGLGFPDKMYKDTDGMLPLLDNIMQQKLLNRNLVAFYMSKDK TQPGSMSFGSIDPRYVLPGHSPWWFPVVATDFWEIAMEAILIDGKPMKLENKYNAAIDTG SSLISGPSEVVGPLLDRLALSPDCSNLNQLPTISFVFVDMNGRKIKFDMSPDDYVERIEY DDSEFIATKNEPNNDATEQNKNAEIKATENTQCVIGIMTMDVPKPKGPLFVMGVNFINRY MAIFDRDAMAVGLVPSAHKVDEREEQRKLEEEFNIIEGMAM

  • title: inhibitor binding site
  • coordinates: D167,G169,S171,Y210,I211,Q212,L258
No Results
No Results
IDSitePeptideScoreMethod
BBOV_III003510410 SKFDMSPDDY0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India