BBOV_III003800 | SCP-like extracellular protein family protein

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_IDPredictionOTHERSPmTPCS_Position
BBOV_III003800OTHER0.9994350.0003230.000242
No Results

  • Fasta :-

    >BBOV_III003800 MRIVNDDTEVYSRQIKSRCHFEEGRMLAALNDRREFHSSPSLKWNADLATSARNMASELS RRINCQLPLYYREELGTNYLSADLEHFSESLAAEFWYEGHLDYDFEKGGPLNRNPNVLSF TQMVWRSTREVGCAVACCDGRQVVLVCRFHPPGNIQGQFIGNVLEKFNRLKNRESGISTE L
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_III003800.fa Sequence name : BBOV_III003800 Sequence length : 181 VALUES OF COMPUTED PARAMETERS Coef20 : 4.068 CoefTot : 0.001 ChDiff : -2 ZoneTo : 5 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.200 1.535 0.320 0.336 MesoH : -1.165 -0.107 -0.493 0.073 MuHd_075 : 17.024 10.190 3.003 5.077 MuHd_095 : 38.550 19.818 9.659 8.157 MuHd_100 : 34.584 17.460 8.648 7.020 MuHd_105 : 29.551 13.448 7.054 5.468 Hmax_075 : -6.533 2.800 -3.324 2.007 Hmax_095 : 1.400 6.900 -0.228 3.030 Hmax_100 : 5.400 4.300 -0.748 2.390 Hmax_105 : -5.100 5.950 -2.127 1.948 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9290 0.0710 DFMC : 0.9808 0.0192
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 181 BBOV_III003800 MRIVNDDTEVYSRQIKSRCHFEEGRMLAALNDRREFHSSPSLKWNADLATSARNMASELSRRINCQLPLYYREELGTNYL 80 SADLEHFSESLAAEFWYEGHLDYDFEKGGPLNRNPNVLSFTQMVWRSTREVGCAVACCDGRQVVLVCRFHPPGNIQGQFI 160 GNVLEKFNRLKNRESGISTEL 240 ................................................................................ 80 ................................................P............................... 160 ..................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ BBOV_III003800 2 -----MR|IV 0.120 . BBOV_III003800 13 DTEVYSR|QI 0.075 . BBOV_III003800 16 VYSRQIK|SR 0.233 . BBOV_III003800 18 SRQIKSR|CH 0.179 . BBOV_III003800 25 CHFEEGR|ML 0.082 . BBOV_III003800 33 LAALNDR|RE 0.075 . BBOV_III003800 34 AALNDRR|EF 0.109 . BBOV_III003800 43 HSSPSLK|WN 0.084 . BBOV_III003800 53 DLATSAR|NM 0.091 . BBOV_III003800 61 MASELSR|RI 0.120 . BBOV_III003800 62 ASELSRR|IN 0.126 . BBOV_III003800 72 QLPLYYR|EE 0.061 . BBOV_III003800 107 LDYDFEK|GG 0.059 . BBOV_III003800 113 KGGPLNR|NP 0.070 . BBOV_III003800 126 FTQMVWR|ST 0.190 . BBOV_III003800 129 MVWRSTR|EV 0.523 *ProP* BBOV_III003800 141 VACCDGR|QV 0.089 . BBOV_III003800 148 QVVLVCR|FH 0.090 . BBOV_III003800 166 IGNVLEK|FN 0.071 . BBOV_III003800 169 VLEKFNR|LK 0.074 . BBOV_III003800 171 EKFNRLK|NR 0.072 . BBOV_III003800 173 FNRLKNR|ES 0.148 . ____________________________^_________________

  • Fasta :-

    >BBOV_III003800 ATGCGTATAGTGAATGATGATACTGAGGTTTACAGTCGTCAAATCAAGTCTAGATGCCAC TTTGAGGAGGGACGCATGCTTGCTGCCCTTAATGATCGCAGGGAATTCCACTCATCTCCA TCACTAAAATGGAATGCCGATTTGGCCACATCAGCTCGCAATATGGCATCTGAGCTGAGT CGGCGTATAAACTGTCAACTACCGTTATATTACCGGGAGGAGCTCGGCACCAATTATTTA TCAGCCGATTTGGAGCACTTTAGTGAGTCTCTTGCAGCCGAGTTTTGGTATGAGGGTCAC CTTGACTATGACTTTGAGAAAGGCGGCCCTCTTAATCGCAATCCGAATGTGTTATCCTTT ACTCAGATGGTATGGCGTTCTACTAGGGAAGTTGGATGTGCCGTTGCCTGTTGTGACGGT CGTCAGGTTGTGCTAGTATGTCGCTTCCATCCTCCTGGTAACATTCAAGGTCAATTCATT GGTAACGTTTTAGAGAAGTTCAATCGGCTTAAGAATCGCGAATCCGGGATTTCTACAGAG CTTTGA
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  • Fasta :-

    MRIVNDDTEVYSRQIKSRCHFEEGRMLAALNDRREFHSSPSLKWNADLATSARNMASELS RRINCQLPLYYREELGTNYLSADLEHFSESLAAEFWYEGHLDYDFEKGGPLNRNPNVLSF TQMVWRSTREVGCAVACCDGRQVVLVCRFHPPGNIQGQFIGNVLEKFNRLKNRESGISTE L

    No Results
No Results
No Results
IDSitePeptideScoreMethod
BBOV_III003800175 SKNRESGIST0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India