BBOV_III004920 | exonuclease family protein

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_IDPredictionOTHERSPmTPCS_Position
BBOV_III004920OTHER0.9976440.0001480.002209
No Results

  • Fasta :-

    >BBOV_III004920 MLIYRKCNMGVIKEINPSADGDVTMINVNGRIVPLPAPNEKIPIPASIFISESNIAHNPR AHDKNRTFVPFSVNELLTIRHKDYIVALDVEGVKTGVETLEGSRYRKLPDAFSSPRTMTM NRESFVYSADETEEQELSTLARYVSKHVPRLLNRVSAVRGCGEAFGIPFLDHYIHRREPP KDYLTRFSGIHQGDLDLKSSLHWLTTRKSIYMKIRYLVDAGCKILGHGLEQDFKMLNIVV PKSQVIDTVELYRLPGRRYISLQFLAAHILNIRIQDGEHDSIEDAKAALYLYRVQREGGT SRCTSVIV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_III004920.fa Sequence name : BBOV_III004920 Sequence length : 308 VALUES OF COMPUTED PARAMETERS Coef20 : 3.718 CoefTot : -0.510 ChDiff : 5 ZoneTo : 13 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.176 0.912 -0.080 0.385 MesoH : -1.157 0.225 -0.510 0.123 MuHd_075 : 17.302 15.250 5.564 4.119 MuHd_095 : 23.904 17.349 9.706 5.933 MuHd_100 : 19.359 11.707 7.655 4.383 MuHd_105 : 12.155 8.307 4.693 2.495 Hmax_075 : 8.600 14.400 2.653 4.630 Hmax_095 : 8.400 15.400 3.066 5.070 Hmax_100 : 7.300 10.100 1.522 3.840 Hmax_105 : -0.400 8.600 0.379 2.910 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8569 0.1431 DFMC : 0.8675 0.1325
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 308 BBOV_III004920 MLIYRKCNMGVIKEINPSADGDVTMINVNGRIVPLPAPNEKIPIPASIFISESNIAHNPRAHDKNRTFVPFSVNELLTIR 80 HKDYIVALDVEGVKTGVETLEGSRYRKLPDAFSSPRTMTMNRESFVYSADETEEQELSTLARYVSKHVPRLLNRVSAVRG 160 CGEAFGIPFLDHYIHRREPPKDYLTRFSGIHQGDLDLKSSLHWLTTRKSIYMKIRYLVDAGCKILGHGLEQDFKMLNIVV 240 PKSQVIDTVELYRLPGRRYISLQFLAAHILNIRIQDGEHDSIEDAKAALYLYRVQREGGTSRCTSVIV 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .................................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_III004920 5 --MLIYR|KC 0.079 . BBOV_III004920 6 -MLIYRK|CN 0.076 . BBOV_III004920 13 CNMGVIK|EI 0.076 . BBOV_III004920 31 MINVNGR|IV 0.108 . BBOV_III004920 41 LPAPNEK|IP 0.062 . BBOV_III004920 60 NIAHNPR|AH 0.136 . BBOV_III004920 64 NPRAHDK|NR 0.073 . BBOV_III004920 66 RAHDKNR|TF 0.096 . BBOV_III004920 80 NELLTIR|HK 0.072 . BBOV_III004920 82 LLTIRHK|DY 0.075 . BBOV_III004920 94 LDVEGVK|TG 0.055 . BBOV_III004920 104 ETLEGSR|YR 0.056 . BBOV_III004920 106 LEGSRYR|KL 0.109 . BBOV_III004920 107 EGSRYRK|LP 0.179 . BBOV_III004920 116 DAFSSPR|TM 0.085 . BBOV_III004920 122 RTMTMNR|ES 0.083 . BBOV_III004920 142 ELSTLAR|YV 0.296 . BBOV_III004920 146 LARYVSK|HV 0.086 . BBOV_III004920 150 VSKHVPR|LL 0.096 . BBOV_III004920 154 VPRLLNR|VS 0.084 . BBOV_III004920 159 NRVSAVR|GC 0.117 . BBOV_III004920 176 LDHYIHR|RE 0.080 . BBOV_III004920 177 DHYIHRR|EP 0.107 . BBOV_III004920 181 HRREPPK|DY 0.088 . BBOV_III004920 186 PKDYLTR|FS 0.141 . BBOV_III004920 198 QGDLDLK|SS 0.072 . BBOV_III004920 207 LHWLTTR|KS 0.073 . BBOV_III004920 208 HWLTTRK|SI 0.116 . BBOV_III004920 213 RKSIYMK|IR 0.069 . BBOV_III004920 215 SIYMKIR|YL 0.143 . BBOV_III004920 223 LVDAGCK|IL 0.071 . BBOV_III004920 234 GLEQDFK|ML 0.068 . BBOV_III004920 242 LNIVVPK|SQ 0.077 . BBOV_III004920 253 DTVELYR|LP 0.073 . BBOV_III004920 257 LYRLPGR|RY 0.075 . BBOV_III004920 258 YRLPGRR|YI 0.194 . BBOV_III004920 273 AHILNIR|IQ 0.077 . BBOV_III004920 286 DSIEDAK|AA 0.068 . BBOV_III004920 293 AALYLYR|VQ 0.091 . BBOV_III004920 296 YLYRVQR|EG 0.371 . BBOV_III004920 302 REGGTSR|CT 0.107 . ____________________________^_________________

  • Fasta :-

    >BBOV_III004920 ATGCTCATATATAGAAAATGTAACATGGGTGTAATTAAGGAAATTAACCCATCCGCTGAT GGTGATGTGACCATGATTAACGTCAATGGAAGAATAGTACCATTGCCCGCACCAAATGAA AAGATACCTATACCGGCATCTATATTTATATCGGAATCTAATATCGCACATAACCCTCGA GCACATGATAAAAATCGGACATTTGTCCCGTTCTCAGTAAATGAGCTTCTTACTATTCGT CACAAGGATTATATAGTAGCGCTGGATGTTGAAGGTGTAAAGACAGGAGTTGAAACATTG GAAGGTTCAAGATACCGAAAACTACCGGATGCTTTTAGTTCACCCCGGACTATGACGATG AATAGAGAATCGTTCGTATATTCTGCTGATGAAACCGAAGAACAAGAATTGTCAACGTTA GCAAGGTACGTATCAAAACATGTTCCCAGATTACTTAACAGAGTGAGTGCAGTACGAGGG TGTGGAGAAGCTTTTGGCATCCCATTCCTGGACCATTATATACATCGTCGAGAACCGCCT AAAGATTATCTTACGAGGTTCTCGGGCATACACCAAGGTGACCTAGATTTGAAATCATCA TTGCACTGGCTGACAACTAGGAAATCTATCTATATGAAAATTAGATATCTAGTGGACGCA GGATGTAAGATATTGGGGCATGGCTTAGAACAGGATTTCAAAATGCTAAATATAGTAGTC CCAAAGTCACAGGTTATTGACACCGTTGAATTGTACAGATTGCCAGGGCGAAGATATATC TCTCTGCAATTCCTTGCGGCGCATATATTGAATATAAGAATACAAGATGGCGAACATGAC TCTATCGAGGACGCAAAAGCAGCGCTCTACCTTTATAGAGTACAAAGAGAAGGGGGAACT TCAAGATGTACTAGCGTCATTGTATGA
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  • Fasta :-

    MLIYRKCNMGVIKEINPSADGDVTMINVNGRIVPLPAPNEKIPIPASIFISESNIAHNPR AHDKNRTFVPFSVNELLTIRHKDYIVALDVEGVKTGVETLEGSRYRKLPDAFSSPRTMTM NRESFVYSADETEEQELSTLARYVSKHVPRLLNRVSAVRGCGEAFGIPFLDHYIHRREPP KDYLTRFSGIHQGDLDLKSSLHWLTTRKSIYMKIRYLVDAGCKILGHGLEQDFKMLNIVV PKSQVIDTVELYRLPGRRYISLQFLAAHILNIRIQDGEHDSIEDAKAALYLYRVQREGGT SRCTSVIV

  • title: active site
  • coordinates: D89,V90,E91,G92,K94,L184,S188,H227,G228,E230,Q231,D232,H279,D284
No Results
No Results
IDSitePeptideScoreMethod
BBOV_III004920281 SGEHDSIEDA0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India