BBOV_III007870 | conserved hypothetical protein

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_IDPredictionOTHERSPmTPCS_Position
BBOV_III007870OTHER0.9996500.0001650.000185
No Results

  • Fasta :-

    >BBOV_III007870 MFPAYVNFCRNQRVDILAYDYSGYGLSDGEPAEKCLYSDIEHVYKYVRSWLKVKPELIIL YGNSLGSVPSSYLASMPEKYPIGGLILDAPLSSAIRLQVGYVKKTPRFDAFANIEYLKSK ALYPTLVIHGTSDGIIPIEHARDLAFVVEVRHAELMPEGNYTLQFDMESSKESCDDSVPV FSRPGIELIKQPEDLLRTWWVPGAGHNNIQLDYPEAYVRTIEVFFKLCTTWRINRKG
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_III007870.fa Sequence name : BBOV_III007870 Sequence length : 237 VALUES OF COMPUTED PARAMETERS Coef20 : 3.993 CoefTot : -0.422 ChDiff : -4 ZoneTo : 14 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.059 1.100 0.105 0.516 MesoH : -0.447 0.348 -0.329 0.236 MuHd_075 : 10.343 3.211 3.567 1.957 MuHd_095 : 15.097 13.833 5.859 2.551 MuHd_100 : 13.093 9.476 4.803 2.675 MuHd_105 : 13.704 3.873 3.478 3.477 Hmax_075 : 4.200 10.033 0.862 3.390 Hmax_095 : 9.000 12.163 1.407 3.560 Hmax_100 : 11.100 12.000 1.567 4.140 Hmax_105 : 7.700 10.733 2.013 3.967 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9307 0.0693 DFMC : 0.9010 0.0990
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 237 BBOV_III007870 MFPAYVNFCRNQRVDILAYDYSGYGLSDGEPAEKCLYSDIEHVYKYVRSWLKVKPELIILYGNSLGSVPSSYLASMPEKY 80 PIGGLILDAPLSSAIRLQVGYVKKTPRFDAFANIEYLKSKALYPTLVIHGTSDGIIPIEHARDLAFVVEVRHAELMPEGN 160 YTLQFDMESSKESCDDSVPVFSRPGIELIKQPEDLLRTWWVPGAGHNNIQLDYPEAYVRTIEVFFKLCTTWRINRKG 240 ................................................................................ 80 ................................................................................ 160 ............................................................................. 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_III007870 10 AYVNFCR|NQ 0.080 . BBOV_III007870 13 NFCRNQR|VD 0.133 . BBOV_III007870 34 DGEPAEK|CL 0.061 . BBOV_III007870 45 DIEHVYK|YV 0.084 . BBOV_III007870 48 HVYKYVR|SW 0.132 . BBOV_III007870 52 YVRSWLK|VK 0.053 . BBOV_III007870 54 RSWLKVK|PE 0.066 . BBOV_III007870 79 LASMPEK|YP 0.078 . BBOV_III007870 96 PLSSAIR|LQ 0.072 . BBOV_III007870 103 LQVGYVK|KT 0.057 . BBOV_III007870 104 QVGYVKK|TP 0.079 . BBOV_III007870 107 YVKKTPR|FD 0.088 . BBOV_III007870 118 ANIEYLK|SK 0.066 . BBOV_III007870 120 IEYLKSK|AL 0.077 . BBOV_III007870 142 IPIEHAR|DL 0.132 . BBOV_III007870 151 AFVVEVR|HA 0.095 . BBOV_III007870 171 FDMESSK|ES 0.060 . BBOV_III007870 183 SVPVFSR|PG 0.089 . BBOV_III007870 190 PGIELIK|QP 0.067 . BBOV_III007870 197 QPEDLLR|TW 0.092 . BBOV_III007870 219 YPEAYVR|TI 0.089 . BBOV_III007870 226 TIEVFFK|LC 0.066 . BBOV_III007870 232 KLCTTWR|IN 0.109 . BBOV_III007870 235 TTWRINR|KG 0.178 . BBOV_III007870 236 TWRINRK|G- 0.105 . ____________________________^_________________

  • Fasta :-

    >BBOV_III007870 GCGGGAGATAAGGCATCCAATGATAAATCCGAAGGACGCTACAACAATGACCGAGAACTT GTTGTCTTCAGCCATGGCAACAGCACTGATATCGGCTATATGTTTCCCGCGTACGTCAAT TTTTGCAGAAATCAAAGAGTAGATATACTGGCATACGACTACAGCGGATACGGGCTGTCT GACGGTGAACCTGCTGAAAAGTGCCTCTACAGTGATATCGAACACGTATACAAGTATGTC AGAAGTTGGCTGAAAGTAAAGCCGGAACTGATCATCCTATACGGTAACTCACTAGGATCT GTACCATCCTCTTATTTGGCCAGCATGCCCGAGAAATATCCAATAGGCGGGCTTATTCTA GACGCTCCACTGTCATCAGCCATAAGGTTACAGGTAGGCTACGTTAAGAAGACGCCGCGA TTCGATGCTTTCGCCAATATAGAGTACCTCAAGAGCAAGGCATTGTACCCGACACTTGTT ATACACGGTACATCTGATGGGATCATACCGATCGAACACGCACGAGACCTAGCTTTCGTG GTTGAGGTACGACATGCTGAACTCATGCCCGAAGGAAACTATACCCTGCAATTTGATATG GAATCTAGCAAAGAATCATGCGATGATAGCGTACCCGTGTTCAGCCGTCCTGGCATCGAA CTGATTAAACAACCAGAGGACCTACTCCGCACATGGTGGGTACCAGGTGCTGGACATAAC AACATACAATTGGATTACCCAGAAGCTTATGTCCGTACTATTGAGGTGTTTTTTAAACTA TGTACAACATGGAGAATTAATAGAAAAGGTTAA
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  • Fasta :-

    MFPAYVNFCRNQRVDILAYDYSGYGLSDGEPAEKCLYSDIEHVYKYVRSWLKVKPELIIL YGNSLGSVPSSYLASMPEKYPIGGLILDAPLSSAIRLQVGYVKKTPRFDAFANIEYLKSK ALYPTLVIHGTSDGIIPIEHARDLAFVVEVRHAELMPEGNYTLQFDMESSKESCDDSVPV FSRPGIELIKQPEDLLRTWWVPGAGHNNIQLDYPEAYVRTIEVFFKLCTTWRINRKG

    No Results
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IDSitePeptideScoreMethod
BBOV_III007870173 SSSKESCDDS0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India