BBOV_III008600 | Der1-like family protein

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_IDPredictionOTHERSPmTPCS_Position
BBOV_III008600OTHER0.9997370.0000970.000166
No Results

  • Fasta :-

    >BBOV_III008600 MWNTMDGQGPEAWYASLPKVTKTIITSMFILTLFTTFKIISLQSIVLDWQIIRKTYGVHR ILLACLYAGQFSFRWVIQAYMFSQFSTTLERNPVFSSSVGSYLYFILIEVVLICLISLIF YWPSGFPFLNDALMFSILYYWSKRDMWNSVSIYVFTVKAYQLPYAMLFLNFIMGAPMIIN IIGMIAGHIYYLIREVLPTMGYKNYVSKTPHWIDYIAGRLDAMYEYAGLNMGQRPFSGPY NLYRQRPIRIPFTGRGVRLGTL
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_III008600.fa Sequence name : BBOV_III008600 Sequence length : 262 VALUES OF COMPUTED PARAMETERS Coef20 : 3.191 CoefTot : -0.134 ChDiff : 10 ZoneTo : 5 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.088 2.918 0.512 0.919 MesoH : 0.829 1.114 -0.003 0.508 MuHd_075 : 9.022 3.732 2.776 0.292 MuHd_095 : 22.619 13.141 4.566 3.788 MuHd_100 : 17.036 9.944 3.246 2.516 MuHd_105 : 9.379 5.855 1.512 1.083 Hmax_075 : 9.917 2.683 -0.161 3.220 Hmax_095 : 14.525 5.600 -0.479 4.305 Hmax_100 : 13.800 2.700 -0.967 3.820 Hmax_105 : 11.783 3.967 -0.191 3.488 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9944 0.0056 DFMC : 0.9963 0.0037
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 262 BBOV_III008600 MWNTMDGQGPEAWYASLPKVTKTIITSMFILTLFTTFKIISLQSIVLDWQIIRKTYGVHRILLACLYAGQFSFRWVIQAY 80 MFSQFSTTLERNPVFSSSVGSYLYFILIEVVLICLISLIFYWPSGFPFLNDALMFSILYYWSKRDMWNSVSIYVFTVKAY 160 QLPYAMLFLNFIMGAPMIINIIGMIAGHIYYLIREVLPTMGYKNYVSKTPHWIDYIAGRLDAMYEYAGLNMGQRPFSGPY 240 NLYRQRPIRIPFTGRGVRLGTL 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ...................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_III008600 19 WYASLPK|VT 0.074 . BBOV_III008600 22 SLPKVTK|TI 0.072 . BBOV_III008600 38 TLFTTFK|II 0.067 . BBOV_III008600 53 LDWQIIR|KT 0.084 . BBOV_III008600 54 DWQIIRK|TY 0.090 . BBOV_III008600 60 KTYGVHR|IL 0.096 . BBOV_III008600 74 AGQFSFR|WV 0.177 . BBOV_III008600 91 FSTTLER|NP 0.059 . BBOV_III008600 143 ILYYWSK|RD 0.060 . BBOV_III008600 144 LYYWSKR|DM 0.219 . BBOV_III008600 158 IYVFTVK|AY 0.059 . BBOV_III008600 194 HIYYLIR|EV 0.109 . BBOV_III008600 203 LPTMGYK|NY 0.062 . BBOV_III008600 208 YKNYVSK|TP 0.072 . BBOV_III008600 219 IDYIAGR|LD 0.093 . BBOV_III008600 234 GLNMGQR|PF 0.091 . BBOV_III008600 244 GPYNLYR|QR 0.094 . BBOV_III008600 246 YNLYRQR|PI 0.087 . BBOV_III008600 249 YRQRPIR|IP 0.346 . BBOV_III008600 255 RIPFTGR|GV 0.124 . BBOV_III008600 258 FTGRGVR|LG 0.126 . ____________________________^_________________

  • Fasta :-

    >BBOV_III008600 AAATATGTCATATTTAACAAGCTGTACAGCATAATAATATTGTTTTATCTATATTTATTG CCAAAATATATACAATAGCTCCAGGCACACTGTGGATTGACGAAGTAATATTAGCTTAAT GGCTGGTTTATAAAGCTTGTGTGTATCTCTCATTCTAATAGGATACTATTTTAAATGTTA AATGTGGAACACGATGGATGGACAAGGACCGGAGGCTTGGTATGCATCCTTGCCCAAAGT CACCAAAACTATAATAACATCAATGTTCATTCTGACGTTGTTTACTACATTTAAGATCAT ATCTTTACAAAGTATTGTACTTGATTGGCAAATTATTCGTAAAACATATGGTGTACACCG AATATTATTGGCATGTCTATATGCAGGTCAGTTCTCATTTAGGTGGGTTATTCAAGCGTA TATGTTCTCACAATTCTCTACTACACTAGAGAGGAACCCAGTATTCAGTAGTTCAGTCGG CTCGTATCTATATTTCATTTTGATAGAGGTAGTGTTGATCTGTCTGATCAGCCTAATCTT CTACTGGCCTTCAGGATTCCCATTTCTTAATGATGCGCTGATGTTTTCAATATTATACTA CTGGTCAAAACGCGACATGTGGAACTCGGTGTCGATATATGTATTCACGGTTAAAGCATA TCAGTTGCCTTATGCTATGCTTTTTCTCAACTTCATCATGGGCGCTCCCATGATAATTAA CATTATCGGTATGATTGCCGGCCACATATATTACCTTATAAGGGAAGTTTTGCCAACTAT GGGATACAAAAATTACGTATCGAAAACCCCTCACTGGATAGACTACATCGCCGGAAGACT TGATGCGATGTATGAGTATGCTGGCCTAAATATGGGACAGAGACCATTCTCAGGACCTTA TAATCTATATCGGCAAAGACCAATACGTATTCCATTTACTGGTAGAGGTGTGCGTTTGGG TACACTGTGA
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  • Fasta :-

    MWNTMDGQGPEAWYASLPKVTKTIITSMFILTLFTTFKIISLQSIVLDWQIIRKTYGVHR ILLACLYAGQFSFRWVIQAYMFSQFSTTLERNPVFSSSVGSYLYFILIEVVLICLISLIF YWPSGFPFLNDALMFSILYYWSKRDMWNSVSIYVFTVKAYQLPYAMLFLNFIMGAPMIIN IIGMIAGHIYYLIREVLPTMGYKNYVSKTPHWIDYIAGRLDAMYEYAGLNMGQRPFSGPY NLYRQRPIRIPFTGRGVRLGTL

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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India