BBOV_III009190 | proteasome A-type and B-type family protein

_IDPredictionOTHERSPmTPCS_Position
BBOV_III009190OTHER0.9999450.0000390.000016
No Results

  • Fasta :-

    >BBOV_III009190 MSRRYDTKTTTFSQEGRLYQVEYALEAINNANLTVGLLCDLGVVLAADKPISTPLLDPGK INEKLYKLDSHMFCAVAGLTADATVLINTCKLYAQRHRYAYGEPQDVEQHVVQICNLKQS YTQFGGLRPFGVSFLFAGWDSHLGFQLYHTDPSGNYSGWKATAIGHNSQPAQSMLRQEWK EGMNLDEALYLAVKVLTKSMDSTMPKADKIEVGMLWRGPNGDGEPTVEMVSESRVAEILS KLTDEAAAKAVESGHSI
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_III009190.fa Sequence name : BBOV_III009190 Sequence length : 257 VALUES OF COMPUTED PARAMETERS Coef20 : 4.117 CoefTot : 0.225 ChDiff : -6 ZoneTo : 5 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.212 1.824 0.233 0.599 MesoH : -0.454 0.550 -0.301 0.269 MuHd_075 : 20.011 4.518 4.084 5.164 MuHd_095 : 15.645 5.618 3.445 3.162 MuHd_100 : 22.571 9.614 4.744 5.709 MuHd_105 : 23.205 11.158 4.938 6.733 Hmax_075 : -8.400 -5.163 -4.037 -0.922 Hmax_095 : -2.187 -3.325 -2.391 -0.289 Hmax_100 : 9.800 0.700 0.016 2.170 Hmax_105 : -2.450 -3.967 -2.377 1.132 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9366 0.0634 DFMC : 0.8772 0.1228
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 257 BBOV_III009190 MSRRYDTKTTTFSQEGRLYQVEYALEAINNANLTVGLLCDLGVVLAADKPISTPLLDPGKINEKLYKLDSHMFCAVAGLT 80 ADATVLINTCKLYAQRHRYAYGEPQDVEQHVVQICNLKQSYTQFGGLRPFGVSFLFAGWDSHLGFQLYHTDPSGNYSGWK 160 ATAIGHNSQPAQSMLRQEWKEGMNLDEALYLAVKVLTKSMDSTMPKADKIEVGMLWRGPNGDGEPTVEMVSESRVAEILS 240 KLTDEAAAKAVESGHSI 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_III009190 3 ----MSR|RY 0.107 . BBOV_III009190 4 ---MSRR|YD 0.179 . BBOV_III009190 8 SRRYDTK|TT 0.080 . BBOV_III009190 17 TFSQEGR|LY 0.096 . BBOV_III009190 49 VVLAADK|PI 0.060 . BBOV_III009190 60 PLLDPGK|IN 0.060 . BBOV_III009190 64 PGKINEK|LY 0.055 . BBOV_III009190 67 INEKLYK|LD 0.074 . BBOV_III009190 91 VLINTCK|LY 0.061 . BBOV_III009190 96 CKLYAQR|HR 0.081 . BBOV_III009190 98 LYAQRHR|YA 0.136 . BBOV_III009190 118 VQICNLK|QS 0.066 . BBOV_III009190 128 TQFGGLR|PF 0.094 . BBOV_III009190 160 GNYSGWK|AT 0.075 . BBOV_III009190 176 PAQSMLR|QE 0.087 . BBOV_III009190 180 MLRQEWK|EG 0.065 . BBOV_III009190 194 ALYLAVK|VL 0.060 . BBOV_III009190 198 AVKVLTK|SM 0.072 . BBOV_III009190 206 MDSTMPK|AD 0.080 . BBOV_III009190 209 TMPKADK|IE 0.059 . BBOV_III009190 217 EVGMLWR|GP 0.076 . BBOV_III009190 234 EMVSESR|VA 0.077 . BBOV_III009190 241 VAEILSK|LT 0.062 . BBOV_III009190 249 TDEAAAK|AV 0.097 . ____________________________^_________________

  • Fasta :-

    >BBOV_III009190 ATGTCGCGTCGTTACGATACTAAGACTACTACCTTTTCTCAGGAGGGTCGTTTGTATCAG GTGGAGTACGCATTAGAGGCCATTAACAATGCGAATTTGACTGTTGGTTTGTTGTGTGAC CTCGGTGTAGTATTGGCTGCTGATAAACCAATCAGTACTCCACTACTAGACCCTGGTAAG ATAAATGAGAAGTTGTACAAGTTGGATTCTCACATGTTTTGTGCTGTTGCTGGTTTGACT GCTGATGCCACTGTATTGATAAACACTTGCAAGCTGTATGCTCAGAGGCACAGGTACGCT TACGGCGAGCCTCAGGATGTTGAGCAGCATGTTGTACAGATATGTAATTTGAAGCAGAGT TACACTCAATTTGGTGGTTTACGTCCATTTGGCGTTAGCTTTTTATTTGCTGGTTGGGAC AGTCATTTAGGTTTTCAGCTTTATCACACTGATCCCTCTGGTAACTATTCTGGTTGGAAG GCTACTGCCATAGGTCACAACAGTCAGCCAGCTCAATCCATGTTACGTCAGGAGTGGAAG GAAGGTATGAACCTTGATGAGGCCTTATATTTGGCCGTTAAGGTGCTTACTAAATCTATG GACTCTACTATGCCAAAAGCTGACAAGATTGAGGTTGGTATGTTATGGCGCGGTCCTAAT GGCGACGGCGAGCCTACAGTTGAGATGGTTTCGGAGTCTCGCGTTGCTGAGATACTATCT AAGTTGACTGATGAAGCAGCTGCCAAGGCTGTTGAGTCAGGCCACTCGATATGA
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  • Fasta :-

    MSRRYDTKTTTFSQEGRLYQVEYALEAINNANLTVGLLCDLGVVLAADKPISTPLLDPGK INEKLYKLDSHMFCAVAGLTADATVLINTCKLYAQRHRYAYGEPQDVEQHVVQICNLKQS YTQFGGLRPFGVSFLFAGWDSHLGFQLYHTDPSGNYSGWKATAIGHNSQPAQSMLRQEWK EGMNLDEALYLAVKVLTKSMDSTMPKADKIEVGMLWRGPNGDGEPTVEMVSESRVAEILS KLTDEAAAKAVESGHSI

  • title: active site
  • coordinates: N32,D48,P50,K64,H166
No Results
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India