BBOV_III009430 | glycoprotease family protein

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_IDPredictionOTHERSPmTPCS_Position
BBOV_III009430OTHER0.5138310.4844060.001763
No Results

  • Fasta :-

    >BBOV_III009430 MFDYINNGKYIFCLCVLCNLIFDIGTRCVAVSVGVRVPLRSLDSTGFLVSRRLLRHPKAH WLHSLPISTEEDVRCSYTTQLESCLEQLKSDCPANGSNYYILAIETSCDDCCAAVVSSNG DVVSEERASNPDSLIKFGGIKPDESYRFHLDNIDRIMNEVVSKAKLKFEDIGYIVATRGP GMRICLNAGYDAAERISKTYSIPLIGENHLAGHCLSPFIKGHQLRMTHDRGSVASEELKY PYLSLLLSGGHSQIYVVESPYQYHMLVDTMDHYAGNVLYKCAKELGLPIDTGGGPSIEEA ARKRQGRPMFRMTEPCKGMSFTSFCFSGIQTQLRSMVSKIRQDLGEDALSEDPKLVNHLA YTCQEVTFNQVIRQLDKALDICETLFGISQIVVVGGRSGFIENKFF
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_III009430.fa Sequence name : BBOV_III009430 Sequence length : 406 VALUES OF COMPUTED PARAMETERS Coef20 : 3.910 CoefTot : -1.148 ChDiff : -5 ZoneTo : 69 KR : 8 DE : 3 CleavSite : 29 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.247 1.929 0.422 0.640 MesoH : -0.656 0.468 -0.277 0.182 MuHd_075 : 32.765 23.969 8.599 9.103 MuHd_095 : 48.680 23.626 11.392 10.836 MuHd_100 : 43.057 20.229 9.736 9.823 MuHd_105 : 33.397 20.173 9.870 6.993 Hmax_075 : 14.817 18.083 5.237 5.962 Hmax_095 : 15.400 25.800 3.254 5.180 Hmax_100 : 12.800 12.900 2.314 4.950 Hmax_105 : 13.900 23.200 7.847 5.635 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8237 0.1763 DFMC : 0.9238 0.0762
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 406 BBOV_III009430 MFDYINNGKYIFCLCVLCNLIFDIGTRCVAVSVGVRVPLRSLDSTGFLVSRRLLRHPKAHWLHSLPISTEEDVRCSYTTQ 80 LESCLEQLKSDCPANGSNYYILAIETSCDDCCAAVVSSNGDVVSEERASNPDSLIKFGGIKPDESYRFHLDNIDRIMNEV 160 VSKAKLKFEDIGYIVATRGPGMRICLNAGYDAAERISKTYSIPLIGENHLAGHCLSPFIKGHQLRMTHDRGSVASEELKY 240 PYLSLLLSGGHSQIYVVESPYQYHMLVDTMDHYAGNVLYKCAKELGLPIDTGGGPSIEEAARKRQGRPMFRMTEPCKGMS 320 FTSFCFSGIQTQLRSMVSKIRQDLGEDALSEDPKLVNHLAYTCQEVTFNQVIRQLDKALDICETLFGISQIVVVGGRSGF 400 IENKFF 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ...... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_III009430 9 DYINNGK|YI 0.060 . BBOV_III009430 27 IFDIGTR|CV 0.095 . BBOV_III009430 36 AVSVGVR|VP 0.076 . BBOV_III009430 40 GVRVPLR|SL 0.153 . BBOV_III009430 51 TGFLVSR|RL 0.080 . BBOV_III009430 52 GFLVSRR|LL 0.106 . BBOV_III009430 55 VSRRLLR|HP 0.209 . BBOV_III009430 58 RLLRHPK|AH 0.096 . BBOV_III009430 74 STEEDVR|CS 0.078 . BBOV_III009430 89 SCLEQLK|SD 0.072 . BBOV_III009430 127 DVVSEER|AS 0.067 . BBOV_III009430 136 NPDSLIK|FG 0.072 . BBOV_III009430 141 IKFGGIK|PD 0.067 . BBOV_III009430 147 KPDESYR|FH 0.099 . BBOV_III009430 155 HLDNIDR|IM 0.081 . BBOV_III009430 163 MNEVVSK|AK 0.071 . BBOV_III009430 165 EVVSKAK|LK 0.063 . BBOV_III009430 167 VSKAKLK|FE 0.077 . BBOV_III009430 178 GYIVATR|GP 0.084 . BBOV_III009430 183 TRGPGMR|IC 0.100 . BBOV_III009430 195 GYDAAER|IS 0.063 . BBOV_III009430 198 AAERISK|TY 0.130 . BBOV_III009430 220 CLSPFIK|GH 0.067 . BBOV_III009430 225 IKGHQLR|MT 0.159 . BBOV_III009430 230 LRMTHDR|GS 0.171 . BBOV_III009430 239 VASEELK|YP 0.065 . BBOV_III009430 280 AGNVLYK|CA 0.074 . BBOV_III009430 283 VLYKCAK|EL 0.072 . BBOV_III009430 302 SIEEAAR|KR 0.072 . BBOV_III009430 303 IEEAARK|RQ 0.084 . BBOV_III009430 304 EEAARKR|QG 0.197 . BBOV_III009430 307 ARKRQGR|PM 0.316 . BBOV_III009430 311 QGRPMFR|MT 0.122 . BBOV_III009430 317 RMTEPCK|GM 0.063 . BBOV_III009430 334 GIQTQLR|SM 0.128 . BBOV_III009430 339 LRSMVSK|IR 0.087 . BBOV_III009430 341 SMVSKIR|QD 0.081 . BBOV_III009430 354 ALSEDPK|LV 0.084 . BBOV_III009430 373 TFNQVIR|QL 0.191 . BBOV_III009430 377 VIRQLDK|AL 0.075 . BBOV_III009430 397 IVVVGGR|SG 0.101 . BBOV_III009430 404 SGFIENK|FF 0.068 . ____________________________^_________________

  • Fasta :-

    >BBOV_III009430 ATGTTCGATTATATCAACAATGGCAAATATATTTTTTGTTTGTGTGTATTGTGTAATCTA ATTTTTGATATTGGAACGAGGTGTGTCGCTGTATCGGTGGGTGTAAGGGTTCCTTTACGT AGCCTGGATAGTACGGGATTCCTGGTATCAAGAAGATTATTAAGGCATCCTAAAGCCCAT TGGCTTCATAGCTTGCCAATATCTACTGAGGAAGATGTTCGTTGTAGCTATACAACGCAA CTTGAGAGTTGTCTTGAACAACTCAAAAGCGATTGCCCCGCCAATGGTAGCAATTACTAC ATCCTTGCAATAGAGACAAGTTGTGACGATTGCTGCGCTGCTGTTGTATCGAGCAACGGT GATGTTGTATCTGAAGAACGTGCCAGTAACCCTGATTCATTGATCAAGTTTGGAGGTATT AAACCAGATGAATCATATCGATTCCACTTGGATAACATAGATCGCATTATGAATGAAGTT GTGTCAAAAGCTAAGCTTAAATTTGAGGACATTGGGTACATTGTCGCCACTCGAGGACCT GGAATGCGTATATGCCTCAATGCGGGTTACGATGCTGCAGAACGCATTTCTAAAACGTAT AGTATCCCATTGATTGGGGAGAACCATTTAGCTGGGCATTGCCTATCACCATTTATCAAA GGCCACCAATTACGTATGACGCATGATCGCGGCTCTGTTGCATCAGAGGAATTGAAATAT CCCTACCTATCACTTTTATTATCTGGAGGACACTCCCAGATATACGTTGTTGAGAGTCCG TATCAATACCACATGCTTGTTGATACTATGGACCATTACGCCGGCAATGTATTATACAAA TGTGCTAAGGAGCTTGGTTTGCCTATAGACACCGGTGGTGGACCTTCCATTGAGGAAGCA GCTCGGAAAAGACAAGGGCGTCCAATGTTCAGGATGACTGAGCCTTGCAAGGGCATGTCG TTTACTAGTTTCTGCTTTTCCGGTATACAAACGCAGTTGCGCAGTATGGTATCCAAGATA CGCCAAGACCTTGGTGAGGACGCTCTTTCTGAGGATCCTAAACTAGTAAACCATTTAGCC TATACATGTCAAGAGGTCACTTTCAACCAGGTAATACGCCAGTTGGATAAAGCTCTTGAT ATCTGCGAGACATTATTTGGGATATCGCAGATAGTTGTGGTTGGCGGTAGGTCTGGCTTT ATAGAGAACAAGTTTTTCTAG
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  • Fasta :-

    MFDYINNGKYIFCLCVLCNLIFDIGTRCVAVSVGVRVPLRSLDSTGFLVSRRLLRHPKAH WLHSLPISTEEDVRCSYTTQLESCLEQLKSDCPANGSNYYILAIETSCDDCCAAVVSSNG DVVSEERASNPDSLIKFGGIKPDESYRFHLDNIDRIMNEVVSKAKLKFEDIGYIVATRGP GMRICLNAGYDAAERISKTYSIPLIGENHLAGHCLSPFIKGHQLRMTHDRGSVASEELKY PYLSLLLSGGHSQIYVVESPYQYHMLVDTMDHYAGNVLYKCAKELGLPIDTGGGPSIEEA ARKRQGRPMFRMTEPCKGMSFTSFCFSGIQTQLRSMVSKIRQDLGEDALSEDPKLVNHLA YTCQEVTFNQVIRQLDKALDICETLFGISQIVVVGGRSGFIENKFF

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
BBOV_III009430145 SKPDESYRFH0.991unspBBOV_III009430145 SKPDESYRFH0.991unspBBOV_III009430145 SKPDESYRFH0.991unspBBOV_III009430232 SHDRGSVASE0.994unspBBOV_III009430296 SGGGPSIEEA0.995unspBBOV_III00943068 SSLPISTEED0.994unspBBOV_III009430129 SEERASNPDS0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India