BBOV_III010190 | conserved hypothetical protein

_IDPredictionOTHERSPmTPCS_Position
BBOV_III010190OTHER0.9497200.0292610.021019
No Results

  • Fasta :-

    >BBOV_III010190 MSLYRFVGTGGYFLASYIKSPCISQLLMSDSNKLEDSYIYRLSGDDCINKFHYVKLVGII QDYISPATSCLLDTSLTNVKCTSVELLCQRLTNNLQSAILDKLTVDYSKATKFVRWKALG AHLHIINDRLVTLFLEEDWTLAKLRTLVEQHFNIPADSQYLLLYGSPLNNDVLTVKELGI KTNDVIYVIYVPRAANNAYSSAPIKQNDIPSDFETSLQNKARHFLKFYLPNPLKMDALKY EFPDVYEAVRTGEIEQVVEALRKIHLEELEKKKKRQADLIRAYNNPLTPESQQIIQESIQ QERIEENLISAQEHLPESFYKCSMLFIPVQINGVNLEALVDTGAQNSVMRIDYAEKCNLL NIIDRRFQGVAVGISKERIIGKIHMAQMKIGNLFLLFSSSVIEQLNVGFIIGLDIMRQYQ CVVSLKENILYLGEEKVPFMAEKDVVNGTSFFSDAEADTEVEPVNPGKANSIKAITTTEG GSTSIVHKHEDQPSDESVNK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_III010190.fa Sequence name : BBOV_III010190 Sequence length : 500 VALUES OF COMPUTED PARAMETERS Coef20 : 4.009 CoefTot : -0.418 ChDiff : -11 ZoneTo : 29 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.976 1.506 0.145 0.569 MesoH : -0.471 0.626 -0.323 0.276 MuHd_075 : 21.505 21.159 6.503 6.388 MuHd_095 : 24.784 24.025 7.385 7.480 MuHd_100 : 29.962 23.837 8.255 8.428 MuHd_105 : 27.010 18.345 7.317 7.240 Hmax_075 : 13.900 23.800 5.557 7.130 Hmax_095 : 16.275 18.300 4.493 6.860 Hmax_100 : 15.900 17.400 3.139 6.640 Hmax_105 : 13.600 15.700 2.624 6.440 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5445 0.4555 DFMC : 0.6543 0.3457
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 500 BBOV_III010190 MSLYRFVGTGGYFLASYIKSPCISQLLMSDSNKLEDSYIYRLSGDDCINKFHYVKLVGIIQDYISPATSCLLDTSLTNVK 80 CTSVELLCQRLTNNLQSAILDKLTVDYSKATKFVRWKALGAHLHIINDRLVTLFLEEDWTLAKLRTLVEQHFNIPADSQY 160 LLLYGSPLNNDVLTVKELGIKTNDVIYVIYVPRAANNAYSSAPIKQNDIPSDFETSLQNKARHFLKFYLPNPLKMDALKY 240 EFPDVYEAVRTGEIEQVVEALRKIHLEELEKKKKRQADLIRAYNNPLTPESQQIIQESIQQERIEENLISAQEHLPESFY 320 KCSMLFIPVQINGVNLEALVDTGAQNSVMRIDYAEKCNLLNIIDRRFQGVAVGISKERIIGKIHMAQMKIGNLFLLFSSS 400 VIEQLNVGFIIGLDIMRQYQCVVSLKENILYLGEEKVPFMAEKDVVNGTSFFSDAEADTEVEPVNPGKANSIKAITTTEG 480 GSTSIVHKHEDQPSDESVNK 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_III010190 5 --MSLYR|FV 0.236 . BBOV_III010190 19 FLASYIK|SP 0.074 . BBOV_III010190 33 LMSDSNK|LE 0.066 . BBOV_III010190 41 EDSYIYR|LS 0.099 . BBOV_III010190 50 GDDCINK|FH 0.066 . BBOV_III010190 55 NKFHYVK|LV 0.095 . BBOV_III010190 80 TSLTNVK|CT 0.069 . BBOV_III010190 90 VELLCQR|LT 0.072 . BBOV_III010190 102 QSAILDK|LT 0.064 . BBOV_III010190 109 LTVDYSK|AT 0.061 . BBOV_III010190 112 DYSKATK|FV 0.087 . BBOV_III010190 115 KATKFVR|WK 0.089 . BBOV_III010190 117 TKFVRWK|AL 0.105 . BBOV_III010190 129 LHIINDR|LV 0.097 . BBOV_III010190 143 EDWTLAK|LR 0.060 . BBOV_III010190 145 WTLAKLR|TL 0.088 . BBOV_III010190 176 NDVLTVK|EL 0.071 . BBOV_III010190 181 VKELGIK|TN 0.059 . BBOV_III010190 193 YVIYVPR|AA 0.107 . BBOV_III010190 205 YSSAPIK|QN 0.073 . BBOV_III010190 220 ETSLQNK|AR 0.061 . BBOV_III010190 222 SLQNKAR|HF 0.115 . BBOV_III010190 226 KARHFLK|FY 0.073 . BBOV_III010190 234 YLPNPLK|MD 0.054 . BBOV_III010190 239 LKMDALK|YE 0.068 . BBOV_III010190 250 DVYEAVR|TG 0.076 . BBOV_III010190 262 QVVEALR|KI 0.077 . BBOV_III010190 263 VVEALRK|IH 0.067 . BBOV_III010190 271 HLEELEK|KK 0.055 . BBOV_III010190 272 LEELEKK|KK 0.089 . BBOV_III010190 273 EELEKKK|KR 0.081 . BBOV_III010190 274 ELEKKKK|RQ 0.089 . BBOV_III010190 275 LEKKKKR|QA 0.337 . BBOV_III010190 281 RQADLIR|AY 0.096 . BBOV_III010190 303 ESIQQER|IE 0.088 . BBOV_III010190 321 LPESFYK|CS 0.073 . BBOV_III010190 350 AQNSVMR|ID 0.100 . BBOV_III010190 356 RIDYAEK|CN 0.054 . BBOV_III010190 365 LLNIIDR|RF 0.088 . BBOV_III010190 366 LNIIDRR|FQ 0.192 . BBOV_III010190 376 VAVGISK|ER 0.059 . BBOV_III010190 378 VGISKER|II 0.128 . BBOV_III010190 382 KERIIGK|IH 0.074 . BBOV_III010190 389 IHMAQMK|IG 0.062 . BBOV_III010190 417 IGLDIMR|QY 0.077 . BBOV_III010190 426 QCVVSLK|EN 0.063 . BBOV_III010190 436 LYLGEEK|VP 0.057 . BBOV_III010190 443 VPFMAEK|DV 0.101 . BBOV_III010190 468 EPVNPGK|AN 0.079 . BBOV_III010190 473 GKANSIK|AI 0.101 . BBOV_III010190 488 STSIVHK|HE 0.077 . BBOV_III010190 500 SDESVNK|-- 0.069 . ____________________________^_________________

  • Fasta :-

    >BBOV_III010190 ATGTCGTTGTACAGGTTTGTTGGAACGGGTGGATACTTCTTGGCTTCATACATTAAATCA CCATGCATAAGCCAGCTTTTGATGTCTGATTCTAATAAGCTGGAGGATTCTTATATATAT CGCCTTTCGGGAGATGATTGTATCAACAAGTTTCACTACGTCAAACTGGTAGGAATAATA CAAGATTACATATCTCCTGCTACGTCGTGCCTTCTGGACACCTCACTTACAAACGTCAAG TGCACATCCGTCGAATTGTTATGCCAAAGGCTAACAAATAACTTACAAAGTGCTATTTTG GACAAATTAACCGTTGATTATAGCAAGGCTACCAAGTTCGTACGATGGAAGGCGCTTGGT GCCCACTTGCACATTATAAACGACCGGCTTGTTACACTTTTCCTGGAAGAAGACTGGACA TTGGCTAAATTGCGTACACTAGTTGAACAACATTTTAATATACCTGCTGATTCGCAGTAT TTACTGTTATACGGCTCACCTCTGAACAATGATGTTCTTACCGTTAAGGAGCTAGGCATT AAAACAAATGATGTCATTTACGTAATATACGTACCGCGAGCTGCGAATAATGCCTATTCA TCTGCTCCAATTAAACAAAATGATATTCCATCGGATTTCGAAACTAGTTTACAAAATAAG GCAAGGCACTTTCTTAAATTTTACCTTCCAAATCCCTTGAAAATGGATGCTCTGAAGTAT GAATTCCCTGATGTCTACGAAGCTGTTAGAACAGGTGAAATTGAACAGGTAGTAGAAGCT CTGAGGAAAATACATCTAGAGGAATTGGAAAAGAAGAAGAAGCGACAGGCGGATCTTATC CGTGCTTACAACAATCCATTGACCCCGGAATCACAACAAATTATACAGGAGAGTATCCAA CAAGAACGTATTGAAGAAAACCTGATCTCTGCACAGGAGCACCTGCCGGAATCATTCTAC AAGTGTTCCATGTTATTCATACCCGTACAAATAAACGGTGTCAATCTGGAAGCATTGGTT GATACTGGTGCACAAAATTCGGTAATGAGAATTGATTACGCGGAAAAGTGTAATCTACTT AATATCATTGATCGCAGATTCCAAGGCGTGGCTGTTGGCATCAGCAAAGAGAGAATCATT GGTAAGATACACATGGCGCAAATGAAGATAGGGAACCTGTTCTTGTTGTTCTCATCATCG GTAATCGAACAGCTGAACGTTGGCTTCATAATTGGACTTGACATCATGAGGCAATACCAA TGCGTAGTTAGCCTAAAGGAGAACATACTATATCTCGGAGAGGAGAAAGTTCCGTTCATG GCAGAAAAGGATGTGGTTAACGGGACCAGCTTCTTCTCTGACGCGGAGGCAGACACAGAA GTTGAACCGGTAAACCCCGGAAAAGCCAACAGCATCAAAGCAATAACCACCACAGAAGGG GGTTCAACTTCTATAGTCCATAAACATGAAGATCAACCATCAGATGAGAGTGTAAATAAG TAA
  • Download Fasta

  • Fasta :-

    MSLYRFVGTGGYFLASYIKSPCISQLLMSDSNKLEDSYIYRLSGDDCINKFHYVKLVGII QDYISPATSCLLDTSLTNVKCTSVELLCQRLTNNLQSAILDKLTVDYSKATKFVRWKALG AHLHIINDRLVTLFLEEDWTLAKLRTLVEQHFNIPADSQYLLLYGSPLNNDVLTVKELGI KTNDVIYVIYVPRAANNAYSSAPIKQNDIPSDFETSLQNKARHFLKFYLPNPLKMDALKY EFPDVYEAVRTGEIEQVVEALRKIHLEELEKKKKRQADLIRAYNNPLTPESQQIIQESIQ QERIEENLISAQEHLPESFYKCSMLFIPVQINGVNLEALVDTGAQNSVMRIDYAEKCNLL NIIDRRFQGVAVGISKERIIGKIHMAQMKIGNLFLLFSSSVIEQLNVGFIIGLDIMRQYQ CVVSLKENILYLGEEKVPFMAEKDVVNGTSFFSDAEADTEVEPVNPGKANSIKAITTTEG GSTSIVHKHEDQPSDESVNK

  • title: catalytic motif
  • coordinates: D341,T342,G343
No Results
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India