BBOV_IV001260 | mitochondrial processing peptidase beta subunit

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003824      GO:0046872      

  • Computed_GO_Functions:  catalytic activity      metal ion binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
BBOV_IV001260mTP0.4004550.0008930.598652CS pos: 40-41. IRR-VG. Pr: 0.2648
No Results

  • Fasta :-

    >BBOV_IV001260 MAMSTMRGFAGSIASHTYSGFLNKTTAANARNFRTTLIRRVGAVPNAADLLKHSKIITNA NNQPPCEITTLKNGLRVASVWMPGNSTTVGVWIDSGSRFETKETNGAAHFLEHMIFKGTK NRSRLELEEEIEQKGAHLNAYTAREQTGYYARCFNKDVPWCTELLSDILQNSLIEPSQME AEKHVILREMEEVEKSTEEVIFDRLHMTAFRDSSLGFTILGPVENIQNMKREYLVDYIQK NYTADRMVFCCVGNVEHDKVVELAEKHLCTVSQCCATPMTQQIPQGTGKVQLEKPYFVGS ELLNRNDDMGPHAYLAVAFEGVSWTNPDSVCFMLMQSIIGSYKKNQEGIVPGKVSGNKTV HAIANRMTVGCAEAFSAFNTCYKDTGLFGFYAQCDEVAVDHCVGELMFGVTSMSYSITDE EVERAKRQLMLQFLSMNDSTSTVAEEVARQIIVYGRRMPVTEFLLRLEQIDAEEVKRVAW KYLHDHEVAVTAMGPLHGMPSLIDIRQKTYWLRY
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_IV001260.fa Sequence name : BBOV_IV001260 Sequence length : 514 VALUES OF COMPUTED PARAMETERS Coef20 : 4.197 CoefTot : -1.804 ChDiff : -9 ZoneTo : 93 KR : 10 DE : 2 CleavSite : 78 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.347 1.118 0.148 0.501 MesoH : -0.289 0.284 -0.289 0.218 MuHd_075 : 39.354 20.533 8.742 9.344 MuHd_095 : 35.934 21.154 8.584 8.017 MuHd_100 : 30.652 22.401 7.701 6.588 MuHd_105 : 37.514 30.617 11.332 8.437 Hmax_075 : 15.050 13.067 0.797 4.640 Hmax_095 : 8.500 11.900 0.177 3.140 Hmax_100 : 8.500 14.100 2.549 4.080 Hmax_105 : 15.300 26.017 4.580 7.490 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0555 0.9445 DFMC : 0.0376 0.9624 This protein is probably imported in mitochondria. f(Ser) = 0.0753 f(Arg) = 0.0645 CMi = 0.46948 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 514 BBOV_IV001260 MAMSTMRGFAGSIASHTYSGFLNKTTAANARNFRTTLIRRVGAVPNAADLLKHSKIITNANNQPPCEITTLKNGLRVASV 80 WMPGNSTTVGVWIDSGSRFETKETNGAAHFLEHMIFKGTKNRSRLELEEEIEQKGAHLNAYTAREQTGYYARCFNKDVPW 160 CTELLSDILQNSLIEPSQMEAEKHVILREMEEVEKSTEEVIFDRLHMTAFRDSSLGFTILGPVENIQNMKREYLVDYIQK 240 NYTADRMVFCCVGNVEHDKVVELAEKHLCTVSQCCATPMTQQIPQGTGKVQLEKPYFVGSELLNRNDDMGPHAYLAVAFE 320 GVSWTNPDSVCFMLMQSIIGSYKKNQEGIVPGKVSGNKTVHAIANRMTVGCAEAFSAFNTCYKDTGLFGFYAQCDEVAVD 400 HCVGELMFGVTSMSYSITDEEVERAKRQLMLQFLSMNDSTSTVAEEVARQIIVYGRRMPVTEFLLRLEQIDAEEVKRVAW 480 KYLHDHEVAVTAMGPLHGMPSLIDIRQKTYWLRY 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .................................. 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_IV001260 7 MAMSTMR|GF 0.113 . BBOV_IV001260 24 YSGFLNK|TT 0.069 . BBOV_IV001260 31 TTAANAR|NF 0.113 . BBOV_IV001260 34 ANARNFR|TT 0.216 . BBOV_IV001260 39 FRTTLIR|RV 0.154 . BBOV_IV001260 40 RTTLIRR|VG 0.075 . BBOV_IV001260 52 NAADLLK|HS 0.065 . BBOV_IV001260 55 DLLKHSK|II 0.070 . BBOV_IV001260 72 CEITTLK|NG 0.055 . BBOV_IV001260 76 TLKNGLR|VA 0.109 . BBOV_IV001260 98 WIDSGSR|FE 0.071 . BBOV_IV001260 102 GSRFETK|ET 0.081 . BBOV_IV001260 117 LEHMIFK|GT 0.068 . BBOV_IV001260 120 MIFKGTK|NR 0.066 . BBOV_IV001260 122 FKGTKNR|SR 0.123 . BBOV_IV001260 124 GTKNRSR|LE 0.080 . BBOV_IV001260 134 EEEIEQK|GA 0.069 . BBOV_IV001260 144 LNAYTAR|EQ 0.111 . BBOV_IV001260 152 QTGYYAR|CF 0.098 . BBOV_IV001260 156 YARCFNK|DV 0.092 . BBOV_IV001260 183 SQMEAEK|HV 0.084 . BBOV_IV001260 188 EKHVILR|EM 0.149 . BBOV_IV001260 195 EMEEVEK|ST 0.085 . BBOV_IV001260 204 EEVIFDR|LH 0.089 . BBOV_IV001260 211 LHMTAFR|DS 0.136 . BBOV_IV001260 230 ENIQNMK|RE 0.058 . BBOV_IV001260 231 NIQNMKR|EY 0.121 . BBOV_IV001260 240 LVDYIQK|NY 0.062 . BBOV_IV001260 246 KNYTADR|MV 0.137 . BBOV_IV001260 259 GNVEHDK|VV 0.101 . BBOV_IV001260 266 VVELAEK|HL 0.059 . BBOV_IV001260 289 IPQGTGK|VQ 0.060 . BBOV_IV001260 294 GKVQLEK|PY 0.065 . BBOV_IV001260 305 GSELLNR|ND 0.097 . BBOV_IV001260 343 SIIGSYK|KN 0.065 . BBOV_IV001260 344 IIGSYKK|NQ 0.119 . BBOV_IV001260 353 EGIVPGK|VS 0.069 . BBOV_IV001260 358 GKVSGNK|TV 0.081 . BBOV_IV001260 366 VHAIANR|MT 0.087 . BBOV_IV001260 383 AFNTCYK|DT 0.084 . BBOV_IV001260 424 TDEEVER|AK 0.097 . BBOV_IV001260 426 EEVERAK|RQ 0.055 . BBOV_IV001260 427 EVERAKR|QL 0.494 . BBOV_IV001260 449 VAEEVAR|QI 0.109 . BBOV_IV001260 456 QIIVYGR|RM 0.076 . BBOV_IV001260 457 IIVYGRR|MP 0.099 . BBOV_IV001260 466 VTEFLLR|LE 0.063 . BBOV_IV001260 476 IDAEEVK|RV 0.073 . BBOV_IV001260 477 DAEEVKR|VA 0.243 . BBOV_IV001260 481 VKRVAWK|YL 0.105 . BBOV_IV001260 506 PSLIDIR|QK 0.073 . BBOV_IV001260 508 LIDIRQK|TY 0.058 . BBOV_IV001260 513 QKTYWLR|Y- 0.096 . ____________________________^_________________

  • Fasta :-

    >BBOV_IV001260 GCCCAAACACACTATTTTAAACGCTTTAATGATATGTAAACATATTTAAAGCGCAGCAAA ATGGCAATGAGCACGATGCGAGGCTTTGCCGGAAGCATCGCGAGTCATACATATAGCGGC TTCCTAAACAAAACTACAGCTGCCAATGCCAGGAATTTTAGAACTACGTTAATACGTAGA GTTGGAGCAGTGCCAAACGCCGCCGATTTACTCAAACACAGCAAAATAATCACAAACGCC AACAATCAACCTCCATGTGAAATTACCACGCTGAAAAATGGACTTAGAGTGGCATCTGTA TGGATGCCAGGGAACTCGACAACAGTGGGAGTATGGATAGATAGCGGCAGTAGATTCGAG ACTAAGGAAACCAATGGAGCTGCACACTTTCTGGAGCACATGATCTTTAAGGGAACTAAA AACAGATCAAGGCTGGAGCTCGAGGAGGAAATTGAACAGAAGGGAGCCCATCTGAATGCA TACACAGCCAGGGAACAAACAGGGTACTATGCAAGGTGCTTCAATAAAGATGTGCCCTGG TGCACAGAACTGCTCAGTGATATACTGCAAAATAGCCTAATTGAACCAAGCCAGATGGAA GCTGAAAAACATGTAATACTGCGAGAAATGGAAGAAGTAGAAAAGTCAACAGAAGAAGTC ATATTCGATAGATTGCACATGACAGCATTCAGAGATAGCTCGCTGGGATTCACTATCCTG GGACCAGTGGAAAACATACAAAACATGAAGAGGGAGTACCTAGTGGACTACATACAAAAG AACTACACAGCCGATCGTATGGTATTCTGCTGCGTAGGTAACGTGGAGCATGACAAGGTT GTTGAACTAGCAGAAAAACACCTGTGTACCGTAAGTCAGTGCTGTGCAACGCCCATGACC CAACAGATACCACAAGGAACTGGGAAGGTACAATTGGAGAAACCATACTTTGTAGGATCG GAATTACTCAACAGAAATGATGATATGGGACCACACGCGTACCTAGCAGTGGCATTCGAA GGAGTGTCGTGGACTAACCCGGACTCTGTCTGCTTCATGCTCATGCAAAGCATCATTGGA AGCTACAAAAAGAACCAAGAAGGTATTGTACCAGGAAAGGTATCTGGAAATAAAACTGTA CATGCAATTGCCAACCGGATGACAGTGGGTTGCGCAGAAGCATTCAGTGCATTCAACACG TGCTACAAGGATACCGGACTCTTCGGGTTCTACGCACAGTGCGACGAAGTTGCAGTCGAC CACTGCGTTGGAGAACTCATGTTCGGAGTCACATCAATGTCATACAGCATCACAGACGAA GAAGTGGAACGCGCTAAAAGGCAACTCATGCTACAGTTCCTCTCAATGAACGACTCCACA TCAACCGTAGCTGAAGAAGTAGCACGACAAATCATCGTATACGGCAGACGAATGCCAGTC ACAGAGTTCTTACTCAGACTCGAACAAATCGACGCAGAAGAAGTTAAACGGGTAGCATGG AAGTACCTACACGACCACGAAGTGGCAGTCACCGCCATGGGACCACTACACGGAATGCCT TCACTTATCGACATTAGACAAAAAACATACTGGCTGAGGTACTAA
  • Download Fasta

  • Fasta :-

    MAMSTMRGFAGSIASHTYSGFLNKTTAANARNFRTTLIRRVGAVPNAADLLKHSKIITNA NNQPPCEITTLKNGLRVASVWMPGNSTTVGVWIDSGSRFETKETNGAAHFLEHMIFKGTK NRSRLELEEEIEQKGAHLNAYTAREQTGYYARCFNKDVPWCTELLSDILQNSLIEPSQME AEKHVILREMEEVEKSTEEVIFDRLHMTAFRDSSLGFTILGPVENIQNMKREYLVDYIQK NYTADRMVFCCVGNVEHDKVVELAEKHLCTVSQCCATPMTQQIPQGTGKVQLEKPYFVGS ELLNRNDDMGPHAYLAVAFEGVSWTNPDSVCFMLMQSIIGSYKKNQEGIVPGKVSGNKTV HAIANRMTVGCAEAFSAFNTCYKDTGLFGFYAQCDEVAVDHCVGELMFGVTSMSYSITDE EVERAKRQLMLQFLSMNDSTSTVAEEVARQIIVYGRRMPVTEFLLRLEQIDAEEVKRVAW KYLHDHEVAVTAMGPLHGMPSLIDIRQKTYWLRY

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
BBOV_IV001260196 SEVEKSTEEV0.993unspBBOV_IV001260416 SSMSYSITDE0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India