BBOV_IV001950 | methionine aminopeptidase I, putative

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_IDPredictionOTHERSPmTPCS_Position
BBOV_IV001950SP0.0478190.8835780.068604CS pos: 17-18. YNA-NV. Pr: 0.4576
No Results

  • Fasta :-

    >BBOV_IV001950 MILPFVALVAALSTYNANVVLVGSICRVYGNASPRCYFHGLAPQPRHLGFLSQCSPRGLQ NSHQANKRNVNAIYSQKHILDKERYIRRPKPEGFGIKKKKTPEPKSNRTKEIVDDFAKQY PSASIKELWEHYEFTGPIKKGIVTGRLLPGKNIKRPNYYASGLPKYVDYPRDVDYRGEHD PRGTIKTDSEIAGIRYACRIAREVLDSVSPLIVEGMFTDYIDRHIHRMCRLKKVYPSPLN YHGFPKSVCTSINEIVCHGIPDSTVLAAGDIINVDVTVYADGFHGDVSETFMVLPAEDPK KLASMNHDIGMYERNKLRYNAKFHDNLWDSGATVMTELNILQCMDTAVRRLGPQDGWEEW FDMLYTGDPGRRPIFGTKNNDDLDPVAKRIMPDIEAWYTANEAVTYKGRVVGVVESQIPT YIAPPGQPKRYATLENPEVIHHIFNRVDPDRRKKPYLFTHTFKEDIELMQITHDAMMKAI AICAPGVPISRIGDVISDHVEQYGFRVVPNLVGHGIGRNFHENPIIEHTRNQSEVVMEPG MVFTIEPIVTRSMDCEVITWPDGWTMATSDARKTAQFEHTVLITDHGHEILTQRLPSSPP LIWNTDLQVMY
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_IV001950.fa Sequence name : BBOV_IV001950 Sequence length : 611 VALUES OF COMPUTED PARAMETERS Coef20 : 4.549 CoefTot : -2.353 ChDiff : 0 ZoneTo : 80 KR : 7 DE : 0 CleavSite : 67 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.547 1.753 0.170 0.623 MesoH : -0.479 0.288 -0.329 0.246 MuHd_075 : 30.707 21.323 9.671 6.830 MuHd_095 : 36.310 21.431 10.733 8.001 MuHd_100 : 40.289 23.157 11.750 9.144 MuHd_105 : 36.109 21.930 10.928 8.244 Hmax_075 : 5.200 14.933 0.089 3.520 Hmax_095 : 5.000 4.600 0.986 1.830 Hmax_100 : 4.600 4.300 0.630 2.360 Hmax_105 : 3.267 4.100 1.316 2.170 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.1336 0.8664 DFMC : 0.0397 0.9603 This protein is probably imported in mitochondria. f(Ser) = 0.0875 f(Arg) = 0.0625 CMi = 0.55556 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 611 BBOV_IV001950 MILPFVALVAALSTYNANVVLVGSICRVYGNASPRCYFHGLAPQPRHLGFLSQCSPRGLQNSHQANKRNVNAIYSQKHIL 80 DKERYIRRPKPEGFGIKKKKTPEPKSNRTKEIVDDFAKQYPSASIKELWEHYEFTGPIKKGIVTGRLLPGKNIKRPNYYA 160 SGLPKYVDYPRDVDYRGEHDPRGTIKTDSEIAGIRYACRIAREVLDSVSPLIVEGMFTDYIDRHIHRMCRLKKVYPSPLN 240 YHGFPKSVCTSINEIVCHGIPDSTVLAAGDIINVDVTVYADGFHGDVSETFMVLPAEDPKKLASMNHDIGMYERNKLRYN 320 AKFHDNLWDSGATVMTELNILQCMDTAVRRLGPQDGWEEWFDMLYTGDPGRRPIFGTKNNDDLDPVAKRIMPDIEAWYTA 400 NEAVTYKGRVVGVVESQIPTYIAPPGQPKRYATLENPEVIHHIFNRVDPDRRKKPYLFTHTFKEDIELMQITHDAMMKAI 480 AICAPGVPISRIGDVISDHVEQYGFRVVPNLVGHGIGRNFHENPIIEHTRNQSEVVMEPGMVFTIEPIVTRSMDCEVITW 560 PDGWTMATSDARKTAQFEHTVLITDHGHEILTQRLPSSPPLIWNTDLQVMY 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_IV001950 27 LVGSICR|VY 0.081 . BBOV_IV001950 35 YGNASPR|CY 0.133 . BBOV_IV001950 46 GLAPQPR|HL 0.121 . BBOV_IV001950 57 LSQCSPR|GL 0.130 . BBOV_IV001950 67 NSHQANK|RN 0.062 . BBOV_IV001950 68 SHQANKR|NV 0.323 . BBOV_IV001950 77 NAIYSQK|HI 0.075 . BBOV_IV001950 82 QKHILDK|ER 0.062 . BBOV_IV001950 84 HILDKER|YI 0.100 . BBOV_IV001950 87 DKERYIR|RP 0.190 . BBOV_IV001950 88 KERYIRR|PK 0.143 . BBOV_IV001950 90 RYIRRPK|PE 0.140 . BBOV_IV001950 97 PEGFGIK|KK 0.061 . BBOV_IV001950 98 EGFGIKK|KK 0.087 . BBOV_IV001950 99 GFGIKKK|KT 0.091 . BBOV_IV001950 100 FGIKKKK|TP 0.117 . BBOV_IV001950 105 KKTPEPK|SN 0.101 . BBOV_IV001950 108 PEPKSNR|TK 0.090 . BBOV_IV001950 110 PKSNRTK|EI 0.077 . BBOV_IV001950 118 IVDDFAK|QY 0.058 . BBOV_IV001950 126 YPSASIK|EL 0.078 . BBOV_IV001950 139 EFTGPIK|KG 0.057 . BBOV_IV001950 140 FTGPIKK|GI 0.109 . BBOV_IV001950 146 KGIVTGR|LL 0.085 . BBOV_IV001950 151 GRLLPGK|NI 0.061 . BBOV_IV001950 154 LPGKNIK|RP 0.060 . BBOV_IV001950 155 PGKNIKR|PN 0.122 . BBOV_IV001950 165 YASGLPK|YV 0.101 . BBOV_IV001950 171 KYVDYPR|DV 0.148 . BBOV_IV001950 176 PRDVDYR|GE 0.121 . BBOV_IV001950 182 RGEHDPR|GT 0.101 . BBOV_IV001950 186 DPRGTIK|TD 0.075 . BBOV_IV001950 195 SEIAGIR|YA 0.108 . BBOV_IV001950 199 GIRYACR|IA 0.148 . BBOV_IV001950 202 YACRIAR|EV 0.400 . BBOV_IV001950 223 FTDYIDR|HI 0.076 . BBOV_IV001950 227 IDRHIHR|MC 0.090 . BBOV_IV001950 230 HIHRMCR|LK 0.202 . BBOV_IV001950 232 HRMCRLK|KV 0.095 . BBOV_IV001950 233 RMCRLKK|VY 0.222 . BBOV_IV001950 246 NYHGFPK|SV 0.195 . BBOV_IV001950 300 LPAEDPK|KL 0.068 . BBOV_IV001950 301 PAEDPKK|LA 0.118 . BBOV_IV001950 314 DIGMYER|NK 0.070 . BBOV_IV001950 316 GMYERNK|LR 0.058 . BBOV_IV001950 318 YERNKLR|YN 0.100 . BBOV_IV001950 322 KLRYNAK|FH 0.080 . BBOV_IV001950 349 CMDTAVR|RL 0.086 . BBOV_IV001950 350 MDTAVRR|LG 0.103 . BBOV_IV001950 371 YTGDPGR|RP 0.074 . BBOV_IV001950 372 TGDPGRR|PI 0.125 . BBOV_IV001950 378 RPIFGTK|NN 0.067 . BBOV_IV001950 388 DLDPVAK|RI 0.068 . BBOV_IV001950 389 LDPVAKR|IM 0.194 . BBOV_IV001950 407 NEAVTYK|GR 0.067 . BBOV_IV001950 409 AVTYKGR|VV 0.172 . BBOV_IV001950 429 APPGQPK|RY 0.064 . BBOV_IV001950 430 PPGQPKR|YA 0.284 . BBOV_IV001950 446 IHHIFNR|VD 0.090 . BBOV_IV001950 451 NRVDPDR|RK 0.114 . BBOV_IV001950 452 RVDPDRR|KK 0.089 . BBOV_IV001950 453 VDPDRRK|KP 0.069 . BBOV_IV001950 454 DPDRRKK|PY 0.182 . BBOV_IV001950 463 LFTHTFK|ED 0.060 . BBOV_IV001950 478 THDAMMK|AI 0.074 . BBOV_IV001950 491 PGVPISR|IG 0.076 . BBOV_IV001950 506 VEQYGFR|VV 0.090 . BBOV_IV001950 518 VGHGIGR|NF 0.094 . BBOV_IV001950 530 PIIEHTR|NQ 0.112 . BBOV_IV001950 551 IEPIVTR|SM 0.129 . BBOV_IV001950 572 MATSDAR|KT 0.115 . BBOV_IV001950 573 ATSDARK|TA 0.095 . BBOV_IV001950 594 HEILTQR|LP 0.073 . ____________________________^_________________

  • Fasta :-

    >BBOV_IV001950 ATGATACTACCCTTTGTGGCACTGGTTGCTGCGTTAAGTACTTATAATGCCAATGTAGTG CTTGTGGGATCGATTTGCAGGGTCTATGGCAATGCATCACCCAGGTGTTATTTCCATGGG TTAGCTCCTCAACCTAGACATCTAGGATTCCTATCGCAATGTAGTCCTAGAGGACTCCAA AACAGTCACCAGGCCAATAAACGTAACGTAAATGCCATTTACAGTCAAAAGCATATCTTG GACAAGGAGCGTTACATACGCAGGCCTAAACCAGAAGGGTTTGGTATAAAAAAAAAGAAG ACCCCCGAACCTAAATCCAATCGCACCAAAGAGATAGTTGATGACTTCGCCAAGCAATAT CCTAGCGCTAGTATTAAGGAGTTATGGGAGCATTATGAATTCACCGGTCCTATTAAAAAG GGTATTGTCACTGGCAGGCTGCTTCCCGGTAAAAACATAAAACGCCCAAACTACTATGCT AGCGGTTTGCCTAAATATGTGGACTATCCCAGGGATGTCGACTATCGCGGGGAGCACGAC CCTCGCGGTACTATAAAGACGGATTCCGAGATAGCGGGCATACGCTATGCGTGTCGCATA GCACGGGAAGTCCTGGATTCAGTGTCACCCTTGATTGTCGAAGGCATGTTCACGGATTAC ATTGACCGGCACATACATCGTATGTGCCGGTTAAAGAAGGTATACCCGTCGCCATTAAAT TACCACGGGTTCCCCAAATCAGTTTGTACATCAATCAATGAGATTGTGTGCCATGGCATA CCCGACTCAACAGTGCTTGCAGCGGGAGACATTATAAACGTTGATGTAACGGTCTATGCC GATGGGTTCCATGGCGATGTCTCGGAGACCTTTATGGTCCTACCAGCAGAAGACCCAAAG AAGCTGGCTTCTATGAACCATGATATTGGAATGTATGAACGTAACAAACTGCGGTACAAT GCCAAATTCCACGATAATCTCTGGGATTCCGGAGCTACCGTGATGACCGAATTGAACATA CTGCAGTGTATGGACACTGCAGTAAGGCGATTAGGGCCTCAGGATGGCTGGGAAGAGTGG TTTGATATGCTCTATACAGGCGATCCAGGACGAAGGCCAATATTTGGCACTAAGAACAAT GATGACCTGGACCCTGTTGCCAAGAGGATAATGCCAGATATAGAGGCGTGGTACACCGCA AATGAAGCGGTTACCTATAAAGGACGAGTTGTAGGTGTTGTGGAATCGCAAATACCAACT TATATCGCCCCTCCGGGGCAACCTAAGCGGTATGCCACCCTAGAGAACCCAGAGGTGATA CACCATATATTCAATAGAGTTGACCCCGATAGAAGAAAGAAACCATACCTCTTCACGCAT ACATTCAAGGAGGACATCGAGCTAATGCAAATAACACATGACGCCATGATGAAAGCAATT GCCATATGCGCACCAGGGGTACCGATAAGTCGAATAGGCGATGTTATATCAGACCACGTG GAACAATATGGATTCAGGGTTGTGCCAAACCTGGTTGGACATGGTATAGGTCGTAATTTC CATGAAAATCCAATCATTGAACATACGCGAAACCAAAGTGAGGTTGTTATGGAACCTGGT ATGGTATTCACCATAGAACCTATCGTCACGCGTAGTATGGATTGTGAAGTTATCACGTGG CCTGATGGATGGACCATGGCCACCTCAGATGCAAGGAAGACCGCTCAATTCGAGCACACA GTGCTAATAACGGACCATGGCCATGAAATACTAACGCAGAGATTACCGTCGTCACCGCCA TTGATATGGAATACTGATTTACAGGTCATGTATTAG
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  • Fasta :-

    MILPFVALVAALSTYNANVVLVGSICRVYGNASPRCYFHGLAPQPRHLGFLSQCSPRGLQ NSHQANKRNVNAIYSQKHILDKERYIRRPKPEGFGIKKKKTPEPKSNRTKEIVDDFAKQY PSASIKELWEHYEFTGPIKKGIVTGRLLPGKNIKRPNYYASGLPKYVDYPRDVDYRGEHD PRGTIKTDSEIAGIRYACRIAREVLDSVSPLIVEGMFTDYIDRHIHRMCRLKKVYPSPLN YHGFPKSVCTSINEIVCHGIPDSTVLAAGDIINVDVTVYADGFHGDVSETFMVLPAEDPK KLASMNHDIGMYERNKLRYNAKFHDNLWDSGATVMTELNILQCMDTAVRRLGPQDGWEEW FDMLYTGDPGRRPIFGTKNNDDLDPVAKRIMPDIEAWYTANEAVTYKGRVVGVVESQIPT YIAPPGQPKRYATLENPEVIHHIFNRVDPDRRKKPYLFTHTFKEDIELMQITHDAMMKAI AICAPGVPISRIGDVISDHVEQYGFRVVPNLVGHGIGRNFHENPIIEHTRNQSEVVMEPG MVFTIEPIVTRSMDCEVITWPDGWTMATSDARKTAQFEHTVLITDHGHEILTQRLPSSPP LIWNTDLQVMY

  • title: active site
  • coordinates: H258,D275,D286,H514,E546,E578
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India