BBOV_IV005690 | hypothetical protein

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_IDPredictionOTHERSPmTPCS_Position
BBOV_IV005690OTHER0.9989540.0002480.000798
No Results

  • Fasta :-

    >BBOV_IV005690 MFPTKAGHKIAAYYVKHRHGNAEDIGDVACSLMNRIAKWNANVFLYDYSEAAYDYLTSVL GGILDVECLYIIGVNPHTIVAYGRSIGSGPTVHIALKRSVLGVVLQSPISSVYKVKVYRL PCTIPGDMFRNEDKVDRINVPTLILHGTKDNVVPISISQSMALTMQRVYGRWINGAGHDD MDTTFALYVDQALQEFYDIICPRTTISNIPKDTAT
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_IV005690.fa Sequence name : BBOV_IV005690 Sequence length : 215 VALUES OF COMPUTED PARAMETERS Coef20 : 3.220 CoefTot : -1.558 ChDiff : 0 ZoneTo : 22 KR : 4 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.788 1.747 0.234 0.645 MesoH : -0.006 0.712 -0.139 0.335 MuHd_075 : 24.888 22.230 7.499 6.070 MuHd_095 : 21.238 15.931 8.312 4.367 MuHd_100 : 18.104 9.117 7.544 3.755 MuHd_105 : 21.430 6.329 7.219 4.636 Hmax_075 : 4.083 12.017 -0.400 3.360 Hmax_095 : 2.400 6.912 -0.422 2.640 Hmax_100 : 1.100 -1.500 -2.014 2.740 Hmax_105 : 3.000 -0.900 -1.711 2.430 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8680 0.1320 DFMC : 0.9394 0.0606
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 215 BBOV_IV005690 MFPTKAGHKIAAYYVKHRHGNAEDIGDVACSLMNRIAKWNANVFLYDYSEAAYDYLTSVLGGILDVECLYIIGVNPHTIV 80 AYGRSIGSGPTVHIALKRSVLGVVLQSPISSVYKVKVYRLPCTIPGDMFRNEDKVDRINVPTLILHGTKDNVVPISISQS 160 MALTMQRVYGRWINGAGHDDMDTTFALYVDQALQEFYDIICPRTTISNIPKDTAT 240 ................................................................................ 80 ................................................................................ 160 ....................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_IV005690 5 --MFPTK|AG 0.066 . BBOV_IV005690 9 PTKAGHK|IA 0.062 . BBOV_IV005690 16 IAAYYVK|HR 0.070 . BBOV_IV005690 18 AYYVKHR|HG 0.093 . BBOV_IV005690 35 ACSLMNR|IA 0.109 . BBOV_IV005690 38 LMNRIAK|WN 0.149 . BBOV_IV005690 84 TIVAYGR|SI 0.243 . BBOV_IV005690 97 TVHIALK|RS 0.057 . BBOV_IV005690 98 VHIALKR|SV 0.412 . BBOV_IV005690 114 PISSVYK|VK 0.064 . BBOV_IV005690 116 SSVYKVK|VY 0.061 . BBOV_IV005690 119 YKVKVYR|LP 0.101 . BBOV_IV005690 130 IPGDMFR|NE 0.108 . BBOV_IV005690 134 MFRNEDK|VD 0.065 . BBOV_IV005690 137 NEDKVDR|IN 0.079 . BBOV_IV005690 149 LILHGTK|DN 0.060 . BBOV_IV005690 167 MALTMQR|VY 0.090 . BBOV_IV005690 171 MQRVYGR|WI 0.141 . BBOV_IV005690 203 YDIICPR|TT 0.090 . BBOV_IV005690 211 TISNIPK|DT 0.104 . ____________________________^_________________

  • Fasta :-

    >BBOV_IV005690 ATGTTCCCAACAAAAGCTGGGCACAAGATTGCCGCGTATTATGTGAAGCATCGCCATGGT AATGCAGAAGACATTGGTGATGTGGCTTGCAGTCTCATGAACCGCATTGCAAAATGGAAT GCAAATGTATTTTTGTATGATTACTCTGAAGCAGCGTATGATTATCTCACTTCTGTACTT GGTGGGATATTAGATGTAGAATGTTTATATATAATAGGTGTTAATCCTCATACTATAGTA GCATATGGTAGGAGCATAGGCAGTGGTCCCACTGTCCACATAGCATTGAAACGTAGTGTC CTAGGAGTTGTACTGCAAAGTCCCATTTCTTCCGTATATAAAGTAAAAGTATATCGACTT CCGTGCACAATACCAGGTGACATGTTTAGAAATGAAGATAAAGTAGATAGAATTAATGTA CCAACATTAATTCTTCACGGTACAAAGGATAATGTCGTTCCAATATCAATATCGCAAAGT ATGGCTCTAACAATGCAACGCGTATATGGCAGATGGATAAATGGTGCTGGCCATGATGAT ATGGATACAACATTTGCATTATATGTAGATCAGGCTCTCCAAGAATTTTATGATATAATT TGCCCTAGGACAACCATATCAAATATTCCGAAGGATACAGCAACTTAA
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  • Fasta :-

    MFPTKAGHKIAAYYVKHRHGNAEDIGDVACSLMNRIAKWNANVFLYDYSEAAYDYLTSVL GGILDVECLYIIGVNPHTIVAYGRSIGSGPTVHIALKRSVLGVVLQSPISSVYKVKVYRL PCTIPGDMFRNEDKVDRINVPTLILHGTKDNVVPISISQSMALTMQRVYGRWINGAGHDD MDTTFALYVDQALQEFYDIICPRTTISNIPKDTAT

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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India