BBOV_IV006760 | methionine aminopeptidase, putative

_IDPredictionOTHERSPmTPCS_Position
BBOV_IV006760OTHER0.9993370.0001510.000511
No Results

  • Fasta :-

    >BBOV_IV006760 MSAARVCCGCGLDTESTLACPVCKSKGDIQIFCSQGCFGANWKSHSAKHKEDTSGSVSSG DLDLNDPHLRRFKNFKFTGELRPWPVTPQKRVPSHISCPDYALDGEPKSEVNLKNAGRIV VNTPEQIKLIRKASILGRKALDFAASLIAPGVTTDEIDTKVHDFIIQHNAYPSPLNYYGF PKSLCTSVNEVVCHGIPDKRPLKDGDIINIDISVYLNGVHSDLNATYFVGEVDEDSRRLV KGTYMALMEAIKQCKPGMYYREIGNIINKVADEYRLSVVRTYCGHGVGQDFHSLPNVPHY RNSKAIGILRPGHIFTIEPMLNLGTWRDCKWPDDWTAVTVDGKRSAQFEHTLLVTETGVE ILTKPLGSSPPLQFDV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_IV006760.fa Sequence name : BBOV_IV006760 Sequence length : 376 VALUES OF COMPUTED PARAMETERS Coef20 : 4.372 CoefTot : 0.151 ChDiff : 0 ZoneTo : 12 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.459 1.076 0.359 0.457 MesoH : -0.829 0.142 -0.428 0.176 MuHd_075 : 19.245 10.270 5.311 3.561 MuHd_095 : 15.605 10.369 5.546 3.739 MuHd_100 : 17.992 10.730 6.104 3.708 MuHd_105 : 17.756 8.089 5.912 2.689 Hmax_075 : 12.425 10.200 4.181 2.800 Hmax_095 : 12.250 11.287 4.533 3.194 Hmax_100 : 13.400 13.400 5.057 3.490 Hmax_105 : 14.000 11.400 4.715 3.370 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6604 0.3396 DFMC : 0.8056 0.1944
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 376 BBOV_IV006760 MSAARVCCGCGLDTESTLACPVCKSKGDIQIFCSQGCFGANWKSHSAKHKEDTSGSVSSGDLDLNDPHLRRFKNFKFTGE 80 LRPWPVTPQKRVPSHISCPDYALDGEPKSEVNLKNAGRIVVNTPEQIKLIRKASILGRKALDFAASLIAPGVTTDEIDTK 160 VHDFIIQHNAYPSPLNYYGFPKSLCTSVNEVVCHGIPDKRPLKDGDIINIDISVYLNGVHSDLNATYFVGEVDEDSRRLV 240 KGTYMALMEAIKQCKPGMYYREIGNIINKVADEYRLSVVRTYCGHGVGQDFHSLPNVPHYRNSKAIGILRPGHIFTIEPM 320 LNLGTWRDCKWPDDWTAVTVDGKRSAQFEHTLLVTETGVEILTKPLGSSPPLQFDV 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ........................................................ 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_IV006760 5 --MSAAR|VC 0.088 . BBOV_IV006760 24 LACPVCK|SK 0.115 . BBOV_IV006760 26 CPVCKSK|GD 0.079 . BBOV_IV006760 43 CFGANWK|SH 0.078 . BBOV_IV006760 48 WKSHSAK|HK 0.123 . BBOV_IV006760 50 SHSAKHK|ED 0.085 . BBOV_IV006760 70 LNDPHLR|RF 0.076 . BBOV_IV006760 71 NDPHLRR|FK 0.144 . BBOV_IV006760 73 PHLRRFK|NF 0.089 . BBOV_IV006760 76 RRFKNFK|FT 0.117 . BBOV_IV006760 82 KFTGELR|PW 0.069 . BBOV_IV006760 90 WPVTPQK|RV 0.071 . BBOV_IV006760 91 PVTPQKR|VP 0.122 . BBOV_IV006760 108 ALDGEPK|SE 0.066 . BBOV_IV006760 114 KSEVNLK|NA 0.092 . BBOV_IV006760 118 NLKNAGR|IV 0.109 . BBOV_IV006760 128 NTPEQIK|LI 0.059 . BBOV_IV006760 131 EQIKLIR|KA 0.105 . BBOV_IV006760 132 QIKLIRK|AS 0.079 . BBOV_IV006760 138 KASILGR|KA 0.113 . BBOV_IV006760 139 ASILGRK|AL 0.080 . BBOV_IV006760 160 TDEIDTK|VH 0.067 . BBOV_IV006760 182 NYYGFPK|SL 0.101 . BBOV_IV006760 199 CHGIPDK|RP 0.058 . BBOV_IV006760 200 HGIPDKR|PL 0.169 . BBOV_IV006760 203 PDKRPLK|DG 0.140 . BBOV_IV006760 237 EVDEDSR|RL 0.071 . BBOV_IV006760 238 VDEDSRR|LV 0.144 . BBOV_IV006760 241 DSRRLVK|GT 0.177 . BBOV_IV006760 252 ALMEAIK|QC 0.062 . BBOV_IV006760 255 EAIKQCK|PG 0.062 . BBOV_IV006760 261 KPGMYYR|EI 0.155 . BBOV_IV006760 269 IGNIINK|VA 0.072 . BBOV_IV006760 275 KVADEYR|LS 0.072 . BBOV_IV006760 280 YRLSVVR|TY 0.091 . BBOV_IV006760 301 PNVPHYR|NS 0.098 . BBOV_IV006760 304 PHYRNSK|AI 0.180 . BBOV_IV006760 310 KAIGILR|PG 0.076 . BBOV_IV006760 327 LNLGTWR|DC 0.095 . BBOV_IV006760 330 GTWRDCK|WP 0.120 . BBOV_IV006760 343 AVTVDGK|RS 0.065 . BBOV_IV006760 344 VTVDGKR|SA 0.207 . BBOV_IV006760 364 GVEILTK|PL 0.074 . ____________________________^_________________

  • Fasta :-

    >BBOV_IV006760 ATGAGTGCGGCACGTGTCTGTTGCGGGTGTGGTTTGGATACTGAGAGTACCTTGGCTTGT CCTGTTTGCAAATCAAAGGGTGATATACAAATCTTTTGTTCACAAGGTTGTTTCGGTGCT AATTGGAAGTCCCACAGCGCCAAACATAAGGAGGATACATCTGGTTCTGTTTCCTCTGGC GATTTGGATCTTAATGACCCTCATTTAAGGCGTTTTAAGAATTTTAAATTTACTGGGGAA TTACGTCCTTGGCCTGTTACTCCTCAGAAGCGTGTTCCATCTCATATATCATGTCCTGAC TATGCATTGGATGGCGAGCCTAAATCGGAGGTGAACTTAAAGAATGCTGGTCGCATTGTG GTGAATACCCCTGAACAAATAAAGTTGATACGCAAGGCATCTATTTTAGGTCGCAAAGCA TTGGATTTTGCTGCTAGTTTAATCGCTCCAGGTGTGACCACGGATGAAATAGATACTAAG GTTCACGATTTCATTATACAGCACAACGCTTATCCATCTCCTTTGAACTACTATGGTTTC CCCAAATCACTATGCACATCTGTTAACGAGGTTGTATGTCACGGGATACCAGACAAGAGA CCTCTTAAAGACGGCGATATAATCAATATCGACATATCTGTTTACTTGAATGGCGTTCAT AGTGATTTGAATGCTACTTACTTTGTTGGTGAGGTTGATGAAGATTCTCGTCGTCTTGTA AAGGGCACATATATGGCTTTAATGGAGGCCATAAAGCAATGCAAGCCTGGGATGTACTAT CGCGAGATTGGCAATATAATAAACAAGGTTGCTGATGAATACAGGTTATCTGTGGTTCGT ACTTACTGTGGTCATGGCGTGGGTCAAGATTTCCATTCGCTTCCTAATGTTCCACATTAT CGCAACAGCAAGGCGATTGGCATTTTACGTCCTGGTCACATTTTTACTATCGAGCCAATG TTGAACCTCGGAACGTGGAGGGACTGCAAATGGCCAGATGATTGGACGGCTGTTACTGTG GATGGCAAGAGATCCGCTCAGTTTGAGCATACTTTATTAGTGACTGAAACAGGTGTTGAA ATATTGACTAAACCTTTGGGTTCTTCACCACCTCTTCAATTTGATGTGTAG
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  • Fasta :-

    MSAARVCCGCGLDTESTLACPVCKSKGDIQIFCSQGCFGANWKSHSAKHKEDTSGSVSSG DLDLNDPHLRRFKNFKFTGELRPWPVTPQKRVPSHISCPDYALDGEPKSEVNLKNAGRIV VNTPEQIKLIRKASILGRKALDFAASLIAPGVTTDEIDTKVHDFIIQHNAYPSPLNYYGF PKSLCTSVNEVVCHGIPDKRPLKDGDIINIDISVYLNGVHSDLNATYFVGEVDEDSRRLV KGTYMALMEAIKQCKPGMYYREIGNIINKVADEYRLSVVRTYCGHGVGQDFHSLPNVPHY RNSKAIGILRPGHIFTIEPMLNLGTWRDCKWPDDWTAVTVDGKRSAQFEHTLLVTETGVE ILTKPLGSSPPLQFDV

    No Results
  • title: active site
  • coordinates: H194,D211,D222,H285,E318,E349
No Results
No Results
IDSitePeptideScoreMethod
BBOV_IV00676058 SSGSVSSGDL0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India