BBOV_IV007800 | proteasome subunit alpha, putative

UniProt_ID: A7ARG5

Computed_GO_Component_IDs: GO:0005839 GO:0019773
Computed_GO_Components: proteasome core complex proteasome core complex, alpha-subunit complex
Computed_GO_Function_IDs: GO:0004175 GO:0004298
Computed_GO_Functions: endopeptidase activity threonine-type endopeptidase activity
Computed_GO_Process_IDs: GO:0051603 GO:0006511
Computed_GO_Processes: proteolysis involved in cellular protein catabolic process ubiquitin-dependent protein catabolic process
Curated_GO_Component_IDs:
Curated_GO_Components:
Curated_GO_Function_IDs:
Curated_GO_Functions:
Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	BBOV_IV007800	OTHER	0.999730	0.000257	0.000013

No Results

Fasta :-
>BBOV_IV007800 MSGTAAGYDLSVSTFSPDGHVFQVEYATKAVDTAPTVVGAVCSDGIVFLADSILCGYKHG EDAKSNVLQARPTIRLYAIDEGVGCAVTGMIPDAQCIVRHAKSECKSFFAEYGVKIPVSL LAERVALFVHAYTLYWHVRPFGASMILSGIDSNGEKSLYCIEPSGACYKYAGMAIGKCKH LVKTEMEKFILSGMSCRDALKELSLAIMIGRDEDSGKTNDLQMAWICDESGGEFQMIPED IAAETKADASRRHAAIHGQ
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_IV007800.fa Sequence name : BBOV_IV007800 Sequence length : 259 VALUES OF COMPUTED PARAMETERS Coef20 : 3.352 CoefTot : -0.263 ChDiff : -8 ZoneTo : 8 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.247 1.712 0.287 0.600 MesoH : -0.233 0.565 -0.236 0.280 MuHd_075 : 24.514 16.107 5.394 3.685 MuHd_095 : 8.560 4.390 2.020 1.407 MuHd_100 : 3.854 5.605 0.371 1.053 MuHd_105 : 4.271 4.565 1.315 0.431 Hmax_075 : 16.683 13.300 1.910 4.818 Hmax_095 : 12.400 7.900 0.963 3.590 Hmax_100 : 12.400 7.900 0.963 3.590 Hmax_105 : 8.167 5.100 0.747 3.057 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9805 0.0195 DFMC : 0.9700 0.0300

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 259 BBOV_IV007800 MSGTAAGYDLSVSTFSPDGHVFQVEYATKAVDTAPTVVGAVCSDGIVFLADSILCGYKHGEDAKSNVLQARPTIRLYAID 80 EGVGCAVTGMIPDAQCIVRHAKSECKSFFAEYGVKIPVSLLAERVALFVHAYTLYWHVRPFGASMILSGIDSNGEKSLYC 160 IEPSGACYKYAGMAIGKCKHLVKTEMEKFILSGMSCRDALKELSLAIMIGRDEDSGKTNDLQMAWICDESGGEFQMIPED 240 IAAETKADASRRHAAIHGQ 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_IV007800 29 QVEYATK|AV 0.091 . BBOV_IV007800 58 SILCGYK|HG 0.064 . BBOV_IV007800 64 KHGEDAK|SN 0.076 . BBOV_IV007800 71 SNVLQAR|PT 0.109 . BBOV_IV007800 75 QARPTIR|LY 0.097 . BBOV_IV007800 99 DAQCIVR|HA 0.104 . BBOV_IV007800 102 CIVRHAK|SE 0.336 . BBOV_IV007800 106 HAKSECK|SF 0.088 . BBOV_IV007800 115 FAEYGVK|IP 0.054 . BBOV_IV007800 124 VSLLAER|VA 0.069 . BBOV_IV007800 139 TLYWHVR|PF 0.147 . BBOV_IV007800 156 IDSNGEK|SL 0.112 . BBOV_IV007800 169 PSGACYK|YA 0.102 . BBOV_IV007800 177 AGMAIGK|CK 0.063 . BBOV_IV007800 179 MAIGKCK|HL 0.082 . BBOV_IV007800 183 KCKHLVK|TE 0.062 . BBOV_IV007800 188 VKTEMEK|FI 0.065 . BBOV_IV007800 197 LSGMSCR|DA 0.176 . BBOV_IV007800 201 SCRDALK|EL 0.068 . BBOV_IV007800 211 LAIMIGR|DE 0.105 . BBOV_IV007800 217 RDEDSGK|TN 0.075 . BBOV_IV007800 246 DIAAETK|AD 0.061 . BBOV_IV007800 251 TKADASR|RH 0.098 . BBOV_IV007800 252 KADASRR|HA 0.205 . ____________________________^_________________

Fasta :-
>BBOV_IV007800 ATGTCTGGCACGGCAGCTGGTTATGATTTATCGGTTTCTACCTTTTCTCCGGATGGTCAC GTGTTCCAGGTTGAATACGCTACAAAGGCTGTAGACACTGCACCTACAGTCGTTGGCGCT GTTTGTAGCGACGGAATAGTATTTTTAGCGGATTCAATTTTATGCGGTTACAAACATGGC GAAGACGCAAAGAGCAACGTATTACAGGCGCGGCCTACGATTCGTTTGTACGCTATTGAC GAGGGTGTCGGATGCGCTGTAACAGGTATGATTCCTGATGCACAATGCATCGTGCGTCAC GCTAAATCGGAGTGCAAATCTTTTTTTGCTGAGTATGGCGTAAAGATTCCCGTTTCTCTA TTGGCTGAGAGAGTTGCTTTATTCGTCCACGCTTACACATTATATTGGCACGTTCGTCCT TTTGGTGCGTCTATGATCCTTTCGGGTATAGACAGCAATGGAGAGAAATCACTCTATTGC ATTGAGCCCAGCGGTGCGTGTTACAAGTATGCTGGTATGGCTATCGGAAAGTGCAAGCAT CTGGTTAAGACAGAGATGGAGAAGTTCATTTTATCGGGTATGTCCTGTCGGGACGCTTTG AAGGAGTTATCGTTGGCCATCATGATAGGTCGTGATGAAGATTCCGGTAAGACTAACGAT TTGCAAATGGCGTGGATTTGTGATGAGAGCGGTGGTGAATTCCAGATGATACCTGAAGAT ATAGCTGCTGAAACTAAGGCCGATGCTTCTAGGCGCCACGCTGCCATCCATGGCCAATGA GCGCGTGTGTTACTCCTTAACTACTGATCGCATTGGTACCCGTTATTGTAATAGAAAAGT GTGTATATCGTTTCCTCTAGAGTCCACTAACACACCGATTACAAACCTCTTTAATGTAGA TAGCATAAGGGA
Download Fasta

Fasta :-

MSGTAAGYDLSVSTFSPDGHVFQVEYATKAVDTAPTVVGAVCSDGIVFLADSILCGYKHG EDAKSNVLQARPTIRLYAIDEGVGCAVTGMIPDAQCIVRHAKSECKSFFAEYGVKIPVSL LAERVALFVHAYTLYWHVRPFGASMILSGIDSNGEKSLYCIEPSGACYKYAGMAIGKCKH LVKTEMEKFILSGMSCRDALKELSLAIMIGRDEDSGKTNDLQMAWICDESGGEFQMIPED IAAETKADASRRHAAIHGQ

Proteasome subunits

title: active site
coordinates: P35,D51,I53,R75

No Results

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	BBOV_IV007800	195 S	LSGMSCRDA	0.996	unsp	BBOV_IV007800	215 S	RDEDSGKTN	0.993	unsp

BBOV_IV007800 | proteasome subunit alpha, putative

ID's

UniProt_ID: A7ARG5

GEO Functions

Computed_GO_Component_IDs: GO:0005839 GO:0019773

Computed_GO_Components: proteasome core complex proteasome core complex, alpha-subunit complex

Computed_GO_Function_IDs: GO:0004175 GO:0004298

Computed_GO_Functions: endopeptidase activity threonine-type endopeptidase activity

Computed_GO_Process_IDs: GO:0051603 GO:0006511

Computed_GO_Processes: proteolysis involved in cellular protein catabolic process ubiquitin-dependent protein catabolic process

Curated_GO_Component_IDs:

Curated_GO_Components:

Curated_GO_Function_IDs:

Curated_GO_Functions:

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Proteasome subunits

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India