BBOV_IV007890 | aspartyl protease, putative

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_IDPredictionOTHERSPmTPCS_Position
BBOV_IV007890SP0.3584700.6316370.009893CS pos: 24-25. AKA-DM. Pr: 0.9338
No Results

  • Fasta :-

    >BBOV_IV007890 MNIWNVKYIAGTTAIWLVSRYAKADMERQTDICVDHNSNNQHISPYYDDEDICLHHGNAS EHSITLKRYNRADGLSALQMAEDNHNAFRRGKISFARRSEGSFGSIGYSGSHVSQNALKL MRRSNPKSLSMLSRSEYGKYIPIKETKDSLYIGEIMIGTPPQIVHPIFDTGSTNLWVVGY DCKDPSCLKVARYNTSVSSTFERLKNPVRIHVKFGTGEIEGYPALDTVTIGETVVPKQAL AVVDSENSGTQISNIFNKINFEGIVGLAFPEMSSIPGMPIFDHMALLRNMKHKEFAFYIS NNDKDSKLMLGGVDPQYYTGKIKMFPVVREHYWEVKLDALYVGDEKLCCDGESSYLIFDS GTSLNTVPSSYFDRFISHFKIKTCDDYEVYPTITYVIGGEHIKLEPHQYMLSSNGRCLPA YMQLDVPSEFGNAFIVGSNAFMRHYLTVYHRGSNGSKSMVRDA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_IV007890.fa Sequence name : BBOV_IV007890 Sequence length : 463 VALUES OF COMPUTED PARAMETERS Coef20 : 4.555 CoefTot : -0.125 ChDiff : -3 ZoneTo : 24 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.282 1.129 0.089 0.572 MesoH : -0.275 0.370 -0.340 0.295 MuHd_075 : 16.853 11.426 4.630 3.697 MuHd_095 : 19.335 20.924 6.544 5.266 MuHd_100 : 9.587 14.686 3.414 3.146 MuHd_105 : 21.203 10.435 6.453 5.067 Hmax_075 : 11.725 9.700 2.465 4.690 Hmax_095 : 12.950 19.600 2.713 5.381 Hmax_100 : 9.400 16.400 1.531 4.440 Hmax_105 : 10.800 9.450 1.925 4.807 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0793 0.9207 DFMC : 0.1811 0.8189 This protein is probably imported in mitochondria. f(Ser) = 0.0417 f(Arg) = 0.0417 CMi = 0.32468 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 463 BBOV_IV007890 MNIWNVKYIAGTTAIWLVSRYAKADMERQTDICVDHNSNNQHISPYYDDEDICLHHGNASEHSITLKRYNRADGLSALQM 80 AEDNHNAFRRGKISFARRSEGSFGSIGYSGSHVSQNALKLMRRSNPKSLSMLSRSEYGKYIPIKETKDSLYIGEIMIGTP 160 PQIVHPIFDTGSTNLWVVGYDCKDPSCLKVARYNTSVSSTFERLKNPVRIHVKFGTGEIEGYPALDTVTIGETVVPKQAL 240 AVVDSENSGTQISNIFNKINFEGIVGLAFPEMSSIPGMPIFDHMALLRNMKHKEFAFYISNNDKDSKLMLGGVDPQYYTG 320 KIKMFPVVREHYWEVKLDALYVGDEKLCCDGESSYLIFDSGTSLNTVPSSYFDRFISHFKIKTCDDYEVYPTITYVIGGE 400 HIKLEPHQYMLSSNGRCLPAYMQLDVPSEFGNAFIVGSNAFMRHYLTVYHRGSNGSKSMVRDA 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ............................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_IV007890 7 MNIWNVK|YI 0.067 . BBOV_IV007890 20 AIWLVSR|YA 0.101 . BBOV_IV007890 23 LVSRYAK|AD 0.201 . BBOV_IV007890 28 AKADMER|QT 0.115 . BBOV_IV007890 67 EHSITLK|RY 0.068 . BBOV_IV007890 68 HSITLKR|YN 0.197 . BBOV_IV007890 71 TLKRYNR|AD 0.281 . BBOV_IV007890 89 DNHNAFR|RG 0.081 . BBOV_IV007890 90 NHNAFRR|GK 0.171 . BBOV_IV007890 92 NAFRRGK|IS 0.127 . BBOV_IV007890 97 GKISFAR|RS 0.133 . BBOV_IV007890 98 KISFARR|SE 0.314 . BBOV_IV007890 119 VSQNALK|LM 0.061 . BBOV_IV007890 122 NALKLMR|RS 0.074 . BBOV_IV007890 123 ALKLMRR|SN 0.230 . BBOV_IV007890 127 MRRSNPK|SL 0.105 . BBOV_IV007890 134 SLSMLSR|SE 0.169 . BBOV_IV007890 139 SRSEYGK|YI 0.098 . BBOV_IV007890 144 GKYIPIK|ET 0.086 . BBOV_IV007890 147 IPIKETK|DS 0.081 . BBOV_IV007890 183 VVGYDCK|DP 0.062 . BBOV_IV007890 189 KDPSCLK|VA 0.055 . BBOV_IV007890 192 SCLKVAR|YN 0.117 . BBOV_IV007890 203 VSSTFER|LK 0.117 . BBOV_IV007890 205 STFERLK|NP 0.056 . BBOV_IV007890 209 RLKNPVR|IH 0.084 . BBOV_IV007890 213 PVRIHVK|FG 0.073 . BBOV_IV007890 237 GETVVPK|QA 0.081 . BBOV_IV007890 258 ISNIFNK|IN 0.089 . BBOV_IV007890 288 DHMALLR|NM 0.095 . BBOV_IV007890 291 ALLRNMK|HK 0.123 . BBOV_IV007890 293 LRNMKHK|EF 0.087 . BBOV_IV007890 304 YISNNDK|DS 0.080 . BBOV_IV007890 307 NNDKDSK|LM 0.058 . BBOV_IV007890 321 PQYYTGK|IK 0.059 . BBOV_IV007890 323 YYTGKIK|MF 0.066 . BBOV_IV007890 329 KMFPVVR|EH 0.078 . BBOV_IV007890 336 EHYWEVK|LD 0.058 . BBOV_IV007890 346 LYVGDEK|LC 0.061 . BBOV_IV007890 374 PSSYFDR|FI 0.150 . BBOV_IV007890 380 RFISHFK|IK 0.058 . BBOV_IV007890 382 ISHFKIK|TC 0.102 . BBOV_IV007890 403 IGGEHIK|LE 0.059 . BBOV_IV007890 416 MLSSNGR|CL 0.105 . BBOV_IV007890 443 GSNAFMR|HY 0.137 . BBOV_IV007890 451 YLTVYHR|GS 0.095 . BBOV_IV007890 457 RGSNGSK|SM 0.072 . BBOV_IV007890 461 GSKSMVR|DA 0.141 . ____________________________^_________________

  • Fasta :-

    >BBOV_IV007890 AATTGGAATCTAACATTATTGTTGGGGTTCAGATTAAATCAATTGATGATTCATAGGCTT TAAAATTAAGGTCCGATTAATGCAACATGCCGTTTAAAGTTTTTTAGTTCGATGATCACT CCCACTAATACTAATCCCATGAATAAATAAAAAACTTGTTTGTGGCAGTGTTGTTGTATT GCATCGCCTTTGGGTTCTAAAGGTACTATGGTACTGGGTATGAGTAACACAAACGATTCA AAGATCATTGAGGGCACGCTGTTATGATATGGAGCAACATTGATACAATTACGTTGTAAA TTTATTTCATTGGTCATTATAAGGGCGGATTAAATGTAACTATATTTAGCACATTTCAGA AAGTCAAACATGACCATGATGCCGATCTGTTTCACATATTTTGCTTTATGAAAACGTATT TCCCTGTTAACATTTAATGCGTTCCTGATCATCATATGGACAGTGAGTTTGAGCATGCCA TGAAATACGTACCAACTAATCAAAGATGAATATTTGGAATGTGAAATATATAGCTGGTAC AACAGCAATTTGGCTGGTATCCAGATATGCGAAAGCTGATATGGAACGCCAGACAGATAT CTGCGTTGATCATAACAGCAACAATCAACACATTAGTCCATACTACGATGACGAAGACAT CTGTTTACATCACGGAAACGCATCAGAGCATTCTATAACTTTAAAGCGGTACAATAGAGC TGATGGGCTGTCTGCATTGCAAATGGCCGAGGATAATCACAATGCTTTCAGGAGAGGTAA AATTTCTTTTGCGAGAAGGAGTGAAGGATCTTTCGGATCAATTGGTTACAGTGGAAGTCA CGTCAGTCAAAATGCTTTAAAACTCATGAGAAGATCGAATCCTAAAAGTTTAAGCATGCT CAGCAGATCAGAATATGGGAAATATATACCCATCAAGGAAACGAAAGACAGCCTTTATAT TGGGGAAATCATGATAGGCACCCCTCCACAAATTGTACATCCTATATTTGACACAGGAAG CACAAACTTATGGGTAGTGGGATACGACTGCAAAGATCCATCGTGTCTGAAAGTTGCTCG CTATAATACTTCAGTCTCATCTACTTTTGAACGGCTGAAGAACCCAGTTAGGATACATGT GAAGTTCGGTACTGGTGAAATTGAAGGGTACCCTGCTCTGGATACCGTAACCATAGGAGA AACCGTCGTTCCAAAGCAAGCACTAGCTGTTGTGGATTCAGAGAATTCTGGAACCCAAAT ATCCAATATATTCAACAAGATTAACTTTGAAGGCATAGTTGGTTTGGCATTTCCAGAGAT GAGTAGTATACCCGGAATGCCAATATTTGATCACATGGCTTTGTTAAGAAATATGAAGCA CAAGGAATTTGCATTTTACATAAGCAATAACGATAAGGACTCAAAGCTGATGCTAGGAGG AGTGGATCCTCAGTATTATACAGGAAAGATCAAAATGTTTCCCGTAGTTCGTGAACACTA TTGGGAAGTGAAATTAGATGCACTATATGTGGGAGATGAAAAGCTATGTTGCGACGGAGA ATCATCATATTTAATTTTTGATTCCGGTACTTCACTCAATACGGTTCCCAGCAGTTATTT TGATCGTTTTATATCACATTTCAAGATTAAGACGTGTGATGACTACGAAGTCTACCCGAC CATTACCTATGTGATAGGTGGAGAGCATATAAAGCTTGAACCGCATCAGTACATGCTAAG CAGCAATGGTCGCTGTCTGCCAGCATATATGCAACTCGACGTACCGTCAGAGTTTGGAAA TGCTTTTATTGTTGGATCCAATGCATTCATGAGGCATTACTTGACGGTTTATCATAGAGG TAGCAACGGATCTAAGTCGATGGTTCGTGATGCTTAG
  • Download Fasta

  • Fasta :-

    MNIWNVKYIAGTTAIWLVSRYAKADMERQTDICVDHNSNNQHISPYYDDEDICLHHGNAS EHSITLKRYNRADGLSALQMAEDNHNAFRRGKISFARRSEGSFGSIGYSGSHVSQNALKL MRRSNPKSLSMLSRSEYGKYIPIKETKDSLYIGEIMIGTPPQIVHPIFDTGSTNLWVVGY DCKDPSCLKVARYNTSVSSTFERLKNPVRIHVKFGTGEIEGYPALDTVTIGETVVPKQAL AVVDSENSGTQISNIFNKINFEGIVGLAFPEMSSIPGMPIFDHMALLRNMKHKEFAFYIS NNDKDSKLMLGGVDPQYYTGKIKMFPVVREHYWEVKLDALYVGDEKLCCDGESSYLIFDS GTSLNTVPSSYFDRFISHFKIKTCDDYEVYPTITYVIGGEHIKLEPHQYMLSSNGRCLPA YMQLDVPSEFGNAFIVGSNAFMRHYLTVYHRGSNGSKSMVRDA

  • title: catalytic residue
  • coordinates: D169,D359
No Results
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India