BBOV_IV008660 | proteasome subunit beta 7, putative

_IDPredictionOTHERSPmTPCS_Position
BBOV_IV008660OTHER0.9998440.0000770.000079
No Results

  • Fasta :-

    >BBOV_IV008660 MEFGYVREYMSHQGGWDFSNHSRNARIKDNIKGFKVLKTGTTICGVLVKDGVVLAADTRA TEGPIVADKNCSKLHRISDFIYCAGAGVAADLEHTTLWLENNIELLRLNLKQKPKVQMCV SMLVHELFKYQGYKQCALILGGYDSKGPHLFSISPRGSSDSLPFCTMGSGSLNAMSVLES EYRDGMSISEAVALATKAISAGILNDLGSGGNVDVCVINRDGATHTRAHAVVGTRTYAPI PRSIPPGASCVLREKILSMKEYIVVDSIDVD
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_IV008660.fa Sequence name : BBOV_IV008660 Sequence length : 271 VALUES OF COMPUTED PARAMETERS Coef20 : 3.047 CoefTot : 0.000 ChDiff : 1 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.476 1.471 0.165 0.498 MesoH : -0.203 0.370 -0.227 0.219 MuHd_075 : 38.186 15.585 11.047 5.907 MuHd_095 : 9.036 11.905 4.764 1.045 MuHd_100 : 8.216 8.986 4.203 0.279 MuHd_105 : 2.458 4.721 2.190 1.460 Hmax_075 : 12.483 6.883 1.082 4.200 Hmax_095 : 3.237 4.900 -0.732 2.117 Hmax_100 : 1.100 3.300 -1.534 1.530 Hmax_105 : -1.400 1.167 -3.734 2.420 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9968 0.0032 DFMC : 0.9869 0.0131
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 271 BBOV_IV008660 MEFGYVREYMSHQGGWDFSNHSRNARIKDNIKGFKVLKTGTTICGVLVKDGVVLAADTRATEGPIVADKNCSKLHRISDF 80 IYCAGAGVAADLEHTTLWLENNIELLRLNLKQKPKVQMCVSMLVHELFKYQGYKQCALILGGYDSKGPHLFSISPRGSSD 160 SLPFCTMGSGSLNAMSVLESEYRDGMSISEAVALATKAISAGILNDLGSGGNVDVCVINRDGATHTRAHAVVGTRTYAPI 240 PRSIPPGASCVLREKILSMKEYIVVDSIDVD 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ............................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_IV008660 7 MEFGYVR|EY 0.081 . BBOV_IV008660 23 DFSNHSR|NA 0.119 . BBOV_IV008660 26 NHSRNAR|IK 0.384 . BBOV_IV008660 28 SRNARIK|DN 0.133 . BBOV_IV008660 32 RIKDNIK|GF 0.061 . BBOV_IV008660 35 DNIKGFK|VL 0.064 . BBOV_IV008660 38 KGFKVLK|TG 0.062 . BBOV_IV008660 49 ICGVLVK|DG 0.061 . BBOV_IV008660 59 VLAADTR|AT 0.090 . BBOV_IV008660 69 GPIVADK|NC 0.068 . BBOV_IV008660 73 ADKNCSK|LH 0.059 . BBOV_IV008660 76 NCSKLHR|IS 0.118 . BBOV_IV008660 107 NNIELLR|LN 0.068 . BBOV_IV008660 111 LLRLNLK|QK 0.066 . BBOV_IV008660 113 RLNLKQK|PK 0.072 . BBOV_IV008660 115 NLKQKPK|VQ 0.062 . BBOV_IV008660 129 LVHELFK|YQ 0.075 . BBOV_IV008660 134 FKYQGYK|QC 0.068 . BBOV_IV008660 146 LGGYDSK|GP 0.057 . BBOV_IV008660 156 LFSISPR|GS 0.230 . BBOV_IV008660 183 VLESEYR|DG 0.087 . BBOV_IV008660 197 AVALATK|AI 0.071 . BBOV_IV008660 220 DVCVINR|DG 0.089 . BBOV_IV008660 227 DGATHTR|AH 0.094 . BBOV_IV008660 235 HAVVGTR|TY 0.090 . BBOV_IV008660 242 TYAPIPR|SI 0.188 . BBOV_IV008660 253 GASCVLR|EK 0.109 . BBOV_IV008660 255 SCVLREK|IL 0.069 . BBOV_IV008660 260 EKILSMK|EY 0.064 . ____________________________^_________________

  • Fasta :-

    >BBOV_IV008660 TTTTAACTTCAGTGAATCAAAATGGAATTTGGTTACGTGCGAGAGTATATGTCTCATCAG GGAGGCTGGGATTTCTCTAACCATTCGCGTAACGCGCGCATCAAGGACAACATAAAGGGA TTCAAGGTTCTAAAAACGGGTACGACCATTTGTGGCGTGTTGGTAAAGGATGGAGTTGTG TTAGCAGCTGATACTCGTGCTACTGAGGGTCCCATTGTGGCTGATAAGAACTGCTCCAAG TTACACCGTATATCAGATTTCATTTACTGTGCTGGTGCTGGTGTTGCAGCTGATTTAGAG CATACTACTTTATGGTTGGAAAACAACATTGAGTTGCTGCGTCTTAATTTGAAGCAGAAA CCTAAAGTACAGATGTGTGTTTCCATGCTCGTTCACGAATTGTTCAAGTACCAGGGTTAC AAGCAATGCGCTTTGATTTTGGGTGGCTATGATTCCAAAGGTCCTCATTTGTTTAGCATC TCTCCTCGTGGTTCTTCTGACTCCTTGCCTTTTTGCACCATGGGTTCGGGATCATTGAAT GCTATGAGTGTACTTGAGTCTGAATATCGTGATGGAATGTCTATATCTGAAGCAGTGGCT CTTGCTACTAAGGCCATTAGTGCTGGTATTTTGAATGATTTAGGTTCGGGAGGTAATGTT GATGTCTGTGTTATAAACCGCGACGGCGCTACTCACACCCGTGCTCACGCTGTCGTTGGC ACCAGGACGTATGCTCCTATTCCACGTTCTATTCCACCGGGAGCATCTTGCGTTCTCCGT GAAAAGATCCTCAGCATGAAGGAATACATCGTTGTAGACAGCATTGATGTTGATTAG
  • Download Fasta

  • Fasta :-

    MEFGYVREYMSHQGGWDFSNHSRNARIKDNIKGFKVLKTGTTICGVLVKDGVVLAADTRA TEGPIVADKNCSKLHRISDFIYCAGAGVAADLEHTTLWLENNIELLRLNLKQKPKVQMCV SMLVHELFKYQGYKQCALILGGYDSKGPHLFSISPRGSSDSLPFCTMGSGSLNAMSVLES EYRDGMSISEAVALATKAISAGILNDLGSGGNVDVCVINRDGATHTRAHAVVGTRTYAPI PRSIPPGASCVLREKILSMKEYIVVDSIDVD

  • title: active site
  • coordinates: T41,D57,R59,K73,S169,D206,S209,G210
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
BBOV_IV008660158 SSPRGSSDSL0.991unspBBOV_IV008660258 SEKILSMKEY0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India