BBOV_IV009290 | 26S protease regulatory subunit 4, putative

_IDPredictionOTHERSPmTPCS_Position
BBOV_IV009290OTHER0.9999780.0000020.000021
No Results

  • Fasta :-

    >BBOV_IV009290 MGNAQGDLNNNQESKKNEDSTPREKPPPPVFGKHKKKQQRQFAPVRIPTVTPSAKCRLRL LKLERIKDYLLLEEEYVANKIRLNPTKNKNQDDLLRLEDLRGSPMSVGTMEEMIDDNHAI VTSSMGPEYYVNILSFVDKTLLEPGCSVLLHNKTNSVVGILLDAIDPLVSLMKVERAPLE SYSDIGGLEDQIQEIKEAVELPLTHPELYEEVGIRPPKGVILYGPPGTGKTLLAKAVANE TCATFLRVVGSELIQKYLGEGPKLVREMFRVAEENAPSIIFIDEIDAIGTKRYDATSGGE KEIQRTMLELLNQLDGFDPQADVKVIMATNRIESLDPALIRPGRIDRKIQLPNPDTKTKR KIFEIHTSKMTMSSDVDLEEFVNTKDDLCGADIKAICTEAGLLALRERRMQITQADLRKA REKALQLKKGNIPESMYC
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_IV009290.fa Sequence name : BBOV_IV009290 Sequence length : 438 VALUES OF COMPUTED PARAMETERS Coef20 : 2.579 CoefTot : -0.648 ChDiff : -5 ZoneTo : 6 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.812 1.759 0.110 0.600 MesoH : -0.441 0.435 -0.344 0.253 MuHd_075 : 10.993 5.351 2.778 1.324 MuHd_095 : 10.398 9.529 1.575 1.154 MuHd_100 : 9.750 10.184 1.761 1.286 MuHd_105 : 10.259 9.973 2.347 2.008 Hmax_075 : -14.817 -6.650 -7.118 -0.840 Hmax_095 : -14.000 -6.900 -7.586 -1.620 Hmax_100 : -14.000 -6.900 -7.586 -1.510 Hmax_105 : -13.800 -3.800 -5.826 -0.240 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9980 0.0020 DFMC : 0.9976 0.0024
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 438 BBOV_IV009290 MGNAQGDLNNNQESKKNEDSTPREKPPPPVFGKHKKKQQRQFAPVRIPTVTPSAKCRLRLLKLERIKDYLLLEEEYVANK 80 IRLNPTKNKNQDDLLRLEDLRGSPMSVGTMEEMIDDNHAIVTSSMGPEYYVNILSFVDKTLLEPGCSVLLHNKTNSVVGI 160 LLDAIDPLVSLMKVERAPLESYSDIGGLEDQIQEIKEAVELPLTHPELYEEVGIRPPKGVILYGPPGTGKTLLAKAVANE 240 TCATFLRVVGSELIQKYLGEGPKLVREMFRVAEENAPSIIFIDEIDAIGTKRYDATSGGEKEIQRTMLELLNQLDGFDPQ 320 ADVKVIMATNRIESLDPALIRPGRIDRKIQLPNPDTKTKRKIFEIHTSKMTMSSDVDLEEFVNTKDDLCGADIKAICTEA 400 GLLALRERRMQITQADLRKAREKALQLKKGNIPESMYC 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ...................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_IV009290 15 NNNQESK|KN 0.078 . BBOV_IV009290 16 NNQESKK|NE 0.093 . BBOV_IV009290 23 NEDSTPR|EK 0.070 . BBOV_IV009290 25 DSTPREK|PP 0.058 . BBOV_IV009290 33 PPPVFGK|HK 0.088 . BBOV_IV009290 35 PVFGKHK|KK 0.069 . BBOV_IV009290 36 VFGKHKK|KQ 0.109 . BBOV_IV009290 37 FGKHKKK|QQ 0.122 . BBOV_IV009290 40 HKKKQQR|QF 0.125 . BBOV_IV009290 46 RQFAPVR|IP 0.080 . BBOV_IV009290 55 TVTPSAK|CR 0.061 . BBOV_IV009290 57 TPSAKCR|LR 0.111 . BBOV_IV009290 59 SAKCRLR|LL 0.075 . BBOV_IV009290 62 CRLRLLK|LE 0.095 . BBOV_IV009290 65 RLLKLER|IK 0.080 . BBOV_IV009290 67 LKLERIK|DY 0.063 . BBOV_IV009290 80 EEYVANK|IR 0.050 . BBOV_IV009290 82 YVANKIR|LN 0.091 . BBOV_IV009290 87 IRLNPTK|NK 0.068 . BBOV_IV009290 89 LNPTKNK|NQ 0.071 . BBOV_IV009290 96 NQDDLLR|LE 0.069 . BBOV_IV009290 101 LRLEDLR|GS 0.087 . BBOV_IV009290 139 ILSFVDK|TL 0.076 . BBOV_IV009290 153 SVLLHNK|TN 0.063 . BBOV_IV009290 173 PLVSLMK|VE 0.059 . BBOV_IV009290 176 SLMKVER|AP 0.087 . BBOV_IV009290 196 DQIQEIK|EA 0.060 . BBOV_IV009290 215 YEEVGIR|PP 0.080 . BBOV_IV009290 218 VGIRPPK|GV 0.189 . BBOV_IV009290 230 GPPGTGK|TL 0.061 . BBOV_IV009290 235 GKTLLAK|AV 0.077 . BBOV_IV009290 247 TCATFLR|VV 0.169 . BBOV_IV009290 256 GSELIQK|YL 0.081 . BBOV_IV009290 263 YLGEGPK|LV 0.073 . BBOV_IV009290 266 EGPKLVR|EM 0.072 . BBOV_IV009290 270 LVREMFR|VA 0.129 . BBOV_IV009290 291 IDAIGTK|RY 0.059 . BBOV_IV009290 292 DAIGTKR|YD 0.183 . BBOV_IV009290 301 ATSGGEK|EI 0.062 . BBOV_IV009290 305 GEKEIQR|TM 0.080 . BBOV_IV009290 324 DPQADVK|VI 0.066 . BBOV_IV009290 331 VIMATNR|IE 0.076 . BBOV_IV009290 341 LDPALIR|PG 0.079 . BBOV_IV009290 344 ALIRPGR|ID 0.232 . BBOV_IV009290 347 RPGRIDR|KI 0.193 . BBOV_IV009290 348 PGRIDRK|IQ 0.077 . BBOV_IV009290 357 LPNPDTK|TK 0.076 . BBOV_IV009290 359 NPDTKTK|RK 0.071 . BBOV_IV009290 360 PDTKTKR|KI 0.218 . BBOV_IV009290 361 DTKTKRK|IF 0.095 . BBOV_IV009290 369 FEIHTSK|MT 0.064 . BBOV_IV009290 385 EEFVNTK|DD 0.061 . BBOV_IV009290 394 LCGADIK|AI 0.067 . BBOV_IV009290 406 AGLLALR|ER 0.068 . BBOV_IV009290 408 LLALRER|RM 0.082 . BBOV_IV009290 409 LALRERR|MQ 0.373 . BBOV_IV009290 418 ITQADLR|KA 0.088 . BBOV_IV009290 419 TQADLRK|AR 0.108 . BBOV_IV009290 421 ADLRKAR|EK 0.240 . BBOV_IV009290 423 LRKAREK|AL 0.072 . BBOV_IV009290 428 EKALQLK|KG 0.067 . BBOV_IV009290 429 KALQLKK|GN 0.089 . ____________________________^_________________

  • Fasta :-

    >BBOV_IV009290 ATGGGTAACGCTCAGGGGGATTTAAATAATAACCAAGAGAGCAAGAAAAATGAAGACAGC ACACCTCGTGAGAAGCCTCCACCTCCAGTTTTTGGCAAACATAAGAAGAAGCAGCAACGC CAGTTTGCTCCAGTTCGGATTCCAACAGTCACTCCTAGTGCAAAATGCCGGTTACGGCTG TTGAAGTTGGAGCGAATAAAGGACTATTTGCTTTTGGAAGAGGAATATGTCGCTAATAAA ATTCGTTTGAATCCTACTAAAAACAAGAATCAGGACGATTTACTTCGTTTAGAGGACCTT CGTGGCAGTCCAATGAGTGTTGGCACCATGGAGGAGATGATTGATGACAATCACGCTATC GTAACTAGTTCCATGGGCCCTGAGTACTACGTCAACATTTTATCTTTTGTTGACAAAACA CTACTTGAGCCTGGTTGTTCCGTATTGTTACACAACAAGACCAACAGCGTGGTGGGTATA TTGCTGGATGCAATTGACCCTTTGGTTTCCTTGATGAAGGTTGAGCGTGCTCCTTTAGAG TCTTACTCTGATATCGGGGGTTTGGAAGACCAGATCCAGGAGATTAAGGAAGCTGTTGAG TTGCCTTTAACTCACCCTGAGTTGTATGAGGAGGTTGGCATTCGTCCTCCGAAAGGTGTA ATTTTGTATGGTCCCCCAGGTACTGGGAAGACATTGTTAGCTAAGGCTGTTGCTAACGAG ACCTGTGCTACATTTTTACGTGTTGTGGGTTCCGAGCTCATTCAAAAGTACCTTGGTGAG GGACCTAAACTAGTTCGTGAGATGTTCCGTGTTGCGGAGGAAAACGCGCCATCTATTATT TTCATTGACGAAATCGACGCTATCGGTACTAAGCGTTATGACGCTACCAGTGGTGGTGAG AAGGAGATTCAAAGGACTATGTTGGAGTTATTAAACCAGCTGGATGGTTTCGATCCTCAG GCTGATGTGAAGGTTATCATGGCTACTAACCGCATCGAATCATTAGATCCTGCTCTTATC AGGCCCGGTCGTATAGACCGTAAGATACAGTTACCCAATCCAGATACCAAGACTAAACGT AAGATCTTTGAGATCCATACATCTAAGATGACCATGTCATCGGATGTGGACCTTGAAGAA TTTGTGAACACTAAGGACGACCTCTGTGGCGCGGATATCAAGGCCATTTGCACTGAGGCT GGGTTGTTAGCTCTTCGTGAACGGCGTATGCAGATTACCCAGGCTGATTTGCGCAAGGCT CGTGAGAAGGCTCTTCAGTTAAAGAAGGGCAATATTCCGGAGAGCATGTACTGCTAG
  • Download Fasta

  • Fasta :-

    MGNAQGDLNNNQESKKNEDSTPREKPPPPVFGKHKKKQQRQFAPVRIPTVTPSAKCRLRL LKLERIKDYLLLEEEYVANKIRLNPTKNKNQDDLLRLEDLRGSPMSVGTMEEMIDDNHAI VTSSMGPEYYVNILSFVDKTLLEPGCSVLLHNKTNSVVGILLDAIDPLVSLMKVERAPLE SYSDIGGLEDQIQEIKEAVELPLTHPELYEEVGIRPPKGVILYGPPGTGKTLLAKAVANE TCATFLRVVGSELIQKYLGEGPKLVREMFRVAEENAPSIIFIDEIDAIGTKRYDATSGGE KEIQRTMLELLNQLDGFDPQADVKVIMATNRIESLDPALIRPGRIDRKIQLPNPDTKTKR KIFEIHTSKMTMSSDVDLEEFVNTKDDLCGADIKAICTEAGLLALRERRMQITQADLRKA REKALQLKKGNIPESMYC

  • title: ATP binding site
  • coordinates: P225,P226,G227,T228,G229,K230,T231,L232,D283,N330
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
BBOV_IV009290181 SAPLESYSDI0.991unspBBOV_IV009290181 SAPLESYSDI0.991unspBBOV_IV009290181 SAPLESYSDI0.991unspBBOV_IV009290297 SYDATSGGEK0.997unspBBOV_IV00929014 SNNQESKKNE0.992unspBBOV_IV00929021 TNEDSTPREK0.992unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India