BBOV_IV009940 | 26S protease regulatory subunit 7, putative

_IDPredictionOTHERSPmTPCS_Position
BBOV_IV009940OTHER0.9999170.0000680.000015
No Results

  • Fasta :-

    >BBOV_IV009940 MAAPEEDGDPQSVSTPLNDAEISILKSFGIGPYTESISESEKGIKTVVQRINKLSGIKES DTGLNPLHMWDLMYDQQALQEGVPLQVARCTTIINPGTPQAKYVINVKQIAKFVVGLGEK AAATDIEEGMRVGVDRNKYKIQIALPPRIDPSVTMMTVEEKPDITYNDVGGCKVQLEKLR EVVEMPLLYPERFVELGIDPPKGVLLYGPPGTGKTLTARAVANRTDACFICVIGSELVQK YVGEGARLVRELFQMARSKKACILFIDEVDAIGGSRGDESAHGDHEVQRTMLEIVNQLDG FDARGNIKVIMATNRPDTLDPALLRPGRIDRKIEFGLPDLDGRKHIFKIHAKTMSVEKNI RYELLARLCPNSTGADLRSVCTEAGMFAIRSRRKTITEKDFIDAITKVIQGYKKFSATGR YMVYN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_IV009940.fa Sequence name : BBOV_IV009940 Sequence length : 425 VALUES OF COMPUTED PARAMETERS Coef20 : 2.749 CoefTot : 0.029 ChDiff : 0 ZoneTo : 4 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.406 1.247 0.094 0.444 MesoH : -0.887 0.330 -0.358 0.172 MuHd_075 : 11.182 12.317 4.194 3.093 MuHd_095 : 8.779 10.397 2.384 2.713 MuHd_100 : 2.776 10.560 1.399 2.401 MuHd_105 : 5.386 9.876 2.340 2.281 Hmax_075 : 3.600 6.900 -0.384 2.840 Hmax_095 : 1.700 2.013 -2.622 1.628 Hmax_100 : 0.800 5.700 -1.134 2.640 Hmax_105 : -1.867 4.550 -1.472 2.707 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9872 0.0128 DFMC : 0.9903 0.0097
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 425 BBOV_IV009940 MAAPEEDGDPQSVSTPLNDAEISILKSFGIGPYTESISESEKGIKTVVQRINKLSGIKESDTGLNPLHMWDLMYDQQALQ 80 EGVPLQVARCTTIINPGTPQAKYVINVKQIAKFVVGLGEKAAATDIEEGMRVGVDRNKYKIQIALPPRIDPSVTMMTVEE 160 KPDITYNDVGGCKVQLEKLREVVEMPLLYPERFVELGIDPPKGVLLYGPPGTGKTLTARAVANRTDACFICVIGSELVQK 240 YVGEGARLVRELFQMARSKKACILFIDEVDAIGGSRGDESAHGDHEVQRTMLEIVNQLDGFDARGNIKVIMATNRPDTLD 320 PALLRPGRIDRKIEFGLPDLDGRKHIFKIHAKTMSVEKNIRYELLARLCPNSTGADLRSVCTEAGMFAIRSRRKTITEKD 400 FIDAITKVIQGYKKFSATGRYMVYN 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ......................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_IV009940 26 AEISILK|SF 0.089 . BBOV_IV009940 42 SISESEK|GI 0.086 . BBOV_IV009940 45 ESEKGIK|TV 0.068 . BBOV_IV009940 50 IKTVVQR|IN 0.084 . BBOV_IV009940 53 VVQRINK|LS 0.138 . BBOV_IV009940 58 NKLSGIK|ES 0.063 . BBOV_IV009940 89 VPLQVAR|CT 0.135 . BBOV_IV009940 102 PGTPQAK|YV 0.085 . BBOV_IV009940 108 KYVINVK|QI 0.063 . BBOV_IV009940 112 NVKQIAK|FV 0.077 . BBOV_IV009940 120 VVGLGEK|AA 0.059 . BBOV_IV009940 131 DIEEGMR|VG 0.064 . BBOV_IV009940 136 MRVGVDR|NK 0.141 . BBOV_IV009940 138 VGVDRNK|YK 0.063 . BBOV_IV009940 140 VDRNKYK|IQ 0.073 . BBOV_IV009940 148 QIALPPR|ID 0.085 . BBOV_IV009940 161 MMTVEEK|PD 0.063 . BBOV_IV009940 173 NDVGGCK|VQ 0.056 . BBOV_IV009940 178 CKVQLEK|LR 0.064 . BBOV_IV009940 180 VQLEKLR|EV 0.091 . BBOV_IV009940 192 PLLYPER|FV 0.142 . BBOV_IV009940 202 LGIDPPK|GV 0.074 . BBOV_IV009940 214 GPPGTGK|TL 0.062 . BBOV_IV009940 219 GKTLTAR|AV 0.113 . BBOV_IV009940 224 ARAVANR|TD 0.087 . BBOV_IV009940 240 GSELVQK|YV 0.128 . BBOV_IV009940 247 YVGEGAR|LV 0.115 . BBOV_IV009940 250 EGARLVR|EL 0.257 . BBOV_IV009940 257 ELFQMAR|SK 0.116 . BBOV_IV009940 259 FQMARSK|KA 0.073 . BBOV_IV009940 260 QMARSKK|AC 0.315 . BBOV_IV009940 276 DAIGGSR|GD 0.087 . BBOV_IV009940 289 GDHEVQR|TM 0.110 . BBOV_IV009940 304 LDGFDAR|GN 0.138 . BBOV_IV009940 308 DARGNIK|VI 0.060 . BBOV_IV009940 315 VIMATNR|PD 0.075 . BBOV_IV009940 325 LDPALLR|PG 0.073 . BBOV_IV009940 328 ALLRPGR|ID 0.271 . BBOV_IV009940 331 RPGRIDR|KI 0.461 . BBOV_IV009940 332 PGRIDRK|IE 0.070 . BBOV_IV009940 343 LPDLDGR|KH 0.079 . BBOV_IV009940 344 PDLDGRK|HI 0.076 . BBOV_IV009940 348 GRKHIFK|IH 0.070 . BBOV_IV009940 352 IFKIHAK|TM 0.068 . BBOV_IV009940 358 KTMSVEK|NI 0.067 . BBOV_IV009940 361 SVEKNIR|YE 0.075 . BBOV_IV009940 367 RYELLAR|LC 0.070 . BBOV_IV009940 378 STGADLR|SV 0.270 . BBOV_IV009940 390 AGMFAIR|SR 0.115 . BBOV_IV009940 392 MFAIRSR|RK 0.100 . BBOV_IV009940 393 FAIRSRR|KT 0.463 . BBOV_IV009940 394 AIRSRRK|TI 0.089 . BBOV_IV009940 399 RKTITEK|DF 0.077 . BBOV_IV009940 407 FIDAITK|VI 0.056 . BBOV_IV009940 413 KVIQGYK|KF 0.066 . BBOV_IV009940 414 VIQGYKK|FS 0.129 . BBOV_IV009940 420 KFSATGR|YM 0.106 . ____________________________^_________________

  • Fasta :-

    >BBOV_IV009940 ATGGCAGCACCCGAAGAAGACGGGGATCCCCAATCCGTTTCTACACCCCTTAACGATGCT GAAATCAGCATACTAAAGAGTTTCGGAATTGGACCTTATACCGAATCTATTAGTGAATCT GAGAAAGGCATAAAAACAGTAGTACAACGTATAAATAAGCTGTCAGGCATAAAGGAGAGT GACACGGGTTTGAACCCACTCCATATGTGGGATTTGATGTATGATCAACAAGCTCTACAA GAAGGAGTGCCACTGCAAGTTGCAAGATGTACAACTATCATTAACCCTGGAACGCCTCAA GCCAAATATGTAATCAACGTTAAACAAATCGCCAAATTCGTAGTGGGTCTTGGAGAAAAG GCTGCAGCTACCGATATAGAGGAGGGTATGAGAGTTGGGGTTGACCGTAATAAATATAAA ATACAAATCGCGTTACCTCCACGTATCGATCCTTCAGTTACAATGATGACCGTTGAAGAA AAGCCAGATATTACATATAACGATGTTGGAGGTTGTAAAGTACAGTTGGAGAAATTGAGA GAAGTCGTCGAAATGCCACTTTTGTATCCGGAGCGTTTTGTAGAATTGGGTATAGACCCG CCGAAAGGTGTGCTTCTTTACGGACCACCAGGGACGGGTAAAACATTAACAGCAAGAGCA GTAGCTAACAGGACTGATGCTTGCTTCATATGTGTTATCGGTTCGGAACTAGTTCAAAAA TATGTTGGTGAAGGAGCAAGACTAGTAAGAGAACTTTTCCAAATGGCAAGATCGAAAAAA GCTTGCATTCTTTTCATCGATGAAGTAGATGCAATCGGTGGATCACGTGGAGATGAATCC GCACATGGAGATCATGAAGTACAACGTACGATGTTAGAAATTGTTAACCAGCTTGACGGT TTCGATGCAAGAGGAAACATCAAAGTTATCATGGCAACCAACAGACCTGATACTCTGGAT CCTGCACTACTTCGACCAGGACGTATCGATCGTAAAATAGAATTTGGACTGCCAGACCTT GATGGACGAAAACATATATTCAAAATTCACGCGAAAACCATGAGTGTTGAAAAGAATATA AGATACGAACTATTAGCAAGGTTATGCCCAAACAGTACAGGAGCAGATTTAAGAAGTGTA TGCACTGAAGCTGGAATGTTTGCAATCAGGTCAAGGAGGAAAACCATAACAGAAAAGGAT TTCATAGACGCTATCACTAAAGTCATACAAGGCTACAAGAAATTTTCAGCTACAGGCCGT TATATGGTGTACAATTAATCTTAATCTATTATTGTATTATTTG
  • Download Fasta

  • Fasta :-

    MAAPEEDGDPQSVSTPLNDAEISILKSFGIGPYTESISESEKGIKTVVQRINKLSGIKES DTGLNPLHMWDLMYDQQALQEGVPLQVARCTTIINPGTPQAKYVINVKQIAKFVVGLGEK AAATDIEEGMRVGVDRNKYKIQIALPPRIDPSVTMMTVEEKPDITYNDVGGCKVQLEKLR EVVEMPLLYPERFVELGIDPPKGVLLYGPPGTGKTLTARAVANRTDACFICVIGSELVQK YVGEGARLVRELFQMARSKKACILFIDEVDAIGGSRGDESAHGDHEVQRTMLEIVNQLDG FDARGNIKVIMATNRPDTLDPALLRPGRIDRKIEFGLPDLDGRKHIFKIHAKTMSVEKNI RYELLARLCPNSTGADLRSVCTEAGMFAIRSRRKTITEKDFIDAITKVIQGYKKFSATGR YMVYN

  • title: ATP binding site
  • coordinates: P209,P210,G211,T212,G213,K214,T215,L216,D267,N314
No Results
No Results
IDSitePeptideScoreMethod
BBOV_IV00994040 SSISESEKGI0.992unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India