BBOV_IV010560 | lysophospholipase, putative

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_IDPredictionOTHERSPmTPCS_Position
BBOV_IV010560OTHER0.9425380.0212280.036234
No Results

  • Fasta :-

    >BBOV_IV010560 METKAATVIFAMSHFKNKQNLMIRTYSAVLPQAKGNIVLAHGNCGHFRSEFAAYDIEWYM AHYGIGTPNVKNVVDAELSGVYPKDANMSYNYSNSAFPHFSQLDGRNMFDITPRFIYEGS FIQKLNSIGYNVYGLDHQSHGLSQGITDQRNYFLSIDDLADDIIQFIDIVRRGKFKDTEQ SMNDYNPHQPSEVGKVFLGGISMGGNIVLRAAQKSGSYNKSNSMFLDGLIAFAPMTDMTT YTATPKAKLLFCAARVIAALKPRSISNLGCTVPDNVNRFFRCQDPIYYSACQSYRVLLNL FDATTTLSKNYGSYPPEMPTLLFHSKDDDVCTIRGTYEILSTHLKNHKDIKFVEMEGSIH CLTAAIYVENIMPFVAKWLNRINP
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_IV010560.fa Sequence name : BBOV_IV010560 Sequence length : 384 VALUES OF COMPUTED PARAMETERS Coef20 : 3.993 CoefTot : -1.590 ChDiff : 1 ZoneTo : 49 KR : 6 DE : 1 CleavSite : 27 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.100 1.394 0.095 0.593 MesoH : -0.115 0.435 -0.260 0.224 MuHd_075 : 23.891 18.622 6.391 4.742 MuHd_095 : 26.997 20.706 6.939 6.306 MuHd_100 : 23.086 17.463 5.727 5.793 MuHd_105 : 25.084 15.836 6.537 5.646 Hmax_075 : 10.617 18.783 3.188 5.717 Hmax_095 : 7.525 15.750 -0.536 5.399 Hmax_100 : 15.900 19.400 3.303 6.520 Hmax_105 : 8.700 9.900 0.518 3.110 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.4827 0.5173 DFMC : 0.5122 0.4878
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 384 BBOV_IV010560 METKAATVIFAMSHFKNKQNLMIRTYSAVLPQAKGNIVLAHGNCGHFRSEFAAYDIEWYMAHYGIGTPNVKNVVDAELSG 80 VYPKDANMSYNYSNSAFPHFSQLDGRNMFDITPRFIYEGSFIQKLNSIGYNVYGLDHQSHGLSQGITDQRNYFLSIDDLA 160 DDIIQFIDIVRRGKFKDTEQSMNDYNPHQPSEVGKVFLGGISMGGNIVLRAAQKSGSYNKSNSMFLDGLIAFAPMTDMTT 240 YTATPKAKLLFCAARVIAALKPRSISNLGCTVPDNVNRFFRCQDPIYYSACQSYRVLLNLFDATTTLSKNYGSYPPEMPT 320 LLFHSKDDDVCTIRGTYEILSTHLKNHKDIKFVEMEGSIHCLTAAIYVENIMPFVAKWLNRINP 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................ 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_IV010560 4 ---METK|AA 0.081 . BBOV_IV010560 16 FAMSHFK|NK 0.059 . BBOV_IV010560 18 MSHFKNK|QN 0.080 . BBOV_IV010560 24 KQNLMIR|TY 0.138 . BBOV_IV010560 34 AVLPQAK|GN 0.066 . BBOV_IV010560 48 GNCGHFR|SE 0.185 . BBOV_IV010560 71 IGTPNVK|NV 0.073 . BBOV_IV010560 84 LSGVYPK|DA 0.094 . BBOV_IV010560 106 FSQLDGR|NM 0.105 . BBOV_IV010560 114 MFDITPR|FI 0.111 . BBOV_IV010560 124 EGSFIQK|LN 0.075 . BBOV_IV010560 150 QGITDQR|NY 0.082 . BBOV_IV010560 171 QFIDIVR|RG 0.064 . BBOV_IV010560 172 FIDIVRR|GK 0.135 . BBOV_IV010560 174 DIVRRGK|FK 0.189 . BBOV_IV010560 176 VRRGKFK|DT 0.137 . BBOV_IV010560 195 QPSEVGK|VF 0.096 . BBOV_IV010560 210 GGNIVLR|AA 0.136 . BBOV_IV010560 214 VLRAAQK|SG 0.076 . BBOV_IV010560 220 KSGSYNK|SN 0.104 . BBOV_IV010560 246 TYTATPK|AK 0.054 . BBOV_IV010560 248 TATPKAK|LL 0.076 . BBOV_IV010560 255 LLFCAAR|VI 0.094 . BBOV_IV010560 261 RVIAALK|PR 0.061 . BBOV_IV010560 263 IAALKPR|SI 0.249 . BBOV_IV010560 278 VPDNVNR|FF 0.118 . BBOV_IV010560 281 NVNRFFR|CQ 0.439 . BBOV_IV010560 295 SACQSYR|VL 0.086 . BBOV_IV010560 309 ATTTLSK|NY 0.061 . BBOV_IV010560 326 TLLFHSK|DD 0.074 . BBOV_IV010560 334 DDVCTIR|GT 0.112 . BBOV_IV010560 345 ILSTHLK|NH 0.071 . BBOV_IV010560 348 THLKNHK|DI 0.079 . BBOV_IV010560 351 KNHKDIK|FV 0.141 . BBOV_IV010560 377 IMPFVAK|WL 0.081 . BBOV_IV010560 381 VAKWLNR|IN 0.087 . ____________________________^_________________

  • Fasta :-

    >BBOV_IV010560 GTTTAACATTTGAGTATTAGACGCTGATTAATGCGATTTTAAACTATTATTGCATTATAC CGTCGTTTCAACTGTTTTTCTTCATACGCGATGTATATTAGTTTTTGGTGATGTTTGTTC AAAAGAAACAGACAAGATGGAGACTAAGGCTGCTACAGTAATATTTGCCATGAGCCATTT TAAAAATAAGCAGAATCTTATGATTCGTACTTATTCGGCTGTGCTTCCCCAGGCTAAGGG TAACATCGTCCTGGCACATGGTAATTGCGGACATTTTAGAAGCGAATTTGCTGCTTACGA CATTGAATGGTACATGGCACATTATGGAATTGGAACACCAAATGTAAAAAATGTTGTTGA TGCCGAACTAAGTGGAGTCTATCCCAAGGATGCTAACATGAGCTACAATTATTCCAATAG TGCATTTCCACATTTTTCACAGCTAGATGGCCGTAATATGTTTGACATAACTCCAAGATT TATTTACGAGGGAAGTTTCATACAGAAGCTTAACAGTATTGGATACAATGTCTACGGTTT AGATCACCAATCCCACGGATTGTCTCAAGGTATCACTGATCAGCGCAATTACTTCCTATC CATTGATGATTTGGCTGACGATATTATTCAATTCATTGATATTGTGCGTCGTGGGAAGTT TAAAGATACCGAGCAGTCCATGAATGACTACAACCCTCACCAACCATCGGAGGTAGGGAA AGTTTTCCTTGGTGGTATTTCTATGGGTGGAAACATTGTTTTAAGGGCTGCTCAAAAAAG TGGGTCATACAACAAATCAAATTCGATGTTCCTCGATGGTCTAATTGCCTTTGCGCCAAT GACTGACATGACCACATATACTGCAACTCCTAAAGCCAAACTATTGTTTTGTGCTGCTAG GGTTATTGCTGCTTTGAAACCCAGATCCATTTCGAATTTGGGATGCACTGTTCCTGATAA TGTAAACAGGTTCTTCAGATGTCAAGATCCTATTTACTACTCTGCTTGTCAGAGCTATCG TGTACTTCTCAACTTGTTCGACGCCACAACTACACTGTCAAAGAATTATGGCTCTTACCC TCCCGAAATGCCAACTCTGCTGTTCCATTCGAAAGACGATGATGTGTGCACAATCAGAGG CACATATGAAATCCTAAGCACCCATCTTAAAAATCACAAAGATATCAAATTTGTGGAAAT GGAAGGGTCGATTCACTGCTTGACCGCCGCAATATATGTTGAGAATATTATGCCATTCGT TGCTAAGTGGCTCAACAGGATCAACCCATAA
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  • Fasta :-

    METKAATVIFAMSHFKNKQNLMIRTYSAVLPQAKGNIVLAHGNCGHFRSEFAAYDIEWYM AHYGIGTPNVKNVVDAELSGVYPKDANMSYNYSNSAFPHFSQLDGRNMFDITPRFIYEGS FIQKLNSIGYNVYGLDHQSHGLSQGITDQRNYFLSIDDLADDIIQFIDIVRRGKFKDTEQ SMNDYNPHQPSEVGKVFLGGISMGGNIVLRAAQKSGSYNKSNSMFLDGLIAFAPMTDMTT YTATPKAKLLFCAARVIAALKPRSISNLGCTVPDNVNRFFRCQDPIYYSACQSYRVLLNL FDATTTLSKNYGSYPPEMPTLLFHSKDDDVCTIRGTYEILSTHLKNHKDIKFVEMEGSIH CLTAAIYVENIMPFVAKWLNRINP

    No Results
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IDSitePeptideScoreMethod
BBOV_IV010560325 SLLFHSKDDD0.991unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India