Chro.10047 | hypothetical protein

_IDPredictionOTHERSPmTPCS_Position
Chro.10047SP0.3489880.6445980.006414CS pos: 27-28. VFG-YV. Pr: 0.9843
No Results

  • Fasta :-

    >Chro.10047 MKKQRKPSDIISFLTIIFLIFIYKVFGYVERPERKLQYSREQISTIPDDYLELGIPDMDY GVENQDLRRILYSLNRGSLRSFPTLNEAMIILDNLASQFGPNFMRKHKIGTSFEGRPIDA YRVGFFSKMDGSYSEDSYFYINQGKKPAFLLTSMHHSREPAGLTTGIYFITKLMEDAIYK QDPASNFLLSNIDIWYVPFVNPDGYAAIERTRNYGIRKNQRKTCNSGRSDEDGVDINRNY DFNFKNSLVSKCDPQEYSGEYPFSEPETRAIRDLVNNVKSFVTAVNLHTFGDLWTIPWNC CKNKDLNENIASIYNELKYEILISSPSCIIRTLMHMKGPFFVNSAKKGFDSTFFTKSRNE FENASNYCFSSAARNPTMDYEASGEADDYLLAVHNIISLSPEIGSEYFGFYPPQSEIFPI AKKYYPQILAVASKSTIELSISASLHLQMHSEVNHGKLEFSMFNSGLSSICSNITYETHK NDSKGTSECHTIFTWELLSSNCKQDSKFDPGKTKFGEYSAGFRYRTSNFKELNSTVS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/463 Sequence name : 463 Sequence length : 537 VALUES OF COMPUTED PARAMETERS Coef20 : 4.358 CoefTot : -1.059 ChDiff : -3 ZoneTo : 29 KR : 5 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.994 2.547 0.348 0.884 MesoH : -0.235 0.212 -0.368 0.256 MuHd_075 : 23.956 16.026 6.775 4.692 MuHd_095 : 25.293 18.573 6.480 5.833 MuHd_100 : 27.677 16.148 6.156 6.126 MuHd_105 : 32.884 17.631 8.002 7.137 Hmax_075 : 20.883 24.300 4.949 7.919 Hmax_095 : 22.575 26.163 4.846 8.750 Hmax_100 : 19.300 27.100 0.516 7.820 Hmax_105 : 11.800 15.000 1.698 5.770 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8630 0.1370 DFMC : 0.9423 0.0577
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 537 Chro.10047 MKKQRKPSDIISFLTIIFLIFIYKVFGYVERPERKLQYSREQISTIPDDYLELGIPDMDYGVENQDLRRILYSLNRGSLR 80 SFPTLNEAMIILDNLASQFGPNFMRKHKIGTSFEGRPIDAYRVGFFSKMDGSYSEDSYFYINQGKKPAFLLTSMHHSREP 160 AGLTTGIYFITKLMEDAIYKQDPASNFLLSNIDIWYVPFVNPDGYAAIERTRNYGIRKNQRKTCNSGRSDEDGVDINRNY 240 DFNFKNSLVSKCDPQEYSGEYPFSEPETRAIRDLVNNVKSFVTAVNLHTFGDLWTIPWNCCKNKDLNENIASIYNELKYE 320 ILISSPSCIIRTLMHMKGPFFVNSAKKGFDSTFFTKSRNEFENASNYCFSSAARNPTMDYEASGEADDYLLAVHNIISLS 400 PEIGSEYFGFYPPQSEIFPIAKKYYPQILAVASKSTIELSISASLHLQMHSEVNHGKLEFSMFNSGLSSICSNITYETHK 480 NDSKGTSECHTIFTWELLSSNCKQDSKFDPGKTKFGEYSAGFRYRTSNFKELNSTVS 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ......................................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Chro.10047 2 -----MK|KQ 0.059 . Chro.10047 3 ----MKK|QR 0.091 . Chro.10047 5 --MKKQR|KP 0.129 . Chro.10047 6 -MKKQRK|PS 0.093 . Chro.10047 24 FLIFIYK|VF 0.069 . Chro.10047 31 VFGYVER|PE 0.085 . Chro.10047 34 YVERPER|KL 0.188 . Chro.10047 35 VERPERK|LQ 0.073 . Chro.10047 40 RKLQYSR|EQ 0.073 . Chro.10047 68 VENQDLR|RI 0.078 . Chro.10047 69 ENQDLRR|IL 0.113 . Chro.10047 76 ILYSLNR|GS 0.092 . Chro.10047 80 LNRGSLR|SF 0.130 . Chro.10047 105 FGPNFMR|KH 0.080 . Chro.10047 106 GPNFMRK|HK 0.101 . Chro.10047 108 NFMRKHK|IG 0.124 . Chro.10047 116 GTSFEGR|PI 0.180 . Chro.10047 122 RPIDAYR|VG 0.088 . Chro.10047 128 RVGFFSK|MD 0.071 . Chro.10047 145 FYINQGK|KP 0.059 . Chro.10047 146 YINQGKK|PA 0.099 . Chro.10047 158 TSMHHSR|EP 0.105 . Chro.10047 172 GIYFITK|LM 0.067 . Chro.10047 180 MEDAIYK|QD 0.059 . Chro.10047 210 GYAAIER|TR 0.080 . Chro.10047 212 AAIERTR|NY 0.097 . Chro.10047 217 TRNYGIR|KN 0.115 . Chro.10047 218 RNYGIRK|NQ 0.080 . Chro.10047 221 GIRKNQR|KT 0.119 . Chro.10047 222 IRKNQRK|TC 0.113 . Chro.10047 228 KTCNSGR|SD 0.216 . Chro.10047 238 DGVDINR|NY 0.071 . Chro.10047 245 NYDFNFK|NS 0.053 . Chro.10047 251 KNSLVSK|CD 0.079 . Chro.10047 269 FSEPETR|AI 0.110 . Chro.10047 272 PETRAIR|DL 0.223 . Chro.10047 279 DLVNNVK|SF 0.074 . Chro.10047 302 IPWNCCK|NK 0.067 . Chro.10047 304 WNCCKNK|DL 0.098 . Chro.10047 318 SIYNELK|YE 0.059 . Chro.10047 331 SPSCIIR|TL 0.119 . Chro.10047 337 RTLMHMK|GP 0.068 . Chro.10047 346 FFVNSAK|KG 0.064 . Chro.10047 347 FVNSAKK|GF 0.136 . Chro.10047 356 DSTFFTK|SR 0.082 . Chro.10047 358 TFFTKSR|NE 0.082 . Chro.10047 374 CFSSAAR|NP 0.080 . Chro.10047 422 EIFPIAK|KY 0.068 . Chro.10047 423 IFPIAKK|YY 0.110 . Chro.10047 434 ILAVASK|ST 0.085 . Chro.10047 457 SEVNHGK|LE 0.071 . Chro.10047 480 ITYETHK|ND 0.069 . Chro.10047 484 THKNDSK|GT 0.077 . Chro.10047 503 LLSSNCK|QD 0.075 . Chro.10047 507 NCKQDSK|FD 0.060 . Chro.10047 512 SKFDPGK|TK 0.069 . Chro.10047 514 FDPGKTK|FG 0.067 . Chro.10047 523 EYSAGFR|YR 0.085 . Chro.10047 525 SAGFRYR|TS 0.120 . Chro.10047 530 YRTSNFK|EL 0.061 . ____________________________^_________________

  • Fasta :-

    >Chro.10047 ATGAAGAAGCAAAGAAAGCCATCAGATATTATTAGTTTTTTAACCATAATTTTTTTGATA TTTATTTACAAAGTTTTTGGATATGTAGAAAGACCAGAGAGGAAGCTACAATATTCAAGA GAACAAATTTCAACAATTCCTGATGATTATTTAGAATTAGGAATCCCTGATATGGATTAT GGTGTTGAAAACCAAGATCTCAGAAGAATTTTGTATTCTTTGAATAGGGGTTCATTGAGA AGCTTCCCAACATTGAACGAAGCAATGATCATTTTGGATAATTTAGCATCACAATTCGGA CCAAACTTTATGAGAAAGCATAAAATAGGGACAAGTTTTGAAGGAAGGCCTATTGATGCT TATAGAGTCGGATTTTTTAGTAAGATGGATGGCTCTTATTCAGAAGATTCGTACTTTTAT ATCAATCAGGGTAAAAAACCTGCATTTTTACTAACATCAATGCATCATTCAAGAGAGCCT GCAGGCTTAACAACTGGAATATACTTTATCACTAAACTTATGGAAGATGCAATTTATAAG CAAGACCCTGCTTCTAACTTTTTACTCTCTAATATCGACATTTGGTATGTCCCATTTGTA AATCCAGACGGATATGCAGCAATAGAAAGAACAAGAAATTATGGGATTAGAAAGAATCAA AGGAAAACTTGTAATTCTGGGAGATCAGATGAAGATGGAGTTGATATTAATCGTAATTAT GACTTCAATTTTAAAAACTCTCTTGTTTCTAAATGTGACCCGCAAGAGTATTCTGGGGAA TATCCTTTTTCTGAACCCGAAACACGAGCTATAAGAGATCTTGTAAATAATGTAAAAAGT TTTGTTACTGCAGTTAATCTACATACATTTGGTGATTTGTGGACTATACCTTGGAATTGT TGCAAAAACAAAGATCTAAACGAGAATATCGCTTCCATATATAATGAACTTAAGTATGAA ATTTTAATATCTTCTCCTTCTTGTATAATTAGAACCTTAATGCATATGAAGGGCCCATTT TTTGTCAATTCTGCCAAAAAAGGATTTGATTCAACATTTTTCACAAAATCAAGAAATGAG TTTGAAAATGCTTCCAATTATTGTTTCTCATCAGCAGCTAGAAACCCCACAATGGATTAT GAGGCTTCGGGAGAAGCAGATGACTATTTACTTGCAGTTCACAATATAATTTCATTATCT CCAGAAATTGGCTCTGAATATTTTGGTTTTTATCCCCCTCAGAGTGAAATTTTCCCAATT GCAAAAAAATATTATCCCCAAATTCTTGCTGTGGCCTCAAAGTCCACTATTGAGCTTAGC ATTTCTGCTAGCTTACACTTACAAATGCACTCTGAAGTTAATCATGGAAAACTTGAATTT TCAATGTTCAACAGTGGATTATCATCTATTTGCTCCAATATTACTTATGAGACTCACAAA AATGATTCCAAGGGAACTTCTGAATGTCACACAATCTTTACTTGGGAGCTGCTTTCATCT AACTGTAAACAAGATTCCAAATTTGATCCTGGAAAAACCAAATTCGGTGAGTATTCTGCC GGCTTTAGATACAGAACTTCTAATTTTAAGGAATTGAACTCTACTGTCAGCA
  • Download Fasta

  • Fasta :-

    MKKQRKPSDIISFLTIIFLIFIYKVFGYVERPERKLQYSREQISTIPDDYLELGIPDMDY GVENQDLRRILYSLNRGSLRSFPTLNEAMIILDNLASQFGPNFMRKHKIGTSFEGRPIDA YRVGFFSKMDGSYSEDSYFYINQGKKPAFLLTSMHHSREPAGLTTGIYFITKLMEDAIYK QDPASNFLLSNIDIWYVPFVNPDGYAAIERTRNYGIRKNQRKTCNSGRSDEDGVDINRNY DFNFKNSLVSKCDPQEYSGEYPFSEPETRAIRDLVNNVKSFVTAVNLHTFGDLWTIPWNC CKNKDLNENIASIYNELKYEILISSPSCIIRTLMHMKGPFFVNSAKKGFDSTFFTKSRNE FENASNYCFSSAARNPTMDYEASGEADDYLLAVHNIISLSPEIGSEYFGFYPPQSEIFPI AKKYYPQILAVASKSTIELSISASLHLQMHSEVNHGKLEFSMFNSGLSSICSNITYETHK NDSKGTSECHTIFTWELLSSNCKQDSKFDPGKTKFGEYSAGFRYRTSNFKELNSTVS

  • title: Zn binding site
  • coordinates: H156,E159,H288
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
Chro.10047229 SNSGRSDEDG0.997unspChro.10047250 SNSLVSKCDP0.994unsp

Chro.10047      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India