Chro.10092 | similar to ash2

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_IDPredictionOTHERSPmTPCS_Position
Chro.10092OTHER0.9999110.0000360.000053
No Results

  • Fasta :-

    >Chro.10092 MTENSVKIESHSKKETISHLNESASRSNPRKKSRKNTGKDNKVDNFDSPVFSVRYKDPSI ELSEDRLTAVGYKGWSTVLLTHGASSGVWYFEITVLEPRVISKFLGHSKFLNLKQDPSIR
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/564 Sequence name : 564 Sequence length : 120 VALUES OF COMPUTED PARAMETERS Coef20 : 3.577 CoefTot : 0.000 ChDiff : 6 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.318 0.729 -0.067 0.474 MesoH : -0.950 -0.006 -0.514 0.128 MuHd_075 : 23.401 10.714 5.236 3.540 MuHd_095 : 23.566 13.517 7.235 3.782 MuHd_100 : 22.244 10.426 7.000 3.245 MuHd_105 : 17.620 5.263 5.630 2.355 Hmax_075 : 0.262 1.137 -3.187 0.840 Hmax_095 : -4.100 1.050 -3.221 0.691 Hmax_100 : 1.900 -0.100 -1.739 0.840 Hmax_105 : -2.333 -0.233 -2.479 0.150 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8630 0.1370 DFMC : 0.6282 0.3718
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 120 Chro.10092 MTENSVKIESHSKKETISHLNESASRSNPRKKSRKNTGKDNKVDNFDSPVFSVRYKDPSIELSEDRLTAVGYKGWSTVLL 80 THGASSGVWYFEITVLEPRVISKFLGHSKFLNLKQDPSIR 160 ................................................................................ 80 ........................................ 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Chro.10092 7 MTENSVK|IE 0.065 . Chro.10092 13 KIESHSK|KE 0.057 . Chro.10092 14 IESHSKK|ET 0.190 . Chro.10092 26 LNESASR|SN 0.093 . Chro.10092 30 ASRSNPR|KK 0.119 . Chro.10092 31 SRSNPRK|KS 0.136 . Chro.10092 32 RSNPRKK|SR 0.195 . Chro.10092 34 NPRKKSR|KN 0.130 . Chro.10092 35 PRKKSRK|NT 0.138 . Chro.10092 39 SRKNTGK|DN 0.084 . Chro.10092 42 NTGKDNK|VD 0.055 . Chro.10092 54 SPVFSVR|YK 0.144 . Chro.10092 56 VFSVRYK|DP 0.089 . Chro.10092 66 IELSEDR|LT 0.083 . Chro.10092 73 LTAVGYK|GW 0.089 . Chro.10092 99 ITVLEPR|VI 0.102 . Chro.10092 103 EPRVISK|FL 0.094 . Chro.10092 109 KFLGHSK|FL 0.067 . Chro.10092 114 SKFLNLK|QD 0.059 . Chro.10092 120 KQDPSIR|-- 0.097 . ____________________________^_________________

  • Fasta :-

    >Chro.10092 ATGACAGAAAATTCAGTCAAAATCGAGTCTCATTCAAAGAAAGAAACAATTTCTCATTTG AATGAATCGGCAAGTAGAAGCAATCCCAGAAAGAAAAGCAGAAAAAACACAGGAAAGGAC AACAAGGTTGATAATTTTGATTCTCCCGTATTCTCAGTTAGGTATAAGGATCCATCAATA GAGTTATCAGAAGATAGATTAACAGCTGTGGGGTATAAAGGTTGGTCAACAGTTTTGTTA ACGCACGGTGCAAGTTCTGGAGTTTGGTATTTTGAAATCACAGTTTTAGAACCACGGGTT ATTTCCAAGTTTTTAGGCCATTCTAAGTTTTTAAATTTGAAACAAGACCCCAGTATAAGG TAA
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  • Fasta :-

    MTENSVKIESHSKKETISHLNESASRSNPRKKSRKNTGKDNKVDNFDSPVFSVRYKDPSI ELSEDRLTAVGYKGWSTVLLTHGASSGVWYFEITVLEPRVISKFLGHSKFLNLKQDPSIR

    No Results
IDSitePositionGscoreIscore
Chro.10092T20.5930.432
IDSitePositionGscoreIscore
Chro.10092T20.5930.432
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
Chro.1009259 SYKDPSIELS0.994unspChro.1009259 SYKDPSIELS0.994unspChro.1009259 SYKDPSIELS0.994unspChro.1009212 SIESHSKKET0.998unspChro.1009233 SPRKKSRKNT0.997unsp

Chro.10092      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India