Chro.10193 | hypothetical protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003824      GO:0046872      

  • Computed_GO_Functions:  catalytic activity      metal ion binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
Chro.10193OTHER0.9991700.0000660.000763
No Results

  • Fasta :-

    >Chro.10193 MLIIKSLQTNGEYTEWEYRSFINRMFVEIENQNQNQNPSKNRHKFISFILEYTQTILGSS SNEGYNKCELFNSWAYKLLHRQSIIAYLQGNISKNKSLYLIEKFVLNSKILSLNDKYSMK KKIHKLTRPIDIALINPVVEDINNTVLAFYQFGVPSFEEKLHLMALQPIIQEYIYDNLRT NKQLGYIIFANIIPISSTRLLVVGVEGDNNNSVEKIESIIRNTLYEFSTRKLGNMESHMF EDIKNSLIQEAKSIGNSFNQKLNHYWDEIRYVGDLSESFNLQRAIDYINNKMTIEHLYNT FNKLINSEERTRSHSTIKAIYYSKTSPEFKKQEFIDKYMNSALSIARMSLKEDDFY
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/831 Sequence name : 831 Sequence length : 356 VALUES OF COMPUTED PARAMETERS Coef20 : 3.678 CoefTot : -0.296 ChDiff : 3 ZoneTo : 11 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.982 1.835 0.160 0.568 MesoH : -0.527 0.471 -0.378 0.285 MuHd_075 : 4.462 8.549 2.610 3.631 MuHd_095 : 13.000 10.964 5.967 3.232 MuHd_100 : 13.193 10.008 5.770 2.953 MuHd_105 : 15.931 10.341 5.602 3.204 Hmax_075 : 3.100 3.800 -0.810 3.410 Hmax_095 : 5.250 6.900 -0.174 3.850 Hmax_100 : 5.700 6.900 0.268 3.850 Hmax_105 : 10.383 5.950 0.153 3.897 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9761 0.0239 DFMC : 0.9861 0.0139
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 356 Chro.10193 MLIIKSLQTNGEYTEWEYRSFINRMFVEIENQNQNQNPSKNRHKFISFILEYTQTILGSSSNEGYNKCELFNSWAYKLLH 80 RQSIIAYLQGNISKNKSLYLIEKFVLNSKILSLNDKYSMKKKIHKLTRPIDIALINPVVEDINNTVLAFYQFGVPSFEEK 160 LHLMALQPIIQEYIYDNLRTNKQLGYIIFANIIPISSTRLLVVGVEGDNNNSVEKIESIIRNTLYEFSTRKLGNMESHMF 240 EDIKNSLIQEAKSIGNSFNQKLNHYWDEIRYVGDLSESFNLQRAIDYINNKMTIEHLYNTFNKLINSEERTRSHSTIKAI 320 YYSKTSPEFKKQEFIDKYMNSALSIARMSLKEDDFY 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Chro.10193 5 --MLIIK|SL 0.078 . Chro.10193 19 YTEWEYR|SF 0.102 . Chro.10193 24 YRSFINR|MF 0.159 . Chro.10193 40 QNQNPSK|NR 0.068 . Chro.10193 42 QNPSKNR|HK 0.102 . Chro.10193 44 PSKNRHK|FI 0.097 . Chro.10193 67 SNEGYNK|CE 0.054 . Chro.10193 77 FNSWAYK|LL 0.079 . Chro.10193 81 AYKLLHR|QS 0.081 . Chro.10193 94 LQGNISK|NK 0.066 . Chro.10193 96 GNISKNK|SL 0.101 . Chro.10193 103 SLYLIEK|FV 0.076 . Chro.10193 109 KFVLNSK|IL 0.058 . Chro.10193 116 ILSLNDK|YS 0.078 . Chro.10193 120 NDKYSMK|KK 0.069 . Chro.10193 121 DKYSMKK|KI 0.102 . Chro.10193 122 KYSMKKK|IH 0.110 . Chro.10193 125 MKKKIHK|LT 0.072 . Chro.10193 128 KIHKLTR|PI 0.153 . Chro.10193 160 VPSFEEK|LH 0.068 . Chro.10193 179 YIYDNLR|TN 0.070 . Chro.10193 182 DNLRTNK|QL 0.162 . Chro.10193 199 IPISSTR|LL 0.092 . Chro.10193 215 NNNSVEK|IE 0.079 . Chro.10193 221 KIESIIR|NT 0.074 . Chro.10193 230 LYEFSTR|KL 0.116 . Chro.10193 231 YEFSTRK|LG 0.069 . Chro.10193 244 HMFEDIK|NS 0.062 . Chro.10193 252 SLIQEAK|SI 0.136 . Chro.10193 261 GNSFNQK|LN 0.067 . Chro.10193 270 HYWDEIR|YV 0.139 . Chro.10193 283 ESFNLQR|AI 0.105 . Chro.10193 291 IDYINNK|MT 0.069 . Chro.10193 303 LYNTFNK|LI 0.082 . Chro.10193 310 LINSEER|TR 0.086 . Chro.10193 312 NSEERTR|SH 0.121 . Chro.10193 318 RSHSTIK|AI 0.079 . Chro.10193 324 KAIYYSK|TS 0.058 . Chro.10193 330 KTSPEFK|KQ 0.074 . Chro.10193 331 TSPEFKK|QE 0.102 . Chro.10193 337 KQEFIDK|YM 0.071 . Chro.10193 347 SALSIAR|MS 0.080 . Chro.10193 351 IARMSLK|ED 0.067 . ____________________________^_________________

  • Fasta :-

    >Chro.10193 ATGTTAATAATTAAGTCATTGCAAACCAATGGAGAATACACTGAGTGGGAATATAGAAGC TTTATTAACAGAATGTTCGTTGAAATAGAAAATCAAAATCAAAATCAAAATCCCAGCAAA AATAGACATAAATTTATTTCATTCATACTTGAATATACACAAACAATTTTGGGTTCAAGT TCAAATGAAGGCTACAATAAATGCGAATTGTTTAATAGTTGGGCATACAAGCTATTACAT AGACAATCAATTATTGCATATTTACAGGGAAATATTTCCAAGAATAAATCTTTGTATTTA ATTGAGAAGTTTGTATTAAATAGCAAAATTTTATCACTTAATGATAAATATTCAATGAAA AAGAAAATCCACAAACTTACAAGGCCGATTGATATTGCCTTAATAAATCCAGTTGTTGAG GATATTAATAACACTGTATTAGCATTTTATCAGTTTGGAGTCCCATCTTTTGAAGAAAAA TTACATTTAATGGCATTACAACCAATTATTCAAGAATATATTTATGACAATTTGAGGACA AACAAACAATTAGGATATATTATTTTTGCAAACATTATCCCTATAAGTAGTACCAGGTTG TTGGTTGTAGGAGTTGAGGGAGACAACAATAATTCTGTTGAAAAAATTGAGTCGATTATA CGTAATACATTATACGAGTTTTCAACCAGAAAGCTAGGAAATATGGAAAGTCACATGTTT GAAGATATTAAAAACTCATTAATACAAGAAGCAAAATCAATAGGGAATTCATTCAATCAG AAGCTTAACCATTACTGGGATGAAATTCGTTACGTAGGCGACCTCTCAGAGAGTTTTAAT CTACAAAGAGCAATAGATTATATTAATAATAAAATGACTATTGAACACCTATACAACACA TTCAACAAACTGATCAATTCTGAAGAACGTACAAGGTCTCATTCAACAATAAAGGCTATT TACTACTCCAAAACTTCGCCAGAGTTTAAGAAACAAGAATTTATTGATAAATATATGAAC AGTGCGTTGAGCATAGCTCGTATGTCTTTGAAAGAAGACGATTTCTATTAA
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  • Fasta :-

    MLIIKSLQTNGEYTEWEYRSFINRMFVEIENQNQNQNPSKNRHKFISFILEYTQTILGSS SNEGYNKCELFNSWAYKLLHRQSIIAYLQGNISKNKSLYLIEKFVLNSKILSLNDKYSMK KKIHKLTRPIDIALINPVVEDINNTVLAFYQFGVPSFEEKLHLMALQPIIQEYIYDNLRT NKQLGYIIFANIIPISSTRLLVVGVEGDNNNSVEKIESIIRNTLYEFSTRKLGNMESHMF EDIKNSLIQEAKSIGNSFNQKLNHYWDEIRYVGDLSESFNLQRAIDYINNKMTIEHLYNT FNKLINSEERTRSHSTIKAIYYSKTSPEFKKQEFIDKYMNSALSIARMSLKEDDFY

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
Chro.10193326 SYSKTSPEFK0.996unspChro.10193326 SYSKTSPEFK0.996unspChro.10193326 SYSKTSPEFK0.996unspChro.10193349 SIARMSLKED0.998unspChro.10193253 SQEAKSIGNS0.994unspChro.10193315 STRSHSTIKA0.997unsp

Chro.10193      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India