Chro.10305 | methionine aminopeptidase 1 (MetAP 1) (MAP 1) (Peptidase M 1)

_IDPredictionOTHERSPmTPCS_Position
Chro.10305OTHER0.9999730.0000180.000009
No Results

  • Fasta :-

    >Chro.10305 MTDNTDELNESKIFSCEGCGSKTKSKLSCPQCKKLGLKTSFFCSQVCFKENWAIHKLKHQ LGGSNKEVAKVSLDLVKKNVILDDPRTWVNCSHISKFIGFNGFTGPLRPYPISIKRKVPS HILRPDYADDKEGRPFSELKRKKSSVIVTATAEEIELLRECCKIGREALDIAASMIKPGV TTDAIDEAVHNFIISKNSYPSPLNYWGFPKSCCTSVNEIICHGIPDFRPLEEGDIVNVDI SVYYKGVHSDLNETFPVGKVDEKSMKLMKVAYQCLEESIKICKPGTMYREIGNLIQSICD KQGFSVVKTYCGHGVGALFHCAPNVPHYKNNKAVGTMKTGHVFTIEPMINAGRFEDITWP DDWTSATLDGSRSAQFEHTLLITETGVEVLTKRLESSPKLEILSEIE
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/135 Sequence name : 135 Sequence length : 407 VALUES OF COMPUTED PARAMETERS Coef20 : 3.171 CoefTot : 0.000 ChDiff : 1 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.876 0.871 0.034 0.456 MesoH : -0.638 0.177 -0.366 0.190 MuHd_075 : 19.531 5.540 3.793 3.049 MuHd_095 : 18.587 9.977 4.862 1.246 MuHd_100 : 27.960 10.045 6.457 1.392 MuHd_105 : 31.846 8.256 6.343 2.562 Hmax_075 : 1.167 4.317 -2.094 3.057 Hmax_095 : -3.600 0.962 -2.621 0.315 Hmax_100 : -2.700 0.100 -2.237 0.900 Hmax_105 : -0.787 0.300 -2.840 1.720 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9729 0.0271 DFMC : 0.9485 0.0515
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 407 Chro.10305 MTDNTDELNESKIFSCEGCGSKTKSKLSCPQCKKLGLKTSFFCSQVCFKENWAIHKLKHQLGGSNKEVAKVSLDLVKKNV 80 ILDDPRTWVNCSHISKFIGFNGFTGPLRPYPISIKRKVPSHILRPDYADDKEGRPFSELKRKKSSVIVTATAEEIELLRE 160 CCKIGREALDIAASMIKPGVTTDAIDEAVHNFIISKNSYPSPLNYWGFPKSCCTSVNEIICHGIPDFRPLEEGDIVNVDI 240 SVYYKGVHSDLNETFPVGKVDEKSMKLMKVAYQCLEESIKICKPGTMYREIGNLIQSICDKQGFSVVKTYCGHGVGALFH 320 CAPNVPHYKNNKAVGTMKTGHVFTIEPMINAGRFEDITWPDDWTSATLDGSRSAQFEHTLLITETGVEVLTKRLESSPKL 400 EILSEIE 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ....... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Chro.10305 12 DELNESK|IF 0.063 . Chro.10305 22 CEGCGSK|TK 0.055 . Chro.10305 24 GCGSKTK|SK 0.073 . Chro.10305 26 GSKTKSK|LS 0.070 . Chro.10305 33 LSCPQCK|KL 0.079 . Chro.10305 34 SCPQCKK|LG 0.063 . Chro.10305 38 CKKLGLK|TS 0.055 . Chro.10305 49 CSQVCFK|EN 0.071 . Chro.10305 56 ENWAIHK|LK 0.068 . Chro.10305 58 WAIHKLK|HQ 0.074 . Chro.10305 66 QLGGSNK|EV 0.077 . Chro.10305 70 SNKEVAK|VS 0.064 . Chro.10305 77 VSLDLVK|KN 0.056 . Chro.10305 78 SLDLVKK|NV 0.097 . Chro.10305 86 VILDDPR|TW 0.068 . Chro.10305 96 NCSHISK|FI 0.106 . Chro.10305 108 GFTGPLR|PY 0.077 . Chro.10305 115 PYPISIK|RK 0.052 . Chro.10305 116 YPISIKR|KV 0.191 . Chro.10305 117 PISIKRK|VP 0.117 . Chro.10305 124 VPSHILR|PD 0.100 . Chro.10305 131 PDYADDK|EG 0.055 . Chro.10305 134 ADDKEGR|PF 0.088 . Chro.10305 140 RPFSELK|RK 0.059 . Chro.10305 141 PFSELKR|KK 0.204 . Chro.10305 142 FSELKRK|KS 0.111 . Chro.10305 143 SELKRKK|SS 0.181 . Chro.10305 159 EEIELLR|EC 0.081 . Chro.10305 163 LLRECCK|IG 0.071 . Chro.10305 166 ECCKIGR|EA 0.095 . Chro.10305 177 IAASMIK|PG 0.056 . Chro.10305 196 HNFIISK|NS 0.062 . Chro.10305 210 NYWGFPK|SC 0.093 . Chro.10305 228 HGIPDFR|PL 0.092 . Chro.10305 245 DISVYYK|GV 0.097 . Chro.10305 259 ETFPVGK|VD 0.066 . Chro.10305 263 VGKVDEK|SM 0.066 . Chro.10305 266 VDEKSMK|LM 0.063 . Chro.10305 269 KSMKLMK|VA 0.081 . Chro.10305 280 CLEESIK|IC 0.063 . Chro.10305 283 ESIKICK|PG 0.060 . Chro.10305 289 KPGTMYR|EI 0.138 . Chro.10305 301 IQSICDK|QG 0.076 . Chro.10305 308 QGFSVVK|TY 0.069 . Chro.10305 329 PNVPHYK|NN 0.075 . Chro.10305 332 PHYKNNK|AV 0.097 . Chro.10305 338 KAVGTMK|TG 0.060 . Chro.10305 353 PMINAGR|FE 0.084 . Chro.10305 372 ATLDGSR|SA 0.095 . Chro.10305 392 GVEVLTK|RL 0.067 . Chro.10305 393 VEVLTKR|LE 0.099 . Chro.10305 399 RLESSPK|LE 0.063 . ____________________________^_________________

  • Fasta :-

    >Chro.10305 ATGACGGATAATACTGATGAGTTAAATGAGTCCAAGATTTTTTCATGCGAAGGCTGTGGT TCCAAAACAAAATCAAAATTATCATGTCCTCAATGCAAGAAGTTGGGACTAAAGACATCT TTTTTTTGTTCCCAAGTCTGCTTTAAAGAAAACTGGGCCATTCATAAACTAAAACATCAA TTAGGAGGAAGTAATAAAGAAGTTGCTAAAGTTTCTCTTGACTTGGTTAAAAAGAATGTA ATCCTAGACGATCCTAGAACATGGGTTAATTGCTCACATATTTCAAAGTTTATAGGCTTT AATGGTTTCACAGGCCCTTTAAGACCCTATCCAATAAGTATTAAACGAAAGGTTCCAAGC CATATCTTGAGGCCAGACTACGCTGATGATAAGGAGGGAAGACCATTTTCTGAATTAAAA AGAAAAAAAAGTTCTGTAATTGTTACAGCAACAGCTGAAGAAATTGAGCTCCTTAGAGAA TGTTGTAAGATAGGAAGAGAAGCTCTGGATATTGCTGCTTCTATGATAAAACCTGGAGTA ACAACTGATGCTATTGATGAAGCTGTTCATAATTTCATTATTTCTAAAAACTCTTATCCT TCTCCATTGAATTATTGGGGGTTTCCAAAGTCATGTTGCACCTCTGTTAATGAGATAATA TGCCATGGGATCCCTGATTTCAGGCCATTGGAGGAGGGAGATATTGTAAATGTTGACATT TCTGTATATTATAAAGGAGTACACTCGGATTTAAATGAAACGTTTCCGGTTGGAAAAGTT GACGAGAAATCAATGAAATTAATGAAAGTGGCTTATCAATGCTTAGAGGAAAGTATCAAG ATTTGCAAGCCTGGTACAATGTACAGAGAAATAGGCAATCTGATTCAGTCAATTTGTGAT AAACAAGGCTTTTCTGTTGTAAAAACTTACTGTGGGCATGGAGTTGGAGCTTTATTTCAT TGTGCTCCTAATGTGCCTCATTATAAGAATAACAAGGCCGTCGGAACTATGAAAACAGGA CATGTATTTACAATTGAACCAATGATTAATGCAGGTAGATTTGAAGATATAACTTGGCCA GATGATTGGACATCGGCAACATTAGATGGAAGCAGATCCGCTCAATTTGAACATACTTTG TTGATTACCGAGACTGGAGTAGAAGTTTTGACTAAAAGATTGGAAAGCTCACCTAAACTT GAAATTCTTTCTGAAATAGAGTAA
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  • Fasta :-

    MTDNTDELNESKIFSCEGCGSKTKSKLSCPQCKKLGLKTSFFCSQVCFKENWAIHKLKHQ LGGSNKEVAKVSLDLVKKNVILDDPRTWVNCSHISKFIGFNGFTGPLRPYPISIKRKVPS HILRPDYADDKEGRPFSELKRKKSSVIVTATAEEIELLRECCKIGREALDIAASMIKPGV TTDAIDEAVHNFIISKNSYPSPLNYWGFPKSCCTSVNEIICHGIPDFRPLEEGDIVNVDI SVYYKGVHSDLNETFPVGKVDEKSMKLMKVAYQCLEESIKICKPGTMYREIGNLIQSICD KQGFSVVKTYCGHGVGALFHCAPNVPHYKNNKAVGTMKTGHVFTIEPMINAGRFEDITWP DDWTSATLDGSRSAQFEHTLLITETGVEVLTKRLESSPKLEILSEIE

  • title: active site
  • coordinates: H222,D239,D250,H313,E346,E377
No Results
No Results
No Results

Chro.10305      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India