Chro.10416 | aspartyl (acid) protease

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
Chro.10416SP0.0077120.9917750.000513CS pos: 26-27. VEA-RI. Pr: 0.5720
No Results

  • Fasta :-

    >Chro.10416 MNMMKILIATLGGAILFGCSFSRVEARIQMKAYGSIVSTAYYYSDIFIGLPEPQRQSVIL DTGSNLLAFSSTQCQQCGTHLDAYYDPFKSITKREVPCHSYCKVCVNNKKQCAYTIHYLE GSSLSGSYFEDFVAIRNEKGINSEPSPYVVGLSTIFGGITHETNLFFTQAASGILGLAYT ASSQERAPLFQTWTKRSKYAKDAILSLCFSSEGGMISFGGYNSEYWVLGSNDKSFRSTSE ANLFERALGYSFLSSSSNSQSRSNSRGNNLDSKIGWTPLSILNGNYYVQLTKVSVYQTKL TLHKDSSSGNTKPIPLVIDSGTTLSYFPEHIFIQILNVINQRIAETENKSTFRSLIEAGS KFLEYTGLKSSSSQNELELGIKQISIFPGEVPGAALLRKRVYRRLNNIEDIVNTFNSTVH PENFSDEDIESSNNQLNNSNEVSNHFNQTTTSTTTSTINTLFSSQEFDIDSSVSRIMLET SKGERCWKLRDPNEMSRFPTITLGFPGLKVEWEPAQYLYKKYRNTYCLGFDSDKSFLVLG ASFFINKDVIIDVKNSRASFVKSNCPQIAHARRTSTSEMSQLLKDASSSSPESIMKSEVV VFDSNTKHINIENGNSNNNNNNNNSQSLNLSSGTSSKNPPNYRHSADNDTISESHWEPKN LTSPSSLSSYLSQSAVQYIGVTNHSVDYYNQSINYENLGNNDMLILYLKQQLHDIDDIAD NTGNPQIQKNLQDANNSPSDSKNENQDANSDNKDSSSRYSNSQPTIIHWLIILLTALFSC YLFNGVDQKDAKTE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/87 Sequence name : 87 Sequence length : 794 VALUES OF COMPUTED PARAMETERS Coef20 : 4.230 CoefTot : -0.475 ChDiff : -9 ZoneTo : 44 KR : 4 DE : 1 CleavSite : 25 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.100 2.188 0.479 0.803 MesoH : -0.066 0.469 -0.193 0.260 MuHd_075 : 20.736 15.849 4.518 5.903 MuHd_095 : 25.301 16.716 6.794 7.984 MuHd_100 : 19.592 12.835 4.893 6.234 MuHd_105 : 19.783 14.619 4.411 6.412 Hmax_075 : 17.938 17.763 1.372 5.520 Hmax_095 : 6.213 13.500 5.290 4.800 Hmax_100 : 6.500 9.400 3.751 4.800 Hmax_105 : 18.100 20.800 3.401 7.100 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6997 0.3003 DFMC : 0.8688 0.1312
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 794 Chro.10416 MNMMKILIATLGGAILFGCSFSRVEARIQMKAYGSIVSTAYYYSDIFIGLPEPQRQSVILDTGSNLLAFSSTQCQQCGTH 80 LDAYYDPFKSITKREVPCHSYCKVCVNNKKQCAYTIHYLEGSSLSGSYFEDFVAIRNEKGINSEPSPYVVGLSTIFGGIT 160 HETNLFFTQAASGILGLAYTASSQERAPLFQTWTKRSKYAKDAILSLCFSSEGGMISFGGYNSEYWVLGSNDKSFRSTSE 240 ANLFERALGYSFLSSSSNSQSRSNSRGNNLDSKIGWTPLSILNGNYYVQLTKVSVYQTKLTLHKDSSSGNTKPIPLVIDS 320 GTTLSYFPEHIFIQILNVINQRIAETENKSTFRSLIEAGSKFLEYTGLKSSSSQNELELGIKQISIFPGEVPGAALLRKR 400 VYRRLNNIEDIVNTFNSTVHPENFSDEDIESSNNQLNNSNEVSNHFNQTTTSTTTSTINTLFSSQEFDIDSSVSRIMLET 480 SKGERCWKLRDPNEMSRFPTITLGFPGLKVEWEPAQYLYKKYRNTYCLGFDSDKSFLVLGASFFINKDVIIDVKNSRASF 560 VKSNCPQIAHARRTSTSEMSQLLKDASSSSPESIMKSEVVVFDSNTKHINIENGNSNNNNNNNNSQSLNLSSGTSSKNPP 640 NYRHSADNDTISESHWEPKNLTSPSSLSSYLSQSAVQYIGVTNHSVDYYNQSINYENLGNNDMLILYLKQQLHDIDDIAD 720 NTGNPQIQKNLQDANNSPSDSKNENQDANSDNKDSSSRYSNSQPTIIHWLIILLTALFSCYLFNGVDQKDAKTE 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 .......................................................................... 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Chro.10416 5 --MNMMK|IL 0.071 . Chro.10416 23 FGCSFSR|VE 0.075 . Chro.10416 27 FSRVEAR|IQ 0.138 . Chro.10416 31 EARIQMK|AY 0.088 . Chro.10416 55 GLPEPQR|QS 0.072 . Chro.10416 89 AYYDPFK|SI 0.082 . Chro.10416 93 PFKSITK|RE 0.051 . Chro.10416 94 FKSITKR|EV 0.286 . Chro.10416 103 PCHSYCK|VC 0.056 . Chro.10416 109 KVCVNNK|KQ 0.059 . Chro.10416 110 VCVNNKK|QC 0.090 . Chro.10416 136 EDFVAIR|NE 0.072 . Chro.10416 139 VAIRNEK|GI 0.115 . Chro.10416 186 TASSQER|AP 0.112 . Chro.10416 195 LFQTWTK|RS 0.060 . Chro.10416 196 FQTWTKR|SK 0.275 . Chro.10416 198 TWTKRSK|YA 0.086 . Chro.10416 201 KRSKYAK|DA 0.157 . Chro.10416 233 VLGSNDK|SF 0.065 . Chro.10416 236 SNDKSFR|ST 0.200 . Chro.10416 246 EANLFER|AL 0.133 . Chro.10416 262 SSNSQSR|SN 0.215 . Chro.10416 266 QSRSNSR|GN 0.080 . Chro.10416 273 GNNLDSK|IG 0.064 . Chro.10416 292 YYVQLTK|VS 0.053 . Chro.10416 299 VSVYQTK|LT 0.067 . Chro.10416 304 TKLTLHK|DS 0.078 . Chro.10416 312 SSSGNTK|PI 0.079 . Chro.10416 342 LNVINQR|IA 0.112 . Chro.10416 349 IAETENK|ST 0.086 . Chro.10416 353 ENKSTFR|SL 0.158 . Chro.10416 361 LIEAGSK|FL 0.063 . Chro.10416 369 LEYTGLK|SS 0.072 . Chro.10416 382 ELELGIK|QI 0.064 . Chro.10416 398 PGAALLR|KR 0.066 . Chro.10416 399 GAALLRK|RV 0.110 . Chro.10416 400 AALLRKR|VY 0.125 . Chro.10416 403 LRKRVYR|RL 0.425 . Chro.10416 404 RKRVYRR|LN 0.132 . Chro.10416 475 IDSSVSR|IM 0.087 . Chro.10416 482 IMLETSK|GE 0.054 . Chro.10416 485 ETSKGER|CW 0.077 . Chro.10416 488 KGERCWK|LR 0.140 . Chro.10416 490 ERCWKLR|DP 0.109 . Chro.10416 497 DPNEMSR|FP 0.097 . Chro.10416 509 LGFPGLK|VE 0.051 . Chro.10416 520 PAQYLYK|KY 0.059 . Chro.10416 521 AQYLYKK|YR 0.107 . Chro.10416 523 YLYKKYR|NT 0.120 . Chro.10416 534 LGFDSDK|SF 0.071 . Chro.10416 547 ASFFINK|DV 0.085 . Chro.10416 554 DVIIDVK|NS 0.058 . Chro.10416 557 IDVKNSR|AS 0.085 . Chro.10416 562 SRASFVK|SN 0.150 . Chro.10416 572 PQIAHAR|RT 0.143 . Chro.10416 573 QIAHARR|TS 0.159 . Chro.10416 584 EMSQLLK|DA 0.085 . Chro.10416 596 SPESIMK|SE 0.083 . Chro.10416 607 VFDSNTK|HI 0.060 . Chro.10416 637 SSGTSSK|NP 0.066 . Chro.10416 643 KNPPNYR|HS 0.091 . Chro.10416 659 ESHWEPK|NL 0.067 . Chro.10416 709 MLILYLK|QQ 0.060 . Chro.10416 729 GNPQIQK|NL 0.067 . Chro.10416 742 NSPSDSK|NE 0.056 . Chro.10416 753 DANSDNK|DS 0.069 . Chro.10416 758 NKDSSSR|YS 0.096 . Chro.10416 789 FNGVDQK|DA 0.089 . Chro.10416 792 VDQKDAK|TE 0.065 . ____________________________^_________________

  • Fasta :-

    >Chro.10416 ATGAATATGATGAAAATACTTATTGCTACCCTGGGAGGAGCAATTCTATTTGGATGTAGC TTCTCAAGGGTTGAAGCAAGAATTCAAATGAAGGCTTATGGTAGTATTGTTTCAACAGCC TATTATTATTCCGATATTTTTATTGGACTTCCAGAACCTCAGAGACAGAGTGTTATTTTG GATACAGGAAGTAACCTTCTTGCTTTCAGTAGTACTCAATGTCAACAGTGTGGGACACAC CTTGATGCATATTATGACCCTTTTAAAAGTATAACAAAAAGGGAAGTCCCATGCCATTCT TATTGCAAAGTTTGTGTGAATAATAAAAAGCAATGCGCTTATACTATTCATTATTTAGAA GGAAGCAGTTTATCAGGAAGTTACTTTGAGGATTTTGTTGCAATCAGAAATGAAAAAGGA ATTAATTCTGAGCCTTCACCATATGTTGTTGGATTATCAACCATTTTTGGTGGAATTACT CATGAAACTAATCTATTCTTTACTCAAGCAGCTTCTGGAATTCTTGGATTAGCTTATACT GCAAGTTCTCAAGAAAGGGCACCATTATTCCAAACATGGACAAAAAGATCTAAATATGCT AAAGATGCTATTTTATCTTTATGCTTTAGTTCAGAAGGTGGTATGATTTCTTTTGGTGGT TATAATTCTGAATATTGGGTTTTAGGATCCAATGATAAATCATTTAGGTCTACTTCTGAA GCTAATTTGTTTGAAAGAGCACTTGGATATTCATTTTTATCAAGTTCTAGTAATAGTCAA TCACGTTCGAATTCAAGAGGAAATAATTTGGATTCAAAAATTGGTTGGACTCCTTTATCT ATTTTGAATGGAAATTATTATGTTCAATTAACTAAAGTAAGTGTTTATCAAACTAAATTA ACTTTGCATAAAGATTCATCATCTGGTAATACAAAACCTATTCCACTTGTTATTGATAGT GGTACAACATTATCATATTTCCCTGAACATATTTTTATTCAAATATTGAACGTTATTAAT CAAAGAATTGCAGAAACTGAAAATAAGTCAACTTTTAGAAGTCTTATTGAAGCCGGCTCT AAATTTTTGGAATATACTGGTCTTAAATCATCATCGTCTCAAAATGAATTGGAGTTAGGA ATTAAACAAATTTCAATTTTCCCTGGTGAAGTTCCTGGTGCTGCATTACTTAGAAAAAGA GTATATAGAAGGCTTAATAATATTGAAGATATTGTTAATACTTTTAATTCAACTGTACAT CCTGAGAATTTTAGTGATGAGGATATTGAATCAAGTAACAATCAGTTAAATAATAGTAAT GAAGTTTCAAATCATTTTAATCAAACAACAACTAGTACTACTACTTCTACTATTAACACA TTATTCTCTTCACAAGAATTTGATATTGATTCTTCAGTATCAAGGATAATGCTTGAAACA TCAAAAGGTGAAAGATGTTGGAAATTAAGAGATCCAAATGAAATGTCACGTTTCCCAACT ATTACTTTAGGATTCCCAGGTTTAAAGGTTGAATGGGAACCAGCTCAATATCTTTACAAA AAATACAGAAATACTTATTGTTTAGGATTTGATTCTGATAAATCATTCTTAGTACTTGGT GCATCATTCTTCATTAATAAGGATGTTATTATTGATGTAAAAAATTCAAGAGCTTCATTT GTCAAGTCGAATTGTCCCCAAATTGCACATGCAAGAAGAACTTCTACATCTGAGATGTCT CAATTATTAAAAGATGCATCATCATCATCGCCAGAATCAATTATGAAATCTGAAGTTGTA GTATTTGATTCAAATACAAAACATATAAATATTGAAAATGGTAATAGTAATAATAATAAT AATAATAATAATAGTCAAAGTCTTAATTTAAGTTCTGGTACATCTAGTAAAAATCCACCA AATTATAGACATAGTGCAGATAATGATACAATTTCAGAATCGCATTGGGAGCCAAAAAAC TTGACTTCGCCATCCTCACTCTCCTCGTATTTATCTCAATCAGCTGTACAATATATTGGT GTTACAAATCATTCAGTTGATTACTATAATCAAAGTATTAATTATGAAAATTTAGGAAAC AATGATATGCTGATATTATATTTAAAGCAACAATTACATGATATTGACGATATTGCTGAT AATACTGGTAATCCTCAAATTCAAAAGAATCTTCAGGATGCTAATAATTCTCCATCAGAT TCTAAAAATGAGAATCAAGATGCTAATTCGGATAATAAAGATTCTTCATCAAGATATAGT AATTCTCAACCAACAATAATACATTGGTTGATTATTTTACTTACTGCTTTATTTTCATGT TATTTATTTAATGGTGTAGATCAGAAGGATGCCAAGACTGAGTAA
  • Download Fasta

  • Fasta :-

    MNMMKILIATLGGAILFGCSFSRVEARIQMKAYGSIVSTAYYYSDIFIGLPEPQRQSVIL DTGSNLLAFSSTQCQQCGTHLDAYYDPFKSITKREVPCHSYCKVCVNNKKQCAYTIHYLE GSSLSGSYFEDFVAIRNEKGINSEPSPYVVGLSTIFGGITHETNLFFTQAASGILGLAYT ASSQERAPLFQTWTKRSKYAKDAILSLCFSSEGGMISFGGYNSEYWVLGSNDKSFRSTSE ANLFERALGYSFLSSSSNSQSRSNSRGNNLDSKIGWTPLSILNGNYYVQLTKVSVYQTKL TLHKDSSSGNTKPIPLVIDSGTTLSYFPEHIFIQILNVINQRIAETENKSTFRSLIEAGS KFLEYTGLKSSSSQNELELGIKQISIFPGEVPGAALLRKRVYRRLNNIEDIVNTFNSTVH PENFSDEDIESSNNQLNNSNEVSNHFNQTTTSTTTSTINTLFSSQEFDIDSSVSRIMLET SKGERCWKLRDPNEMSRFPTITLGFPGLKVEWEPAQYLYKKYRNTYCLGFDSDKSFLVLG ASFFINKDVIIDVKNSRASFVKSNCPQIAHARRTSTSEMSQLLKDASSSSPESIMKSEVV VFDSNTKHINIENGNSNNNNNNNNSQSLNLSSGTSSKNPPNYRHSADNDTISESHWEPKN LTSPSSLSSYLSQSAVQYIGVTNHSVDYYNQSINYENLGNNDMLILYLKQQLHDIDDIAD NTGNPQIQKNLQDANNSPSDSKNENQDANSDNKDSSSRYSNSQPTIIHWLIILLTALFSC YLFNGVDQKDAKTE

  • title: catalytic residue
  • coordinates: D61,D319
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
Chro.10416575 SARRTSTSEM0.997unspChro.10416575 SARRTSTSEM0.997unspChro.10416575 SARRTSTSEM0.997unspChro.10416590 SASSSSPESI0.995unspChro.10416635 SSSGTSSKNP0.993unspChro.10416737 SDANNSPSDS0.996unspChro.10416183 SYTASSQERA0.996unspChro.10416425 SPENFSDEDI0.993unsp

Chro.10416      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India