Chro.30253 | DKFZP547N043 protein

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_IDPredictionOTHERSPmTPCS_Position
Chro.30253OTHER0.9997250.0001170.000158
No Results

  • Fasta :-

    >Chro.30253 MTLCAGKCTYETGGRCIVSLSEPLLKYRSVKELKETILHELIHAYLFLTSNDRDRNFHGK EFCFHMNRINRMSGLNINIYHNFHDELNYYRRYIWRCDGVCRNHPPYYGYVRRSINRKPG PADSWWNFHKKTCGGCFVKEAKTLPQINNLESLDTKPNGQTSSPNMHQDDILEIIEVSD
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/905 Sequence name : 905 Sequence length : 179 VALUES OF COMPUTED PARAMETERS Coef20 : 4.090 CoefTot : -0.257 ChDiff : 4 ZoneTo : 10 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : -0.129 0.741 -0.020 0.382 MesoH : -1.701 -0.293 -0.648 -0.031 MuHd_075 : 23.570 16.615 8.123 4.786 MuHd_095 : 33.076 10.227 8.259 6.023 MuHd_100 : 25.468 4.288 5.796 4.734 MuHd_105 : 16.477 2.386 3.493 3.474 Hmax_075 : 14.700 16.400 6.004 4.610 Hmax_095 : 13.562 9.975 5.655 4.594 Hmax_100 : 12.600 6.600 3.766 4.150 Hmax_105 : 10.733 10.150 3.890 4.678 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6921 0.3079 DFMC : 0.8566 0.1434
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 179 Chro.30253 MTLCAGKCTYETGGRCIVSLSEPLLKYRSVKELKETILHELIHAYLFLTSNDRDRNFHGKEFCFHMNRINRMSGLNINIY 80 HNFHDELNYYRRYIWRCDGVCRNHPPYYGYVRRSINRKPGPADSWWNFHKKTCGGCFVKEAKTLPQINNLESLDTKPNGQ 160 TSSPNMHQDDILEIIEVSD 240 ................................................................................ 80 ................................................................................ 160 ................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Chro.30253 7 MTLCAGK|CT 0.060 . Chro.30253 15 TYETGGR|CI 0.066 . Chro.30253 26 LSEPLLK|YR 0.072 . Chro.30253 28 EPLLKYR|SV 0.190 . Chro.30253 31 LKYRSVK|EL 0.162 . Chro.30253 34 RSVKELK|ET 0.066 . Chro.30253 53 FLTSNDR|DR 0.076 . Chro.30253 55 TSNDRDR|NF 0.166 . Chro.30253 60 DRNFHGK|EF 0.079 . Chro.30253 68 FCFHMNR|IN 0.079 . Chro.30253 71 HMNRINR|MS 0.350 . Chro.30253 91 DELNYYR|RY 0.069 . Chro.30253 92 ELNYYRR|YI 0.184 . Chro.30253 96 YRRYIWR|CD 0.143 . Chro.30253 102 RCDGVCR|NH 0.079 . Chro.30253 112 PYYGYVR|RS 0.072 . Chro.30253 113 YYGYVRR|SI 0.270 . Chro.30253 117 VRRSINR|KP 0.113 . Chro.30253 118 RRSINRK|PG 0.090 . Chro.30253 130 SWWNFHK|KT 0.079 . Chro.30253 131 WWNFHKK|TC 0.175 . Chro.30253 139 CGGCFVK|EA 0.065 . Chro.30253 142 CFVKEAK|TL 0.069 . Chro.30253 156 LESLDTK|PN 0.069 . ____________________________^_________________

  • Fasta :-

    >Chro.30253 ATGACATTGTGCGCAGGTAAATGTACATATGAAACTGGAGGGAGATGCATCGTCAGCCTT TCAGAGCCACTACTAAAGTATAGATCCGTTAAAGAGCTAAAAGAGACAATTTTGCATGAG CTTATTCATGCTTATTTGTTTTTGACATCAAACGATAGAGATCGAAATTTTCACGGGAAG GAGTTCTGCTTTCATATGAACAGAATAAACAGAATGTCTGGCCTAAACATTAATATTTAT CACAACTTCCATGATGAATTGAACTATTATAGAAGGTATATCTGGCGTTGCGATGGTGTT TGTAGAAATCATCCACCCTATTATGGATACGTCCGACGTTCGATCAACAGAAAGCCAGGC CCAGCAGATTCTTGGTGGAATTTTCATAAAAAAACATGCGGAGGTTGTTTTGTCAAGGAG GCCAAAACACTACCTCAAATAAATAATTTGGAGTCACTCGATACAAAGCCTAACGGCCAG ACTTCTAGTCCAAATATGCATCAAGATGATATATTGGAAATTATCGAAGTTAGTGACTAG
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  • Fasta :-

    MTLCAGKCTYETGGRCIVSLSEPLLKYRSVKELKETILHELIHAYLFLTSNDRDRNFHGK EFCFHMNRINRMSGLNINIYHNFHDELNYYRRYIWRCDGVCRNHPPYYGYVRRSINRKPG PADSWWNFHKKTCGGCFVKEAKTLPQINNLESLDTKPNGQTSSPNMHQDDILEIIEVSD

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IDSitePeptideScoreMethod
Chro.3025329 SLKYRSVKEL0.996unsp

Chro.30253      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India